Psyllid ID: psy7108

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700---
Protein Sequence
MTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYSLDSGYVFDPFLLDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIHVLENIRTRDIALTVRSLAEIYLEKLLKFIAAMLEVSKHIEFYVSWVSQILMVLKSPSQTTLVHLQRNLNKKYSDLAKISCQFDDTKFLPPTLFARMRTRGYDIWLWNARGNVYSREHVNLTSEQNKFYRFSCDFNVYTLELISRLGPLRIKPKVEKMETGSSDEESSKDDETEIRVLDEDVPRSSDTGDIQLKSTRMNELGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLGNLVTKDMLEGLYGIYALNIFQVGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLGNLVTRDMLEGLYGIYAEYQTISGYFIKLALKTPHT
Secondary Structure (PSIPRED)
ccEEEEEEEEccEEEEEccccEEEcccccccccccccccccccccccccEEEEEEcccccccEEEEEEccccEEEEEcccccEEEEEccccccEEEEEEcccccEEEEEEccccEEEEEccccEEEEEEEcccccccccccccccHHccccccccEEEEEEcccccEEEEEcccccEEEEEccccEEEEEEEcccccccccccccccEEEEccccccccccccccccccccEEEcccccccccccccccccEEEEEEEEcccccEEEEEccccEEEEEcccccEEccEEEEEEEcccccEEEEcccccEEEEEEEccccccccccEEEccEEccccccccccccHHHHHHHHHHHHHHccccccEEEHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHccccEEEEEEEcccccccccccccccccccEEEEEccccHHHHHHHHHcccccccccccccccccccccccccccEEEEEcccccccccccccEEEEEEEEccccccccccccccccccccccccEEccccccEEEEEEEEEcccccccEEEEEHHHHHHHHccHHHHHHHHHHHHcEEEEEEEEEEEEcccEEHHHHHcccccccEEEEcccccccEEEEEcccccccccEEEEEHHHHHHHHccHHHHHHHHHHHHHHEEEEEEEcEEEEEEEcccccc
Secondary Structure Prediction (SSPRO)
ccccccEEEEEcccccccccEEEccccEEEEEEccccccHHHcccccccEEEEEEcccccccEEEEEccccEEEEEEEcccEEEEEEEcccccEEEEEEcccccEEEEEEcccEEEEEEccccEEEEEEccccccEEEEEccccEEEEcccccccEEEEEEcccccEEEEEccccEEEEEEccccEEEEEEEEccccEEccccccEEEEEEcccccEEEEEcccccccccEEEEEcccccccEEEEEccccccEEEEEEcccccEEEEEccccEEEEEccccEEEEEEEEEccccHHHHHHHHHccHHHHHHHHHHHccHHHHHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHccccEEEEcccccHHHcccHHHHHHcccccccccccHHHHHHHHHHHccccccccccccccccccccccccccccEEEEccccccccccccEEEcccHHHHccccccHHHHHHHHHccccccEEEEccccccccEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHccccccEEEEccccccccEEEEccccccHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc
Coil and Loop (DISEMBL)
mtefgnvslietretheggnvvlklpgvkkgdmaarvlkpevlsghegpvsciefspvlsstgmvsasWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVesaaqvgsvearrdldsgrldtDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYssregillkkFTITQNKSLDGINDFINRRkmtefgnvslietretheggnvvlklpgvkkgdmaarvlkPEVRVFCVKFSPTGQAWVAATTEGVHiysldsgyvfdpflldisitpQSVKEALADKDYAKALMMSLKLNEQGLIIHVLENIRTRDIALTVRSLAEIYLEKLLKFIAAMLEVSKHIEFYVSWVSQILMVLKSPSQTTLVHLQRNLNKKYSDLAKIscqfddtkflpptLFARMRTRGYDIWLWNARGNVYSREHVNLTSEQNKFYRFSCDFNVYTLELISrlgplrikpkvekmetgssdeesskddeteirvldedvprssdtgdiqlkstrmnelglydttaTIDYILNQTGHNSLITLGHSLGTTNVliagslrpeyqtkVRLNVLWAQSAFLGNLVTKDMLEGLYGIYALNIfqvglydttaTIDYILNQTGHNSLITLGHSLGTTNVliagslrpeyqtkVRLNVLWAQSAFLGNLVTRDMLEGLYGIYAEYQTISGYFIKLALKTPHT
Flexible Loop (DISEMBL)
mtefgnvslietretheggnvvlklpgvkkgdmAARVLKPevlsghegpvscIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAqvgsvearrdldsgrldtdlvtreqslkakavsTVCYSADGSCILAAGQSKYICIYSSREGILLKkftitqnksldgindfinrrKMTEFGNVSlietretheggnvvlklpgvkKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYSLDSGYVFDPFLLDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIHVLENIRTRDIALTVRSLAEIYLEKLLKFIAAMLEVSKHIEFYVSWVSQILMVLKSPSQTTLVHLQRNLNKKYSDLAKISCQFDDTKFLPPTLFARMRTRGYDIWLWNARGNVYSREHVNLTSEQNKFYRFSCDFNVYTLELIsrlgplrikpkvekmetgssdeesskddeteirvldedvprssdtgdiqlkstrmnelglyDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLGNLVTKDMLEGLYGIYALNIFQVGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLGNLVTRDMLEGLYGIYAEYQTISGYFIKLALKTPHT
Low Complexity Region (SEG)
MTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYSLDSGYVFDPFLLDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIHVLENIRTRDIALTVRSLAEIYLEKLLKFIAAMLEVSKHIEFYVSWVSQILMVLKSPSQTTLVHLQRNLNKKYSDLAKISCQFDDTKFLPPTLFARMRTRGYDIWLWNARGNVYSREHVNLTSEQNKFYRFSCDFNVYTLELISRLGPLRIKPKVEKMETGssdeesskddeteIRVLDEDVPRSSDTGDIQLKSTRMNELGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLGNLVTKDMLEGLYGIYALNIFQVGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLGNLVTRDMLEGLYGIYAEYQTISGYFIKLALKTPHT
Disordered region (IsUnstruct)
******************GNVVLKLPGVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGS***************LVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYSLDSGYVFDPFLLDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIHVLENIRTRDIALTVRSLAEIYLEKLLKFIAAMLEVSKHIEFYVSWVSQILMVLKSPSQTTLVHLQRNLNKKYSDLAKISCQFDDTKFLPPTLFARMRTRGYDIWLWNARGNVYSREHVNLTSEQNKFYRFSCDFNVYTLELISRLGPLRI**********************************************MNELGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLGNLVTKDMLEGLYGIYALNIFQVGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLGNLVTRDMLEGLYGIYAEYQTISGYFIKLAL*****
Disordered Region (DISOPRED)
MTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYSLDSGYVFDPFLLDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIHVLENIRTRDIALTVRSLAEIYLEKLLKFIAAMLEVSKHIEFYVSWVSQILMVLKSPSQTTLVHLQRNLNKKYSDLAKISCQFDDTKFLPPTLFARMRTRGYDIWLWNAR******************YRFSCDFNVYTLELISRLGPLRI**********************EIRVLDEDVP*SSDTGDIQLKSTRMNELGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLGNLVTKDMLEGLYGIYALNIFQVGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLGNLVTRDMLEGLYGIYAEYQTISGYFIKLALKT***
Disordered Region (DISEMBL)
MTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYSLDSGYVFDPFLLDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIHVLENIRTRDIALTVRSLAEIYLEKLLKFIAAMLEVSKHIEFYVSWVSQILMVLKSPSQTTLVHLQRNLNKKYSDLAKISCQFDDTKFLPPTLFARMRTRGYDIWLWNARGNVYSREHVNLTSEQNKFYRFSCDFNVYTLELISRLGPLRIKPKV******************EIRVLDEDVPRSSDTGDIQLKSTRMNELGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLGNLVTKDMLEGLYGIYALNIFQVGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLGNLVTRDMLEGLYGIYAEYQTISGYFIKLALKTPHT
Disordered Region (DISPRO)
**EFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYSLDSGYVFDPFLLDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIHVLENIRTRDIALTVRSLAEIYLEKLLKFIAAMLEVSKHIEFYVSWVSQILMVLKSPSQTTLVHLQRNLNKKYSDLAKISCQFDDTKFLPPTLFARMRTRGYDIWLWNARGNVYSREHVNLTSEQNKFYRFSCDFNVYTLELISRLGPLR***********************EIRVLDEDVPRSSDTGDIQLKSTRMNELGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLGNLVTKDMLEGLYGIYALNIFQVGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLGNLVTRDMLEGLYGIYAEYQTISGYFIKLALKT***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYSLDSGYVFDPFLLDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIHVLENIRTRDIALTVRSLAEIYLEKLLKFIAAMLEVSKHIEFYVSWVSQILMVLKSPSQTTLVHLQRNLNKKYSDLAKISCQFDDTKFLPPTLFARMRTRGYDIWLWNARGNVYSREHVNLTSEQNKFYRFSCDFNVYTLELISRLGPLRIKPKVEKMETGSSDEESSKDDETEIRVLDEDVPRSSDTGDIQLKSTRMNELGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLGNLVTKDMLEGLYGIYALNIFQVGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLGNLVTRDMLEGLYGIYAEYQTISGYFIKLALKTPHT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	703	2.2.26 [Sep-21-2011]
Q15269	919	Periodic tryptophan prote	yes	N/A	0.519	0.397	0.484	1e-102
Q5RFQ3	918	Periodic tryptophan prote	yes	N/A	0.519	0.397	0.481	1e-100
Q8BU03	919	Periodic tryptophan prote	yes	N/A	0.540	0.413	0.460	3e-98
P25635	923	Periodic tryptophan prote	yes	N/A	0.469	0.357	0.422	1e-76
Q9C270	899	Periodic tryptophan prote	N/A	N/A	0.469	0.367	0.433	1e-73
Q9C1X1	854	Periodic tryptophan prote	yes	N/A	0.475	0.391	0.405	6e-71
P91341	910	Periodic tryptophan prote	yes	N/A	0.513	0.396	0.365	5e-66
Q54PE0	922	Periodic tryptophan prote	yes	N/A	0.522	0.398	0.351	2e-63
Q64LD2	544	WD repeat-containing prot	no	N/A	0.226	0.292	0.302	2e-09
O46108	394	Lipase 3 OS=Drosophila me	no	N/A	0.092	0.164	0.446	3e-09

>sp|Q15269|PWP2_HUMAN Periodic tryptophan protein 2 homolog OS=Homo sapiens GN=PWP2 PE=1 SV=2

 Score =  371 bits (953), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 182/376 (48%), Positives = 264/376 (70%), Gaps = 11/376 (2%)

Query: 41  EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYK 100
           +VLSGHEGP+S + F+P+ S   + SASWDKTV+LW+  ++    ET+ L SDAL V ++
Sbjct: 495 DVLSGHEGPISGLCFNPMKSV--LASASWDKTVRLWDMFDSWRTKETLALTSDALAVTFR 552

Query: 101 PDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVC 160
           PDG E+ VATL+ Q+  +D E+A Q GS+E R DL +GR + D +T + + K KA + +C
Sbjct: 553 PDGAELAVATLNSQITFWDPENAVQTGSIEGRHDLKTGRKELDKITAKHAAKGKAFTALC 612

Query: 161 YSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLI 220
           YSADG  ILA G SK++CIY  RE IL+K+F I+ N SLD + +F+NRRKMTEFGN++LI
Sbjct: 613 YSADGHSILAGGMSKFVCIYHVREQILMKRFEISCNLSLDAMEEFLNRRKMTEFGNLALI 672

Query: 221 ETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYSLD 280
           +     E G V + LPGV+KGDM++R  KPE+RV  ++FSPTG+ W A TTEG+ IYSLD
Sbjct: 673 DQDAGQEDG-VAIPLPGVRKGDMSSRHFKPEIRVTSLRFSPTGRCWAATTTEGLLIYSLD 731

Query: 281 SGYVFDPFLLDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIHVLENIRTRDIALTV 340
           +  +FDPF LD S+TP  V+EAL  +D+ +A++M+L+LNE  L+   LE +   +I +  
Sbjct: 732 TRVLFDPFELDTSVTPGRVREALRQQDFTRAILMALRLNESKLVQEALEAVPRGEIEVVT 791

Query: 341 RSLAEIYLEKLLKFIAAMLEVSKHIEFYVSWVSQILMV----LKSPSQTTLV---HLQRN 393
            SL E+Y+EK+L+F+A+  EVS+H+EFY+ W  ++LM+    LKS + T L     LQ++
Sbjct: 792 SSLPELYVEKVLEFLASSFEVSRHLEFYLLWTHKLLMLHGQKLKSRAGTLLPVIQFLQKS 851

Query: 394 LNKKYSDLAKISCQFD 409
           + +   DL+K+ C ++
Sbjct: 852 IQRHLDDLSKL-CSWN 866

Homo sapiens (taxid: 9606)

>sp|Q5RFQ3|PWP2_PONAB Periodic tryptophan protein 2 homolog OS=Pongo abelii GN=PWP2 PE=2 SV=1

 Score =  368 bits (944), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 181/376 (48%), Positives = 264/376 (70%), Gaps = 11/376 (2%)

Query: 41  EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYK 100
           +VLSGHEGP+S + F+P+ S   + SASWDKT +LW+  ++    ET+ L SDAL V ++
Sbjct: 492 DVLSGHEGPISGLCFNPMKSI--LASASWDKTERLWDMFDSWRTKETLALTSDALAVTFR 549

Query: 101 PDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVC 160
           PDG E+ VATL+ Q+  +D E+A Q GS+E R  L +GR + D +T + + K KA +T+C
Sbjct: 550 PDGAELAVATLNSQITFWDPENAVQTGSIEGRHHLKTGRKELDKITAKHAAKGKAFTTLC 609

Query: 161 YSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLI 220
           YSADG  ILA G SK++CIY  RE IL+K+F I+ N SLD + +F+NRRKMTEFGN++LI
Sbjct: 610 YSADGQSILAGGMSKFVCIYHVREQILMKRFEISCNLSLDAMEEFLNRRKMTEFGNLALI 669

Query: 221 ETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYSLD 280
           +     E G V + LPGV+KGDM++R  KPE+RV  ++FSPTG+ W A TTEG+ I+SLD
Sbjct: 670 DQDAGQEDG-VAIPLPGVRKGDMSSRHFKPEIRVTSLRFSPTGRCWAATTTEGLLIFSLD 728

Query: 281 SGYVFDPFLLDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIHVLENIRTRDIALTV 340
           +  +FDPF LD SITP  V+EAL  +D+ +A++M+L+LNE  L+   LE + + +I +  
Sbjct: 729 TRVLFDPFELDTSITPGRVREALRQQDFTRAILMALRLNESKLVQEALEAVPSGEIEVVT 788

Query: 341 RSLAEIYLEKLLKFIAAMLEVSKHIEFYVSWVSQILMV----LKSPSQTTLV---HLQRN 393
            SL E+Y+EK+L+F+A+  EVS+H+EFY+ W  ++LM+    LKS + T L     LQ++
Sbjct: 789 SSLPELYVEKVLEFLASSFEVSRHLEFYLLWTHRLLMLHGQKLKSRAGTLLPVIQFLQKS 848

Query: 394 LNKKYSDLAKISCQFD 409
           + +   DL+K+ C ++
Sbjct: 849 IQRHLDDLSKL-CSWN 863

Pongo abelii (taxid: 9601)

>sp|Q8BU03|PWP2_MOUSE Periodic tryptophan protein 2 homolog OS=Mus musculus GN=Pwp2 PE=1 SV=1

 Score =  360 bits (923), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 181/393 (46%), Positives = 265/393 (67%), Gaps = 13/393 (3%)

Query: 41  EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYK 100
           +VLSGHEGPVS + F+P+ S   + SASWDKTV+LW+  ++    ET+ L SDAL V ++
Sbjct: 495 DVLSGHEGPVSGLCFNPMKSI--LASASWDKTVRLWDMFDSWRTKETLTLTSDALAVTFR 552

Query: 101 PDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVC 160
           PDG E+ VATL+ Q+  +D E+A QVGS+E R DL +GR + D +T + S K KA +T+C
Sbjct: 553 PDGAELAVATLNSQITFWDPENAVQVGSIEGRHDLKTGRKELDKITAKHSAKGKAFTTLC 612

Query: 161 YSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLI 220
           YSADG  ILA G SK++C+Y  RE IL+K+F ++ N SLD + +F+NRRKMTEFGN++LI
Sbjct: 613 YSADGQSILAGGMSKFVCLYHVREQILVKRFELSCNLSLDAMEEFLNRRKMTEFGNLALI 672

Query: 221 ETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYSLD 280
           +     E G V + LPGV+KGDM++R  KPE+RV  ++FSPTG+ W A +TEG+ I+SLD
Sbjct: 673 DQDAGEENG-VAVPLPGVRKGDMSSRHFKPEIRVTSLRFSPTGRCWAATSTEGLLIFSLD 731

Query: 281 SGYVFDPFLLDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIHVLENIRTRDIALTV 340
           +  +FDPF LD S+TP  ++EAL  +++ +A++M+ +LNE+ L    LE +   +I +  
Sbjct: 732 AQMLFDPFELDTSVTPGRIREALRQREFTRAILMAFRLNEKKLAQEALEAVPQNEIEVVS 791

Query: 341 RSLAEIYLEKLLKFIAAMLEVSKHIEFYVSWVSQILMV----LKSPSQTTLV---HLQRN 393
            SL E+Y+ K+L+F+AA  E S+H+EFY+ W  ++LM     LKS +   L     LQ+ 
Sbjct: 792 TSLPELYVVKVLEFLAASFEESRHLEFYLIWTQKLLMSHGQRLKSRAGQLLPVVQFLQKG 851

Query: 394 LNKKYSDLAKISCQFDDTKFLPPTLFARMRTRG 426
           L +   D++K+    D  +F    + A  + RG
Sbjct: 852 LQRHLDDVSKLC---DWNRFNIQYVLAVSKQRG 881

Mus musculus (taxid: 10090)

>sp|P25635|PWP2_YEAST Periodic tryptophan protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PWP2 PE=1 SV=2

 Score =  288 bits (736), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 145/343 (42%), Positives = 223/343 (65%), Gaps = 13/343 (3%)

Query: 41  EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYK 100
           + LSGHEGPVSC+ FS    ++ + SASWDKT+++W+      Q E I++ SD L ++ +
Sbjct: 467 DALSGHEGPVSCLSFSQ--ENSVLASASWDKTIRIWSIFGRSQQVEPIEVYSDVLALSMR 524

Query: 101 PDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVC 160
           PDG E+ V+TL GQ+ +F++E A QVG+++ R+D+ SGR + D  T + S ++K  +T+ 
Sbjct: 525 PDGKEVAVSTLKGQISIFNIEDAKQVGNIDCRKDIISGRFNQDRFTAKNSERSKFFTTIH 584

Query: 161 YSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLI 220
           YS DG  I+A G +  IC+Y     +LLK+F +++N +L+G  +F+N +KMTE G++ LI
Sbjct: 585 YSFDGMAIVAGGNNNSICLYDVPNEVLLKRFIVSRNMALNGTLEFLNSKKMTEAGSLDLI 644

Query: 221 ETRETHEGGNVVLK------LPGVKK-GDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG 273
           +      G N  L+      LPG ++ GD++ R ++PEVRV  V+FSPT  A+ AA+TEG
Sbjct: 645 D----DAGENSDLEDRIDNSLPGSQRGGDLSTRKMRPEVRVTSVQFSPTANAFAAASTEG 700

Query: 274 VHIYSLDSGYVFDPFLLDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIHVLENIRT 333
           + IYS +   +FDPF LD+ +TP S  EAL +K +  AL+M+ +LNE+ LI  V E I  
Sbjct: 701 LLIYSTNDTILFDPFDLDVDVTPHSTVEALREKQFLNALVMAFRLNEEYLINKVYEAIPI 760

Query: 334 RDIALTVRSLAEIYLEKLLKFIAAMLEVSKHIEFYVSWVSQIL 376
           ++I L   ++  IYL ++LKFI      S+HIEF + W+  +L
Sbjct: 761 KEIPLVASNIPAIYLPRILKFIGDFAIESQHIEFNLIWIKALL 803

Required for bud-site selection and cell separation. Also involved in nucleolar processing of pre-18S ribosomal RNA.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q9C270|PWP2_NEUCR Periodic tryptophan protein 2 homolog OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=B18D24.40 PE=3 SV=1

 Score =  278 bits (710), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 147/339 (43%), Positives = 207/339 (61%), Gaps = 9/339 (2%)

Query: 43  LSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPD 102
           LSGHEGPVS + F+P  +   +VS SWD+T ++W+        E +QL SD L +A++PD
Sbjct: 463 LSGHEGPVSSLAFAP--NGGLLVSGSWDRTARIWSIFNRTQTSEPLQLNSDVLDIAFRPD 520

Query: 103 GTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYS 162
             +I ++TLDG L  + V  A Q   ++ RRD+  GR   D  T       KA +T+ YS
Sbjct: 521 SLQIAISTLDGNLSFWSVSEAEQQAGLDGRRDVSGGRKIGDRRTAANVAGTKAFNTIRYS 580

Query: 163 ADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIET 222
            DGSC+LA G SKYIC+YS    +LLKK+T++ N S+ G  +F+N + +TE G   L++ 
Sbjct: 581 TDGSCLLAGGNSKYICLYSVTTMVLLKKYTVSVNLSIQGTQEFLNSKLLTEAGPQGLLD- 639

Query: 223 RETHEGGN----VVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYS 278
            E  E  +    +   LPG K+GD +AR   PEVRV  V FSP G A+ AA+TEG+ IYS
Sbjct: 640 -EQGEASDFEDRIDRSLPGSKRGDPSARRKNPEVRVNGVAFSPNGSAFCAASTEGLLIYS 698

Query: 279 LDSGYVFDPFLLDISITPQSVKEAL-ADKDYAKALMMSLKLNEQGLIIHVLENIRTRDIA 337
           LD+   FDPF L++ ITP S    L  +KDY KAL+M+ +LNE GLI  V + I   DI 
Sbjct: 699 LDTTIQFDPFDLNMEITPTSTLAVLEKEKDYLKALVMAFRLNEAGLIQRVFQAIPYTDIP 758

Query: 338 LTVRSLAEIYLEKLLKFIAAMLEVSKHIEFYVSWVSQIL 376
           L V     +Y+ +LL+++AA  E S H+EF + W+  ++
Sbjct: 759 LVVEQFPNVYVARLLRYVAAQTEQSPHVEFCLLWIKALV 797

Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) (taxid: 367110)

>sp|Q9C1X1|PWP2_SCHPO Periodic tryptophan protein 2 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC713.04c PE=1 SV=1

 Score =  269 bits (687), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 137/338 (40%), Positives = 215/338 (63%), Gaps = 4/338 (1%)

Query: 41  EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYK 100
           E L+GHEGPVS +  S   S + + S SWDKTV++W+        E + + SD L +A+ 
Sbjct: 461 ETLAGHEGPVSSL--SFNSSGSLLASGSWDKTVRIWDIFSRSGIVEPLPIPSDVLSLAFH 518

Query: 101 PDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVC 160
           PDG E+ VA+LDGQL  ++V+   Q   ++ R+DL  GR   D  T E S   K  +++C
Sbjct: 519 PDGKEVCVASLDGQLTFWNVQEGKQTSLIDGRKDLSGGRRFDDARTAENSSLNKTFTSIC 578

Query: 161 YSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLI 220
           YSADGSC+L+AG SKY+C+Y    G+L+KKF +++N+SL G+ + +N RKMTE G++ LI
Sbjct: 579 YSADGSCVLSAGTSKYVCLYDIITGVLIKKFQLSKNESLQGVQEMLNSRKMTEAGSIELI 638

Query: 221 ETR--ETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYS 278
           +T+  E+     +   LPG ++GD++AR  +PE+    V+FSP+G A+ AATTEG+ IYS
Sbjct: 639 DTQGEESDLEDRIDRTLPGARRGDLSARKTRPEIICHGVQFSPSGGAFAAATTEGLMIYS 698

Query: 279 LDSGYVFDPFLLDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIHVLENIRTRDIAL 338
           L + ++FDP  LD+ ITP +     A+ ++  +L+M+L+LNE  ++  V E+I   D+  
Sbjct: 699 LYNDFLFDPINLDMDITPSTTLTMCAEGEFLISLVMALRLNEYKVVQKVYESIPITDVEH 758

Query: 339 TVRSLAEIYLEKLLKFIAAMLEVSKHIEFYVSWVSQIL 376
            V+ L   YL   + ++++    + HIEF++ W+  +L
Sbjct: 759 VVQELPVSYLANFMGYLSSFAAETPHIEFHLRWMKSVL 796

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|P91341|PWP2_CAEEL Periodic tryptophan protein 2 homolog OS=Caenorhabditis elegans GN=F55F8.3 PE=3 SV=2

 Score =  253 bits (645), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 138/378 (36%), Positives = 217/378 (57%), Gaps = 17/378 (4%)

Query: 41  EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYK 100
           ++LSGHE  +S I+    +    +VS SWD+T+K+W  V  D+Q ET+++  +AL V + 
Sbjct: 482 DILSGHESAISSID----IHGNHIVSGSWDRTIKMWTIV--DSQAETVEVSHEALDVKFS 535

Query: 101 PDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVC 160
           P G EI V T DG +  F+ +    +GS++ + D D  R   D +TR+ + K K  + + 
Sbjct: 536 PAGDEIAVLTSDGVITFFEAKEMINLGSIDTKLDTDPARGSRDTITRQSAAKTKTFTRIR 595

Query: 161 YSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLI 220
           +S DG+ +LA G+S   C+YS  E ++LKK+ IT N+SLDG+    NRR  TEFGN+ L+
Sbjct: 596 FSPDGNLLLAGGESNNFCLYSVPERMILKKWQITANRSLDGVILDFNRRNFTEFGNMQLV 655

Query: 221 ETR----ETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHI 276
           +T     E      + +KLPG K  D+  R  +PEV ++ V + PTG+ +   +TEGV +
Sbjct: 656 DTSDEEDELEPNNKMSIKLPGTKNFDLGERRARPEVNIYEVTYCPTGRRFAICSTEGVSV 715

Query: 277 YSLDSGYVFDPFLLDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIHVLENIRTRDI 336
           YSLD+  +FDPF LD     + +K A+ + DY+ A+M SL+LN    I   LE+     I
Sbjct: 716 YSLDTISMFDPFQLDSQTNAEVIKRAVWNNDYSTAIMASLRLNNAQYITECLESTSISQI 775

Query: 337 ALTVRSLAEIYLEKLLKFI--AAMLEVSKHIEFYVSWVSQIL----MVLKSPSQ-TTLVH 389
            L   SL  +Y E+LLK++    ++  ++H+ FY+ W+  IL    M LK  +   TL  
Sbjct: 776 PLVASSLPLMYAERLLKWMVEGNVMSSTRHVHFYMIWLRAILQHHGMQLKGRADVATLTG 835

Query: 390 LQRNLNKKYSDLAKISCQ 407
           +Q+ +      + K++ Q
Sbjct: 836 IQQIVAHHQQHITKLANQ 853

Caenorhabditis elegans (taxid: 6239)

>sp|Q54PE0|PWP2_DICDI Periodic tryptophan protein 2 homolog OS=Dictyostelium discoideum GN=pwp2 PE=3 SV=1

 Score =  244 bits (623), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 135/384 (35%), Positives = 223/384 (58%), Gaps = 17/384 (4%)

Query: 41  EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYK 100
           ++LSGH+ PV  + F P+  +  + SASWDK+ K+WN  E     E+IQ  SD L  AY 
Sbjct: 482 DILSGHQSPVCELAFDPI--NPFLASASWDKSCKIWNIFEDREIRESIQHTSDVLTCAYS 539

Query: 101 PDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVC 160
            DG + +V+ LDG + +++  +  Q+G ++ + D+  GR   D +  + +   +A + + 
Sbjct: 540 QDGKKFIVSCLDGTIQIYETSTWGQIGLIDGKNDIMGGRGYKDEILAKNNSAGRAFTKIA 599

Query: 161 YSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLI 220
           ++ +G CI+A G SKYICIY   + +L+KK++ + N SLDGI   IN +++ EFG++  +
Sbjct: 600 FTPNGECIIAGGNSKYICIYHIDQQVLIKKYSTSSNLSLDGITLDINWKRVGEFGHLDAM 659

Query: 221 ETRETHEGGNVVLK----LPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHI 276
           E ++     ++  +    L G  KGD++ R  K + +   +  SPTG+AW  +TTEG+ I
Sbjct: 660 E-KDFDSDDDLYQQNKEYLTGSSKGDLSKRTTKKKQKTTSISVSPTGRAWAVSTTEGLLI 718

Query: 277 YSLDSGYVFDPFLLDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIHVLENIRTRDI 336
           YSLD    FDP  L I I P S+   L  K+Y K+L+MS+KLNE+ +I  V E+I   +I
Sbjct: 719 YSLDDFLFFDPTDLSIDINPDSILSELNLKNYLKSLIMSIKLNEKPIIEKVFESIPFNEI 778

Query: 337 ALTVRSLAEIYLEKLLKFIAAMLEVSKHIEFYVSWVSQILM----VLKSPSQ---TTLVH 389
            L  +     YL+  ++F++   E + H+EF + WV  I +     +K+ S    T+L +
Sbjct: 779 QLVCQEFPIYYLKNFIQFLSGYFEKNHHLEFQMKWVKLISIYHGKYIKTNSLSMITSLRN 838

Query: 390 LQRNLNKKYSDLAKISCQFDDTKF 413
           LQ+ + + Y+D++K+    DD  F
Sbjct: 839 LQKTITQTYNDISKVC---DDNIF 859

Dictyostelium discoideum (taxid: 44689)

>sp|Q64LD2|WDR25_HUMAN WD repeat-containing protein 25 OS=Homo sapiens GN=WDR25 PE=2 SV=3

 Score = 64.7 bits (156), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 91/185 (49%), Gaps = 26/185 (14%)

Query: 43  LSGHEGPVSCIEFSPVLSSTGMV-SASWDKTVKLWNAVETDTQHETIQLLSDALCVA-YK 100
           L GH GPV+ I++ PVLS + M+ S S DKT K+WNAV++    +T  L ++A+  A + 
Sbjct: 242 LRGHRGPVNTIQWCPVLSKSHMLLSTSMDKTFKVWNAVDSGHCLQTYSLHTEAVRAARWA 301

Query: 101 PDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVC 160
           P G  I+    D  L + D+E+  Q         L SGR D  + T    LK        
Sbjct: 302 PCGRRILSGGFDFALHLTDLETGTQ---------LFSGRSDFRITT----LKF------- 341

Query: 161 YSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLI 220
           +  D +  L  G S  +  +  R G +++ +  T  ++L    D +  R+ +EF + +  
Sbjct: 342 HPKDHNIFLCGGFSSEMKAWDIRTGKVMRSYKATIQQTL----DILFLREGSEFLSSTDA 397

Query: 221 ETRET 225
            TR++
Sbjct: 398 STRDS 402

Homo sapiens (taxid: 9606)

>sp|O46108|LIP3_DROME Lipase 3 OS=Drosophila melanogaster GN=Lip3 PE=2 SV=1

 Score = 64.3 bits (155), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 42/65 (64%)

Query: 524 NELGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA 583
           NE+G+YD  A IDY+L +TG   +  +GHS GTT  L+  S RPEY  K++   L   +A
Sbjct: 135 NEIGMYDVPAMIDYVLAKTGQQQVQYVGHSQGTTVYLVMVSERPEYNDKIKSAHLLGPAA 194

Query: 584 FLGNL 588
           ++GN+
Sbjct: 195 YMGNM 199

Drosophila melanogaster (taxid: 7227)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	703
193695354	911	PREDICTED: periodic tryptophan protein 2	0.522	0.402	0.601	1e-131
380020249	901	PREDICTED: LOW QUALITY PROTEIN: periodic	0.519	0.405	0.580	1e-127
328782245	932	PREDICTED: periodic tryptophan protein 2	0.519	0.391	0.578	1e-126
340715341	928	PREDICTED: periodic tryptophan protein 2	0.517	0.392	0.582	1e-126
383855764	930	PREDICTED: periodic tryptophan protein 2	0.523	0.395	0.574	1e-125
350397601	928	PREDICTED: periodic tryptophan protein 2	0.516	0.391	0.576	1e-124
322787408	889	hypothetical protein SINV_01645 [Solenop	0.513	0.406	0.593	1e-124
307176609	937	Periodic tryptophan protein 2-like prote	0.519	0.389	0.566	1e-122
332020333	932	Periodic tryptophan protein 2-like prote	0.514	0.388	0.567	1e-121
345489050	908	PREDICTED: periodic tryptophan protein 2	0.519	0.401	0.575	1e-120

>gi|193695354|ref|XP_001947962.1| PREDICTED: periodic tryptophan protein 2 homolog [Acyrthosiphon pisum]

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 222/369 (60%), Positives = 290/369 (78%), Gaps = 2/369 (0%)

Query: 41  EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYK 100
           EVLSGHEGP+  +EFSP++SST +V+ASWDKT+++WNAVE  + HETIQL +D LCVA++
Sbjct: 505 EVLSGHEGPIVSLEFSPIISSTTLVTASWDKTLRIWNAVENASDHETIQLFADGLCVAFR 564

Query: 101 PDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVC 160
           PDG E+VVATLDGQL+ FDV ++ QV S+E R DL SGR DTDL+T +++L++KA ++VC
Sbjct: 565 PDGKEVVVATLDGQLLFFDVRTSTQVASIEGRNDLGSGRTDTDLITAKKNLQSKAFNSVC 624

Query: 161 YSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLI 220
           YSADG  ++A GQSK +CIY+  EGILLKKF ITQN+S D + D +NRRKMTEFGN+ LI
Sbjct: 625 YSADGQFVIAGGQSKNVCIYNVAEGILLKKFEITQNQSFDAVLDVVNRRKMTEFGNIDLI 684

Query: 221 ETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYSLD 280
           E RET EGGNV LKLPGV KGD+AAR  KPEV VF VKFSPTG +W AATTEGV +YSL+
Sbjct: 685 EQRETREGGNVKLKLPGVHKGDLAARTFKPEVNVFDVKFSPTGLSWSAATTEGVLVYSLN 744

Query: 281 SGYVFDPFLLDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIHVLENIRTRDIALTV 340
           +G++FDPFLL++ IT ++ K+ L  K+YA ALMM+L+LNE  LI  +LE+I + DI LTV
Sbjct: 745 NGFIFDPFLLELGITTKTTKDTLHKKEYASALMMALRLNEPNLITEILESIPSNDIELTV 804

Query: 341 RSLAEIYLEKLLKFIAAMLEVSKHIEFYVSWVSQILMVLKSPSQTTLVHLQRNLNKKYSD 400
            SL ++Y EK+ K IA +L  + HIEFYV W+   L+    P QT ++ L +NL+KKY+D
Sbjct: 805 ASLPKMYAEKITKHIAVLLGSTTHIEFYVQWI-MFLLNSYQPHQTIILTLYKNLSKKYTD 863

Query: 401 LAKISCQFD 409
           L+K+ C ++
Sbjct: 864 LSKV-CDYN 871

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380020249|ref|XP_003694003.1| PREDICTED: LOW QUALITY PROTEIN: periodic tryptophan protein 2 homolog [Apis florea]

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 219/377 (58%), Positives = 292/377 (77%), Gaps = 12/377 (3%)

Query: 41  EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYK 100
           E+LSGHEGPV+ + F+P ++ST +VS SWDKT+K+WNA+E  + HET+QL +D L V YK
Sbjct: 509 EILSGHEGPVASLAFNPSVASTELVSVSWDKTLKIWNAIENGSVHETLQLTADGLXVTYK 568

Query: 101 PDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVC 160
           P+G E+ VATLDGQ+  F  ++A Q+GS+E R DL SGR DTDL+T ++SLK KA S +C
Sbjct: 569 PNGEEVAVATLDGQISFFHCKTAVQIGSIEGRNDLGSGRSDTDLITAKKSLKGKAFSVLC 628

Query: 161 YSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLI 220
           YSADG+CILA GQSK ICIY+ +E IL+KKF ITQN+SLD ++D INRR +TEFGN++L+
Sbjct: 629 YSADGTCILAGGQSKNICIYNVQEYILVKKFIITQNRSLDAVDDIINRRNLTEFGNLALV 688

Query: 221 ETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYSLD 280
           E R+ +EGGNV ++LPGV+ GDMA+R +KPEVRV+ ++FSPTGQAW AATTEG+ +YSLD
Sbjct: 689 EERDEYEGGNVKIRLPGVRSGDMASRNIKPEVRVYSLQFSPTGQAWAAATTEGLLLYSLD 748

Query: 281 SGYVFDPFLLDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIHVLENIRTRDIALTV 340
            G  FDPF L++ ITP++VK+ L +  YAKALMM+LKLNE+ LI +V+ENI   DI LTV
Sbjct: 749 IGLAFDPFQLELGITPETVKKTLNEMQYAKALMMALKLNEKSLIKYVIENILCSDIDLTV 808

Query: 341 RSLAEIYLEKLLKFIAAMLEVSKHIEFYVSWVSQIL--------MVLKSPSQTTLVHLQR 392
            +L++IY+EK+LKFIA+ LE ++HI FY+ W+  IL          L+ P    L+ LQ+
Sbjct: 809 TNLSDIYIEKVLKFIASELEFTRHIHFYLLWIETILTKHGPRINAALQMP---ILLMLQK 865

Query: 393 NLNKKYSDLAKISCQFD 409
           N+ KKY DL+KI C F+
Sbjct: 866 NMQKKYDDLSKI-CDFN 881

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328782245|ref|XP_623489.2| PREDICTED: periodic tryptophan protein 2 homolog [Apis mellifera]

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 218/377 (57%), Positives = 290/377 (76%), Gaps = 12/377 (3%)

Query: 41  EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYK 100
           E+LSGHEGPV+ + F+P ++ST +VS SWDKT+K+WNA+E  + HET+QL +D L V YK
Sbjct: 518 EILSGHEGPVASLAFNPNVASTELVSVSWDKTLKIWNAIENGSVHETLQLTADGLFVTYK 577

Query: 101 PDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVC 160
           P+G E+ VATLDGQ+  F  ++A Q+GS+E R DL SGR DTDL+T ++SLK KA S +C
Sbjct: 578 PNGEEVAVATLDGQISFFHCKTAVQIGSIEGRNDLGSGRSDTDLITAKKSLKGKAFSVLC 637

Query: 161 YSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLI 220
           YSADG+CILA GQSK ICIY+ +E IL+KKF ITQN+SLD ++D INRR +TEFGN++L+
Sbjct: 638 YSADGTCILAGGQSKNICIYNVQEYILVKKFIITQNRSLDAVDDIINRRNLTEFGNLALV 697

Query: 221 ETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYSLD 280
           E R+ +EGGNV ++LPGV+ GDMA+R +KPEVRV+ ++FSPTGQAW AATTEG+ +YSLD
Sbjct: 698 EERDEYEGGNVKIRLPGVRSGDMASRNIKPEVRVYSLQFSPTGQAWAAATTEGLLLYSLD 757

Query: 281 SGYVFDPFLLDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIHVLENIRTRDIALTV 340
            G  FDPF L++ ITP++VK+ L +  YAKALMM+LKLNE+ LI +V+E+I   DI LTV
Sbjct: 758 IGLTFDPFQLELGITPETVKKTLNEMQYAKALMMALKLNERLLIKYVIESILCSDIDLTV 817

Query: 341 RSLAEIYLEKLLKFIAAMLEVSKHIEFYVSWVSQIL--------MVLKSPSQTTLVHLQR 392
             L +IY+EK+LKFIA+ LE ++HI FY+ W+  IL          L+ P    L+ LQ+
Sbjct: 818 TDLPDIYIEKILKFIASELEFTRHIHFYLLWIETILTKHGPKINAALQMP---ILLMLQK 874

Query: 393 NLNKKYSDLAKISCQFD 409
           N+ KKY DL+KI C F+
Sbjct: 875 NMQKKYDDLSKI-CDFN 890

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340715341|ref|XP_003396174.1| PREDICTED: periodic tryptophan protein 2 homolog [Bombus terrestris]

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 218/374 (58%), Positives = 292/374 (78%), Gaps = 10/374 (2%)

Query: 41  EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYK 100
           E+LSGHEGP++ + F+P ++ST +VS SWDKT+K+WNA+E+ + HETIQL +D L V YK
Sbjct: 518 EILSGHEGPIASLAFNPNVTSTELVSVSWDKTLKIWNAIESGSLHETIQLTADGLYVTYK 577

Query: 101 PDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVC 160
           P+G E+ VATLDGQ+  F+ ++A Q+GS+E R DL SGR DTDLVT +QSLK KA + +C
Sbjct: 578 PNGEEVAVATLDGQISFFNCKTAVQIGSIEGRNDLGSGRSDTDLVTAKQSLKGKAFTVLC 637

Query: 161 YSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLI 220
           YSADG+CILA G SK ICIY+ +E IL+KKF +TQN+SLDG++DFIN+R +TEFGN++L+
Sbjct: 638 YSADGTCILAGGHSKNICIYNVQEFILIKKFVVTQNRSLDGVDDFINKRNLTEFGNMALV 697

Query: 221 ETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYSLD 280
           E RE     NV L+LPGV+ GDMA+R +KPE+RV+ ++FSPTGQAW AATTEG+ +YSLD
Sbjct: 698 EKREE----NVKLRLPGVRSGDMASRNIKPEIRVYSLQFSPTGQAWAAATTEGLLLYSLD 753

Query: 281 SGYVFDPFLLDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIHVLENIRTRDIALTV 340
           +G VFDPF L++ ITP++VK+AL+  +YAKALMM+LKLNE+ LI  V+ENI   DI LTV
Sbjct: 754 AGLVFDPFELELGITPEAVKKALSQMEYAKALMMALKLNEKLLIKCVIENIPCSDINLTV 813

Query: 341 RSLAEIYLEKLLKFIAAMLEVSKHIEFYVSWVSQILMVLKSPSQTT-----LVHLQRNLN 395
            +L+ IY+EK+LKFIA+ LE ++HI FY+ W+  IL    S   T      L+ LQ+N+ 
Sbjct: 814 TALSNIYVEKVLKFIASELEFTRHIHFYLLWIEIILTSHGSRIDTALQMPILLMLQKNMQ 873

Query: 396 KKYSDLAKISCQFD 409
           KKY DL+K+ C F+
Sbjct: 874 KKYDDLSKL-CDFN 886

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383855764|ref|XP_003703380.1| PREDICTED: periodic tryptophan protein 2 homolog [Megachile rotundata]

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 215/374 (57%), Positives = 288/374 (77%), Gaps = 6/374 (1%)

Query: 41  EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYK 100
           E+LSGHEGPV  + F+P ++ST + S SWDKT+K+WNA+E+ + HETIQL SD L V YK
Sbjct: 518 EILSGHEGPVVSLAFNPSITSTELASVSWDKTLKIWNAIESGSAHETIQLTSDGLFVIYK 577

Query: 101 PDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVC 160
           P+G E+ VATLDG +  F+ ++A Q+GS+E R DL SGR  TDL+T ++SL+ KA +++C
Sbjct: 578 PNGEEVAVATLDGHISFFNCKTAGQIGSIEGRNDLGSGRSATDLITAKKSLQGKAFTSLC 637

Query: 161 YSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLI 220
           YSADG+CILA GQSK ICIY+ +E +L+KKF +TQNKSLDG+ D+IN+R +TEFGN +LI
Sbjct: 638 YSADGTCILAGGQSKNICIYNVQECMLVKKFVVTQNKSLDGVTDYINKRNLTEFGNKALI 697

Query: 221 ETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYSLD 280
           E R  +EGGNV LKLPGV+ GDMA+R +KPE+RV+ ++FSPTGQAW AATTEG+ IY+LD
Sbjct: 698 EKRGANEGGNVSLKLPGVRSGDMASRNIKPEIRVYSLQFSPTGQAWAAATTEGLLIYALD 757

Query: 281 SGYVFDPFLLDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIHVLENIRTRDIALTV 340
            G VFDPF L++ ITP++VK AL  K+Y+KALMMSL+LNE+ LI  V+E+I   DI LT 
Sbjct: 758 VGLVFDPFQLELGITPETVKIALNAKEYSKALMMSLRLNEKLLIQRVIESIPLTDIELTT 817

Query: 341 RSLAEIYLEKLLKFIAAMLEVSKHIEFYVSWVSQILM-----VLKSPSQTTLVHLQRNLN 395
            SL +IY++K+LKFIA+ LE ++HI FY+ W+  IL      +  S     L+ LQ+N+ 
Sbjct: 818 ASLPDIYVDKILKFIASELESTRHIHFYLLWIETILTKHGSKINSSLQMPILLMLQKNMQ 877

Query: 396 KKYSDLAKISCQFD 409
           KKY D++KI C F+
Sbjct: 878 KKYDDISKI-CDFN 890

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350397601|ref|XP_003484928.1| PREDICTED: periodic tryptophan protein 2 homolog [Bombus impatiens]

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 216/375 (57%), Positives = 293/375 (78%), Gaps = 12/375 (3%)

Query: 41  EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYK 100
           E+LSGHEGPV+ + F+P ++ST +VS SWDKT+K+WNA+E+ + HETIQL +D L V YK
Sbjct: 518 EILSGHEGPVASLAFNPSVTSTELVSVSWDKTLKIWNAIESGSLHETIQLTADGLYVTYK 577

Query: 101 PDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVC 160
           P+G E+ VATLDGQ+  F+  +A Q+GS+E R DL SGR +TDL+T +Q+LK KA + +C
Sbjct: 578 PNGEEVAVATLDGQISFFNCRTAVQIGSIEGRNDLGSGRCNTDLITAKQNLKGKAFTVLC 637

Query: 161 YSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLI 220
           YSADG+CILA G SK ICIY+ +E IL+KKF +TQN+SLD +++FIN+RK+TEFGN++L+
Sbjct: 638 YSADGTCILAGGNSKNICIYNVQEFILIKKFVVTQNRSLDEVDEFINKRKLTEFGNMALV 697

Query: 221 ETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYSLD 280
           E R    GGN+ L+LPGV+ GDMA+R  KPEVRV+ ++FSPTGQAWVAATTEG+ +YSLD
Sbjct: 698 EKR----GGNINLQLPGVRSGDMASRNTKPEVRVYSLQFSPTGQAWVAATTEGLLLYSLD 753

Query: 281 SGYVFDPFLLDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIHVLENIRTRDIALTV 340
           +G VFDPF L++ ITP++VK+AL+  +YAKALMM+LKLNE+ LI  V+ENI   DI LTV
Sbjct: 754 AGLVFDPFELELGITPEAVKKALSQMEYAKALMMALKLNEKLLIQCVIENIPCSDIDLTV 813

Query: 341 RSLAEIYLEKLLKFIAAMLEVSKHIEFYVSWVSQILMVLKSPSQTT------LVHLQRNL 394
             L+ IY+EK+LKFIA+ LE ++HI FY+ W+ +I++    P   T      L+ LQ+N+
Sbjct: 814 MVLSNIYVEKVLKFIASELEFTRHIHFYLLWI-EIILTSHGPRIDTALQMPILLMLQKNM 872

Query: 395 NKKYSDLAKISCQFD 409
            KKY DL+K+ C F+
Sbjct: 873 QKKYDDLSKL-CDFN 886

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322787408|gb|EFZ13496.1| hypothetical protein SINV_01645 [Solenopsis invicta]

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 219/369 (59%), Positives = 284/369 (76%), Gaps = 8/369 (2%)

Query: 41  EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYK 100
           E+LSGHEGPV+ + F+P LSST MVS SWDKT+K+WNAVE  + HETI+L +DALCV YK
Sbjct: 524 EILSGHEGPVASLAFNPNLSSTEMVSVSWDKTLKIWNAVENGSAHETIRLSADALCVTYK 583

Query: 101 PDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVC 160
           P G EI VATLDGQ+  F+ ++A Q G +E R DL +GR  TDLVT +++L++KA +T+C
Sbjct: 584 PSGEEIAVATLDGQITFFECKTARQTGFIEGRTDLGAGRSKTDLVTAKKNLQSKAFTTLC 643

Query: 161 YSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLI 220
           YSADG+CILA G+SK +CIY+ +E ILLKK+ ITQN+SLDG++D INRR M+EFGN +LI
Sbjct: 644 YSADGTCILAGGRSKNVCIYNVQESILLKKYEITQNRSLDGVDDVINRRFMSEFGNKALI 703

Query: 221 ETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYSLD 280
           E R   EGGN+ L+LPGVK GDMA+R +KPEVRV C++FSPTGQAW AATTEG+ IYSLD
Sbjct: 704 EHR---EGGNISLRLPGVKSGDMASRKVKPEVRVVCLQFSPTGQAWAAATTEGLLIYSLD 760

Query: 281 SGYVFDPFLLDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIHVLENIRTRDIALTV 340
            G +FDPF L++ ITP +V+E L   DYAKALMM+LKLNE+ L   V+E I  ++I LT+
Sbjct: 761 VGLMFDPFQLELGITPDTVRETLEKHDYAKALMMALKLNEKLLTQQVIETIPYKEIELTM 820

Query: 341 RSLAEIYLEKLLKFIAAMLEVSKHIEFYVSWVSQILMVLKSPSQTT-----LVHLQRNLN 395
            ++ +IY+EKLLKFIA+ LE+++HI FY+ WV  IL    S   T      L+ L +N+ 
Sbjct: 821 TNMPDIYIEKLLKFIASELELTRHIHFYLLWVETILTKYGSRINTALQIPVLLMLYKNMQ 880

Query: 396 KKYSDLAKI 404
           KKY DL+K+
Sbjct: 881 KKYDDLSKM 889

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307176609|gb|EFN66077.1| Periodic tryptophan protein 2-like protein [Camponotus floridanus]

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 212/374 (56%), Positives = 283/374 (75%), Gaps = 9/374 (2%)

Query: 41  EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYK 100
           E+LSGHEGP++ + F+P  +ST +VSASWDKTVK+WNAVE  + HETI+L++DALCV YK
Sbjct: 525 EILSGHEGPIASLAFNPSPASTELVSASWDKTVKIWNAVENGSAHETIRLIADALCVTYK 584

Query: 101 PDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVC 160
           P+G EI VATLDGQ+  F+ ++A Q G +E R DL +GR  TDL+T +++L+ KA +T+C
Sbjct: 585 PNGEEIAVATLDGQITFFECKTAKQTGFIEGRNDLGAGRSKTDLITAKKNLQGKAFTTLC 644

Query: 161 YSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLI 220
           YSADG+CILA G+SK +CIY+ +E ILLKK+ ITQN+SLDG++D INR+ M+EFGN +LI
Sbjct: 645 YSADGTCILAGGRSKNVCIYNVKESILLKKYEITQNRSLDGVDDVINRKYMSEFGNRALI 704

Query: 221 ETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYSLD 280
           E RE+   GN+ L+LPGV+ GDMA+R +KPEVRV C++FSPTGQAW A TTEG+ IYSLD
Sbjct: 705 EHRES---GNISLRLPGVRSGDMASRRVKPEVRVLCLQFSPTGQAWAAVTTEGLLIYSLD 761

Query: 281 SGYVFDPFLLDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIHVLENIRTRDIALTV 340
            G +FDPF L++ ITP +VKE L   DY KALMM+LKLNE+ L   V+E I  ++I LT 
Sbjct: 762 IGLMFDPFQLELGITPDTVKETLDKHDYTKALMMALKLNEKLLTQQVIEAIPYKEIELTT 821

Query: 341 RSLAEIYLEKLLKFIAAMLEVSKHIEFYVSWVSQILMVLKSPSQTT-----LVHLQRNLN 395
             + +IY+EKLLKFIA+ LE ++H+ FY+ W+  IL    S   T      L+ L +N+ 
Sbjct: 822 TGMPDIYVEKLLKFIASGLESTRHVHFYLLWIETILTKHGSRINTALQMPVLLMLHKNMQ 881

Query: 396 KKYSDLAKISCQFD 409
           KKY DL++I C F+
Sbjct: 882 KKYDDLSRI-CDFN 894

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332020333|gb|EGI60755.1| Periodic tryptophan protein 2-like protein [Acromyrmex echinatior]

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 210/370 (56%), Positives = 285/370 (77%), Gaps = 8/370 (2%)

Query: 41  EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYK 100
           E+LSGHEGP++ + F+P  +ST +VSASWDKT+K+WNA+E  + HET++L +DALCV YK
Sbjct: 520 EILSGHEGPIASLAFNPNPASTELVSASWDKTLKIWNAIENGSAHETVRLTADALCVTYK 579

Query: 101 PDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVC 160
           P+G E+ VATLDGQ+I F+ ++A Q G +E R DL +GR  TDL+T +++L++KA +T+C
Sbjct: 580 PNGEEVAVATLDGQIIFFECKTARQTGFIEGRTDLGAGRSKTDLITAKKNLQSKAFTTLC 639

Query: 161 YSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLI 220
           YSADG+CILA G+SK +CIY+ +E ILLKK+ ITQN+SL+G++D INR+ M+EFGN +LI
Sbjct: 640 YSADGTCILAGGRSKNVCIYNVKESILLKKYEITQNRSLNGVDDVINRKYMSEFGNKALI 699

Query: 221 ETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYSLD 280
           E R   EGGN+ L+LPGV+ GDMA+R +K EVRV C++FSPTGQAW AATTEG+ IYSLD
Sbjct: 700 EHR---EGGNISLRLPGVRSGDMASRRVKLEVRVLCLQFSPTGQAWAAATTEGLLIYSLD 756

Query: 281 SGYVFDPFLLDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIHVLENIRTRDIALTV 340
            G +FDPF L++ ITP +V+E L   DYAKALMM+LKLNE+ L   V+E I  ++I LT 
Sbjct: 757 IGLMFDPFQLELGITPDTVRETLDKHDYAKALMMALKLNEKLLTQQVIETIPYKEIELTT 816

Query: 341 RSLAEIYLEKLLKFIAAMLEVSKHIEFYVSWVSQILMVLKSPSQTT-----LVHLQRNLN 395
            +++++Y+EKLLKFIA+  E ++HI FY+ WV  IL    S   T      L+ LQ+N+ 
Sbjct: 817 MNMSDVYIEKLLKFIASEFESTRHIHFYLLWVEIILTKYGSRINTALQMPVLLMLQKNMQ 876

Query: 396 KKYSDLAKIS 405
           KKY DL+KIS
Sbjct: 877 KKYDDLSKIS 886

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345489050|ref|XP_001600681.2| PREDICTED: periodic tryptophan protein 2 homolog [Nasonia vitripennis]

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 217/377 (57%), Positives = 288/377 (76%), Gaps = 12/377 (3%)

Query: 41  EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYK 100
           E+LSGHEGPV  + FSP  +ST + S SWDKT+K+WNA+E+ + HETIQL SD L V YK
Sbjct: 497 EILSGHEGPVMSVAFSPNPASTELASVSWDKTLKIWNAIESGSSHETIQLTSDGLYVTYK 556

Query: 101 PDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVC 160
           P+G E+ VATLDGQ+  FD ++A Q+ ++E ++DL SGR +TDLVT ++SL+ KA +T+ 
Sbjct: 557 PNGEEVAVATLDGQISFFDCKTATQISTIEGKKDLGSGRAETDLVTAKRSLEGKAYTTLS 616

Query: 161 YSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLI 220
           Y+ADG+CILA GQSK +CIY+ +E ILLKKF ITQN+S D ++DFINRRK+TEFGN+ L+
Sbjct: 617 YTADGNCILAGGQSKNVCIYNIKESILLKKFEITQNRSFDAVDDFINRRKLTEFGNLGLV 676

Query: 221 ETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYSLD 280
           E RE +EGGNV L+LPGV+KGDMA+R  KPE+RV+ ++FSPTGQAW AATTEG+ IYSLD
Sbjct: 677 EEREENEGGNVALRLPGVRKGDMASRSTKPEIRVYSLQFSPTGQAWSAATTEGLLIYSLD 736

Query: 281 SGYVFDPFLLDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIHVLENIRTRDIALTV 340
            G VFDPF L+I ITP +VKE L  ++Y+ A+MMSLKLNE  L   +LEN+   DI LTV
Sbjct: 737 VGLVFDPFELEIGITPMTVKETLKRQEYSTAIMMSLKLNENALTREILENVPHSDITLTV 796

Query: 341 RSLAEIYLEKLLKFIAAMLEVSKHIEFYVSWVSQIL--------MVLKSPSQTTLVHLQR 392
            SL + Y+E+LLKF+A+ LE S+H+ FY+ W+  IL         V++ P   TL+ +Q+
Sbjct: 797 ASLPKTYVERLLKFVASELEESRHLHFYLLWIESILTEHVPKGDAVMQMP---TLLLMQK 853

Query: 393 NLNKKYSDLAKISCQFD 409
           N+ +KY DL+KI C F+
Sbjct: 854 NMQRKYDDLSKI-CDFN 869

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	703
FB|FBgn0033557	949	CG12325 [Drosophila melanogast	0.520	0.385	0.517	1.8e-101
UNIPROTKB|Q15269	919	PWP2 "Periodic tryptophan prot	0.519	0.397	0.484	5.5e-93
UNIPROTKB|E1BL00	919	PWP2 "Uncharacterized protein"	0.519	0.397	0.481	8.1e-92
UNIPROTKB|I3LBR8	427	PWP2 "Uncharacterized protein"	0.519	0.854	0.473	8.1e-92
RGD|1582817	920	Pwp2 "PWP2 periodic tryptophan	0.519	0.396	0.470	5.1e-90
MGI|MGI:1341200	919	Pwp2 "PWP2 periodic tryptophan	0.540	0.413	0.460	6.5e-90
SGD|S000000653	923	PWP2 "Conserved 90S pre-riboso	0.475	0.361	0.418	2.9e-71
UNIPROTKB|G4N183	900	MGG_07465 "Periodic tryptophan	0.472	0.368	0.445	7.7e-71
POMBASE|SPBC713.04c	854	SPBC713.04c "U3 snoRNP-associa	0.475	0.391	0.405	7e-70
CGD|CAL0003392	922	PWP2 [Candida albicans (taxid:	0.519	0.395	0.394	4e-67

FB|FBgn0033557 CG12325 [Drosophila melanogaster (taxid:7227)]

 Score = 982 (350.7 bits), Expect = 1.8e-101, Sum P(2) = 1.8e-101
 Identities = 194/375 (51%), Positives = 268/375 (71%)

Query:    41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYK 100
             E++SGHEGPV  I FSPV +S+ +VS SWDKTVK+WN +E++++HETI  +SD   V + 
Sbjct:   515 EIISGHEGPVVSIAFSPVATSSTLVSGSWDKTVKIWNCLESNSEHETIDAVSDVTNVTFS 574

Query:   101 PDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVC 160
             P G EI VATL G + +FD++SA QV ++E R DL +GRL+TD++T  ++ +A   ST+ 
Sbjct:   575 PSGEEIAVATLSGNITIFDIKSAGQVTTIEGRNDLSAGRLETDIITARKNAQANYFSTIE 634

Query:   161 YSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLI 220
             YSADG CILAAG+S  ICIY  RE ILLKKF ITQN SLDG+NDFI+R+ ++EFGN++L+
Sbjct:   635 YSADGECILAAGKSANICIYHVREAILLKKFEITQNHSLDGLNDFISRKHLSEFGNMALV 694

Query:   221 ETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYSLD 280
             E RE  EGG V ++LPGV++GDM++R  + EVRVF VKFSPTGQA+ AA TEG+ IY+LD
Sbjct:   695 EEREELEGGRVAIRLPGVQRGDMSSRRFQQEVRVFSVKFSPTGQAFAAAGTEGLCIYALD 754

Query:   281 SGYVFDPFLLDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIHVLENIRTRDIALTV 340
              G VFDPF L + +TP++V E+L  ++Y KAL+MSLKLNE  LI  VLE +  +D+ L  
Sbjct:   755 KGVVFDPFDLSLEVTPKAVHESLKQQNYTKALVMSLKLNEPNLIALVLERVPYKDVELVC 814

Query:   341 RSLAEIYLEKLLKFIAAMLEVSKHIEFYVSWVSQILMVLKSPSQ------TTLVHLQRNL 394
               L+  + ++LL+ +A  L+ + HIEFY+ W     ++ K  +Q      T L+ L   L
Sbjct:   815 ADLSPEFAQRLLQQLARQLQSTPHIEFYLQW--SCCLLTKHGNQDGVFQHTGLLALHEVL 872

Query:   395 NKKYSDLAKISCQFD 409
             ++KY  L KI C ++
Sbjct:   873 SRKYEMLNKI-CDYN 886

GO:0022008 "neurogenesis" evidence=IMP

UNIPROTKB|Q15269 PWP2 "Periodic tryptophan protein 2 homolog" [Homo sapiens (taxid:9606)]

 Score = 926 (331.0 bits), Expect = 5.5e-93, P = 5.5e-93
 Identities = 182/376 (48%), Positives = 264/376 (70%)

Query:    41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYK 100
             +VLSGHEGP+S + F+P+ S   + SASWDKTV+LW+  ++    ET+ L SDAL V ++
Sbjct:   495 DVLSGHEGPISGLCFNPMKSV--LASASWDKTVRLWDMFDSWRTKETLALTSDALAVTFR 552

Query:   101 PDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVC 160
             PDG E+ VATL+ Q+  +D E+A Q GS+E R DL +GR + D +T + + K KA + +C
Sbjct:   553 PDGAELAVATLNSQITFWDPENAVQTGSIEGRHDLKTGRKELDKITAKHAAKGKAFTALC 612

Query:   161 YSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLI 220
             YSADG  ILA G SK++CIY  RE IL+K+F I+ N SLD + +F+NRRKMTEFGN++LI
Sbjct:   613 YSADGHSILAGGMSKFVCIYHVREQILMKRFEISCNLSLDAMEEFLNRRKMTEFGNLALI 672

Query:   221 ETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYSLD 280
             +     E G V + LPGV+KGDM++R  KPE+RV  ++FSPTG+ W A TTEG+ IYSLD
Sbjct:   673 DQDAGQEDG-VAIPLPGVRKGDMSSRHFKPEIRVTSLRFSPTGRCWAATTTEGLLIYSLD 731

Query:   281 SGYVFDPFLLDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIHVLENIRTRDIALTV 340
             +  +FDPF LD S+TP  V+EAL  +D+ +A++M+L+LNE  L+   LE +   +I +  
Sbjct:   732 TRVLFDPFELDTSVTPGRVREALRQQDFTRAILMALRLNESKLVQEALEAVPRGEIEVVT 791

Query:   341 RSLAEIYLEKLLKFIAAMLEVSKHIEFYVSWVSQILMV----LKSPSQTTLV---HLQRN 393
              SL E+Y+EK+L+F+A+  EVS+H+EFY+ W  ++LM+    LKS + T L     LQ++
Sbjct:   792 SSLPELYVEKVLEFLASSFEVSRHLEFYLLWTHKLLMLHGQKLKSRAGTLLPVIQFLQKS 851

Query:   394 LNKKYSDLAKISCQFD 409
             + +   DL+K+ C ++
Sbjct:   852 IQRHLDDLSKL-CSWN 866

GO:0004871 "signal transducer activity" evidence=TAS

GO:0007165 "signal transduction" evidence=TAS

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

UNIPROTKB|E1BL00 PWP2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 915 (327.2 bits), Expect = 8.1e-92, P = 8.1e-92
 Identities = 181/376 (48%), Positives = 261/376 (69%)

Query:    41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYK 100
             +VLSGHEGP+S + F+P+ S   + SASWD+TV LW+  ++    ET+ L SDAL V ++
Sbjct:   493 DVLSGHEGPISGLCFNPMKSV--LASASWDRTVHLWDMADSWRTTETLALTSDALAVTFR 550

Query:   101 PDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVC 160
             PDG E+ VATL+ Q+  +D E+A Q GS+E R DL +GR + D +T + S K KA +T+C
Sbjct:   551 PDGAELAVATLNSQITFWDPENAVQTGSIEGRHDLKTGRKELDKITAKHSAKGKAFTTLC 610

Query:   161 YSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLI 220
             YSADG  ILA G SK++CIY  RE IL KKF I+ N SLD + +F+NRRKMTEFGN++LI
Sbjct:   611 YSADGQSILAGGMSKFVCIYHVREQILRKKFEISCNLSLDAMEEFLNRRKMTEFGNLALI 670

Query:   221 ETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYSLD 280
             +     EGG V + LPGVKKGDM++R  KPE+RV  ++FSPTG+ W A TTEG+ IYSLD
Sbjct:   671 DQDAAEEGG-VAIPLPGVKKGDMSSRHFKPEIRVTSLRFSPTGRCWAATTTEGLLIYSLD 729

Query:   281 SGYVFDPFLLDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIHVLENIRTRDIALTV 340
             +  +FDPF LD S+TP  ++ AL  +D+ +A++++ +LNE+ L+   LE +   +I +  
Sbjct:   730 AQMLFDPFELDTSVTPVRIRAALRQRDFTRAILLAFRLNERKLLQETLEAVPWDEIEVIS 789

Query:   341 RSLAEIYLEKLLKFIAAMLEVSKHIEFYVSWVSQILMV----LKSPSQTTLV---HLQRN 393
              SL ++Y+EK+L+F+A+  EVS H+EFY+ W  ++LMV    LKS   T L     LQ++
Sbjct:   790 SSLPDLYVEKVLEFLASSFEVSHHLEFYLIWTQKLLMVHGQKLKSRVGTLLPAVQFLQKS 849

Query:   394 LNKKYSDLAKISCQFD 409
             + +   D++K+ C ++
Sbjct:   850 IQRHLDDVSKL-CDWN 864

GO:0005737 "cytoplasm" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

UNIPROTKB|I3LBR8 PWP2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 915 (327.2 bits), Expect = 8.1e-92, P = 8.1e-92
 Identities = 178/376 (47%), Positives = 262/376 (69%)

Query:    41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYK 100
             +VLSGHEGP+S + F+P  S   + SASWD+TV+LW+  ++    ET+ L SDAL V ++
Sbjct:     2 QVLSGHEGPISGLCFNPTKSV--LASASWDRTVRLWDMADSWRTTETLALTSDALAVTFR 59

Query:   101 PDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVC 160
             PDG E+ VATL+ Q+  +D E+A Q GS+E R DL SGR + D +T + S K KA + +C
Sbjct:    60 PDGAELAVATLNSQITFWDPENAVQTGSIEGRHDLKSGRKELDKITAKHSAKGKAFTALC 119

Query:   161 YSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLI 220
             YSADG  +LA G+SK++CIY  RE IL K+F I+ N SLD + +F+NRRKMTEFGN++LI
Sbjct:   120 YSADGQSVLAGGRSKFVCIYHVREQILRKRFEISGNLSLDAMEEFLNRRKMTEFGNLALI 179

Query:   221 ETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYSLD 280
             +     E G V + LPGVKKGDM++R  KPE+RV  ++FSPTG+ W A TTEG+ IYSLD
Sbjct:   180 DQDAAEEAG-VAIPLPGVKKGDMSSRHFKPEIRVTSLRFSPTGRCWAATTTEGLLIYSLD 238

Query:   281 SGYVFDPFLLDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIHVLENIRTRDIALTV 340
             +  +FDPF LD S+TP  V+ AL  +D+ +A++M+ +LNE+ L+   LE++   ++ +  
Sbjct:   239 ARMLFDPFELDTSVTPARVRAALRQRDFTRAILMAFRLNERKLLQEALESVPWDEVEVVS 298

Query:   341 RSLAEIYLEKLLKFIAAMLEVSKHIEFYVSWVSQILMV----LKSPSQTTLV---HLQRN 393
              SL ++Y+EK+L+F+A+ LEVS H+EFY+ W  ++LM     LK+ + T L     LQ++
Sbjct:   299 SSLPDLYVEKVLEFLASSLEVSHHLEFYLVWAQKLLMAHGQKLKARAGTLLPAVQFLQKS 358

Query:   394 LNKKYSDLAKISCQFD 409
             + + +  L+K+ C ++
Sbjct:   359 IQRHFDGLSKL-CDWN 373

GO:0005737 "cytoplasm" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

RGD|1582817 Pwp2 "PWP2 periodic tryptophan protein homolog (yeast)" [Rattus norvegicus (taxid:10116)]

 Score = 898 (321.2 bits), Expect = 5.1e-90, P = 5.1e-90
 Identities = 177/376 (47%), Positives = 259/376 (68%)

Query:    41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYK 100
             +VLSGHEGP+S + F+P+ S   + SASWDKTV+LW+  ++    ET+ L SD L V Y+
Sbjct:   497 DVLSGHEGPISGLCFNPMKSI--LASASWDKTVRLWDMFDSWRTKETLSLTSDVLAVTYR 554

Query:   101 PDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVC 160
             PDG E+ VATL+ Q+  +D E+A QVGS+E R DL +GR + D +T + S K KA +TVC
Sbjct:   555 PDGAELAVATLNSQITFWDPENAVQVGSIEGRHDLKTGRKELDKITAKHSAKGKAFTTVC 614

Query:   161 YSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLI 220
             YSADG  ILA G SK++C+Y  RE IL+K+F ++ N SLD + +F+NRRKMTEFGN++LI
Sbjct:   615 YSADGQNILAGGMSKFVCLYHVREQILVKRFELSCNFSLDAMEEFLNRRKMTEFGNLALI 674

Query:   221 ETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYSLD 280
             +     E G V + LPGV+KGDM++R  KPE+RV  ++FSPTG+ W A +TEG+ I+SLD
Sbjct:   675 DQDAGEENG-VAIPLPGVRKGDMSSRHFKPEIRVTSLRFSPTGRCWAATSTEGLLIFSLD 733

Query:   281 SGYVFDPFLLDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIHVLENIRTRDIALTV 340
             +  +FDPF LD S+TP  ++EAL  +++ +A++M+ +LNE+ L    LE +   +I +  
Sbjct:   734 AQMLFDPFELDTSVTPGRIREALRQREFTRAILMAFRLNEKKLAQEALEAVPQNEIEVVS 793

Query:   341 RSLAEIYLEKLLKFIAAMLEVSKHIEFYVSWVSQILMV----LKSPSQTTLV---HLQRN 393
              SL E+Y+ K+L+F+AA  E S+H+EFY+ W  ++LM     LKS +   L     LQ+ 
Sbjct:   794 ASLPELYVVKVLEFLAASFEESRHLEFYLIWTQKLLMSHGQRLKSRAGQLLPVVQFLQKG 853

Query:   394 LNKKYSDLAKISCQFD 409
             L +   D++K+ C ++
Sbjct:   854 LQRHLDDISKL-CDWN 868

GO:0005730 "nucleolus" evidence=IEA;ISO

GO:0005737 "cytoplasm" evidence=IEA;ISO

MGI|MGI:1341200 Pwp2 "PWP2 periodic tryptophan protein homolog (yeast)" [Mus musculus (taxid:10090)]

 Score = 897 (320.8 bits), Expect = 6.5e-90, P = 6.5e-90
 Identities = 181/393 (46%), Positives = 267/393 (67%)

Query:    41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYK 100
             +VLSGHEGPVS + F+P+ S   + SASWDKTV+LW+  ++    ET+ L SDAL V ++
Sbjct:   495 DVLSGHEGPVSGLCFNPMKSI--LASASWDKTVRLWDMFDSWRTKETLTLTSDALAVTFR 552

Query:   101 PDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVC 160
             PDG E+ VATL+ Q+  +D E+A QVGS+E R DL +GR + D +T + S K KA +T+C
Sbjct:   553 PDGAELAVATLNSQITFWDPENAVQVGSIEGRHDLKTGRKELDKITAKHSAKGKAFTTLC 612

Query:   161 YSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLI 220
             YSADG  ILA G SK++C+Y  RE IL+K+F ++ N SLD + +F+NRRKMTEFGN++LI
Sbjct:   613 YSADGQSILAGGMSKFVCLYHVREQILVKRFELSCNLSLDAMEEFLNRRKMTEFGNLALI 672

Query:   221 ETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYSLD 280
             +     E G V + LPGV+KGDM++R  KPE+RV  ++FSPTG+ W A +TEG+ I+SLD
Sbjct:   673 DQDAGEENG-VAVPLPGVRKGDMSSRHFKPEIRVTSLRFSPTGRCWAATSTEGLLIFSLD 731

Query:   281 SGYVFDPFLLDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIHVLENIRTRDIALTV 340
             +  +FDPF LD S+TP  ++EAL  +++ +A++M+ +LNE+ L    LE +   +I +  
Sbjct:   732 AQMLFDPFELDTSVTPGRIREALRQREFTRAILMAFRLNEKKLAQEALEAVPQNEIEVVS 791

Query:   341 RSLAEIYLEKLLKFIAAMLEVSKHIEFYVSWVSQILMV----LKSPSQTTLV---HLQRN 393
              SL E+Y+ K+L+F+AA  E S+H+EFY+ W  ++LM     LKS +   L     LQ+ 
Sbjct:   792 TSLPELYVVKVLEFLAASFEESRHLEFYLIWTQKLLMSHGQRLKSRAGQLLPVVQFLQKG 851

Query:   394 LNKKYSDLAKISCQFDDTKFLPPTLFARMRTRG 426
             L +   D++K+ C ++  +F    + A  + RG
Sbjct:   852 LQRHLDDVSKL-CDWN--RFNIQYVLAVSKQRG 881

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=IEA

GO:0008150 "biological_process" evidence=ND

SGD|S000000653 PWP2 "Conserved 90S pre-ribosomal component" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 721 (258.9 bits), Expect = 2.9e-71, P = 2.9e-71
 Identities = 142/339 (41%), Positives = 221/339 (65%)

Query:    41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYK 100
             + LSGHEGPVSC+ FS    ++ + SASWDKT+++W+      Q E I++ SD L ++ +
Sbjct:   467 DALSGHEGPVSCLSFSQ--ENSVLASASWDKTIRIWSIFGRSQQVEPIEVYSDVLALSMR 524

Query:   101 PDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVC 160
             PDG E+ V+TL GQ+ +F++E A QVG+++ R+D+ SGR + D  T + S ++K  +T+ 
Sbjct:   525 PDGKEVAVSTLKGQISIFNIEDAKQVGNIDCRKDIISGRFNQDRFTAKNSERSKFFTTIH 584

Query:   161 YSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLI 220
             YS DG  I+A G +  IC+Y     +LLK+F +++N +L+G  +F+N +KMTE G++ LI
Sbjct:   585 YSFDGMAIVAGGNNNSICLYDVPNEVLLKRFIVSRNMALNGTLEFLNSKKMTEAGSLDLI 644

Query:   221 ETRETHEG--GNVVLKLPGVKKG-DMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIY 277
             +    +      +   LPG ++G D++ R ++PEVRV  V+FSPT  A+ AA+TEG+ IY
Sbjct:   645 DDAGENSDLEDRIDNSLPGSQRGGDLSTRKMRPEVRVTSVQFSPTANAFAAASTEGLLIY 704

Query:   278 SLDSGYVFDPFLLDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIHVLENIRTRDIA 337
             S +   +FDPF LD+ +TP S  EAL +K +  AL+M+ +LNE+ LI  V E I  ++I 
Sbjct:   705 STNDTILFDPFDLDVDVTPHSTVEALREKQFLNALVMAFRLNEEYLINKVYEAIPIKEIP 764

Query:   338 LTVRSLAEIYLEKLLKFIAAMLEVSKHIEFYVSWVSQIL 376
             L   ++  IYL ++LKFI      S+HIEF + W+  +L
Sbjct:   765 LVASNIPAIYLPRILKFIGDFAIESQHIEFNLIWIKALL 803

GO:0005730 "nucleolus" evidence=IEA;IDA

GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP

GO:0000480 "endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP

GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP

GO:0000447 "endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP

GO:0005634 "nucleus" evidence=IEA

GO:0006364 "rRNA processing" evidence=IEA

GO:0030529 "ribonucleoprotein complex" evidence=IEA

GO:0030686 "90S preribosome" evidence=IDA

GO:0032040 "small-subunit processome" evidence=IDA

GO:0000910 "cytokinesis" evidence=IMP

GO:0030010 "establishment of cell polarity" evidence=IMP

GO:0034388 "Pwp2p-containing subcomplex of 90S preribosome" evidence=IDA

GO:0042254 "ribosome biogenesis" evidence=IEA

GO:0005737 "cytoplasm" evidence=IDA

GO:0030515 "snoRNA binding" evidence=IPI

UNIPROTKB|G4N183 MGG_07465 "Periodic tryptophan protein 2" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
 Identities = 150/337 (44%), Positives = 211/337 (62%)

Query:    43 LSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPD 102
             LSGHEGPVS + F+P      +VS SWDKT ++W+        E +QL +D L VA +PD
Sbjct:   467 LSGHEGPVSAVAFAP--DGGLLVSGSWDKTARIWSVFNRTQTSEPLQLQADVLSVAVRPD 524

Query:   103 GTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYS 162
              +++ V+TLDGQ+  + V  A QV  V+ RRD+  GR  TD  T   +   KA  T+ YS
Sbjct:   525 SSQLAVSTLDGQISFWSVTEAQQVSGVDGRRDVSGGRKITDRRTAANAGGTKAFHTIQYS 584

Query:   163 ADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIET 222
              DGSC++A G SKY+C+YS+   +LLKKFT++ N SL G  +F+N +++TE G   L++ 
Sbjct:   585 MDGSCLIAGGNSKYMCLYSTTTMVLLKKFTVSVNLSLSGTQEFLNSKQLTEAGPQELLDD 644

Query:   223 RETHEGGNVVLK-LPGVKKG-DMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYSLD 280
              +  +  + V + LPG K+G D +AR    EV+V  V F+P G A+ AA+TEG+ IYSLD
Sbjct:   645 HDASDREDRVNRSLPGSKRGGDPSARTTHAEVKVSGVSFAPDGAAFCAASTEGLLIYSLD 704

Query:   281 SGYVFDPFLLDISITPQSVKEALA-DKDYAKALMMSLKLNEQGLIIHVLENIRTRDIALT 339
                 FDPF L++ ITP S    L  +KDY KAL+M+ +LNE GLI  V + I  RDI L 
Sbjct:   705 HTVQFDPFDLNMEITPASTLAVLENEKDYLKALVMAFRLNEAGLIKRVYQAIPHRDIPLV 764

Query:   340 VRSLAEIYLEKLLKFIAAMLEVSKHIEFYVSWVSQIL 376
             V     +Y+ +LL+F+AA  E S HIEF + W+  ++
Sbjct:   765 VEQFPPVYVARLLRFVAAQTEESPHIEFCLLWIKALV 801

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

POMBASE|SPBC713.04c SPBC713.04c "U3 snoRNP-associated protein Utp1 (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 708 (254.3 bits), Expect = 7.0e-70, P = 7.0e-70
 Identities = 137/338 (40%), Positives = 216/338 (63%)

Query:    41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYK 100
             E L+GHEGPVS + F+   S + + S SWDKTV++W+        E + + SD L +A+ 
Sbjct:   461 ETLAGHEGPVSSLSFNS--SGSLLASGSWDKTVRIWDIFSRSGIVEPLPIPSDVLSLAFH 518

Query:   101 PDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVC 160
             PDG E+ VA+LDGQL  ++V+   Q   ++ R+DL  GR   D  T E S   K  +++C
Sbjct:   519 PDGKEVCVASLDGQLTFWNVQEGKQTSLIDGRKDLSGGRRFDDARTAENSSLNKTFTSIC 578

Query:   161 YSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLI 220
             YSADGSC+L+AG SKY+C+Y    G+L+KKF +++N+SL G+ + +N RKMTE G++ LI
Sbjct:   579 YSADGSCVLSAGTSKYVCLYDIITGVLIKKFQLSKNESLQGVQEMLNSRKMTEAGSIELI 638

Query:   221 ETR--ETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYS 278
             +T+  E+     +   LPG ++GD++AR  +PE+    V+FSP+G A+ AATTEG+ IYS
Sbjct:   639 DTQGEESDLEDRIDRTLPGARRGDLSARKTRPEIICHGVQFSPSGGAFAAATTEGLMIYS 698

Query:   279 LDSGYVFDPFLLDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIHVLENIRTRDIAL 338
             L + ++FDP  LD+ ITP +     A+ ++  +L+M+L+LNE  ++  V E+I   D+  
Sbjct:   699 LYNDFLFDPINLDMDITPSTTLTMCAEGEFLISLVMALRLNEYKVVQKVYESIPITDVEH 758

Query:   339 TVRSLAEIYLEKLLKFIAAMLEVSKHIEFYVSWVSQIL 376
              V+ L   YL   + ++++    + HIEF++ W+  +L
Sbjct:   759 VVQELPVSYLANFMGYLSSFAAETPHIEFHLRWMKSVL 796

GO:0005730 "nucleolus" evidence=IDA

GO:0005732 "small nucleolar ribonucleoprotein complex" evidence=ISO

GO:0005829 "cytosol" evidence=IDA

GO:0006364 "rRNA processing" evidence=ISO

GO:0030515 "snoRNA binding" evidence=ISO

CGD|CAL0003392 PWP2 [Candida albicans (taxid:5476)]

 Score = 682 (245.1 bits), Expect = 4.0e-67, P = 4.0e-67
 Identities = 150/380 (39%), Positives = 232/380 (61%)

Query:    43 LSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPD 102
             L+GHEGP+SC+ F     ++ + SASWDKT+++WN    +   E I++ SDALC+  +PD
Sbjct:   463 LTGHEGPISCLTFGK--ENSILASASWDKTIRIWNIFSRNQTVEPIEIQSDALCLTMRPD 520

Query:   103 GTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYS 162
               E+ V+TLDG + +FD+E A Q+  ++ R+D+ +GR   D    + S + K  ST+ YS
Sbjct:   521 CKELAVSTLDGHVTIFDIEDAKQLHLIDGRKDIVNGRYLEDKFIAKNSNRGKYFSTIAYS 580

Query:   163 ADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFG-NVSLIE 221
              DG  +LAAG +  IC+Y     +LLK+F +++N SLDG   F+N  K+T+ G N  LI+
Sbjct:   581 FDGLTLLAAGNNNSICMYDIENEVLLKRFIVSENMSLDGTLQFLNSSKITDAGTNSDLID 640

Query:   222 TR-ETHE-GGNVVLKLPGVKKG-DMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYS 278
                E  +    V   LPG  +G D + R  +PEVRV  V+FSPT  A+ AA+TEG+ I+S
Sbjct:   641 RAGELSDLEDRVDNSLPGSHRGGDPSERRTRPEVRVTAVEFSPTTAAFAAASTEGLLIFS 700

Query:   279 LDSGYVFDPFLLDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIHVLENIRTRDIAL 338
             ++   +FDPF LD+ +TP++  E+L +K+Y  AL+M+ +LNE  LI  V+E+I  +DI L
Sbjct:   701 INQELIFDPFDLDVDVTPEATLESLKEKEYLVALVMAFRLNENYLIHRVIESIPLQDIKL 760

Query:   339 TVRSLAEIYLEKLLKFIAAML--EVSKHIEFYVSWVSQILM----VLKSPS---QTTLVH 389
               + L  IY+ ++L FI  +L  + S HIE+Y+  V  +L+     + S     Q+++  
Sbjct:   761 VCQDLPVIYVNRVLNFIGELLTKKESPHIEYYLIMVKNLLIQHGRYISSNKFEFQSSMKL 820

Query:   390 LQRNLNKKYSDLAKISCQFD 409
             L R LNK   D+  +  + D
Sbjct:   821 LSRFLNKTAKDVINVGKRND 840

GO:0032040 "small-subunit processome" evidence=IDA

GO:0030515 "snoRNA binding" evidence=IEA

GO:0034388 "Pwp2p-containing subcomplex of 90S preribosome" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0030010 "establishment of cell polarity" evidence=IEA

GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA

GO:0000910 "cytokinesis" evidence=IEA

GO:0000447 "endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA

GO:0000480 "endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.1	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	703
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	2e-14
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	1e-13
pfam04003	109	pfam04003, Utp12, Dip2/Utp12 Family	3e-13
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	1e-12
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	3e-09
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	2e-08
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	3e-07
smart00320	40	smart00320, WD40, WD40 repeats	7e-07
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	6e-06
pfam08625	138	pfam08625, Utp13, Utp13 specific WD40 associated d	8e-06
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	2e-05

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 74.3 bits (183), Expect = 2e-14
 Identities = 53/261 (20%), Positives = 96/261 (36%), Gaps = 75/261 (28%)

Query: 42  VLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDAL-CVAYK 100
            L GH G V+C+ FSP      + + S D T+K+W+ +ET     T++  +  +  VA  
Sbjct: 4   TLKGHTGGVTCVAFSP--DGKLLATGSGDGTIKVWD-LETGELLRTLKGHTGPVRDVAAS 60

Query: 101 PDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVC 160
            DGT +   + D  + ++D                    L+T    R  +     VS+V 
Sbjct: 61  ADGTYLASGSSDKTIRLWD--------------------LETGECVRTLTGHTSYVSSVA 100

Query: 161 YSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNV--- 217
           +S DG  + ++ + K I ++    G            +L G  D++N    +  G     
Sbjct: 101 FSPDGRILSSSSRDKTIKVWDVETG--------KCLTTLRGHTDWVNSVAFSPDGTFVAS 152

Query: 218 ---------------SLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPT 262
                            + T   H G                         V  V FSP 
Sbjct: 153 SSQDGTIKLWDLRTGKCVATLTGHTGE------------------------VNSVAFSPD 188

Query: 263 GQAWVAATTEG-VHIYSLDSG 282
           G+  ++++++G + ++ L +G
Sbjct: 189 GEKLLSSSSDGTIKLWDLSTG 209

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 71.6 bits (176), Expect = 1e-13
 Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 32/156 (20%)

Query: 42  VLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNA-----VETDTQHETIQLLSDALC 96
            L GH   V+ + FSP    T + S+S D T+KLW+      V T T H       +   
Sbjct: 130 TLRGHTDWVNSVAFSP--DGTFVASSSQDGTIKLWDLRTGKCVATLTGHT-----GEVNS 182

Query: 97  VAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAV 156
           VA+ PDG +++ ++ DG + ++D+ +   +G++    +                     V
Sbjct: 183 VAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHEN--------------------GV 222

Query: 157 STVCYSADGSCILAAGQSKYICIYSSREGILLKKFT 192
           ++V +S DG  + +  +   I ++  R G  ++  +
Sbjct: 223 NSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLS 258

Length = 289

>gnl|CDD|217837 pfam04003, Utp12, Dip2/Utp12 Family

 Score = 66.1 bits (162), Expect = 3e-13
 Identities = 36/95 (37%), Positives = 53/95 (55%), Gaps = 8/95 (8%)

Query: 319 NEQGLIIHVLENIRTRDIALTVRSLAEIYLEKLLKFIAAML--EVSKHIEFYVSWVSQIL 376
           NE+ LI+ VLE I   DI LT+ SL   Y+ +LL+F+A  L  E S H+EF + W+  +L
Sbjct: 1   NEEELILKVLEKIPPSDIELTLLSLPFSYVLRLLEFLAERLQAERSPHLEFLLRWLKFLL 60

Query: 377 MV----LKS-PS-QTTLVHLQRNLNKKYSDLAKIS 405
            +    L S P+    L  LQ+ L ++  DL  + 
Sbjct: 61  RIHGKYLVSNPNLLPQLRSLQKVLRRRVKDLRDLL 95

This domain is found at the C-terminus of proteins containing WD40 repeats. These proteins are part of the U3 ribonucleoprotein the yeast protein is called Utp12 or DIP2. Length = 109

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 68.5 bits (168), Expect = 1e-12
 Identities = 57/264 (21%), Positives = 106/264 (40%), Gaps = 49/264 (18%)

Query: 43  LSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQL-LSDALCVAYKP 101
           L GH GPV  +  S     T + S S DKT++LW+ +ET     T+    S    VA+ P
Sbjct: 47  LKGHTGPVRDVAASA--DGTYLASGSSDKTIRLWD-LETGECVRTLTGHTSYVSSVAFSP 103

Query: 102 DGTEIVVATLDGQLIMFDVESAAQVGSVEARRD-------------LDSGRLDT-----D 143
           DG  +  ++ D  + ++DVE+   + ++    D             + S   D      D
Sbjct: 104 DGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWD 163

Query: 144 LVTRE--QSLKA--KAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSL 199
           L T +   +L      V++V +S DG  +L++     I ++    G  L         +L
Sbjct: 164 LRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCL--------GTL 215

Query: 200 DGINDFINRRKMTEFGNVSLIETRE----THEGGNVVLKLPGVKKGDMAARVLKPEVRVF 255
            G  + +N        +V+            E G +  ++  ++ G+    +      V 
Sbjct: 216 RGHENGVN--------SVAFSPDGYLLASGSEDGTI--RVWDLRTGECVQTLSGHTNSVT 265

Query: 256 CVKFSPTGQAWVAATTEG-VHIYS 278
            + +SP G+   + + +G + I+ 
Sbjct: 266 SLAWSPDGKRLASGSADGTIRIWD 289

Length = 289

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 59.3 bits (142), Expect = 3e-09
 Identities = 34/157 (21%), Positives = 67/157 (42%), Gaps = 20/157 (12%)

Query: 42  VLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKP 101
            L+GH  PVS + FSP      + S S D T++LW+         T+   SD++  ++ P
Sbjct: 193 TLAGHTDPVSSLAFSPDGGLL-IASGSSDGTIRLWDLSTGKLLRSTLSGHSDSVVSSFSP 251

Query: 102 DGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCY 161
           DG+ +   + DG + ++D+ S++ +    +                       +V +V +
Sbjct: 252 DGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHS-------------------SSVLSVAF 292

Query: 162 SADGSCILAAGQSKYICIYSSREGILLKKFTITQNKS 198
           S DG  + +      + ++    G LL   T+  ++ 
Sbjct: 293 SPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEG 329

Length = 466

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 56.2 bits (136), Expect = 2e-08
 Identities = 32/141 (22%), Positives = 63/141 (44%), Gaps = 24/141 (17%)

Query: 42  VLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDAL-CVAYK 100
            L+GH G V+ + FSP      ++S+S D T+KLW+ + T     T++   + +  VA+ 
Sbjct: 172 TLTGHTGEVNSVAFSP--DGEKLLSSSSDGTIKLWD-LSTGKCLGTLRGHENGVNSVAFS 228

Query: 101 PDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVC 160
           PDG  +   + DG + ++D+ +   V ++                         +V+++ 
Sbjct: 229 PDGYLLASGSEDGTIRVWDLRTGECVQTLSG--------------------HTNSVTSLA 268

Query: 161 YSADGSCILAAGQSKYICIYS 181
           +S DG  + +      I I+ 
Sbjct: 269 WSPDGKRLASGSADGTIRIWD 289

Length = 289

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 46.6 bits (111), Expect = 3e-07
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 42 VLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWN 77
           L GH GPV+ + FSP      + S S D TV++W+
Sbjct: 6  TLKGHTGPVTSVAFSP--DGNLLASGSDDGTVRVWD 39

Length = 39

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 45.8 bits (109), Expect = 7e-07
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 42 VLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWN 77
           L GH GPV+ + FSP      + S S D T+KLW+
Sbjct: 7  TLKGHTGPVTSVAFSP--DGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 48.9 bits (115), Expect = 6e-06
 Identities = 74/428 (17%), Positives = 141/428 (32%), Gaps = 62/428 (14%)

Query: 36  RVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDAL 95
             L   +L GHE  ++ I FSP      ++S S D T+KLW+    +   ++++ L D+ 
Sbjct: 54  PDLSSLLLRGHEDSITSIAFSP--DGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSS 111

Query: 96  CVAYK---PDGTEIVVAT--LDGQLIMFDVESAAQ-----------VGSVEARRDLDSG- 138
                   PDG  I++A+  LDG + ++D+ +  +           V S+    D     
Sbjct: 112 VSKLALSSPDGNSILLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLA 171

Query: 139 ------------RLDTDLVTREQSLKAKAVSTVCYSADGSCILA-AGQSKYICIYSSREG 185
                        L T       +     VS++ +S DG  ++A       I ++    G
Sbjct: 172 SGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTG 231

Query: 186 ILLKKFTITQNKSLDGINDFINRRKMTEFGNV-SLIETRETHEGGNVVLKLPGVKKGDMA 244
            LL+  +     S   ++ F     +   G+    I   +     +++  L G       
Sbjct: 232 KLLR--STLSGHSDSVVSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSG------- 282

Query: 245 ARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPFLL--------DISIT 295
                    V  V FSP G+   + +++G V ++ L++G +     L         +S +
Sbjct: 283 -----HSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFS 337

Query: 296 PQSVKEALADKDYAKALMMSLKLNEQGLIIHVLENIRTRDIALTVRSLA------EIYLE 349
           P          D     +  L+  +    +    N+ +   +   R ++       + L 
Sbjct: 338 PDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGHSNVLSVSFSPDGRVVSSGSTDGTVRLW 397

Query: 350 KLLKFIAAMLEVSKHIEFYVSWVSQILMVLKSPSQTTLVHLQRNLNKKYSDLAKISCQFD 409
            L                     S     L S S    + L        S       +  
Sbjct: 398 DLSTGSLLRNLDGHTSRVTSLDFSPDGKSLASGSSDNTIRLWDLKTSLKSVSFSPDGKVL 457

Query: 410 DTKFLPPT 417
            +K    +
Sbjct: 458 ASKSSDLS 465

Length = 466

>gnl|CDD|204007 pfam08625, Utp13, Utp13 specific WD40 associated domain

 Score = 45.6 bits (109), Expect = 8e-06
 Identities = 24/101 (23%), Positives = 53/101 (52%), Gaps = 14/101 (13%)

Query: 297 QSVKEALADKDYAKALMMSLKLNEQGLIIHVLENIRTRDIAL-------TVRSLAEIYLE 349
           Q +   L + DY++AL+++L L+    +++VL+++   + ++       T+  L +  LE
Sbjct: 2   QELSNLLREGDYSEALLLALTLDHPHRLLNVLKSVIEDEDSIGSDELEETIGRLRKDQLE 61

Query: 350 KLLKFIAAMLEVSKHIEFYVSWVSQILM--VLKSPSQTTLV 388
           +LLKFI      ++        V+Q+++  +L+S     L+
Sbjct: 62  RLLKFIRDWNTNART-----CHVAQLVLSVILRSFPPEELL 97

Utp13 is a component of the five protein Pwp2 complex that forms part of a stable particle subunit independent of the U3 small nucleolar ribonucleoprotein that is essential for the initial assembly steps of the 90S pre-ribosome. Pwp2 is capable of interacting directly with the 35 S pre-rRNA 5' end. Length = 138

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 36/172 (20%), Positives = 74/172 (43%), Gaps = 22/172 (12%)

Query: 36  RVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDAL 95
           ++L    L GHEGPVS + FSP  S   +   S D T++LW+ + T    +T++  S+ L
Sbjct: 317 KLLSSLTLKGHEGPVSSLSFSPDGSLL-VSGGSDDGTIRLWD-LRTGKPLKTLEGHSNVL 374

Query: 96  CVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKA 155
            V++ PDG  +   + DG + ++D+ + + + +++                         
Sbjct: 375 SVSFSPDGRVVSSGSTDGTVRLWDLSTGSLLRNLDGHTSR-------------------- 414

Query: 156 VSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFIN 207
           V+++ +S DG  + +      I ++  +  +    F+          +D   
Sbjct: 415 VTSLDFSPDGKSLASGSSDNTIRLWDLKTSLKSVSFSPDGKVLASKSSDLSV 466

Length = 466

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	703
KOG0291|consensus	893		100.0
KOG2624|consensus	403		100.0
KOG0319|consensus	775		100.0
KOG0272|consensus	459		100.0
KOG0271|consensus	480		100.0
KOG0271|consensus	480		100.0
KOG0279|consensus	315		100.0
KOG0272|consensus	459		99.98
KOG0286|consensus	343		99.97
KOG0263|consensus	707		99.97
KOG0279|consensus	315		99.97
KOG0315|consensus	311		99.96
KOG0263|consensus	707		99.96
KOG0286|consensus	343		99.96
KOG0315|consensus	311		99.96
KOG0285|consensus	460		99.96
KOG0273|consensus	524		99.96
KOG0284|consensus	464		99.96
KOG0295|consensus	406		99.96
KOG0266|consensus	456		99.95
KOG0285|consensus	460		99.95
KOG0310|consensus	487		99.95
KOG0645|consensus	312		99.95
KOG0291|consensus	893		99.95
KOG0306|consensus	888		99.94
KOG0318|consensus	603		99.94
KOG0266|consensus	456		99.94
KOG0265|consensus	338		99.94
KOG0295|consensus	406		99.94
KOG2624|consensus	403		99.94
KOG0319|consensus	775		99.94
KOG0265|consensus	338		99.94
KOG0284|consensus	464		99.94
KOG0316|consensus	307		99.94
KOG0316|consensus	307		99.93
KOG0273|consensus	524		99.93
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	99.93
KOG0292|consensus	1202		99.93
KOG0282|consensus	503		99.93
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	99.93
KOG0973|consensus	942		99.93
PTZ00421	493	coronin; Provisional	99.93
KOG0276|consensus	794		99.93
PTZ00420	568	coronin; Provisional	99.93
KOG0645|consensus	312		99.93
KOG0296|consensus	399		99.93
KOG0282|consensus	503		99.93
KOG0281|consensus	499		99.93
KOG0643|consensus	327		99.92
PLN00181	793	protein SPA1-RELATED; Provisional	99.92
KOG0293|consensus	519		99.92
KOG0278|consensus	334		99.91
KOG0313|consensus	423		99.91
KOG0275|consensus	508		99.91
KOG0296|consensus	399		99.91
KOG0276|consensus	794		99.91
KOG1407|consensus	313		99.91
KOG0318|consensus	603		99.9
PLN02872	395	triacylglycerol lipase	99.9
KOG0281|consensus	499		99.9
PLN00181	793	protein SPA1-RELATED; Provisional	99.9
KOG0643|consensus	327		99.9
KOG0292|consensus	1202		99.9
KOG0278|consensus	334		99.9
KOG0277|consensus	311		99.9
KOG0313|consensus	423		99.9
KOG0268|consensus	433		99.9
KOG0306|consensus	888		99.89
KOG0283|consensus	712		99.89
KOG0640|consensus	430		99.89
KOG1407|consensus	313		99.89
KOG0283|consensus	712		99.89
KOG0277|consensus	311		99.89
KOG0305|consensus	484		99.89
KOG1446|consensus	311		99.89
KOG0288|consensus	459		99.88
KOG0289|consensus	506		99.88
KOG0300|consensus	481		99.88
KOG0772|consensus	641		99.88
KOG0294|consensus	362		99.87
KOG0274|consensus	537		99.87
KOG0293|consensus	519		99.87
PTZ00421	493	coronin; Provisional	99.87
KOG0772|consensus	641		99.87
KOG0640|consensus	430		99.87
KOG1446|consensus	311		99.87
KOG0647|consensus	347		99.87
KOG0305|consensus	484		99.87
KOG0275|consensus	508		99.87
PTZ00420	568	coronin; Provisional	99.86
KOG0308|consensus	735		99.86
KOG0274|consensus	537		99.86
KOG0641|consensus	350		99.86
KOG0288|consensus	459		99.85
KOG0269|consensus	839		99.85
KOG0310|consensus	487		99.85
KOG0300|consensus	481		99.85
KOG0264|consensus	422		99.85
KOG0308|consensus	735		99.84
KOG0289|consensus	506		99.84
KOG0267|consensus	825		99.84
KOG0299|consensus	479		99.84
KOG0973|consensus	942		99.83
KOG1036|consensus	323		99.83
KOG1539|consensus	910		99.83
KOG1274|consensus	933		99.83
KOG0639|consensus	705		99.83
KOG1332|consensus	299		99.83
KOG1332|consensus	299		99.82
KOG0267|consensus	825		99.82
KOG2096|consensus	420		99.81
KOG0646|consensus	476		99.81
KOG0301|consensus	745		99.8
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.8
KOG0647|consensus	347		99.8
KOG1539|consensus	910		99.8
KOG0299|consensus	479		99.8
KOG0264|consensus	422		99.8
KOG1063|consensus	764		99.79
KOG1408|consensus	1080		99.79
KOG2445|consensus	361		99.78
KOG1273|consensus	405		99.78
KOG4283|consensus	397		99.78
KOG0268|consensus	433		99.78
KOG0303|consensus	472		99.77
KOG0639|consensus	705		99.77
KOG0641|consensus	350		99.77
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.77
KOG0301|consensus	745		99.77
KOG1036|consensus	323		99.77
KOG0321|consensus	720		99.77
KOG1408|consensus	1080		99.76
KOG1274|consensus	933		99.76
KOG2055|consensus	514		99.76
KOG2055|consensus	514		99.76
KOG0302|consensus	440		99.76
KOG0269|consensus	839		99.75
KOG1009|consensus	434		99.73
KOG2048|consensus	691		99.73
KOG0646|consensus	476		99.73
KOG1034|consensus	385		99.73
KOG0650|consensus	733		99.72
KOG4283|consensus	397		99.72
KOG2106|consensus	626		99.71
KOG0270|consensus	463		99.7
KOG4328|consensus	498		99.7
KOG2096|consensus	420		99.7
KOG0302|consensus	440		99.7
KOG2048|consensus	691		99.69
KOG0307|consensus	1049		99.69
KOG1273|consensus	405		99.69
KOG0642|consensus	577		99.68
KOG0307|consensus	1049		99.68
KOG0270|consensus	463		99.67
KOG2445|consensus	361		99.67
KOG2919|consensus	406		99.66
PLN02872	395	triacylglycerol lipase	99.65
KOG0294|consensus	362		99.65
KOG0321|consensus	720		99.65
KOG4328|consensus	498		99.65
KOG4378|consensus	673		99.64
KOG4378|consensus	673		99.64
KOG2106|consensus	626		99.64
KOG1007|consensus	370		99.62
PRK01742	429	tolB translocation protein TolB; Provisional	99.62
KOG0771|consensus	398		99.61
KOG1538|consensus	1081		99.61
KOG0644|consensus	1113		99.61
KOG1063|consensus	764		99.6
KOG1524|consensus	737		99.58
PRK03629	429	tolB translocation protein TolB; Provisional	99.57
KOG0290|consensus	364		99.56
KOG1007|consensus	370		99.56
KOG0650|consensus	733		99.56
KOG1034|consensus	385		99.55
KOG2919|consensus	406		99.54
KOG2110|consensus	391		99.54
KOG1587|consensus	555		99.53
PRK04922	433	tolB translocation protein TolB; Provisional	99.52
KOG1445|consensus	1012		99.52
KOG1009|consensus	434		99.52
PRK05137	435	tolB translocation protein TolB; Provisional	99.52
PRK11028	330	6-phosphogluconolactonase; Provisional	99.51
KOG1310|consensus	758		99.5
COG2319	466	FOG: WD40 repeat [General function prediction only	99.5
KOG1524|consensus	737		99.49
COG2319	466	FOG: WD40 repeat [General function prediction only	99.48
KOG0649|consensus	325		99.47
KOG0290|consensus	364		99.47
PRK02889	427	tolB translocation protein TolB; Provisional	99.47
KOG1188|consensus	376		99.46
KOG1445|consensus	1012		99.45
PRK01742	429	tolB translocation protein TolB; Provisional	99.44
KOG0771|consensus	398		99.44
PRK11028	330	6-phosphogluconolactonase; Provisional	99.43
KOG0322|consensus	323		99.42
KOG2394|consensus	636		99.42
KOG1538|consensus	1081		99.42
KOG0303|consensus	472		99.42
KOG1240|consensus	1431		99.42
KOG0649|consensus	325		99.41
KOG4227|consensus	609		99.41
KOG0642|consensus	577		99.4
KOG1272|consensus	545		99.39
KOG2110|consensus	391		99.39
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.38
PRK00178	430	tolB translocation protein TolB; Provisional	99.38
KOG2139|consensus	445		99.38
KOG1188|consensus	376		99.37
KOG1523|consensus	361		99.36
KOG1517|consensus	1387		99.36
KOG0644|consensus	1113		99.34
KOG2139|consensus	445		99.34
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.33
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.33
PRK01029	428	tolB translocation protein TolB; Provisional	99.33
KOG1963|consensus	792		99.32
KOG3881|consensus	412		99.32
PRK04792	448	tolB translocation protein TolB; Provisional	99.31
KOG4497|consensus	447		99.3
KOG0322|consensus	323		99.3
PRK05137	435	tolB translocation protein TolB; Provisional	99.3
PRK03629	429	tolB translocation protein TolB; Provisional	99.29
KOG4227|consensus	609		99.29
KOG1523|consensus	361		99.27
KOG1272|consensus	545		99.27
PRK04922	433	tolB translocation protein TolB; Provisional	99.26
PRK02889	427	tolB translocation protein TolB; Provisional	99.24
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.24
KOG1963|consensus	792		99.24
KOG1517|consensus	1387		99.22
KOG1587|consensus	555		99.21
KOG2394|consensus	636		99.18
KOG1334|consensus	559		99.18
KOG4547|consensus	541		99.18
KOG2111|consensus	346		99.15
KOG2111|consensus	346		99.15
KOG2321|consensus	703		99.14
KOG4497|consensus	447		99.14
PF04083	63	Abhydro_lipase: Partial alpha/beta-hydrolase lipas	99.12
PRK00178	430	tolB translocation protein TolB; Provisional	99.12
KOG1354|consensus	433		99.11
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.11
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.1
PRK04792	448	tolB translocation protein TolB; Provisional	99.08
PRK04043	419	tolB translocation protein TolB; Provisional	99.07
KOG3881|consensus	412		99.06
KOG2321|consensus	703		99.03
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	99.01
KOG1334|consensus	559		99.0
KOG1240|consensus	1431		98.99
PRK01029	428	tolB translocation protein TolB; Provisional	98.97
PRK10115	686	protease 2; Provisional	98.96
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	98.93
KOG4190|consensus	1034		98.91
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	98.89
KOG1310|consensus	758		98.86
KOG0974|consensus	967		98.86
KOG4547|consensus	541		98.84
PRK04043	419	tolB translocation protein TolB; Provisional	98.82
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	98.82
KOG0974|consensus	967		98.81
KOG2315|consensus	566		98.8
PF08625	141	Utp13: Utp13 specific WD40 associated domain; Inte	98.77
KOG1354|consensus	433		98.76
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	98.75
KOG1064|consensus	2439		98.7
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	98.69
COG4946	668	Uncharacterized protein related to the periplasmic	98.68
KOG0309|consensus	1081		98.68
KOG1409|consensus	404		98.67
KOG1832|consensus	1516		98.65
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	98.63
COG4946	668	Uncharacterized protein related to the periplasmic	98.61
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	98.59
KOG4532|consensus	344		98.59
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	98.57
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	98.56
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	98.54
KOG1064|consensus	2439		98.51
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	98.48
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	98.45
KOG2315|consensus	566		98.44
KOG0280|consensus	339		98.44
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	98.44
KOG2695|consensus	425		98.41
PF04003	110	Utp12: Dip2/Utp12 Family; InterPro: IPR007148 A la	98.4
KOG2041|consensus	1189		98.4
KOG2695|consensus	425		98.34
KOG3914|consensus	390		98.34
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	98.33
KOG4532|consensus	344		98.31
KOG1645|consensus	463		98.29
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	98.29
KOG4190|consensus	1034		98.27
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	98.27
KOG3914|consensus	390		98.24
KOG1409|consensus	404		98.23
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	98.23
KOG2314|consensus	698		98.22
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	98.22
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	98.2
KOG2041|consensus	1189		98.2
KOG0280|consensus	339		98.2
KOG2314|consensus	698		98.19
KOG1912|consensus	1062		98.15
KOG2066|consensus	846		98.13
KOG1920|consensus	1265		98.11
KOG1275|consensus	1118		98.11
COG1506	620	DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept	98.06
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	98.06
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	98.06
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	98.04
KOG1912|consensus	1062		98.02
KOG2066|consensus	846		98.01
KOG0882|consensus	558		97.98
KOG2114|consensus	933		97.92
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	97.91
KOG3617|consensus	1416		97.9
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	97.87
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	97.86
KOG0882|consensus	558		97.83
PF00561	230	Abhydrolase_1: alpha/beta hydrolase fold A web pag	97.82
KOG4714|consensus	319		97.8
KOG0309|consensus	1081		97.79
KOG1832|consensus	1516		97.77
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	97.73
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	97.71
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	97.7
KOG3621|consensus	726		97.68
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	97.67
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	97.65
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	97.64
PF00561	230	Abhydrolase_1: alpha/beta hydrolase fold A web pag	97.62
KOG2114|consensus	933		97.59
KOG4714|consensus	319		97.55
KOG1920|consensus	1265		97.52
KOG1008|consensus	783		97.43
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	97.42
COG3391	381	Uncharacterized conserved protein [Function unknow	97.42
TIGR01836	350	PHA_synth_III_C poly(R)-hydroxyalkanoic acid synth	97.27
KOG1645|consensus	463		97.26
TIGR01836	350	PHA_synth_III_C poly(R)-hydroxyalkanoic acid synth	97.26
KOG1275|consensus	1118		97.24
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	97.23
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	97.18
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	97.12
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	97.1
KOG4640|consensus	665		97.09
PRK02888	635	nitrous-oxide reductase; Validated	97.01
PF00326	213	Peptidase_S9: Prolyl oligopeptidase family This fa	97.0
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	96.99
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	96.97
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	96.96
PRK02888	635	nitrous-oxide reductase; Validated	96.95
KOG4640|consensus	665		96.88
PRK13616	591	lipoprotein LpqB; Provisional	96.87
KOG4649|consensus	354		96.82
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	96.78
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	96.73
PF04192	237	Utp21: Utp21 specific WD40 associated putative dom	96.72
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	96.7
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	96.61
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	96.6
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	96.6
KOG1008|consensus	783		96.58
COG3391	381	Uncharacterized conserved protein [Function unknow	96.57
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	96.5
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	96.41
KOG4649|consensus	354		96.39
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	96.36
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	96.31
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	96.26
PRK13616	591	lipoprotein LpqB; Provisional	96.25
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	96.21
PRK13604	307	luxD acyl transferase; Provisional	96.08
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	96.02
PRK13604	307	luxD acyl transferase; Provisional	95.91
KOG3617|consensus	1416		95.89
TIGR01838	532	PHA_synth_I poly(R)-hydroxyalkanoic acid synthase,	95.83
COG2267	298	PldB Lysophospholipase [Lipid metabolism]	95.81
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	95.73
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	95.63
PLN02733	440	phosphatidylcholine-sterol O-acyltransferase	95.62
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	95.6
KOG2281|consensus	867		95.6
COG4757	281	Predicted alpha/beta hydrolase [General function p	95.52
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	95.51
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	95.45
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	95.44
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	95.39
KOG2079|consensus	1206		95.38
TIGR01839	560	PHA_synth_II poly(R)-hydroxyalkanoic acid synthase	95.29
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	95.26
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	95.25
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	95.24
KOG3621|consensus	726		95.2
KOG2395|consensus	644		95.18
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	95.15
PHA02713	557	hypothetical protein; Provisional	95.05
TIGR01838	532	PHA_synth_I poly(R)-hydroxyalkanoic acid synthase,	94.99
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	94.99
KOG1454|consensus	326		94.96
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	94.75
PF09384	148	UTP15_C: UTP15 C terminal; InterPro: IPR018983 Thi	94.7
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	94.66
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	94.6
PRK10749	330	lysophospholipase L2; Provisional	94.54
KOG2444|consensus	238		94.39
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	94.37
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	94.3
PHA02857	276	monoglyceride lipase; Provisional	94.26
PLN02298	330	hydrolase, alpha/beta fold family protein	94.24
COG3243	445	PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid me	94.19
KOG2395|consensus	644		94.13
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	94.06
TIGR01839	560	PHA_synth_II poly(R)-hydroxyalkanoic acid synthase	93.97
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	93.87
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	93.73
PF01674	219	Lipase_2: Lipase (class 2); InterPro: IPR002918 Li	93.6
COG3243	445	PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid me	93.52
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	93.49
KOG4499|consensus	310		93.05
PRK10566	249	esterase; Provisional	93.04
TIGR02240	276	PHA_depoly_arom poly(3-hydroxyalkanoate) depolymer	93.01
TIGR03101	266	hydr2_PEP hydrolase, ortholog 2, exosortase system	93.0
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	92.88
KOG4409|consensus	365		92.88
PHA03098	534	kelch-like protein; Provisional	92.81
PF07819	225	PGAP1: PGAP1-like protein; InterPro: IPR012908 The	92.79
cd00707	275	Pancreat_lipase_like Pancreatic lipase-like enzyme	92.66
PRK10673	255	acyl-CoA esterase; Provisional	92.59
PF12697	228	Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3	92.48
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	92.26
TIGR03695	251	menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene	91.92
KOG2079|consensus	1206		91.75
KOG4441|consensus	571		91.7
PRK10749	330	lysophospholipase L2; Provisional	91.69
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	91.69
TIGR03101	266	hydr2_PEP hydrolase, ortholog 2, exosortase system	91.66
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	91.62
KOG1897|consensus	1096		91.6
PF02450	389	LCAT: Lecithin:cholesterol acyltransferase; InterP	91.53
PF13449	326	Phytase-like: Esterase-like activity of phytase	91.34
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	91.33
PLN02652	395	hydrolase; alpha/beta fold family protein	91.23
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	91.03
TIGR03695	251	menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene	91.01
PLN02733	440	phosphatidylcholine-sterol O-acyltransferase	90.95
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	90.9
PF11288	207	DUF3089: Protein of unknown function (DUF3089); In	90.82
PHA02857	276	monoglyceride lipase; Provisional	90.74
KOG4441|consensus	571		90.66
KOG4499|consensus	310		90.62
PF06057	192	VirJ: Bacterial virulence protein (VirJ); InterPro	90.62
COG3823	262	Glutamine cyclotransferase [Posttranslational modi	90.53
KOG2280|consensus	829		90.52
PF12697	228	Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3	90.5
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	90.31
PF13449	326	Phytase-like: Esterase-like activity of phytase	90.29
TIGR01250	288	pro_imino_pep_2 proline-specific peptidases, Bacil	90.15
PLN02652	395	hydrolase; alpha/beta fold family protein	90.07
PRK10115	686	protease 2; Provisional	90.04
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	90.03
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	89.77
TIGR00976	550	/NonD putative hydrolase, CocE/NonD family. This m	89.67
KOG2444|consensus	238		89.67
KOG1455|consensus	313		89.65
PRK05077	414	frsA fermentation/respiration switch protein; Revi	89.64
KOG2280|consensus	829		89.55
PLN02517	642	phosphatidylcholine-sterol O-acyltransferase	89.45
PLN02298	330	hydrolase, alpha/beta fold family protein	89.45
KOG1552|consensus	258		89.37
PF05935	477	Arylsulfotrans: Arylsulfotransferase (ASST); Inter	89.33
PRK00870	302	haloalkane dehalogenase; Provisional	89.29
PF14761	215	HPS3_N: Hermansky-Pudlak syndrome 3	89.25
TIGR01607	332	PST-A Plasmodium subtelomeric family (PST-A). Thes	89.16
KOG2369|consensus	473		89.13
TIGR03611	257	RutD pyrimidine utilization protein D. This protei	88.99
PRK10985	324	putative hydrolase; Provisional	88.9
PRK10985	324	putative hydrolase; Provisional	88.85
COG2267	298	PldB Lysophospholipase [Lipid metabolism]	88.77
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	88.53
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	88.37
TIGR01250	288	pro_imino_pep_2 proline-specific peptidases, Bacil	88.27
KOG2100|consensus	755		88.14
PRK00870	302	haloalkane dehalogenase; Provisional	88.0
PLN02511	388	hydrolase	87.94
PLN02511	388	hydrolase	87.69
PLN02824	294	hydrolase, alpha/beta fold family protein	87.68
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	87.52
TIGR02427	251	protocat_pcaD 3-oxoadipate enol-lactonase. Members	87.43
KOG3630|consensus	1405		87.41
PRK10349	256	carboxylesterase BioH; Provisional	87.37
TIGR03100	274	hydr1_PEP hydrolase, ortholog 1, exosortase system	87.37
PF05990	233	DUF900: Alpha/beta hydrolase of unknown function (	87.33
PLN02578	354	hydrolase	87.28
TIGR02427	251	protocat_pcaD 3-oxoadipate enol-lactonase. Members	87.2
PLN03087	481	BODYGUARD 1 domain containing hydrolase; Provision	87.16
PRK07868	994	acyl-CoA synthetase; Validated	87.02

>KOG0291|consensus

Probab=100.00  E-value=9e-46  Score=389.30  Aligned_cols=389  Identities=50%  Similarity=0.871  Sum_probs=363.5

Q ss_pred             CCceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCC
Q psy7108          26 PGVKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGT  104 (703)
Q Consensus        26 ~~v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~  104 (703)
                      .++.+|+ +||+++  .+|.||.+||.+++|+|  +++.|+|+|+|++||+||+-......+.+.+...+..++|+|||+
T Consensus       458 F~IfvWS~qTGqll--DiLsGHEgPVs~l~f~~--~~~~LaS~SWDkTVRiW~if~s~~~vEtl~i~sdvl~vsfrPdG~  533 (893)
T KOG0291|consen  458 FEIFVWSVQTGQLL--DILSGHEGPVSGLSFSP--DGSLLASGSWDKTVRIWDIFSSSGTVETLEIRSDVLAVSFRPDGK  533 (893)
T ss_pred             EEEEEEEeecCeee--ehhcCCCCcceeeEEcc--ccCeEEeccccceEEEEEeeccCceeeeEeeccceeEEEEcCCCC
Confidence            3466777 699999  99999999999999999  999999999999999999988877788889999999999999999


Q ss_pred             EEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCC
Q psy7108         105 EIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSRE  184 (703)
Q Consensus       105 ~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~  184 (703)
                      .||+++.||.|.+||...+.++.++++..++.+++...+..+..++..++.++.+++++||+.|++|+..+.|++||+++
T Consensus       534 elaVaTldgqItf~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~sa~~K~Ftti~ySaDG~~IlAgG~sn~iCiY~v~~  613 (893)
T KOG0291|consen  534 ELAVATLDGQITFFDIKEAVQVGSIDGRKDLSGGRKETDRITAENSAKGKTFTTICYSADGKCILAGGESNSICIYDVPE  613 (893)
T ss_pred             eEEEEEecceEEEEEhhhceeeccccchhhccccccccceeehhhcccCCceEEEEEcCCCCEEEecCCcccEEEEECch
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCC
Q psy7108         185 GILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQ  264 (703)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~  264 (703)
                      +..+++|+...+.++++..+.+++-.+++.|..-++....+..+++..+.+...+.+.+-.+-..+.-.|.++.|||+|+
T Consensus       614 ~vllkkfqiS~N~sLdg~~efln~rkmtEfG~~~LiD~e~~~~e~~i~~~lpG~~~gdlssRr~rpeIrv~sv~fsPtgr  693 (893)
T KOG0291|consen  614 GVLLKKFQISDNRSLDGVLEFLNRRKMTEFGNMDLIDTEESDLEGRIDIALPGVQRGDLSSRRFRPEIRVTSVQFSPTGR  693 (893)
T ss_pred             hheeeeEEeccccchhHHHHHhccccccccCCccccccccccccccccccCCccccCCccccccCceEEEEEEEECCCcC
Confidence            99999999999999999999999999999999888877666566666777777777765555556777899999999999


Q ss_pred             EEEEEeCCCEEEEEcCCCceecceeeeEEEccchhhhHhhcCCcceEEEEEEecCchhHHHHHhhccCcchHHHHHhhcc
Q psy7108         265 AWVAATTEGVHIYSLDSGYVFDPFLLDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIHVLENIRTRDIALTVRSLA  344 (703)
Q Consensus       265 ~l~s~s~Dgv~iwd~~~~~~~~~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~~~~~~v~~~~~~~~i~~~~~~l~  344 (703)
                      .+|+++.+|+.||.+++.-.++++.+++.++|..++.++...++.+++.+++++|+++++.++++++|...|+.++.+||
T Consensus       694 aFAaatTEGl~IYsld~~~~FDPf~LD~~vTPe~v~~al~~qey~~AlvmslRLNe~~lI~evlesvp~~~Ie~V~~~Lp  773 (893)
T KOG0291|consen  694 AFAAATTEGLLIYSLDTTILFDPFDLDVDVTPESVREALREQEYLKALVMSLRLNEYKLIKEVLESVPIKDIELVASSLP  773 (893)
T ss_pred             eeeeecccceEEEecCCceEEcccccccccCHHHHHHHHhcchHHHHHHHHHhcCHHHHHHHHHHhCChhhhhhhhhcCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHH----cCCCchh---hHHHHHHHHHHHHhhhhceecccCCCcccchh
Q psy7108         345 EIYLEKLLKFIAAMLEVSKHIEFYVSWVSQILMV----LKSPSQT---TLVHLQRNLNKKYSDLAKISCQFDDTKFLPPT  417 (703)
Q Consensus       345 ~~~~~~ll~~~~~~~~~~~~~e~~~~~l~~~l~~----l~~~~~~---~l~~L~~~l~~~~~~~~~l~~~~n~~~~sl~~  417 (703)
                      ..+++++++++.+.+.+++|.|+++.|++.+|..    ++.+...   .+..||+.+.++.+++.++ |..|  ++.|.|
T Consensus       774 ~~y~erll~~l~~~l~~s~HieF~l~W~~~il~~hG~~~~~~~~~~~~~~~~lqk~i~r~~~~l~kl-~~~N--ky~L~~  850 (893)
T KOG0291|consen  774 TAYLERLLKALSRFLENSPHIEFYLRWLRAILTYHGSSLKRRAETLLPALTSLQKSIVRHIDDLSKL-CSLN--KYTLRY  850 (893)
T ss_pred             HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHhhhhhhccceehhhHHHHHHHHHHHHHHHHHHH-hhcc--HHHHHH
Confidence            9999999999999999999999999999999999    6655544   7799999999999999999 9999  899999


Q ss_pred             hhhh
Q psy7108         418 LFAR  421 (703)
Q Consensus       418 ~la~  421 (703)
                      +++.
T Consensus       851 lv~~  854 (893)
T KOG0291|consen  851 LVSK  854 (893)
T ss_pred             HHhh
Confidence            9996

>KOG2624|consensus

Probab=100.00  E-value=2.3e-39  Score=337.88  Aligned_cols=191  Identities=23%  Similarity=0.278  Sum_probs=170.3

Q ss_pred             CcCCccceeeeecccchhhhhhhhcCCcccccccccccCCCCCCcCCCcccceeecccCcCCCCCCccccccCchhhhhc
Q psy7108         447 TSEQNKFYRFSCDFNVYTLELISRLGPLRIKPKVEKMETGSSDEESSKDDETEIRVLDEDVPRSSDTGDIQLKSTRMNEL  526 (703)
Q Consensus       447 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  526 (703)
                      +.+..+.|+|++|.|.++|+|||||...||+.+.                                    .+|||||++|
T Consensus        37 ~~~~i~~~gy~~E~h~V~T~DgYiL~lhRIp~~~------------------------------------~~rp~Vll~H   80 (403)
T KOG2624|consen   37 TPEIIEKYGYPVEEHEVTTEDGYILTLHRIPRGK------------------------------------KKRPVVLLQH   80 (403)
T ss_pred             HHHHHHHcCCceEEEEEEccCCeEEEEeeecCCC------------------------------------CCCCcEEEee
Confidence            4556789999999999999999999999999544                                    3699999999


Q ss_pred             ccCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhh-hhhhhhcccccchhhhcccccceeeee
Q psy7108         527 GLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVL-WAQSAFLGNLVTKDMLEGLYGIYALNI  605 (703)
Q Consensus       527 g~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~s~  605 (703)
                      |++++++  .|++|.+.++..++++  ++|||||++|+|++.|++++..+-. ..+                 +||+|||
T Consensus        81 GLl~sS~--~Wv~n~p~~sLaf~La--daGYDVWLgN~RGn~ySr~h~~l~~~~~~-----------------~FW~FS~  139 (403)
T KOG2624|consen   81 GLLASSS--SWVLNGPEQSLAFLLA--DAGYDVWLGNNRGNTYSRKHKKLSPSSDK-----------------EFWDFSW  139 (403)
T ss_pred             ccccccc--cceecCccccHHHHHH--HcCCceeeecCcCcccchhhcccCCcCCc-----------------ceeecch
Confidence            9999999  9999998888888888  9999999999999999986654443 232                 8999999


Q ss_pred             eeeeecchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccccCCCCChhhHH--------
Q psy7108         606 FQVGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLGNLVTRDMLE--------  677 (703)
Q Consensus       606 ~e~~~~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~~~~~~~~~~~--------  677 (703)
                      +|||.|||||+||||+..|+++|++||||||||+++|+++|++|+++.||+.++||||++++++.+++....        
T Consensus       140 ~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~k~~~~~~~~~~~~~~~~~  219 (403)
T KOG2624|consen  140 HEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFPKHIKSLLNKFLDPFLGAF  219 (403)
T ss_pred             hhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhhhcccccHHHHhhhhhhhhh
Confidence            999999999999999999999999999999999999999999999999999999999999999998882211        


Q ss_pred             -HHHHhhccccccchhHh
Q psy7108         678 -GLYGIYAEYQTISGYFI  694 (703)
Q Consensus       678 -~~~~~~~~~~~~~~~~~  694 (703)
                       .+..+||..+|+|...+
T Consensus       220 ~~~~~~fg~~~f~p~~~~  237 (403)
T KOG2624|consen  220 SLLPLLFGRKEFLPSNLF  237 (403)
T ss_pred             hHHHHhcCCccccchhhH
Confidence             25678899999999953

>KOG0319|consensus

Probab=100.00  E-value=2.5e-36  Score=318.33  Aligned_cols=369  Identities=19%  Similarity=0.227  Sum_probs=303.1

Q ss_pred             eecccCCceEEecCCceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCcee---E----
Q psy7108          13 RETHEGGNVVLKLPGVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQ---H----   85 (703)
Q Consensus        13 ~~~~~~~~~~i~~~~v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~---~----   85 (703)
                      +++..+.+..+++|........--++  ....||+..|.+++++.. ...+|+++|.|.++++|++...+..   .    
T Consensus       379 llat~sKD~svilWr~~~~~~~~~~~--a~~~gH~~svgava~~~~-~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~  455 (775)
T KOG0319|consen  379 LLATGSKDKSVILWRLNNNCSKSLCV--AQANGHTNSVGAVAGSKL-GASFFVSVSQDCTLKLWDLPKSKETAFPIVLTC  455 (775)
T ss_pred             EEEEecCCceEEEEEecCCcchhhhh--hhhcccccccceeeeccc-CccEEEEecCCceEEEecCCCcccccccceehh
Confidence            34445555666666431111122334  677899999999999873 5679999999999999999762211   1    


Q ss_pred             --EEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC
Q psy7108          86 --ETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA  163 (703)
Q Consensus        86 --~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp  163 (703)
                        ....|...|+|++.+|+.+.+|+||.|++.++|+++..+...++.+|+.                    .|+++.|+|
T Consensus       456 ~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~R--------------------Gvw~V~Fs~  515 (775)
T KOG0319|consen  456 RYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTR--------------------GVWCVSFSK  515 (775)
T ss_pred             hHHHHhhcccccceEecCCCceEEecccccceeeecccCceEEEEeeCCcc--------------------ceEEEEecc
Confidence              1234889999999999999999999999999999999999999999876                    899999999


Q ss_pred             CCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcc
Q psy7108         164 DGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDM  243 (703)
Q Consensus       164 dg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~  243 (703)
                      ..+.++++|.|++|+||.+.+..|+++|.+|..        .|..+.|-.+|+.++.++.+|      .+++|+++++++
T Consensus       516 ~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~--------aVlra~F~~~~~qliS~~adG------liKlWnikt~eC  581 (775)
T KOG0319|consen  516 NDQLLATCSGDKTVKIWSISTFSCLKTFEGHTS--------AVLRASFIRNGKQLISAGADG------LIKLWNIKTNEC  581 (775)
T ss_pred             ccceeEeccCCceEEEEEeccceeeeeecCccc--------eeEeeeeeeCCcEEEeccCCC------cEEEEeccchhh
Confidence            999999999999999999999999999987666        899999999999999988875      899999999999


Q ss_pred             ceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceeccee--eeE-EEccchhhhHhhcCCcceEEEEEEecC
Q psy7108         244 AARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPFL--LDI-SITPQSVKEALADKDYAKALMMSLKLN  319 (703)
Q Consensus       244 ~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~~--~~~-~~spd~~~~~l~sg~~~~~l~la~~l~  319 (703)
                      ...+..|++.|++++.+|.+.+++||+.|| +.+|.-.+.+......  ... ..-.+.+.+++..+.+.+++.+++.+.
T Consensus       582 ~~tlD~H~DrvWaL~~~~~~~~~~tgg~Dg~i~~wkD~Te~~~~ee~~K~~eaieq~QeL~n~l~~~~~~~A~~LA~tLd  661 (775)
T KOG0319|consen  582 EMTLDAHNDRVWALSVSPLLDMFVTGGGDGRIIFWKDVTEEEQNEEQEKREEAIEQEQELENLLSQKRYTKAFVLALTLD  661 (775)
T ss_pred             hhhhhhccceeEEEeecCccceeEecCCCeEEEEeecCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHhHhhcc
Confidence            999999999999999999999999999999 8899765543322111  000 111344557888999999999999999


Q ss_pred             chhHHHHHhhcc----CcchHHHHHhhccHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHH------cCCCchh-hHH
Q psy7108         320 EQGLIIHVLENI----RTRDIALTVRSLAEIYLEKLLKFIAAMLEVSKHIEFYVSWVSQILMV------LKSPSQT-TLV  388 (703)
Q Consensus       320 ~~~~~~~v~~~~----~~~~i~~~~~~l~~~~~~~ll~~~~~~~~~~~~~e~~~~~l~~~l~~------l~~~~~~-~l~  388 (703)
                      .|....++++.+    .++++..++..|..++.+-|++|+..|++++++...+|..|..++++      +..++.. .++
T Consensus       662 ~P~~~f~vi~~~~r~r~~e~l~~av~~L~~dq~~~Ll~~~~~WnTnsk~c~vaQ~vL~~~l~~~~p~el~~~~g~~~~~e  741 (775)
T KOG0319|consen  662 KPHLVFTVINALYRERDPEELGQAVFRLNEDQPEALLQFVVKWNTNSKTCHVAQRVLYEILKRVDPEELVRWPGSGEVVE  741 (775)
T ss_pred             CchhHHHHHHHHHhcCCcHHHHHHHHHhhhhhHHHHHHHHHHhcCCcchhHHHHHHHHHHHhccChHHhhcccchHHHHH
Confidence            999888887632    46678999999999999999999999999999999999999999998      4455555 999


Q ss_pred             HHHHHHHHHHhhhhceecccCCCcccchhhhhhc
Q psy7108         389 HLQRNLNKKYSDLAKISCQFDDTKFLPPTLFARM  422 (703)
Q Consensus       389 ~L~~~l~~~~~~~~~l~~~~n~~~~sl~~~la~~  422 (703)
                      ++.||.++|..+++++ .+..   ..|.|.+..|
T Consensus       742 ~l~PYtqRHf~Rid~~-~~~~---~lLdf~~~eM  771 (775)
T KOG0319|consen  742 ALLPYTQRHFRRIDRL-VQDS---ALLDFTWFEM  771 (775)
T ss_pred             hhhhHHHHHHHHHHHH-hhhh---HHHHHhhhhe
Confidence            9999999999999988 3221   4466766654

>KOG0272|consensus

Probab=100.00  E-value=2.2e-35  Score=293.24  Aligned_cols=267  Identities=21%  Similarity=0.280  Sum_probs=237.5

Q ss_pred             eeecccCCceEEecCC--ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEe
Q psy7108          12 TRETHEGGNVVLKLPG--VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETI   88 (703)
Q Consensus        12 ~~~~~~~~~~~i~~~~--v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~   88 (703)
                      +.|..++...+-..|.  +++|. .+...+  .+|.||++.|.++.|+|..++..+|||+.||++++|++.+...+..+.
T Consensus       181 ~~fS~ds~~laT~swsG~~kvW~~~~~~~~--~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~~l~~l~  258 (459)
T KOG0272|consen  181 CSFSRDSKHLATGSWSGLVKVWSVPQCNLL--QTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQETPLQDLE  258 (459)
T ss_pred             eEeecCCCeEEEeecCCceeEeecCCccee--EEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCcchhhhh
Confidence            3455555555555666  77776 466777  899999999999999993125689999999999999998877888888


Q ss_pred             cCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEE
Q psy7108          89 QLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCI  168 (703)
Q Consensus        89 ~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l  168 (703)
                      +|...|..++|+|+|++|++++.|.+-++||+++++.+...++|..                    .|.+++|.|||..+
T Consensus       259 gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~--------------------~v~~iaf~~DGSL~  318 (459)
T KOG0272|consen  259 GHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGHSK--------------------GVFSIAFQPDGSLA  318 (459)
T ss_pred             cchhhheeeeecCCCceeeecccccchhhcccccchhhHhhccccc--------------------ccceeEecCCCcee
Confidence            9999999999999999999999999999999999998888888765                    89999999999999


Q ss_pred             EEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeec
Q psy7108         169 LAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL  248 (703)
Q Consensus       169 ~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~  248 (703)
                      ++|+.|..-+|||+++++++..+.+|..        .|.+++|+|+|..++++++++      +++|||++..+++..+.
T Consensus       319 ~tGGlD~~~RvWDlRtgr~im~L~gH~k--------~I~~V~fsPNGy~lATgs~Dn------t~kVWDLR~r~~ly~ip  384 (459)
T KOG0272|consen  319 ATGGLDSLGRVWDLRTGRCIMFLAGHIK--------EILSVAFSPNGYHLATGSSDN------TCKVWDLRMRSELYTIP  384 (459)
T ss_pred             eccCccchhheeecccCcEEEEeccccc--------ceeeEeECCCceEEeecCCCC------cEEEeeecccccceecc
Confidence            9999999999999999999998876555        899999999999999988764      99999999999999999


Q ss_pred             CCccceEEEEEcC-CCCEEEEEeCCC-EEEEEcCCCceecce------eeeEEEccchhhhHhhcCCcceEEEEEEe
Q psy7108         249 KPEVRVFCVKFSP-TGQAWVAATTEG-VHIYSLDSGYVFDPF------LLDISITPQSVKEALADKDYAKALMMSLK  317 (703)
Q Consensus       249 ~h~~~V~~l~~sp-dg~~l~s~s~Dg-v~iwd~~~~~~~~~~------~~~~~~spd~~~~~l~sg~~~~~l~la~~  317 (703)
                      +|..-|+.|.|+| .|.+|+|++.|+ ++||...+.++...+      +.++++++++  .+++++++|+++++ |.
T Consensus       385 AH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~d~--~~i~t~s~DRT~KL-W~  458 (459)
T KOG0272|consen  385 AHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSPLKSLAGHEGKVISLDISPDS--QAIATSSFDRTIKL-WR  458 (459)
T ss_pred             cccchhhheEecccCCeEEEEcccCcceeeecCCCcccchhhcCCccceEEEEeccCC--ceEEEeccCceeee-cc
Confidence            9999999999999 678899999999 999999998886655      4789999999  89999999999998 75

>KOG0271|consensus

Probab=100.00  E-value=2.5e-34  Score=281.85  Aligned_cols=256  Identities=17%  Similarity=0.289  Sum_probs=222.9

Q ss_pred             ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeE-EEecCCCcEEEEEEec----
Q psy7108          28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQH-ETIQLLSDALCVAYKP----  101 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~-~~~~~~~~V~~v~~sp----  101 (703)
                      ++.|| .+..++  .+.+||...|.|++|+|  ||+.||||+.||+|++||.+++++.. .+.+|...|++++|.|    
T Consensus       139 vR~WD~~TeTp~--~t~KgH~~WVlcvawsP--Dgk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~  214 (480)
T KOG0271|consen  139 VRLWDLDTETPL--FTCKGHKNWVLCVAWSP--DGKKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLV  214 (480)
T ss_pred             EEeeccCCCCcc--eeecCCccEEEEEEECC--CcchhhccccCCeEEEecCCCCCcccccccCcccceeEEeecccccC
Confidence            45556 366666  89999999999999999  99999999999999999999888764 4556999999999975    


Q ss_pred             -CCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEE
Q psy7108         102 -DGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIY  180 (703)
Q Consensus       102 -dg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lw  180 (703)
                       ..++||+++.||.|+|||+..++++..+.+|..                    +|+|+.|--+| +|++|+.|++|++|
T Consensus       215 p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~--------------------~VTCvrwGG~g-liySgS~DrtIkvw  273 (480)
T KOG0271|consen  215 PPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTA--------------------SVTCVRWGGEG-LIYSGSQDRTIKVW  273 (480)
T ss_pred             CCccceecccCCCCEEEEEccCceEEEEeccCcc--------------------ceEEEEEcCCc-eEEecCCCceEEEE
Confidence             567999999999999999999999999999876                    89999998665 79999999999999


Q ss_pred             ECCCCceEEEEEeccC----------------------------------------------------------------
Q psy7108         181 SSREGILLKKFTITQN----------------------------------------------------------------  196 (703)
Q Consensus       181 D~~~~~~~~~~~~~~~----------------------------------------------------------------  196 (703)
                      +...|.+.+.+++|..                                                                
T Consensus       274 ~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p  353 (480)
T KOG0271|consen  274 RALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNP  353 (480)
T ss_pred             EccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecc
Confidence            9988776655544322                                                                


Q ss_pred             -------CccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEE
Q psy7108         197 -------KSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAA  269 (703)
Q Consensus       197 -------~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~  269 (703)
                             ....+|..-|+.+.||||+++++.++-+      ++|++||.++|+.+..+.+|-..|..++|+.|.+.|++|
T Consensus       354 ~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFD------kSVkLW~g~tGk~lasfRGHv~~VYqvawsaDsRLlVS~  427 (480)
T KOG0271|consen  354 FKSKKPITRMTGHQALVNHVSFSPDGRYIASASFD------KSVKLWDGRTGKFLASFRGHVAAVYQVAWSADSRLLVSG  427 (480)
T ss_pred             cccccchhhhhchhhheeeEEECCCccEEEEeecc------cceeeeeCCCcchhhhhhhccceeEEEEeccCccEEEEc
Confidence                   1234677889999999999999988876      489999999999999999999999999999999999999


Q ss_pred             eCCC-EEEEEcCCCceecc------eeeeEEEccchhhhHhhcCCcceEEEEEEe
Q psy7108         270 TTEG-VHIYSLDSGYVFDP------FLLDISITPQSVKEALADKDYAKALMMSLK  317 (703)
Q Consensus       270 s~Dg-v~iwd~~~~~~~~~------~~~~~~~spd~~~~~l~sg~~~~~l~la~~  317 (703)
                      +.|. +++|++.+.+....      .+..++|+|||  ..+++|..|+.+++ |+
T Consensus       428 SkDsTLKvw~V~tkKl~~DLpGh~DEVf~vDwspDG--~rV~sggkdkv~~l-w~  479 (480)
T KOG0271|consen  428 SKDSTLKVWDVRTKKLKQDLPGHADEVFAVDWSPDG--QRVASGGKDKVLRL-WR  479 (480)
T ss_pred             CCCceEEEEEeeeeeecccCCCCCceEEEEEecCCC--ceeecCCCceEEEe-ec
Confidence            9999 99999998876433      35789999999  78999999999988 64

>KOG0271|consensus

Probab=100.00  E-value=3.8e-33  Score=273.58  Aligned_cols=258  Identities=20%  Similarity=0.348  Sum_probs=220.8

Q ss_pred             CccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeE
Q psy7108          36 RVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQL  115 (703)
Q Consensus        36 ~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I  115 (703)
                      +|.  ..+.||.++|-|++|+|  +|..|+||+.|.++|+||+.+..+.....+|..-|.|++|+|||+.||+|+.||+|
T Consensus       106 rCs--sS~~GH~e~Vl~~~fsp--~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I  181 (480)
T KOG0271|consen  106 RCS--SSIAGHGEAVLSVQFSP--TGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSI  181 (480)
T ss_pred             eec--cccCCCCCcEEEEEecC--CCceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeE
Confidence            444  67889999999999999  99999999999999999999998888999999999999999999999999999999


Q ss_pred             EEEEcCCCcEE-EEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC-----CCCEEEEEecCCcEEEEECCCCceEE
Q psy7108         116 IMFDVESAAQV-GSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA-----DGSCILAAGQSKYICIYSSREGILLK  189 (703)
Q Consensus       116 ~vwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp-----dg~~l~s~s~dg~I~lwD~~~~~~~~  189 (703)
                      ++||..+|+++ ..+.+|+                    +.|++++|.|     ..+.|++++.||+|+|||+..++++.
T Consensus       182 ~lwdpktg~~~g~~l~gH~--------------------K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~  241 (480)
T KOG0271|consen  182 RLWDPKTGQQIGRALRGHK--------------------KWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVR  241 (480)
T ss_pred             EEecCCCCCcccccccCcc--------------------cceeEEeecccccCCCccceecccCCCCEEEEEccCceEEE
Confidence            99999998765 4556655                    4899999976     56889999999999999999998888


Q ss_pred             EEEeccC---------------------------------Cccccccccceeeeec-----------cCCCE--------
Q psy7108         190 KFTITQN---------------------------------KSLDGINDFINRRKMT-----------EFGNV--------  217 (703)
Q Consensus       190 ~~~~~~~---------------------------------~~~~~~~~~v~~~~~s-----------pdg~~--------  217 (703)
                      .+.+|..                                 ..+.+|..+|+.++.+           |.++.        
T Consensus       242 ~lsgHT~~VTCvrwGG~gliySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~  321 (480)
T KOG0271|consen  242 TLSGHTASVTCVRWGGEGLIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQ  321 (480)
T ss_pred             EeccCccceEEEEEcCCceEEecCCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHH
Confidence            7776654                                 2456788888888777           33333        


Q ss_pred             -----------------EEEEcccCCCCCeeEEECCCCCC-CccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEE
Q psy7108         218 -----------------SLIETRETHEGGNVVLKLPGVKK-GDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYS  278 (703)
Q Consensus       218 -----------------l~~~~~~~~~~~~~~i~iwd~~~-~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd  278 (703)
                                       ++.++.+      .++.+|+... .+++.+..+|..-|+.+.||||++++|+++-|. |++|+
T Consensus       322 ~~Al~rY~~~~~~~~erlVSgsDd------~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~  395 (480)
T KOG0271|consen  322 KKALERYEAVLKDSGERLVSGSDD------FTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWD  395 (480)
T ss_pred             HHHHHHHHHhhccCcceeEEecCC------ceEEEecccccccchhhhhchhhheeeEEECCCccEEEEeecccceeeee
Confidence                             4444433      4899997654 468888999999999999999999999999999 99999


Q ss_pred             cCCCceeccee------eeEEEccchhhhHhhcCCcceEEEEEEecCchhHHHH
Q psy7108         279 LDSGYVFDPFL------LDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIH  326 (703)
Q Consensus       279 ~~~~~~~~~~~------~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~~~~~~  326 (703)
                      ..+|+.+..+.      ..++|+.|.  +++.+|+.|.++++ |++...++...
T Consensus       396 g~tGk~lasfRGHv~~VYqvawsaDs--RLlVS~SkDsTLKv-w~V~tkKl~~D  446 (480)
T KOG0271|consen  396 GRTGKFLASFRGHVAAVYQVAWSADS--RLLVSGSKDSTLKV-WDVRTKKLKQD  446 (480)
T ss_pred             CCCcchhhhhhhccceeEEEEeccCc--cEEEEcCCCceEEE-EEeeeeeeccc
Confidence            99999877664      679999999  89999999999999 99887654443

>KOG0279|consensus

Probab=100.00  E-value=3.4e-32  Score=257.47  Aligned_cols=260  Identities=20%  Similarity=0.272  Sum_probs=218.1

Q ss_pred             CceEEecCCceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEE
Q psy7108          19 GNVVLKLPGVKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCV   97 (703)
Q Consensus        19 ~~~~i~~~~v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v   97 (703)
                      .+..+-+|+...-| ..|..+  +.++||...|..+..++  ||++.+|+|+|+++|+||+.+++..+++.+|...|.++
T Consensus        36 rDk~ii~W~L~~dd~~~G~~~--r~~~GHsH~v~dv~~s~--dg~~alS~swD~~lrlWDl~~g~~t~~f~GH~~dVlsv  111 (315)
T KOG0279|consen   36 RDKTIIVWKLTSDDIKYGVPV--RRLTGHSHFVSDVVLSS--DGNFALSASWDGTLRLWDLATGESTRRFVGHTKDVLSV  111 (315)
T ss_pred             cceEEEEEEeccCccccCcee--eeeeccceEecceEEcc--CCceEEeccccceEEEEEecCCcEEEEEEecCCceEEE
Confidence            34444455544334 567878  99999999999999999  99999999999999999999998889999999999999


Q ss_pred             EEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC--CCEEEEEecCC
Q psy7108          98 AYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD--GSCILAAGQSK  175 (703)
Q Consensus        98 ~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd--g~~l~s~s~dg  175 (703)
                      +|+||++.+++|+.|++|++|++-........+..                   +.+.|+|++|+|+  .-.|++++.|+
T Consensus       112 a~s~dn~qivSGSrDkTiklwnt~g~ck~t~~~~~-------------------~~~WVscvrfsP~~~~p~Ivs~s~Dk  172 (315)
T KOG0279|consen  112 AFSTDNRQIVSGSRDKTIKLWNTLGVCKYTIHEDS-------------------HREWVSCVRFSPNESNPIIVSASWDK  172 (315)
T ss_pred             EecCCCceeecCCCcceeeeeeecccEEEEEecCC-------------------CcCcEEEEEEcCCCCCcEEEEccCCc
Confidence            99999999999999999999998755443333322                   1238999999997  67899999999


Q ss_pred             cEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceE
Q psy7108         176 YICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVF  255 (703)
Q Consensus       176 ~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~  255 (703)
                      ++++||+++.+....+.+|.+        .++.+++||||...+.++.++      .+.+||++.++.++. ..|...|.
T Consensus       173 tvKvWnl~~~~l~~~~~gh~~--------~v~t~~vSpDGslcasGgkdg------~~~LwdL~~~k~lys-l~a~~~v~  237 (315)
T KOG0279|consen  173 TVKVWNLRNCQLRTTFIGHSG--------YVNTVTVSPDGSLCASGGKDG------EAMLWDLNEGKNLYS-LEAFDIVN  237 (315)
T ss_pred             eEEEEccCCcchhhccccccc--------cEEEEEECCCCCEEecCCCCc------eEEEEEccCCceeEe-ccCCCeEe
Confidence            999999999888777765544        999999999999888866553      899999999988654 45778899


Q ss_pred             EEEEcCCCCEEEEEeCCCEEEEEcCCCceeccee---------------eeEEEccchhhhHhhcCCcceEEEEEEecC
Q psy7108         256 CVKFSPTGQAWVAATTEGVHIYSLDSGYVFDPFL---------------LDISITPQSVKEALADKDYAKALMMSLKLN  319 (703)
Q Consensus       256 ~l~~spdg~~l~s~s~Dgv~iwd~~~~~~~~~~~---------------~~~~~spd~~~~~l~sg~~~~~l~la~~l~  319 (703)
                      +++|+|+.-+|+.+...+|+|||++++.++..+.               .+++|++||  ..|..|..++.+++ |.+.
T Consensus       238 sl~fspnrywL~~at~~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clslaws~dG--~tLf~g~td~~irv-~qv~  313 (315)
T KOG0279|consen  238 SLCFSPNRYWLCAATATSIKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWSADG--QTLFAGYTDNVIRV-WQVA  313 (315)
T ss_pred             eEEecCCceeEeeccCCceEEEeccchhhhhhccccccccccccCCcEEEEEEEcCCC--cEEEeeecCCcEEE-EEee
Confidence            9999999988888888889999999987755442               568999999  78889999999988 7653

>KOG0272|consensus

Probab=99.98  E-value=7.4e-32  Score=268.16  Aligned_cols=213  Identities=18%  Similarity=0.269  Sum_probs=194.8

Q ss_pred             ceeeccCC-CccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEE
Q psy7108          28 VKKGDMAA-RVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEI  106 (703)
Q Consensus        28 v~~~d~tg-~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~l  106 (703)
                      +++|+.++ .++  ..|+||...|..++|+|  +|++|+|+|.|.+-|+||+.++.+.....+|..+|.+++|.|||..+
T Consensus       243 vklw~~~~e~~l--~~l~gH~~RVs~VafHP--sG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~  318 (459)
T KOG0272|consen  243 VKLWKLSQETPL--QDLEGHLARVSRVAFHP--SGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLA  318 (459)
T ss_pred             eeeeccCCCcch--hhhhcchhhheeeeecC--CCceeeecccccchhhcccccchhhHhhcccccccceeEecCCCcee
Confidence            55666544 777  89999999999999999  99999999999999999999998888888999999999999999999


Q ss_pred             EEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCc
Q psy7108         107 VVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGI  186 (703)
Q Consensus       107 as~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~  186 (703)
                      ++|+.|..-+|||+++|+++..+.+|..                    +|.+++|+|+|..|++|+.|++++|||++...
T Consensus       319 ~tGGlD~~~RvWDlRtgr~im~L~gH~k--------------------~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~  378 (459)
T KOG0272|consen  319 ATGGLDSLGRVWDLRTGRCIMFLAGHIK--------------------EILSVAFSPNGYHLATGSSDNTCKVWDLRMRS  378 (459)
T ss_pred             eccCccchhheeecccCcEEEEeccccc--------------------ceeeEeECCCceEEeecCCCCcEEEeeecccc
Confidence            9999999999999999999999999875                    89999999999999999999999999999988


Q ss_pred             eEEEEEeccCCccccccccceeeeeccC-CCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCE
Q psy7108         187 LLKKFTITQNKSLDGINDFINRRKMTEF-GNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQA  265 (703)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~v~~~~~spd-g~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~  265 (703)
                      ++.++..|.+        -|+.+.|+|+ |.++++++.+      +++++|..++++++..+.+|++.|.+++.+||+.+
T Consensus       379 ~ly~ipAH~n--------lVS~Vk~~p~~g~fL~TasyD------~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~d~~~  444 (459)
T KOG0272|consen  379 ELYTIPAHSN--------LVSQVKYSPQEGYFLVTASYD------NTVKIWSTRTWSPLKSLAGHEGKVISLDISPDSQA  444 (459)
T ss_pred             cceecccccc--------hhhheEecccCCeEEEEcccC------cceeeecCCCcccchhhcCCccceEEEEeccCCce
Confidence            8877766655        8999999994 5555555544      58999999999999999999999999999999999


Q ss_pred             EEEEeCCC-EEEEE
Q psy7108         266 WVAATTEG-VHIYS  278 (703)
Q Consensus       266 l~s~s~Dg-v~iwd  278 (703)
                      +++++.|. +++|.
T Consensus       445 i~t~s~DRT~KLW~  458 (459)
T KOG0272|consen  445 IATSSFDRTIKLWR  458 (459)
T ss_pred             EEEeccCceeeecc
Confidence            99999999 99995

>KOG0286|consensus

Probab=99.97  E-value=2.2e-29  Score=239.72  Aligned_cols=240  Identities=17%  Similarity=0.245  Sum_probs=212.2

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEc
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDV  120 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~  120 (703)
                      ++|+||.+.|.++.|++  |.++|+|+|.||.+.|||..+..++..+.-...-|..++|+|.|+.+|+|+.|+...||++
T Consensus        49 r~LkGH~~Ki~~~~ws~--Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~l  126 (343)
T KOG0286|consen   49 RTLKGHLNKIYAMDWST--DSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSIYPL  126 (343)
T ss_pred             EEecccccceeeeEecC--CcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCceeEEEec
Confidence            78999999999999999  9999999999999999999988877777777888999999999999999999999999999


Q ss_pred             CCC------cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEec
Q psy7108         121 ESA------AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTIT  194 (703)
Q Consensus       121 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~  194 (703)
                      .+.      +..+.+.+|                    .+.+.|+.|-+|+ .|++++.|.++.+||+++++.+..|.+|
T Consensus       127 s~~d~~g~~~v~r~l~gH--------------------tgylScC~f~dD~-~ilT~SGD~TCalWDie~g~~~~~f~GH  185 (343)
T KOG0286|consen  127 STRDAEGNVRVSRELAGH--------------------TGYLSCCRFLDDN-HILTGSGDMTCALWDIETGQQTQVFHGH  185 (343)
T ss_pred             ccccccccceeeeeecCc--------------------cceeEEEEEcCCC-ceEecCCCceEEEEEcccceEEEEecCC
Confidence            865      233445554                    4589999998854 6899999999999999999999998866


Q ss_pred             cCCccccccccceeeeecc-CCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC
Q psy7108         195 QNKSLDGINDFINRRKMTE-FGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG  273 (703)
Q Consensus       195 ~~~~~~~~~~~v~~~~~sp-dg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg  273 (703)
                      .+        .|.++.++| +++.++.++.+      ...++||++.+.+++.+.+|+..|+++.|.|+|.-+++|++|+
T Consensus       186 ~g--------DV~slsl~p~~~ntFvSg~cD------~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~  251 (343)
T KOG0286|consen  186 TG--------DVMSLSLSPSDGNTFVSGGCD------KSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSDDA  251 (343)
T ss_pred             cc--------cEEEEecCCCCCCeEEecccc------cceeeeeccCcceeEeecccccccceEEEccCCCeeeecCCCc
Confidence            55        899999999 88888887776      4899999999999999999999999999999999999999999


Q ss_pred             -EEEEEcCCCceeccee--------eeEEEccchhhhHhhcCCcceEEEEEEecCc
Q psy7108         274 -VHIYSLDSGYVFDPFL--------LDISITPQSVKEALADKDYAKALMMSLKLNE  320 (703)
Q Consensus       274 -v~iwd~~~~~~~~~~~--------~~~~~spd~~~~~l~sg~~~~~l~la~~l~~  320 (703)
                       .++||++..+.+..+.        .+++||..|  ++|..|..+....+ |+.-.
T Consensus       252 tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SG--RlLfagy~d~~c~v-WDtlk  304 (343)
T KOG0286|consen  252 TCRLYDLRADQELAVYSHDSIICGITSVAFSKSG--RLLFAGYDDFTCNV-WDTLK  304 (343)
T ss_pred             eeEEEeecCCcEEeeeccCcccCCceeEEEcccc--cEEEeeecCCceeE-eeccc
Confidence             9999999988766653        579999999  88888888888777 76543

>KOG0263|consensus

Probab=99.97  E-value=4.2e-30  Score=274.60  Aligned_cols=206  Identities=17%  Similarity=0.286  Sum_probs=194.7

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEc
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDV  120 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~  120 (703)
                      +++.||.++|..++|+|  +.++|++||.|+++|+|.+.+..+.....+|..+|.++.|+|-|-++|+++.|++.++|..
T Consensus       445 ~~L~GH~GPVyg~sFsP--d~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~  522 (707)
T KOG0263|consen  445 RTLYGHSGPVYGCSFSP--DRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWST  522 (707)
T ss_pred             EEeecCCCceeeeeecc--cccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeeec
Confidence            67999999999999999  9999999999999999999999888888899999999999999999999999999999999


Q ss_pred             CCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccc
Q psy7108         121 ESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLD  200 (703)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~  200 (703)
                      +...+.+.+.+|-.                    .|.|+.|+|+..++++||.|.+|++||+.+|..++.|.+|..    
T Consensus       523 d~~~PlRifaghls--------------------DV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~----  578 (707)
T KOG0263|consen  523 DHNKPLRIFAGHLS--------------------DVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKG----  578 (707)
T ss_pred             ccCCchhhhccccc--------------------ccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCC----
Confidence            99999999988876                    799999999999999999999999999999999999976555    


Q ss_pred             cccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEc
Q psy7108         201 GINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSL  279 (703)
Q Consensus       201 ~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~  279 (703)
                          +|.+++|||+|+++++++.++      .|++||+.+++.+..+.+|.+.|.++.||.||..||+|+.|. |++||+
T Consensus       579 ----~V~al~~Sp~Gr~LaSg~ed~------~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~  648 (707)
T KOG0263|consen  579 ----PVTALAFSPCGRYLASGDEDG------LIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDL  648 (707)
T ss_pred             ----ceEEEEEcCCCceEeecccCC------cEEEEEcCCCcchhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEc
Confidence                999999999999999888764      899999999999999999999999999999999999999999 999998


Q ss_pred             CCC
Q psy7108         280 DSG  282 (703)
Q Consensus       280 ~~~  282 (703)
                      ..-
T Consensus       649 ~~~  651 (707)
T KOG0263|consen  649 TKV  651 (707)
T ss_pred             hhh
Confidence            643

>KOG0279|consensus

Probab=99.97  E-value=7.8e-29  Score=234.74  Aligned_cols=249  Identities=16%  Similarity=0.241  Sum_probs=209.5

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCC-----ceeEEEecCCCcEEEEEEecCCCEEEEEECCCeE
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVET-----DTQHETIQLLSDALCVAYKPDGTEIVVATLDGQL  115 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~-----~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I  115 (703)
                      .++.+|++.|+.++..+. +.+.+++++.|.++.+|++...     ..++.+.+|...|..++.++||++.++++.|+++
T Consensus         9 ~tl~gh~d~Vt~la~~~~-~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~l   87 (315)
T KOG0279|consen    9 GTLEGHTDWVTALAIKIK-NSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDGTL   87 (315)
T ss_pred             eeecCCCceEEEEEeecC-CCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccccceE
Confidence            688999999999999994 5789999999999999998643     3467778899999999999999999999999999


Q ss_pred             EEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEecc
Q psy7108         116 IMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQ  195 (703)
Q Consensus       116 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~  195 (703)
                      ++||+.+++..+.|.+|..                    .|.+++|+||.+.+++|+.|++|++|++... +..+.....
T Consensus        88 rlWDl~~g~~t~~f~GH~~--------------------dVlsva~s~dn~qivSGSrDkTiklwnt~g~-ck~t~~~~~  146 (315)
T KOG0279|consen   88 RLWDLATGESTRRFVGHTK--------------------DVLSVAFSTDNRQIVSGSRDKTIKLWNTLGV-CKYTIHEDS  146 (315)
T ss_pred             EEEEecCCcEEEEEEecCC--------------------ceEEEEecCCCceeecCCCcceeeeeeeccc-EEEEEecCC
Confidence            9999999999999999876                    8999999999999999999999999998854 444443221


Q ss_pred             CCccccccccceeeeeccCC--CEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC
Q psy7108         196 NKSLDGINDFINRRKMTEFG--NVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG  273 (703)
Q Consensus       196 ~~~~~~~~~~v~~~~~spdg--~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg  273 (703)
                            +.++|.++.|+|..  ..++.++.+      ++|++||+++.+....+.+|.+.++.+++||||...++|+.||
T Consensus       147 ------~~~WVscvrfsP~~~~p~Ivs~s~D------ktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg  214 (315)
T KOG0279|consen  147 ------HREWVSCVRFSPNESNPIIVSASWD------KTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDG  214 (315)
T ss_pred             ------CcCcEEEEEEcCCCCCcEEEEccCC------ceEEEEccCCcchhhccccccccEEEEEECCCCCEEecCCCCc
Confidence                  24699999999994  444444443      5999999999999999999999999999999999999999999


Q ss_pred             -EEEEEcCCCceecce-----eeeEEEccchhhhHhhcCCcceEEEEEEecCchhHHHHH
Q psy7108         274 -VHIYSLDSGYVFDPF-----LLDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIHV  327 (703)
Q Consensus       274 -v~iwd~~~~~~~~~~-----~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~~~~~~v  327 (703)
                       +.+||++.++.+..+     +.+++|+|.......+++   ..+++ |++.....+.++
T Consensus       215 ~~~LwdL~~~k~lysl~a~~~v~sl~fspnrywL~~at~---~sIkI-wdl~~~~~v~~l  270 (315)
T KOG0279|consen  215 EAMLWDLNEGKNLYSLEAFDIVNSLCFSPNRYWLCAATA---TSIKI-WDLESKAVVEEL  270 (315)
T ss_pred             eEEEEEccCCceeEeccCCCeEeeEEecCCceeEeeccC---CceEE-Eeccchhhhhhc
Confidence             999999999886554     467999999844333333   33777 998877655554

>KOG0315|consensus

Probab=99.96  E-value=2.6e-28  Score=227.33  Aligned_cols=266  Identities=12%  Similarity=0.164  Sum_probs=224.9

Q ss_pred             EeeecccCCceEEecCCceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCce--eEEEe
Q psy7108          11 ETRETHEGGNVVLKLPGVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDT--QHETI   88 (703)
Q Consensus        11 ~~~~~~~~~~~~i~~~~v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~--~~~~~   88 (703)
                      .++....|-+..|++|...    +|.|.  +++.-..+.|+.+...|  ++..||+++. -.||+||+.+++.  +..+.
T Consensus        10 ~viLvsA~YDhTIRfWqa~----tG~C~--rTiqh~dsqVNrLeiTp--dk~~LAaa~~-qhvRlyD~~S~np~Pv~t~e   80 (311)
T KOG0315|consen   10 PVILVSAGYDHTIRFWQAL----TGICS--RTIQHPDSQVNRLEITP--DKKDLAAAGN-QHVRLYDLNSNNPNPVATFE   80 (311)
T ss_pred             ceEEEeccCcceeeeeehh----cCeEE--EEEecCccceeeEEEcC--CcchhhhccC-CeeEEEEccCCCCCceeEEe
Confidence            4556667777889999777    99999  99998889999999999  9999999987 4799999987764  56666


Q ss_pred             cCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEE
Q psy7108          89 QLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCI  168 (703)
Q Consensus        89 ~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l  168 (703)
                      .|...|+++.|..||+.+++|+.||+++|||++.....+.++..                     .+|+++..+|+...|
T Consensus        81 ~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~~~---------------------spVn~vvlhpnQteL  139 (311)
T KOG0315|consen   81 GHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQHN---------------------SPVNTVVLHPNQTEL  139 (311)
T ss_pred             ccCCceEEEEEeecCeEEEecCCCceEEEEeccCcccchhccCC---------------------CCcceEEecCCcceE
Confidence            79999999999999999999999999999999986665555443                     389999999999999


Q ss_pred             EEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC------c
Q psy7108         169 LAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG------D  242 (703)
Q Consensus       169 ~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~------~  242 (703)
                      ++|..+|.|++||+.+..+...+.....       .++.++.+.|||+.++.....|      ..++|++-+.      +
T Consensus       140 is~dqsg~irvWDl~~~~c~~~liPe~~-------~~i~sl~v~~dgsml~a~nnkG------~cyvW~l~~~~~~s~l~  206 (311)
T KOG0315|consen  140 ISGDQSGNIRVWDLGENSCTHELIPEDD-------TSIQSLTVMPDGSMLAAANNKG------NCYVWRLLNHQTASELE  206 (311)
T ss_pred             EeecCCCcEEEEEccCCccccccCCCCC-------cceeeEEEcCCCcEEEEecCCc------cEEEEEccCCCccccce
Confidence            9999999999999998877665543222       4889999999999999887764      7899987665      3


Q ss_pred             cceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCc-------eecceeeeEEEccchhhhHhhcCCcceEEEE
Q psy7108         243 MAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGY-------VFDPFLLDISITPQSVKEALADKDYAKALMM  314 (703)
Q Consensus       243 ~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~-------~~~~~~~~~~~spd~~~~~l~sg~~~~~l~l  314 (703)
                      ++.++..|++.+..+.+|||+++||++|.|. ++||+.++--       ..+....+.+||.|+  .+|.+++.|...++
T Consensus       207 P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg--~YlvTassd~~~rl  284 (311)
T KOG0315|consen  207 PVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDFFKLELVLTGHQRWVWDCAFSADG--EYLVTASSDHTARL  284 (311)
T ss_pred             EhhheecccceEEEEEECCCCcEEEeecCCceEEEEecCCceeeEEEeecCCceEEeeeeccCc--cEEEecCCCCceee
Confidence            4566778999999999999999999999999 9999988761       134456889999999  99999999999998


Q ss_pred             EEecCchh
Q psy7108         315 SLKLNEQG  322 (703)
Q Consensus       315 a~~l~~~~  322 (703)
                       |++...+
T Consensus       285 -W~~~~~k  291 (311)
T KOG0315|consen  285 -WDLSAGK  291 (311)
T ss_pred             -cccccCc
Confidence             9887543

>KOG0263|consensus

Probab=99.96  E-value=1.1e-28  Score=263.79  Aligned_cols=241  Identities=15%  Similarity=0.254  Sum_probs=215.2

Q ss_pred             cccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCC-------------------------------ceeEEEecC
Q psy7108          42 VLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVET-------------------------------DTQHETIQL   90 (703)
Q Consensus        42 ~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~-------------------------------~~~~~~~~~   90 (703)
                      ++..-...++|..|++  |+.+||.|-.|..|++|.+...                               .......+|
T Consensus       373 T~~nt~~~v~ca~fSd--dssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH  450 (707)
T KOG0263|consen  373 TFHNTYQGVTCAEFSD--DSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGH  450 (707)
T ss_pred             EEEEcCCcceeEeecC--CcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecC
Confidence            3334457799999999  9999999999999999998631                               123446789


Q ss_pred             CCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEE
Q psy7108          91 LSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILA  170 (703)
Q Consensus        91 ~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s  170 (703)
                      .++|..+.|+|+.++|++++.|+++++|.+++...+..+.+|..                    +|+++.|+|-|-++|+
T Consensus       451 ~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~--------------------PVwdV~F~P~GyYFat  510 (707)
T KOG0263|consen  451 SGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLA--------------------PVWDVQFAPRGYYFAT  510 (707)
T ss_pred             CCceeeeeecccccceeeccCCcceeeeecccceeEEEecCCCc--------------------ceeeEEecCCceEEEe
Confidence            99999999999999999999999999999999999999998876                    9999999999999999


Q ss_pred             EecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCC
Q psy7108         171 AGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKP  250 (703)
Q Consensus       171 ~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h  250 (703)
                      ++.|++-++|......+.+.+.+|-        +.|.|+.|+|++.++++++.+      +++++||+.+|..++.+.+|
T Consensus       511 as~D~tArLWs~d~~~PlRifaghl--------sDV~cv~FHPNs~Y~aTGSsD------~tVRlWDv~~G~~VRiF~GH  576 (707)
T KOG0263|consen  511 ASHDQTARLWSTDHNKPLRIFAGHL--------SDVDCVSFHPNSNYVATGSSD------RTVRLWDVSTGNSVRIFTGH  576 (707)
T ss_pred             cCCCceeeeeecccCCchhhhcccc--------cccceEEECCcccccccCCCC------ceEEEEEcCCCcEEEEecCC
Confidence            9999999999999888888776554        489999999999999988665      69999999999999999999


Q ss_pred             ccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecce------eeeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108         251 EVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPF------LLDISITPQSVKEALADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       251 ~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~  321 (703)
                      .++|.+++|||+|++|++|+.|+ |++||+.++..+..+      ..++.|+.+|  ..|++++.|..+++ |++...
T Consensus       577 ~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg--~vLasgg~DnsV~l-WD~~~~  651 (707)
T KOG0263|consen  577 KGPVTALAFSPCGRYLASGDEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDG--NVLASGGADNSVRL-WDLTKV  651 (707)
T ss_pred             CCceEEEEEcCCCceEeecccCCcEEEEEcCCCcchhhhhcccCceeEEEEecCC--CEEEecCCCCeEEE-EEchhh
Confidence            99999999999999999999999 999999998875544      4679999999  99999999999999 987654

>KOG0286|consensus

Probab=99.96  E-value=6e-28  Score=229.98  Aligned_cols=229  Identities=20%  Similarity=0.290  Sum_probs=200.8

Q ss_pred             cccCCceEEecCCceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcE
Q psy7108          15 THEGGNVVLKLPGVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDA   94 (703)
Q Consensus        15 ~~~~~~~~i~~~~v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V   94 (703)
                      +..|-+....+.++..-|..|.....+.+.||++-+.|+.|-+   ...|+|+|.|.+.-+||+++++....+.+|.+.|
T Consensus       113 AcGGLdN~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~d---D~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV  189 (343)
T KOG0286|consen  113 ACGGLDNKCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLD---DNHILTGSGDMTCALWDIETGQQTQVFHGHTGDV  189 (343)
T ss_pred             EecCcCceeEEEecccccccccceeeeeecCccceeEEEEEcC---CCceEecCCCceEEEEEcccceEEEEecCCcccE
Confidence            3444444455555554444554433488999999999999985   5678999999999999999999999999999999


Q ss_pred             EEEEEec-CCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec
Q psy7108          95 LCVAYKP-DGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ  173 (703)
Q Consensus        95 ~~v~~sp-dg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~  173 (703)
                      .+++++| +++.+++|+.|+..++||++.+..+++|.+|..                    -|++++|.|+|.-+++|+.
T Consensus       190 ~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghes--------------------DINsv~ffP~G~afatGSD  249 (343)
T KOG0286|consen  190 MSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHES--------------------DINSVRFFPSGDAFATGSD  249 (343)
T ss_pred             EEEecCCCCCCeEEecccccceeeeeccCcceeEeeccccc--------------------ccceEEEccCCCeeeecCC
Confidence            9999999 999999999999999999999999999999876                    8999999999999999999


Q ss_pred             CCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccc
Q psy7108         174 SKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVR  253 (703)
Q Consensus       174 dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~  253 (703)
                      |+++++||++..+.+..+...      .....|++++||..|++++++..+      ..+.+||.-.++.+..+.+|+.+
T Consensus       250 D~tcRlyDlRaD~~~a~ys~~------~~~~gitSv~FS~SGRlLfagy~d------~~c~vWDtlk~e~vg~L~GHeNR  317 (343)
T KOG0286|consen  250 DATCRLYDLRADQELAVYSHD------SIICGITSVAFSKSGRLLFAGYDD------FTCNVWDTLKGERVGVLAGHENR  317 (343)
T ss_pred             CceeEEEeecCCcEEeeeccC------cccCCceeEEEcccccEEEeeecC------CceeEeeccccceEEEeeccCCe
Confidence            999999999999888888622      234589999999999999987654      47999999999999999999999


Q ss_pred             eEEEEEcCCCCEEEEEeCCC-EEEEE
Q psy7108         254 VFCVKFSPTGQAWVAATTEG-VHIYS  278 (703)
Q Consensus       254 V~~l~~spdg~~l~s~s~Dg-v~iwd  278 (703)
                      |.++..+|||..+++|+.|. ++||.
T Consensus       318 vScl~~s~DG~av~TgSWDs~lriW~  343 (343)
T KOG0286|consen  318 VSCLGVSPDGMAVATGSWDSTLRIWA  343 (343)
T ss_pred             eEEEEECCCCcEEEecchhHheeecC
Confidence            99999999999999999999 99994

>KOG0315|consensus

Probab=99.96  E-value=8.3e-28  Score=224.00  Aligned_cols=231  Identities=17%  Similarity=0.228  Sum_probs=192.5

Q ss_pred             ceeecc-CCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEE
Q psy7108          28 VKKGDM-AARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEI  106 (703)
Q Consensus        28 v~~~d~-tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~l  106 (703)
                      |+++|. +++..+..++.+|++.|+++.|..  +|++++|||.||++||||++.. .+.+.+.|.++|+++..+|+...|
T Consensus        63 vRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~--dgrWMyTgseDgt~kIWdlR~~-~~qR~~~~~spVn~vvlhpnQteL  139 (311)
T KOG0315|consen   63 VRLYDLNSNNPNPVATFEGHTKNVTAVGFQC--DGRWMYTGSEDGTVKIWDLRSL-SCQRNYQHNSPVNTVVLHPNQTEL  139 (311)
T ss_pred             eEEEEccCCCCCceeEEeccCCceEEEEEee--cCeEEEecCCCceEEEEeccCc-ccchhccCCCCcceEEecCCcceE
Confidence            555552 333322289999999999999999  9999999999999999999885 456677888999999999999999


Q ss_pred             EEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCc
Q psy7108         107 VVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGI  186 (703)
Q Consensus       107 as~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~  186 (703)
                      ++|..+|.|++||+.+......+-...+                   ..|.+++..|||++++.+...|.+++|++-+..
T Consensus       140 is~dqsg~irvWDl~~~~c~~~liPe~~-------------------~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~  200 (311)
T KOG0315|consen  140 ISGDQSGNIRVWDLGENSCTHELIPEDD-------------------TSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQ  200 (311)
T ss_pred             EeecCCCcEEEEEccCCccccccCCCCC-------------------cceeeEEEcCCCcEEEEecCCccEEEEEccCCC
Confidence            9999999999999988766555443332                   279999999999999999999999999998754


Q ss_pred             eEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC-ccceeecCCccceEEEEEcCCCCE
Q psy7108         187 LLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG-DMAARVLKPEVRVFCVKFSPTGQA  265 (703)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~-~~~~~~~~h~~~V~~l~~spdg~~  265 (703)
                      ....+..-.  .++.|+..+..+.+|||++++++++++      .+++||+.++. +....+.+|+..++.++||.||++
T Consensus       201 ~~s~l~P~~--k~~ah~~~il~C~lSPd~k~lat~ssd------ktv~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~Y  272 (311)
T KOG0315|consen  201 TASELEPVH--KFQAHNGHILRCLLSPDVKYLATCSSD------KTVKIWNTDDFFKLELVLTGHQRWVWDCAFSADGEY  272 (311)
T ss_pred             ccccceEhh--heecccceEEEEEECCCCcEEEeecCC------ceEEEEecCCceeeEEEeecCCceEEeeeeccCccE
Confidence            433333221  245666799999999999999998876      59999998877 556677899999999999999999


Q ss_pred             EEEEeCCC-EEEEEcCCCceecce
Q psy7108         266 WVAATTEG-VHIYSLDSGYVFDPF  288 (703)
Q Consensus       266 l~s~s~Dg-v~iwd~~~~~~~~~~  288 (703)
                      |++|+.|+ +++|++..++....+
T Consensus       273 lvTassd~~~rlW~~~~~k~v~qy  296 (311)
T KOG0315|consen  273 LVTASSDHTARLWDLSAGKEVRQY  296 (311)
T ss_pred             EEecCCCCceeecccccCceeeec
Confidence            99999999 999999999876544

>KOG0285|consensus

Probab=99.96  E-value=1.7e-28  Score=239.15  Aligned_cols=254  Identities=13%  Similarity=0.199  Sum_probs=226.6

Q ss_pred             eeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEE
Q psy7108          30 KGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVA  109 (703)
Q Consensus        30 ~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~  109 (703)
                      .|....++.  +++.||.+.|.|+++.|  .+.+++||+.|++++|||+.+++....+.+|...|..+++|+-..+++++
T Consensus       136 eWHapwKl~--rVi~gHlgWVr~vavdP--~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~  211 (460)
T KOG0285|consen  136 EWHAPWKLY--RVISGHLGWVRSVAVDP--GNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSA  211 (460)
T ss_pred             cccCcceeh--hhhhhccceEEEEeeCC--CceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEe
Confidence            366667777  99999999999999999  89999999999999999999997777778899999999999999999999


Q ss_pred             ECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEE
Q psy7108         110 TLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLK  189 (703)
Q Consensus       110 s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~  189 (703)
                      +.|+.|+.||++..+.++.+.+|-.                    .|.|++.+|.-..|++|++|.++++||+++...+.
T Consensus       212 gedk~VKCwDLe~nkvIR~YhGHlS--------------------~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~  271 (460)
T KOG0285|consen  212 GEDKQVKCWDLEYNKVIRHYHGHLS--------------------GVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVH  271 (460)
T ss_pred             cCCCeeEEEechhhhhHHHhccccc--------------------eeEEEeccccceeEEecCCcceEEEeeecccceEE
Confidence            9999999999999999999988876                    89999999999999999999999999999999998


Q ss_pred             EEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEE
Q psy7108         190 KFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAA  269 (703)
Q Consensus       190 ~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~  269 (703)
                      .+.+|.+        .|.++.+.|....+++++.++      +|++||++.|+....+..|...|.+++.+|....+|++
T Consensus       272 ~l~GH~~--------~V~~V~~~~~dpqvit~S~D~------tvrlWDl~agkt~~tlt~hkksvral~lhP~e~~fASa  337 (460)
T KOG0285|consen  272 VLSGHTN--------PVASVMCQPTDPQVITGSHDS------TVRLWDLRAGKTMITLTHHKKSVRALCLHPKENLFASA  337 (460)
T ss_pred             EecCCCC--------cceeEEeecCCCceEEecCCc------eEEEeeeccCceeEeeecccceeeEEecCCchhhhhcc
Confidence            8887666        899999999888888888764      99999999999999999999999999999999999999


Q ss_pred             eCCCEEEEEcCCCceecc------eeeeEEEccchhhhHhhcCCcceEEEEEEecCchhHHH
Q psy7108         270 TTEGVHIYSLDSGYVFDP------FLLDISITPQSVKEALADKDYAKALMMSLKLNEQGLII  325 (703)
Q Consensus       270 s~Dgv~iwd~~~~~~~~~------~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~~~~~  325 (703)
                      +.|.++-|++..|.....      ....++...|+   ++.+|+..+.+.+ |+.......+
T Consensus       338 s~dnik~w~~p~g~f~~nlsgh~~iintl~~nsD~---v~~~G~dng~~~f-wdwksg~nyQ  395 (460)
T KOG0285|consen  338 SPDNIKQWKLPEGEFLQNLSGHNAIINTLSVNSDG---VLVSGGDNGSIMF-WDWKSGHNYQ  395 (460)
T ss_pred             CCccceeccCCccchhhccccccceeeeeeeccCc---eEEEcCCceEEEE-EecCcCcccc
Confidence            999999999999887666      44667777787   5667777777777 7776544333

>KOG0273|consensus

Probab=99.96  E-value=1.1e-27  Score=241.52  Aligned_cols=259  Identities=18%  Similarity=0.291  Sum_probs=219.0

Q ss_pred             cccCCceEEecCC--ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCC
Q psy7108          15 THEGGNVVLKLPG--VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLS   92 (703)
Q Consensus        15 ~~~~~~~~i~~~~--v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~   92 (703)
                      .++|...+....+  +++|+.+|.++  .+|..|++||.++.|+.  +|++|++++.||++.+||..++.....+.-|..
T Consensus       244 n~~G~~LatG~~~G~~riw~~~G~l~--~tl~~HkgPI~slKWnk--~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~  319 (524)
T KOG0273|consen  244 NNDGTLLATGSEDGEARIWNKDGNLI--STLGQHKGPIFSLKWNK--KGTYILSGGVDGTTILWDAHTGTVKQQFEFHSA  319 (524)
T ss_pred             cCCCCeEEEeecCcEEEEEecCchhh--hhhhccCCceEEEEEcC--CCCEEEeccCCccEEEEeccCceEEEeeeeccC
Confidence            3556666666555  88899999999  99999999999999999  999999999999999999988865555555777


Q ss_pred             cEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe
Q psy7108          93 DALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG  172 (703)
Q Consensus        93 ~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s  172 (703)
                      +..+|.|-.+ ..+++++.|+.|+|+.+....++.++.+|..                    .|.++.|+|.|.+|++++
T Consensus       320 ~~lDVdW~~~-~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g--------------------~V~alk~n~tg~LLaS~S  378 (524)
T KOG0273|consen  320 PALDVDWQSN-DEFATSSTDGCIHVCKVGEDRPVKTFIGHHG--------------------EVNALKWNPTGSLLASCS  378 (524)
T ss_pred             CccceEEecC-ceEeecCCCceEEEEEecCCCcceeeecccC--------------------ceEEEEECCCCceEEEec
Confidence            7688999754 5689999999999999999999999999876                    899999999999999999


Q ss_pred             cCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCC---------EEEEEcccCCCCCeeEEECCCCCCCcc
Q psy7108         173 QSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGN---------VSLIETRETHEGGNVVLKLPGVKKGDM  243 (703)
Q Consensus       173 ~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~---------~l~~~~~~~~~~~~~~i~iwd~~~~~~  243 (703)
                      .|++++||......+...+..|..        .|..+.|+|+|.         .++.++.+      .+|++||+..+.+
T Consensus       379 dD~TlkiWs~~~~~~~~~l~~Hsk--------ei~t~~wsp~g~v~~n~~~~~~l~sas~d------stV~lwdv~~gv~  444 (524)
T KOG0273|consen  379 DDGTLKIWSMGQSNSVHDLQAHSK--------EIYTIKWSPTGPVTSNPNMNLMLASASFD------STVKLWDVESGVP  444 (524)
T ss_pred             CCCeeEeeecCCCcchhhhhhhcc--------ceeeEeecCCCCccCCCcCCceEEEeecC------CeEEEEEccCCce
Confidence            999999999988877776665544        777888888664         34444444      4999999999999


Q ss_pred             ceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceeccee-----eeEEEccchhhhHhhcCCcceEEEE
Q psy7108         244 AARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPFL-----LDISITPQSVKEALADKDYAKALMM  314 (703)
Q Consensus       244 ~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~~-----~~~~~spd~~~~~l~sg~~~~~l~l  314 (703)
                      +..+..|..+|.+++|||+|+++|+|+.|| |.+|+.++++.+..+.     ..++|+.+|  ..+..+..++.+.+
T Consensus       445 i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~~~~l~~s~~~~~~Ifel~Wn~~G--~kl~~~~sd~~vcv  519 (524)
T KOG0273|consen  445 IHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTKTGKLVKSYQGTGGIFELCWNAAG--DKLGACASDGSVCV  519 (524)
T ss_pred             eEeeccCCCceEEEEecCCCcEEEecCCCCeeEeccccchheeEeecCCCeEEEEEEcCCC--CEEEEEecCCCceE
Confidence            999999999999999999999999999999 9999999999987764     568888888  55555555555444

>KOG0284|consensus

Probab=99.96  E-value=3.8e-29  Score=247.70  Aligned_cols=241  Identities=15%  Similarity=0.229  Sum_probs=211.2

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCC-CcEEEEEEecCCCEEEEEECCCeEEEEE
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLL-SDALCVAYKPDGTEIVVATLDGQLIMFD  119 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~-~~V~~v~~spdg~~las~s~dg~I~vwd  119 (703)
                      .++..|..+|+++.|++  ++.+++||+.+|.|++|+..-. .+.....|. ..|++++|+|+...+++|+.||+|+|||
T Consensus       132 tilQaHDs~Vr~m~ws~--~g~wmiSgD~gG~iKyWqpnmn-nVk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWd  208 (464)
T KOG0284|consen  132 TILQAHDSPVRTMKWSH--NGTWMISGDKGGMIKYWQPNMN-NVKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWD  208 (464)
T ss_pred             HHhhhhcccceeEEEcc--CCCEEEEcCCCceEEecccchh-hhHHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEe
Confidence            35679999999999999  9999999999999999997544 455555544 8999999999999999999999999999


Q ss_pred             cCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCcc
Q psy7108         120 VESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSL  199 (703)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~  199 (703)
                      ....+....+.+|.-                    .|.+++|+|.-..|+++|.|+.|++||.+++.|+.++..|.+   
T Consensus       209 f~~~kee~vL~GHgw--------------------dVksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tlh~HKn---  265 (464)
T KOG0284|consen  209 FRMPKEERVLRGHGW--------------------DVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATLHGHKN---  265 (464)
T ss_pred             ccCCchhheeccCCC--------------------CcceeccCCccceeEEccCCceeEeecCCCcchhhhhhhccc---
Confidence            998888888877754                    799999999999999999999999999999999988876666   


Q ss_pred             ccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCC-CEEEEEeCCC-EEEE
Q psy7108         200 DGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTG-QAWVAATTEG-VHIY  277 (703)
Q Consensus       200 ~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg-~~l~s~s~Dg-v~iw  277 (703)
                           .|..+.|++++.++++++.+      ..++++|+++.+.+..+.+|...|+++.|+|-. ..|.+|+.|| |..|
T Consensus       266 -----tVl~~~f~~n~N~Llt~skD------~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~  334 (464)
T KOG0284|consen  266 -----TVLAVKFNPNGNWLLTGSKD------QSCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHW  334 (464)
T ss_pred             -----eEEEEEEcCCCCeeEEccCC------ceEEEEehhHhHHHHHhhcchhhheeeccccccccceeeccCCCceEEE
Confidence                 89999999999999988776      489999999888899999999999999999954 5678999999 9999


Q ss_pred             EcCCCce-------ecceeeeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108         278 SLDSGYV-------FDPFLLDISITPQSVKEALADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       278 d~~~~~~-------~~~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~  321 (703)
                      .+...+.       ++..+.+++++|-|  .+|++|+.|.++++ |.-+.|
T Consensus       335 ~v~~~~p~~~i~~AHd~~iwsl~~hPlG--hil~tgsnd~t~rf-w~r~rp  382 (464)
T KOG0284|consen  335 VVGLEEPLGEIPPAHDGEIWSLAYHPLG--HILATGSNDRTVRF-WTRNRP  382 (464)
T ss_pred             eccccccccCCCcccccceeeeeccccc--eeEeecCCCcceee-eccCCC
Confidence            9874444       33345889999999  89999999999999 876654

>KOG0295|consensus

Probab=99.96  E-value=2.5e-28  Score=238.91  Aligned_cols=249  Identities=16%  Similarity=0.207  Sum_probs=217.1

Q ss_pred             ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCC-CceeEEEecCCCcEEEEEEecCCCE
Q psy7108          28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVE-TDTQHETIQLLSDALCVAYKPDGTE  105 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~-~~~~~~~~~~~~~V~~v~~spdg~~  105 (703)
                      ++.|| .+|++.  +.|+||++.|.+++|+.  .|.+|++||.|-.+++||.++ .++++...+|...|.+++|-|.|.+
T Consensus       132 ikv~D~~tg~~e--~~LrGHt~sv~di~~~a--~Gk~l~tcSsDl~~~LWd~~~~~~c~ks~~gh~h~vS~V~f~P~gd~  207 (406)
T KOG0295|consen  132 IKVFDTETGELE--RSLRGHTDSVFDISFDA--SGKYLATCSSDLSAKLWDFDTFFRCIKSLIGHEHGVSSVFFLPLGDH  207 (406)
T ss_pred             EEEEEccchhhh--hhhhccccceeEEEEec--CccEEEecCCccchhheeHHHHHHHHHHhcCcccceeeEEEEecCCe
Confidence            55666 589998  99999999999999999  999999999998899999976 3456777889999999999999999


Q ss_pred             EEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCC
Q psy7108         106 IVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREG  185 (703)
Q Consensus       106 las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~  185 (703)
                      |++++.|.+|+.|++.++-++.++.+|.+                    .|..+..+.||..+++++.|.++++|-+.++
T Consensus       208 ilS~srD~tik~We~~tg~cv~t~~~h~e--------------------wvr~v~v~~DGti~As~s~dqtl~vW~~~t~  267 (406)
T KOG0295|consen  208 ILSCSRDNTIKAWECDTGYCVKTFPGHSE--------------------WVRMVRVNQDGTIIASCSNDQTLRVWVVATK  267 (406)
T ss_pred             eeecccccceeEEecccceeEEeccCchH--------------------hEEEEEecCCeeEEEecCCCceEEEEEeccc
Confidence            99999999999999999999999999876                    7999999999999999999999999999999


Q ss_pred             ceEEEEEeccCCccccccccceeeeeccCCC---------------EEEEEcccCCCCCeeEEECCCCCCCccceeecCC
Q psy7108         186 ILLKKFTITQNKSLDGINDFINRRKMTEFGN---------------VSLIETRETHEGGNVVLKLPGVKKGDMAARVLKP  250 (703)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~---------------~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h  250 (703)
                      ++...+..|..        +|.+++|.|...               ++..++.      +++|++||+.++.++.++.+|
T Consensus       268 ~~k~~lR~hEh--------~vEci~wap~~~~~~i~~at~~~~~~~~l~s~Sr------DktIk~wdv~tg~cL~tL~gh  333 (406)
T KOG0295|consen  268 QCKAELREHEH--------PVECIAWAPESSYPSISEATGSTNGGQVLGSGSR------DKTIKIWDVSTGMCLFTLVGH  333 (406)
T ss_pred             hhhhhhhcccc--------ceEEEEecccccCcchhhccCCCCCccEEEeecc------cceEEEEeccCCeEEEEEecc
Confidence            88777665544        777777776432               3333333      369999999999999999999


Q ss_pred             ccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCcee------cceeeeEEEccchhhhHhhcCCcceEEEEEEe
Q psy7108         251 EVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVF------DPFLLDISITPQSVKEALADKDYAKALMMSLK  317 (703)
Q Consensus       251 ~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~------~~~~~~~~~spd~~~~~l~sg~~~~~l~la~~  317 (703)
                      ...|.+++|+|.|++|+++.+|+ +++||+.++++.      +.++.+++|..+.  .++.+|+-+.++++ |.
T Consensus       334 dnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~lDfh~~~--p~VvTGsVdqt~Kv-wE  404 (406)
T KOG0295|consen  334 DNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHFVTSLDFHKTA--PYVVTGSVDQTVKV-WE  404 (406)
T ss_pred             cceeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccCCCcceeEEEecCCCC--ceEEeccccceeee-ee
Confidence            99999999999999999999999 999999998874      3455778888777  68889999888877 54

>KOG0266|consensus

Probab=99.95  E-value=2.5e-26  Score=252.20  Aligned_cols=273  Identities=21%  Similarity=0.326  Sum_probs=222.1

Q ss_pred             eeeEEeeecccCCceEEecCC--ceeecc-CCC--ccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcC-C
Q psy7108           7 VSLIETRETHEGGNVVLKLPG--VKKGDM-AAR--VLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAV-E   80 (703)
Q Consensus         7 ~~~~~~~~~~~~~~~~i~~~~--v~~~d~-tg~--~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~-~   80 (703)
                      .++....|.+.|.......++  ++.|+. +++  ++  +.+.+|...|++++|+|  ++.++++|+.|++++|||+. .
T Consensus       160 ~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~--~~l~~h~~~v~~~~fs~--d~~~l~s~s~D~tiriwd~~~~  235 (456)
T KOG0266|consen  160 PSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLL--RELSGHTRGVSDVAFSP--DGSYLLSGSDDKTLRIWDLKDD  235 (456)
T ss_pred             CceEEEEEcCCCCeEEEccCCCcEEEeecccccchhh--ccccccccceeeeEECC--CCcEEEEecCCceEEEeeccCC
Confidence            344455666666664444333  445553 444  56  78899999999999999  99999999999999999994 4


Q ss_pred             CceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEE
Q psy7108          81 TDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVC  160 (703)
Q Consensus        81 ~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~  160 (703)
                      +.....+.+|...|++++|+|+|+.+++|+.|++|++||++++++...+.+|.+                    .|++++
T Consensus       236 ~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~--------------------~is~~~  295 (456)
T KOG0266|consen  236 GRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSD--------------------GISGLA  295 (456)
T ss_pred             CeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCC--------------------ceEEEE
Confidence            456677789999999999999999999999999999999999999999999876                    899999


Q ss_pred             EcCCCCEEEEEecCCcEEEEECCCCc--eEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCC
Q psy7108         161 YSADGSCILAAGQSKYICIYSSREGI--LLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGV  238 (703)
Q Consensus       161 ~spdg~~l~s~s~dg~I~lwD~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~  238 (703)
                      |+++++.|++++.|+.|++||+.++.  +...+..+..     .. .++++.|+|++++++++..+      +.+++||+
T Consensus       296 f~~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~-----~~-~~~~~~fsp~~~~ll~~~~d------~~~~~w~l  363 (456)
T KOG0266|consen  296 FSPDGNLLVSASYDGTIRVWDLETGSKLCLKLLSGAEN-----SA-PVTSVQFSPNGKYLLSASLD------RTLKLWDL  363 (456)
T ss_pred             ECCCCCEEEEcCCCccEEEEECCCCceeeeecccCCCC-----CC-ceeEEEECCCCcEEEEecCC------CeEEEEEc
Confidence            99999999999999999999999998  4555554433     12 58999999999999998876      48999999


Q ss_pred             CCCccceeecCCccc---eEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecc-------eeeeEEEccchhhhHhhcCC
Q psy7108         239 KKGDMAARVLKPEVR---VFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDP-------FLLDISITPQSVKEALADKD  307 (703)
Q Consensus       239 ~~~~~~~~~~~h~~~---V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~-------~~~~~~~spd~~~~~l~sg~  307 (703)
                      ..+.......+|...   +.+...++.+.++++++.|+ |.+|+..++.....       ....++++|..  .++++.+
T Consensus       364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d~~v~~~~~~s~~~~~~l~~h~~~~~~~~~~~~~~--~~~~s~s  441 (456)
T KOG0266|consen  364 RSGKSVGTYTGHSNLVRCIFSPTLSTGGKLIYSGSEDGSVYVWDSSSGGILQRLEGHSKAAVSDLSSHPTE--NLIASSS  441 (456)
T ss_pred             cCCcceeeecccCCcceeEecccccCCCCeEEEEeCCceEEEEeCCccchhhhhcCCCCCceeccccCCCc--CeeeecC
Confidence            999999888888764   34445678999999999999 99999997655333       23557777877  5666665


Q ss_pred             --cceEEEEEEec
Q psy7108         308 --YAKALMMSLKL  318 (703)
Q Consensus       308 --~~~~l~la~~l  318 (703)
                        .|+.+++ |+.
T Consensus       442 ~~~d~~~~~-w~~  453 (456)
T KOG0266|consen  442 FEGDGLIRL-WKY  453 (456)
T ss_pred             cCCCceEEE-ecC
Confidence              6777776 654

>KOG0285|consensus

Probab=99.95  E-value=4.7e-27  Score=229.07  Aligned_cols=262  Identities=15%  Similarity=0.217  Sum_probs=228.6

Q ss_pred             EeeecccCCceEEecCCceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecC
Q psy7108          11 ETRETHEGGNVVLKLPGVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQL   90 (703)
Q Consensus        11 ~~~~~~~~~~~~i~~~~v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~   90 (703)
                      ...|+..+.+..+++|++.    +|++.  .++.||...|..+++|+  -..++++++.|+.|+.||++..+.++...+|
T Consensus       163 n~wf~tgs~DrtikIwDla----tg~Lk--ltltGhi~~vr~vavS~--rHpYlFs~gedk~VKCwDLe~nkvIR~YhGH  234 (460)
T KOG0285|consen  163 NEWFATGSADRTIKIWDLA----TGQLK--LTLTGHIETVRGVAVSK--RHPYLFSAGEDKQVKCWDLEYNKVIRHYHGH  234 (460)
T ss_pred             ceeEEecCCCceeEEEEcc----cCeEE--Eeecchhheeeeeeecc--cCceEEEecCCCeeEEEechhhhhHHHhccc
Confidence            4456666667777766665    89998  99999999999999999  8999999999999999999999888888999


Q ss_pred             CCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEE
Q psy7108          91 LSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILA  170 (703)
Q Consensus        91 ~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s  170 (703)
                      -+.|.|++.+|.-..|++|+.|.+++|||+++...+..+.+|..                    +|..+.+.|..-.+++
T Consensus       235 lS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~--------------------~V~~V~~~~~dpqvit  294 (460)
T KOG0285|consen  235 LSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTN--------------------PVASVMCQPTDPQVIT  294 (460)
T ss_pred             cceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCCC--------------------cceeEEeecCCCceEE
Confidence            99999999999999999999999999999999999999999876                    8999999998888999


Q ss_pred             EecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCC
Q psy7108         171 AGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKP  250 (703)
Q Consensus       171 ~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h  250 (703)
                      |+.|++|++||++.|+...++..|..        .+.+++.+|....++.++.+       .++-|++..|+.++.+.+|
T Consensus       295 ~S~D~tvrlWDl~agkt~~tlt~hkk--------svral~lhP~e~~fASas~d-------nik~w~~p~g~f~~nlsgh  359 (460)
T KOG0285|consen  295 GSHDSTVRLWDLRAGKTMITLTHHKK--------SVRALCLHPKENLFASASPD-------NIKQWKLPEGEFLQNLSGH  359 (460)
T ss_pred             ecCCceEEEeeeccCceeEeeecccc--------eeeEEecCCchhhhhccCCc-------cceeccCCccchhhccccc
Confidence            99999999999999998888876655        88999999998887777765       5999999999999999999


Q ss_pred             ccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceeccee--------------eeEEEccchhhhHhhcCCcceEEEEE
Q psy7108         251 EVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPFL--------------LDISITPQSVKEALADKDYAKALMMS  315 (703)
Q Consensus       251 ~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~~--------------~~~~~spd~~~~~l~sg~~~~~l~la  315 (703)
                      ...|++++.+.|| .+++|+++| +..||..+|..++...              ...+|...+  .-|.++..|++|.+ 
T Consensus       360 ~~iintl~~nsD~-v~~~G~dng~~~fwdwksg~nyQ~~~t~vqpGSl~sEagI~as~fDktg--~rlit~eadKtIk~-  435 (460)
T KOG0285|consen  360 NAIINTLSVNSDG-VLVSGGDNGSIMFWDWKSGHNYQRGQTIVQPGSLESEAGIFASCFDKTG--SRLITGEADKTIKM-  435 (460)
T ss_pred             cceeeeeeeccCc-eEEEcCCceEEEEEecCcCcccccccccccCCccccccceeEEeecccC--ceEEeccCCcceEE-
Confidence            9999999998776 678899889 9999999987765542              234555556  55788899999998 


Q ss_pred             EecC
Q psy7108         316 LKLN  319 (703)
Q Consensus       316 ~~l~  319 (703)
                      |+-+
T Consensus       436 ~keD  439 (460)
T KOG0285|consen  436 YKED  439 (460)
T ss_pred             Eecc
Confidence            7654

>KOG0310|consensus

Probab=99.95  E-value=1.9e-26  Score=234.01  Aligned_cols=333  Identities=13%  Similarity=0.185  Sum_probs=251.4

Q ss_pred             Cceeecc-CCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCC-C
Q psy7108          27 GVKKGDM-AARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDG-T  104 (703)
Q Consensus        27 ~v~~~d~-tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg-~  104 (703)
                      .+++++. +-...  +++....+.|+++.|..  ||.+||.|+..|.|+|+|+.+...++....|..+|..+.|+|++ .
T Consensus        49 rvqly~~~~~~~~--k~~srFk~~v~s~~fR~--DG~LlaaGD~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t  124 (487)
T KOG0310|consen   49 RVQLYSSVTRSVR--KTFSRFKDVVYSVDFRS--DGRLLAAGDESGHVKVFDMKSRVILRQLYAHQAPVHVTKFSPQDNT  124 (487)
T ss_pred             EEEEEecchhhhh--hhHHhhccceeEEEeec--CCeEEEccCCcCcEEEeccccHHHHHHHhhccCceeEEEecccCCe
Confidence            3555553 33444  66778889999999999  99999999999999999976655567777899999999999976 4


Q ss_pred             EEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC-CCEEEEEecCCcEEEEECC
Q psy7108         105 EIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD-GSCILAAGQSKYICIYSSR  183 (703)
Q Consensus       105 ~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd-g~~l~s~s~dg~I~lwD~~  183 (703)
                      .+++|+.|+.+++||+.++.....+.+|.+                    .|.|.+|+|- +..+++||.||.|++||++
T Consensus       125 ~l~s~sDd~v~k~~d~s~a~v~~~l~~htD--------------------YVR~g~~~~~~~hivvtGsYDg~vrl~DtR  184 (487)
T KOG0310|consen  125 MLVSGSDDKVVKYWDLSTAYVQAELSGHTD--------------------YVRCGDISPANDHIVVTGSYDGKVRLWDTR  184 (487)
T ss_pred             EEEecCCCceEEEEEcCCcEEEEEecCCcc--------------------eeEeeccccCCCeEEEecCCCceEEEEEec
Confidence            677888899999999999987667888877                    8999999995 4578899999999999999


Q ss_pred             CC-ceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC-ccceeecCCccceEEEEEcC
Q psy7108         184 EG-ILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG-DMAARVLKPEVRVFCVKFSP  261 (703)
Q Consensus       184 ~~-~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~-~~~~~~~~h~~~V~~l~~sp  261 (703)
                      .. ..+..+.         |..+|.++.+-|.|..++++++.       .+++||+.+| +.+.....|...|+|+++..
T Consensus       185 ~~~~~v~eln---------hg~pVe~vl~lpsgs~iasAgGn-------~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s  248 (487)
T KOG0310|consen  185 SLTSRVVELN---------HGCPVESVLALPSGSLIASAGGN-------SVKVWDLTTGGQLLTSMFNHNKTVTCLRLAS  248 (487)
T ss_pred             cCCceeEEec---------CCCceeeEEEcCCCCEEEEcCCC-------eEEEEEecCCceehhhhhcccceEEEEEeec
Confidence            87 4555543         44589999999999998887764       7999999965 55555666999999999999


Q ss_pred             CCCEEEEEeCCC-EEEEEcCCCceecce-----eeeEEEccchhhhHhhcCCcceEEEEE--------------------
Q psy7108         262 TGQAWVAATTEG-VHIYSLDSGYVFDPF-----LLDISITPQSVKEALADKDYAKALMMS--------------------  315 (703)
Q Consensus       262 dg~~l~s~s~Dg-v~iwd~~~~~~~~~~-----~~~~~~spd~~~~~l~sg~~~~~l~la--------------------  315 (703)
                      ++..|++++-|+ +++|++.+-+....+     .++++++|++  ..+..|-.++.+...                    
T Consensus       249 ~~~rLlS~sLD~~VKVfd~t~~Kvv~s~~~~~pvLsiavs~dd--~t~viGmsnGlv~~rr~~~k~k~s~~~~~r~~r~~  326 (487)
T KOG0310|consen  249 DSTRLLSGSLDRHVKVFDTTNYKVVHSWKYPGPVLSIAVSPDD--QTVVIGMSNGLVSIRRREVKKKPSKEPKRRADRSD  326 (487)
T ss_pred             CCceEeecccccceEEEEccceEEEEeeecccceeeEEecCCC--ceEEEecccceeeeehhhcccCCCccccccccccc
Confidence            999999999999 999998776665444     4778888865  333333222222110                    


Q ss_pred             -----------------------------------------------Ee-cCchhHHHHHhhcc-CcchHHHHHhhccHH
Q psy7108         316 -----------------------------------------------LK-LNEQGLIIHVLENI-RTRDIALTVRSLAEI  346 (703)
Q Consensus       316 -----------------------------------------------~~-l~~~~~~~~v~~~~-~~~~i~~~~~~l~~~  346 (703)
                                                                     +. ...+..+..+++.+ ....+..++.+....
T Consensus       327 ~~~v~~r~~~~~~~~ddiv~n~~~r~~L~~~Dk~Lk~F~~kkALd~vl~~~~~pelvvavl~eL~~Rg~l~~AL~grde~  406 (487)
T KOG0310|consen  327 GFFVKVRGQNYKGQKDDIVVNEVKRLKLTYFDKRLKQFKHKKALDHVLEPKKDPELVVAVLSELVHRGGLRRALAGRDES  406 (487)
T ss_pred             cceEeeeccccccccceeEeccccccCCchHHHHHhhhhHHHHHHHHhcccCChhHHHHHHHHHHHhhHHHHHhcCccHH
Confidence                                                           00 00111111111111 234566777788899


Q ss_pred             HHHHHHHHHHHHHhcCCChHHHHHHHHHHHHH--cCCCchh----hHHHHHHHHHHHHhhh
Q psy7108         347 YLEKLLKFIAAMLEVSKHIEFYVSWVSQILMV--LKSPSQT----TLVHLQRNLNKKYSDL  401 (703)
Q Consensus       347 ~~~~ll~~~~~~~~~~~~~e~~~~~l~~~l~~--l~~~~~~----~l~~L~~~l~~~~~~~  401 (703)
                      .+..+|.|+.+.++..++...+..|...+|..  ..+.+.+    .++.|+..+++.....
T Consensus       407 eL~~lLnfl~~~l~~~rf~~~L~~~~~~iLd~Y~~~i~~s~~l~k~i~~L~~~V~~Ev~~q  467 (487)
T KOG0310|consen  407 ELAPLLNFLVKNLTVVRFASILMEVVSVILDLYARDIEGSPMLAKLIQALRGKVEQEVRVQ  467 (487)
T ss_pred             HHHHHHHHHHhhccchhhHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999  2233333    5566666665554443

>KOG0645|consensus

Probab=99.95  E-value=1.1e-25  Score=212.57  Aligned_cols=237  Identities=19%  Similarity=0.313  Sum_probs=196.1

Q ss_pred             ccccCCCcCeEEEEEcCCCC-CCEEEEEeCCCcEEEEEcCCCc--eeEEEe--cCCCcEEEEEEecCCCEEEEEECCCeE
Q psy7108          41 EVLSGHEGPVSCIEFSPVLS-STGMVSASWDKTVKLWNAVETD--TQHETI--QLLSDALCVAYKPDGTEIVVATLDGQL  115 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~d-g~~L~sgs~Dg~V~iWd~~~~~--~~~~~~--~~~~~V~~v~~spdg~~las~s~dg~I  115 (703)
                      +.+++|+++|..++|+|  . |..|||||.|+.||+|+...+.  .++..+  .|+..|++++|+|.|++||+|+.|.++
T Consensus         8 ~~~~gh~~r~W~~awhp--~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t~   85 (312)
T KOG0645|consen    8 QKLSGHKDRVWSVAWHP--GKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDATV   85 (312)
T ss_pred             EeecCCCCcEEEEEecc--CCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccceE
Confidence            67899999999999999  5 7899999999999999987532  223333  388999999999999999999999999


Q ss_pred             EEEEcCCC--cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCC---ceEEE
Q psy7108         116 IMFDVESA--AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREG---ILLKK  190 (703)
Q Consensus       116 ~vwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~---~~~~~  190 (703)
                      .||.-..+  +++.++++|..                    .|.+++|+++|++||+|++|+.|.+|.+..+   .+...
T Consensus        86 ~Iw~k~~~efecv~~lEGHEn--------------------EVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aV  145 (312)
T KOG0645|consen   86 VIWKKEDGEFECVATLEGHEN--------------------EVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAV  145 (312)
T ss_pred             EEeecCCCceeEEeeeecccc--------------------ceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEee
Confidence            99986644  67888999876                    8999999999999999999999999999854   34444


Q ss_pred             EEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC---CCccceeecCCccceEEEEEcCCCCEEE
Q psy7108         191 FTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK---KGDMAARVLKPEVRVFCVKFSPTGQAWV  267 (703)
Q Consensus       191 ~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~---~~~~~~~~~~h~~~V~~l~~spdg~~l~  267 (703)
                      ++        .|...|..+.|+|....++.++.+      .+|++|+-.   ..++.+++.+|+..|++++|+|.|..|+
T Consensus       146 L~--------~HtqDVK~V~WHPt~dlL~S~SYD------nTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~  211 (312)
T KOG0645|consen  146 LQ--------EHTQDVKHVIWHPTEDLLFSCSYD------NTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLV  211 (312)
T ss_pred             ec--------cccccccEEEEcCCcceeEEeccC------CeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEE
Confidence            44        445589999999999998888776      389999654   4578899999999999999999999999


Q ss_pred             EEeCCC-EEEEEcCCCc--eecceeeeEEEccchhhhHhhcCCcceEEEEEEec
Q psy7108         268 AATTEG-VHIYSLDSGY--VFDPFLLDISITPQSVKEALADKDYAKALMMSLKL  318 (703)
Q Consensus       268 s~s~Dg-v~iwd~~~~~--~~~~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l  318 (703)
                      ++++|+ ++||..-+.-  .+......+.|. ++   .++++..|.++++ ++-
T Consensus       212 s~sdD~tv~Iw~~~~~~~~~~sr~~Y~v~W~-~~---~IaS~ggD~~i~l-f~~  260 (312)
T KOG0645|consen  212 SCSDDGTVSIWRLYTDLSGMHSRALYDVPWD-NG---VIASGGGDDAIRL-FKE  260 (312)
T ss_pred             EecCCcceEeeeeccCcchhcccceEeeeec-cc---ceEeccCCCEEEE-EEe
Confidence            999999 9999954332  233334556776 44   7899999999998 443

>KOG0291|consensus

Probab=99.95  E-value=1.2e-25  Score=237.94  Aligned_cols=245  Identities=16%  Similarity=0.286  Sum_probs=206.9

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEc
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDV  120 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~  120 (703)
                      -..+||...++|++++|  ||+++|||+.||.|+|||..++-+...+..|.+.|+.+.|+..|+.+++++.||+|+.||+
T Consensus       344 lKQQgH~~~i~~l~YSp--Dgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDl  421 (893)
T KOG0291|consen  344 LKQQGHSDRITSLAYSP--DGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDL  421 (893)
T ss_pred             eeccccccceeeEEECC--CCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeee
Confidence            34579999999999999  9999999999999999999999888888899999999999999999999999999999999


Q ss_pred             CCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCc-EEEEECCCCceEEEEEeccCCcc
Q psy7108         121 ESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKY-ICIYSSREGILLKKFTITQNKSL  199 (703)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~-I~lwD~~~~~~~~~~~~~~~~~~  199 (703)
                      ...+..+++.....                   ....|++..|.|..+.+|+.|.. |.+|++++|+.+..+.+|     
T Consensus       422 kRYrNfRTft~P~p-------------------~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGH-----  477 (893)
T KOG0291|consen  422 KRYRNFRTFTSPEP-------------------IQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGH-----  477 (893)
T ss_pred             cccceeeeecCCCc-------------------eeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCC-----
Confidence            99999999987653                   26789999999999999988875 999999999998877654     


Q ss_pred             ccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEE
Q psy7108         200 DGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYS  278 (703)
Q Consensus       200 ~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd  278 (703)
                         +.+|.+++|+|+|..+++++.+      ++|++||+-..........+...+.+++|+|||+.+|+++-|| |.+||
T Consensus       478 ---EgPVs~l~f~~~~~~LaS~SWD------kTVRiW~if~s~~~vEtl~i~sdvl~vsfrPdG~elaVaTldgqItf~d  548 (893)
T KOG0291|consen  478 ---EGPVSGLSFSPDGSLLASGSWD------KTVRIWDIFSSSGTVETLEIRSDVLAVSFRPDGKELAVATLDGQITFFD  548 (893)
T ss_pred             ---CCcceeeEEccccCeEEecccc------ceEEEEEeeccCceeeeEeeccceeEEEEcCCCCeEEEEEecceEEEEE
Confidence               4599999999999998888876      5999999765533334445667799999999999999999999 99999


Q ss_pred             cCCCceecce--------------------------eeeEEEccchhhhHhhcCCcceEEEEEEecCchhH
Q psy7108         279 LDSGYVFDPF--------------------------LLDISITPQSVKEALADKDYAKALMMSLKLNEQGL  323 (703)
Q Consensus       279 ~~~~~~~~~~--------------------------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~~~  323 (703)
                      ...+......                          -..+++|+||  .++.+|+....+.+ ....+..+
T Consensus       549 ~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~sa~~K~Ftti~ySaDG--~~IlAgG~sn~iCi-Y~v~~~vl  616 (893)
T KOG0291|consen  549 IKEAVQVGSIDGRKDLSGGRKETDRITAENSAKGKTFTTICYSADG--KCILAGGESNSICI-YDVPEGVL  616 (893)
T ss_pred             hhhceeeccccchhhccccccccceeehhhcccCCceEEEEEcCCC--CEEEecCCcccEEE-EECchhhe
Confidence            8765443111                          1458999999  77777777777776 55554433

>KOG0306|consensus

Probab=99.94  E-value=1.7e-25  Score=236.69  Aligned_cols=345  Identities=20%  Similarity=0.283  Sum_probs=263.0

Q ss_pred             CCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCC-----Ccee-------EEEecCCCcEEEEEEecC
Q psy7108          35 ARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVE-----TDTQ-------HETIQLLSDALCVAYKPD  102 (703)
Q Consensus        35 g~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~-----~~~~-------~~~~~~~~~V~~v~~spd  102 (703)
                      +.++  .+..+|.+.|++++.+|  |+..++|||.|++|++||..-     +.+.       ..++...+.|.|+++|||
T Consensus       444 ~~l~--Eti~AHdgaIWsi~~~p--D~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spd  519 (888)
T KOG0306|consen  444 ASLV--ETIRAHDGAIWSISLSP--DNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPD  519 (888)
T ss_pred             hhhh--hhhhccccceeeeeecC--CCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCC
Confidence            3455  67789999999999999  999999999999999999741     1111       134456789999999999


Q ss_pred             CCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEEC
Q psy7108         103 GTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSS  182 (703)
Q Consensus       103 g~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~  182 (703)
                      |++||++-.|.+|+||-+++-+..-++.||.-                    +|.|+..+||++.+++||.|++|++|-+
T Consensus       520 gk~LaVsLLdnTVkVyflDtlKFflsLYGHkL--------------------PV~smDIS~DSklivTgSADKnVKiWGL  579 (888)
T KOG0306|consen  520 GKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKL--------------------PVLSMDISPDSKLIVTGSADKNVKIWGL  579 (888)
T ss_pred             CcEEEEEeccCeEEEEEecceeeeeeeccccc--------------------ceeEEeccCCcCeEEeccCCCceEEecc
Confidence            99999999999999999999999999999987                    9999999999999999999999999999


Q ss_pred             CCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCC
Q psy7108         183 REGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPT  262 (703)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spd  262 (703)
                      .-|.|.+.+-.        |.+.|.++.|.|....+++++.+      ..++-||-.+.+.++.+.+|...|++++.+|+
T Consensus       580 dFGDCHKS~fA--------HdDSvm~V~F~P~~~~FFt~gKD------~kvKqWDg~kFe~iq~L~~H~~ev~cLav~~~  645 (888)
T KOG0306|consen  580 DFGDCHKSFFA--------HDDSVMSVQFLPKTHLFFTCGKD------GKVKQWDGEKFEEIQKLDGHHSEVWCLAVSPN  645 (888)
T ss_pred             ccchhhhhhhc--------ccCceeEEEEcccceeEEEecCc------ceEEeechhhhhhheeeccchheeeeeEEcCC
Confidence            99988777654        55599999999987777776665      38999999999999999999999999999999


Q ss_pred             CCEEEEEeCCC-EEEEEcCCCceeccee---------------e-----------eEEEccchhh----------hHhh-
Q psy7108         263 GQAWVAATTEG-VHIYSLDSGYVFDPFL---------------L-----------DISITPQSVK----------EALA-  304 (703)
Q Consensus       263 g~~l~s~s~Dg-v~iwd~~~~~~~~~~~---------------~-----------~~~~spd~~~----------~~l~-  304 (703)
                      |.++++++.|. |++|.......+-...               .           ...++.....          ..+- 
T Consensus       646 G~~vvs~shD~sIRlwE~tde~~~lEeekE~ErEe~yE~l~~~~e~~~~~~~~~g~~~~~skkTieSvk~aE~i~ea~di  725 (888)
T KOG0306|consen  646 GSFVVSSSHDKSIRLWERTDEILILEEEKEGEREEEYETLLASEEVVAGDGSADGDAGVASKKTIESVKSAERILEALDI  725 (888)
T ss_pred             CCeEEeccCCceeEeeeccCcceeeehhhhhhhHHHHHHhhhhcccccCCCcccccccchhhhhhHHHHHHHHHHHHHHH
Confidence            99999999999 9999976533211100               0           0000000000          0000 


Q ss_pred             ------------cCCcceEEEEEEecCchhHHHHHhhccCcchHHHHHhhccHHHHHHHHHHHHHHHhcCCChHHHHHHH
Q psy7108         305 ------------DKDYAKALMMSLKLNEQGLIIHVLENIRTRDIALTVRSLAEIYLEKLLKFIAAMLEVSKHIEFYVSWV  372 (703)
Q Consensus       305 ------------sg~~~~~l~la~~l~~~~~~~~v~~~~~~~~i~~~~~~l~~~~~~~ll~~~~~~~~~~~~~e~~~~~l  372 (703)
                                  .|.....+..++..+....+..++..+..++++.++--+|.+++..+|+++..+.....+.+++-..+
T Consensus       726 ~~~e~~~~ee~~~g~P~npll~a~~ks~e~yi~dtl~~Ir~S~Ld~aLlllPfS~V~~vl~~i~~~~q~~~~veLv~rv~  805 (888)
T KOG0306|consen  726 GREELTQLEEYSPGHPHNPLLNAYNKSPEKYIVDTLMKIRASELDDALLLLPFSYVLDVLKFIDECIQRKSKVELVCRVL  805 (888)
T ss_pred             HHHHHHhHHhhcCCCCCcHHHHHhcCCHHHHHHHHHHhcchhhhhhhheeccHHHHHHHHHHHHHHHcCCCcceeEeeee
Confidence                        01111233334454445566777777888889999999999999999999999998888899888877


Q ss_pred             HHHHHH----cCCCchh--hHHHHHHHHHHHHhhhhceecccCCCcccchhhhh
Q psy7108         373 SQILMV----LKSPSQT--TLVHLQRNLNKKYSDLAKISCQFDDTKFLPPTLFA  420 (703)
Q Consensus       373 ~~~l~~----l~~~~~~--~l~~L~~~l~~~~~~~~~l~~~~n~~~~sl~~~la  420 (703)
                      -.+++.    +..+...  .++.+..-+....+..... ..+|  -..|.|+..
T Consensus       806 ~fL~rih~~~it~~~~~kp~l~~i~s~l~~~v~q~rdv-~G~N--lagL~~l~~  856 (888)
T KOG0306|consen  806 FFLLRIHHKQITAHKNMKPLLEKIKSKLREIVEQLRDV-LGFN--LAGLSLLKQ  856 (888)
T ss_pred             eehhhhhhhhhccccchHHHHHHHHHHHHHHHHHhhhh-hhhh--hhHHHHHHH
Confidence            777777    3333322  6666666666666655555 3344  344555544

>KOG0318|consensus

Probab=99.94  E-value=5.1e-25  Score=224.87  Aligned_cols=273  Identities=15%  Similarity=0.252  Sum_probs=216.2

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEe---cCCCcEEEEEEecCCCEEEEEECCCeEEE
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETI---QLLSDALCVAYKPDGTEIVVATLDGQLIM  117 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~---~~~~~V~~v~~spdg~~las~s~dg~I~v  117 (703)
                      .++..|..-|+|++|+|  ||.+++|++.||++.+||=.+++.+..+-   .|.+.|.+++|+||++.+++++.|.+++|
T Consensus       184 ~s~r~HskFV~~VRysP--DG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KI  261 (603)
T KOG0318|consen  184 SSFREHSKFVNCVRYSP--DGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKI  261 (603)
T ss_pred             ecccccccceeeEEECC--CCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEE
Confidence            46678999999999999  99999999999999999999998887776   69999999999999999999999999999


Q ss_pred             EEcCCCcEEEEEeccccCCCCC-----------------------CCCccchhhcccCCccEEEEEEcCCCCEEEEEecC
Q psy7108         118 FDVESAAQVGSVEARRDLDSGR-----------------------LDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS  174 (703)
Q Consensus       118 wd~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d  174 (703)
                      ||+.+.+.++++.....+....                       ...........+|.+.|++++.+||+++|++|+.|
T Consensus       262 WdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyD  341 (603)
T KOG0318|consen  262 WDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYD  341 (603)
T ss_pred             EEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccC
Confidence            9999998888776544321110                       11111344567899999999999999999999999


Q ss_pred             CcEEEEECCCCceEE-----------EEEeccC------------------------C-------c--------------
Q psy7108         175 KYICIYSSREGILLK-----------KFTITQN------------------------K-------S--------------  198 (703)
Q Consensus       175 g~I~lwD~~~~~~~~-----------~~~~~~~------------------------~-------~--------------  198 (703)
                      |.|.-||..++..-+           .+.....                        .       .              
T Consensus       342 G~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~av  421 (603)
T KOG0318|consen  342 GHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAV  421 (603)
T ss_pred             ceEEEEecCCccccccccccccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEE
Confidence            999999987654321           1111110                        0       0              


Q ss_pred             ---------cc--------cccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcc--ceeecCCccceEEEEE
Q psy7108         199 ---------LD--------GINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDM--AARVLKPEVRVFCVKF  259 (703)
Q Consensus       199 ---------~~--------~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~--~~~~~~h~~~V~~l~~  259 (703)
                               +.        ...-...+++++|++...++++.++      .+++|.+..++.  ......|.+.|+++++
T Consensus       422 v~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaVGG~Dg------kvhvysl~g~~l~ee~~~~~h~a~iT~vay  495 (603)
T KOG0318|consen  422 VACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSEVAVGGQDG------KVHVYSLSGDELKEEAKLLEHRAAITDVAY  495 (603)
T ss_pred             EEecCcEEEEecCCcceeeccccccceEEEcCCCCEEEEecccc------eEEEEEecCCcccceeeeecccCCceEEEE
Confidence                     00        0112345678888998888877764      699998876543  3345679999999999


Q ss_pred             cCCCCEEEEEeCCC-EEEEEcCCCcee-------cceeeeEEEccchhhhHhhcCCcceEEEEEEecCchhHH
Q psy7108         260 SPTGQAWVAATTEG-VHIYSLDSGYVF-------DPFLLDISITPQSVKEALADKDYAKALMMSLKLNEQGLI  324 (703)
Q Consensus       260 spdg~~l~s~s~Dg-v~iwd~~~~~~~-------~~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~~~~  324 (703)
                      |||+.+||++...+ +.+||+.+.+..       ..-..+++|+|+.  ..+|+|+.|..+.+ |.+++|...
T Consensus       496 Spd~~yla~~Da~rkvv~yd~~s~~~~~~~w~FHtakI~~~aWsP~n--~~vATGSlDt~Vii-ysv~kP~~~  565 (603)
T KOG0318|consen  496 SPDGAYLAAGDASRKVVLYDVASREVKTNRWAFHTAKINCVAWSPNN--KLVATGSLDTNVII-YSVKKPAKH  565 (603)
T ss_pred             CCCCcEEEEeccCCcEEEEEcccCceecceeeeeeeeEEEEEeCCCc--eEEEeccccceEEE-EEccChhhh
Confidence            99999999999999 999999987762       2224679999999  89999999999998 999988655

>KOG0266|consensus

Probab=99.94  E-value=1.3e-25  Score=246.45  Aligned_cols=248  Identities=19%  Similarity=0.365  Sum_probs=211.7

Q ss_pred             ccccCC-CcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc--eeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEE
Q psy7108          41 EVLSGH-EGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD--TQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIM  117 (703)
Q Consensus        41 ~~l~gH-~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~--~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~v  117 (703)
                      ..+.+| ...|.++.|+|  +|..+++++.|+.+++|+..+..  ......+|...|.+++|+||++++++++.|++|++
T Consensus       152 ~~~~~~~~~sv~~~~fs~--~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiri  229 (456)
T KOG0266|consen  152 QTLAGHECPSVTCVDFSP--DGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRI  229 (456)
T ss_pred             eeecccccCceEEEEEcC--CCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCceEEE
Confidence            445454 78999999999  99999999999999999997665  45555679999999999999999999999999999


Q ss_pred             EEc-CCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccC
Q psy7108         118 FDV-ESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQN  196 (703)
Q Consensus       118 wd~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~  196 (703)
                      ||+ ..+..++++.+|..                    .|++++|+|+|+.+++|+.|++|++||++++++++.+..|..
T Consensus       230 wd~~~~~~~~~~l~gH~~--------------------~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~  289 (456)
T KOG0266|consen  230 WDLKDDGRNLKTLKGHST--------------------YVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSD  289 (456)
T ss_pred             eeccCCCeEEEEecCCCC--------------------ceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCC
Confidence            999 56688999999876                    899999999999999999999999999999999999887665


Q ss_pred             CccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCc--cceeecCCccc--eEEEEEcCCCCEEEEEeCC
Q psy7108         197 KSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGD--MAARVLKPEVR--VFCVKFSPTGQAWVAATTE  272 (703)
Q Consensus       197 ~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~--~~~~~~~h~~~--V~~l~~spdg~~l~s~s~D  272 (703)
                              .|++++|+++|..+++++.+      ..+++||+.++.  +...+.++...  ++++.|+|++.++++++.|
T Consensus       290 --------~is~~~f~~d~~~l~s~s~d------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d  355 (456)
T KOG0266|consen  290 --------GISGLAFSPDGNLLVSASYD------GTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLD  355 (456)
T ss_pred             --------ceEEEEECCCCCEEEEcCCC------ccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCC
Confidence                    89999999999999998665      389999999998  45666665554  9999999999999999999


Q ss_pred             C-EEEEEcCCCceeccee---------eeEEEccchhhhHhhcCCcceEEEEEEecCchhHHHHH
Q psy7108         273 G-VHIYSLDSGYVFDPFL---------LDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIHV  327 (703)
Q Consensus       273 g-v~iwd~~~~~~~~~~~---------~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~~~~~~v  327 (703)
                      + +++|++..+.....+.         .....++.+  .++.+|..+..+.+ |.+.....+..+
T Consensus       356 ~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~sg~~d~~v~~-~~~~s~~~~~~l  417 (456)
T KOG0266|consen  356 RTLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTGG--KLIYSGSEDGSVYV-WDSSSGGILQRL  417 (456)
T ss_pred             CeEEEEEccCCcceeeecccCCcceeEecccccCCC--CeEEEEeCCceEEE-EeCCccchhhhh
Confidence            9 9999999876644332         123335666  78899999999998 998875555544

>KOG0265|consensus

Probab=99.94  E-value=1.1e-25  Score=215.39  Aligned_cols=240  Identities=14%  Similarity=0.211  Sum_probs=204.9

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCC-ceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEE
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVET-DTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFD  119 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~-~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd  119 (703)
                      ..+.||++.|+.+.|+|  +|..||||+.|..|.+|++... +.......|.+.|..+.|.+|++.+++++.|++|+.||
T Consensus        41 m~l~gh~geI~~~~F~P--~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD  118 (338)
T KOG0265|consen   41 MLLPGHKGEIYTIKFHP--DGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWD  118 (338)
T ss_pred             hhcCCCcceEEEEEECC--CCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEe
Confidence            56789999999999999  9999999999999999997544 33456668999999999999999999999999999999


Q ss_pred             cCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCC-EEEEEecCCcEEEEECCCCceEEEEEeccCCc
Q psy7108         120 VESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGS-CILAAGQSKYICIYSSREGILLKKFTITQNKS  198 (703)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~-~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~  198 (703)
                      +++|+....+++|..                    .|+++.-+.-|. ++.+++.|+++++||+++..++++++..    
T Consensus       119 ~~tG~~~rk~k~h~~--------------------~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~k----  174 (338)
T KOG0265|consen  119 AETGKRIRKHKGHTS--------------------FVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENK----  174 (338)
T ss_pred             cccceeeehhccccc--------------------eeeecCccccCCeEEEecCCCceEEEEeecccchhhccccc----
Confidence            999999999988876                    677777444454 4557889999999999998888877422    


Q ss_pred             cccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEE
Q psy7108         199 LDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIY  277 (703)
Q Consensus       199 ~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iw  277 (703)
                           ..++++.|..++..++.++-+      +.|++||++.++....+.+|.+.|+.+..+|+|.++.+-+.|. +++|
T Consensus       175 -----yqltAv~f~d~s~qv~sggId------n~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvw  243 (338)
T KOG0265|consen  175 -----YQLTAVGFKDTSDQVISGGID------NDIKVWDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVW  243 (338)
T ss_pred             -----eeEEEEEecccccceeecccc------CceeeeccccCcceEEeecccCceeeEEeccCCCccccccccceEEEE
Confidence                 367889999999988887765      3799999999999999999999999999999999999999999 9999


Q ss_pred             EcCCCc----eeccee----------eeEEEccchhhhHhhcCCcceEEEEEEecCc
Q psy7108         278 SLDSGY----VFDPFL----------LDISITPQSVKEALADKDYAKALMMSLKLNE  320 (703)
Q Consensus       278 d~~~~~----~~~~~~----------~~~~~spd~~~~~l~sg~~~~~l~la~~l~~  320 (703)
                      |+.--.    ++..++          +..+|+|++  ..+..|+.|+.+.+ |+...
T Consensus       244 d~rp~~p~~R~v~if~g~~hnfeknlL~cswsp~~--~~i~ags~dr~vyv-wd~~~  297 (338)
T KOG0265|consen  244 DVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSPNG--TKITAGSADRFVYV-WDTTS  297 (338)
T ss_pred             EecccCCCCceEEEeecchhhhhhhcceeeccCCC--CccccccccceEEE-eeccc
Confidence            986432    233332          568999999  88999999998887 87654

>KOG0295|consensus

Probab=99.94  E-value=1.6e-26  Score=226.23  Aligned_cols=245  Identities=18%  Similarity=0.306  Sum_probs=218.9

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEc
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDV  120 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~  120 (703)
                      ..+.||..+|+.+-|+|  +-..+++++.|++|++||..+++....+.+|.+.|.+++|+..|+++++++.|-.+++||.
T Consensus       102 ~~l~g~r~~vt~v~~hp--~~~~v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~  179 (406)
T KOG0295|consen  102 QKLAGHRSSVTRVIFHP--SEALVVSASEDATIKVFDTETGELERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDF  179 (406)
T ss_pred             hhhhccccceeeeeecc--CceEEEEecCCceEEEEEccchhhhhhhhccccceeEEEEecCccEEEecCCccchhheeH
Confidence            67889999999999999  8999999999999999999999888888899999999999999999999999999999999


Q ss_pred             CC-CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCcc
Q psy7108         121 ES-AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSL  199 (703)
Q Consensus       121 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~  199 (703)
                      ++ .++++.+.+|..                    .|.+++|-|.|.+|++++.|.+|+.|++.++-++++|.+|..   
T Consensus       180 ~~~~~c~ks~~gh~h--------------------~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~~h~e---  236 (406)
T KOG0295|consen  180 DTFFRCIKSLIGHEH--------------------GVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFPGHSE---  236 (406)
T ss_pred             HHHHHHHHHhcCccc--------------------ceeeEEEEecCCeeeecccccceeEEecccceeEEeccCchH---
Confidence            76 455555556554                    899999999999999999999999999999999999886554   


Q ss_pred             ccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCC---------------CC
Q psy7108         200 DGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPT---------------GQ  264 (703)
Q Consensus       200 ~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spd---------------g~  264 (703)
                           +|..+..+.||..+++++.+      .++++|-+.++++...+..|+-+|.+++|.|.               ++
T Consensus       237 -----wvr~v~v~~DGti~As~s~d------qtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~  305 (406)
T KOG0295|consen  237 -----WVRMVRVNQDGTIIASCSND------QTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQ  305 (406)
T ss_pred             -----hEEEEEecCCeeEEEecCCC------ceEEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCcc
Confidence                 99999999999988876665      49999999999999999999999999999874               25


Q ss_pred             EEEEEeCCC-EEEEEcCCCceec------ceeeeEEEccchhhhHhhcCCcceEEEEEEecCchhHH
Q psy7108         265 AWVAATTEG-VHIYSLDSGYVFD------PFLLDISITPQSVKEALADKDYAKALMMSLKLNEQGLI  324 (703)
Q Consensus       265 ~l~s~s~Dg-v~iwd~~~~~~~~------~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~~~~  324 (703)
                      ++.+++.|+ |++||+.++.++-      ..+.+++|+|.|  +++.+...|+++++ |+++..+..
T Consensus       306 ~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~G--kyi~ScaDDktlrv-wdl~~~~cm  369 (406)
T KOG0295|consen  306 VLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGG--KYILSCADDKTLRV-WDLKNLQCM  369 (406)
T ss_pred             EEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcCCC--eEEEEEecCCcEEE-EEeccceee
Confidence            889999999 9999999998854      445789999999  99999999999999 999865433

>KOG2624|consensus

Probab=99.94  E-value=9.6e-28  Score=250.82  Aligned_cols=118  Identities=40%  Similarity=0.667  Sum_probs=112.7

Q ss_pred             cccCCCcccchhhhhhcccccccceeecccCccccccCcccCcC-CccceeeeecccchhhhhhhhcCCccccccccccc
Q psy7108         406 CQFDDTKFLPPTLFARMRTRGYDIWLWNARGNVYSREHVNLTSE-QNKFYRFSCDFNVYTLELISRLGPLRIKPKVEKME  484 (703)
Q Consensus       406 ~~~n~~~~sl~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  484 (703)
                      |..|++++||+|++++   +||||||+|.|||.|||+|+++.+. +.+||+|+|+                         
T Consensus        89 Wv~n~p~~sLaf~Lad---aGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~-------------------------  140 (403)
T KOG2624|consen   89 WVLNGPEQSLAFLLAD---AGYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWH-------------------------  140 (403)
T ss_pred             ceecCccccHHHHHHH---cCCceeeecCcCcccchhhcccCCcCCcceeecchh-------------------------
Confidence            6688899999999997   9999999999999999999999996 8889999999                         


Q ss_pred             CCCCCCcCCCcccceeecccCcCCCCCCccccccCchhhhhcccCCchhhHHHhHccCCCcceEEEEEecCceeeeeccC
Q psy7108         485 TGSSDEESSKDDETEIRVLDEDVPRSSDTGDIQLKSTRMNELGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGS  564 (703)
Q Consensus       485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~  564 (703)
                                                              |||.||+||+||||++.|++++++|+|||||++.+|++++
T Consensus       141 ----------------------------------------Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS  180 (403)
T KOG2624|consen  141 ----------------------------------------EMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLS  180 (403)
T ss_pred             ----------------------------------------hhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhc
Confidence                                                    9999999999999999999999999999999999999999


Q ss_pred             CCchhhhhHHHhhhhhhhhhcccccch
Q psy7108         565 LRPEYQTKVRLNVLWAQSAFLGNLVTK  591 (703)
Q Consensus       565 ~~~~~~~~~~~~~~~~p~~~~~~~~~~  591 (703)
                      .+|++++||+.++++||+++.++..+.
T Consensus       181 ~~p~~~~kI~~~~aLAP~~~~k~~~~~  207 (403)
T KOG2624|consen  181 ERPEYNKKIKSFIALAPAAFPKHIKSL  207 (403)
T ss_pred             ccchhhhhhheeeeecchhhhcccccH
Confidence            999999999999999999999876653

>KOG0319|consensus

Probab=99.94  E-value=3.4e-25  Score=234.58  Aligned_cols=261  Identities=13%  Similarity=0.134  Sum_probs=214.9

Q ss_pred             ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCce----eEEEecCCCcEEEEEEecCC
Q psy7108          28 VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDT----QHETIQLLSDALCVAYKPDG  103 (703)
Q Consensus        28 v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~----~~~~~~~~~~V~~v~~spdg  103 (703)
                      +++++..+.--  ..+.||++.|.+++...  +|.+|+|||.|+++++|.++++..    .....+|.+.|.+++++..+
T Consensus       348 lr~y~~~~~~c--~ii~GH~e~vlSL~~~~--~g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~  423 (775)
T KOG0319|consen  348 LRLYTLPTSYC--QIIPGHTEAVLSLDVWS--SGDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLG  423 (775)
T ss_pred             eEEEecCCCce--EEEeCchhheeeeeecc--cCcEEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeecccC
Confidence            55566444443  58899999999999555  689999999999999998854432    34445699999999998766


Q ss_pred             -CEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEEC
Q psy7108         104 -TEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSS  182 (703)
Q Consensus       104 -~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~  182 (703)
                       ..|+++|.|+++++|++...+....           ...-........|.+.|++++++|+.+.+++||.|++.++|++
T Consensus       424 asffvsvS~D~tlK~W~l~~s~~~~~-----------~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~l  492 (775)
T KOG0319|consen  424 ASFFVSVSQDCTLKLWDLPKSKETAF-----------PIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDL  492 (775)
T ss_pred             ccEEEEecCCceEEEecCCCcccccc-----------cceehhhHHHHhhcccccceEecCCCceEEecccccceeeecc
Confidence             5889999999999999976221110           0000011234567889999999999999999999999999999


Q ss_pred             CCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCC
Q psy7108         183 REGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPT  262 (703)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spd  262 (703)
                      +..+...++.+|..        .|.++.|+|..+.+++++++      .+|+||.+.+..++.++.+|...|..+.|-.+
T Consensus       493 e~~~l~~vLsGH~R--------Gvw~V~Fs~~dq~laT~SgD------~TvKIW~is~fSClkT~eGH~~aVlra~F~~~  558 (775)
T KOG0319|consen  493 EQLRLLGVLSGHTR--------GVWCVSFSKNDQLLATCSGD------KTVKIWSISTFSCLKTFEGHTSAVLRASFIRN  558 (775)
T ss_pred             cCceEEEEeeCCcc--------ceEEEEeccccceeEeccCC------ceEEEEEeccceeeeeecCccceeEeeeeeeC
Confidence            98888888876655        89999999999999988876      49999999999999999999999999999999


Q ss_pred             CCEEEEEeCCC-EEEEEcCCCceeccee------eeEEEccchhhhHhhcCCcceEEEEEEecCc
Q psy7108         263 GQAWVAATTEG-VHIYSLDSGYVFDPFL------LDISITPQSVKEALADKDYAKALMMSLKLNE  320 (703)
Q Consensus       263 g~~l~s~s~Dg-v~iwd~~~~~~~~~~~------~~~~~spd~~~~~l~sg~~~~~l~la~~l~~  320 (703)
                      |+.|++++.|| +++|++.++.+...+.      +.++.+|..  ..+.+|+.|+.+.+ |.=..
T Consensus       559 ~~qliS~~adGliKlWnikt~eC~~tlD~H~DrvWaL~~~~~~--~~~~tgg~Dg~i~~-wkD~T  620 (775)
T KOG0319|consen  559 GKQLISAGADGLIKLWNIKTNECEMTLDAHNDRVWALSVSPLL--DMFVTGGGDGRIIF-WKDVT  620 (775)
T ss_pred             CcEEEeccCCCcEEEEeccchhhhhhhhhccceeEEEeecCcc--ceeEecCCCeEEEE-eecCc
Confidence            99999999999 9999999999876654      678888888  78899999999998 76443

>KOG0265|consensus

Probab=99.94  E-value=1.5e-25  Score=214.43  Aligned_cols=258  Identities=16%  Similarity=0.215  Sum_probs=212.1

Q ss_pred             eecccCCceEEecCCceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCC
Q psy7108          13 RETHEGGNVVLKLPGVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLS   92 (703)
Q Consensus        13 ~~~~~~~~~~i~~~~v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~   92 (703)
                      +++..|.+..|-+|++.     |.+-...+++||.++|..+.|.+  |++.|+++|.|++++.||++++++......|.+
T Consensus        61 ~~aSgG~Dr~I~LWnv~-----gdceN~~~lkgHsgAVM~l~~~~--d~s~i~S~gtDk~v~~wD~~tG~~~rk~k~h~~  133 (338)
T KOG0265|consen   61 CFASGGSDRAIVLWNVY-----GDCENFWVLKGHSGAVMELHGMR--DGSHILSCGTDKTVRGWDAETGKRIRKHKGHTS  133 (338)
T ss_pred             eEeecCCcceEEEEecc-----ccccceeeeccccceeEeeeecc--CCCEEEEecCCceEEEEecccceeeehhccccc
Confidence            34445555555555544     44444467889999999999999  999999999999999999999999999999999


Q ss_pred             cEEEEEEecCCC-EEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEE
Q psy7108          93 DALCVAYKPDGT-EIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAA  171 (703)
Q Consensus        93 ~V~~v~~spdg~-~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~  171 (703)
                      -|.++.-+.-|. ++.+++.|+++++||+++...+++++...                     .+++++|..++..+.+|
T Consensus       134 ~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~ky---------------------qltAv~f~d~s~qv~sg  192 (338)
T KOG0265|consen  134 FVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENKY---------------------QLTAVGFKDTSDQVISG  192 (338)
T ss_pred             eeeecCccccCCeEEEecCCCceEEEEeecccchhhccccce---------------------eEEEEEecccccceeec
Confidence            999998665564 56788899999999999999888886654                     68999999999999999


Q ss_pred             ecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCc----cceee
Q psy7108         172 GQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGD----MAARV  247 (703)
Q Consensus       172 s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~----~~~~~  247 (703)
                      +-|+.|++||++.+....++.+|.        +.|+.+..+++|.++...+-+      .++++||++...    ++..+
T Consensus       193 gIdn~ikvWd~r~~d~~~~lsGh~--------DtIt~lsls~~gs~llsnsMd------~tvrvwd~rp~~p~~R~v~if  258 (338)
T KOG0265|consen  193 GIDNDIKVWDLRKNDGLYTLSGHA--------DTITGLSLSRYGSFLLSNSMD------NTVRVWDVRPFAPSQRCVKIF  258 (338)
T ss_pred             cccCceeeeccccCcceEEeeccc--------CceeeEEeccCCCcccccccc------ceEEEEEecccCCCCceEEEe
Confidence            999999999999999888877554        599999999999998876655      589999998653    34555


Q ss_pred             cCCc----cceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecce------eeeEEEccchhhhHhhcCCcceEEEE
Q psy7108         248 LKPE----VRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPF------LLDISITPQSVKEALADKDYAKALMM  314 (703)
Q Consensus       248 ~~h~----~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~------~~~~~~spd~~~~~l~sg~~~~~l~l  314 (703)
                      .+|.    .....++|+|+++.+.+|+.|. +++||..+...+-.+      +..++|+|..  .++.+++.|+++-+
T Consensus       259 ~g~~hnfeknlL~cswsp~~~~i~ags~dr~vyvwd~~~r~~lyklpGh~gsvn~~~Fhp~e--~iils~~sdk~i~l  334 (338)
T KOG0265|consen  259 QGHIHNFEKNLLKCSWSPNGTKITAGSADRFVYVWDTTSRRILYKLPGHYGSVNEVDFHPTE--PIILSCSSDKTIYL  334 (338)
T ss_pred             ecchhhhhhhcceeeccCCCCccccccccceEEEeecccccEEEEcCCcceeEEEeeecCCC--cEEEEeccCceeEe
Confidence            5542    3356789999999999999999 999998875553332      3678999988  88888888888876

>KOG0284|consensus

Probab=99.94  E-value=1.5e-26  Score=229.34  Aligned_cols=236  Identities=13%  Similarity=0.206  Sum_probs=195.8

Q ss_pred             eeEEeeecccCCceEEecCC---ceeeccCCCccccccccCCC-cCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCce
Q psy7108           8 SLIETRETHEGGNVVLKLPG---VKKGDMAARVLKPEVLSGHE-GPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDT   83 (703)
Q Consensus         8 ~~~~~~~~~~~~~~~i~~~~---v~~~d~tg~~~~~~~l~gH~-~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~   83 (703)
                      +.+++..-...+.+.|.--.   ++.|+.+-..+  ..+.+|. ..|++++|+|  +...++|||+||+|+|||.....+
T Consensus       139 s~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnnV--k~~~ahh~eaIRdlafSp--nDskF~t~SdDg~ikiWdf~~~ke  214 (464)
T KOG0284|consen  139 SPVRTMKWSHNGTWMISGDKGGMIKYWQPNMNNV--KIIQAHHAEAIRDLAFSP--NDSKFLTCSDDGTIKIWDFRMPKE  214 (464)
T ss_pred             ccceeEEEccCCCEEEEcCCCceEEecccchhhh--HHhhHhhhhhhheeccCC--CCceeEEecCCCeEEEEeccCCch
Confidence            34444443344444444332   66777666666  6777665 9999999999  889999999999999999988877


Q ss_pred             eEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC
Q psy7108          84 QHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA  163 (703)
Q Consensus        84 ~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp  163 (703)
                      ...+.+|.-.|.+++|+|....||+++.|..|++||.++++++.++.+|+.                    .|..+.|+|
T Consensus       215 e~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tlh~HKn--------------------tVl~~~f~~  274 (464)
T KOG0284|consen  215 ERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATLHGHKN--------------------TVLAVKFNP  274 (464)
T ss_pred             hheeccCCCCcceeccCCccceeEEccCCceeEeecCCCcchhhhhhhccc--------------------eEEEEEEcC
Confidence            778888999999999999999999999999999999999999999998876                    899999999


Q ss_pred             CCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcc
Q psy7108         164 DGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDM  243 (703)
Q Consensus       164 dg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~  243 (703)
                      ++++|+++|.|..++++|+++.+.+.++++|.        ..++++.|+|-...++++++.+     ..|..|.+...++
T Consensus       275 n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hk--------kdv~~~~WhP~~~~lftsgg~D-----gsvvh~~v~~~~p  341 (464)
T KOG0284|consen  275 NGNWLLTGSKDQSCKVFDIRTMKELFTYRGHK--------KDVTSLTWHPLNESLFTSGGSD-----GSVVHWVVGLEEP  341 (464)
T ss_pred             CCCeeEEccCCceEEEEehhHhHHHHHhhcch--------hhheeeccccccccceeeccCC-----CceEEEecccccc
Confidence            99999999999999999999877777766554        4899999999988777765442     3688888774444


Q ss_pred             ceee-cCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcC
Q psy7108         244 AARV-LKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLD  280 (703)
Q Consensus       244 ~~~~-~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~  280 (703)
                      +..+ .+|+..|++++|+|-|..||+|+.|. +++|...
T Consensus       342 ~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r~  380 (464)
T KOG0284|consen  342 LGEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTRN  380 (464)
T ss_pred             ccCCCcccccceeeeeccccceeEeecCCCcceeeeccC
Confidence            4443 46999999999999999999999999 9999753

>KOG0316|consensus

Probab=99.94  E-value=2.6e-25  Score=205.72  Aligned_cols=244  Identities=17%  Similarity=0.252  Sum_probs=203.9

Q ss_pred             cCCceEEecCCceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEE
Q psy7108          17 EGGNVVLKLPGVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALC   96 (703)
Q Consensus        17 ~~~~~~i~~~~v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~   96 (703)
                      +|++..+++|++.    .|.++  +++.||...|..++.+.  |+..+++|+.|+.+.+||+.+++..+.+.+|.+.|+.
T Consensus        35 cGsdrtvrLWNp~----rg~li--ktYsghG~EVlD~~~s~--Dnskf~s~GgDk~v~vwDV~TGkv~Rr~rgH~aqVNt  106 (307)
T KOG0316|consen   35 CGSDRTVRLWNPL----RGALI--KTYSGHGHEVLDAALSS--DNSKFASCGGDKAVQVWDVNTGKVDRRFRGHLAQVNT  106 (307)
T ss_pred             cCCCceEEeeccc----cccee--eeecCCCceeeeccccc--cccccccCCCCceEEEEEcccCeeeeecccccceeeE
Confidence            3444555666555    89999  99999999999999999  9999999999999999999999999999999999999


Q ss_pred             EEEecCCCEEEEEECCCeEEEEEcCCC--cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC
Q psy7108          97 VAYKPDGTEIVVATLDGQLIMFDVESA--AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS  174 (703)
Q Consensus        97 v~~spdg~~las~s~dg~I~vwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d  174 (703)
                      ++|+.+...+++|+.|.++++||.++.  ++++.+....+                    .|.++..+  +..|++|+.|
T Consensus       107 V~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D--------------------~V~Si~v~--~heIvaGS~D  164 (307)
T KOG0316|consen  107 VRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKD--------------------GVSSIDVA--EHEIVAGSVD  164 (307)
T ss_pred             EEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcC--------------------ceeEEEec--ccEEEeeccC
Confidence            999999999999999999999999764  56777766655                    78888876  5679999999


Q ss_pred             CcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccce
Q psy7108         175 KYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRV  254 (703)
Q Consensus       175 g~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V  254 (703)
                      |+++.||++.|+....+          ...+|++++|++|++..++++-++      ++++.|-.+|+.+....+|...=
T Consensus       165 GtvRtydiR~G~l~sDy----------~g~pit~vs~s~d~nc~La~~l~s------tlrLlDk~tGklL~sYkGhkn~e  228 (307)
T KOG0316|consen  165 GTVRTYDIRKGTLSSDY----------FGHPITSVSFSKDGNCSLASSLDS------TLRLLDKETGKLLKSYKGHKNME  228 (307)
T ss_pred             CcEEEEEeecceeehhh----------cCCcceeEEecCCCCEEEEeeccc------eeeecccchhHHHHHhcccccce
Confidence            99999999999765443          334899999999999999988764      89999999999999999987653


Q ss_pred             --EEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecce-------eeeEEEccchhhhHhhcC
Q psy7108         255 --FCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPF-------LLDISITPQSVKEALADK  306 (703)
Q Consensus       255 --~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~-------~~~~~~spd~~~~~l~sg  306 (703)
                        ...+++.....+++|++|| |.+||+.....+..+       ..+++++|.....+.+.+
T Consensus       229 ykldc~l~qsdthV~sgSEDG~Vy~wdLvd~~~~sk~~~~~~v~v~dl~~hp~~~~f~~A~~  290 (307)
T KOG0316|consen  229 YKLDCCLNQSDTHVFSGSEDGKVYFWDLVDETQISKLSVVSTVIVTDLSCHPTMDDFITATG  290 (307)
T ss_pred             eeeeeeecccceeEEeccCCceEEEEEeccceeeeeeccCCceeEEeeecccCccceeEecC
Confidence              3456777788999999999 999999887765443       356777776633333333

>KOG0316|consensus

Probab=99.93  E-value=2.2e-25  Score=206.22  Aligned_cols=243  Identities=14%  Similarity=0.247  Sum_probs=207.5

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEc
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDV  120 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~  120 (703)
                      +++.+|.++|.++.|+-  +|++.++|+.|++||+|+...+..+....+|...|..++.+.|+..+++|+.|+.|.+||+
T Consensus        11 ~~l~~~qgaV~avryN~--dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV   88 (307)
T KOG0316|consen   11 SILDCAQGAVRAVRYNV--DGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDV   88 (307)
T ss_pred             eeecccccceEEEEEcc--CCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEEc
Confidence            67899999999999999  9999999999999999999999888888899999999999999999999999999999999


Q ss_pred             CCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCC--ceEEEEEeccCCc
Q psy7108         121 ESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREG--ILLKKFTITQNKS  198 (703)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~--~~~~~~~~~~~~~  198 (703)
                      .+|+..+.+.+|..                    .|+.+.|+.+...+++|+-|.++++||.++.  ++++.+..     
T Consensus        89 ~TGkv~Rr~rgH~a--------------------qVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQilde-----  143 (307)
T KOG0316|consen   89 NTGKVDRRFRGHLA--------------------QVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDE-----  143 (307)
T ss_pred             ccCeeeeecccccc--------------------eeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhh-----
Confidence            99999999999875                    8999999999999999999999999999875  44444432     


Q ss_pred             cccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEE
Q psy7108         199 LDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIY  277 (703)
Q Consensus       199 ~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iw  277 (703)
                         ..+.|.++..+  +.-++.++.+|      +++.||++.|+......+|  +|++++|++|++..++++-|+ +++.
T Consensus       144 ---a~D~V~Si~v~--~heIvaGS~DG------tvRtydiR~G~l~sDy~g~--pit~vs~s~d~nc~La~~l~stlrLl  210 (307)
T KOG0316|consen  144 ---AKDGVSSIDVA--EHEIVAGSVDG------TVRTYDIRKGTLSSDYFGH--PITSVSFSKDGNCSLASSLDSTLRLL  210 (307)
T ss_pred             ---hcCceeEEEec--ccEEEeeccCC------cEEEEEeecceeehhhcCC--cceeEEecCCCCEEEEeeccceeeec
Confidence               22356666665  44566666654      8999999999876655554  699999999999999999999 9999


Q ss_pred             EcCCCceecce--------eeeEEEccchhhhHhhcCCcceEEEEEEecCchhHHHH
Q psy7108         278 SLDSGYVFDPF--------LLDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIH  326 (703)
Q Consensus       278 d~~~~~~~~~~--------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~~~~~~  326 (703)
                      |-.+|+.+..+        ..+.+++...  ..+.+|+.|+.+-+ |+|-+..++.+
T Consensus       211 Dk~tGklL~sYkGhkn~eykldc~l~qsd--thV~sgSEDG~Vy~-wdLvd~~~~sk  264 (307)
T KOG0316|consen  211 DKETGKLLKSYKGHKNMEYKLDCCLNQSD--THVFSGSEDGKVYF-WDLVDETQISK  264 (307)
T ss_pred             ccchhHHHHHhcccccceeeeeeeecccc--eeEEeccCCceEEE-EEeccceeeee
Confidence            99999886554        3566676666  78899999999998 99887655544

>KOG0273|consensus

Probab=99.93  E-value=6.5e-25  Score=221.46  Aligned_cols=236  Identities=16%  Similarity=0.279  Sum_probs=209.2

Q ss_pred             cCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEE
Q psy7108          48 GPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVG  127 (703)
Q Consensus        48 ~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~  127 (703)
                      ..|++++|+.  +|+.||+|+.||.+|+|+. ++.....+-.|+++|.++.|+.+|.+|++++.|+++.+||..+++...
T Consensus       236 kdVT~L~Wn~--~G~~LatG~~~G~~riw~~-~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q  312 (524)
T KOG0273|consen  236 KDVTSLDWNN--DGTLLATGSEDGEARIWNK-DGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQ  312 (524)
T ss_pred             CCcceEEecC--CCCeEEEeecCcEEEEEec-CchhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEE
Confidence            6799999999  9999999999999999997 444667777899999999999999999999999999999999999999


Q ss_pred             EEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccce
Q psy7108         128 SVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFIN  207 (703)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~  207 (703)
                      .++.|..                    +-..+.|-.+ ..+++++.|+.|+++-+....++.++.+|.+        .|+
T Consensus       313 ~f~~~s~--------------------~~lDVdW~~~-~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g--------~V~  363 (524)
T KOG0273|consen  313 QFEFHSA--------------------PALDVDWQSN-DEFATSSTDGCIHVCKVGEDRPVKTFIGHHG--------EVN  363 (524)
T ss_pred             eeeeccC--------------------CccceEEecC-ceEeecCCCceEEEEEecCCCcceeeecccC--------ceE
Confidence            8888764                    4456888754 4588999999999999999999999988776        999


Q ss_pred             eeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCC---------CEEEEEeCCC-EEEE
Q psy7108         208 RRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTG---------QAWVAATTEG-VHIY  277 (703)
Q Consensus       208 ~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg---------~~l~s~s~Dg-v~iw  277 (703)
                      .+.|.|.|..+++++.++      +++||......+...+..|...|..+.|+|+|         ..+++++.|+ |++|
T Consensus       364 alk~n~tg~LLaS~SdD~------TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lw  437 (524)
T KOG0273|consen  364 ALKWNPTGSLLASCSDDG------TLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLW  437 (524)
T ss_pred             EEEECCCCceEEEecCCC------eeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEE
Confidence            999999999999888764      99999999998999999999999999999975         4689999999 9999


Q ss_pred             EcCCCceecce------eeeEEEccchhhhHhhcCCcceEEEEEEecCchhHH
Q psy7108         278 SLDSGYVFDPF------LLDISITPQSVKEALADKDYAKALMMSLKLNEQGLI  324 (703)
Q Consensus       278 d~~~~~~~~~~------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~~~~  324 (703)
                      |+..+.++..+      +.+++|+|++  .++++|+.++.+.+ |......+.
T Consensus       438 dv~~gv~i~~f~kH~~pVysvafS~~g--~ylAsGs~dg~V~i-ws~~~~~l~  487 (524)
T KOG0273|consen  438 DVESGVPIHTLMKHQEPVYSVAFSPNG--RYLASGSLDGCVHI-WSTKTGKLV  487 (524)
T ss_pred             EccCCceeEeeccCCCceEEEEecCCC--cEEEecCCCCeeEe-ccccchhee
Confidence            99999886555      5789999999  99999999999998 877655433

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=99.93  E-value=9.6e-24  Score=216.08  Aligned_cols=248  Identities=23%  Similarity=0.378  Sum_probs=210.5

Q ss_pred             ceeecc-CCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEE
Q psy7108          28 VKKGDM-AARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEI  106 (703)
Q Consensus        28 v~~~d~-tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~l  106 (703)
                      +.+|+. +++..  ..+.+|...+.++.|+|  +++.+++++.||.+++|++.+++.......|...+.+++|+|+++.+
T Consensus        33 i~i~~~~~~~~~--~~~~~~~~~i~~~~~~~--~~~~l~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  108 (289)
T cd00200          33 IKVWDLETGELL--RTLKGHTGPVRDVAASA--DGTYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRIL  108 (289)
T ss_pred             EEEEEeeCCCcE--EEEecCCcceeEEEECC--CCCEEEEEcCCCeEEEEEcCcccceEEEeccCCcEEEEEEcCCCCEE
Confidence            455553 45556  77889999999999999  88999999999999999998876777777888899999999998888


Q ss_pred             EEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCc
Q psy7108         107 VVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGI  186 (703)
Q Consensus       107 as~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~  186 (703)
                      ++++.|+.|.+||+++++....+..+..                    .+.+++|+|++.++++++.|+.|++||+++++
T Consensus       109 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~--------------------~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~  168 (289)
T cd00200         109 SSSSRDKTIKVWDVETGKCLTTLRGHTD--------------------WVNSVAFSPDGTFVASSSQDGTIKLWDLRTGK  168 (289)
T ss_pred             EEecCCCeEEEEECCCcEEEEEeccCCC--------------------cEEEEEEcCcCCEEEEEcCCCcEEEEEccccc
Confidence            8888899999999998888877776543                    79999999999988888889999999999888


Q ss_pred             eEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEE
Q psy7108         187 LLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAW  266 (703)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l  266 (703)
                      ....+..+.        ..+.++.|+|+++.+++++.++      .+++||.++++....+..|...+.+++|+|++.++
T Consensus       169 ~~~~~~~~~--------~~i~~~~~~~~~~~l~~~~~~~------~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  234 (289)
T cd00200         169 CVATLTGHT--------GEVNSVAFSPDGEKLLSSSSDG------TIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLL  234 (289)
T ss_pred             cceeEecCc--------cccceEEECCCcCEEEEecCCC------cEEEEECCCCceecchhhcCCceEEEEEcCCCcEE
Confidence            877776433        3789999999998888877643      79999999988888877888899999999998888


Q ss_pred             EEEeCCC-EEEEEcCCCceecce------eeeEEEccchhhhHhhcCCcceEEEEEE
Q psy7108         267 VAATTEG-VHIYSLDSGYVFDPF------LLDISITPQSVKEALADKDYAKALMMSL  316 (703)
Q Consensus       267 ~s~s~Dg-v~iwd~~~~~~~~~~------~~~~~~spd~~~~~l~sg~~~~~l~la~  316 (703)
                      ++++.|+ +++|++.+++....+      ...++|+|++  ..+.+++.++.+.+ |
T Consensus       235 ~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~l~~~~~d~~i~i-w  288 (289)
T cd00200         235 ASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDG--KRLASGSADGTIRI-W  288 (289)
T ss_pred             EEEcCCCcEEEEEcCCceeEEEccccCCcEEEEEECCCC--CEEEEecCCCeEEe-c
Confidence            8888788 999999877664333      3678999987  77888888888876 5

>KOG0292|consensus

Probab=99.93  E-value=4.7e-25  Score=236.54  Aligned_cols=255  Identities=14%  Similarity=0.192  Sum_probs=217.0

Q ss_pred             ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEE
Q psy7108          28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEI  106 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~l  106 (703)
                      ++.|| +-|.++  ..+..|.++|++++|+|  .+.+++||++|..|++|+..+..++..+.+|-+.|..+.|++.-.+|
T Consensus        33 IQlWDYRM~tli--~rFdeHdGpVRgv~FH~--~qplFVSGGDDykIkVWnYk~rrclftL~GHlDYVRt~~FHheyPWI  108 (1202)
T KOG0292|consen   33 IQLWDYRMGTLI--DRFDEHDGPVRGVDFHP--TQPLFVSGGDDYKIKVWNYKTRRCLFTLLGHLDYVRTVFFHHEYPWI  108 (1202)
T ss_pred             eeeehhhhhhHH--hhhhccCCccceeeecC--CCCeEEecCCccEEEEEecccceehhhhccccceeEEeeccCCCceE
Confidence            45556 468888  99999999999999999  99999999999999999999999999999999999999999999999


Q ss_pred             EEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCc
Q psy7108         107 VVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGI  186 (703)
Q Consensus       107 as~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~  186 (703)
                      +++|.|.+|+||+..+++++..+.+|..                    .|.|..|+|....++++|-|.+|++||+..-+
T Consensus       109 lSASDDQTIrIWNwqsr~~iavltGHnH--------------------YVMcAqFhptEDlIVSaSLDQTVRVWDisGLR  168 (1202)
T KOG0292|consen  109 LSASDDQTIRIWNWQSRKCIAVLTGHNH--------------------YVMCAQFHPTEDLIVSASLDQTVRVWDISGLR  168 (1202)
T ss_pred             EEccCCCeEEEEeccCCceEEEEecCce--------------------EEEeeccCCccceEEEecccceEEEEeecchh
Confidence            9999999999999999999999999876                    89999999999999999999999999986421


Q ss_pred             eEEE--------EE-------------eccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCc--c
Q psy7108         187 LLKK--------FT-------------ITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGD--M  243 (703)
Q Consensus       187 ~~~~--------~~-------------~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~--~  243 (703)
                      ....        +.             .-....++||...|+-++|+|.-..+++++.+      +.|++|.....+  .
T Consensus       169 kk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DD------RqVKlWrmnetKaWE  242 (1202)
T KOG0292|consen  169 KKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADD------RQVKLWRMNETKAWE  242 (1202)
T ss_pred             ccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCc------ceeeEEEecccccee
Confidence            1100        00             00123567889999999999999887776654      689999765432  3


Q ss_pred             ceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceeccee------eeEEEccchhhhHhhcCCcceEEEE
Q psy7108         244 AARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPFL------LDISITPQSVKEALADKDYAKALMM  314 (703)
Q Consensus       244 ~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~~------~~~~~spd~~~~~l~sg~~~~~l~l  314 (703)
                      +.+..+|.+.|.++-|+|..+.+++.|+|+ ++|||+...+.++.+.      +.++.+|..  +++++|-..+.+.+
T Consensus       243 vDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~tfrrendRFW~laahP~l--NLfAAgHDsGm~VF  318 (1202)
T KOG0292|consen  243 VDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTFRRENDRFWILAAHPEL--NLFAAGHDSGMIVF  318 (1202)
T ss_pred             ehhhhcccCCcceEEecCccceeEecCCCccEEEEecccccceeeeeccCCeEEEEEecCCc--ceeeeecCCceEEE
Confidence            456678999999999999999999999999 9999999888887774      458888988  88888876666554

>KOG0282|consensus

Probab=99.93  E-value=6.3e-26  Score=229.73  Aligned_cols=262  Identities=18%  Similarity=0.288  Sum_probs=212.4

Q ss_pred             eeecccCCceEEecCCceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCC
Q psy7108          12 TRETHEGGNVVLKLPGVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLL   91 (703)
Q Consensus        12 ~~~~~~~~~~~i~~~~v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~   91 (703)
                      -++.+.|-++.|.+|++.  + .++++  +++.||..+|.+++|++  +|..+.|+|.|+.+++||+++|++ ...+...
T Consensus       228 hLlLS~gmD~~vklW~vy--~-~~~~l--rtf~gH~k~Vrd~~~s~--~g~~fLS~sfD~~lKlwDtETG~~-~~~f~~~  299 (503)
T KOG0282|consen  228 HLLLSGGMDGLVKLWNVY--D-DRRCL--RTFKGHRKPVRDASFNN--CGTSFLSASFDRFLKLWDTETGQV-LSRFHLD  299 (503)
T ss_pred             eEEEecCCCceEEEEEEe--c-Cccee--hhhhcchhhhhhhhccc--cCCeeeeeecceeeeeeccccceE-EEEEecC
Confidence            355677888888888776  2 68999  99999999999999999  999999999999999999999954 4455566


Q ss_pred             CcEEEEEEecCC-CEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEE
Q psy7108          92 SDALCVAYKPDG-TEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILA  170 (703)
Q Consensus        92 ~~V~~v~~spdg-~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s  170 (703)
                      ..++|+.|.||+ +.+++|+.|+.|+.||+++++.++.+..|-.                    .|..+.|-++|+.+++
T Consensus       300 ~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg--------------------~i~~i~F~~~g~rFis  359 (503)
T KOG0282|consen  300 KVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLG--------------------AILDITFVDEGRRFIS  359 (503)
T ss_pred             CCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhh--------------------heeeeEEccCCceEee
Confidence            788999999999 7889999999999999999998887777654                    8999999999999999


Q ss_pred             EecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC---ccceee
Q psy7108         171 AGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG---DMAARV  247 (703)
Q Consensus       171 ~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~---~~~~~~  247 (703)
                      ++.|+++++|+.+....++....+..       -...++..+|.+++++.-+.+      +.+.++.+...   .....+
T Consensus       360 sSDdks~riWe~~~~v~ik~i~~~~~-------hsmP~~~~~P~~~~~~aQs~d------N~i~ifs~~~~~r~nkkK~f  426 (503)
T KOG0282|consen  360 SSDDKSVRIWENRIPVPIKNIADPEM-------HTMPCLTLHPNGKWFAAQSMD------NYIAIFSTVPPFRLNKKKRF  426 (503)
T ss_pred             eccCccEEEEEcCCCccchhhcchhh-------ccCcceecCCCCCeehhhccC------ceEEEEecccccccCHhhhh
Confidence            99999999999998876654432211       245678999999998876654      36777754322   233455


Q ss_pred             cCCc--cceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecc------eeeeEEEccchhhhHhhcCCcceEEEEEE
Q psy7108         248 LKPE--VRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDP------FLLDISITPQSVKEALADKDYAKALMMSL  316 (703)
Q Consensus       248 ~~h~--~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~------~~~~~~~spd~~~~~l~sg~~~~~l~la~  316 (703)
                      .+|.  +--..+.|||||++|++|+.|| +.+||..+.+.+..      ....+.|+|... .-++++++++.|.+ |
T Consensus       427 eGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~~lkah~~~ci~v~wHP~e~-Skvat~~w~G~Iki-w  502 (503)
T KOG0282|consen  427 EGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTTKLVSKLKAHDQPCIGVDWHPVEP-SKVATCGWDGLIKI-W  502 (503)
T ss_pred             cceeccCceeeEEEcCCCCeEEeecCCccEEEeechhhhhhhccccCCcceEEEEecCCCc-ceeEecccCceeEe-c
Confidence            6664  3456789999999999999999 99999887766443      346789999763 45788889999887 5

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=99.93  E-value=8e-24  Score=216.66  Aligned_cols=241  Identities=22%  Similarity=0.390  Sum_probs=208.0

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEc
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDV  120 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~  120 (703)
                      +++.+|.++|++++|+|  ++++|++++.||.+++|++.+++.......|...+.++.|+|+++.+++++.|+.|++||+
T Consensus         3 ~~~~~h~~~i~~~~~~~--~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~   80 (289)
T cd00200           3 RTLKGHTGGVTCVAFSP--DGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDL   80 (289)
T ss_pred             hHhcccCCCEEEEEEcC--CCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEc
Confidence            67889999999999999  9999999999999999999888766777778889999999999999999999999999999


Q ss_pred             CCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccc
Q psy7108         121 ESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLD  200 (703)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~  200 (703)
                      ++++....+..+..                    .+.+++|+|+++++++++.|+.|.+||+++++....+..+      
T Consensus        81 ~~~~~~~~~~~~~~--------------------~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~------  134 (289)
T cd00200          81 ETGECVRTLTGHTS--------------------YVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGH------  134 (289)
T ss_pred             CcccceEEEeccCC--------------------cEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccC------
Confidence            98877777776553                    7999999999888888888999999999988877776533      


Q ss_pred             cccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEc
Q psy7108         201 GINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSL  279 (703)
Q Consensus       201 ~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~  279 (703)
                        ...+.+++++|++..+++++.+      ..+++||+++++....+..|...+.+++|+|+++.+++++.++ +++|++
T Consensus       135 --~~~i~~~~~~~~~~~l~~~~~~------~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~  206 (289)
T cd00200         135 --TDWVNSVAFSPDGTFVASSSQD------GTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDL  206 (289)
T ss_pred             --CCcEEEEEEcCcCCEEEEEcCC------CcEEEEEccccccceeEecCccccceEEECCCcCEEEEecCCCcEEEEEC
Confidence              3478999999998887776634      3799999998888888888988999999999999999999899 999999


Q ss_pred             CCCceecce------eeeEEEccchhhhHhhcCCcceEEEEEEecCc
Q psy7108         280 DSGYVFDPF------LLDISITPQSVKEALADKDYAKALMMSLKLNE  320 (703)
Q Consensus       280 ~~~~~~~~~------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~  320 (703)
                      .+++....+      ...+.++|++  .++..++.++.+.+ |++..
T Consensus       207 ~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~i~i-~~~~~  250 (289)
T cd00200         207 STGKCLGTLRGHENGVNSVAFSPDG--YLLASGSEDGTIRV-WDLRT  250 (289)
T ss_pred             CCCceecchhhcCCceEEEEEcCCC--cEEEEEcCCCcEEE-EEcCC
Confidence            887765444      3568899986  77777777888887 87764

>KOG0973|consensus

Probab=99.93  E-value=1.4e-24  Score=239.94  Aligned_cols=282  Identities=16%  Similarity=0.257  Sum_probs=227.6

Q ss_pred             eeecccC--CceEEecCCcee-------eccC-CCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCC-
Q psy7108          12 TRETHEG--GNVVLKLPGVKK-------GDMA-ARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVE-   80 (703)
Q Consensus        12 ~~~~~~~--~~~~i~~~~v~~-------~d~t-g~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~-   80 (703)
                      ++|+..|  .++-+++|+..-       ++.+ .+.+  .+...|.+.|+|+.|+|  ||.+||+||+|+.|.||.... 
T Consensus        26 ~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l--~~m~~h~~sv~CVR~S~--dG~~lAsGSDD~~v~iW~~~~~  101 (942)
T KOG0973|consen   26 VKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHL--CTMDDHDGSVNCVRFSP--DGSYLASGSDDRLVMIWERAEI  101 (942)
T ss_pred             eeEecCCccccccceeeccccccchhhhhhcccchhh--eeeccccCceeEEEECC--CCCeEeeccCcceEEEeeeccc
Confidence            4555555  555566787433       2222 3444  67788999999999999  999999999999999998762 


Q ss_pred             ---------C--------ceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCc
Q psy7108          81 ---------T--------DTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTD  143 (703)
Q Consensus        81 ---------~--------~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~  143 (703)
                               +        +....+.+|.+.|..++|+|++.++|+++.|++|.+|+..+.+.+..+++|..         
T Consensus       102 ~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~vl~~H~s---------  172 (942)
T KOG0973|consen  102 GSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLKVLRGHQS---------  172 (942)
T ss_pred             CCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccceeeeeeecccc---------
Confidence                     0        13445567999999999999999999999999999999999999999999876         


Q ss_pred             cchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcc
Q psy7108         144 LVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETR  223 (703)
Q Consensus       144 ~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~  223 (703)
                                 .|..+.|.|-|++|++-+.|++|++|++.+..+.+.+..+....  .....+..+.|||||+++++...
T Consensus       173 -----------~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~--~~~T~f~RlSWSPDG~~las~nA  239 (942)
T KOG0973|consen  173 -----------LVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEES--PLTTFFLRLSWSPDGHHLASPNA  239 (942)
T ss_pred             -----------cccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhC--CCcceeeecccCCCcCeecchhh
Confidence                       78899999999999999999999999988877777776554422  23357889999999999988765


Q ss_pred             cCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCC-------------CC----EEEEEeCCC-EEEEEcCCCcee
Q psy7108         224 ETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPT-------------GQ----AWVAATTEG-VHIYSLDSGYVF  285 (703)
Q Consensus       224 ~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spd-------------g~----~l~s~s~Dg-v~iwd~~~~~~~  285 (703)
                      -  .++...+.|.+..+++.-..+.+|..++.++.|+|.             .+    .+|+|+.|+ +.||.....+++
T Consensus       240 ~--n~~~~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl  317 (942)
T KOG0973|consen  240 V--NGGKSTIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPL  317 (942)
T ss_pred             c--cCCcceeEEEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCch
Confidence            4  344568899998888888899999999999999982             11    568999999 999998655542


Q ss_pred             -------cceeeeEEEccchhhhHhhcCCcceEEEEEEecCchhHH
Q psy7108         286 -------DPFLLDISITPQSVKEALADKDYAKALMMSLKLNEQGLI  324 (703)
Q Consensus       286 -------~~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~~~~  324 (703)
                             ..-..+++|+|||  ..|..++.|+++.+ +...+.++-
T Consensus       318 ~vi~~lf~~SI~DmsWspdG--~~LfacS~DGtV~~-i~Fee~ElG  360 (942)
T KOG0973|consen  318 FVIHNLFNKSIVDMSWSPDG--FSLFACSLDGTVAL-IHFEEKELG  360 (942)
T ss_pred             hhhhhhhcCceeeeeEcCCC--CeEEEEecCCeEEE-EEcchHHhC
Confidence                   2334789999999  77889999999988 777655433

>PTZ00421 coronin; Provisional

Probab=99.93  E-value=2.6e-23  Score=227.53  Aligned_cols=215  Identities=18%  Similarity=0.239  Sum_probs=173.1

Q ss_pred             cccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc-------eeEEEecCCCcEEEEEEecCC-CEEEEEECCC
Q psy7108          42 VLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD-------TQHETIQLLSDALCVAYKPDG-TEIVVATLDG  113 (703)
Q Consensus        42 ~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~-------~~~~~~~~~~~V~~v~~spdg-~~las~s~dg  113 (703)
                      .+.||.+.|++++|+|. ++++|++|+.|++|++||+.++.       ....+..|...|.+++|+|++ ..|++++.|+
T Consensus        70 ~l~GH~~~V~~v~fsP~-d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~Dg  148 (493)
T PTZ00421         70 ILLGQEGPIIDVAFNPF-DPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADM  148 (493)
T ss_pred             eEeCCCCCEEEEEEcCC-CCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCC
Confidence            57899999999999995 67899999999999999997652       244566799999999999986 6899999999


Q ss_pred             eEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEe
Q psy7108         114 QLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTI  193 (703)
Q Consensus       114 ~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~  193 (703)
                      +|++||+++++.+..+.+|..                    .|.+++|+|+|+.|++++.|++|++||+++++.+..+..
T Consensus       149 tVrIWDl~tg~~~~~l~~h~~--------------------~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~  208 (493)
T PTZ00421        149 VVNVWDVERGKAVEVIKCHSD--------------------QITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEA  208 (493)
T ss_pred             EEEEEECCCCeEEEEEcCCCC--------------------ceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEec
Confidence            999999999998888877655                    899999999999999999999999999999998887766


Q ss_pred             ccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcc-ceeecC-CccceEEEEEcCCCCEEEEEe-
Q psy7108         194 TQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDM-AARVLK-PEVRVFCVKFSPTGQAWVAAT-  270 (703)
Q Consensus       194 ~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~-~~~~~~-h~~~V~~l~~spdg~~l~s~s-  270 (703)
                      |..       .....+.|.+++..+++.+...  ..++.|++||+++... ...... ....+....|+++++.+++++ 
T Consensus       209 H~~-------~~~~~~~w~~~~~~ivt~G~s~--s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggk  279 (493)
T PTZ00421        209 HAS-------AKSQRCLWAKRKDLIITLGCSK--SQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSK  279 (493)
T ss_pred             CCC-------CcceEEEEcCCCCeEEEEecCC--CCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEe
Confidence            543       1234677888888777655331  1225899999987643 322222 234466678999999998887 


Q ss_pred             CCC-EEEEEcCCCceec
Q psy7108         271 TEG-VHIYSLDSGYVFD  286 (703)
Q Consensus       271 ~Dg-v~iwd~~~~~~~~  286 (703)
                      .|+ |++|++.+++.+.
T Consensus       280 gDg~Iriwdl~~~~~~~  296 (493)
T PTZ00421        280 GEGNIRCFELMNERLTF  296 (493)
T ss_pred             CCCeEEEEEeeCCceEE
Confidence            488 9999999887643

>KOG0276|consensus

Probab=99.93  E-value=1.7e-24  Score=224.70  Aligned_cols=259  Identities=14%  Similarity=0.111  Sum_probs=213.2

Q ss_pred             ccCCceEEe-c--CCceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCC
Q psy7108          16 HEGGNVVLK-L--PGVKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLL   91 (703)
Q Consensus        16 ~~~~~~~i~-~--~~v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~   91 (703)
                      |...-|++. +  -++.+|+ .+...+  +.+.-..-||++..|-+  ..+++++|++|..|||++..+.+++..+..|.
T Consensus        22 HPtePw~la~LynG~V~IWnyetqtmV--ksfeV~~~PvRa~kfia--RknWiv~GsDD~~IrVfnynt~ekV~~FeAH~   97 (794)
T KOG0276|consen   22 HPTEPWILAALYNGDVQIWNYETQTMV--KSFEVSEVPVRAAKFIA--RKNWIVTGSDDMQIRVFNYNTGEKVKTFEAHS   97 (794)
T ss_pred             CCCCceEEEeeecCeeEEEecccceee--eeeeecccchhhheeee--ccceEEEecCCceEEEEecccceeeEEeeccc
Confidence            444444443 2  3377787 355555  78888889999999999  89999999999999999999999999999999


Q ss_pred             CcEEEEEEecCCCEEEEEECCCeEEEEEcCCC-cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC-CCCEEE
Q psy7108          92 SDALCVAYKPDGTEIVVATLDGQLIMFDVESA-AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA-DGSCIL  169 (703)
Q Consensus        92 ~~V~~v~~spdg~~las~s~dg~I~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp-dg~~l~  169 (703)
                      +.|+|++.+|...++++++.|-+|++||-+.. .+.+++++|..                    .|.+++|+| |.+.++
T Consensus        98 DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~H--------------------yVMqv~fnPkD~ntFa  157 (794)
T KOG0276|consen   98 DYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEH--------------------YVMQVAFNPKDPNTFA  157 (794)
T ss_pred             cceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcce--------------------EEEEEEecCCCcccee
Confidence            99999999999999999999999999999765 67788999876                    899999999 678999


Q ss_pred             EEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCC--CEEEEEcccCCCCCeeEEECCCCCCCccceee
Q psy7108         170 AAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFG--NVSLIETRETHEGGNVVLKLPGVKKGDMAARV  247 (703)
Q Consensus       170 s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg--~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~  247 (703)
                      +++-|++|++|.+.+..+..++++|..        .|+++.+-+-|  .++++++.+      .++++||..+..|++++
T Consensus       158 S~sLDrTVKVWslgs~~~nfTl~gHek--------GVN~Vdyy~~gdkpylIsgaDD------~tiKvWDyQtk~CV~TL  223 (794)
T KOG0276|consen  158 SASLDRTVKVWSLGSPHPNFTLEGHEK--------GVNCVDYYTGGDKPYLISGADD------LTIKVWDYQTKSCVQTL  223 (794)
T ss_pred             eeeccccEEEEEcCCCCCceeeecccc--------CcceEEeccCCCcceEEecCCC------ceEEEeecchHHHHHHh
Confidence            999999999999998888777765554        89999998766  466665544      69999999999999999


Q ss_pred             cCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceeccee------eeEEEccchhhhHhhcCCcceEEEE
Q psy7108         248 LKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPFL------LDISITPQSVKEALADKDYAKALMM  314 (703)
Q Consensus       248 ~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~~------~~~~~spd~~~~~l~sg~~~~~l~l  314 (703)
                      .+|...|..+.|+|.-..+++|++|| ++||+..+-+....+.      ++++-.+..  ..++.|...+.+.+
T Consensus       224 eGHt~Nvs~v~fhp~lpiiisgsEDGTvriWhs~Ty~lE~tLn~gleRvW~I~~~k~~--~~i~vG~Deg~i~v  295 (794)
T KOG0276|consen  224 EGHTNNVSFVFFHPELPIIISGSEDGTVRIWNSKTYKLEKTLNYGLERVWCIAAHKGD--GKIAVGFDEGSVTV  295 (794)
T ss_pred             hcccccceEEEecCCCcEEEEecCCccEEEecCcceehhhhhhcCCceEEEEeecCCC--CeEEEeccCCcEEE
Confidence            99999999999999999999999999 9999988766654442      344433443  33455554454444

>PTZ00420 coronin; Provisional

Probab=99.93  E-value=2.5e-23  Score=228.59  Aligned_cols=246  Identities=15%  Similarity=0.190  Sum_probs=179.8

Q ss_pred             ceEEecCCceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCce--------eEEEecCC
Q psy7108          20 NVVLKLPGVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDT--------QHETIQLL   91 (703)
Q Consensus        20 ~~~i~~~~v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~--------~~~~~~~~   91 (703)
                      ..++++|+..    ....+  ..+.+|.++|.+++|+|. ++++|+||+.||+|++||+.++..        ...+..|.
T Consensus        53 ~gvI~L~~~~----r~~~v--~~L~gH~~~V~~lafsP~-~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~  125 (568)
T PTZ00420         53 IGAIRLENQM----RKPPV--IKLKGHTSSILDLQFNPC-FSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHK  125 (568)
T ss_pred             eeEEEeeecC----CCceE--EEEcCCCCCEEEEEEcCC-CCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCC
Confidence            4455555432    23445  788999999999999992 378999999999999999976421        23455689


Q ss_pred             CcEEEEEEecCCCE-EEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEE
Q psy7108          92 SDALCVAYKPDGTE-IVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILA  170 (703)
Q Consensus        92 ~~V~~v~~spdg~~-las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s  170 (703)
                      ..|.+++|+|++.. +++++.|++|++||+++++....+..+ .                    .|.+++|+|+|++|++
T Consensus       126 ~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~~-~--------------------~V~SlswspdG~lLat  184 (568)
T PTZ00420        126 KKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINMP-K--------------------KLSSLKWNIKGNLLSG  184 (568)
T ss_pred             CcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEecC-C--------------------cEEEEEECCCCCEEEE
Confidence            99999999999875 578999999999999999877666432 2                    6999999999999999


Q ss_pred             EecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCC-Cccceeec-
Q psy7108         171 AGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKK-GDMAARVL-  248 (703)
Q Consensus       171 ~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~-~~~~~~~~-  248 (703)
                      ++.|+.|++||+++++.+.++.+|.+....   ..+....|++++.++++++.++  ...+.|++||+++ ++++.... 
T Consensus       185 ~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~s---~~v~~~~fs~d~~~IlTtG~d~--~~~R~VkLWDlr~~~~pl~~~~l  259 (568)
T PTZ00420        185 TCVGKHMHIIDPRKQEIASSFHIHDGGKNT---KNIWIDGLGGDDNYILSTGFSK--NNMREMKLWDLKNTTSALVTMSI  259 (568)
T ss_pred             EecCCEEEEEECCCCcEEEEEecccCCcee---EEEEeeeEcCCCCEEEEEEcCC--CCccEEEEEECCCCCCceEEEEe
Confidence            999999999999999998888766541100   1223345678988888877653  2235799999995 45554332 


Q ss_pred             -CCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCcee--cce-----eeeEEEccch
Q psy7108         249 -KPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVF--DPF-----LLDISITPQS  298 (703)
Q Consensus       249 -~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~--~~~-----~~~~~~spd~  298 (703)
                       .+.+.+......++|.++++|+.|+ |++|++..+...  ..+     ...++|.|+.
T Consensus       260 d~~~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~~~~~~~~l~~~~s~~p~~g~~f~Pkr  318 (568)
T PTZ00420        260 DNASAPLIPHYDESTGLIYLIGKGDGNCRYYQHSLGSIRKVNEYKSCSPFRSFGFLPKQ  318 (568)
T ss_pred             cCCccceEEeeeCCCCCEEEEEECCCeEEEEEccCCcEEeecccccCCCccceEEcccc
Confidence             2233333344455688899999999 999999776431  111     2457777754

>KOG0645|consensus

Probab=99.93  E-value=1.5e-23  Score=198.11  Aligned_cols=260  Identities=13%  Similarity=0.219  Sum_probs=201.1

Q ss_pred             eecccCCceEEecCCceeeccCCCccccccc-cCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc--eeEEEec
Q psy7108          13 RETHEGGNVVLKLPGVKKGDMAARVLKPEVL-SGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD--TQHETIQ   89 (703)
Q Consensus        13 ~~~~~~~~~~i~~~~v~~~d~tg~~~~~~~l-~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~--~~~~~~~   89 (703)
                      +++..|.+..+++|+....| +-.+.  .++ .+|+..|++++|+|  .|++|++||.|.++.||.-..++  ++..+-+
T Consensus        29 ilAscg~Dk~vriw~~~~~~-s~~ck--~vld~~hkrsVRsvAwsp--~g~~La~aSFD~t~~Iw~k~~~efecv~~lEG  103 (312)
T KOG0645|consen   29 ILASCGTDKAVRIWSTSSGD-SWTCK--TVLDDGHKRSVRSVAWSP--HGRYLASASFDATVVIWKKEDGEFECVATLEG  103 (312)
T ss_pred             EEEeecCCceEEEEecCCCC-cEEEE--EeccccchheeeeeeecC--CCcEEEEeeccceEEEeecCCCceeEEeeeec
Confidence            45556666666666655311 22343  344 57999999999999  99999999999999999865443  4566667


Q ss_pred             CCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCC---cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCC
Q psy7108          90 LLSDALCVAYKPDGTEIVVATLDGQLIMFDVESA---AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGS  166 (703)
Q Consensus        90 ~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~  166 (703)
                      |...|.|++|+++|.+||+|+.|+.|.||.+..+   ++...++.|..                    -|..+.|+|...
T Consensus       104 HEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~Htq--------------------DVK~V~WHPt~d  163 (312)
T KOG0645|consen  104 HENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQ--------------------DVKHVIWHPTED  163 (312)
T ss_pred             cccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccc--------------------cccEEEEcCCcc
Confidence            9999999999999999999999999999999855   45667777765                    799999999999


Q ss_pred             EEEEEecCCcEEEEECC---CCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcc
Q psy7108         167 CILAAGQSKYICIYSSR---EGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDM  243 (703)
Q Consensus       167 ~l~s~s~dg~I~lwD~~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~  243 (703)
                      .|++++.|++|++|+-.   ...++.++.++.+        .|.+++|++.|..++.++.++      +++||-..+.  
T Consensus       164 lL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~--------TVW~~~F~~~G~rl~s~sdD~------tv~Iw~~~~~--  227 (312)
T KOG0645|consen  164 LLFSCSYDNTIKVYRDEDDDDWECVQTLDGHEN--------TVWSLAFDNIGSRLVSCSDDG------TVSIWRLYTD--  227 (312)
T ss_pred             eeEEeccCCeEEEEeecCCCCeeEEEEecCccc--------eEEEEEecCCCceEEEecCCc------ceEeeeeccC--
Confidence            99999999999999876   2356777665544        899999999998888877663      8999975522  


Q ss_pred             ceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCce-------------ecceeeeEEEccchhhhHhhcCCcc
Q psy7108         244 AARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYV-------------FDPFLLDISITPQSVKEALADKDYA  309 (703)
Q Consensus       244 ~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~-------------~~~~~~~~~~spd~~~~~l~sg~~~  309 (703)
                        ....|...+..+.|.  ...||+++.|+ |++|.-..+-.             +..-+.++.+.|.. ...|++++.|
T Consensus       228 --~~~~~sr~~Y~v~W~--~~~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~-~~~L~s~~DD  302 (312)
T KOG0645|consen  228 --LSGMHSRALYDVPWD--NGVIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKV-SNRLASGGDD  302 (312)
T ss_pred             --cchhcccceEeeeec--ccceEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCC-CCceeecCCC
Confidence              112467789999998  44789999999 99998654311             22223568999942 4688999999


Q ss_pred             eEEEEEEecC
Q psy7108         310 KALMMSLKLN  319 (703)
Q Consensus       310 ~~l~la~~l~  319 (703)
                      +.+++ |.+.
T Consensus       303 G~v~~-W~l~  311 (312)
T KOG0645|consen  303 GIVNF-WELE  311 (312)
T ss_pred             ceEEE-EEec
Confidence            99998 8763

>KOG0296|consensus

Probab=99.93  E-value=1.1e-23  Score=206.69  Aligned_cols=216  Identities=16%  Similarity=0.262  Sum_probs=188.9

Q ss_pred             CCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCC
Q psy7108          34 AARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDG  113 (703)
Q Consensus        34 tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg  113 (703)
                      +|...  ..+.+|++.|+|+.|+.  +|.+||||+-+|.|+||...++.....+...-+.+.-+.|+|.+..|+.|+.||
T Consensus        95 ~ge~~--~eltgHKDSVt~~~Fsh--dgtlLATGdmsG~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DG  170 (399)
T KOG0296|consen   95 TGEFA--GELTGHKDSVTCCSFSH--DGTLLATGDMSGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDG  170 (399)
T ss_pred             CCcce--eEecCCCCceEEEEEcc--CceEEEecCCCccEEEEEcccCceEEEeecccCceEEEEecccccEEEeecCCC
Confidence            67766  88999999999999999  999999999999999999999987777776778899999999999999999999


Q ss_pred             eEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEe
Q psy7108         114 QLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTI  193 (703)
Q Consensus       114 ~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~  193 (703)
                      .+.+|.+.++...+.+.+|..                    ++++-.|.|||+.++++..||+|++||+.+++++.+...
T Consensus       171 svWmw~ip~~~~~kv~~Gh~~--------------------~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~  230 (399)
T KOG0296|consen  171 SVWMWQIPSQALCKVMSGHNS--------------------PCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQ  230 (399)
T ss_pred             cEEEEECCCcceeeEecCCCC--------------------CcccccccCCCceEEEEecCceEEEEecCCCceeEEecc
Confidence            999999999888888988765                    899999999999999999999999999999988766541


Q ss_pred             ccC-----------------------------------------------------------------------------
Q psy7108         194 TQN-----------------------------------------------------------------------------  196 (703)
Q Consensus       194 ~~~-----------------------------------------------------------------------------  196 (703)
                      ...                                                                             
T Consensus       231 ~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i  310 (399)
T KOG0296|consen  231 AEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDGTI  310 (399)
T ss_pred             cccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccccceE
Confidence            100                                                                             


Q ss_pred             ----------CccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEE
Q psy7108         197 ----------KSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAW  266 (703)
Q Consensus       197 ----------~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l  266 (703)
                                +..-.|+..|..+.|-+ ..++++++.+|      .|+.||.++|++...+.+|...|.+++.+|+++.+
T Consensus       311 ~iyD~a~~~~R~~c~he~~V~~l~w~~-t~~l~t~c~~g------~v~~wDaRtG~l~~~y~GH~~~Il~f~ls~~~~~v  383 (399)
T KOG0296|consen  311 AIYDLAASTLRHICEHEDGVTKLKWLN-TDYLLTACANG------KVRQWDARTGQLKFTYTGHQMGILDFALSPQKRLV  383 (399)
T ss_pred             EEEecccchhheeccCCCceEEEEEcC-cchheeeccCc------eEEeeeccccceEEEEecCchheeEEEEcCCCcEE
Confidence                      01123556677788877 66777777764      89999999999999999999999999999999999


Q ss_pred             EEEeCCC-EEEEEcC
Q psy7108         267 VAATTEG-VHIYSLD  280 (703)
Q Consensus       267 ~s~s~Dg-v~iwd~~  280 (703)
                      +|+|.|+ .+||+.+
T Consensus       384 vT~s~D~~a~VF~v~  398 (399)
T KOG0296|consen  384 VTVSDDNTALVFEVP  398 (399)
T ss_pred             EEecCCCeEEEEecC
Confidence            9999999 8999864

>KOG0282|consensus

Probab=99.93  E-value=1.5e-25  Score=227.02  Aligned_cols=248  Identities=17%  Similarity=0.274  Sum_probs=210.7

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCC-CceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEE
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVE-TDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFD  119 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~-~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd  119 (703)
                      .++.||+..|+++.|.|. .+.+|++|+.|+.|+||++.. +.+++...+|..+|.+++|+++|..+.+++.|+.|++||
T Consensus       208 ~~~~gH~kgvsai~~fp~-~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwD  286 (503)
T KOG0282|consen  208 HNLSGHTKGVSAIQWFPK-KGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWD  286 (503)
T ss_pred             eeccCCccccchhhhccc-eeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeeeec
Confidence            788999999999999996 789999999999999999987 667778888999999999999999999999999999999


Q ss_pred             cCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCC-CEEEEEecCCcEEEEECCCCceEEEEEeccCCc
Q psy7108         120 VESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADG-SCILAAGQSKYICIYSSREGILLKKFTITQNKS  198 (703)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg-~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~  198 (703)
                      +++|++...+....                     .++|+.|+||+ +.+++|+.|+.|+.||+++++.++.+..     
T Consensus       287 tETG~~~~~f~~~~---------------------~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~-----  340 (503)
T KOG0282|consen  287 TETGQVLSRFHLDK---------------------VPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDR-----  340 (503)
T ss_pred             cccceEEEEEecCC---------------------CceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHh-----
Confidence            99999999887654                     68999999998 8889999999999999999987766543     


Q ss_pred             cccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC-CccceEEEEEcCCCCEEEEEeCCC-EEE
Q psy7108         199 LDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK-PEVRVFCVKFSPTGQAWVAATTEG-VHI  276 (703)
Q Consensus       199 ~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~-h~~~V~~l~~spdg~~l~s~s~Dg-v~i  276 (703)
                         |...|..+.|-++|+..++++.+.      ++++|+.+..-.+..... +.-...++..+|++++++.-+.|. +.+
T Consensus       341 ---hLg~i~~i~F~~~g~rFissSDdk------s~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~i  411 (503)
T KOG0282|consen  341 ---HLGAILDITFVDEGRRFISSSDDK------SVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAI  411 (503)
T ss_pred             ---hhhheeeeEEccCCceEeeeccCc------cEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEE
Confidence               334899999999999998887663      899999888765544433 234467889999999999999999 999


Q ss_pred             EEcCC-----------CceecceeeeEEEccchhhhHhhcCCcceEEEEEEecCchhHHHHH
Q psy7108         277 YSLDS-----------GYVFDPFLLDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIHV  327 (703)
Q Consensus       277 wd~~~-----------~~~~~~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~~~~~~v  327 (703)
                      |.+..           |.....+...+.|||||  .+|.+|+.++.+.+ |+.+...++..+
T Consensus       412 fs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG--~~l~SGdsdG~v~~-wdwkt~kl~~~l  470 (503)
T KOG0282|consen  412 FSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDG--RTLCSGDSDGKVNF-WDWKTTKLVSKL  470 (503)
T ss_pred             EecccccccCHhhhhcceeccCceeeEEEcCCC--CeEEeecCCccEEE-eechhhhhhhcc
Confidence            98543           22233445779999999  99999999999998 988776555543

>KOG0281|consensus

Probab=99.93  E-value=2e-25  Score=216.65  Aligned_cols=240  Identities=16%  Similarity=0.294  Sum_probs=191.8

Q ss_pred             ceeeccC-CCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEE
Q psy7108          28 VKKGDMA-ARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEI  106 (703)
Q Consensus        28 v~~~d~t-g~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~l  106 (703)
                      +++||.+ -.++  ++|.||++.|.|+.|..    ..++|||.|.+|++||+++++.+...+.|.+.|..+.|+  +.++
T Consensus       219 ikiWD~n~~~c~--~~L~GHtGSVLCLqyd~----rviisGSSDsTvrvWDv~tge~l~tlihHceaVLhlrf~--ng~m  290 (499)
T KOG0281|consen  219 IKIWDKNSLECL--KILTGHTGSVLCLQYDE----RVIVSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFS--NGYM  290 (499)
T ss_pred             eEEeccccHHHH--HhhhcCCCcEEeeeccc----eEEEecCCCceEEEEeccCCchhhHHhhhcceeEEEEEe--CCEE
Confidence            6778754 4677  99999999999999954    799999999999999999999999999999999999998  5699


Q ss_pred             EEEECCCeEEEEEcCCCcE---EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECC
Q psy7108         107 VVATLDGQLIMFDVESAAQ---VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSR  183 (703)
Q Consensus       107 as~s~dg~I~vwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~  183 (703)
                      ++++.|.++.+||+.+...   .+.+.+|                    ...|+.+.|+  .+++++++.|.+|++|++.
T Consensus       291 vtcSkDrsiaVWdm~sps~it~rrVLvGH--------------------rAaVNvVdfd--~kyIVsASgDRTikvW~~s  348 (499)
T KOG0281|consen  291 VTCSKDRSIAVWDMASPTDITLRRVLVGH--------------------RAAVNVVDFD--DKYIVSASGDRTIKVWSTS  348 (499)
T ss_pred             EEecCCceeEEEeccCchHHHHHHHHhhh--------------------hhheeeeccc--cceEEEecCCceEEEEecc
Confidence            9999999999999976542   2233444                    4489999886  5699999999999999999


Q ss_pred             CCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCC
Q psy7108         184 EGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTG  263 (703)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg  263 (703)
                      ++++++++.+|..        .|-|+.+  .|+.++.++++      .+|++||+..|.++..+.+|+.-|.++.|  |.
T Consensus       349 t~efvRtl~gHkR--------GIAClQY--r~rlvVSGSSD------ntIRlwdi~~G~cLRvLeGHEeLvRciRF--d~  410 (499)
T KOG0281|consen  349 TCEFVRTLNGHKR--------GIACLQY--RDRLVVSGSSD------NTIRLWDIECGACLRVLEGHEELVRCIRF--DN  410 (499)
T ss_pred             ceeeehhhhcccc--------cceehhc--cCeEEEecCCC------ceEEEEeccccHHHHHHhchHHhhhheee--cC
Confidence            9999999876654        4444443  45666666555      59999999999999999999999999999  46


Q ss_pred             CEEEEEeCCC-EEEEEcCCCceeccee---------------eeEEEccchhhhHhhcCCcceEEEEEEecCc
Q psy7108         264 QAWVAATTEG-VHIYSLDSGYVFDPFL---------------LDISITPQSVKEALADKDYAKALMMSLKLNE  320 (703)
Q Consensus       264 ~~l~s~s~Dg-v~iwd~~~~~~~~~~~---------------~~~~~spd~~~~~l~sg~~~~~l~la~~l~~  320 (703)
                      +.+++|+.|| |+|||+.++.......               ..+.|.  .  ..+.+++.+.++.+ |+..+
T Consensus       411 krIVSGaYDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQFD--~--fqIvsssHddtILi-WdFl~  478 (499)
T KOG0281|consen  411 KRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD--E--FQIISSSHDDTILI-WDFLN  478 (499)
T ss_pred             ceeeeccccceEEEEecccccCCcccccchHHHhhhhccceeEEEeec--c--eEEEeccCCCeEEE-EEcCC
Confidence            7899999999 9999998775542221               223332  2  33556667777776 87653

>KOG0643|consensus

Probab=99.92  E-value=2e-23  Score=196.77  Aligned_cols=209  Identities=16%  Similarity=0.292  Sum_probs=181.9

Q ss_pred             cccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEE
Q psy7108          40 PEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFD  119 (703)
Q Consensus        40 ~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd  119 (703)
                      |-.|+||..+++.+.++.  +|++|.||+.|.+..+|-..+++.+....+|.+.|.|+..+-+.+.+++|+.|.++++||
T Consensus         3 pi~l~GHERplTqiKyN~--eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWD   80 (327)
T KOG0643|consen    3 PILLQGHERPLTQIKYNR--EGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWD   80 (327)
T ss_pred             ccccccCccccceEEecC--CCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEE
Confidence            346899999999999999  999999999999999999888988899999999999999999999999999999999999


Q ss_pred             cCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec-----CCcEEEEECCC-------Cce
Q psy7108         120 VESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ-----SKYICIYSSRE-------GIL  187 (703)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~-----dg~I~lwD~~~-------~~~  187 (703)
                      +++|+++.+++...                     +|..+.|+++|++++.+..     .+.|.++|++.       .++
T Consensus        81 v~tGk~la~~k~~~---------------------~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep  139 (327)
T KOG0643|consen   81 VETGKQLATWKTNS---------------------PVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEP  139 (327)
T ss_pred             cCCCcEEEEeecCC---------------------eeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCc
Confidence            99999999988754                     7999999999998887654     36799999983       344


Q ss_pred             EEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCc-cceeecCCccceEEEEEcCCCCEE
Q psy7108         188 LKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGD-MAARVLKPEVRVFCVKFSPTGQAW  266 (703)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~-~~~~~~~h~~~V~~l~~spdg~~l  266 (703)
                      ...+..+.        +.++++.|.|-++.++++..+|      .|..||+++|+ .+.....|...|+.++++||..++
T Consensus       140 ~~kI~t~~--------skit~a~Wg~l~~~ii~Ghe~G------~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~F  205 (327)
T KOG0643|consen  140 YLKIPTPD--------SKITSALWGPLGETIIAGHEDG------SISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYF  205 (327)
T ss_pred             eEEecCCc--------cceeeeeecccCCEEEEecCCC------cEEEEEcccCceeeechhhhccccccccccCCcceE
Confidence            44444333        4889999999999999988765      89999999984 455556799999999999999999


Q ss_pred             EEEeCCC-EEEEEcCCCcee
Q psy7108         267 VAATTEG-VHIYSLDSGYVF  285 (703)
Q Consensus       267 ~s~s~Dg-v~iwd~~~~~~~  285 (703)
                      ++++.|. .++||..+-+++
T Consensus       206 iT~s~Dttakl~D~~tl~v~  225 (327)
T KOG0643|consen  206 ITGSKDTTAKLVDVRTLEVL  225 (327)
T ss_pred             EecccCccceeeeccceeeE
Confidence            9999999 999998775543

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.92  E-value=5.3e-23  Score=242.43  Aligned_cols=233  Identities=13%  Similarity=0.225  Sum_probs=193.6

Q ss_pred             CCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEec-CCCEEEEEECCCeEEEEEcCCCc
Q psy7108          46 HEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKP-DGTEIVVATLDGQLIMFDVESAA  124 (703)
Q Consensus        46 H~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~sp-dg~~las~s~dg~I~vwd~~~~~  124 (703)
                      +...|.+++|+|. ++.+|++++.||+|++||+.+++....+..|.+.|.+++|+| ++.+|++|+.|++|++||++++.
T Consensus       531 ~~~~v~~l~~~~~-~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~  609 (793)
T PLN00181        531 SRSKLSGICWNSY-IKSQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGV  609 (793)
T ss_pred             ccCceeeEEeccC-CCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCc
Confidence            3568999999983 578999999999999999998877777778999999999997 78999999999999999999998


Q ss_pred             EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEc-CCCCEEEEEecCCcEEEEECCCCc-eEEEEEeccCCccccc
Q psy7108         125 QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYS-ADGSCILAAGQSKYICIYSSREGI-LLKKFTITQNKSLDGI  202 (703)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~s-pdg~~l~s~s~dg~I~lwD~~~~~-~~~~~~~~~~~~~~~~  202 (703)
                      .+..+..+.                     .+.+++|+ ++|..|++|+.|+.|++||+++.. .+..+.        +|
T Consensus       610 ~~~~~~~~~---------------------~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~--------~h  660 (793)
T PLN00181        610 SIGTIKTKA---------------------NICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMI--------GH  660 (793)
T ss_pred             EEEEEecCC---------------------CeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEec--------CC
Confidence            888776543                     68899995 579999999999999999998765 344443        34


Q ss_pred             cccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC------ccceeecCCccceEEEEEcCCCCEEEEEeCCC-EE
Q psy7108         203 NDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG------DMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VH  275 (703)
Q Consensus       203 ~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~------~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~  275 (703)
                      ...|.++.|. ++..+++++.++      .|++||++.+      .++..+.+|...+..++|+|++++|++|+.|+ |+
T Consensus       661 ~~~V~~v~f~-~~~~lvs~s~D~------~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~  733 (793)
T PLN00181        661 SKTVSYVRFV-DSSTLVSSSTDN------TLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVF  733 (793)
T ss_pred             CCCEEEEEEe-CCCEEEEEECCC------EEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEE
Confidence            4588999997 677777777653      8999998743      45677888999999999999999999999999 99


Q ss_pred             EEEcCCCcee-------------------cceeeeEEEccchhhhHhhcCCcceEEEEEEec
Q psy7108         276 IYSLDSGYVF-------------------DPFLLDISITPQSVKEALADKDYAKALMMSLKL  318 (703)
Q Consensus       276 iwd~~~~~~~-------------------~~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l  318 (703)
                      +|+.......                   ..+..+++|+|++  ..+++++.++.+++ |++
T Consensus       734 iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~--~~lva~~~dG~I~i-~~~  792 (793)
T PLN00181        734 VYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQS--STLVAANSTGNIKI-LEM  792 (793)
T ss_pred             EEECCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCC--CeEEEecCCCcEEE-Eec
Confidence            9997644211                   1245779999999  78999999999988 764

>KOG0293|consensus

Probab=99.92  E-value=8.3e-24  Score=209.96  Aligned_cols=246  Identities=20%  Similarity=0.312  Sum_probs=201.1

Q ss_pred             CCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEec-CCCcEEEEEEecCCCEEEEEECCC
Q psy7108          35 ARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQ-LLSDALCVAYKPDGTEIVVATLDG  113 (703)
Q Consensus        35 g~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~-~~~~V~~v~~spdg~~las~s~dg  113 (703)
                      -++.  +++.||..+|..+.|||  |.++|++|+.|..+++||+.++........ +...+.+++|.|||..+++|+.|+
T Consensus       259 ~kl~--~tlvgh~~~V~yi~wSP--DdryLlaCg~~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr  334 (519)
T KOG0293|consen  259 FKLK--KTLVGHSQPVSYIMWSP--DDRYLLACGFDEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDR  334 (519)
T ss_pred             eeee--eeeecccCceEEEEECC--CCCeEEecCchHheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCC
Confidence            3556  89999999999999999  999999999999999999999865433322 457899999999999999999999


Q ss_pred             eEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEe
Q psy7108         114 QLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTI  193 (703)
Q Consensus       114 ~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~  193 (703)
                      ++..||++ |......++.+.                   ..|.+++.++||+++++.+.|..|++++.++........ 
T Consensus       335 ~i~~wdlD-gn~~~~W~gvr~-------------------~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr~lis-  393 (519)
T KOG0293|consen  335 TIIMWDLD-GNILGNWEGVRD-------------------PKVHDLAITYDGKYVLLVTVDKKIRLYNREARVDRGLIS-  393 (519)
T ss_pred             cEEEecCC-cchhhccccccc-------------------ceeEEEEEcCCCcEEEEEecccceeeechhhhhhhcccc-
Confidence            99999997 444444544332                   269999999999999999999999999998765554332 


Q ss_pred             ccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccc--eEEEEEcC-CCCEEEEEe
Q psy7108         194 TQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVR--VFCVKFSP-TGQAWVAAT  270 (703)
Q Consensus       194 ~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~--V~~l~~sp-dg~~l~s~s  270 (703)
                              ...++++.+.|.||++.++.-..      ..+++||++....+.++.+|...  +..-+|-. +..++++|+
T Consensus       394 --------e~~~its~~iS~d~k~~LvnL~~------qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGS  459 (519)
T KOG0293|consen  394 --------EEQPITSFSISKDGKLALVNLQD------QEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGS  459 (519)
T ss_pred             --------ccCceeEEEEcCCCcEEEEEccc------CeeEEeecchhhHHHHhhcccccceEEEeccCCCCcceEEecC
Confidence                    22479999999999999887765      37999999988889899988654  33335544 457889999


Q ss_pred             CCC-EEEEEcCCCceeccee------eeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108         271 TEG-VHIYSLDSGYVFDPFL------LDISITPQSVKEALADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       271 ~Dg-v~iwd~~~~~~~~~~~------~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~  321 (703)
                      +|+ |+||+..+|..+..+.      ..++++|.. ..++|+++.|+++++ |....+
T Consensus       460 ED~kvyIWhr~sgkll~~LsGHs~~vNcVswNP~~-p~m~ASasDDgtIRI-Wg~~~~  515 (519)
T KOG0293|consen  460 EDSKVYIWHRISGKLLAVLSGHSKTVNCVSWNPAD-PEMFASASDDGTIRI-WGPSDN  515 (519)
T ss_pred             CCceEEEEEccCCceeEeecCCcceeeEEecCCCC-HHHhhccCCCCeEEE-ecCCcc
Confidence            999 9999999999876653      569999976 368999999999999 987643

>KOG0278|consensus

Probab=99.91  E-value=7.1e-24  Score=197.79  Aligned_cols=238  Identities=17%  Similarity=0.252  Sum_probs=203.0

Q ss_pred             ceeeEEeeecccCCceEEecCC-------------ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCC
Q psy7108           6 NVSLIETRETHEGGNVVLKLPG-------------VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDK   71 (703)
Q Consensus         6 ~~~~~~~~~~~~~~~~~i~~~~-------------v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg   71 (703)
                      ..+-+-++.+|.|..|...+..             .++|| .+|..+  ..+. |..-|.+++|+.  |.+.|+||+.++
T Consensus        48 tgdwigtfeghkgavw~~~l~~na~~aasaaadftakvw~a~tgdel--hsf~-hkhivk~~af~~--ds~~lltgg~ek  122 (334)
T KOG0278|consen   48 TGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDAVTGDEL--HSFE-HKHIVKAVAFSQ--DSNYLLTGGQEK  122 (334)
T ss_pred             CCCcEEeeeccCcceeeeecCchhhhhhhhcccchhhhhhhhhhhhh--hhhh-hhheeeeEEecc--cchhhhccchHH
Confidence            3455778888888888777654             46677 688877  7775 889999999999  999999999999


Q ss_pred             cEEEEEcCCCc-eeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcc
Q psy7108          72 TVKLWNAVETD-TQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQS  150 (703)
Q Consensus        72 ~V~iWd~~~~~-~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (703)
                      .+||+|++..+ +..++.+|.+.|..+.|....+.|++++.|++|++||.+++..++++....                 
T Consensus       123 llrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~~~s-----------------  185 (334)
T KOG0278|consen  123 LLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLEFNS-----------------  185 (334)
T ss_pred             HhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEEecCC-----------------
Confidence            99999997654 456677899999999999999999999999999999999999999988755                 


Q ss_pred             cCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCe
Q psy7108         151 LKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGN  230 (703)
Q Consensus       151 ~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~  230 (703)
                          +|+++.+++||++|.++ ..+.|..||..+...++.+..+.         .|.+...+|+...++.++.+      
T Consensus       186 ----~VtSlEvs~dG~ilTia-~gssV~Fwdaksf~~lKs~k~P~---------nV~SASL~P~k~~fVaGged------  245 (334)
T KOG0278|consen  186 ----PVTSLEVSQDGRILTIA-YGSSVKFWDAKSFGLLKSYKMPC---------NVESASLHPKKEFFVAGGED------  245 (334)
T ss_pred             ----CCcceeeccCCCEEEEe-cCceeEEeccccccceeeccCcc---------ccccccccCCCceEEecCcc------
Confidence                69999999999877665 44779999999999998887655         47888999999776665544      


Q ss_pred             eEEECCCCCCCccceee-cCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCcee
Q psy7108         231 VVLKLPGVKKGDMAARV-LKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVF  285 (703)
Q Consensus       231 ~~i~iwd~~~~~~~~~~-~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~  285 (703)
                      ..++.||..+++.+... .+|.++|.|+.|+|||...++|++|| |++|.+..++..
T Consensus       246 ~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~~~~  302 (334)
T KOG0278|consen  246 FKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTTPGKTY  302 (334)
T ss_pred             eEEEEEeccCCceeeecccCCCCceEEEEECCCCceeeccCCCceEEEEEecCCCch
Confidence            48899999999988875 88999999999999999999999999 999998766543

>KOG0313|consensus

Probab=99.91  E-value=2.8e-23  Score=204.67  Aligned_cols=265  Identities=18%  Similarity=0.261  Sum_probs=203.9

Q ss_pred             ceeeccCCCccccccccCCCcCeEEEEEcCC-CCCCEEEEEeCCCcEEEEEcCCCcee----EEEecCCCcEEEEEEecC
Q psy7108          28 VKKGDMAARVLKPEVLSGHEGPVSCIEFSPV-LSSTGMVSASWDKTVKLWNAVETDTQ----HETIQLLSDALCVAYKPD  102 (703)
Q Consensus        28 v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~-~dg~~L~sgs~Dg~V~iWd~~~~~~~----~~~~~~~~~V~~v~~spd  102 (703)
                      .++||..|++.  .++.||+++|.+++|.-. .....++++|.|.++++|.++.+...    ....+|...|-+++..++
T Consensus       127 ~riWd~~Gk~~--~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~s  204 (423)
T KOG0313|consen  127 SRIWDLKGKSI--KTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDSS  204 (423)
T ss_pred             eEEEecCCceE--EEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhhHHhHhcccccceeEEEecCC
Confidence            67889999999  999999999999988651 02236999999999999998766532    233479999999999999


Q ss_pred             CCEEEEEECCCeEEEEEcCCCcEEEEEecccc---CCCCC---CCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCc
Q psy7108         103 GTEIVVATLDGQLIMFDVESAAQVGSVEARRD---LDSGR---LDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKY  176 (703)
Q Consensus       103 g~~las~s~dg~I~vwd~~~~~~~~~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~  176 (703)
                      |..+++|+.|.+|++|+.. ......++....   -...+   .....+.....+|.++|.++.|++ ...+.+++.|.+
T Consensus       205 gtr~~SgS~D~~lkiWs~~-~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d-~~v~yS~SwDHT  282 (423)
T KOG0313|consen  205 GTRFCSGSWDTMLKIWSVE-TDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD-ATVIYSVSWDHT  282 (423)
T ss_pred             CCeEEeecccceeeecccC-CCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcC-CCceEeecccce
Confidence            9999999999999999932 222222221111   00000   111112223457888999999998 668999999999


Q ss_pred             EEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCc---cceeecCCccc
Q psy7108         177 ICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGD---MAARVLKPEVR  253 (703)
Q Consensus       177 I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~---~~~~~~~h~~~  253 (703)
                      |+.||+.++.++.++....         .++++..+|..+.++.++.+      +.+++||.+++.   ..+.+.+|...
T Consensus       283 Ik~WDletg~~~~~~~~~k---------sl~~i~~~~~~~Ll~~gssd------r~irl~DPR~~~gs~v~~s~~gH~nw  347 (423)
T KOG0313|consen  283 IKVWDLETGGLKSTLTTNK---------SLNCISYSPLSKLLASGSSD------RHIRLWDPRTGDGSVVSQSLIGHKNW  347 (423)
T ss_pred             EEEEEeecccceeeeecCc---------ceeEeecccccceeeecCCC------CceeecCCCCCCCceeEEeeecchhh
Confidence            9999999999888776433         67899999999988888776      589999999874   34667899999


Q ss_pred             eEEEEEcCCCCE-EEEEeCCC-EEEEEcCCCc-ee------cceeeeEEEccchhhhHhhcCCcceEEEE
Q psy7108         254 VFCVKFSPTGQA-WVAATTEG-VHIYSLDSGY-VF------DPFLLDISITPQSVKEALADKDYAKALMM  314 (703)
Q Consensus       254 V~~l~~spdg~~-l~s~s~Dg-v~iwd~~~~~-~~------~~~~~~~~~spd~~~~~l~sg~~~~~l~l  314 (703)
                      |.++.|+|...+ |++++.|+ +++||+++.. .+      ..-.+++.|...+   .+.+|+.|..+++
T Consensus       348 Vssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~~~~---~IvSGGaD~~l~i  414 (423)
T KOG0313|consen  348 VSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWNEGG---LIVSGGADNKLRI  414 (423)
T ss_pred             hhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeeccCCceEEEEeccCCc---eEEeccCcceEEE
Confidence            999999998765 69999999 9999998766 32      2234677777654   7889999999987

>KOG0275|consensus

Probab=99.91  E-value=1.3e-24  Score=209.26  Aligned_cols=235  Identities=20%  Similarity=0.344  Sum_probs=191.9

Q ss_pred             CCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeE--------EEecCCCcEEEEEEecCCCEEEEEECCCeEE
Q psy7108          45 GHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQH--------ETIQLLSDALCVAYKPDGTEIVVATLDGQLI  116 (703)
Q Consensus        45 gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~--------~~~~~~~~V~~v~~spdg~~las~s~dg~I~  116 (703)
                      |..+.+-|..|+|  ||++|++||.||-|.+||..+++...        .+.-+..+|.|++||.|...+|+|+.||.|+
T Consensus       211 g~KSh~EcA~FSP--DgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIK  288 (508)
T KOG0275|consen  211 GQKSHVECARFSP--DGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIK  288 (508)
T ss_pred             ccccchhheeeCC--CCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEE
Confidence            4567789999999  99999999999999999998875322        2334778999999999999999999999999


Q ss_pred             EEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccC
Q psy7108         117 MFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQN  196 (703)
Q Consensus       117 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~  196 (703)
                      +|.+++|.+++.++..                   |...|+|+.|+.|+..+++++.|.++++.-+.+|++++.|.+|..
T Consensus       289 vWri~tG~ClRrFdrA-------------------HtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsS  349 (508)
T KOG0275|consen  289 VWRIETGQCLRRFDRA-------------------HTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSS  349 (508)
T ss_pred             EEEEecchHHHHhhhh-------------------hccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccc
Confidence            9999999999888732                   344899999999999999999999999999999999999886655


Q ss_pred             CccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC---------------------------
Q psy7108         197 KSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK---------------------------  249 (703)
Q Consensus       197 ~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~---------------------------  249 (703)
                              .|+...|++||..++.+++++      +|++|+.++.++..++..                           
T Consensus       350 --------yvn~a~ft~dG~~iisaSsDg------tvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsn  415 (508)
T KOG0275|consen  350 --------YVNEATFTDDGHHIISASSDG------TVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSN  415 (508)
T ss_pred             --------cccceEEcCCCCeEEEecCCc------cEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCC
Confidence                    999999999999999998875      899999988776543321                           


Q ss_pred             --------------------CccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecce------eeeEEEccchhhhH
Q psy7108         250 --------------------PEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPF------LLDISITPQSVKEA  302 (703)
Q Consensus       250 --------------------h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~------~~~~~~spd~~~~~  302 (703)
                                          ..+...+...||.|.++.+.++|+ ++.|.+.+|.....+      ...++-+|..  ++
T Consensus       416 tv~imn~qGQvVrsfsSGkREgGdFi~~~lSpkGewiYcigED~vlYCF~~~sG~LE~tl~VhEkdvIGl~HHPHq--Nl  493 (508)
T KOG0275|consen  416 TVYIMNMQGQVVRSFSSGKREGGDFINAILSPKGEWIYCIGEDGVLYCFSVLSGKLERTLPVHEKDVIGLTHHPHQ--NL  493 (508)
T ss_pred             eEEEEeccceEEeeeccCCccCCceEEEEecCCCcEEEEEccCcEEEEEEeecCceeeeeecccccccccccCccc--ch
Confidence                                012344566788888888888888 788888887764333      2345666766  78


Q ss_pred             hhcCCcceEEEEEEe
Q psy7108         303 LADKDYAKALMMSLK  317 (703)
Q Consensus       303 l~sg~~~~~l~la~~  317 (703)
                      +++-+.|+.+++ |+
T Consensus       494 lAsYsEDgllKL-Wk  507 (508)
T KOG0275|consen  494 LASYSEDGLLKL-WK  507 (508)
T ss_pred             hhhhcccchhhh-cC
Confidence            888888887776 53

>KOG0296|consensus

Probab=99.91  E-value=1.4e-22  Score=198.92  Aligned_cols=169  Identities=14%  Similarity=0.225  Sum_probs=151.0

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEc
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDV  120 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~  120 (703)
                      .+|..|+++|.+++.+|  +.++++||+.|..-.+|++.++.......+|+..|+++.|+.||.+||+|+.+|.|+||+.
T Consensus        58 ~tF~~H~~svFavsl~P--~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~  135 (399)
T KOG0296|consen   58 VTFDKHTDSVFAVSLHP--NNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKV  135 (399)
T ss_pred             eehhhcCCceEEEEeCC--CCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEc
Confidence            57899999999999999  9999999999999999999999888888999999999999999999999999999999999


Q ss_pred             CCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccc
Q psy7108         121 ESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLD  200 (703)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~  200 (703)
                      .++.....+...-.                    .+.-+.|+|-+..|++|+.||.+.+|.+.++...+.+.+|      
T Consensus       136 stg~~~~~~~~e~~--------------------dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh------  189 (399)
T KOG0296|consen  136 STGGEQWKLDQEVE--------------------DIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGH------  189 (399)
T ss_pred             ccCceEEEeecccC--------------------ceEEEEecccccEEEeecCCCcEEEEECCCcceeeEecCC------
Confidence            99988887763322                    6788999999999999999999999999987677777654      


Q ss_pred             cccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccce
Q psy7108         201 GINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAA  245 (703)
Q Consensus       201 ~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~  245 (703)
                        ..++++-.|.|+|+.++.+..++      +|++|+.+++++..
T Consensus       190 --~~~ct~G~f~pdGKr~~tgy~dg------ti~~Wn~ktg~p~~  226 (399)
T KOG0296|consen  190 --NSPCTCGEFIPDGKRILTGYDDG------TIIVWNPKTGQPLH  226 (399)
T ss_pred             --CCCcccccccCCCceEEEEecCc------eEEEEecCCCceeE
Confidence              44888999999999999888764      89999998876543

>KOG0276|consensus

Probab=99.91  E-value=2.8e-23  Score=215.80  Aligned_cols=249  Identities=11%  Similarity=0.160  Sum_probs=219.3

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEc
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDV  120 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~  120 (703)
                      +.+..|+..|.++.++|  ...+++++-..|.|.|||.++...+..+.-..-+|++..|-+.-+++++|+.|..|+||+.
T Consensus         7 rk~~~rSdRVKsVd~HP--tePw~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfny   84 (794)
T KOG0276|consen    7 RKFQSRSDRVKSVDFHP--TEPWILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNY   84 (794)
T ss_pred             hHhhccCCceeeeecCC--CCceEEEeeecCeeEEEecccceeeeeeeecccchhhheeeeccceEEEecCCceEEEEec
Confidence            56677999999999999  8999999999999999999988777777778889999999999999999999999999999


Q ss_pred             CCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCC-ceEEEEEeccCCcc
Q psy7108         121 ESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREG-ILLKKFTITQNKSL  199 (703)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~-~~~~~~~~~~~~~~  199 (703)
                      ++++.+..++.|.+                    .|.+++.+|..-+++++|.|-+|++||-+.. .+.++|++|..   
T Consensus        85 nt~ekV~~FeAH~D--------------------yIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~H---  141 (794)
T KOG0276|consen   85 NTGEKVKTFEAHSD--------------------YIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEH---  141 (794)
T ss_pred             ccceeeEEeecccc--------------------ceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcce---
Confidence            99999999999987                    8999999999999999999999999999864 67777776665   


Q ss_pred             ccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCC--CEEEEEeCCC-EEE
Q psy7108         200 DGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTG--QAWVAATTEG-VHI  276 (703)
Q Consensus       200 ~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg--~~l~s~s~Dg-v~i  276 (703)
                           .|.+++|.|....-+++++-+     ++|++|.+.+..+..++.+|+..|+++++-+-|  .+|++|++|. ++|
T Consensus       142 -----yVMqv~fnPkD~ntFaS~sLD-----rTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKv  211 (794)
T KOG0276|consen  142 -----YVMQVAFNPKDPNTFASASLD-----RTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKV  211 (794)
T ss_pred             -----EEEEEEecCCCccceeeeecc-----ccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEE
Confidence                 999999999876555555433     699999999999999999999999999998754  6999999999 999


Q ss_pred             EEcCCCceeccee------eeEEEccchhhhHhhcCCcceEEEEEEecCchhHHHHH
Q psy7108         277 YSLDSGYVFDPFL------LDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIHV  327 (703)
Q Consensus       277 wd~~~~~~~~~~~------~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~~~~~~v  327 (703)
                      ||.++.++++.+.      ..+.|+|.-  .++.+|+.|+++++ |.....++...+
T Consensus       212 WDyQtk~CV~TLeGHt~Nvs~v~fhp~l--piiisgsEDGTvri-Whs~Ty~lE~tL  265 (794)
T KOG0276|consen  212 WDYQTKSCVQTLEGHTNNVSFVFFHPEL--PIIISGSEDGTVRI-WNSKTYKLEKTL  265 (794)
T ss_pred             eecchHHHHHHhhcccccceEEEecCCC--cEEEEecCCccEEE-ecCcceehhhhh
Confidence            9999998877764      457888887  88999999999999 887776555443

>KOG1407|consensus

Probab=99.91  E-value=6.4e-23  Score=192.88  Aligned_cols=235  Identities=15%  Similarity=0.248  Sum_probs=197.8

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeE--EEecCCCcEEEEEEecCC-CEEEEEECCCeEEE
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQH--ETIQLLSDALCVAYKPDG-TEIVVATLDGQLIM  117 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~--~~~~~~~~V~~v~~spdg-~~las~s~dg~I~v  117 (703)
                      +.+.+|.+.|.+++|+.  +|..|++|+.|+++++|+++......  ...+|.+.|-.++|+|.. ..+++++.|++|++
T Consensus        14 r~~~~~~~~v~Sv~wn~--~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~   91 (313)
T KOG1407|consen   14 RELQGHVQKVHSVAWNC--DGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRI   91 (313)
T ss_pred             HHhhhhhhcceEEEEcc--cCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEE
Confidence            56789999999999999  99999999999999999998664332  234588899999998854 68999999999999


Q ss_pred             EEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCC
Q psy7108         118 FDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNK  197 (703)
Q Consensus       118 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~  197 (703)
                      ||++++++...+....                     .-..++|+|+|+++++++.|..|...|.++.+.....+.    
T Consensus        92 wd~r~~k~~~~i~~~~---------------------eni~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~----  146 (313)
T KOG1407|consen   92 WDIRSGKCTARIETKG---------------------ENINITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQF----  146 (313)
T ss_pred             EEeccCcEEEEeeccC---------------------cceEEEEcCCCCEEEEecCcccEEEEEecccceeehhcc----
Confidence            9999999988776643                     234689999999999999999999999999887766542    


Q ss_pred             ccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEE
Q psy7108         198 SLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHI  276 (703)
Q Consensus       198 ~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~i  276 (703)
                           ...++.++|+.++..++...+.|      .|.|.....-++++.+..|.....|+.|+|+|++||+|+.|. +.+
T Consensus       147 -----~~e~ne~~w~~~nd~Fflt~GlG------~v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSL  215 (313)
T KOG1407|consen  147 -----KFEVNEISWNNSNDLFFLTNGLG------CVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSL  215 (313)
T ss_pred             -----cceeeeeeecCCCCEEEEecCCc------eEEEEeccccccccccccCCcceEEEEECCCCceEeeccccceeec
Confidence                 23677889998888877776654      677776667788999999999999999999999999999999 999


Q ss_pred             EEcCCCceecce------eeeEEEccchhhhHhhcCCcceEEEEE
Q psy7108         277 YSLDSGYVFDPF------LLDISITPQSVKEALADKDYAKALMMS  315 (703)
Q Consensus       277 wd~~~~~~~~~~------~~~~~~spd~~~~~l~sg~~~~~l~la  315 (703)
                      ||++.--+...+      +..++||-+|  ++||+++.|.-|.+|
T Consensus       216 WD~~ELiC~R~isRldwpVRTlSFS~dg--~~lASaSEDh~IDIA  258 (313)
T KOG1407|consen  216 WDVDELICERCISRLDWPVRTLSFSHDG--RMLASASEDHFIDIA  258 (313)
T ss_pred             cChhHhhhheeeccccCceEEEEeccCc--ceeeccCccceEEeE
Confidence            999876554443      4679999999  999999999988874

>KOG0318|consensus

Probab=99.90  E-value=5.3e-22  Score=202.93  Aligned_cols=239  Identities=13%  Similarity=0.291  Sum_probs=196.5

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCcee-E-EEecCCCcEEEEEEecCCCEEEEEECC----Ce
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQ-H-ETIQLLSDALCVAYKPDGTEIVVATLD----GQ  114 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~-~-~~~~~~~~V~~v~~spdg~~las~s~d----g~  114 (703)
                      .++..|..+++-..++|  .|.++|||...|+|||||....+.+ + ++....++|..++|++|++.|++.+..    |.
T Consensus        53 ~iYtEH~~~vtVAkySP--sG~yiASGD~sG~vRIWdtt~~~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGEGrerfg~  130 (603)
T KOG0318|consen   53 DIYTEHAHQVTVAKYSP--SGFYIASGDVSGKVRIWDTTQKEHILKNEFQVLAGPIKDISWDFDSKRIAAVGEGRERFGH  130 (603)
T ss_pred             eeeccccceeEEEEeCC--CceEEeecCCcCcEEEEeccCcceeeeeeeeecccccccceeCCCCcEEEEEecCccceeE
Confidence            78899999999999999  9999999999999999998664432 2 334478899999999999999887653    34


Q ss_pred             EEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCC-CEEEEEecCCcEEEEECCCCceEEEEEe
Q psy7108         115 LIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADG-SCILAAGQSKYICIYSSREGILLKKFTI  193 (703)
Q Consensus       115 I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg-~~l~s~s~dg~I~lwD~~~~~~~~~~~~  193 (703)
                      +.+||  +|..+..+.+|..                    .|.+++|-|.. -.+++|+.|++|.+|+-.-.+...++..
T Consensus       131 ~F~~D--SG~SvGei~GhSr--------------------~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~  188 (603)
T KOG0318|consen  131 VFLWD--SGNSVGEITGHSR--------------------RINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFRE  188 (603)
T ss_pred             EEEec--CCCccceeeccce--------------------eEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecccc
Confidence            66665  6777888888865                    89999999865 4588999999999999665555555544


Q ss_pred             ccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeec---CCccceEEEEEcCCCCEEEEEe
Q psy7108         194 TQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL---KPEVRVFCVKFSPTGQAWVAAT  270 (703)
Q Consensus       194 ~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~---~h~~~V~~l~~spdg~~l~s~s  270 (703)
                      |.        ..|+++.|+|||..+++.+.++      .+.+||-++|+.+..+.   +|.+.|.+++|+||+..+++++
T Consensus       189 Hs--------kFV~~VRysPDG~~Fat~gsDg------ki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~S  254 (603)
T KOG0318|consen  189 HS--------KFVNCVRYSPDGSRFATAGSDG------KIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVS  254 (603)
T ss_pred             cc--------cceeeEEECCCCCeEEEecCCc------cEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEec
Confidence            44        4999999999999999988875      89999999999988887   7999999999999999999999


Q ss_pred             CCC-EEEEEcCCCceeccee-------------------------------------------------eeEEEccchhh
Q psy7108         271 TEG-VHIYSLDSGYVFDPFL-------------------------------------------------LDISITPQSVK  300 (703)
Q Consensus       271 ~Dg-v~iwd~~~~~~~~~~~-------------------------------------------------~~~~~spd~~~  300 (703)
                      .|. ++|||+.+.++...+.                                                 ..+..+|++  
T Consensus       255 aDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~--  332 (603)
T KOG0318|consen  255 ADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDG--  332 (603)
T ss_pred             CCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCC--
Confidence            999 9999998876644332                                                 235667777  


Q ss_pred             hHhhcCCcceEEEEEEecCc
Q psy7108         301 EALADKDYAKALMMSLKLNE  320 (703)
Q Consensus       301 ~~l~sg~~~~~l~la~~l~~  320 (703)
                      ..+.++++|+.+.- |....
T Consensus       333 ~~i~SgsyDG~I~~-W~~~~  351 (603)
T KOG0318|consen  333 KTIYSGSYDGHINS-WDSGS  351 (603)
T ss_pred             CEEEeeccCceEEE-EecCC
Confidence            77888888888776 87764

>PLN02872 triacylglycerol lipase

Probab=99.90  E-value=1.5e-25  Score=238.65  Aligned_cols=194  Identities=16%  Similarity=0.139  Sum_probs=155.2

Q ss_pred             ccCcCCccceeeeecccchhhhhhhhcCCcccccccccccCCCCCCcCCCcccceeecccCcCCCCCCccccccCchhhh
Q psy7108         445 NLTSEQNKFYRFSCDFNVYTLELISRLGPLRIKPKVEKMETGSSDEESSKDDETEIRVLDEDVPRSSDTGDIQLKSTRMN  524 (703)
Q Consensus       445 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  524 (703)
                      .+..+..+.++|++|.|.++|+|||+|.+.||++....                               .....+|||++
T Consensus        31 t~~~~~i~~~gy~~e~h~v~T~DGy~L~l~ri~~~~~~-------------------------------~~~~~~~~Vll   79 (395)
T PLN02872         31 SLCAQLIHPAGYSCTEHTIQTKDGYLLALQRVSSRNPR-------------------------------LGSQRGPPVLL   79 (395)
T ss_pred             hhHHHHHHHcCCCceEEEEECCCCcEEEEEEcCCCCCC-------------------------------CCCCCCCeEEE
Confidence            34566678899999999999999999999999843210                               01124789999


Q ss_pred             hcccCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhhhcccccchhhhcccccceeee
Q psy7108         525 ELGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLGNLVTKDMLEGLYGIYALN  604 (703)
Q Consensus       525 ~~g~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~s  604 (703)
                      .||+.+.++  .|..+.+.++..++++  +.|++||+.+.|+..++..........                 .+||+|+
T Consensus        80 ~HGl~~ss~--~w~~~~~~~sla~~La--~~GydV~l~n~RG~~~s~gh~~~~~~~-----------------~~fw~~s  138 (395)
T PLN02872         80 QHGLFMAGD--AWFLNSPEQSLGFILA--DHGFDVWVGNVRGTRWSYGHVTLSEKD-----------------KEFWDWS  138 (395)
T ss_pred             eCccccccc--ceeecCcccchHHHHH--hCCCCcccccccccccccCCCCCCccc-----------------hhccCCc
Confidence            999999988  9988877555555555  678999999999877764322222111                 1789999


Q ss_pred             eeeeeecchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccccCCCCChhhHH-------
Q psy7108         605 IFQVGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLGNLVTRDMLE-------  677 (703)
Q Consensus       605 ~~e~~~~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~~~~~~~~~~~-------  677 (703)
                      |+|++.||+||+||||++.++ .+++||||||||+++++++. +|+++++|+.+++++|++++.+..++....       
T Consensus       139 ~~e~a~~Dl~a~id~i~~~~~-~~v~~VGhS~Gg~~~~~~~~-~p~~~~~v~~~~~l~P~~~~~~~~~~~~~~~~~~~~~  216 (395)
T PLN02872        139 WQELALYDLAEMIHYVYSITN-SKIFIVGHSQGTIMSLAALT-QPNVVEMVEAAALLCPISYLDHVTAPLVLRMVFMHLD  216 (395)
T ss_pred             HHHHHHHHHHHHHHHHHhccC-CceEEEEECHHHHHHHHHhh-ChHHHHHHHHHHHhcchhhhccCCCHHHHHHHHHhHH
Confidence            999999999999999998887 68999999999999998774 799999999999999999999999985321       


Q ss_pred             HHHHhhccccccchh
Q psy7108         678 GLYGIYAEYQTISGY  692 (703)
Q Consensus       678 ~~~~~~~~~~~~~~~  692 (703)
                      .++..+|..+|+|.+
T Consensus       217 ~~~~~~g~~~~~~~~  231 (395)
T PLN02872        217 QMVVAMGIHQLNFRS  231 (395)
T ss_pred             HHHHHhcCceecCCc
Confidence            244568999998876

>KOG0281|consensus

Probab=99.90  E-value=8.3e-24  Score=205.50  Aligned_cols=228  Identities=14%  Similarity=0.302  Sum_probs=191.6

Q ss_pred             CCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcE
Q psy7108          46 HEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQ  125 (703)
Q Consensus        46 H~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~  125 (703)
                      ....|+|+.+    |...+++|..|++|+|||..+..+...+.+|.+.|.|+.|.  .+.|++|+.|.+|++||.+++++
T Consensus       196 ~skgVYClQY----DD~kiVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqyd--~rviisGSSDsTvrvWDv~tge~  269 (499)
T KOG0281|consen  196 NSKGVYCLQY----DDEKIVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQYD--ERVIVSGSSDSTVRVWDVNTGEP  269 (499)
T ss_pred             cCCceEEEEe----cchhhhcccccCceEEeccccHHHHHhhhcCCCcEEeeecc--ceEEEecCCCceEEEEeccCCch
Confidence            3578999999    55789999999999999999888888889999999999986  56999999999999999999999


Q ss_pred             EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCcccccccc
Q psy7108         126 VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDF  205 (703)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~  205 (703)
                      +.++-+|-+                    .|..+.|+  ..++++++.|.+|.+||+.+...+     .....+.||...
T Consensus       270 l~tlihHce--------------------aVLhlrf~--ng~mvtcSkDrsiaVWdm~sps~i-----t~rrVLvGHrAa  322 (499)
T KOG0281|consen  270 LNTLIHHCE--------------------AVLHLRFS--NGYMVTCSKDRSIAVWDMASPTDI-----TLRRVLVGHRAA  322 (499)
T ss_pred             hhHHhhhcc--------------------eeEEEEEe--CCEEEEecCCceeEEEeccCchHH-----HHHHHHhhhhhh
Confidence            999888766                    89999997  468999999999999999865321     112335567779


Q ss_pred             ceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCce
Q psy7108         206 INRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYV  284 (703)
Q Consensus       206 v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~  284 (703)
                      |+.+.|+..  ++++++++      +++++|+..+++++..+.+|...|.|+.+  .|+++++|+.|. |++||...|.+
T Consensus       323 VNvVdfd~k--yIVsASgD------RTikvW~~st~efvRtl~gHkRGIAClQY--r~rlvVSGSSDntIRlwdi~~G~c  392 (499)
T KOG0281|consen  323 VNVVDFDDK--YIVSASGD------RTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGAC  392 (499)
T ss_pred             eeeeccccc--eEEEecCC------ceEEEEeccceeeehhhhcccccceehhc--cCeEEEecCCCceEEEEeccccHH
Confidence            999988644  66666554      69999999999999999999999988876  588999999999 99999999988


Q ss_pred             ecce------eeeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108         285 FDPF------LLDISITPQSVKEALADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       285 ~~~~------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~  321 (703)
                      +..+      +.++.|...    -+.+|.||+++++ |+++..
T Consensus       393 LRvLeGHEeLvRciRFd~k----rIVSGaYDGkikv-Wdl~aa  430 (499)
T KOG0281|consen  393 LRVLEGHEELVRCIRFDNK----RIVSGAYDGKIKV-WDLQAA  430 (499)
T ss_pred             HHHHhchHHhhhheeecCc----eeeeccccceEEE-Eecccc
Confidence            5444      456776553    4789999999999 998743

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.90  E-value=6.3e-22  Score=233.32  Aligned_cols=238  Identities=12%  Similarity=0.183  Sum_probs=194.4

Q ss_pred             ccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc-------eeEEEecCCCcEEEEEEecC-CCEEEEEECCCe
Q psy7108          43 LSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD-------TQHETIQLLSDALCVAYKPD-GTEIVVATLDGQ  114 (703)
Q Consensus        43 l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~-------~~~~~~~~~~~V~~v~~spd-g~~las~s~dg~  114 (703)
                      +.+|.+.|++++|+|  ++++||||+.|++|+||+.....       .......+...+.+++|+|. +..|++++.||+
T Consensus       479 ~~~~~~~V~~i~fs~--dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~las~~~Dg~  556 (793)
T PLN00181        479 LLNSSNLVCAIGFDR--DGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASSNFEGV  556 (793)
T ss_pred             ccCCCCcEEEEEECC--CCCEEEEEeCCCEEEEEECCcccccccccccceEEecccCceeeEEeccCCCCEEEEEeCCCe
Confidence            446999999999999  99999999999999999975321       01122345578999999874 689999999999


Q ss_pred             EEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC-CCCEEEEEecCCcEEEEECCCCceEEEEEe
Q psy7108         115 LIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA-DGSCILAAGQSKYICIYSSREGILLKKFTI  193 (703)
Q Consensus       115 I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp-dg~~l~s~s~dg~I~lwD~~~~~~~~~~~~  193 (703)
                      |++||+.+++.+..+.+|..                    .|++++|+| ++.+|++|+.|++|++||++++.++..+..
T Consensus       557 v~lWd~~~~~~~~~~~~H~~--------------------~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~  616 (793)
T PLN00181        557 VQVWDVARSQLVTEMKEHEK--------------------RVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT  616 (793)
T ss_pred             EEEEECCCCeEEEEecCCCC--------------------CEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEec
Confidence            99999999998888887765                    899999997 789999999999999999999988877653


Q ss_pred             ccCCccccccccceeeeec-cCCCEEEEEcccCCCCCeeEEECCCCCCCc-cceeecCCccceEEEEEcCCCCEEEEEeC
Q psy7108         194 TQNKSLDGINDFINRRKMT-EFGNVSLIETRETHEGGNVVLKLPGVKKGD-MAARVLKPEVRVFCVKFSPTGQAWVAATT  271 (703)
Q Consensus       194 ~~~~~~~~~~~~v~~~~~s-pdg~~l~~~~~~~~~~~~~~i~iwd~~~~~-~~~~~~~h~~~V~~l~~spdg~~l~s~s~  271 (703)
                      +         ..+.++.|+ ++|..+++++.++      .|++||+++++ ....+.+|...|.++.|. ++..+++++.
T Consensus       617 ~---------~~v~~v~~~~~~g~~latgs~dg------~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~  680 (793)
T PLN00181        617 K---------ANICCVQFPSESGRSLAFGSADH------KVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSST  680 (793)
T ss_pred             C---------CCeEEEEEeCCCCCEEEEEeCCC------eEEEEECCCCCccceEecCCCCCEEEEEEe-CCCEEEEEEC
Confidence            2         257788885 5688888877664      89999998765 456777899999999997 7889999999


Q ss_pred             CC-EEEEEcCCC------ceecc------eeeeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108         272 EG-VHIYSLDSG------YVFDP------FLLDISITPQSVKEALADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       272 Dg-v~iwd~~~~------~~~~~------~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~  321 (703)
                      |+ |++||+..+      ..+..      ....++++|++  .++++|+.++.+.+ |....+
T Consensus       681 D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~--~~lasgs~D~~v~i-w~~~~~  740 (793)
T PLN00181        681 DNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSD--GYIATGSETNEVFV-YHKAFP  740 (793)
T ss_pred             CCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCC--CEEEEEeCCCEEEE-EECCCC
Confidence            99 999998743      22222      23468899998  79999999999998 886543

>KOG0643|consensus

Probab=99.90  E-value=1.1e-22  Score=191.87  Aligned_cols=240  Identities=18%  Similarity=0.277  Sum_probs=181.0

Q ss_pred             eeEEeeecccCCceEEecCC---ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCce
Q psy7108           8 SLIETRETHEGGNVVLKLPG---VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDT   83 (703)
Q Consensus         8 ~~~~~~~~~~~~~~~i~~~~---v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~   83 (703)
                      ++-...+.++|.- +..+..   +.+|- .+|+.+  -++.||++.|+|++.+-  +.+.++||+.|.++++||++++++
T Consensus        12 plTqiKyN~eGDL-lFscaKD~~~~vw~s~nGerl--Gty~GHtGavW~~Did~--~s~~liTGSAD~t~kLWDv~tGk~   86 (327)
T KOG0643|consen   12 PLTQIKYNREGDL-LFSCAKDSTPTVWYSLNGERL--GTYDGHTGAVWCCDIDW--DSKHLITGSADQTAKLWDVETGKQ   86 (327)
T ss_pred             ccceEEecCCCcE-EEEecCCCCceEEEecCCcee--eeecCCCceEEEEEecC--CcceeeeccccceeEEEEcCCCcE
Confidence            3444455555433 333322   45565 599999  99999999999999998  999999999999999999998864


Q ss_pred             eEEE-----------------------------------------------------ecCCCcEEEEEEecCCCEEEEEE
Q psy7108          84 QHET-----------------------------------------------------IQLLSDALCVAYKPDGTEIVVAT  110 (703)
Q Consensus        84 ~~~~-----------------------------------------------------~~~~~~V~~v~~spdg~~las~s  110 (703)
                      +...                                                     ..+.+.++.+.|+|-++.|++|.
T Consensus        87 la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Gh  166 (327)
T KOG0643|consen   87 LATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGH  166 (327)
T ss_pred             EEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEEEEec
Confidence            3221                                                     11233566777888888888888


Q ss_pred             CCCeEEEEEcCCCcEE-EEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEE
Q psy7108         111 LDGQLIMFDVESAAQV-GSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLK  189 (703)
Q Consensus       111 ~dg~I~vwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~  189 (703)
                      .||.|..||+++|+.. .+.+.|                    ...|+.++++||..++++++.|.+-++||+++-++++
T Consensus       167 e~G~is~~da~~g~~~v~s~~~h--------------------~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~K  226 (327)
T KOG0643|consen  167 EDGSISIYDARTGKELVDSDEEH--------------------SSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLK  226 (327)
T ss_pred             CCCcEEEEEcccCceeeechhhh--------------------ccccccccccCCcceEEecccCccceeeeccceeeEE
Confidence            8888888888887543 333333                    3489999999999999999999999999999999999


Q ss_pred             EEEeccCCccccccccceeeeeccCCCEEEEEcccCCC--------CCeeEEECCCCCCCccceeecCCccceEEEEEcC
Q psy7108         190 KFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHE--------GGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSP  261 (703)
Q Consensus       190 ~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~--------~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~sp  261 (703)
                      ++...         .+|++.+++|-...++.+++.+..        .+.-.-++|++-..+.+.+..+|-++|++++|+|
T Consensus       227 ty~te---------~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhP  297 (327)
T KOG0643|consen  227 TYTTE---------RPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHP  297 (327)
T ss_pred             Eeeec---------ccccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcceeEECC
Confidence            98733         479999999988877776643210        1111233444433455677889999999999999


Q ss_pred             CCCEEEEEeCCC-EEEEEcCC
Q psy7108         262 TGQAWVAATTEG-VHIYSLDS  281 (703)
Q Consensus       262 dg~~l~s~s~Dg-v~iwd~~~  281 (703)
                      +|+..++|++|| |++...+.
T Consensus       298 dGksYsSGGEDG~VR~h~Fd~  318 (327)
T KOG0643|consen  298 DGKSYSSGGEDGYVRLHHFDS  318 (327)
T ss_pred             CCcccccCCCCceEEEEEecc
Confidence            999999999999 88876543

>KOG0292|consensus

Probab=99.90  E-value=6e-23  Score=220.51  Aligned_cols=244  Identities=11%  Similarity=0.159  Sum_probs=213.1

Q ss_pred             cccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcC
Q psy7108          42 VLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVE  121 (703)
Q Consensus        42 ~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~  121 (703)
                      .++.-+..|.+++|+|  ...+++++-..|.|++||.+-+..+..+..|.++|..++|+|++..+++|+.|-.|+||+..
T Consensus         4 kfEskSsRvKglsFHP--~rPwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk   81 (1202)
T KOG0292|consen    4 KFESKSSRVKGLSFHP--KRPWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYK   81 (1202)
T ss_pred             hhhcccccccceecCC--CCCEEEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecc
Confidence            4556678899999999  89999999999999999999887778888899999999999999999999999999999999


Q ss_pred             CCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCcccc
Q psy7108         122 SAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDG  201 (703)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~  201 (703)
                      +.+++-++.+|-+                    .|..+.|++.--+|+++|.|.+|+||+..+++++..+++|..     
T Consensus        82 ~rrclftL~GHlD--------------------YVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHnH-----  136 (1202)
T KOG0292|consen   82 TRRCLFTLLGHLD--------------------YVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHNH-----  136 (1202)
T ss_pred             cceehhhhccccc--------------------eeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCce-----
Confidence            9999999999987                    899999999999999999999999999999999999987766     


Q ss_pred             ccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCc-----------------------------cceeecCCcc
Q psy7108         202 INDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGD-----------------------------MAARVLKPEV  252 (703)
Q Consensus       202 ~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~-----------------------------~~~~~~~h~~  252 (703)
                         .|.|..|+|....+++++-+      .+|++||+..-+                             ....+.+|+.
T Consensus       137 ---YVMcAqFhptEDlIVSaSLD------QTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDR  207 (1202)
T KOG0292|consen  137 ---YVMCAQFHPTEDLIVSASLD------QTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDR  207 (1202)
T ss_pred             ---EEEeeccCCccceEEEeccc------ceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeeccccc
Confidence               99999999999988888776      499999975310                             0123558999


Q ss_pred             ceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCce--------ecceeeeEEEccchhhhHhhcCCcceEEEEEEecCchhH
Q psy7108         253 RVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYV--------FDPFLLDISITPQSVKEALADKDYAKALMMSLKLNEQGL  323 (703)
Q Consensus       253 ~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~--------~~~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~~~  323 (703)
                      .|+-++|+|.-..+++|++|. |++|.+...+.        +..-+.++-|+|..  .++.+.+.|+.+++ |+++....
T Consensus       208 GVNwaAfhpTlpliVSG~DDRqVKlWrmnetKaWEvDtcrgH~nnVssvlfhp~q--~lIlSnsEDksirV-wDm~kRt~  284 (1202)
T KOG0292|consen  208 GVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTCRGHYNNVSSVLFHPHQ--DLILSNSEDKSIRV-WDMTKRTS  284 (1202)
T ss_pred             ccceEEecCCcceEEecCCcceeeEEEeccccceeehhhhcccCCcceEEecCcc--ceeEecCCCccEEE-Eecccccc
Confidence            999999999999999999999 99999865443        22334678999988  88999999999999 99876543


Q ss_pred             H
Q psy7108         324 I  324 (703)
Q Consensus       324 ~  324 (703)
                      +
T Consensus       285 v  285 (1202)
T KOG0292|consen  285 V  285 (1202)
T ss_pred             e
Confidence            3

>KOG0278|consensus

Probab=99.90  E-value=1.1e-23  Score=196.41  Aligned_cols=244  Identities=17%  Similarity=0.278  Sum_probs=208.9

Q ss_pred             cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECC
Q psy7108          33 MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLD  112 (703)
Q Consensus        33 ~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~d  112 (703)
                      .||.-+  -++.||.+.|++...+.  +...-|+++.|=+-++||.-++.. ...+.|..-|.+++|+.|.++|++|+.+
T Consensus        47 ~tgdwi--gtfeghkgavw~~~l~~--na~~aasaaadftakvw~a~tgde-lhsf~hkhivk~~af~~ds~~lltgg~e  121 (334)
T KOG0278|consen   47 DTGDWI--GTFEGHKGAVWSATLNK--NATRAASAAADFTAKVWDAVTGDE-LHSFEHKHIVKAVAFSQDSNYLLTGGQE  121 (334)
T ss_pred             CCCCcE--EeeeccCcceeeeecCc--hhhhhhhhcccchhhhhhhhhhhh-hhhhhhhheeeeEEecccchhhhccchH
Confidence            466777  89999999999999998  888899999999999999988854 4456788899999999999999999999


Q ss_pred             CeEEEEEcCCCc-EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEE
Q psy7108         113 GQLIMFDVESAA-QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKF  191 (703)
Q Consensus       113 g~I~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~  191 (703)
                      +.++|+|++..+ +...+.+                    |.+.|..+.|....+.|++++.|++|++||.++++.++++
T Consensus       122 kllrvfdln~p~App~E~~g--------------------htg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL  181 (334)
T KOG0278|consen  122 KLLRVFDLNRPKAPPKEISG--------------------HTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSL  181 (334)
T ss_pred             HHhhhhhccCCCCCchhhcC--------------------CCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEE
Confidence            999999997653 2333444                    4558999999999999999999999999999999999988


Q ss_pred             EeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeC
Q psy7108         192 TITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATT  271 (703)
Q Consensus       192 ~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~  271 (703)
                      ..         +..|+++.++++|+++.++-..       .|++||..+...+....- ...|.+.+.+|+...+++|++
T Consensus       182 ~~---------~s~VtSlEvs~dG~ilTia~gs-------sV~Fwdaksf~~lKs~k~-P~nV~SASL~P~k~~fVaGge  244 (334)
T KOG0278|consen  182 EF---------NSPVTSLEVSQDGRILTIAYGS-------SVKFWDAKSFGLLKSYKM-PCNVESASLHPKKEFFVAGGE  244 (334)
T ss_pred             ec---------CCCCcceeeccCCCEEEEecCc-------eeEEeccccccceeeccC-ccccccccccCCCceEEecCc
Confidence            73         3478999999999988776653       799999998877655443 356889999999999999999


Q ss_pred             CC-EEEEEcCCCceecce-------eeeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108         272 EG-VHIYSLDSGYVFDPF-------LLDISITPQSVKEALADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       272 Dg-v~iwd~~~~~~~~~~-------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~  321 (703)
                      |. ++.||..++..+..+       +.++.|+|+|  ..-++|+.|+++++ |..+..
T Consensus       245 d~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdG--E~yAsGSEDGTirl-WQt~~~  299 (334)
T KOG0278|consen  245 DFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDG--ELYASGSEDGTIRL-WQTTPG  299 (334)
T ss_pred             ceEEEEEeccCCceeeecccCCCCceEEEEECCCC--ceeeccCCCceEEE-EEecCC
Confidence            99 999999999887665       4789999999  89999999999999 987644

>KOG0277|consensus

Probab=99.90  E-value=7.6e-23  Score=191.62  Aligned_cols=216  Identities=17%  Similarity=0.236  Sum_probs=179.1

Q ss_pred             ceeec--cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecC-CC
Q psy7108          28 VKKGD--MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPD-GT  104 (703)
Q Consensus        28 v~~~d--~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spd-g~  104 (703)
                      +++||  ...+++  +.++.|...|.++.|++. ++..++++|+|++|++|+...++.+..+.+|..-|...+|+|. .+
T Consensus        85 Lrl~d~~~~s~Pi--~~~kEH~~EV~Svdwn~~-~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~n  161 (311)
T KOG0277|consen   85 LRLFDLTMPSKPI--HKFKEHKREVYSVDWNTV-RRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPN  161 (311)
T ss_pred             EEEeccCCCCcch--hHHHhhhhheEEeccccc-cceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCC
Confidence            44455  234566  899999999999999996 7888899999999999999888888888899999999999995 57


Q ss_pred             EEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC-CCCEEEEEecCCcEEEEECC
Q psy7108         105 EIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA-DGSCILAAGQSKYICIYSSR  183 (703)
Q Consensus       105 ~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp-dg~~l~s~s~dg~I~lwD~~  183 (703)
                      .+++++.|+++++||++.......++.|..                    .+.++.|+. +...+++|+.|+.|+.||++
T Consensus       162 lfas~Sgd~~l~lwdvr~~gk~~~i~ah~~--------------------Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir  221 (311)
T KOG0277|consen  162 LFASASGDGTLRLWDVRSPGKFMSIEAHNS--------------------EILCCDWSKYNHNVLATGGVDNLVRGWDIR  221 (311)
T ss_pred             eEEEccCCceEEEEEecCCCceeEEEeccc--------------------eeEeecccccCCcEEEecCCCceEEEEehh
Confidence            899999999999999987655555877764                    799999987 66788899999999999999


Q ss_pred             CCc-eEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCc-cceeecCCccceEEEEEcC
Q psy7108         184 EGI-LLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGD-MAARVLKPEVRVFCVKFSP  261 (703)
Q Consensus       184 ~~~-~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~-~~~~~~~h~~~V~~l~~sp  261 (703)
                      +-+ ++..        +.+|.-.|..++|||....++++++.+     .++++||...+. .+.+...|..-+..+.||+
T Consensus       222 ~~r~pl~e--------L~gh~~AVRkvk~Sph~~~lLaSasYD-----mT~riw~~~~~ds~~e~~~~HtEFv~g~Dws~  288 (311)
T KOG0277|consen  222 NLRTPLFE--------LNGHGLAVRKVKFSPHHASLLASASYD-----MTVRIWDPERQDSAIETVDHHTEFVCGLDWSL  288 (311)
T ss_pred             hcccccee--------ecCCceEEEEEecCcchhhHhhhcccc-----ceEEecccccchhhhhhhhccceEEecccccc
Confidence            743 3333        345666999999999988777777654     699999988654 4555667888899999998


Q ss_pred             -CCCEEEEEeCCC-EEEEEc
Q psy7108         262 -TGQAWVAATTEG-VHIYSL  279 (703)
Q Consensus       262 -dg~~l~s~s~Dg-v~iwd~  279 (703)
                       ++.++|+++.|+ ++||+-
T Consensus       289 ~~~~~vAs~gWDe~l~Vw~p  308 (311)
T KOG0277|consen  289 FDPGQVASTGWDELLYVWNP  308 (311)
T ss_pred             ccCceeeecccccceeeecc
Confidence             456889999999 999984

>KOG0313|consensus

Probab=99.90  E-value=2.3e-22  Score=198.23  Aligned_cols=228  Identities=17%  Similarity=0.268  Sum_probs=188.0

Q ss_pred             eecccCCceEEecCCceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCC-----------
Q psy7108          13 RETHEGGNVVLKLPGVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVET-----------   81 (703)
Q Consensus        13 ~~~~~~~~~~i~~~~v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~-----------   81 (703)
                      .|...+.+..+++|.....+.--+++  .+..||...|-+++..+  +|..++|||.|.++++|+.++.           
T Consensus       161 ~fvsas~Dqtl~Lw~~~~~~~~~~~~--~~~~GHk~~V~sVsv~~--sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~  236 (423)
T KOG0313|consen  161 LFVSASMDQTLRLWKWNVGENKVKAL--KVCRGHKRSVDSVSVDS--SGTRFCSGSWDTMLKIWSVETDEEDELESSSNR  236 (423)
T ss_pred             eEEEecCCceEEEEEecCchhhhhHH--hHhcccccceeEEEecC--CCCeEEeecccceeeecccCCCccccccccchh
Confidence            35556677777777655444334445  55669999999999999  9999999999999999993221           


Q ss_pred             --------------ceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchh
Q psy7108          82 --------------DTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTR  147 (703)
Q Consensus        82 --------------~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (703)
                                    .....+.+|.++|.++.|++ ...+++++.|.+|+.||+.++....++.+..              
T Consensus       237 rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~~~~~~~~k--------------  301 (423)
T KOG0313|consen  237 RRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGLKSTLTTNK--------------  301 (423)
T ss_pred             hhhhhhhhhcccccCceEEecccccceeeEEEcC-CCceEeecccceEEEEEeecccceeeeecCc--------------
Confidence                          12344557999999999998 6789999999999999999999988887765              


Q ss_pred             hcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCce---EEEEEeccCCccccccccceeeeeccCCCEEEEEccc
Q psy7108         148 EQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGIL---LKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRE  224 (703)
Q Consensus       148 ~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~---~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~  224 (703)
                             .+.++.++|..++|++|+.|..|++||.+++.-   ..++        .+|..+|.++.|+|...+.+++++.
T Consensus       302 -------sl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~--------~gH~nwVssvkwsp~~~~~~~S~S~  366 (423)
T KOG0313|consen  302 -------SLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSL--------IGHKNWVSSVKWSPTNEFQLVSGSY  366 (423)
T ss_pred             -------ceeEeecccccceeeecCCCCceeecCCCCCCCceeEEee--------ecchhhhhheecCCCCceEEEEEec
Confidence                   689999999999999999999999999998632   2333        4555699999999999988887765


Q ss_pred             CCCCCeeEEECCCCCCCc-cceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcC
Q psy7108         225 THEGGNVVLKLPGVKKGD-MAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLD  280 (703)
Q Consensus       225 ~~~~~~~~i~iwd~~~~~-~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~  280 (703)
                      +     +++++||+++.. ++..+.+|...|.++.|+ ++..+++|+.|. ++|+.-.
T Consensus       367 D-----~t~klWDvRS~k~plydI~~h~DKvl~vdW~-~~~~IvSGGaD~~l~i~~~~  418 (423)
T KOG0313|consen  367 D-----NTVKLWDVRSTKAPLYDIAGHNDKVLSVDWN-EGGLIVSGGADNKLRIFKGS  418 (423)
T ss_pred             C-----CeEEEEEeccCCCcceeeccCCceEEEEecc-CCceEEeccCcceEEEeccc
Confidence            4     589999999877 899999999999999997 566899999999 9998743

>KOG0268|consensus

Probab=99.90  E-value=6.2e-23  Score=200.97  Aligned_cols=259  Identities=17%  Similarity=0.210  Sum_probs=202.4

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEc
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDV  120 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~  120 (703)
                      ..|.||.+.|.|++=+|. .-..++||+.||.|+|||+...++...+..|.+.|..+++..  ..++++++|++|+.|.+
T Consensus        60 ~~L~gHrdGV~~lakhp~-~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~--~~~~tvgdDKtvK~wk~  136 (433)
T KOG0268|consen   60 GSLDGHRDGVSCLAKHPN-KLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ--TSFFTVGDDKTVKQWKI  136 (433)
T ss_pred             hhccccccccchhhcCcc-hhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecc--cceEEecCCcceeeeec
Confidence            567999999999999992 337899999999999999999988889999999999999986  67889999999999987


Q ss_pred             CCCcEEEEEeccccCCCCC------------CCC-------ccchhhcccCCccEEEEEEcCCCC-EEEEEecCCcEEEE
Q psy7108         121 ESAAQVGSVEARRDLDSGR------------LDT-------DLVTREQSLKAKAVSTVCYSADGS-CILAAGQSKYICIY  180 (703)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~------------~~~-------~~~~~~~~~~~~~V~~i~~spdg~-~l~s~s~dg~I~lw  180 (703)
                      +. ..++++.+...+.+-.            ...       +.+..........+.++.|+|... .|++|+.|+.|.+|
T Consensus       137 ~~-~p~~tilg~s~~~gIdh~~~~~~FaTcGe~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLy  215 (433)
T KOG0268|consen  137 DG-PPLHTILGKSVYLGIDHHRKNSVFATCGEQIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLY  215 (433)
T ss_pred             cC-CcceeeeccccccccccccccccccccCceeeecccccCCccceeecCCCceeEEecCCCcchheeeeccCCceEEE
Confidence            64 3555555433221110            001       111122233456789999999654 45667799999999


Q ss_pred             ECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC-ccceeecCCccceEEEEE
Q psy7108         181 SSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG-DMAARVLKPEVRVFCVKF  259 (703)
Q Consensus       181 D~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~-~~~~~~~~h~~~V~~l~~  259 (703)
                      |++++.+++.....         ..-+.++|+|. .+.+++++.+     ..++.+|++.- .++....+|...|.+++|
T Consensus       216 D~R~~~Pl~KVi~~---------mRTN~IswnPe-afnF~~a~ED-----~nlY~~DmR~l~~p~~v~~dhvsAV~dVdf  280 (433)
T KOG0268|consen  216 DLRQASPLKKVILT---------MRTNTICWNPE-AFNFVAANED-----HNLYTYDMRNLSRPLNVHKDHVSAVMDVDF  280 (433)
T ss_pred             ecccCCccceeeee---------ccccceecCcc-ccceeecccc-----ccceehhhhhhcccchhhcccceeEEEecc
Confidence            99999988776522         24578999994 4444444433     57999999865 567777889999999999


Q ss_pred             cCCCCEEEEEeCCC-EEEEEcCCCceecce-------eeeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108         260 SPTGQAWVAATTEG-VHIYSLDSGYVFDPF-------LLDISITPQSVKEALADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       260 spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~-------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~  321 (703)
                      ||.|+.+++||.|. |+||..+.+...+.+       +.++.||.|.  .++.+|+.++.+++ |+.+..
T Consensus       281 sptG~EfvsgsyDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~Ds--kyi~SGSdd~nvRl-Wka~As  347 (433)
T KOG0268|consen  281 SPTGQEFVSGSYDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMDS--KYIISGSDDGNVRL-WKAKAS  347 (433)
T ss_pred             CCCcchhccccccceEEEeecCCCcchhhhhHhhhheeeEEEEeccc--cEEEecCCCcceee-eecchh
Confidence            99999999999999 999999988765444       4789999999  99999999999999 987644

>KOG0306|consensus

Probab=99.89  E-value=6.7e-22  Score=209.67  Aligned_cols=264  Identities=11%  Similarity=0.161  Sum_probs=217.7

Q ss_pred             ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEE
Q psy7108          28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEI  106 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~l  106 (703)
                      +++|+ .+.+|+  +++..-  -+.|..|.|  .+.++++|...|.+.++|+.+...+.....|.+.+.+++.+||++.+
T Consensus       396 ikiWn~~t~kci--RTi~~~--y~l~~~Fvp--gd~~Iv~G~k~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~pD~~g~  469 (888)
T KOG0306|consen  396 IKIWNRDTLKCI--RTITCG--YILASKFVP--GDRYIVLGTKNGELQVFDLASASLVETIRAHDGAIWSISLSPDNKGF  469 (888)
T ss_pred             EEEEEccCccee--EEeccc--cEEEEEecC--CCceEEEeccCCceEEEEeehhhhhhhhhccccceeeeeecCCCCce
Confidence            55666 369999  888743  889999999  89999999999999999999887777777899999999999999999


Q ss_pred             EEEECCCeEEEEEcCC-----CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEE
Q psy7108         107 VVATLDGQLIMFDVES-----AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYS  181 (703)
Q Consensus       107 as~s~dg~I~vwd~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD  181 (703)
                      ++|+.|.+|++||..-     |...+.+.-+..             ..-.-...|.|+++||||++|+++--|+++++|-
T Consensus       470 vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~-------------rtLel~ddvL~v~~Spdgk~LaVsLLdnTVkVyf  536 (888)
T KOG0306|consen  470 VTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHT-------------RTLELEDDVLCVSVSPDGKLLAVSLLDNTVKVYF  536 (888)
T ss_pred             EEecCCcEEEEEeEEEEeccCcccceeeeeccc-------------eEEeccccEEEEEEcCCCcEEEEEeccCeEEEEE
Confidence            9999999999999741     211111111110             0111234799999999999999999999999999


Q ss_pred             CCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcC
Q psy7108         182 SREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSP  261 (703)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~sp  261 (703)
                      +.+-+....+-+        |.-+|.|+..|||++.+++++.+      +.|++|.+.=|.|...+.+|+..|.++.|.|
T Consensus       537 lDtlKFflsLYG--------HkLPV~smDIS~DSklivTgSAD------KnVKiWGLdFGDCHKS~fAHdDSvm~V~F~P  602 (888)
T KOG0306|consen  537 LDTLKFFLSLYG--------HKLPVLSMDISPDSKLIVTGSAD------KNVKIWGLDFGDCHKSFFAHDDSVMSVQFLP  602 (888)
T ss_pred             ecceeeeeeecc--------cccceeEEeccCCcCeEEeccCC------CceEEeccccchhhhhhhcccCceeEEEEcc
Confidence            998776665554        55599999999999999988876      5899999999999999999999999999999


Q ss_pred             CCCEEEEEeCCC-EEEEEcCCCceecce------eeeEEEccchhhhHhhcCCcceEEEEEEecCchhHHHHH
Q psy7108         262 TGQAWVAATTEG-VHIYSLDSGYVFDPF------LLDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIHV  327 (703)
Q Consensus       262 dg~~l~s~s~Dg-v~iwd~~~~~~~~~~------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~~~~~~v  327 (703)
                      ....+.+++.|+ ++-||-+.-..++.+      .++++++|+|  .++.+++.|..+++ |...+..++.+.
T Consensus       603 ~~~~FFt~gKD~kvKqWDg~kFe~iq~L~~H~~ev~cLav~~~G--~~vvs~shD~sIRl-wE~tde~~~lEe  672 (888)
T KOG0306|consen  603 KTHLFFTCGKDGKVKQWDGEKFEEIQKLDGHHSEVWCLAVSPNG--SFVVSSSHDKSIRL-WERTDEILILEE  672 (888)
T ss_pred             cceeEEEecCcceEEeechhhhhhheeeccchheeeeeEEcCCC--CeEEeccCCceeEe-eeccCcceeeeh
Confidence            999999999999 999997766555444      4789999999  89999999999999 887765544443

>KOG0283|consensus

Probab=99.89  E-value=1.7e-22  Score=218.52  Aligned_cols=237  Identities=13%  Similarity=0.224  Sum_probs=191.1

Q ss_pred             ccc-CCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCC--------------------------------Cc------
Q psy7108          42 VLS-GHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVE--------------------------------TD------   82 (703)
Q Consensus        42 ~l~-gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~--------------------------------~~------   82 (703)
                      -+. +|.+.|.++.||+  ||++|||||.|+.||||.+..                                ..      
T Consensus       261 e~~~ah~gaIw~mKFS~--DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~  338 (712)
T KOG0283|consen  261 EISNAHKGAIWAMKFSH--DGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSS  338 (712)
T ss_pred             ccccccCCcEEEEEeCC--CCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccc
Confidence            345 8999999999999  999999999999999998755                                00      


Q ss_pred             ----------------------eeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCC
Q psy7108          83 ----------------------TQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRL  140 (703)
Q Consensus        83 ----------------------~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~  140 (703)
                                            ....+.+|.+.|.++.||.+ .+|++++.|++|++|++...++++.|...        
T Consensus       339 ~~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn-~fLLSSSMDKTVRLWh~~~~~CL~~F~Hn--------  409 (712)
T KOG0283|consen  339 SRKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKN-NFLLSSSMDKTVRLWHPGRKECLKVFSHN--------  409 (712)
T ss_pred             cccccCCccccCCCccccccccchhhhhccchhheecccccC-CeeEeccccccEEeecCCCcceeeEEecC--------
Confidence                                  11223467889999999965 58999999999999999999999998653        


Q ss_pred             CCccchhhcccCCccEEEEEEcC-CCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEE
Q psy7108         141 DTDLVTREQSLKAKAVSTVCYSA-DGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSL  219 (703)
Q Consensus       141 ~~~~~~~~~~~~~~~V~~i~~sp-dg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~  219 (703)
                                   +.|+|++|+| |.+++++|+-|+.|+||++...+.+.-..         ..+.|+.++++|||+..+
T Consensus       410 -------------dfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~D---------l~~lITAvcy~PdGk~av  467 (712)
T KOG0283|consen  410 -------------DFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWND---------LRDLITAVCYSPDGKGAV  467 (712)
T ss_pred             -------------CeeEEEEecccCCCcEeecccccceEEeecCcCeeEeehh---------hhhhheeEEeccCCceEE
Confidence                         3899999999 88999999999999999999876654433         224899999999999999


Q ss_pred             EEcccCCCCCeeEEECCCCCCCccceeec---------CCccceEEEEEcCCCC-EEEEEeCCC-EEEEEcCCCceecce
Q psy7108         220 IETRETHEGGNVVLKLPGVKKGDMAARVL---------KPEVRVFCVKFSPTGQ-AWVAATTEG-VHIYSLDSGYVFDPF  288 (703)
Q Consensus       220 ~~~~~~~~~~~~~i~iwd~~~~~~~~~~~---------~h~~~V~~l~~spdg~-~l~s~s~Dg-v~iwd~~~~~~~~~~  288 (703)
                      +++-.|      .+++|+....+......         .|. .|+++.|.|... .+++.++|. |+|||.....++..+
T Consensus       468 IGt~~G------~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~-rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~Kf  540 (712)
T KOG0283|consen  468 IGTFNG------YCRFYDTEGLKLVSDFHIRLHNKKKKQGK-RITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKF  540 (712)
T ss_pred             EEEecc------EEEEEEccCCeEEEeeeEeeccCccccCc-eeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhh
Confidence            999875      78899877665433221         133 799999997543 467777787 999999776665555


Q ss_pred             e--------eeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108         289 L--------LDISITPQSVKEALADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       289 ~--------~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~  321 (703)
                      .        ....|+.||  ..+.+++.|.-+-+ |+...+
T Consensus       541 KG~~n~~SQ~~Asfs~Dg--k~IVs~seDs~VYi-W~~~~~  578 (712)
T KOG0283|consen  541 KGFRNTSSQISASFSSDG--KHIVSASEDSWVYI-WKNDSF  578 (712)
T ss_pred             cccccCCcceeeeEccCC--CEEEEeecCceEEE-EeCCCC
Confidence            3        457899999  88999998888888 998654

>KOG0640|consensus

Probab=99.89  E-value=1.3e-22  Score=194.67  Aligned_cols=218  Identities=13%  Similarity=0.271  Sum_probs=182.6

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCC------------C------ceeEEEecCCCcEEEEEEecC
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVE------------T------DTQHETIQLLSDALCVAYKPD  102 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~------------~------~~~~~~~~~~~~V~~v~~spd  102 (703)
                      ..++.|++++.+.+|+|  ||.++||||.|..|+|.|++.            +      ..++.+..|.++|+++.|+|.
T Consensus       106 ~ylt~HK~~cR~aafs~--DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPr  183 (430)
T KOG0640|consen  106 KYLTSHKSPCRAAAFSP--DGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPR  183 (430)
T ss_pred             EEEeecccceeeeeeCC--CCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecch
Confidence            46789999999999999  999999999999999999861            1      123556679999999999999


Q ss_pred             CCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEEC
Q psy7108         103 GTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSS  182 (703)
Q Consensus       103 g~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~  182 (703)
                      ...|++|+.|++|+++|.......+.++.-.+                  ..+|.++.|+|.|.+|++|....++++||+
T Consensus       184 e~ILiS~srD~tvKlFDfsK~saKrA~K~~qd------------------~~~vrsiSfHPsGefllvgTdHp~~rlYdv  245 (430)
T KOG0640|consen  184 ETILISGSRDNTVKLFDFSKTSAKRAFKVFQD------------------TEPVRSISFHPSGEFLLVGTDHPTLRLYDV  245 (430)
T ss_pred             hheEEeccCCCeEEEEecccHHHHHHHHHhhc------------------cceeeeEeecCCCceEEEecCCCceeEEec
Confidence            99999999999999999975432222211111                  227999999999999999999999999999


Q ss_pred             CCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC-Cc-cceEEEEEc
Q psy7108         183 REGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK-PE-VRVFCVKFS  260 (703)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~-h~-~~V~~l~~s  260 (703)
                      .+.+|...-.     .-+.|.+.|+++.+++.|+.+++++.+|      .|++||--+++++..+.. |. ..|.+..|.
T Consensus       246 ~T~Qcfvsan-----Pd~qht~ai~~V~Ys~t~~lYvTaSkDG------~IklwDGVS~rCv~t~~~AH~gsevcSa~Ft  314 (430)
T KOG0640|consen  246 NTYQCFVSAN-----PDDQHTGAITQVRYSSTGSLYVTASKDG------AIKLWDGVSNRCVRTIGNAHGGSEVCSAVFT  314 (430)
T ss_pred             cceeEeeecC-----cccccccceeEEEecCCccEEEEeccCC------cEEeeccccHHHHHHHHhhcCCceeeeEEEc
Confidence            9988865433     3356888999999999999999988875      899999989999887764 54 469999999


Q ss_pred             CCCCEEEEEeCCC-EEEEEcCCCceeccee
Q psy7108         261 PTGQAWVAATTEG-VHIYSLDSGYVFDPFL  289 (703)
Q Consensus       261 pdg~~l~s~s~Dg-v~iwd~~~~~~~~~~~  289 (703)
                      .+|+++++.+.|. +++|.+.+++.+..+.
T Consensus       315 kn~kyiLsSG~DS~vkLWEi~t~R~l~~Yt  344 (430)
T KOG0640|consen  315 KNGKYILSSGKDSTVKLWEISTGRMLKEYT  344 (430)
T ss_pred             cCCeEEeecCCcceeeeeeecCCceEEEEe
Confidence            9999999999999 9999999998876653

>KOG1407|consensus

Probab=99.89  E-value=1.3e-21  Score=184.06  Aligned_cols=221  Identities=15%  Similarity=0.200  Sum_probs=189.3

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEc
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDV  120 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~  120 (703)
                      -...||.+.|-.++|+|. ..+++++++.|++|++||+..++++..+.... .=.-+.|+|+|+++++++.|..|...|.
T Consensus        58 ~~~~gh~~svdql~w~~~-~~d~~atas~dk~ir~wd~r~~k~~~~i~~~~-eni~i~wsp~g~~~~~~~kdD~it~id~  135 (313)
T KOG1407|consen   58 LVYRGHTDSVDQLCWDPK-HPDLFATASGDKTIRIWDIRSGKCTARIETKG-ENINITWSPDGEYIAVGNKDDRITFIDA  135 (313)
T ss_pred             hcccCCCcchhhheeCCC-CCcceEEecCCceEEEEEeccCcEEEEeeccC-cceEEEEcCCCCEEEEecCcccEEEEEe
Confidence            457899999999999996 88999999999999999999987766655443 4456789999999999999999999999


Q ss_pred             CCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccc
Q psy7108         121 ESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLD  200 (703)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~  200 (703)
                      ++.+.....+-..                     .+..++|+-++.+++..+..|+|.|.....-+++..++.|.     
T Consensus       136 r~~~~~~~~~~~~---------------------e~ne~~w~~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~-----  189 (313)
T KOG1407|consen  136 RTYKIVNEEQFKF---------------------EVNEISWNNSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHP-----  189 (313)
T ss_pred             cccceeehhcccc---------------------eeeeeeecCCCCEEEEecCCceEEEEeccccccccccccCC-----
Confidence            9887766554433                     57889999888888877778999999998888887776555     


Q ss_pred             cccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEc
Q psy7108         201 GINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSL  279 (703)
Q Consensus       201 ~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~  279 (703)
                         ....++.|+|+|+++++++.+      ..+.+||+..--+.+.+..++.+|..+.||.||++||+|++|- |-|=++
T Consensus       190 ---snCicI~f~p~GryfA~GsAD------AlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~v  260 (313)
T KOG1407|consen  190 ---SNCICIEFDPDGRYFATGSAD------ALVSLWDVDELICERCISRLDWPVRTLSFSHDGRMLASASEDHFIDIAEV  260 (313)
T ss_pred             ---cceEEEEECCCCceEeecccc------ceeeccChhHhhhheeeccccCceEEEEeccCcceeeccCccceEEeEec
Confidence               477889999999999998877      3899999999889999999999999999999999999999999 889999


Q ss_pred             CCCceeccee-----eeEEEccch
Q psy7108         280 DSGYVFDPFL-----LDISITPQS  298 (703)
Q Consensus       280 ~~~~~~~~~~-----~~~~~spd~  298 (703)
                      ++|..+-...     ..++|+|..
T Consensus       261 etGd~~~eI~~~~~t~tVAWHPk~  284 (313)
T KOG1407|consen  261 ETGDRVWEIPCEGPTFTVAWHPKR  284 (313)
T ss_pred             ccCCeEEEeeccCCceeEEecCCC
Confidence            9998765443     579999987

>KOG0283|consensus

Probab=99.89  E-value=5.9e-22  Score=214.25  Aligned_cols=211  Identities=21%  Similarity=0.324  Sum_probs=173.3

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEec-CCCEEEEEECCCeEEEEE
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKP-DGTEIVVATLDGQLIMFD  119 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~sp-dg~~las~s~dg~I~vwd  119 (703)
                      +.+.||.+.|.++.||.   .++|+|+|.|+|||||++... .+..++.|.+-|+||+|+| |.+++++|+.|+.|+||+
T Consensus       363 ~ef~GHt~DILDlSWSK---n~fLLSSSMDKTVRLWh~~~~-~CL~~F~HndfVTcVaFnPvDDryFiSGSLD~KvRiWs  438 (712)
T KOG0283|consen  363 CEFKGHTADILDLSWSK---NNFLLSSSMDKTVRLWHPGRK-ECLKVFSHNDFVTCVAFNPVDDRYFISGSLDGKVRLWS  438 (712)
T ss_pred             hhhhccchhheeccccc---CCeeEeccccccEEeecCCCc-ceeeEEecCCeeEEEEecccCCCcEeecccccceEEee
Confidence            66789999999999995   689999999999999999755 5677889999999999999 668999999999999999


Q ss_pred             cCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCcc
Q psy7108         120 VESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSL  199 (703)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~  199 (703)
                      +...+.+.-.+.+.                     -|++++|.|||+..++|+-+|.+++|+....+....+..+.....
T Consensus       439 I~d~~Vv~W~Dl~~---------------------lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~K  497 (712)
T KOG0283|consen  439 ISDKKVVDWNDLRD---------------------LITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKK  497 (712)
T ss_pred             cCcCeeEeehhhhh---------------------hheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCc
Confidence            98887776555543                     699999999999999999999999999998887776655433222


Q ss_pred             ccccccceeeeeccCCC-EEEEEcccCCCCCeeEEECCCCCCCccceeecCCc--cceEEEEEcCCCCEEEEEeCCC-EE
Q psy7108         200 DGINDFINRRKMTEFGN-VSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPE--VRVFCVKFSPTGQAWVAATTEG-VH  275 (703)
Q Consensus       200 ~~~~~~v~~~~~spdg~-~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~--~~V~~l~~spdg~~l~s~s~Dg-v~  275 (703)
                      ......|+.+.|.|... .+++++.+      ..|+|+|.+..+++..+.++.  ..-....|+.||++++++++|. |+
T Consensus       498 k~~~~rITG~Q~~p~~~~~vLVTSnD------SrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seDs~VY  571 (712)
T KOG0283|consen  498 KKQGKRITGLQFFPGDPDEVLVTSND------SRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGKHIVSASEDSWVY  571 (712)
T ss_pred             cccCceeeeeEecCCCCCeEEEecCC------CceEEEeccchhhhhhhcccccCCcceeeeEccCCCEEEEeecCceEE
Confidence            22223799999987655 34555544      389999998888888888643  2345678999999999999999 99


Q ss_pred             EEEcCCC
Q psy7108         276 IYSLDSG  282 (703)
Q Consensus       276 iwd~~~~  282 (703)
                      ||+.+..
T Consensus       572 iW~~~~~  578 (712)
T KOG0283|consen  572 IWKNDSF  578 (712)
T ss_pred             EEeCCCC
Confidence            9998643

>KOG0277|consensus

Probab=99.89  E-value=5.4e-22  Score=185.95  Aligned_cols=236  Identities=12%  Similarity=0.143  Sum_probs=192.4

Q ss_pred             CCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc-eeEEEecCCCcEEEEEEecCC-CEEEEEECCCeEEEEEcCCC
Q psy7108          46 HEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD-TQHETIQLLSDALCVAYKPDG-TEIVVATLDGQLIMFDVESA  123 (703)
Q Consensus        46 H~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~-~~~~~~~~~~~V~~v~~spdg-~~las~s~dg~I~vwd~~~~  123 (703)
                      -.+.+..++|++. ..+.+++++.||++++||..... .+.....|...|.++.|++.. ..+++++.|++|++|+...+
T Consensus        59 ~~D~LfdV~Wse~-~e~~~~~a~GDGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~  137 (311)
T KOG0277|consen   59 TEDGLFDVAWSEN-HENQVIAASGDGSLRLFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRP  137 (311)
T ss_pred             cccceeEeeecCC-CcceEEEEecCceEEEeccCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCC
Confidence            3678999999995 67889999999999999975443 445566799999999999854 56788899999999999999


Q ss_pred             cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC-CCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccc
Q psy7108         124 AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA-DGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGI  202 (703)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp-dg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~  202 (703)
                      +.+.++.+|..                    .|...+|+| ..+.+++++.|+++++||++..-....+..|.       
T Consensus       138 ~Sv~Tf~gh~~--------------------~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~-------  190 (311)
T KOG0277|consen  138 NSVQTFNGHNS--------------------CIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHN-------  190 (311)
T ss_pred             cceEeecCCcc--------------------EEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEecc-------
Confidence            99999999876                    899999999 57899999999999999998743333355444       


Q ss_pred             cccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC-ccceeecCCccceEEEEEcCCC-CEEEEEeCCC-EEEEEc
Q psy7108         203 NDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG-DMAARVLKPEVRVFCVKFSPTG-QAWVAATTEG-VHIYSL  279 (703)
Q Consensus       203 ~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~-~~~~~~~~h~~~V~~l~~spdg-~~l~s~s~Dg-v~iwd~  279 (703)
                       ..+.++.|+.....++++++.+     +.|+.||+++- .++..+.+|.-.|..+.|||.. ..|++++.|- ++||+.
T Consensus       191 -~Eil~cdw~ky~~~vl~Tg~vd-----~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~  264 (311)
T KOG0277|consen  191 -SEILCCDWSKYNHNVLATGGVD-----NLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDP  264 (311)
T ss_pred             -ceeEeecccccCCcEEEecCCC-----ceEEEEehhhccccceeecCCceEEEEEecCcchhhHhhhccccceEEeccc
Confidence             4788999998887776665543     58999999875 4677788999999999999975 4579999999 999998


Q ss_pred             CCCc-------eecceeeeEEEccchhhhHhhcCCcceEEEEEEe
Q psy7108         280 DSGY-------VFDPFLLDISITPQSVKEALADKDYAKALMMSLK  317 (703)
Q Consensus       280 ~~~~-------~~~~~~~~~~~spd~~~~~l~sg~~~~~l~la~~  317 (703)
                      ..+.       .+.+|...++|++. ....+++.++|..+.+ |.
T Consensus       265 ~~~ds~~e~~~~HtEFv~g~Dws~~-~~~~vAs~gWDe~l~V-w~  307 (311)
T KOG0277|consen  265 ERQDSAIETVDHHTEFVCGLDWSLF-DPGQVASTGWDELLYV-WN  307 (311)
T ss_pred             ccchhhhhhhhccceEEeccccccc-cCceeeecccccceee-ec
Confidence            7432       35667778888875 2367899999998887 65

>KOG0305|consensus

Probab=99.89  E-value=1.2e-21  Score=207.00  Aligned_cols=261  Identities=17%  Similarity=0.233  Sum_probs=212.7

Q ss_pred             ceEEecC-Cceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEec-CCCcEEE
Q psy7108          20 NVVLKLP-GVKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQ-LLSDALC   96 (703)
Q Consensus        20 ~~~i~~~-~v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~-~~~~V~~   96 (703)
                      .+.+.+. .+..|+ .+|+..  .....+...|+++.|++  +|.+|+.|..+|.|.|||..+.+.+..... |...|.+
T Consensus       190 ~laValg~~vylW~~~s~~v~--~l~~~~~~~vtSv~ws~--~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~  265 (484)
T KOG0305|consen  190 VLAVALGQSVYLWSASSGSVT--ELCSFGEELVTSVKWSP--DGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGS  265 (484)
T ss_pred             eEEEEecceEEEEecCCCceE--EeEecCCCceEEEEECC--CCCEEEEeecCCeEEEEehhhccccccccCCcCceeEE
Confidence            3444443 366676 456655  45555589999999999  999999999999999999998888888777 9999999


Q ss_pred             EEEecCCCEEEEEECCCeEEEEEcCCCcEEEE-EeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCC
Q psy7108          97 VAYKPDGTEIVVATLDGQLIMFDVESAAQVGS-VEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSK  175 (703)
Q Consensus        97 v~~spdg~~las~s~dg~I~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg  175 (703)
                      ++|.  +..+.+|+.|+.|..+|++..+.... +.+|..                    .|..++|++|++++++|+.|+
T Consensus       266 laW~--~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~q--------------------eVCgLkws~d~~~lASGgnDN  323 (484)
T KOG0305|consen  266 LAWN--SSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQ--------------------EVCGLKWSPDGNQLASGGNDN  323 (484)
T ss_pred             Eecc--CceEEEecCCCcEEEEEEecchhhhhhhhcccc--------------------eeeeeEECCCCCeeccCCCcc
Confidence            9999  67899999999999999998765544 555544                    899999999999999999999


Q ss_pred             cEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceE
Q psy7108         176 YICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVF  255 (703)
Q Consensus       176 ~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~  255 (703)
                      .+.|||.....+...+..|..        .|..++|+|-...+++.+.+.   .++.|++||..++..+..... ...|.
T Consensus       324 ~~~Iwd~~~~~p~~~~~~H~a--------AVKA~awcP~q~~lLAsGGGs---~D~~i~fwn~~~g~~i~~vdt-gsQVc  391 (484)
T KOG0305|consen  324 VVFIWDGLSPEPKFTFTEHTA--------AVKALAWCPWQSGLLATGGGS---ADRCIKFWNTNTGARIDSVDT-GSQVC  391 (484)
T ss_pred             ceEeccCCCccccEEEeccce--------eeeEeeeCCCccCceEEcCCC---cccEEEEEEcCCCcEeccccc-CCcee
Confidence            999999987777777775554        999999999988777666543   336999999999987765543 46799


Q ss_pred             EEEEcCCCCEEEEEeC--CC-EEEEEcCCCceecc------eeeeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108         256 CVKFSPTGQAWVAATT--EG-VHIYSLDSGYVFDP------FLLDISITPQSVKEALADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       256 ~l~~spdg~~l~s~s~--Dg-v~iwd~~~~~~~~~------~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~  321 (703)
                      ++.|++..+.|+++..  +. |.||+..+......      -++.++++||+  ..++++..|.++++ |++-..
T Consensus       392 sL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~gH~~RVl~la~SPdg--~~i~t~a~DETlrf-w~~f~~  463 (484)
T KOG0305|consen  392 SLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAELLGHTSRVLYLALSPDG--ETIVTGAADETLRF-WNLFDE  463 (484)
T ss_pred             eEEEcCCCCEEEEecCCCCCcEEEEeccccceeeeecCCcceeEEEEECCCC--CEEEEecccCcEEe-ccccCC
Confidence            9999999988876554  33 99999987655333      35789999999  89999999999999 887653

>KOG1446|consensus

Probab=99.89  E-value=1.2e-20  Score=182.98  Aligned_cols=244  Identities=12%  Similarity=0.198  Sum_probs=205.7

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEEC--CCeEEEE
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATL--DGQLIMF  118 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~--dg~I~vw  118 (703)
                      +.+..-.+.|+++.|++  +|..+++++.|.+++|||..++.+...+..++-.+..++|......++.++.  |.+|+..
T Consensus         8 k~f~~~~~~i~sl~fs~--~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryL   85 (311)
T KOG1446|consen    8 KVFRETNGKINSLDFSD--DGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYL   85 (311)
T ss_pred             cccccCCCceeEEEecC--CCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEE
Confidence            45555678899999999  9999999999999999999999888888888888999999888887777777  8899999


Q ss_pred             EcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCc
Q psy7108         119 DVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKS  198 (703)
Q Consensus       119 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~  198 (703)
                      ++.+.+.++.+.||..                    .|.+++.+|-+..+++++.|++|++||++..++...+.....  
T Consensus        86 sl~dNkylRYF~GH~~--------------------~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~--  143 (311)
T KOG1446|consen   86 SLHDNKYLRYFPGHKK--------------------RVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGR--  143 (311)
T ss_pred             EeecCceEEEcCCCCc--------------------eEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCCC--
Confidence            9999999999999987                    899999999999999999999999999998888766653322  


Q ss_pred             cccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC--ccceeec---CCccceEEEEEcCCCCEEEEEeCCC
Q psy7108         199 LDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG--DMAARVL---KPEVRVFCVKFSPTGQAWVAATTEG  273 (703)
Q Consensus       199 ~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~--~~~~~~~---~h~~~V~~l~~spdg~~l~s~s~Dg  273 (703)
                              ..++|.|+|-.++++...+      .|++||++.-  .+-..+.   +.....+.+.|||||++++.++..+
T Consensus       144 --------pi~AfDp~GLifA~~~~~~------~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s  209 (311)
T KOG1446|consen  144 --------PIAAFDPEGLIFALANGSE------LIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNAS  209 (311)
T ss_pred             --------cceeECCCCcEEEEecCCC------eEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCC
Confidence                    4579999999888877653      7999999864  2222222   3466789999999999999999888


Q ss_pred             -EEEEEcCCCceeccee---------eeEEEccchhhhHhhcCCcceEEEEEEecCchhHHH
Q psy7108         274 -VHIYSLDSGYVFDPFL---------LDISITPQSVKEALADKDYAKALMMSLKLNEQGLII  325 (703)
Q Consensus       274 -v~iwd~~~~~~~~~~~---------~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~~~~~  325 (703)
                       +++.|.-+|.....+.         .+..|+||+  +.+.+|+.|+.+.+ |+++....+.
T Consensus       210 ~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds--~Fvl~gs~dg~i~v-w~~~tg~~v~  268 (311)
T KOG1446|consen  210 FIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDS--KFVLSGSDDGTIHV-WNLETGKKVA  268 (311)
T ss_pred             cEEEEEccCCcEeeeEeeccCCCCcceeEEECCCC--cEEEEecCCCcEEE-EEcCCCcEee
Confidence             9999998888765553         478999999  99999999999998 9997664443

>KOG0288|consensus

Probab=99.88  E-value=2.3e-22  Score=200.14  Aligned_cols=255  Identities=19%  Similarity=0.286  Sum_probs=205.9

Q ss_pred             ecccCCceEEecCCceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCc
Q psy7108          14 ETHEGGNVVLKLPGVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSD   93 (703)
Q Consensus        14 ~~~~~~~~~i~~~~v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~   93 (703)
                      +...|.+-+|.+|++...  ....+  .+|.|-.++|+++.|.+  ++..+++++.|+.+++|++...+...++.+|.+.
T Consensus       190 latgg~Dr~Ik~W~v~~~--k~~~~--~tLaGs~g~it~~d~d~--~~~~~iAas~d~~~r~Wnvd~~r~~~TLsGHtdk  263 (459)
T KOG0288|consen  190 LATGGSDRIIKLWNVLGE--KSELI--STLAGSLGNITSIDFDS--DNKHVIAASNDKNLRLWNVDSLRLRHTLSGHTDK  263 (459)
T ss_pred             hhhcchhhhhhhhhcccc--hhhhh--hhhhccCCCcceeeecC--CCceEEeecCCCceeeeeccchhhhhhhcccccc
Confidence            334555566666655421  12355  78899999999999999  9999999999999999999988777788889999


Q ss_pred             EEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec
Q psy7108          94 ALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ  173 (703)
Q Consensus        94 V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~  173 (703)
                      |+++.|......+++|+.|.+|+.||+..+.+.+++-...                     .+..|+.+  ...+++|-.
T Consensus       264 Vt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~~S---------------------~cnDI~~~--~~~~~SgH~  320 (459)
T KOG0288|consen  264 VTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVLPGS---------------------QCNDIVCS--ISDVISGHF  320 (459)
T ss_pred             eeeehhhccccceeeccccchhhhhhhhhhheeccccccc---------------------cccceEec--ceeeeeccc
Confidence            9999999887779999999999999999887766554322                     45666665  566888899


Q ss_pred             CCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCC---
Q psy7108         174 SKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKP---  250 (703)
Q Consensus       174 dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h---  250 (703)
                      |++|++||.++..+......+         ..|+++..+++|..+++++.++      .+.+.|+++.+....+...   
T Consensus       321 DkkvRfwD~Rs~~~~~sv~~g---------g~vtSl~ls~~g~~lLsssRDd------tl~viDlRt~eI~~~~sA~g~k  385 (459)
T KOG0288|consen  321 DKKVRFWDIRSADKTRSVPLG---------GRVTSLDLSMDGLELLSSSRDD------TLKVIDLRTKEIRQTFSAEGFK  385 (459)
T ss_pred             ccceEEEeccCCceeeEeecC---------cceeeEeeccCCeEEeeecCCC------ceeeeecccccEEEEeeccccc
Confidence            999999999999888876532         3799999999999999887764      8999999998777665532   


Q ss_pred             -ccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecce--------eeeEEEccchhhhHhhcCCcceEEEE
Q psy7108         251 -EVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPF--------LLDISITPQSVKEALADKDYAKALMM  314 (703)
Q Consensus       251 -~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~--------~~~~~~spd~~~~~l~sg~~~~~l~l  314 (703)
                       ....+.+.|||++.|+++||.|| |+||++.++++....        ..+++|+|.|  ..+.+.+.++++.+
T Consensus       386 ~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG--~~Llsadk~~~v~l  457 (459)
T KOG0288|consen  386 CASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSG--SGLLSADKQKAVTL  457 (459)
T ss_pred             cccccceeEECCCCceeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCC--chhhcccCCcceEe
Confidence             23488899999999999999999 999999999875433        4678999988  67777777777665

>KOG0289|consensus

Probab=99.88  E-value=2.2e-21  Score=194.11  Aligned_cols=244  Identities=16%  Similarity=0.207  Sum_probs=200.6

Q ss_pred             cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECC
Q psy7108          33 MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLD  112 (703)
Q Consensus        33 ~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~d  112 (703)
                      ..++.+  .++.||...|+.+.++|  +...+++++.|..|+||......+......|.++|+.+..+|.|.+|++++.|
T Consensus       249 ~s~q~l--~~~~Gh~kki~~v~~~~--~~~~v~~aSad~~i~vws~~~~s~~~~~~~h~~~V~~ls~h~tgeYllsAs~d  324 (506)
T KOG0289|consen  249 PSNQIL--ATLKGHTKKITSVKFHK--DLDTVITASADEIIRVWSVPLSSEPTSSRPHEEPVTGLSLHPTGEYLLSASND  324 (506)
T ss_pred             chhhhh--hhccCcceEEEEEEecc--chhheeecCCcceEEeeccccccCccccccccccceeeeeccCCcEEEEecCC
Confidence            356777  89999999999999999  99999999999999999998877777778899999999999999999999999


Q ss_pred             CeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEE
Q psy7108         113 GQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFT  192 (703)
Q Consensus       113 g~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~  192 (703)
                      ++..+.|++++..+........                  .-.+++.+|+|||..+.+|..|+.+++||+.++..+..|.
T Consensus       325 ~~w~Fsd~~~g~~lt~vs~~~s------------------~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fp  386 (506)
T KOG0289|consen  325 GTWAFSDISSGSQLTVVSDETS------------------DVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFP  386 (506)
T ss_pred             ceEEEEEccCCcEEEEEeeccc------------------cceeEEeeEcCCceEEeccCCCceEEEEEcCCccccccCC
Confidence            9999999999998876655321                  1268999999999999999999999999999988877776


Q ss_pred             eccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCC-ccceEEEEEcCCCCEEEEEeC
Q psy7108         193 ITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKP-EVRVFCVKFSPTGQAWVAATT  271 (703)
Q Consensus       193 ~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h-~~~V~~l~~spdg~~l~s~s~  271 (703)
                      +|.        .+|..++|+.+|-++++++.++      .|++||++.-+...++.-. ...+.++.|.+.|.+|+.+++
T Consensus       387 ght--------~~vk~i~FsENGY~Lat~add~------~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~  452 (506)
T KOG0289|consen  387 GHT--------GPVKAISFSENGYWLATAADDG------SVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAGS  452 (506)
T ss_pred             CCC--------CceeEEEeccCceEEEEEecCC------eEEEEEehhhcccceeeccccccceeEEEcCCCCeEEeecc
Confidence            544        5999999999999999998774      6999999988766655533 246999999999999999966


Q ss_pred             CC-EEEEEcC--CCceecc------eeeeEEEccchhhhHhhcCCcceEEEE
Q psy7108         272 EG-VHIYSLD--SGYVFDP------FLLDISITPQSVKEALADKDYAKALMM  314 (703)
Q Consensus       272 Dg-v~iwd~~--~~~~~~~------~~~~~~~spd~~~~~l~sg~~~~~l~l  314 (703)
                      |= |++++-.  +..+...      ....+.|....  .++++++.+..+++
T Consensus       453 ~l~Vy~~~k~~k~W~~~~~~~~~sg~st~v~Fg~~a--q~l~s~smd~~l~~  502 (506)
T KOG0289|consen  453 DLQVYICKKKTKSWTEIKELADHSGLSTGVRFGEHA--QYLASTSMDAILRL  502 (506)
T ss_pred             eeEEEEEecccccceeeehhhhcccccceeeecccc--eEEeeccchhheEE
Confidence            65 5555532  2222222      22446666666  78888888877665

>KOG0300|consensus

Probab=99.88  E-value=1.6e-21  Score=187.59  Aligned_cols=253  Identities=14%  Similarity=0.197  Sum_probs=203.8

Q ss_pred             eeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEE------cCCC--------------------
Q psy7108          29 KKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWN------AVET--------------------   81 (703)
Q Consensus        29 ~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd------~~~~--------------------   81 (703)
                      .+|. .+|+|+  .++.||.+.|++++|++  .+.+++++|.|++-.||.      +...                    
T Consensus       173 ~iWs~Esg~CL--~~Y~GH~GSVNsikfh~--s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~  248 (481)
T KOG0300|consen  173 RIWSLESGACL--ATYTGHTGSVNSIKFHN--SGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNR  248 (481)
T ss_pred             eEEeeccccce--eeecccccceeeEEecc--ccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhccccccc
Confidence            3444 489999  99999999999999999  999999999999999996      2110                    


Q ss_pred             --------------ceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchh
Q psy7108          82 --------------DTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTR  147 (703)
Q Consensus        82 --------------~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (703)
                                    -.+..+.+|.+.|.+..|-..|+.+++++.|.+..+||+++++.+..+.+|..             
T Consensus       249 d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~-------------  315 (481)
T KOG0300|consen  249 DTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVNILTGHDS-------------  315 (481)
T ss_pred             ccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccceeeeeccCceeccccCcch-------------
Confidence                          01234556888899999999999999999999999999999999999999876             


Q ss_pred             hcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCC-ceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCC
Q psy7108         148 EQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREG-ILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETH  226 (703)
Q Consensus       148 ~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~  226 (703)
                             ..+.++-+|..+++++++.|.+.++||++.. ..+..|        +||.+.|+++.|..+.+.  ++++++ 
T Consensus       316 -------ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VF--------QGHtdtVTS~vF~~dd~v--VSgSDD-  377 (481)
T KOG0300|consen  316 -------ELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVF--------QGHTDTVTSVVFNTDDRV--VSGSDD-  377 (481)
T ss_pred             -------hccccccCCcceEEEEeccCceeEeccchhhcceeeee--------cccccceeEEEEecCCce--eecCCC-
Confidence                   7888888999999999999999999999843 223344        456669999999988763  344443 


Q ss_pred             CCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCce----------ecceeeeEEEc
Q psy7108         227 EGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYV----------FDPFLLDISIT  295 (703)
Q Consensus       227 ~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~----------~~~~~~~~~~s  295 (703)
                          ++|++||+++.........-+.+++.++.+..+..++.-.++. |++||++....          +...+.+++|.
T Consensus       378 ----rTvKvWdLrNMRsplATIRtdS~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~RlaRlPrtsRqgHrRMV~c~AW~  453 (481)
T KOG0300|consen  378 ----RTVKVWDLRNMRSPLATIRTDSPANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRLARLPRTSRQGHRRMVTCCAWL  453 (481)
T ss_pred             ----ceEEEeeeccccCcceeeecCCccceeEeecCCceEEeccCCceEEEEecCCCccccCCcccccccceeeeeeecc
Confidence                6999999998765444445567899999998888888888777 99999975443          34455678888


Q ss_pred             cchhhhHhhcCCcceEEEEEEecCch
Q psy7108         296 PQSVKEALADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       296 pd~~~~~l~sg~~~~~l~la~~l~~~  321 (703)
                      .+-...-|.++++|..+.- |+++.|
T Consensus       454 eehp~cnLftcGFDR~v~g-W~in~p  478 (481)
T KOG0300|consen  454 EEHPACNLFTCGFDRMVAG-WKINTP  478 (481)
T ss_pred             ccCcccccccccccceeee-eEeccc
Confidence            7776677889999988775 988765

>KOG0772|consensus

Probab=99.88  E-value=1e-21  Score=200.17  Aligned_cols=228  Identities=18%  Similarity=0.214  Sum_probs=176.7

Q ss_pred             ceeeccCCCcc----c-------cccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCC-----
Q psy7108          28 VKKGDMAARVL----K-------PEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLL-----   91 (703)
Q Consensus        28 v~~~d~tg~~~----~-------~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~-----   91 (703)
                      .++.|.+|..+    +       -..-+||...++|.+|+|. +...++||+.||++||||+...+...+++.+.     
T Consensus       238 akl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~-~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~  316 (641)
T KOG0772|consen  238 AKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPD-NKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGK  316 (641)
T ss_pred             eeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccC-cccceEEecCCCcEEEEecCCchhheeEEeeccCCCc
Confidence            56677777544    0       0223699999999999995 67789999999999999998766555555432     


Q ss_pred             -CcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEE---eccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCE
Q psy7108          92 -SDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSV---EARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSC  167 (703)
Q Consensus        92 -~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~  167 (703)
                       -.++.++|+|||+.||+|+.||.|.+|+..+......+   ..|..                  +..|+|++||+||++
T Consensus       317 Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~------------------g~~Itsi~FS~dg~~  378 (641)
T KOG0772|consen  317 RVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLP------------------GQDITSISFSYDGNY  378 (641)
T ss_pred             ccCceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCC------------------CCceeEEEeccccch
Confidence             35889999999999999999999999998554332222   22221                  337999999999999


Q ss_pred             EEEEecCCcEEEEECCCC-ceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcccee
Q psy7108         168 ILAAGQSKYICIYSSREG-ILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAAR  246 (703)
Q Consensus       168 l~s~s~dg~I~lwD~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~  246 (703)
                      |++-+.|+++++||++.. +++....+-...      -.-+.++|||+.+.++++++.-.......+.+||..+-+.++.
T Consensus       379 LlSRg~D~tLKvWDLrq~kkpL~~~tgL~t~------~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~k  452 (641)
T KOG0772|consen  379 LLSRGFDDTLKVWDLRQFKKPLNVRTGLPTP------FPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYK  452 (641)
T ss_pred             hhhccCCCceeeeeccccccchhhhcCCCcc------CCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEE
Confidence            999999999999999974 445444332221      1346789999999999988765444445899999999999988


Q ss_pred             ecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcC
Q psy7108         247 VLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLD  280 (703)
Q Consensus       247 ~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~  280 (703)
                      +.-....|..+.|+|.-+.+.+++.|| ++||--.
T Consensus       453 i~i~~aSvv~~~WhpkLNQi~~gsgdG~~~vyYdp  487 (641)
T KOG0772|consen  453 IDISTASVVRCLWHPKLNQIFAGSGDGTAHVYYDP  487 (641)
T ss_pred             ecCCCceEEEEeecchhhheeeecCCCceEEEECc
Confidence            888888999999999999999999999 8766543

>KOG0294|consensus

Probab=99.87  E-value=8.6e-21  Score=183.13  Aligned_cols=212  Identities=17%  Similarity=0.265  Sum_probs=171.1

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCC--EEEEEECCCeEEEE
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGT--EIVVATLDGQLIMF  118 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~--~las~s~dg~I~vw  118 (703)
                      ..+..|.++|++++.+    +.++||||.|.+|+|||+....+...+..|.+.|+++.|.++-.  .|++|+.||.|.+|
T Consensus        37 F~~~aH~~sitavAVs----~~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw  112 (362)
T KOG0294|consen   37 FAFSAHAGSITALAVS----GPYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIW  112 (362)
T ss_pred             ccccccccceeEEEec----ceeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCCCcEEEE
Confidence            5678999999999994    69999999999999999999988899999999999999999875  89999999999999


Q ss_pred             EcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCc
Q psy7108         119 DVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKS  198 (703)
Q Consensus       119 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~  198 (703)
                      +....+.+.++++|..                    .|+.++.+|.|+..++.+.|+.+++||+-.|+.-........  
T Consensus       113 ~~~~W~~~~slK~H~~--------------------~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~~~--  170 (362)
T KOG0294|consen  113 RVGSWELLKSLKAHKG--------------------QVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLKNK--  170 (362)
T ss_pred             EcCCeEEeeeeccccc--------------------ccceeEecCCCceEEEEcCCceeeeehhhcCccceeeccCCc--
Confidence            9999999999999875                    799999999999999999999999999988765433322111  


Q ss_pred             cccccccceeeeeccCCCEEEEEcccCC---------------------------------CCCeeEEECCCCCCCccce
Q psy7108         199 LDGINDFINRRKMTEFGNVSLIETRETH---------------------------------EGGNVVLKLPGVKKGDMAA  245 (703)
Q Consensus       199 ~~~~~~~v~~~~~spdg~~l~~~~~~~~---------------------------------~~~~~~i~iwd~~~~~~~~  245 (703)
                             -+.+.|+|.|.++++...+.-                                 .+.+..+.+||.....+..
T Consensus       171 -------at~v~w~~~Gd~F~v~~~~~i~i~q~d~A~v~~~i~~~~r~l~~~~l~~~~L~vG~d~~~i~~~D~ds~~~~~  243 (362)
T KOG0294|consen  171 -------ATLVSWSPQGDHFVVSGRNKIDIYQLDNASVFREIENPKRILCATFLDGSELLVGGDNEWISLKDTDSDTPLT  243 (362)
T ss_pred             -------ceeeEEcCCCCEEEEEeccEEEEEecccHhHhhhhhccccceeeeecCCceEEEecCCceEEEeccCCCccce
Confidence                   112344444443332222110                                 0012478999988888888


Q ss_pred             eecCCccceEEEEE--cCCCCEEEEEeCCC-EEEEEcCCCcee
Q psy7108         246 RVLKPEVRVFCVKF--SPTGQAWVAATTEG-VHIYSLDSGYVF  285 (703)
Q Consensus       246 ~~~~h~~~V~~l~~--spdg~~l~s~s~Dg-v~iwd~~~~~~~  285 (703)
                      .+.+|..+|-++.+  .|++.+|++++.|| |+|||++.....
T Consensus       244 ~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~~k~  286 (362)
T KOG0294|consen  244 EFLAHENRVKDIASYTNPEHEYLVTASSDGFIKVWDIDMETKK  286 (362)
T ss_pred             eeecchhheeeeEEEecCCceEEEEeccCceEEEEEccccccC
Confidence            99999999999974  57788999999999 999999876443

>KOG0274|consensus

Probab=99.87  E-value=6e-21  Score=209.27  Aligned_cols=253  Identities=16%  Similarity=0.217  Sum_probs=208.5

Q ss_pred             eeec-cCCCcccccc-ccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEE
Q psy7108          29 KKGD-MAARVLKPEV-LSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEI  106 (703)
Q Consensus        29 ~~~d-~tg~~~~~~~-l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~l  106 (703)
                      ..|+ .++..+  .. +.||.+.|.++++..  .+++|++|+.|.++++||..++++...+..|.+.|.++...  +..+
T Consensus       231 ~~~~~~~~~~i--~~~l~GH~g~V~~l~~~~--~~~~lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~~~--~~~~  304 (537)
T KOG0274|consen  231 HLWDLNNGYLI--LTRLVGHFGGVWGLAFPS--GGDKLVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCLTID--PFLL  304 (537)
T ss_pred             EEeecccceEE--EeeccCCCCCceeEEEec--CCCEEEEEecCCcEEeEecCCCcEEEEecCCCceEEEEEcc--CceE
Confidence            3555 477777  66 999999999999987  78999999999999999999999988888999999998766  4578


Q ss_pred             EEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCc
Q psy7108         107 VVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGI  186 (703)
Q Consensus       107 as~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~  186 (703)
                      ++|+.|.+|++|+++++..+.++.+|..                    +|.++..+  +..+++|+.|++|++||+.+++
T Consensus       305 ~sgs~D~tVkVW~v~n~~~l~l~~~h~~--------------------~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~  362 (537)
T KOG0274|consen  305 VSGSRDNTVKVWDVTNGACLNLLRGHTG--------------------PVNCVQLD--EPLLVSGSYDGTVKVWDPRTGK  362 (537)
T ss_pred             eeccCCceEEEEeccCcceEEEeccccc--------------------cEEEEEec--CCEEEEEecCceEEEEEhhhce
Confidence            8899999999999999999999988765                    89999988  7899999999999999999999


Q ss_pred             eEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC-ccceeecCCccceEEEEEcCCCCE
Q psy7108         187 LLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG-DMAARVLKPEVRVFCVKFSPTGQA  265 (703)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~-~~~~~~~~h~~~V~~l~~spdg~~  265 (703)
                      +++++.+|..        .|.++.+.+. ..++.++.+      ..|++||+++. +++..+.+|..-+.++.+  .+++
T Consensus       363 cl~sl~gH~~--------~V~sl~~~~~-~~~~Sgs~D------~~IkvWdl~~~~~c~~tl~~h~~~v~~l~~--~~~~  425 (537)
T KOG0274|consen  363 CLKSLSGHTG--------RVYSLIVDSE-NRLLSGSLD------TTIKVWDLRTKRKCIHTLQGHTSLVSSLLL--RDNF  425 (537)
T ss_pred             eeeeecCCcc--------eEEEEEecCc-ceEEeeeec------cceEeecCCchhhhhhhhcCCccccccccc--ccce
Confidence            9999887665        8888877765 566665554      48999999999 999999999998876654  5789


Q ss_pred             EEEEeCCC-EEEEEcCCCceecceeee--EEEccchh-hhHhhcCCcceEEEEEEecCchhHHHHH
Q psy7108         266 WVAATTEG-VHIYSLDSGYVFDPFLLD--ISITPQSV-KEALADKDYAKALMMSLKLNEQGLIIHV  327 (703)
Q Consensus       266 l~s~s~Dg-v~iwd~~~~~~~~~~~~~--~~~spd~~-~~~l~sg~~~~~l~la~~l~~~~~~~~v  327 (703)
                      |++++.|+ |++||..++++...+...  ..++--+. ...+.....++.+.+ |++........+
T Consensus       426 Lvs~~aD~~Ik~WD~~~~~~~~~~~~~~~~~v~~l~~~~~~il~s~~~~~~~l-~dl~~~~~~~~l  490 (537)
T KOG0274|consen  426 LVSSSADGTIKLWDAEEGECLRTLEGRHVGGVSALALGKEEILCSSDDGSVKL-WDLRSGTLIRTL  490 (537)
T ss_pred             eEeccccccEEEeecccCceeeeeccCCcccEEEeecCcceEEEEecCCeeEE-EecccCchhhhh
Confidence            99999999 999999999887665431  11111111 245666777888888 888776655554

>KOG0293|consensus

Probab=99.87  E-value=3.7e-21  Score=191.26  Aligned_cols=245  Identities=15%  Similarity=0.223  Sum_probs=195.3

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCce---eEEEecCCCcEEEEEEecCCCEEEEEECCCeEEE
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDT---QHETIQLLSDALCVAYKPDGTEIVVATLDGQLIM  117 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~---~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~v  117 (703)
                      +++..|++.|.-+.||+  +|++|||+|.|.+..+|.+.....   .....+|..+|..+.||||.+++++|+.|..+.+
T Consensus       218 qil~~htdEVWfl~FS~--nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~l  295 (519)
T KOG0293|consen  218 QILQDHTDEVWFLQFSH--NGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSL  295 (519)
T ss_pred             hhHhhCCCcEEEEEEcC--CCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHheee
Confidence            78899999999999999  999999999999999999875544   4566679999999999999999999999999999


Q ss_pred             EEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCC
Q psy7108         118 FDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNK  197 (703)
Q Consensus       118 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~  197 (703)
                      ||+.+|.....+...                   ++..+.+++|.|||..+++|+.|++|..||+... ....+++-.. 
T Consensus       296 wDv~tgd~~~~y~~~-------------------~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn-~~~~W~gvr~-  354 (519)
T KOG0293|consen  296 WDVDTGDLRHLYPSG-------------------LGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDGN-ILGNWEGVRD-  354 (519)
T ss_pred             ccCCcchhhhhcccC-------------------cCCCcceeEEccCCceeEecCCCCcEEEecCCcc-hhhccccccc-
Confidence            999999987766543                   1337899999999999999999999999998753 3333332211 


Q ss_pred             ccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEE
Q psy7108         198 SLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHI  276 (703)
Q Consensus       198 ~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~i  276 (703)
                            ..|.+++.++||+++++.+.+      ..+++++..+...... ...+.+|++++.|.|++++++.-.+. +++
T Consensus       355 ------~~v~dlait~Dgk~vl~v~~d------~~i~l~~~e~~~dr~l-ise~~~its~~iS~d~k~~LvnL~~qei~L  421 (519)
T KOG0293|consen  355 ------PKVHDLAITYDGKYVLLVTVD------KKIRLYNREARVDRGL-ISEEQPITSFSISKDGKLALVNLQDQEIHL  421 (519)
T ss_pred             ------ceeEEEEEcCCCcEEEEEecc------cceeeechhhhhhhcc-ccccCceeEEEEcCCCcEEEEEcccCeeEE
Confidence                  268899999999999888765      4799998876544432 33456799999999999988887777 999


Q ss_pred             EEcCCCceecce--------eeeEEEccchhhhHhhcCCcceEEEEEEecCchhH
Q psy7108         277 YSLDSGYVFDPF--------LLDISITPQSVKEALADKDYAKALMMSLKLNEQGL  323 (703)
Q Consensus       277 wd~~~~~~~~~~--------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~~~  323 (703)
                      ||++....+..+        ...-+|.-.. ..++++|+.|..+.+ |.......
T Consensus       422 WDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~-~~fiaSGSED~kvyI-Whr~sgkl  474 (519)
T KOG0293|consen  422 WDLEENKLVRKYFGHKQGHFIIRSCFGGGN-DKFIASGSEDSKVYI-WHRISGKL  474 (519)
T ss_pred             eecchhhHHHHhhcccccceEEEeccCCCC-cceEEecCCCceEEE-EEccCCce
Confidence            999865544333        3334444321 268999999999998 87665543

>PTZ00421 coronin; Provisional

Probab=99.87  E-value=2.2e-20  Score=204.53  Aligned_cols=237  Identities=11%  Similarity=0.148  Sum_probs=179.5

Q ss_pred             CCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCcee-------------EEEecCCCcEEEEEEec-CCCEEEEEEC
Q psy7108          46 HEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQ-------------HETIQLLSDALCVAYKP-DGTEIVVATL  111 (703)
Q Consensus        46 H~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~-------------~~~~~~~~~V~~v~~sp-dg~~las~s~  111 (703)
                      |-..|+....++  ++..+++++.+.....|+...+..+             ..+.+|.+.|.+++|+| +++.|++|+.
T Consensus        19 ~~~~i~~~~~~~--d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~   96 (493)
T PTZ00421         19 HFLNVTPSTALW--DCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASE   96 (493)
T ss_pred             ceeccccccccC--CCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeC
Confidence            445566666777  7677788877777777775443211             13456899999999999 8899999999


Q ss_pred             CCeEEEEEcCCCc-------EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCC-CEEEEEecCCcEEEEECC
Q psy7108         112 DGQLIMFDVESAA-------QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADG-SCILAAGQSKYICIYSSR  183 (703)
Q Consensus       112 dg~I~vwd~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg-~~l~s~s~dg~I~lwD~~  183 (703)
                      |++|++||+.++.       .+..+.+|                    ...|.+++|+|++ +.|++++.|++|++||++
T Consensus        97 DgtIkIWdi~~~~~~~~~~~~l~~L~gH--------------------~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~  156 (493)
T PTZ00421         97 DGTIMGWGIPEEGLTQNISDPIVHLQGH--------------------TKKVGIVSFHPSAMNVLASAGADMVVNVWDVE  156 (493)
T ss_pred             CCEEEEEecCCCccccccCcceEEecCC--------------------CCcEEEEEeCcCCCCEEEEEeCCCEEEEEECC
Confidence            9999999997653       23444444                    4489999999985 689999999999999999


Q ss_pred             CCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccc-eEEEEEcCC
Q psy7108         184 EGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVR-VFCVKFSPT  262 (703)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~-V~~l~~spd  262 (703)
                      +++.+..+..|        ...|.+++|+|+|..+++++.++      .|++||+++++.+..+..|... +..+.|+++
T Consensus       157 tg~~~~~l~~h--------~~~V~sla~spdG~lLatgs~Dg------~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~  222 (493)
T PTZ00421        157 RGKAVEVIKCH--------SDQITSLEWNLDGSLLCTTSKDK------KLNIIDPRDGTIVSSVEAHASAKSQRCLWAKR  222 (493)
T ss_pred             CCeEEEEEcCC--------CCceEEEEEECCCCEEEEecCCC------EEEEEECCCCcEEEEEecCCCCcceEEEEcCC
Confidence            99887776544        34899999999999998888764      8999999999988888888764 456789999


Q ss_pred             CCEEEEEe----CCC-EEEEEcCCCce-ecce-------eeeEEEccchhhhHhhcCC-cceEEEEEEecCch
Q psy7108         263 GQAWVAAT----TEG-VHIYSLDSGYV-FDPF-------LLDISITPQSVKEALADKD-YAKALMMSLKLNEQ  321 (703)
Q Consensus       263 g~~l~s~s----~Dg-v~iwd~~~~~~-~~~~-------~~~~~~spd~~~~~l~sg~-~~~~l~la~~l~~~  321 (703)
                      +..+++++    .|+ |++||+.+... ....       .....+++++  ..+..++ .++.+++ |++...
T Consensus       223 ~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~--~~L~lggkgDg~Iri-wdl~~~  292 (493)
T PTZ00421        223 KDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDT--NLLYIGSKGEGNIRC-FELMNE  292 (493)
T ss_pred             CCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCC--CEEEEEEeCCCeEEE-EEeeCC
Confidence            88887654    467 99999976432 2111       1234577888  5555554 5888888 888754

>KOG0772|consensus

Probab=99.87  E-value=2e-21  Score=198.02  Aligned_cols=247  Identities=15%  Similarity=0.159  Sum_probs=184.3

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCcee----EEEe-cCCCcEEEEEEecCCCEEEEEECCCeE
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQ----HETI-QLLSDALCVAYKPDGTEIVVATLDGQL  115 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~----~~~~-~~~~~V~~v~~spdg~~las~s~dg~I  115 (703)
                      .++.+|+..|+++++.|  .|..|+|||.|.+|++||+......    +++. .....|.++.|++.|..|++.+.....
T Consensus       161 i~l~hgtk~Vsal~~Dp--~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqa  238 (641)
T KOG0772|consen  161 IQLKHGTKIVSALAVDP--SGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQA  238 (641)
T ss_pred             EeccCCceEEEEeeecC--CCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCcce
Confidence            46789999999999999  9999999999999999999754321    1222 245679999999999999999999999


Q ss_pred             EEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCC-CEEEEEecCCcEEEEECCCCce-EEEEEe
Q psy7108         116 IMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADG-SCILAAGQSKYICIYSSREGIL-LKKFTI  193 (703)
Q Consensus       116 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg-~~l~s~s~dg~I~lwD~~~~~~-~~~~~~  193 (703)
                      +++|-+..+.....++..-+.        --....+|...++|.+|+|+. ..+++++.||++++||+...+. ...+..
T Consensus       239 kl~DRdG~~~~e~~KGDQYI~--------Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~  310 (641)
T KOG0772|consen  239 KLLDRDGFEIVEFSKGDQYIR--------DMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKT  310 (641)
T ss_pred             eEEccCCceeeeeeccchhhh--------hhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEee
Confidence            999977666655555432110        112334577789999999975 5688999999999999987543 233332


Q ss_pred             ccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCc--c-ceeecCCcc--ceEEEEEcCCCCEEEE
Q psy7108         194 TQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGD--M-AARVLKPEV--RVFCVKFSPTGQAWVA  268 (703)
Q Consensus       194 ~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~--~-~~~~~~h~~--~V~~l~~spdg~~l~s  268 (703)
                      ..   ..+..-.+++++|++||+.+++++.+|      +|.+|+.....  + ...-..|..  .|++++||+||++|++
T Consensus       311 k~---~~g~Rv~~tsC~~nrdg~~iAagc~DG------SIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlS  381 (641)
T KOG0772|consen  311 KP---AGGKRVPVTSCAWNRDGKLIAAGCLDG------SIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLS  381 (641)
T ss_pred             cc---CCCcccCceeeecCCCcchhhhcccCC------ceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhh
Confidence            21   123445789999999999999888875      89999975432  2 222335766  8999999999999999


Q ss_pred             EeCCC-EEEEEcCCCce-ec-------ce-eeeEEEccchhhhHhhcCCc
Q psy7108         269 ATTEG-VHIYSLDSGYV-FD-------PF-LLDISITPQSVKEALADKDY  308 (703)
Q Consensus       269 ~s~Dg-v~iwd~~~~~~-~~-------~~-~~~~~~spd~~~~~l~sg~~  308 (703)
                      -+.|+ +++||++.-+. +.       .+ ..+++|||+.  .++.+|..
T Consensus       382 Rg~D~tLKvWDLrq~kkpL~~~tgL~t~~~~tdc~FSPd~--kli~TGtS  429 (641)
T KOG0772|consen  382 RGFDDTLKVWDLRQFKKPLNVRTGLPTPFPGTDCCFSPDD--KLILTGTS  429 (641)
T ss_pred             ccCCCceeeeeccccccchhhhcCCCccCCCCccccCCCc--eEEEeccc
Confidence            99999 99999976433 21       11 2579999998  66666543

>KOG0640|consensus

Probab=99.87  E-value=2.1e-21  Score=186.40  Aligned_cols=271  Identities=18%  Similarity=0.210  Sum_probs=208.2

Q ss_pred             eeecccCCceEEecCCce------------eec-cCC-CccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEE
Q psy7108          12 TRETHEGGNVVLKLPGVK------------KGD-MAA-RVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWN   77 (703)
Q Consensus        12 ~~~~~~~~~~~i~~~~v~------------~~d-~tg-~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd   77 (703)
                      .+++..+.+..|++-++.            ..+ +.+ .++  ++|..|.++|+++.|+|  ....|++|+.|++|+++|
T Consensus       125 ~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvI--RTlYDH~devn~l~FHP--re~ILiS~srD~tvKlFD  200 (430)
T KOG0640|consen  125 SLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVI--RTLYDHVDEVNDLDFHP--RETILISGSRDNTVKLFD  200 (430)
T ss_pred             cEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceE--eehhhccCcccceeecc--hhheEEeccCCCeEEEEe
Confidence            456666777778877654            112 122 456  89999999999999999  899999999999999999


Q ss_pred             cCCCc--eeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCcc
Q psy7108          78 AVETD--TQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKA  155 (703)
Q Consensus        78 ~~~~~--~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (703)
                      +....  .....+....+|.++.|+|.|.+|++|....++++||+++-++...-..                 ...|.+.
T Consensus       201 fsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanP-----------------d~qht~a  263 (430)
T KOG0640|consen  201 FSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANP-----------------DDQHTGA  263 (430)
T ss_pred             cccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecCc-----------------ccccccc
Confidence            86542  2344556678999999999999999999999999999999887644332                 2346779


Q ss_pred             EEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEEC
Q psy7108         156 VSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKL  235 (703)
Q Consensus       156 V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~i  235 (703)
                      |+++.+++.|+..++++.||.|++||--+++|+.++....+      .+.|.+..|+.+|++++.++.+      ..+++
T Consensus       264 i~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~------gsevcSa~Ftkn~kyiLsSG~D------S~vkL  331 (430)
T KOG0640|consen  264 ITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHG------GSEVCSAVFTKNGKYILSSGKD------STVKL  331 (430)
T ss_pred             eeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcC------CceeeeEEEccCCeEEeecCCc------ceeee
Confidence            99999999999999999999999999999999988763322      2478899999999999987766      48999


Q ss_pred             CCCCCCccceeecCC-----ccceEEEEEcCCCCEEEEEeCCC--EEEEEcCCCce-------ecceeeeEEEccchhhh
Q psy7108         236 PGVKKGDMAARVLKP-----EVRVFCVKFSPTGQAWVAATTEG--VHIYSLDSGYV-------FDPFLLDISITPQSVKE  301 (703)
Q Consensus       236 wd~~~~~~~~~~~~h-----~~~V~~l~~spdg~~l~s~s~Dg--v~iwd~~~~~~-------~~~~~~~~~~spd~~~~  301 (703)
                      |.+.+++++....+-     ..--+...|+.+..+++.-.+-.  +.-||..++..       +......+.-||.+  .
T Consensus       332 WEi~t~R~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~slgHn~a~R~i~HSP~~--p  409 (430)
T KOG0640|consen  332 WEISTGRMLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLSLGHNGAVRWIVHSPVE--P  409 (430)
T ss_pred             eeecCCceEEEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhhhhhcccCCCCCceEEEeCCCC--C
Confidence            999999988877653     11123445666667766555443  77787766543       22334556778888  7


Q ss_pred             HhhcCCcceEEEEEEec
Q psy7108         302 ALADKDYAKALMMSLKL  318 (703)
Q Consensus       302 ~l~sg~~~~~l~la~~l  318 (703)
                      .+.+++.|...++ |.-
T Consensus       410 ~FmTcsdD~raRF-Wyr  425 (430)
T KOG0640|consen  410 AFMTCSDDFRARF-WYR  425 (430)
T ss_pred             ceeeecccceeee-eee
Confidence            8888888888888 753

>KOG1446|consensus

Probab=99.87  E-value=8.3e-20  Score=177.13  Aligned_cols=256  Identities=13%  Similarity=0.204  Sum_probs=202.6

Q ss_pred             eecccCCceEEecCC--ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeC--CCcEEEEEcCCCceeEEE
Q psy7108          13 RETHEGGNVVLKLPG--VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASW--DKTVKLWNAVETDTQHET   87 (703)
Q Consensus        13 ~~~~~~~~~~i~~~~--v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~--Dg~V~iWd~~~~~~~~~~   87 (703)
                      -|..+|...+...-+  ++++| .+|+.+  +++..+.-.|..++|..  ..+.++.++.  |.+||.-++.+.+.++.+
T Consensus        21 ~fs~~G~~litss~dDsl~LYd~~~g~~~--~ti~skkyG~~~~~Fth--~~~~~i~sStk~d~tIryLsl~dNkylRYF   96 (311)
T KOG1446|consen   21 DFSDDGLLLITSSEDDSLRLYDSLSGKQV--KTINSKKYGVDLACFTH--HSNTVIHSSTKEDDTIRYLSLHDNKYLRYF   96 (311)
T ss_pred             EecCCCCEEEEecCCCeEEEEEcCCCcee--eEeecccccccEEEEec--CCceEEEccCCCCCceEEEEeecCceEEEc
Confidence            344455555554443  66777 678888  88988888899999987  6666666655  889999999999889999


Q ss_pred             ecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCE
Q psy7108          88 IQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSC  167 (703)
Q Consensus        88 ~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~  167 (703)
                      .+|...|.+++.+|-+..+++++.|++|++||++..++...+....                      -..++|+|+|-.
T Consensus        97 ~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~----------------------~pi~AfDp~GLi  154 (311)
T KOG1446|consen   97 PGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSG----------------------RPIAAFDPEGLI  154 (311)
T ss_pred             CCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCC----------------------CcceeECCCCcE
Confidence            9999999999999999999999999999999999888777665543                      245899999999


Q ss_pred             EEEEecCCcEEEEECCCC--ceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccce
Q psy7108         168 ILAAGQSKYICIYSSREG--ILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAA  245 (703)
Q Consensus       168 l~s~s~dg~I~lwD~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~  245 (703)
                      +|++.....|++||++..  .+..++....     +.....+.+.|||||+.+++++..+      .+++.|.-+|....
T Consensus       155 fA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~-----~~~~ew~~l~FS~dGK~iLlsT~~s------~~~~lDAf~G~~~~  223 (311)
T KOG1446|consen  155 FALANGSELIKLYDLRSFDKGPFTTFSITD-----NDEAEWTDLEFSPDGKSILLSTNAS------FIYLLDAFDGTVKS  223 (311)
T ss_pred             EEEecCCCeEEEEEecccCCCCceeEccCC-----CCccceeeeEEcCCCCEEEEEeCCC------cEEEEEccCCcEee
Confidence            999988889999999973  4555665443     2334778999999999999988764      78888988898777


Q ss_pred             eecCCccc---eEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceeccee-------eeEEEccchhhhHhhcCC
Q psy7108         246 RVLKPEVR---VFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPFL-------LDISITPQSVKEALADKD  307 (703)
Q Consensus       246 ~~~~h~~~---V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~~-------~~~~~spd~~~~~l~sg~  307 (703)
                      .+..+...   ..+.+|+||++++++|+.|| |.+|+++++..+..+.       ..+.|.|.-  .++++.+
T Consensus       224 tfs~~~~~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~~--~mf~sa~  294 (311)
T KOG1446|consen  224 TFSGYPNAGNLPLSATFTPDSKFVLSGSDDGTIHVWNLETGKKVAVLRGPNGGPVSCVRFNPRY--AMFVSAS  294 (311)
T ss_pred             eEeeccCCCCcceeEEECCCCcEEEEecCCCcEEEEEcCCCcEeeEecCCCCCCccccccCCce--eeeeecC
Confidence            77665433   25778999999999999999 9999999998765543       346677766  4455444

>KOG0647|consensus

Probab=99.87  E-value=9.7e-21  Score=181.77  Aligned_cols=229  Identities=16%  Similarity=0.234  Sum_probs=169.6

Q ss_pred             cCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCce--eEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcC
Q psy7108          44 SGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDT--QHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVE  121 (703)
Q Consensus        44 ~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~--~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~  121 (703)
                      ..-.+.|.+++|||. ...+++.+|+||+||+|+++....  ......|.++|.+++|+.||..+++|+.|+.+++||+.
T Consensus        24 ~pP~DsIS~l~FSP~-~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~  102 (347)
T KOG0647|consen   24 NPPEDSISALAFSPQ-ADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLA  102 (347)
T ss_pred             CCcccchheeEeccc-cCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEcc
Confidence            445789999999994 566777999999999999987422  24445699999999999999999999999999999999


Q ss_pred             CCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCC--EEEEEecCCcEEEEECCCCceEEEEEeccC---
Q psy7108         122 SAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGS--CILAAGQSKYICIYSSREGILLKKFTITQN---  196 (703)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~--~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~---  196 (703)
                      +++ +..+..|..                    +|.++.|-+...  .|++||.|++|+.||++...++.++..+..   
T Consensus       103 S~Q-~~~v~~Hd~--------------------pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeRvYa  161 (347)
T KOG0647|consen  103 SGQ-VSQVAAHDA--------------------PVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPERVYA  161 (347)
T ss_pred             CCC-eeeeeeccc--------------------ceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccceeee
Confidence            995 445555544                    899999987654  899999999999999998887766654332   


Q ss_pred             ------------------------------CccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcccee
Q psy7108         197 ------------------------------KSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAAR  246 (703)
Q Consensus       197 ------------------------------~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~  246 (703)
                                                    ......+..+++++...|....++++-+|    +..|.--|-...+.-..
T Consensus       162 ~Dv~~pm~vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEG----rv~iq~id~~~~~~nFt  237 (347)
T KOG0647|consen  162 ADVLYPMAVVATAERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEG----RVAIQYIDDPNPKDNFT  237 (347)
T ss_pred             hhccCceeEEEecCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecc----eEEEEecCCCCccCcee
Confidence                                          01122345678899999888888877654    23344334322122223


Q ss_pred             ecCCc---------cceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCcee------cceeeeEEEccch
Q psy7108         247 VLKPE---------VRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVF------DPFLLDISITPQS  298 (703)
Q Consensus       247 ~~~h~---------~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~------~~~~~~~~~spd~  298 (703)
                      +..|.         ..|++++|+|.-..|+|++.|| ...||-+....+      .......+|+.+|
T Consensus       238 FkCHR~~~~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkdar~kLk~s~~~~qpItcc~fn~~G  305 (347)
T KOG0647|consen  238 FKCHRSTNSVNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDARTKLKTSETHPQPITCCSFNRNG  305 (347)
T ss_pred             EEEeccCCCCCCceEEecceEeecccceEEEecCCceEEEecchhhhhhhccCcCCCccceeEecCCC
Confidence            33332         3588899999999999999999 899997654433      3334567777777

>KOG0305|consensus

Probab=99.87  E-value=1e-20  Score=199.92  Aligned_cols=235  Identities=13%  Similarity=0.192  Sum_probs=195.4

Q ss_pred             eEEeeecccCCceEEecCC--ceeec-cCCCccccccccC-CCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCcee
Q psy7108           9 LIETRETHEGGNVVLKLPG--VKKGD-MAARVLKPEVLSG-HEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQ   84 (703)
Q Consensus         9 ~~~~~~~~~~~~~~i~~~~--v~~~d-~tg~~~~~~~l~g-H~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~   84 (703)
                      +-......+|....+..-+  +.+|| .+.+.+  +.+.+ |...|.+++|+.    ..+.+|+.|+.|..+|+...+..
T Consensus       220 vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~--~~~~~~h~~rvg~laW~~----~~lssGsr~~~I~~~dvR~~~~~  293 (484)
T KOG0305|consen  220 VTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKT--RTLRGSHASRVGSLAWNS----SVLSSGSRDGKILNHDVRISQHV  293 (484)
T ss_pred             eEEEEECCCCCEEEEeecCCeEEEEehhhcccc--ccccCCcCceeEEEeccC----ceEEEecCCCcEEEEEEecchhh
Confidence            3334445555555554333  67777 355655  78888 999999999975    78999999999999999887765


Q ss_pred             EE-EecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC
Q psy7108          85 HE-TIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA  163 (703)
Q Consensus        85 ~~-~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp  163 (703)
                      .. ...|...|..++|++|+.++|+|+.|+.+.|||....++...+..|..                    .|.+++|+|
T Consensus       294 ~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~a--------------------AVKA~awcP  353 (484)
T KOG0305|consen  294 VSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTA--------------------AVKALAWCP  353 (484)
T ss_pred             hhhhhcccceeeeeEECCCCCeeccCCCccceEeccCCCccccEEEeccce--------------------eeeEeeeCC
Confidence            55 556999999999999999999999999999999988888888888876                    899999999


Q ss_pred             -CCCEEEEE--ecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCC
Q psy7108         164 -DGSCILAA--GQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKK  240 (703)
Q Consensus       164 -dg~~l~s~--s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~  240 (703)
                       ....||+|  +.|++|++||..++..+.....         ...|.++.|++..+-++++.+...    ..|.||+..+
T Consensus       354 ~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdt---------gsQVcsL~Wsk~~kEi~sthG~s~----n~i~lw~~ps  420 (484)
T KOG0305|consen  354 WQSGLLATGGGSADRCIKFWNTNTGARIDSVDT---------GSQVCSLIWSKKYKELLSTHGYSE----NQITLWKYPS  420 (484)
T ss_pred             CccCceEEcCCCcccEEEEEEcCCCcEeccccc---------CCceeeEEEcCCCCEEEEecCCCC----CcEEEEeccc
Confidence             55677775  5789999999999988876542         247999999999988877765532    3799999999


Q ss_pred             CccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCC
Q psy7108         241 GDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSG  282 (703)
Q Consensus       241 ~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~  282 (703)
                      .+.+..+.+|..+|..+++||||..+++|+.|. +++|++-..
T Consensus       421 ~~~~~~l~gH~~RVl~la~SPdg~~i~t~a~DETlrfw~~f~~  463 (484)
T KOG0305|consen  421 MKLVAELLGHTSRVLYLALSPDGETIVTGAADETLRFWNLFDE  463 (484)
T ss_pred             cceeeeecCCcceeEEEEECCCCCEEEEecccCcEEeccccCC
Confidence            888999999999999999999999999999999 999998654

>KOG0275|consensus

Probab=99.87  E-value=2.5e-22  Score=193.47  Aligned_cols=209  Identities=16%  Similarity=0.237  Sum_probs=180.0

Q ss_pred             cccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEe-cCCCcEEEEEEecCCCEEEEEECCCeEEEEEc
Q psy7108          42 VLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETI-QLLSDALCVAYKPDGTEIVVATLDGQLIMFDV  120 (703)
Q Consensus        42 ~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~-~~~~~V~~v~~spdg~~las~s~dg~I~vwd~  120 (703)
                      .+.-|.++|.|+.|+.  |...||+|+.||.|++|.+.++.+++.+- .|...|+|+.||.|+..+.+++.|.++++--+
T Consensus       258 ~fMMmd~aVlci~FSR--DsEMlAsGsqDGkIKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGl  335 (508)
T KOG0275|consen  258 NFMMMDDAVLCISFSR--DSEMLASGSQDGKIKVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGL  335 (508)
T ss_pred             ceeecccceEEEeecc--cHHHhhccCcCCcEEEEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEecc
Confidence            3445789999999999  99999999999999999999998887776 59999999999999999999999999999999


Q ss_pred             CCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCC---
Q psy7108         121 ESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNK---  197 (703)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~---  197 (703)
                      .+|+.+..+++|..                    .|+...|++||..+++++.||+|++|+..+.+|+.+|+.....   
T Consensus       336 KSGK~LKEfrGHsS--------------------yvn~a~ft~dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~d~~v  395 (508)
T KOG0275|consen  336 KSGKCLKEFRGHSS--------------------YVNEATFTDDGHHIISASSDGTVKVWHGKTTECLSTFKPLGTDYPV  395 (508)
T ss_pred             ccchhHHHhcCccc--------------------cccceEEcCCCCeEEEecCCccEEEecCcchhhhhhccCCCCcccc
Confidence            99999999999876                    8999999999999999999999999999998888776532210   


Q ss_pred             ------------------------------------ccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC
Q psy7108         198 ------------------------------------SLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG  241 (703)
Q Consensus       198 ------------------------------------~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~  241 (703)
                                                          +-.......-+++.||.|.+++..+.+      ..++.+...+|
T Consensus       396 nsv~~~PKnpeh~iVCNrsntv~imn~qGQvVrsfsSGkREgGdFi~~~lSpkGewiYcigED------~vlYCF~~~sG  469 (508)
T KOG0275|consen  396 NSVILLPKNPEHFIVCNRSNTVYIMNMQGQVVRSFSSGKREGGDFINAILSPKGEWIYCIGED------GVLYCFSVLSG  469 (508)
T ss_pred             eeEEEcCCCCceEEEEcCCCeEEEEeccceEEeeeccCCccCCceEEEEecCCCcEEEEEccC------cEEEEEEeecC
Confidence                                                000011234456788888888876655      37888899999


Q ss_pred             ccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEE
Q psy7108         242 DMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYS  278 (703)
Q Consensus       242 ~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd  278 (703)
                      .....+.-|+..|..++-+|..+.+|+-++|| +++|.
T Consensus       470 ~LE~tl~VhEkdvIGl~HHPHqNllAsYsEDgllKLWk  507 (508)
T KOG0275|consen  470 KLERTLPVHEKDVIGLTHHPHQNLLASYSEDGLLKLWK  507 (508)
T ss_pred             ceeeeeecccccccccccCcccchhhhhcccchhhhcC
Confidence            99888999999999999999999999999999 89995

>PTZ00420 coronin; Provisional

Probab=99.86  E-value=1.2e-19  Score=199.68  Aligned_cols=216  Identities=8%  Similarity=0.048  Sum_probs=166.0

Q ss_pred             EeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecC-CCEEEEEECCCeEEEEEcCCCcE--------EEEEeccccCCC
Q psy7108          67 ASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPD-GTEIVVATLDGQLIMFDVESAAQ--------VGSVEARRDLDS  137 (703)
Q Consensus        67 gs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spd-g~~las~s~dg~I~vwd~~~~~~--------~~~~~~~~~~~~  137 (703)
                      |+.++.+++|+......+..+.+|.+.|.+++|+|+ +.+|++|+.|++|++||+.++..        +..+.+      
T Consensus        50 GG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~g------  123 (568)
T PTZ00420         50 GGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKG------  123 (568)
T ss_pred             CCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeec------
Confidence            567889999998776666777789999999999997 78999999999999999986431        223333      


Q ss_pred             CCCCCccchhhcccCCccEEEEEEcCCCCEE-EEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCC
Q psy7108         138 GRLDTDLVTREQSLKAKAVSTVCYSADGSCI-LAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGN  216 (703)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l-~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~  216 (703)
                                    |...|.+++|+|++..+ ++++.|++|++||+++++....+..         ...|.+++|+|+|.
T Consensus       124 --------------H~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~---------~~~V~SlswspdG~  180 (568)
T PTZ00420        124 --------------HKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINM---------PKKLSSLKWNIKGN  180 (568)
T ss_pred             --------------CCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEec---------CCcEEEEEECCCCC
Confidence                          44589999999998765 6889999999999999887665541         13689999999999


Q ss_pred             EEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEE-----EEEcCCCCEEEEEeCC----C-EEEEEcCC-Ccee
Q psy7108         217 VSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFC-----VKFSPTGQAWVAATTE----G-VHIYSLDS-GYVF  285 (703)
Q Consensus       217 ~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~-----l~~spdg~~l~s~s~D----g-v~iwd~~~-~~~~  285 (703)
                      .+++++.+      +.|++||+++++.+..+.+|.+.+..     ..|++++.++++++.+    + |+|||+.. +..+
T Consensus       181 lLat~s~D------~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl  254 (568)
T PTZ00420        181 LLSGTCVG------KHMHIIDPRKQEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSAL  254 (568)
T ss_pred             EEEEEecC------CEEEEEECCCCcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCce
Confidence            98887755      38999999999988888888875433     3456899999887766    3 99999985 4433


Q ss_pred             cceeee-------EEE-ccchhhhHhhcCCcceEEEEEEecCc
Q psy7108         286 DPFLLD-------ISI-TPQSVKEALADKDYAKALMMSLKLNE  320 (703)
Q Consensus       286 ~~~~~~-------~~~-spd~~~~~l~sg~~~~~l~la~~l~~  320 (703)
                      .....+       -.+ .+++  .++.+|..|+.+++ |.+..
T Consensus       255 ~~~~ld~~~~~L~p~~D~~tg--~l~lsGkGD~tIr~-~e~~~  294 (568)
T PTZ00420        255 VTMSIDNASAPLIPHYDESTG--LIYLIGKGDGNCRY-YQHSL  294 (568)
T ss_pred             EEEEecCCccceEEeeeCCCC--CEEEEEECCCeEEE-EEccC
Confidence            322211       122 3345  56778888999998 87753

>KOG0308|consensus

Probab=99.86  E-value=4.6e-21  Score=200.57  Aligned_cols=246  Identities=17%  Similarity=0.221  Sum_probs=202.0

Q ss_pred             ceeeEEeeecccCCceEEecCCceeecc--CCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc-
Q psy7108           6 NVSLIETRETHEGGNVVLKLPGVKKGDM--AARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD-   82 (703)
Q Consensus         6 ~~~~~~~~~~~~~~~~~i~~~~v~~~d~--tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~-   82 (703)
                      ++..-+.+| ..|.+.+++.|++.--..  ....+  ..++.|.+.|+.+....  +++.|+|+|.|-+|++|+...+. 
T Consensus        33 da~~~ryLf-TgGRDg~i~~W~~~~d~~~~s~~~~--asme~HsDWVNDiiL~~--~~~tlIS~SsDtTVK~W~~~~~~~  107 (735)
T KOG0308|consen   33 DAPNGRYLF-TGGRDGIIRLWSVTQDSNEPSTPYI--ASMEHHSDWVNDIILCG--NGKTLISASSDTTVKVWNAHKDNT  107 (735)
T ss_pred             cCCCCceEE-ecCCCceEEEeccccccCCcccchh--hhhhhhHhHHhhHHhhc--CCCceEEecCCceEEEeecccCcc
Confidence            333334444 578899999998763211  12346  78899999999999998  89999999999999999998763 


Q ss_pred             -eeEEEecCCCcEEEEEE-ecCCCEEEEEECCCeEEEEEcCCCcE--EEEEeccccCCCCCCCCccchhhcccCCccEEE
Q psy7108          83 -TQHETIQLLSDALCVAY-KPDGTEIVVATLDGQLIMFDVESAAQ--VGSVEARRDLDSGRLDTDLVTREQSLKAKAVST  158 (703)
Q Consensus        83 -~~~~~~~~~~~V~~v~~-spdg~~las~s~dg~I~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~  158 (703)
                       +...+..|.+.|.|+++ .++...+|+|+.|+.|.+||++++..  +.++..-..           ....+++..+|.+
T Consensus       108 ~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~-----------~sl~sG~k~siYS  176 (735)
T KOG0308|consen  108 FCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTV-----------NSLGSGPKDSIYS  176 (735)
T ss_pred             hhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhcccccc-----------ccCCCCCccceee
Confidence             45566679999999999 88889999999999999999998843  332222110           0011145668999


Q ss_pred             EEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCC
Q psy7108         159 VCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGV  238 (703)
Q Consensus       159 i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~  238 (703)
                      ++.++.|..+++|+..+.+++||.++++.+..+.+|        .+-|..+..++||+.++++++++      +|++||+
T Consensus       177 LA~N~t~t~ivsGgtek~lr~wDprt~~kimkLrGH--------TdNVr~ll~~dDGt~~ls~sSDg------tIrlWdL  242 (735)
T KOG0308|consen  177 LAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGH--------TDNVRVLLVNDDGTRLLSASSDG------TIRLWDL  242 (735)
T ss_pred             eecCCcceEEEecCcccceEEeccccccceeeeecc--------ccceEEEEEcCCCCeEeecCCCc------eEEeeec
Confidence            999999999999999999999999999888777654        45899999999999999999885      9999999


Q ss_pred             CCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCC
Q psy7108         239 KKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDS  281 (703)
Q Consensus       239 ~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~  281 (703)
                      ...+++.++..|...|+++..+|+-..+.+|+.|| |..=|+.+
T Consensus       243 gqQrCl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n  286 (735)
T KOG0308|consen  243 GQQRCLATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRTDLRN  286 (735)
T ss_pred             cccceeeeEEeccCceEEEeeCCCcceEEecCCCCcEEecccCC
Confidence            99999999999999999999999999999999999 88777766

>KOG0274|consensus

Probab=99.86  E-value=2.5e-20  Score=204.36  Aligned_cols=235  Identities=19%  Similarity=0.292  Sum_probs=198.3

Q ss_pred             eeeEEe-eecccCCceEEecC--C-----------ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCC
Q psy7108           7 VSLIET-RETHEGGNVVLKLP--G-----------VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDK   71 (703)
Q Consensus         7 ~~~~~~-~~~~~~~~~~i~~~--~-----------v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg   71 (703)
                      ...+.+ +.+|.++.+.+.+.  .           +++|| .+|+|.  +++.||.+.|.++...+    ..+++||.|.
T Consensus       238 ~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~--~~l~gh~stv~~~~~~~----~~~~sgs~D~  311 (537)
T KOG0274|consen  238 GYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECT--HSLQGHTSSVRCLTIDP----FLLVSGSRDN  311 (537)
T ss_pred             ceEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEE--EEecCCCceEEEEEccC----ceEeeccCCc
Confidence            334555 77788888887776  1           77888 789999  99999999999998865    7889999999


Q ss_pred             cEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhccc
Q psy7108          72 TVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSL  151 (703)
Q Consensus        72 ~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (703)
                      +|++|+++++..+....+|.++|.++..+  +..+++|+.|++|++||+.+++.+.++.+|..                 
T Consensus       312 tVkVW~v~n~~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~-----------------  372 (537)
T KOG0274|consen  312 TVKVWDVTNGACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTG-----------------  372 (537)
T ss_pred             eEEEEeccCcceEEEeccccccEEEEEec--CCEEEEEecCceEEEEEhhhceeeeeecCCcc-----------------
Confidence            99999999887766666699999999998  88999999999999999999999999999876                 


Q ss_pred             CCccEEEEEEcCCCCEEEEEecCCcEEEEECCCC-ceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCe
Q psy7108         152 KAKAVSTVCYSADGSCILAAGQSKYICIYSSREG-ILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGN  230 (703)
Q Consensus       152 ~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~  230 (703)
                         .|.++.+.+. ..+++|+.|++|++||+++. +++.++.+|..        .+.+  ....++.++.++.++     
T Consensus       373 ---~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~--------~v~~--l~~~~~~Lvs~~aD~-----  433 (537)
T KOG0274|consen  373 ---RVYSLIVDSE-NRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTS--------LVSS--LLLRDNFLVSSSADG-----  433 (537)
T ss_pred             ---eEEEEEecCc-ceEEeeeeccceEeecCCchhhhhhhhcCCcc--------cccc--cccccceeEeccccc-----
Confidence               8999988765 88999999999999999999 88888876655        3433  334566777766653     


Q ss_pred             eEEECCCCCCCccceeecC-CccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecce
Q psy7108         231 VVLKLPGVKKGDMAARVLK-PEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPF  288 (703)
Q Consensus       231 ~~i~iwd~~~~~~~~~~~~-h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~  288 (703)
                       .|++||..++++...+.+ |...|..+++.  ...+++++.|+ +++||+++++.....
T Consensus       434 -~Ik~WD~~~~~~~~~~~~~~~~~v~~l~~~--~~~il~s~~~~~~~l~dl~~~~~~~~l  490 (537)
T KOG0274|consen  434 -TIKLWDAEEGECLRTLEGRHVGGVSALALG--KEEILCSSDDGSVKLWDLRSGTLIRTL  490 (537)
T ss_pred             -cEEEeecccCceeeeeccCCcccEEEeecC--cceEEEEecCCeeEEEecccCchhhhh
Confidence             899999999999999988 67889888876  46788889999 999999999876654

>KOG0641|consensus

Probab=99.86  E-value=1.5e-19  Score=166.36  Aligned_cols=243  Identities=17%  Similarity=0.233  Sum_probs=191.7

Q ss_pred             ccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCC--c---eeEEEecCCCcEEEEEEecC----CCEEEEEEC-C
Q psy7108          43 LSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVET--D---TQHETIQLLSDALCVAYKPD----GTEIVVATL-D  112 (703)
Q Consensus        43 l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~--~---~~~~~~~~~~~V~~v~~spd----g~~las~s~-d  112 (703)
                      -+.|.+.|+|.+|+|  +|.+|++||.|++|++.-....  +   ...++.-|.+.|..++|-.+    |..|++++. |
T Consensus        85 ~khhkgsiyc~~ws~--~geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagd  162 (350)
T KOG0641|consen   85 NKHHKGSIYCTAWSP--CGELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGD  162 (350)
T ss_pred             ccccCccEEEEEecC--ccCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCc
Confidence            356899999999999  9999999999999998755432  2   22455568999999999643    456777654 6


Q ss_pred             CeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEE
Q psy7108         113 GQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFT  192 (703)
Q Consensus       113 g~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~  192 (703)
                      ..|++=|..+|+....+.+|..                    .|.++ ++-+|-.+++|+.|.+|++||++-..++.++.
T Consensus       163 c~iy~tdc~~g~~~~a~sghtg--------------------hilal-yswn~~m~~sgsqdktirfwdlrv~~~v~~l~  221 (350)
T KOG0641|consen  163 CKIYITDCGRGQGFHALSGHTG--------------------HILAL-YSWNGAMFASGSQDKTIRFWDLRVNSCVNTLD  221 (350)
T ss_pred             ceEEEeecCCCCcceeecCCcc--------------------cEEEE-EEecCcEEEccCCCceEEEEeeeccceeeecc
Confidence            7788889999999988888764                    55544 44568899999999999999999988888765


Q ss_pred             eccCCcccc-ccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeC
Q psy7108         193 ITQNKSLDG-INDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATT  271 (703)
Q Consensus       193 ~~~~~~~~~-~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~  271 (703)
                      ....  -.+ ..+.|..++..|.|+.++.+-.+      .+..+||++.++.++++..|...|.++.|||...++++++.
T Consensus       222 ~~~~--~~glessavaav~vdpsgrll~sg~~d------ssc~lydirg~r~iq~f~phsadir~vrfsp~a~yllt~sy  293 (350)
T KOG0641|consen  222 NDFH--DGGLESSAVAAVAVDPSGRLLASGHAD------SSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSY  293 (350)
T ss_pred             Cccc--CCCcccceeEEEEECCCcceeeeccCC------CceEEEEeeCCceeeeeCCCccceeEEEeCCCceEEEEecc
Confidence            3321  111 12578999999999998876654      37889999999999999999999999999999999999999


Q ss_pred             CC-EEEEEcCCCceec----------ceeeeEEEccchhhhHhhcCCcceEEEEEEecC
Q psy7108         272 EG-VHIYSLDSGYVFD----------PFLLDISITPQSVKEALADKDYAKALMMSLKLN  319 (703)
Q Consensus       272 Dg-v~iwd~~~~~~~~----------~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~  319 (703)
                      |. |++=|++..-..+          .-...+.|+|+.  ..+.+.+.|++..+ |.++
T Consensus       294 d~~ikltdlqgdla~el~~~vv~ehkdk~i~~rwh~~d--~sfisssadkt~tl-wa~~  349 (350)
T KOG0641|consen  294 DMKIKLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQD--FSFISSSADKTATL-WALN  349 (350)
T ss_pred             cceEEEeecccchhhcCceEEEEeccCceEEEEecCcc--ceeeeccCcceEEE-eccC
Confidence            99 9999987542211          112457888988  55677788888887 8765

>KOG0288|consensus

Probab=99.85  E-value=8.5e-21  Score=189.08  Aligned_cols=212  Identities=18%  Similarity=0.268  Sum_probs=177.6

Q ss_pred             ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEE
Q psy7108          28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEI  106 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~l  106 (703)
                      .++|+ ..+++.  .+|+||++.|+++.|..  ....+++|+.|.++++||+....+....+ ..+.+.+++.+  +..+
T Consensus       243 ~r~Wnvd~~r~~--~TLsGHtdkVt~ak~~~--~~~~vVsgs~DRtiK~WDl~k~~C~kt~l-~~S~cnDI~~~--~~~~  315 (459)
T KOG0288|consen  243 LRLWNVDSLRLR--HTLSGHTDKVTAAKFKL--SHSRVVSGSADRTIKLWDLQKAYCSKTVL-PGSQCNDIVCS--ISDV  315 (459)
T ss_pred             eeeeeccchhhh--hhhcccccceeeehhhc--cccceeeccccchhhhhhhhhhheecccc-ccccccceEec--ceee
Confidence            34555 367777  99999999999999998  66669999999999999998865554444 34456666665  5678


Q ss_pred             EEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCc
Q psy7108         107 VVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGI  186 (703)
Q Consensus       107 as~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~  186 (703)
                      ++|-.|++|++||+++.......+.+.                     .|+++..+++|..+++++.|.++.+.|+++..
T Consensus       316 ~SgH~DkkvRfwD~Rs~~~~~sv~~gg---------------------~vtSl~ls~~g~~lLsssRDdtl~viDlRt~e  374 (459)
T KOG0288|consen  316 ISGHFDKKVRFWDIRSADKTRSVPLGG---------------------RVTSLDLSMDGLELLSSSRDDTLKVIDLRTKE  374 (459)
T ss_pred             eecccccceEEEeccCCceeeEeecCc---------------------ceeeEeeccCCeEEeeecCCCceeeeeccccc
Confidence            889999999999999999988887754                     79999999999999999999999999999998


Q ss_pred             eEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCcc--ceEEEEEcCCCC
Q psy7108         187 LLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEV--RVFCVKFSPTGQ  264 (703)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~--~V~~l~~spdg~  264 (703)
                      ....+......  .+  ...+.+.|||++.++++++.++      .|+||++.++++...+.....  .|++++|+|.|.
T Consensus       375 I~~~~sA~g~k--~a--sDwtrvvfSpd~~YvaAGS~dg------sv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~  444 (459)
T KOG0288|consen  375 IRQTFSAEGFK--CA--SDWTRVVFSPDGSYVAAGSADG------SVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGS  444 (459)
T ss_pred             EEEEeeccccc--cc--cccceeEECCCCceeeeccCCC------cEEEEEccCceEEEEeccCCCCcceEEEEEcCCCc
Confidence            88888755432  12  2478899999999999988875      899999999998877766444  599999999999


Q ss_pred             EEEEEeCCC-EEEE
Q psy7108         265 AWVAATTEG-VHIY  277 (703)
Q Consensus       265 ~l~s~s~Dg-v~iw  277 (703)
                      .+++++.++ +.+|
T Consensus       445 ~Llsadk~~~v~lW  458 (459)
T KOG0288|consen  445 GLLSADKQKAVTLW  458 (459)
T ss_pred             hhhcccCCcceEec
Confidence            999999999 8888

>KOG0269|consensus

Probab=99.85  E-value=8.3e-21  Score=202.34  Aligned_cols=230  Identities=16%  Similarity=0.208  Sum_probs=182.4

Q ss_pred             EeeecccCCceEEecCCceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecC
Q psy7108          11 ETRETHEGGNVVLKLPGVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQL   90 (703)
Q Consensus        11 ~~~~~~~~~~~~i~~~~v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~   90 (703)
                      ..+.+.+..+++|.+|++... ...+++  ..+..|+..|+++.|++. ...+|+|||.||+|++||++...........
T Consensus       100 ~NlIAT~s~nG~i~vWdlnk~-~rnk~l--~~f~EH~Rs~~~ldfh~t-ep~iliSGSQDg~vK~~DlR~~~S~~t~~~n  175 (839)
T KOG0269|consen  100 SNLIATCSTNGVISVWDLNKS-IRNKLL--TVFNEHERSANKLDFHST-EPNILISGSQDGTVKCWDLRSKKSKSTFRSN  175 (839)
T ss_pred             hhhheeecCCCcEEEEecCcc-ccchhh--hHhhhhccceeeeeeccC-CccEEEecCCCceEEEEeeeccccccccccc
Confidence            334455666777777776643 234555  688999999999999996 7889999999999999999988777777788


Q ss_pred             CCcEEEEEEecC-CCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEE
Q psy7108          91 LSDALCVAYKPD-GTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCIL  169 (703)
Q Consensus        91 ~~~V~~v~~spd-g~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~  169 (703)
                      .+.|.+|+|+|. +..++++...|.+.+||++....                   ......+|.++|.|+.|+|++.+||
T Consensus       176 SESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r-------------------~~~k~~AH~GpV~c~nwhPnr~~lA  236 (839)
T KOG0269|consen  176 SESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDR-------------------CEKKLTAHNGPVLCLNWHPNREWLA  236 (839)
T ss_pred             chhhhceeeccCCCceEEEecCCceEEEeeccCchh-------------------HHHHhhcccCceEEEeecCCCceee
Confidence            889999999994 57899999999999999985421                   2233445667999999999999999


Q ss_pred             EEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC-ccceeec
Q psy7108         170 AAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG-DMAARVL  248 (703)
Q Consensus       170 s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~-~~~~~~~  248 (703)
                      +||+|+.|+|||+.+++.......+..       .+|.+++|-|+.++.+++++..   .+..|++||++.. -+...+.
T Consensus       237 TGGRDK~vkiWd~t~~~~~~~~tInTi-------apv~rVkWRP~~~~hLAtcsmv---~dtsV~VWDvrRPYIP~~t~~  306 (839)
T KOG0269|consen  237 TGGRDKMVKIWDMTDSRAKPKHTINTI-------APVGRVKWRPARSYHLATCSMV---VDTSVHVWDVRRPYIPYATFL  306 (839)
T ss_pred             ecCCCccEEEEeccCCCccceeEEeec-------ceeeeeeeccCccchhhhhhcc---ccceEEEEeeccccccceeee
Confidence            999999999999987665444443333       4889999999998877766654   2358999999876 3455677


Q ss_pred             CCccceEEEEEcC-CCCEEEEEeCCC
Q psy7108         249 KPEVRVFCVKFSP-TGQAWVAATTEG  273 (703)
Q Consensus       249 ~h~~~V~~l~~sp-dg~~l~s~s~Dg  273 (703)
                      .|...++.++|.. |-..+.+++.||
T Consensus       307 eH~~~vt~i~W~~~d~~~l~s~sKD~  332 (839)
T KOG0269|consen  307 EHTDSVTGIAWDSGDRINLWSCSKDG  332 (839)
T ss_pred             ccCccccceeccCCCceeeEeecCcc
Confidence            8999999999966 344578999999

>KOG0310|consensus

Probab=99.85  E-value=4.4e-20  Score=187.91  Aligned_cols=222  Identities=23%  Similarity=0.266  Sum_probs=176.8

Q ss_pred             eecccCCceEEecCCceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCC
Q psy7108          13 RETHEGGNVVLKLPGVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLS   92 (703)
Q Consensus        13 ~~~~~~~~~~i~~~~v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~   92 (703)
                      +++..+..+.+++.+.+    +...+  +++.+|+.+|..+.|+|. ++..+++|++|+.+++||+.+......+.+|++
T Consensus        82 LlaaGD~sG~V~vfD~k----~r~iL--R~~~ah~apv~~~~f~~~-d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htD  154 (487)
T KOG0310|consen   82 LLAAGDESGHVKVFDMK----SRVIL--RQLYAHQAPVHVTKFSPQ-DNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTD  154 (487)
T ss_pred             EEEccCCcCcEEEeccc----cHHHH--HHHhhccCceeEEEeccc-CCeEEEecCCCceEEEEEcCCcEEEEEecCCcc
Confidence            44445555555555432    33456  899999999999999996 778889999999999999988876557778999


Q ss_pred             cEEEEEEecCCC-EEEEEECCCeEEEEEcCCC-cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEE
Q psy7108          93 DALCVAYKPDGT-EIVVATLDGQLIMFDVESA-AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILA  170 (703)
Q Consensus        93 ~V~~v~~spdg~-~las~s~dg~I~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s  170 (703)
                      .|.|.+|+|... .+++|+.||.|++||+++. ..+.++..                     +.+|..+.+-|.|..+++
T Consensus       155 YVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~elnh---------------------g~pVe~vl~lpsgs~ias  213 (487)
T KOG0310|consen  155 YVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVELNH---------------------GCPVESVLALPSGSLIAS  213 (487)
T ss_pred             eeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEecC---------------------CCceeeEEEcCCCCEEEE
Confidence            999999999654 7899999999999999987 44555543                     448999999999999998


Q ss_pred             EecCCcEEEEECCCCc-eEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC
Q psy7108         171 AGQSKYICIYSSREGI-LLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK  249 (703)
Q Consensus       171 ~s~dg~I~lwD~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~  249 (703)
                      ++. +.+++||+-+|. .+..+..        |...|+|+++..++..+++++-++      .+++||..+.+.+... .
T Consensus       214 AgG-n~vkVWDl~~G~qll~~~~~--------H~KtVTcL~l~s~~~rLlS~sLD~------~VKVfd~t~~Kvv~s~-~  277 (487)
T KOG0310|consen  214 AGG-NSVKVWDLTTGGQLLTSMFN--------HNKTVTCLRLASDSTRLLSGSLDR------HVKVFDTTNYKVVHSW-K  277 (487)
T ss_pred             cCC-CeEEEEEecCCceehhhhhc--------ccceEEEEEeecCCceEeeccccc------ceEEEEccceEEEEee-e
Confidence            875 679999999654 3333322        344899999999999999888764      8999998777666543 4


Q ss_pred             CccceEEEEEcCCCCEEEEEeCCC-EEEEE
Q psy7108         250 PEVRVFCVKFSPTGQAWVAATTEG-VHIYS  278 (703)
Q Consensus       250 h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd  278 (703)
                      ..++|.+++.+|+++.++.|..+| +.+-+
T Consensus       278 ~~~pvLsiavs~dd~t~viGmsnGlv~~rr  307 (487)
T KOG0310|consen  278 YPGPVLSIAVSPDDQTVVIGMSNGLVSIRR  307 (487)
T ss_pred             cccceeeEEecCCCceEEEecccceeeeeh
Confidence            567899999999999999999999 55443

>KOG0300|consensus

Probab=99.85  E-value=2.1e-20  Score=179.90  Aligned_cols=261  Identities=12%  Similarity=0.154  Sum_probs=199.4

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEc
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDV  120 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~  120 (703)
                      +.+.||.+.|+.++-..  ....+.++|.|.+.+||.++++.++....+|.+.|++++|++.+.++++++.|++..||..
T Consensus       142 re~~GHkDGiW~Vaa~~--tqpi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~  219 (481)
T KOG0300|consen  142 RELEGHKDGIWHVAADS--TQPICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKA  219 (481)
T ss_pred             hhhcccccceeeehhhc--CCcceeecccccceeEEeeccccceeeecccccceeeEEeccccceEEEccCCcchHHHHH
Confidence            78899999999999987  7789999999999999999999999999999999999999999999999999999999972


Q ss_pred             ------CCCcEEEE------E---eccccCCCCCCCCc-----cchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEE
Q psy7108         121 ------ESAAQVGS------V---EARRDLDSGRLDTD-----LVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIY  180 (703)
Q Consensus       121 ------~~~~~~~~------~---~~~~~~~~~~~~~~-----~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lw  180 (703)
                            ........      .   ..+.....+....+     .+.....+|.+.|.+..|-..|+.+++++.|.+..+|
T Consensus       220 av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlw  299 (481)
T KOG0300|consen  220 AVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLW  299 (481)
T ss_pred             hhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccceee
Confidence                  11100000      0   11111001111111     1223345688899999999999999999999999999


Q ss_pred             ECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC-ccceeecCCccceEEEEE
Q psy7108         181 SSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG-DMAARVLKPEVRVFCVKF  259 (703)
Q Consensus       181 D~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~-~~~~~~~~h~~~V~~l~~  259 (703)
                      |++++..+..+.+|..        .++.++-+|..+.+++++.+      .+.++||.+.. +.+..+.+|...|+++.|
T Consensus       300 DVEtge~v~~LtGHd~--------ELtHcstHptQrLVvTsSrD------tTFRLWDFReaI~sV~VFQGHtdtVTS~vF  365 (481)
T KOG0300|consen  300 DVETGEVVNILTGHDS--------ELTHCSTHPTQRLVVTSSRD------TTFRLWDFREAIQSVAVFQGHTDTVTSVVF  365 (481)
T ss_pred             eeccCceeccccCcch--------hccccccCCcceEEEEeccC------ceeEeccchhhcceeeeecccccceeEEEE
Confidence            9999999988776554        78888999999988887776      48999999854 456778899999999999


Q ss_pred             cCCCCEEEEEeCCC-EEEEEcCCCce-eccee-----eeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108         260 SPTGQAWVAATTEG-VHIYSLDSGYV-FDPFL-----LDISITPQSVKEALADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       260 spdg~~l~s~s~Dg-v~iwd~~~~~~-~~~~~-----~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~  321 (703)
                      .-|. .+++|++|. |+|||+.+... +..+.     ..++++..+  ..++.--....+++ ++++..
T Consensus       366 ~~dd-~vVSgSDDrTvKvWdLrNMRsplATIRtdS~~NRvavs~g~--~iIAiPhDNRqvRl-fDlnG~  430 (481)
T KOG0300|consen  366 NTDD-RVVSGSDDRTVKVWDLRNMRSPLATIRTDSPANRVAVSKGH--PIIAIPHDNRQVRL-FDLNGN  430 (481)
T ss_pred             ecCC-ceeecCCCceEEEeeeccccCcceeeecCCccceeEeecCC--ceEEeccCCceEEE-EecCCC
Confidence            8765 478999999 99999987543 22222     335555544  45555555567777 777644

>KOG0264|consensus

Probab=99.85  E-value=3.6e-20  Score=187.40  Aligned_cols=205  Identities=17%  Similarity=0.198  Sum_probs=163.3

Q ss_pred             cccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCce-------eEEEecCCCcEEEEEEecCC-CEEEEEECCC
Q psy7108          42 VLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDT-------QHETIQLLSDALCVAYKPDG-TEIVVATLDG  113 (703)
Q Consensus        42 ~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~-------~~~~~~~~~~V~~v~~spdg-~~las~s~dg  113 (703)
                      +|.||.+.-++++|++. ..-.|++|+.|++|.+||+.....       ...+..|...|..++|++-. ..+++++.|+
T Consensus       172 ~L~gH~~eg~glsWn~~-~~g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~  250 (422)
T KOG0264|consen  172 RLKGHEKEGYGLSWNRQ-QEGTLLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDG  250 (422)
T ss_pred             EEEeecccccccccccc-cceeEeeccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCC
Confidence            78999998899999996 667899999999999999975432       23445699999999999965 5788999999


Q ss_pred             eEEEEEcCC--CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC-CCCEEEEEecCCcEEEEECCCC-ceEE
Q psy7108         114 QLIMFDVES--AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA-DGSCILAAGQSKYICIYSSREG-ILLK  189 (703)
Q Consensus       114 ~I~vwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp-dg~~l~s~s~dg~I~lwD~~~~-~~~~  189 (703)
                      .+.|||+++  .+......+                    |.+.|.|++|+| ++..||+||.|++|++||+|+- +++.
T Consensus       251 ~L~iwD~R~~~~~~~~~~~a--------------------h~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh  310 (422)
T KOG0264|consen  251 KLMIWDTRSNTSKPSHSVKA--------------------HSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLH  310 (422)
T ss_pred             eEEEEEcCCCCCCCcccccc--------------------cCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCce
Confidence            999999995  334444444                    445999999999 5567788999999999999974 3444


Q ss_pred             EEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCc--------------cceeecCCccceE
Q psy7108         190 KFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGD--------------MAARVLKPEVRVF  255 (703)
Q Consensus       190 ~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~--------------~~~~~~~h~~~V~  255 (703)
                      ++.        +|.+.|.++.|||....++++++.+     +.+.+||+..-.              ++..-.+|...|.
T Consensus       311 ~~e--------~H~dev~~V~WSPh~etvLASSg~D-----~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~  377 (422)
T KOG0264|consen  311 TFE--------GHEDEVFQVEWSPHNETVLASSGTD-----RRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVS  377 (422)
T ss_pred             ecc--------CCCcceEEEEeCCCCCceeEecccC-----CcEEEEeccccccccChhhhccCCcceeEEecCcccccc
Confidence            444        4566999999999988777766543     589999987532              1234457899999


Q ss_pred             EEEEcCCCCEE-EEEeCCC-EEEEEcC
Q psy7108         256 CVKFSPTGQAW-VAATTEG-VHIYSLD  280 (703)
Q Consensus       256 ~l~~spdg~~l-~s~s~Dg-v~iwd~~  280 (703)
                      .+.|+|+..+. +++++|+ +.||...
T Consensus       378 DfsWnp~ePW~I~SvaeDN~LqIW~~s  404 (422)
T KOG0264|consen  378 DFSWNPNEPWTIASVAEDNILQIWQMA  404 (422)
T ss_pred             cccCCCCCCeEEEEecCCceEEEeecc
Confidence            99999998875 7888899 8999976

>KOG0308|consensus

Probab=99.84  E-value=6.7e-21  Score=199.37  Aligned_cols=246  Identities=13%  Similarity=0.244  Sum_probs=197.0

Q ss_pred             CCcCeE---EEEEcCCCCCCEEEEEeCCCcEEEEEcCCCce------eEEEecCCCcEEEEEEecCCCEEEEEECCCeEE
Q psy7108          46 HEGPVS---CIEFSPVLSSTGMVSASWDKTVKLWNAVETDT------QHETIQLLSDALCVAYKPDGTEIVVATLDGQLI  116 (703)
Q Consensus        46 H~~~V~---~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~------~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~  116 (703)
                      |...|.   ++..++. .+++|+|||.||.|++|++.....      ......|.+.|..++..-+|+.|++++.|-+|+
T Consensus        20 n~~~v~~~~~Lq~da~-~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK   98 (735)
T KOG0308|consen   20 NRNGVNITKALQLDAP-NGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVK   98 (735)
T ss_pred             ccccccchhhccccCC-CCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEE
Confidence            444455   4555553 677899999999999999864332      334455888999999999999999999999999


Q ss_pred             EEEcCCC--cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEE-cCCCCEEEEEecCCcEEEEECCCC--ceEEEE
Q psy7108         117 MFDVESA--AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCY-SADGSCILAAGQSKYICIYSSREG--ILLKKF  191 (703)
Q Consensus       117 vwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~-spdg~~l~s~s~dg~I~lwD~~~~--~~~~~~  191 (703)
                      +|+...+  -+..++..|.+                    .|.|+++ -++...+++||-|+.|.+||+.++  +.+.++
T Consensus        99 ~W~~~~~~~~c~stir~H~D--------------------YVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~  158 (735)
T KOG0308|consen   99 VWNAHKDNTFCMSTIRTHKD--------------------YVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASF  158 (735)
T ss_pred             EeecccCcchhHhhhhcccc--------------------hheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhc
Confidence            9999876  45666777766                    8999999 778889999999999999999988  344444


Q ss_pred             EeccCCccc-cccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEe
Q psy7108         192 TITQNKSLD-GINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAAT  270 (703)
Q Consensus       192 ~~~~~~~~~-~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s  270 (703)
                      ..-...++. |..+.+.+++.++.|..++.++..      +.+++||.++++.+..+.+|...|..+..++||+.+++++
T Consensus       159 n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgte------k~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~s  232 (735)
T KOG0308|consen  159 NNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTE------KDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSAS  232 (735)
T ss_pred             cccccccCCCCCccceeeeecCCcceEEEecCcc------cceEEeccccccceeeeeccccceEEEEEcCCCCeEeecC
Confidence            433333333 788899999999999776665554      4799999999999999999999999999999999999999


Q ss_pred             CCC-EEEEEcCCCceeccee------eeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108         271 TEG-VHIYSLDSGYVFDPFL------LDISITPQSVKEALADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       271 ~Dg-v~iwd~~~~~~~~~~~------~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~  321 (703)
                      .|| |++||+...+++..+.      +.+..+|+-  ..+-+|+.++.+.. -++..+
T Consensus       233 SDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~~~sf--~~vYsG~rd~~i~~-Tdl~n~  287 (735)
T KOG0308|consen  233 SDGTIRLWDLGQQRCLATYIVHKEGVWALQSSPSF--THVYSGGRDGNIYR-TDLRNP  287 (735)
T ss_pred             CCceEEeeeccccceeeeEEeccCceEEEeeCCCc--ceEEecCCCCcEEe-cccCCc
Confidence            999 9999998887766553      556666665  67788888888876 566555

>KOG0289|consensus

Probab=99.84  E-value=1.2e-19  Score=181.74  Aligned_cols=231  Identities=16%  Similarity=0.175  Sum_probs=198.1

Q ss_pred             cCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEE
Q psy7108          48 GPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVG  127 (703)
Q Consensus        48 ~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~  127 (703)
                      ..+.++...|  ..+.++||+.|+++.++|...++.+..+.+|...|+.+.++|+...+++++.|..|+||.........
T Consensus       220 pgi~ald~~~--s~~~ilTGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~~~  297 (506)
T KOG0289|consen  220 PGITALDIIP--SSSKILTGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSEPT  297 (506)
T ss_pred             CCeeEEeecC--CCCcceecCCCCceEEEecchhhhhhhccCcceEEEEEEeccchhheeecCCcceEEeeccccccCcc
Confidence            5688888888  77899999999999999998887778888899999999999999999999999999999998777666


Q ss_pred             EEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccce
Q psy7108         128 SVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFIN  207 (703)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~  207 (703)
                      ....|..                    +|+.+..+|.|.||++++.|++..+.|++++.++........      .-.++
T Consensus       298 ~~~~h~~--------------------~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s------~v~~t  351 (506)
T KOG0289|consen  298 SSRPHEE--------------------PVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETS------DVEYT  351 (506)
T ss_pred             ccccccc--------------------cceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccc------cceeE
Confidence            6666654                    899999999999999999999999999999988766553211      12578


Q ss_pred             eeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceec
Q psy7108         208 RRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFD  286 (703)
Q Consensus       208 ~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~  286 (703)
                      +.+|+|||-.+.+++.++      .+++||++.+.....+.+|.++|..++|+.+|-+|+++++|+ |++||++..+.+.
T Consensus       352 s~~fHpDgLifgtgt~d~------~vkiwdlks~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~k  425 (506)
T KOG0289|consen  352 SAAFHPDGLIFGTGTPDG------VVKIWDLKSQTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFK  425 (506)
T ss_pred             EeeEcCCceEEeccCCCc------eEEEEEcCCccccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccc
Confidence            999999999888877764      899999999999999999999999999999999999999999 9999998877666


Q ss_pred             cee-------eeEEEccchhhhHhhcCCcceEEEE
Q psy7108         287 PFL-------LDISITPQSVKEALADKDYAKALMM  314 (703)
Q Consensus       287 ~~~-------~~~~~spd~~~~~l~sg~~~~~l~l  314 (703)
                      .+.       .+++|.+.|  .++..++.+-.+..
T Consensus       426 t~~l~~~~~v~s~~fD~SG--t~L~~~g~~l~Vy~  458 (506)
T KOG0289|consen  426 TIQLDEKKEVNSLSFDQSG--TYLGIAGSDLQVYI  458 (506)
T ss_pred             eeeccccccceeEEEcCCC--CeEEeecceeEEEE
Confidence            554       357777777  77777665555444

>KOG0267|consensus

Probab=99.84  E-value=2.5e-21  Score=204.70  Aligned_cols=229  Identities=14%  Similarity=0.245  Sum_probs=200.0

Q ss_pred             cccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcC
Q psy7108          42 VLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVE  121 (703)
Q Consensus        42 ~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~  121 (703)
                      .+..|...|.|+..-.  .+..+++|++|..+-+|.+........+..|..+|.++.|+++...|++|+.+|+|++||++
T Consensus        23 ~~~~hsaav~~lk~~~--s~r~~~~Gg~~~k~~L~~i~kp~~i~S~~~hespIeSl~f~~~E~LlaagsasgtiK~wDle  100 (825)
T KOG0267|consen   23 EFVAHSAAVGCLKIRK--SSRSLVTGGEDEKVNLWAIGKPNAITSLTGHESPIESLTFDTSERLLAAGSASGTIKVWDLE  100 (825)
T ss_pred             hhhhhhhhhceeeeec--cceeeccCCCceeeccccccCCchhheeeccCCcceeeecCcchhhhcccccCCceeeeehh
Confidence            3457999999999865  88999999999999999998777777788999999999999999999999999999999999


Q ss_pred             CCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCcccc
Q psy7108         122 SAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDG  201 (703)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~  201 (703)
                      .++.++++.+|..                    .+..+.|+|-+.+.++|+.|..+++||.+..-|...+.+|.      
T Consensus       101 eAk~vrtLtgh~~--------------------~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~------  154 (825)
T KOG0267|consen  101 EAKIVRTLTGHLL--------------------NITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHT------  154 (825)
T ss_pred             hhhhhhhhhcccc--------------------CcceeeeccceEEeccccccccceehhhhccCceeeecCCc------
Confidence            9999999999876                    78999999999999999999999999999888888877544      


Q ss_pred             ccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcC
Q psy7108         202 INDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLD  280 (703)
Q Consensus       202 ~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~  280 (703)
                        ..+..+.|+|+|++++.++.+      ..+++||...|+....+..|++.+.++.|+|..-.+++|+.|+ +++||++
T Consensus       155 --~vv~~l~lsP~Gr~v~~g~ed------~tvki~d~~agk~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dle  226 (825)
T KOG0267|consen  155 --RVVDVLRLSPDGRWVASGGED------NTVKIWDLTAGKLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLE  226 (825)
T ss_pred             --ceeEEEeecCCCceeeccCCc------ceeeeecccccccccccccccccccccccCchhhhhccCCCCceeeeeccc
Confidence              378999999999998876653      5899999999999999999999999999999998899999999 9999998


Q ss_pred             CCceecce------eeeEEEccchhhhHhhcCCc
Q psy7108         281 SGYVFDPF------LLDISITPQSVKEALADKDY  308 (703)
Q Consensus       281 ~~~~~~~~------~~~~~~spd~~~~~l~sg~~  308 (703)
                      +-+.+...      +.+..|+|++  ..+.+|..
T Consensus       227 tfe~I~s~~~~~~~v~~~~fn~~~--~~~~~G~q  258 (825)
T KOG0267|consen  227 TFEVISSGKPETDGVRSLAFNPDG--KIVLSGEQ  258 (825)
T ss_pred             eeEEeeccCCccCCceeeeecCCc--eeeecCch
Confidence            76554332      3567888887  44555443

>KOG0299|consensus

Probab=99.84  E-value=4.4e-20  Score=186.52  Aligned_cols=251  Identities=17%  Similarity=0.275  Sum_probs=205.2

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEE-----------------E-ecCCCcEEEEEEecC
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHE-----------------T-IQLLSDALCVAYKPD  102 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~-----------------~-~~~~~~V~~v~~spd  102 (703)
                      +.+..|.-+|.|++++|  ++.+.++++.|++|.-|++.++.....                 . ..|...+.+++.|+|
T Consensus       136 ~~~~~H~~s~~~vals~--d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~D  213 (479)
T KOG0299|consen  136 RVIGKHQLSVTSVALSP--DDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSD  213 (479)
T ss_pred             eeeccccCcceEEEeec--cccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCC
Confidence            66788999999999999  999999999999999999987753210                 1 256778999999999


Q ss_pred             CCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEEC
Q psy7108         103 GTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSS  182 (703)
Q Consensus       103 g~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~  182 (703)
                      |++||+|+.|..|.|||.++.+.+..+.+|.+                    .|.+++|-.....+++++.|++|++|++
T Consensus       214 gkylatgg~d~~v~Iw~~~t~ehv~~~~ghr~--------------------~V~~L~fr~gt~~lys~s~Drsvkvw~~  273 (479)
T KOG0299|consen  214 GKYLATGGRDRHVQIWDCDTLEHVKVFKGHRG--------------------AVSSLAFRKGTSELYSASADRSVKVWSI  273 (479)
T ss_pred             CcEEEecCCCceEEEecCcccchhhccccccc--------------------ceeeeeeecCccceeeeecCCceEEEeh
Confidence            99999999999999999999999999988876                    8999999988888999999999999999


Q ss_pred             CCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCC
Q psy7108         183 REGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPT  262 (703)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spd  262 (703)
                      .....+.++-+        |.+.|..+....-++.+.+++.+      +++++|++.. +....+.++.+.+.|++|-. 
T Consensus       274 ~~~s~vetlyG--------Hqd~v~~IdaL~reR~vtVGgrD------rT~rlwKi~e-esqlifrg~~~sidcv~~In-  337 (479)
T KOG0299|consen  274 DQLSYVETLYG--------HQDGVLGIDALSRERCVTVGGRD------RTVRLWKIPE-ESQLIFRGGEGSIDCVAFIN-  337 (479)
T ss_pred             hHhHHHHHHhC--------CccceeeechhcccceEEecccc------ceeEEEeccc-cceeeeeCCCCCeeeEEEec-
Confidence            98776666554        44588888888888877776665      5999999943 33345667888999999964 


Q ss_pred             CCEEEEEeCCC-EEEEEcCCCceecc------------------eeeeEEEccchhhhHhhcCCcceEEEEEEecCchhH
Q psy7108         263 GQAWVAATTEG-VHIYSLDSGYVFDP------------------FLLDISITPQSVKEALADKDYAKALMMSLKLNEQGL  323 (703)
Q Consensus       263 g~~l~s~s~Dg-v~iwd~~~~~~~~~------------------~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~~~  323 (703)
                      ...+++|+.+| |.+|++...+++-.                  +..+++..|..  .++++|+.++.+++ |..++...
T Consensus       338 ~~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~s--dL~asGS~~G~vrL-W~i~~g~r  414 (479)
T KOG0299|consen  338 DEHFVSGSDNGSIALWSLLKKKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGS--DLLASGSWSGCVRL-WKIEDGLR  414 (479)
T ss_pred             ccceeeccCCceEEEeeecccCceeEeeccccccCCccccccccceeeeEecccC--ceEEecCCCCceEE-EEecCCcc
Confidence            46799999999 99999877654211                  34567777877  89999999999999 99987755


Q ss_pred             HHHHhhccC
Q psy7108         324 IIHVLENIR  332 (703)
Q Consensus       324 ~~~v~~~~~  332 (703)
                      ..+++..+|
T Consensus       415 ~i~~l~~ls  423 (479)
T KOG0299|consen  415 AINLLYSLS  423 (479)
T ss_pred             ccceeeecc
Confidence            555554444

>KOG0973|consensus

Probab=99.83  E-value=1.6e-19  Score=200.13  Aligned_cols=261  Identities=15%  Similarity=0.189  Sum_probs=190.9

Q ss_pred             ccCCCcCeEEEEEcCCCCCCEEEEEe--CCCcEEEEEcCC------------CceeEEEecCCCcEEEEEEecCCCEEEE
Q psy7108          43 LSGHEGPVSCIEFSPVLSSTGMVSAS--WDKTVKLWNAVE------------TDTQHETIQLLSDALCVAYKPDGTEIVV  108 (703)
Q Consensus        43 l~gH~~~V~~l~~sp~~dg~~L~sgs--~Dg~V~iWd~~~------------~~~~~~~~~~~~~V~~v~~spdg~~las  108 (703)
                      +..+...|.+++.+|  +|..++||+  .|+.++||+.+.            .+.+.+...|.+.|.|+.|+|||++||+
T Consensus         9 v~H~~~~IfSIdv~p--dg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAs   86 (942)
T KOG0973|consen    9 VNHNEKSIFSIDVHP--DGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLAS   86 (942)
T ss_pred             cccCCeeEEEEEecC--CceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEee
Confidence            344567799999999  999999999  899999998742            1123455669999999999999999999


Q ss_pred             EECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceE
Q psy7108         109 ATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILL  188 (703)
Q Consensus       109 ~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~  188 (703)
                      |++|+.|.||+.... .....-+...- ...-..........+|...|..++|+|++.+|++++.|++|.+||.++.+++
T Consensus        87 GSDD~~v~iW~~~~~-~~~~~fgs~g~-~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~  164 (942)
T KOG0973|consen   87 GSDDRLVMIWERAEI-GSGTVFGSTGG-AKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELL  164 (942)
T ss_pred             ccCcceEEEeeeccc-CCccccccccc-ccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccceee
Confidence            999999999998741 10000000000 0000011112233456779999999999999999999999999999999888


Q ss_pred             EEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCc------cceEEEEEcCC
Q psy7108         189 KKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPE------VRVFCVKFSPT  262 (703)
Q Consensus       189 ~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~------~~V~~l~~spd  262 (703)
                      +++.+|..        .|..+.|.|-|+++++-+.+      +++++|...+......+.++-      ..+..+.||||
T Consensus       165 ~vl~~H~s--------~VKGvs~DP~Gky~ASqsdD------rtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPD  230 (942)
T KOG0973|consen  165 KVLRGHQS--------LVKGVSWDPIGKYFASQSDD------RTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPD  230 (942)
T ss_pred             eeeecccc--------cccceEECCccCeeeeecCC------ceEEEEEcccceeeEeeccchhhCCCcceeeecccCCC
Confidence            88876665        88999999999999987765      699999987776766666543      34788999999


Q ss_pred             CCEEEEEeC--CC---EEEEEcCCCcee------cceeeeEEEccchh---------------hhHhhcCCcceEEEEEE
Q psy7108         263 GQAWVAATT--EG---VHIYSLDSGYVF------DPFLLDISITPQSV---------------KEALADKDYAKALMMSL  316 (703)
Q Consensus       263 g~~l~s~s~--Dg---v~iwd~~~~~~~------~~~~~~~~~spd~~---------------~~~l~sg~~~~~l~la~  316 (703)
                      |.+|++...  .+   +.|.+..+...-      ......+.|+|.-.               ...+|.|+.|+.+.+ |
T Consensus       231 G~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSV-W  309 (942)
T KOG0973|consen  231 GHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSV-W  309 (942)
T ss_pred             cCeecchhhccCCcceeEEEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEE-E
Confidence            999987643  22   678777665542      22235567776211               126788999999998 8


Q ss_pred             ecCchh
Q psy7108         317 KLNEQG  322 (703)
Q Consensus       317 ~l~~~~  322 (703)
                      ....++
T Consensus       310 ~T~~~R  315 (942)
T KOG0973|consen  310 NTALPR  315 (942)
T ss_pred             ecCCCC
Confidence            765443

>KOG1036|consensus

Probab=99.83  E-value=7e-19  Score=169.87  Aligned_cols=250  Identities=13%  Similarity=0.174  Sum_probs=190.9

Q ss_pred             EEeeecccCCceEEecCC--ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEE
Q psy7108          10 IETRETHEGGNVVLKLPG--VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHET   87 (703)
Q Consensus        10 ~~~~~~~~~~~~~i~~~~--v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~   87 (703)
                      -...|...++..++..|+  ++.++.....+  +..-.|..++.+++|.+   ...+++|+-||.|+.+|+.++ ....+
T Consensus        17 S~v~f~~~~~~LLvssWDgslrlYdv~~~~l--~~~~~~~~plL~c~F~d---~~~~~~G~~dg~vr~~Dln~~-~~~~i   90 (323)
T KOG1036|consen   17 SSVKFSPSSSDLLVSSWDGSLRLYDVPANSL--KLKFKHGAPLLDCAFAD---ESTIVTGGLDGQVRRYDLNTG-NEDQI   90 (323)
T ss_pred             eeEEEcCcCCcEEEEeccCcEEEEeccchhh--hhheecCCceeeeeccC---CceEEEeccCceEEEEEecCC-cceee
Confidence            345677788899999999  66677655555  56667999999999985   678999999999999999887 45666


Q ss_pred             ecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCE
Q psy7108          88 IQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSC  167 (703)
Q Consensus        88 ~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~  167 (703)
                      ..|..+|.|+.+++-...+++|+.|++|++||.++......+...+                     .|.++..+  |+.
T Consensus        91 gth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~~k---------------------kVy~~~v~--g~~  147 (323)
T KOG1036|consen   91 GTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFDQGK---------------------KVYCMDVS--GNR  147 (323)
T ss_pred             ccCCCceEEEEeeccCCeEEEcccCccEEEEeccccccccccccCc---------------------eEEEEecc--CCE
Confidence            7799999999999988899999999999999999755555544432                     68877665  788


Q ss_pred             EEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC--ccce
Q psy7108         168 ILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG--DMAA  245 (703)
Q Consensus       168 l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~--~~~~  245 (703)
                      |++|+.|..+.+||+++........      ....+..+.++++-|.+..+++++-+|    +..+-.+|....  +...
T Consensus       148 LvVg~~~r~v~iyDLRn~~~~~q~r------eS~lkyqtR~v~~~pn~eGy~~sSieG----RVavE~~d~s~~~~skky  217 (323)
T KOG1036|consen  148 LVVGTSDRKVLIYDLRNLDEPFQRR------ESSLKYQTRCVALVPNGEGYVVSSIEG----RVAVEYFDDSEEAQSKKY  217 (323)
T ss_pred             EEEeecCceEEEEEcccccchhhhc------cccceeEEEEEEEecCCCceEEEeecc----eEEEEccCCchHHhhhce
Confidence            9999999999999999754322111      123445788999999888888877654    345666665511  1122


Q ss_pred             eecCCc---------cceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecce------eeeEEEccch
Q psy7108         246 RVLKPE---------VRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPF------LLDISITPQS  298 (703)
Q Consensus       246 ~~~~h~---------~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~------~~~~~~spd~  298 (703)
                      .+..|.         -+|++++|+|-...|+||+.|| |.+||..+.+.+..+      ...++|+.+|
T Consensus       218 aFkCHr~~~~~~~~~yPVNai~Fhp~~~tfaTgGsDG~V~~Wd~~~rKrl~q~~~~~~SI~slsfs~dG  286 (323)
T KOG1036|consen  218 AFKCHRLSEKDTEIIYPVNAIAFHPIHGTFATGGSDGIVNIWDLFNRKRLKQLAKYETSISSLSFSMDG  286 (323)
T ss_pred             eEEeeecccCCceEEEEeceeEeccccceEEecCCCceEEEccCcchhhhhhccCCCCceEEEEeccCC
Confidence            233332         3699999999999999999999 999999887664443      3568888888

>KOG1539|consensus

Probab=99.83  E-value=6.2e-19  Score=189.55  Aligned_cols=199  Identities=13%  Similarity=0.125  Sum_probs=172.6

Q ss_pred             ccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEE---ecCCCcEEEEEEecCCCEEEEEECCCeEEEEE
Q psy7108          43 LSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHET---IQLLSDALCVAYKPDGTEIVVATLDGQLIMFD  119 (703)
Q Consensus        43 l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~---~~~~~~V~~v~~spdg~~las~s~dg~I~vwd  119 (703)
                      ++.-...+++++.++  .|++.+.|...|+|-+++++++-.....   ..|.++|++++...-++.+++++.+|.+++||
T Consensus       444 ~~~~~~~~~av~vs~--CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~  521 (910)
T KOG1539|consen  444 FKKDDINATAVCVSF--CGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWD  521 (910)
T ss_pred             ccccCcceEEEEEec--cCceEEEeccCCeEEEEEcccCeeecccccCccccCceeEEEecCCCceEEEccCcceEEEEe
Confidence            333457899999999  9999999999999999999988554444   36999999999999899999999999999999


Q ss_pred             cCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCcc
Q psy7108         120 VESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSL  199 (703)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~  199 (703)
                      ..+...+..++-..                     .+.++.++.....++.+..|-.|.++|+.+.+.++.|.+|.+   
T Consensus       522 f~~k~l~~~l~l~~---------------------~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~n---  577 (910)
T KOG1539|consen  522 FKKKVLKKSLRLGS---------------------SITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGN---  577 (910)
T ss_pred             cCCcceeeeeccCC---------------------CcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhcccc---
Confidence            99888777766533                     678888998888999999999999999999999998887666   


Q ss_pred             ccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC--EEEE
Q psy7108         200 DGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG--VHIY  277 (703)
Q Consensus       200 ~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg--v~iw  277 (703)
                           .|+.++|||||+++++++.++      +|++||+.++.++..+. -+.++.++.|||+|.+|||+..|+  |++|
T Consensus       578 -----ritd~~FS~DgrWlisasmD~------tIr~wDlpt~~lID~~~-vd~~~~sls~SPngD~LAT~Hvd~~gIylW  645 (910)
T KOG1539|consen  578 -----RITDMTFSPDGRWLISASMDS------TIRTWDLPTGTLIDGLL-VDSPCTSLSFSPNGDFLATVHVDQNGIYLW  645 (910)
T ss_pred             -----ceeeeEeCCCCcEEEEeecCC------cEEEEeccCcceeeeEe-cCCcceeeEECCCCCEEEEEEecCceEEEE
Confidence                 899999999999999998874      89999999998765443 456788999999999999999986  9999


Q ss_pred             Ec
Q psy7108         278 SL  279 (703)
Q Consensus       278 d~  279 (703)
                      .-
T Consensus       646 sN  647 (910)
T KOG1539|consen  646 SN  647 (910)
T ss_pred             Ec
Confidence            74

>KOG1274|consensus

Probab=99.83  E-value=1.4e-18  Score=189.06  Aligned_cols=259  Identities=14%  Similarity=0.167  Sum_probs=200.6

Q ss_pred             EEeeecccCCceEEecCC--ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEE
Q psy7108          10 IETRETHEGGNVVLKLPG--VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHET   87 (703)
Q Consensus        10 ~~~~~~~~~~~~~i~~~~--v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~   87 (703)
                      ...++++.|...+..-.+  +++|+.....-.|.++.-|...|.+++..    +++|++|+.+++|.++.+.+++.-..+
T Consensus        17 t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~----s~~f~~~s~~~tv~~y~fps~~~~~iL   92 (933)
T KOG1274|consen   17 TLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIACY----SNHFLTGSEQNTVLRYKFPSGEEDTIL   92 (933)
T ss_pred             EEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEeec----ccceEEeeccceEEEeeCCCCCcccee
Confidence            344556666644443322  66665333212346666688899998875    469999999999999999888665566


Q ss_pred             ecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCE
Q psy7108          88 IQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSC  167 (703)
Q Consensus        88 ~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~  167 (703)
                      ....-++.+++|+-+|+++|.|+.|-.|++.++.+......+++|..                    +|.++.|+|++++
T Consensus        93 ~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~a--------------------pVl~l~~~p~~~f  152 (933)
T KOG1274|consen   93 ARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDA--------------------PVLQLSYDPKGNF  152 (933)
T ss_pred             eeeeccceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCC--------------------ceeeeeEcCCCCE
Confidence            66788999999999999999999999999999999999999999876                    9999999999999


Q ss_pred             EEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceee
Q psy7108         168 ILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARV  247 (703)
Q Consensus       168 l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~  247 (703)
                      ||+.+-||.|++||+.++.+..++..-....-.-....+..++|+|+|..+++.+.++      .|++|+...++....+
T Consensus       153 LAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~------~Vkvy~r~~we~~f~L  226 (933)
T KOG1274|consen  153 LAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDN------TVKVYSRKGWELQFKL  226 (933)
T ss_pred             EEEEecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCC------eEEEEccCCceeheee
Confidence            9999999999999999998887776433211111134678899999977666666553      8999999999877666


Q ss_pred             cC--CccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceec--ceeeeEEEccch
Q psy7108         248 LK--PEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFD--PFLLDISITPQS  298 (703)
Q Consensus       248 ~~--h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~--~~~~~~~~spd~  298 (703)
                      ..  +...+..++|+|+|+|||+++.|| |.|||.++-..+.  ..+.+++|.|+.
T Consensus       227 r~~~~ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv~t~~~~~~~~~Vc~~aw~p~~  282 (933)
T KOG1274|consen  227 RDKLSSSKFSDLQWSPNGKYIAASTLDGQILVWNVDTHERHEFKRAVCCEAWKPNA  282 (933)
T ss_pred             cccccccceEEEEEcCCCcEEeeeccCCcEEEEecccchhccccceeEEEecCCCC
Confidence            53  444599999999999999999999 9999999744322  223556777765

>KOG0639|consensus

Probab=99.83  E-value=5.5e-20  Score=186.81  Aligned_cols=253  Identities=14%  Similarity=0.211  Sum_probs=197.7

Q ss_pred             cCCceEEecCCceeeccCCCccccccccC--CCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeE-E-EecCCC
Q psy7108          17 EGGNVVLKLPGVKKGDMAARVLKPEVLSG--HEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQH-E-TIQLLS   92 (703)
Q Consensus        17 ~~~~~~i~~~~v~~~d~tg~~~~~~~l~g--H~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~-~-~~~~~~   92 (703)
                      .|+...|++|++..- .+...+  ..|..  ...-|+++...|  ||+.|++|+.-.++.|||+....... . +....-
T Consensus       436 TgGkgcVKVWdis~p-g~k~Pv--sqLdcl~rdnyiRSckL~p--dgrtLivGGeastlsiWDLAapTprikaeltssap  510 (705)
T KOG0639|consen  436 TGGKGCVKVWDISQP-GNKSPV--SQLDCLNRDNYIRSCKLLP--DGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAP  510 (705)
T ss_pred             ecCCCeEEEeeccCC-CCCCcc--ccccccCcccceeeeEecC--CCceEEeccccceeeeeeccCCCcchhhhcCCcch
Confidence            455666777766532 111222  33332  356799999999  99999999999999999997654322 1 122233


Q ss_pred             cEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe
Q psy7108          93 DALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG  172 (703)
Q Consensus        93 ~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s  172 (703)
                      .+.+++.+||.+..++++.||.|.|||+.+...++.+.+|.+                    .+.||.+++||..|-+|+
T Consensus       511 aCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtD--------------------GascIdis~dGtklWTGG  570 (705)
T KOG0639|consen  511 ACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD--------------------GASCIDISKDGTKLWTGG  570 (705)
T ss_pred             hhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCC--------------------CceeEEecCCCceeecCC
Confidence            567799999999999999999999999999999999999987                    899999999999999999


Q ss_pred             cCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCcc
Q psy7108         173 QSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEV  252 (703)
Q Consensus       173 ~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~  252 (703)
                      -|++|+.||+++++.+....         ..+.|.++..+|.+.+++++..++      .+.+-.. ++.....+.-|+.
T Consensus       571 lDntvRcWDlregrqlqqhd---------F~SQIfSLg~cP~~dWlavGMens------~vevlh~-skp~kyqlhlheS  634 (705)
T KOG0639|consen  571 LDNTVRCWDLREGRQLQQHD---------FSSQIFSLGYCPTGDWLAVGMENS------NVEVLHT-SKPEKYQLHLHES  634 (705)
T ss_pred             Cccceeehhhhhhhhhhhhh---------hhhhheecccCCCccceeeecccC------cEEEEec-CCccceeeccccc
Confidence            99999999999987655433         345789999999999999988764      3444433 3344556677899


Q ss_pred             ceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecc-----eeeeEEEccchhhhHhhcCCcceEE
Q psy7108         253 RVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDP-----FLLDISITPQSVKEALADKDYAKAL  312 (703)
Q Consensus       253 ~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~-----~~~~~~~spd~~~~~l~sg~~~~~l  312 (703)
                      .|.++.|++.|+++++.+.|. +..|...-|..+-.     -++++++|.|.  .++.+|+.++.-
T Consensus       635 cVLSlKFa~cGkwfvStGkDnlLnawrtPyGasiFqskE~SsVlsCDIS~dd--kyIVTGSGdkkA  698 (705)
T KOG0639|consen  635 CVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISFDD--KYIVTGSGDKKA  698 (705)
T ss_pred             EEEEEEecccCceeeecCchhhhhhccCccccceeeccccCcceeeeeccCc--eEEEecCCCcce
Confidence            999999999999999999999 89999988765322     24678888888  889999888543

>KOG1332|consensus

Probab=99.83  E-value=1.1e-19  Score=169.73  Aligned_cols=244  Identities=15%  Similarity=0.170  Sum_probs=187.3

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCce---eEEEecCCCcEEEEEEec--CCCEEEEEECCCeE
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDT---QHETIQLLSDALCVAYKP--DGTEIVVATLDGQL  115 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~---~~~~~~~~~~V~~v~~sp--dg~~las~s~dg~I  115 (703)
                      ++-+.|.+.|..+...-  .|..|||||.|++|||+.++....   +.++.+|.++|..++|..  -|..||+++.||.|
T Consensus         5 ~idt~H~D~IHda~lDy--ygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkV   82 (299)
T KOG1332|consen    5 TIDTQHEDMIHDAQLDY--YGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKV   82 (299)
T ss_pred             ehhhhhhhhhhHhhhhh--hcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceE
Confidence            45578999999988888  899999999999999999986653   456778999999999976  78999999999999


Q ss_pred             EEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC--CCEEEEEecCCcEEEEECCCC-ceEEEEE
Q psy7108         116 IMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD--GSCILAAGQSKYICIYSSREG-ILLKKFT  192 (703)
Q Consensus       116 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd--g~~l~s~s~dg~I~lwD~~~~-~~~~~~~  192 (703)
                      .||.-.+++-.+..                  ....|...|++++|.|.  |-.|++++.||.|.+.+.++. .-..   
T Consensus        83 IiWke~~g~w~k~~------------------e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t---  141 (299)
T KOG1332|consen   83 IIWKEENGRWTKAY------------------EHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTT---  141 (299)
T ss_pred             EEEecCCCchhhhh------------------hhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccc---
Confidence            99998777322111                  12335668999999985  567889999999999998764 1111   


Q ss_pred             eccCCccccccccceeeeeccC---C-----------CEEEEEcccCCCCCeeEEECCCCCCC--ccceeecCCccceEE
Q psy7108         193 ITQNKSLDGINDFINRRKMTEF---G-----------NVSLIETRETHEGGNVVLKLPGVKKG--DMAARVLKPEVRVFC  256 (703)
Q Consensus       193 ~~~~~~~~~~~~~v~~~~~spd---g-----------~~l~~~~~~~~~~~~~~i~iwd~~~~--~~~~~~~~h~~~V~~  256 (703)
                         .....+|.-.|++++|.|.   |           +.++.++.+      +.|++|+...+  .....+.+|.+.|+.
T Consensus       142 ---~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcD------n~VkiW~~~~~~w~~e~~l~~H~dwVRD  212 (299)
T KOG1332|consen  142 ---SKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCD------NLVKIWKFDSDSWKLERTLEGHKDWVRD  212 (299)
T ss_pred             ---hhhhhccccccceeeecCcCCCccccccCcccccceeeccCCc------cceeeeecCCcchhhhhhhhhcchhhhh
Confidence               1123456668899999986   4           334544443      58999987765  444568899999999


Q ss_pred             EEEcCCC----CEEEEEeCCC-EEEEEcCCC------cee---cceeeeEEEccchhhhHhhcCCcceEEEEEEecC
Q psy7108         257 VKFSPTG----QAWVAATTEG-VHIYSLDSG------YVF---DPFLLDISITPQSVKEALADKDYAKALMMSLKLN  319 (703)
Q Consensus       257 l~~spdg----~~l~s~s~Dg-v~iwd~~~~------~~~---~~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~  319 (703)
                      ++|.|.-    .++|+++.|| +.||..+..      ..+   ......++||+.|  ..|+.+..+..+.+ |+-+
T Consensus       213 VAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~e~wk~tll~~f~~~~w~vSWS~sG--n~LaVs~GdNkvtl-wke~  286 (299)
T KOG1332|consen  213 VAWAPSVGLPKSTIASCSQDGTVIIWTKDEEYEPWKKTLLEEFPDVVWRVSWSLSG--NILAVSGGDNKVTL-WKEN  286 (299)
T ss_pred             hhhccccCCCceeeEEecCCCcEEEEEecCccCcccccccccCCcceEEEEEeccc--cEEEEecCCcEEEE-EEeC
Confidence            9999974    4789999999 999987632      112   2234779999999  88888888888887 7654

>KOG1332|consensus

Probab=99.82  E-value=1.3e-19  Score=169.21  Aligned_cols=241  Identities=16%  Similarity=0.232  Sum_probs=178.1

Q ss_pred             ceeeEEeeecccCCceEEecCCceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc--e
Q psy7108           6 NVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD--T   83 (703)
Q Consensus         6 ~~~~~~~~~~~~~~~~~i~~~~v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~--~   83 (703)
                      ..+..-.+.+.+++++.|++..++.-. ..+++  ..|.||.+||..++|...+-|.+||||+.||.|.||.-+++.  +
T Consensus        18 ~lDyygkrlATcsSD~tVkIf~v~~n~-~s~ll--~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k   94 (299)
T KOG1332|consen   18 QLDYYGKRLATCSSDGTVKIFEVRNNG-QSKLL--AELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWTK   94 (299)
T ss_pred             hhhhhcceeeeecCCccEEEEEEcCCC-Cceee--eEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchhh
Confidence            344555677788899999988777321 12566  899999999999999643479999999999999999977663  2


Q ss_pred             eEEEecCCCcEEEEEEecCC--CEEEEEECCCeEEEEEcCCCc---EEEEEeccccCCCCCCCCccchhhcccCCccEEE
Q psy7108          84 QHETIQLLSDALCVAYKPDG--TEIVVATLDGQLIMFDVESAA---QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVST  158 (703)
Q Consensus        84 ~~~~~~~~~~V~~v~~spdg--~~las~s~dg~I~vwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~  158 (703)
                      ......|...|++++|.|.+  -.|++++.||.|.|.+.++..   .......                    |.-.|++
T Consensus        95 ~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~a--------------------H~~Gvns  154 (299)
T KOG1332|consen   95 AYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFA--------------------HEIGVNS  154 (299)
T ss_pred             hhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhc--------------------cccccce
Confidence            23445689999999999975  588999999999999887541   1122223                    3448999


Q ss_pred             EEEcCC---C-----------CEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCC---C-EEEE
Q psy7108         159 VCYSAD---G-----------SCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFG---N-VSLI  220 (703)
Q Consensus       159 i~~spd---g-----------~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg---~-~l~~  220 (703)
                      ++|.|-   |           +.|++|+.|+.|+||+..+++-+..      ..+.+|.++|+.++|.|.-   + +++.
T Consensus       155 Vswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e------~~l~~H~dwVRDVAwaP~~gl~~s~iAS  228 (299)
T KOG1332|consen  155 VSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLE------RTLEGHKDWVRDVAWAPSVGLPKSTIAS  228 (299)
T ss_pred             eeecCcCCCccccccCcccccceeeccCCccceeeeecCCcchhhh------hhhhhcchhhhhhhhccccCCCceeeEE
Confidence            999985   4           6699999999999999987632211      1255677899999999974   2 3444


Q ss_pred             EcccCCCCCeeEEECCCCCCC--c-cceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCC
Q psy7108         221 ETRETHEGGNVVLKLPGVKKG--D-MAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDS  281 (703)
Q Consensus       221 ~~~~~~~~~~~~i~iwd~~~~--~-~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~  281 (703)
                      ++.+      +.+.||..+..  + ....+......++.+.||+.|+.|+.++.|. +.+|.-+.
T Consensus       229 ~SqD------g~viIwt~~~e~e~wk~tll~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~~  287 (299)
T KOG1332|consen  229 CSQD------GTVIIWTKDEEYEPWKKTLLEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWKENV  287 (299)
T ss_pred             ecCC------CcEEEEEecCccCcccccccccCCcceEEEEEeccccEEEEecCCcEEEEEEeCC
Confidence            4433      37889954421  1 1223334567899999999999999888888 99998554

>KOG0267|consensus

Probab=99.82  E-value=2.3e-20  Score=197.48  Aligned_cols=218  Identities=17%  Similarity=0.278  Sum_probs=187.7

Q ss_pred             ccCCceEEecCCceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEE
Q psy7108          16 HEGGNVVLKLPGVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDAL   95 (703)
Q Consensus        16 ~~~~~~~i~~~~v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~   95 (703)
                      ..|.+..+.+|.+...    ..+  ..|.+|..+|.|+.|++  +..+|++|+.||+|++||++....++.+.+|...+.
T Consensus        45 ~Gg~~~k~~L~~i~kp----~~i--~S~~~hespIeSl~f~~--~E~LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~  116 (825)
T KOG0267|consen   45 TGGEDEKVNLWAIGKP----NAI--TSLTGHESPIESLTFDT--SERLLAAGSASGTIKVWDLEEAKIVRTLTGHLLNIT  116 (825)
T ss_pred             cCCCceeeccccccCC----chh--heeeccCCcceeeecCc--chhhhcccccCCceeeeehhhhhhhhhhhccccCcc
Confidence            4555666667765522    222  34789999999999999  999999999999999999999888888899999999


Q ss_pred             EEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCC
Q psy7108          96 CVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSK  175 (703)
Q Consensus        96 ~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg  175 (703)
                      ++.|+|-+.+.|.|+.|+.+++||++...+...+.+|..                    .|.++.|+|+|+++++++.|.
T Consensus       117 sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~--------------------vv~~l~lsP~Gr~v~~g~ed~  176 (825)
T KOG0267|consen  117 SVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTR--------------------VVDVLRLSPDGRWVASGGEDN  176 (825)
T ss_pred             eeeeccceEEeccccccccceehhhhccCceeeecCCcc--------------------eeEEEeecCCCceeeccCCcc
Confidence            999999999999999999999999998888888888654                    789999999999999999999


Q ss_pred             cEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceE
Q psy7108         176 YICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVF  255 (703)
Q Consensus       176 ~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~  255 (703)
                      ++++||...|+....|..|.+        .+.++.|+|..-.+..++.+      .++++||+++.+.+.........|.
T Consensus       177 tvki~d~~agk~~~ef~~~e~--------~v~sle~hp~e~Lla~Gs~d------~tv~f~dletfe~I~s~~~~~~~v~  242 (825)
T KOG0267|consen  177 TVKIWDLTAGKLSKEFKSHEG--------KVQSLEFHPLEVLLAPGSSD------RTVRFWDLETFEVISSGKPETDGVR  242 (825)
T ss_pred             eeeeecccccccccccccccc--------cccccccCchhhhhccCCCC------ceeeeeccceeEEeeccCCccCCce
Confidence            999999999999988876655        77788888887766666555      5999999999888877777788899


Q ss_pred             EEEEcCCCCEEEEEeCCCEE
Q psy7108         256 CVKFSPTGQAWVAATTEGVH  275 (703)
Q Consensus       256 ~l~~spdg~~l~s~s~Dgv~  275 (703)
                      +.+|+|++..+++|..+.+.
T Consensus       243 ~~~fn~~~~~~~~G~q~sl~  262 (825)
T KOG0267|consen  243 SLAFNPDGKIVLSGEQISLS  262 (825)
T ss_pred             eeeecCCceeeecCchhhhh
Confidence            99999999999988877644

>KOG2096|consensus

Probab=99.81  E-value=2e-18  Score=166.83  Aligned_cols=242  Identities=14%  Similarity=0.245  Sum_probs=175.7

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCce-----eEEEe---------------------------
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDT-----QHETI---------------------------   88 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~-----~~~~~---------------------------   88 (703)
                      .+|+||.+.|++++|+.  ||+.|+|++.|++||+|++++-..     ++...                           
T Consensus        80 ~~LKgH~~~vt~~~FsS--dGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l  157 (420)
T KOG2096|consen   80 SVLKGHKKEVTDVAFSS--DGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKL  157 (420)
T ss_pred             hhhhccCCceeeeEEcC--CCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEE
Confidence            67899999999999999  999999999999999999864210     00000                           


Q ss_pred             ---------------------------cCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCC
Q psy7108          89 ---------------------------QLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLD  141 (703)
Q Consensus        89 ---------------------------~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~  141 (703)
                                                 .|.-.+..+...-.+++|++++.|..|.+|+++ |+.+.++.....       
T Consensus       158 ~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~-------  229 (420)
T KOG2096|consen  158 CVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQS-------  229 (420)
T ss_pred             EEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-Cceeeeeccccc-------
Confidence                                       011123344444566788999999999999998 888888776543       


Q ss_pred             CccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEE
Q psy7108         142 TDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIE  221 (703)
Q Consensus       142 ~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~  221 (703)
                                   .-+..+.||+|+++++++-.-.|++|.+--++--.-.+...-..+.||.+.|...+|+++.+.+++.
T Consensus       230 -------------~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtv  296 (420)
T KOG2096|consen  230 -------------SNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTV  296 (420)
T ss_pred             -------------cccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEE
Confidence                         4567889999999999998888999986322110000111224567888899999999999999998


Q ss_pred             cccCCCCCeeEEECCCCCCC----ccceeec-------CCccceEEEEEcCCCCEEEEEeCCCEEEEEcCCCceecce--
Q psy7108         222 TRETHEGGNVVLKLPGVKKG----DMAARVL-------KPEVRVFCVKFSPTGQAWVAATTEGVHIYSLDSGYVFDPF--  288 (703)
Q Consensus       222 ~~~~~~~~~~~i~iwd~~~~----~~~~~~~-------~h~~~V~~l~~spdg~~l~s~s~Dgv~iwd~~~~~~~~~~--  288 (703)
                      +.+|      .+++||..-.    +-...+.       .-.+....++.||+|+.||.+....+++|..++|+..+.+  
T Consensus       297 SkDG------~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~gs~l~~~~se~g~~~~~~e~  370 (420)
T KOG2096|consen  297 SKDG------KWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSFGSDLKVFASEDGKDYPELED  370 (420)
T ss_pred             ecCC------cEEEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeecCCceEEEEcccCccchhHHH
Confidence            8875      8999986532    1111111       1123345899999999998887666999999988876555  


Q ss_pred             -----eeeEEEccchhhhHhhcCCcceEEEE
Q psy7108         289 -----LLDISITPQSVKEALADKDYAKALMM  314 (703)
Q Consensus       289 -----~~~~~~spd~~~~~l~sg~~~~~l~l  314 (703)
                           ..+++|+++|  .++++++. +.+++
T Consensus       371 ~h~~~Is~is~~~~g--~~~atcGd-r~vrv  398 (420)
T KOG2096|consen  371 IHSTTISSISYSSDG--KYIATCGD-RYVRV  398 (420)
T ss_pred             hhcCceeeEEecCCC--cEEeeecc-eeeee
Confidence                 3679999999  78887764 45555

>KOG0646|consensus

Probab=99.81  E-value=1.7e-18  Score=175.56  Aligned_cols=206  Identities=15%  Similarity=0.252  Sum_probs=168.7

Q ss_pred             CcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCC----
Q psy7108          47 EGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVES----  122 (703)
Q Consensus        47 ~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~----  122 (703)
                      .++|.|++-+|  +|.+|+.|...|.+.+|.+.+|..+.....|-..|+|+.|+-||.+|++|+.||.|.+|++..    
T Consensus        81 Pg~v~al~s~n--~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a  158 (476)
T KOG0646|consen   81 PGPVHALASSN--LGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSA  158 (476)
T ss_pred             ccceeeeecCC--CceEEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeeccc
Confidence            57899999999  999999998999999999999977767778999999999999999999999999999998742    


Q ss_pred             -----CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC--CCEEEEEecCCcEEEEECCCCceEEEEEecc
Q psy7108         123 -----AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD--GSCILAAGQSKYICIYSSREGILLKKFTITQ  195 (703)
Q Consensus       123 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd--g~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~  195 (703)
                           -++...+..                    |.-+|+++...+.  ...++++|.|.++++||+..+..+.++..  
T Consensus       159 ~~~~~~~p~~~f~~--------------------HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~f--  216 (476)
T KOG0646|consen  159 DNDHSVKPLHIFSD--------------------HTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTITF--  216 (476)
T ss_pred             ccCCCccceeeecc--------------------CcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEec--
Confidence                 223333433                    4558999888764  46799999999999999999998888763  


Q ss_pred             CCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCC----------------CccceeecCCcc--ceEEE
Q psy7108         196 NKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKK----------------GDMAARVLKPEV--RVFCV  257 (703)
Q Consensus       196 ~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~----------------~~~~~~~~~h~~--~V~~l  257 (703)
                             ...+.+++.+|.++.+++++.+|      .|.+.++.+                +.....+.+|.+  .|+|+
T Consensus       217 -------p~si~av~lDpae~~~yiGt~~G------~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcL  283 (476)
T KOG0646|consen  217 -------PSSIKAVALDPAERVVYIGTEEG------KIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCL  283 (476)
T ss_pred             -------CCcceeEEEcccccEEEecCCcc------eEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEE
Confidence                   23789999999999999988875      343333221                123445667877  89999


Q ss_pred             EEcCCCCEEEEEeCCC-EEEEEcCCCceeccee
Q psy7108         258 KFSPTGQAWVAATTEG-VHIYSLDSGYVFDPFL  289 (703)
Q Consensus       258 ~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~~  289 (703)
                      +.+-||..|++|+.|| |+|||..+.++++...
T Consensus       284 ais~DgtlLlSGd~dg~VcvWdi~S~Q~iRtl~  316 (476)
T KOG0646|consen  284 AISTDGTLLLSGDEDGKVCVWDIYSKQCIRTLQ  316 (476)
T ss_pred             EEecCccEEEeeCCCCCEEEEecchHHHHHHHh
Confidence            9999999999999999 9999998887765543

>KOG0301|consensus

Probab=99.80  E-value=1.4e-18  Score=183.54  Aligned_cols=200  Identities=19%  Similarity=0.323  Sum_probs=169.4

Q ss_pred             CCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCC
Q psy7108          34 AARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDG  113 (703)
Q Consensus        34 tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg  113 (703)
                      ++.++  .+|.||...|.|++...  ++. ++|||+|.++++|-...  ......+|...|.+++.-|++ .+++|+.|+
T Consensus        90 ~~~P~--~~LkgH~snVC~ls~~~--~~~-~iSgSWD~TakvW~~~~--l~~~l~gH~asVWAv~~l~e~-~~vTgsaDK  161 (745)
T KOG0301|consen   90 QAEPL--YTLKGHKSNVCSLSIGE--DGT-LISGSWDSTAKVWRIGE--LVYSLQGHTASVWAVASLPEN-TYVTGSADK  161 (745)
T ss_pred             CCCch--hhhhccccceeeeecCC--cCc-eEecccccceEEecchh--hhcccCCcchheeeeeecCCC-cEEeccCcc
Confidence            55667  89999999999999876  666 99999999999998643  345577899999999999988 789999999


Q ss_pred             eEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEe
Q psy7108         114 QLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTI  193 (703)
Q Consensus       114 ~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~  193 (703)
                      +|++|.-  ++.++++.+|.+                    .|..+++-+++ .+++|+.||.|++|++ +|.++..+.+
T Consensus       162 tIklWk~--~~~l~tf~gHtD--------------------~VRgL~vl~~~-~flScsNDg~Ir~w~~-~ge~l~~~~g  217 (745)
T KOG0301|consen  162 TIKLWKG--GTLLKTFSGHTD--------------------CVRGLAVLDDS-HFLSCSNDGSIRLWDL-DGEVLLEMHG  217 (745)
T ss_pred             eeeeccC--Cchhhhhccchh--------------------heeeeEEecCC-CeEeecCCceEEEEec-cCceeeeeec
Confidence            9999975  788899999887                    89999999875 4889999999999999 6888888776


Q ss_pred             ccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC
Q psy7108         194 TQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG  273 (703)
Q Consensus       194 ~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg  273 (703)
                      |.+        .+.+++..+++..+++++.+      +++++|+..  ++.+.+.-+...||++.+-++|+ +++|++||
T Consensus       218 htn--------~vYsis~~~~~~~Ivs~gED------rtlriW~~~--e~~q~I~lPttsiWsa~~L~NgD-Ivvg~SDG  280 (745)
T KOG0301|consen  218 HTN--------FVYSISMALSDGLIVSTGED------RTLRIWKKD--ECVQVITLPTTSIWSAKVLLNGD-IVVGGSDG  280 (745)
T ss_pred             cce--------EEEEEEecCCCCeEEEecCC------ceEEEeecC--ceEEEEecCccceEEEEEeeCCC-EEEeccCc
Confidence            655        89999988888877776655      599999866  77777777777999999999987 67788899


Q ss_pred             -EEEEEcCCC
Q psy7108         274 -VHIYSLDSG  282 (703)
Q Consensus       274 -v~iwd~~~~  282 (703)
                       |+||..+..
T Consensus       281 ~VrVfT~~k~  290 (745)
T KOG0301|consen  281 RVRVFTVDKD  290 (745)
T ss_pred             eEEEEEeccc
Confidence             999998743

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.80  E-value=2.1e-17  Score=172.08  Aligned_cols=261  Identities=12%  Similarity=0.148  Sum_probs=185.7

Q ss_pred             ecccCCceEEecCCceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEE-EEEeCCCcEEEEEcCCCceeEEEecCCC
Q psy7108          14 ETHEGGNVVLKLPGVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGM-VSASWDKTVKLWNAVETDTQHETIQLLS   92 (703)
Q Consensus        14 ~~~~~~~~~i~~~~v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L-~sgs~Dg~V~iWd~~~~~~~~~~~~~~~   92 (703)
                      +...+.+..+.+|+..    +++++  ..+.+|.. +.+++|+|  ++..+ ++++.|+.|++||..+++....+.. ..
T Consensus         4 ~~s~~~d~~v~~~d~~----t~~~~--~~~~~~~~-~~~l~~~~--dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~-~~   73 (300)
T TIGR03866         4 YVSNEKDNTISVIDTA----TLEVT--RTFPVGQR-PRGITLSK--DGKLLYVCASDSDTIQVIDLATGEVIGTLPS-GP   73 (300)
T ss_pred             EEEecCCCEEEEEECC----CCceE--EEEECCCC-CCceEECC--CCCEEEEEECCCCeEEEEECCCCcEEEeccC-CC
Confidence            3344455566666554    67777  77776644 67899999  88876 5677889999999988765444433 34


Q ss_pred             cEEEEEEecCCCEEEEE-ECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEE
Q psy7108          93 DALCVAYKPDGTEIVVA-TLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAA  171 (703)
Q Consensus        93 ~V~~v~~spdg~~las~-s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~  171 (703)
                      .+..++|+|+++.++++ +.|+.|++||+++++.+..+....                     .+.+++|+|+|+.++++
T Consensus        74 ~~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~~~~---------------------~~~~~~~~~dg~~l~~~  132 (300)
T TIGR03866        74 DPELFALHPNGKILYIANEDDNLVTVIDIETRKVLAEIPVGV---------------------EPEGMAVSPDGKIVVNT  132 (300)
T ss_pred             CccEEEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEeeCCC---------------------CcceEEECCCCCEEEEE
Confidence            46788999999977655 568999999999887776665322                     35789999999999998


Q ss_pred             ecCC-cEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCC
Q psy7108         172 GQSK-YICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKP  250 (703)
Q Consensus       172 s~dg-~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h  250 (703)
                      +.++ .+..||.++++........         .....++|+|+|+.+++++..+     ..+++||+.+++....+..+
T Consensus       133 ~~~~~~~~~~d~~~~~~~~~~~~~---------~~~~~~~~s~dg~~l~~~~~~~-----~~v~i~d~~~~~~~~~~~~~  198 (300)
T TIGR03866       133 SETTNMAHFIDTKTYEIVDNVLVD---------QRPRFAEFTADGKELWVSSEIG-----GTVSVIDVATRKVIKKITFE  198 (300)
T ss_pred             ecCCCeEEEEeCCCCeEEEEEEcC---------CCccEEEECCCCCEEEEEcCCC-----CEEEEEEcCcceeeeeeeec
Confidence            8765 4778899887765544311         1346789999999887765422     37999999988766554321


Q ss_pred             c-------cceEEEEEcCCCCEEEEE-eCCC-EEEEEcCCCceecce-----eeeEEEccchhhhHhhcC-CcceEEEEE
Q psy7108         251 E-------VRVFCVKFSPTGQAWVAA-TTEG-VHIYSLDSGYVFDPF-----LLDISITPQSVKEALADK-DYAKALMMS  315 (703)
Q Consensus       251 ~-------~~V~~l~~spdg~~l~s~-s~Dg-v~iwd~~~~~~~~~~-----~~~~~~spd~~~~~l~sg-~~~~~l~la  315 (703)
                      .       .....++|+|++++++++ +.++ +.+||+.+++.....     ..+++|+|++  ..+..+ ..++.+.+ 
T Consensus       199 ~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~g--~~l~~~~~~~~~i~v-  275 (300)
T TIGR03866       199 IPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKTYEVLDYLLVGQRVWQLAFTPDE--KYLLTTNGVSNDVSV-  275 (300)
T ss_pred             ccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEeCCCcceEEECCCC--CEEEEEcCCCCeEEE-
Confidence            1       123568899999986443 4444 999999887765432     3568999999  555554 45777887 


Q ss_pred             EecCchh
Q psy7108         316 LKLNEQG  322 (703)
Q Consensus       316 ~~l~~~~  322 (703)
                      |++....
T Consensus       276 ~d~~~~~  282 (300)
T TIGR03866       276 IDVAALK  282 (300)
T ss_pred             EECCCCc
Confidence            8887643

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG0647|consensus

Probab=99.80  E-value=1e-17  Score=161.13  Aligned_cols=238  Identities=13%  Similarity=0.139  Sum_probs=180.9

Q ss_pred             EecCC--ceeecc--CCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEE
Q psy7108          23 LKLPG--VKKGDM--AARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVA   98 (703)
Q Consensus        23 i~~~~--v~~~d~--tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~   98 (703)
                      ...|+  |++|+.  +|... ++....|.++|.+++|+.  ||..+++|+.|+.+++||+.++ +..++..|.++|.++.
T Consensus        45 A~SWD~tVR~wevq~~g~~~-~ka~~~~~~PvL~v~Wsd--dgskVf~g~~Dk~~k~wDL~S~-Q~~~v~~Hd~pvkt~~  120 (347)
T KOG0647|consen   45 AGSWDGTVRIWEVQNSGQLV-PKAQQSHDGPVLDVCWSD--DGSKVFSGGCDKQAKLWDLASG-QVSQVAAHDAPVKTCH  120 (347)
T ss_pred             ecccCCceEEEEEecCCccc-chhhhccCCCeEEEEEcc--CCceEEeeccCCceEEEEccCC-CeeeeeecccceeEEE
Confidence            44566  677763  34554 567778999999999999  9999999999999999999998 6788888999999999


Q ss_pred             EecCCC--EEEEEECCCeEEEEEcCCCcEEEEEeccccCCCC---------------------CCCCccchhhcccCCcc
Q psy7108          99 YKPDGT--EIVVATLDGQLIMFDVESAAQVGSVEARRDLDSG---------------------RLDTDLVTREQSLKAKA  155 (703)
Q Consensus        99 ~spdg~--~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~  155 (703)
                      |-+...  .|++|+.|++|+.||++...++.++.-....-..                     ...........+...-.
T Consensus       121 wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeRvYa~Dv~~pm~vVata~r~i~vynL~n~~te~k~~~SpLk~Q  200 (347)
T KOG0647|consen  121 WVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPERVYAADVLYPMAVVATAERHIAVYNLENPPTEFKRIESPLKWQ  200 (347)
T ss_pred             EecCCCcceeEecccccceeecccCCCCeeeeeeccceeeehhccCceeEEEecCCcEEEEEcCCCcchhhhhcCcccce
Confidence            987765  8999999999999999988877766543211100                     01111111111222346


Q ss_pred             EEEEEEcCCCCEEEEEecCCcEEEEECCCCce--EEEEEeccCCc-cccccccceeeeeccCCCEEEEEcccCCCCCeeE
Q psy7108         156 VSTVCYSADGSCILAAGQSKYICIYSSREGIL--LKKFTITQNKS-LDGINDFINRRKMTEFGNVSLIETRETHEGGNVV  232 (703)
Q Consensus       156 V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~--~~~~~~~~~~~-~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~  232 (703)
                      +.|++..+|....+.|+-.|.+.+..+..+..  -.+|+.|.... ..+.-..|++++|+|.-..+++.+++|      +
T Consensus       201 ~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hgtlvTaGsDG------t  274 (347)
T KOG0647|consen  201 TRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHGTLVTAGSDG------T  274 (347)
T ss_pred             eeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEeecccceEEEecCCc------e
Confidence            88999999888889999999999998887633  33444444322 222235789999999988888888875      8


Q ss_pred             EECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEe
Q psy7108         233 LKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAAT  270 (703)
Q Consensus       233 i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s  270 (703)
                      ..+||-.....+.....|..+|++.+|+.+|.++|-+.
T Consensus       275 f~FWDkdar~kLk~s~~~~qpItcc~fn~~G~ifaYA~  312 (347)
T KOG0647|consen  275 FSFWDKDARTKLKTSETHPQPITCCSFNRNGSIFAYAL  312 (347)
T ss_pred             EEEecchhhhhhhccCcCCCccceeEecCCCCEEEEEe
Confidence            99999887777777788999999999999999986554

>KOG1539|consensus

Probab=99.80  E-value=1.4e-17  Score=179.27  Aligned_cols=273  Identities=18%  Similarity=0.248  Sum_probs=206.5

Q ss_pred             EecCCceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecC
Q psy7108          23 LKLPGVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPD  102 (703)
Q Consensus        23 i~~~~v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spd  102 (703)
                      +.+||++    +++.+  .++.++...|+++.=+|  --+.+|.|..+|+|.+++++.++.+..+....+.|++++|..|
T Consensus       184 lql~Nvr----t~K~v--~~f~~~~s~IT~ieqsP--aLDVVaiG~~~G~ViifNlK~dkil~sFk~d~g~VtslSFrtD  255 (910)
T KOG1539|consen  184 LQLWNVR----TGKVV--YTFQEFFSRITAIEQSP--ALDVVAIGLENGTVIIFNLKFDKILMSFKQDWGRVTSLSFRTD  255 (910)
T ss_pred             EEEEEec----cCcEE--EEecccccceeEeccCC--cceEEEEeccCceEEEEEcccCcEEEEEEccccceeEEEeccC
Confidence            4456665    89999  99999999999999999  8899999999999999999998766665555699999999999


Q ss_pred             CC-EEEEEECCCeEEEEEcCCCcEEEEEe-cc----------------------------------------------cc
Q psy7108         103 GT-EIVVATLDGQLIMFDVESAAQVGSVE-AR----------------------------------------------RD  134 (703)
Q Consensus       103 g~-~las~s~dg~I~vwd~~~~~~~~~~~-~~----------------------------------------------~~  134 (703)
                      |. .+|+|+..|.+.+||++..+....+. .|                                              ..
T Consensus       256 G~p~las~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg~pR~LR~R~GHs~  335 (910)
T KOG1539|consen  256 GNPLLASGRSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDSGDGVPRLLRSRGGHSA  335 (910)
T ss_pred             CCeeEEeccCCceEEEEEcCCCeeeeeeeccccCCcccceecCCCceEeeccCCCceeEEEeeCCCCcchheeeccCCCC
Confidence            97 56677777999999998755433332 11                                              00


Q ss_pred             CCC--------C---------C----------------CC---------Cccc---------------------------
Q psy7108         135 LDS--------G---------R----------------LD---------TDLV---------------------------  145 (703)
Q Consensus       135 ~~~--------~---------~----------------~~---------~~~~---------------------------  145 (703)
                      ...        +         +                .+         ....                           
T Consensus       336 Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~  415 (910)
T KOG1539|consen  336 PPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVI  415 (910)
T ss_pred             CchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhhhccee
Confidence            000        0         0                00         0000                           


Q ss_pred             --------------hhhcc-----c------CCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccc
Q psy7108         146 --------------TREQS-----L------KAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLD  200 (703)
Q Consensus       146 --------------~~~~~-----~------~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~  200 (703)
                                    .....     .      -...+++++.++-|++.+.|+..|+|-+|++++|.....|..     -.
T Consensus       416 ~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~-----~~  490 (910)
T KOG1539|consen  416 TAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGD-----SP  490 (910)
T ss_pred             EEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEcccCeeeccccc-----Cc
Confidence                          00000     0      124688899999999999999999999999999987777741     12


Q ss_pred             cccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCc--------------------------------------
Q psy7108         201 GINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGD--------------------------------------  242 (703)
Q Consensus       201 ~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~--------------------------------------  242 (703)
                      .|...|+.++...-++.+++++.+|      .+++||..+..                                      
T Consensus       491 ah~~~V~gla~D~~n~~~vsa~~~G------ilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~  564 (910)
T KOG1539|consen  491 AHKGEVTGLAVDGTNRLLVSAGADG------ILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVV  564 (910)
T ss_pred             cccCceeEEEecCCCceEEEccCcc------eEEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCceeEEEEEch
Confidence            3566899999998888888887765      67777665532                                      


Q ss_pred             ---cceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceeccee-----eeEEEccchhhhHhhcCCcc-eEE
Q psy7108         243 ---MAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPFL-----LDISITPQSVKEALADKDYA-KAL  312 (703)
Q Consensus       243 ---~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~~-----~~~~~spd~~~~~l~sg~~~-~~l  312 (703)
                         .++.+.+|.+.|++++|||||++|++++.|+ |++||+.++.+++.+.     ..++++|.+  .+|++...+ ..+
T Consensus       565 t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~vd~~~~sls~SPng--D~LAT~Hvd~~gI  642 (910)
T KOG1539|consen  565 TRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLLVDSPCTSLSFSPNG--DFLATVHVDQNGI  642 (910)
T ss_pred             hhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeEecCCcceeeEECCCC--CEEEEEEecCceE
Confidence               2344567999999999999999999999999 9999999999987765     569999999  888887777 444


Q ss_pred             EEEEe
Q psy7108         313 MMSLK  317 (703)
Q Consensus       313 ~la~~  317 (703)
                      .+ |.
T Consensus       643 yl-Ws  646 (910)
T KOG1539|consen  643 YL-WS  646 (910)
T ss_pred             EE-EE
Confidence            44 64

>KOG0299|consensus

Probab=99.80  E-value=2e-18  Score=174.71  Aligned_cols=218  Identities=11%  Similarity=0.190  Sum_probs=180.8

Q ss_pred             cCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCC
Q psy7108          44 SGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESA  123 (703)
Q Consensus        44 ~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~  123 (703)
                      ++|...|.+++.+|  ||.+||||+.|..|.||+.++.+.+..+..|.+.|.+++|......+++++.|++|++|+++..
T Consensus       199 ~~h~keil~~avS~--Dgkylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~  276 (479)
T KOG0299|consen  199 KGHVKEILTLAVSS--DGKYLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQL  276 (479)
T ss_pred             ccccceeEEEEEcC--CCcEEEecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHh
Confidence            48999999999999  9999999999999999999999888888899999999999988889999999999999999988


Q ss_pred             cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCcccccc
Q psy7108         124 AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGIN  203 (703)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~  203 (703)
                      ..+.++-+|.+                    .|..|.-..-++.+-+|+.|+++++|++... ....|.++        .
T Consensus       277 s~vetlyGHqd--------------------~v~~IdaL~reR~vtVGgrDrT~rlwKi~ee-sqlifrg~--------~  327 (479)
T KOG0299|consen  277 SYVETLYGHQD--------------------GVLGIDALSRERCVTVGGRDRTVRLWKIPEE-SQLIFRGG--------E  327 (479)
T ss_pred             HHHHHHhCCcc--------------------ceeeechhcccceEEeccccceeEEEecccc-ceeeeeCC--------C
Confidence            88888888776                    8888888888888888889999999999543 22334433        3


Q ss_pred             ccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC-C-----------ccceEEEEEcCCCCEEEEEeC
Q psy7108         204 DFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK-P-----------EVRVFCVKFSPTGQAWVAATT  271 (703)
Q Consensus       204 ~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~-h-----------~~~V~~l~~spdg~~l~s~s~  271 (703)
                      ..+.+++|-.+.. +++++.+|      .|.+|++.+.+++..... |           ...|++++..|..+.+|+|+.
T Consensus       328 ~sidcv~~In~~H-fvsGSdnG------~IaLWs~~KKkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~  400 (479)
T KOG0299|consen  328 GSIDCVAFINDEH-FVSGSDNG------SIALWSLLKKKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSW  400 (479)
T ss_pred             CCeeeEEEecccc-eeeccCCc------eEEEeeecccCceeEeeccccccCCccccccccceeeeEecccCceEEecCC
Confidence            4788899887765 45555553      899999988877654431 1           237999999999999999999


Q ss_pred             CC-EEEEEcCCCce---------ecceeeeEEEccchh
Q psy7108         272 EG-VHIYSLDSGYV---------FDPFLLDISITPQSV  299 (703)
Q Consensus       272 Dg-v~iwd~~~~~~---------~~~~~~~~~~spd~~  299 (703)
                      +| |++|.+..+-.         +..++.+++|++++.
T Consensus       401 ~G~vrLW~i~~g~r~i~~l~~ls~~GfVNsl~f~~sgk  438 (479)
T KOG0299|consen  401 SGCVRLWKIEDGLRAINLLYSLSLVGFVNSLAFSNSGK  438 (479)
T ss_pred             CCceEEEEecCCccccceeeecccccEEEEEEEccCCC
Confidence            99 99999988721         334457788999883

>KOG0264|consensus

Probab=99.80  E-value=1.9e-18  Score=175.04  Aligned_cols=240  Identities=13%  Similarity=0.191  Sum_probs=182.3

Q ss_pred             cCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCce----------eEEEecCCCcEEEEEEecCCC-EEEEEECC
Q psy7108          44 SGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDT----------QHETIQLLSDALCVAYKPDGT-EIVVATLD  112 (703)
Q Consensus        44 ~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~----------~~~~~~~~~~V~~v~~spdg~-~las~s~d  112 (703)
                      -.|.+.|+.++.-|. +...+|+.+..+.|.|||..+...          -..+.+|...-++++|++... .+++++.|
T Consensus       121 i~h~gEVnRaRymPQ-np~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d  199 (422)
T KOG0264|consen  121 INHDGEVNRARYMPQ-NPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDD  199 (422)
T ss_pred             ccCCccchhhhhCCC-CCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCC
Confidence            469999999999995 667888889999999999864321          125677888788899998654 78999999


Q ss_pred             CeEEEEEcCCCcE-------EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC-CCEEEEEecCCcEEEEECCC
Q psy7108         113 GQLIMFDVESAAQ-------VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD-GSCILAAGQSKYICIYSSRE  184 (703)
Q Consensus       113 g~I~vwd~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd-g~~l~s~s~dg~I~lwD~~~  184 (703)
                      ++|.+||+.....       ...+.+|                    ...|..++|++- ...+++++.|+.+.|||+|+
T Consensus       200 ~~i~lwdi~~~~~~~~~~~p~~~~~~h--------------------~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~  259 (422)
T KOG0264|consen  200 HTICLWDINAESKEDKVVDPKTIFSGH--------------------EDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRS  259 (422)
T ss_pred             CcEEEEeccccccCCccccceEEeecC--------------------CcceehhhccccchhhheeecCCCeEEEEEcCC
Confidence            9999999975432       2334444                    458999999994 56677899999999999996


Q ss_pred             C--ceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC-ccceeecCCccceEEEEEcC
Q psy7108         185 G--ILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG-DMAARVLKPEVRVFCVKFSP  261 (703)
Q Consensus       185 ~--~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~-~~~~~~~~h~~~V~~l~~sp  261 (703)
                      +  ++.+        ...+|...+++++|+|.+..++++++.+     ++|++||+++- +++..+.+|+..|..|.|||
T Consensus       260 ~~~~~~~--------~~~ah~~~vn~~~fnp~~~~ilAT~S~D-----~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSP  326 (422)
T KOG0264|consen  260 NTSKPSH--------SVKAHSAEVNCVAFNPFNEFILATGSAD-----KTVALWDLRNLNKPLHTFEGHEDEVFQVEWSP  326 (422)
T ss_pred             CCCCCcc--------cccccCCceeEEEeCCCCCceEEeccCC-----CcEEEeechhcccCceeccCCCcceEEEEeCC
Confidence            3  3222        3445667999999999998877776643     58999999975 57788899999999999999


Q ss_pred             CCC-EEEEEeCCC-EEEEEcCCCceecc------------e--------eeeEEEccchhhhHhhcCCcceEEEEEEecC
Q psy7108         262 TGQ-AWVAATTEG-VHIYSLDSGYVFDP------------F--------LLDISITPQSVKEALADKDYAKALMMSLKLN  319 (703)
Q Consensus       262 dg~-~l~s~s~Dg-v~iwd~~~~~~~~~------------~--------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~  319 (703)
                      ... .||+++.|+ +.|||+..-...+.            |        +.+++|.|..- -.+++...|..+.+ |+..
T Consensus       327 h~etvLASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~eP-W~I~SvaeDN~LqI-W~~s  404 (422)
T KOG0264|consen  327 HNETVLASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEP-WTIASVAEDNILQI-WQMA  404 (422)
T ss_pred             CCCceeEecccCCcEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCC-eEEEEecCCceEEE-eecc
Confidence            764 579999999 99999864322211            1        24577777662 24556666777776 7765

>KOG1063|consensus

Probab=99.79  E-value=1.7e-17  Score=175.28  Aligned_cols=285  Identities=15%  Similarity=0.225  Sum_probs=209.9

Q ss_pred             EeeecccCCceEEecCCceeeccCC--------------------Cccc-----cccccCCCcCeEEEEEcCCCCCCEEE
Q psy7108          11 ETRETHEGGNVVLKLPGVKKGDMAA--------------------RVLK-----PEVLSGHEGPVSCIEFSPVLSSTGMV   65 (703)
Q Consensus        11 ~~~~~~~~~~~~i~~~~v~~~d~tg--------------------~~~~-----~~~l~gH~~~V~~l~~sp~~dg~~L~   65 (703)
                      ..+.+..+.+..|++|.+.+++..+                    ..+.     -..+.||++.|+++.|+|  .+..|+
T Consensus       206 ~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~eall~GHeDWV~sv~W~p--~~~~LL  283 (764)
T KOG1063|consen  206 DLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISFEALLMGHEDWVYSVWWHP--EGLDLL  283 (764)
T ss_pred             cEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEehhhhhcCcccceEEEEEcc--chhhhe
Confidence            4566678889999999999887333                    1110     023459999999999999  898999


Q ss_pred             EEeCCCcEEEEEcCCCceeE----E---EecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCC---cEEEEEeccccC
Q psy7108          66 SASWDKTVKLWNAVETDTQH----E---TIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESA---AQVGSVEARRDL  135 (703)
Q Consensus        66 sgs~Dg~V~iWd~~~~~~~~----~---~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~---~~~~~~~~~~~~  135 (703)
                      |+|.|+++.+|...+..-+.    +   .-+....-.+.-|+|++..+++-+..|..++|.....   .+...+.+    
T Consensus       284 SASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~Gg~hlWkt~d~~~w~~~~~iSG----  359 (764)
T KOG1063|consen  284 SASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRTGGFHLWKTKDKTFWTQEPVISG----  359 (764)
T ss_pred             ecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEecccCcEEEEeccCccceeecccccc----
Confidence            99999999999876552221    1   1123445788999999999999999999999983222   22233334    


Q ss_pred             CCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCC-------------------------------
Q psy7108         136 DSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSRE-------------------------------  184 (703)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~-------------------------------  184 (703)
                                      |.+.|.+++|+|.|.+|++.+.|.+-+++-.-.                               
T Consensus       360 ----------------H~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn~~~~FV  423 (764)
T KOG1063|consen  360 ----------------HVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVNEDLQFV  423 (764)
T ss_pred             ----------------ccccceeeeecCCCCEEEEeccccceeeecccccccceeeecccccccccceeeehccCCceee
Confidence                            344777777777777777777776666653210                               


Q ss_pred             ----CceEEEEEeccC----------------------------------------------------------------
Q psy7108         185 ----GILLKKFTITQN----------------------------------------------------------------  196 (703)
Q Consensus       185 ----~~~~~~~~~~~~----------------------------------------------------------------  196 (703)
                          .+.++.|+.+..                                                                
T Consensus       424 SgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L~eP  503 (764)
T KOG1063|consen  424 SGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCELTEP  503 (764)
T ss_pred             ecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchhccCC
Confidence                011111110000                                                                


Q ss_pred             ---------------CccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcC
Q psy7108         197 ---------------KSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSP  261 (703)
Q Consensus       197 ---------------~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~sp  261 (703)
                                     ..+-||...|.+++.+|+|+.+++++... ......|++|+..+....+.+.+|.-.|+.++|||
T Consensus       504 P~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~-~~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l~FSp  582 (764)
T KOG1063|consen  504 PTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSS-LKEHAVIRLWNTANWLQVQELEGHSLTVTRLAFSP  582 (764)
T ss_pred             ChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhC-CccceEEEEEeccchhhhheecccceEEEEEEECC
Confidence                           11347777899999999999999888654 23346799999999998989999999999999999


Q ss_pred             CCCEEEEEeCCC-EEEEEcCCC----------ceecceeeeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108         262 TGQAWVAATTEG-VHIYSLDSG----------YVFDPFLLDISITPQSVKEALADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       262 dg~~l~s~s~Dg-v~iwd~~~~----------~~~~~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~  321 (703)
                      ||++|++++.|. +.+|....+          +.+.....+.+|+|++  .++++++.|+.+++ |...+.
T Consensus       583 dg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde--~~FaTaSRDK~VkV-W~~~~~  650 (764)
T KOG1063|consen  583 DGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDE--KYFATASRDKKVKV-WEEPDL  650 (764)
T ss_pred             CCcEEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCccc--ceeEEecCCceEEE-EeccCc
Confidence            999999999999 999986543          3356667899999999  77999999999999 887644

>KOG1408|consensus

Probab=99.79  E-value=2.1e-18  Score=181.77  Aligned_cols=223  Identities=15%  Similarity=0.206  Sum_probs=182.9

Q ss_pred             CcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecC---CCEEEEEECCCeEEEEEcCCC
Q psy7108          47 EGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPD---GTEIVVATLDGQLIMFDVESA  123 (703)
Q Consensus        47 ~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spd---g~~las~s~dg~I~vwd~~~~  123 (703)
                      .-.+.+++.+|  +|++||+|..-|++||+++...+.....-.|...|.|+.|+..   .++||+++.|..|+|+|+...
T Consensus       459 r~G~R~~~vSp--~gqhLAsGDr~GnlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rn  536 (1080)
T KOG1408|consen  459 RFGFRALAVSP--DGQHLASGDRGGNLRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRN  536 (1080)
T ss_pred             ccceEEEEECC--CcceecccCccCceEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecccc
Confidence            45799999999  9999999999999999999888777777789999999999852   478999999999999998543


Q ss_pred             -cEEEEEeccccCCC----------------CCCC------------Ccc-chhhcccCCccEEEEEEcCCCCEEEEEec
Q psy7108         124 -AQVGSVEARRDLDS----------------GRLD------------TDL-VTREQSLKAKAVSTVCYSADGSCILAAGQ  173 (703)
Q Consensus       124 -~~~~~~~~~~~~~~----------------~~~~------------~~~-~~~~~~~~~~~V~~i~~spdg~~l~s~s~  173 (703)
                       ..++++.+|.....                +...            ... ....+......+..++..|..+++++++.
T Consensus       537 y~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQ  616 (1080)
T KOG1408|consen  537 YDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQ  616 (1080)
T ss_pred             cchhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEec
Confidence             44555555543111                0000            000 01111223456889999999999999999


Q ss_pred             CCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccc
Q psy7108         174 SKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVR  253 (703)
Q Consensus       174 dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~  253 (703)
                      |..|+|||+.+++..+.|++...     ++...-.+...|.|-++++++++      +++.++|..+|+++.+..+|...
T Consensus       617 Drnirif~i~sgKq~k~FKgs~~-----~eG~lIKv~lDPSgiY~atScsd------ktl~~~Df~sgEcvA~m~GHsE~  685 (1080)
T KOG1408|consen  617 DRNIRIFDIESGKQVKSFKGSRD-----HEGDLIKVILDPSGIYLATSCSD------KTLCFVDFVSGECVAQMTGHSEA  685 (1080)
T ss_pred             ccceEEEeccccceeeeeccccc-----CCCceEEEEECCCccEEEEeecC------CceEEEEeccchhhhhhcCcchh
Confidence            99999999999999999987654     44567778899999999999987      58999999999999999999999


Q ss_pred             eEEEEEcCCCCEEEEEeCCC-EEEEEcCCC
Q psy7108         254 VFCVKFSPTGQAWVAATTEG-VHIYSLDSG  282 (703)
Q Consensus       254 V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~  282 (703)
                      |+.+.|.+|.+.|++++.|| |.||.+...
T Consensus       686 VTG~kF~nDCkHlISvsgDgCIFvW~lp~~  715 (1080)
T KOG1408|consen  686 VTGVKFLNDCKHLISVSGDGCIFVWKLPLT  715 (1080)
T ss_pred             eeeeeecccchhheeecCCceEEEEECchh
Confidence            99999999999999999999 999998753

>KOG2445|consensus

Probab=99.78  E-value=3.2e-17  Score=158.08  Aligned_cols=261  Identities=15%  Similarity=0.159  Sum_probs=180.2

Q ss_pred             ccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc----eeEEEecCCCcEEEEEEecC--CCEEEEEECCCeEE
Q psy7108          43 LSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD----TQHETIQLLSDALCVAYKPD--GTEIVVATLDGQLI  116 (703)
Q Consensus        43 l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~----~~~~~~~~~~~V~~v~~spd--g~~las~s~dg~I~  116 (703)
                      -.+|.+-|.|+.|.+  .|+.+||||.|++|+|||.++..    +......|.+.|..+.|.+-  |+.+|+++.|+++.
T Consensus         9 ~s~h~DlihdVs~D~--~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~   86 (361)
T KOG2445|consen    9 DSGHKDLIHDVSFDF--YGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVS   86 (361)
T ss_pred             ccCCcceeeeeeecc--cCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCcee
Confidence            468999999999999  99999999999999999975443    34455679999999999763  78999999999999


Q ss_pred             EEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC--CCEEEEEecCCcEEEEECCCCceEEEEEec
Q psy7108         117 MFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD--GSCILAAGQSKYICIYSSREGILLKKFTIT  194 (703)
Q Consensus       117 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd--g~~l~s~s~dg~I~lwD~~~~~~~~~~~~~  194 (703)
                      ||.=...    .++.+..       ..............|+.++|.|.  |-.+++++.||.++||+...--.+...+..
T Consensus        87 iWEE~~~----~~~~~~~-------~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq  155 (361)
T KOG2445|consen   87 IWEEQEK----SEEAHGR-------RWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQ  155 (361)
T ss_pred             eeeeccc----ccccccc-------eeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhh
Confidence            9975211    1111100       00000111112348999999994  778999999999999987654333332211


Q ss_pred             cC-----CccccccccceeeeeccC---CCEEEEEcccCCCCCeeEEECCCCC----CCccceeecCCccceEEEEEcCC
Q psy7108         195 QN-----KSLDGINDFINRRKMTEF---GNVSLIETRETHEGGNVVLKLPGVK----KGDMAARVLKPEVRVFCVKFSPT  262 (703)
Q Consensus       195 ~~-----~~~~~~~~~v~~~~~spd---g~~l~~~~~~~~~~~~~~i~iwd~~----~~~~~~~~~~h~~~V~~l~~spd  262 (703)
                      ..     ..+..+.....|+.|+|.   ...+++++.++ ..-.+.++||...    ....+..+.+|..+|++++|.|+
T Consensus       156 ~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~-a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn  234 (361)
T KOG2445|consen  156 HEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDED-APHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPN  234 (361)
T ss_pred             hhhhhccCCcccccCcceEEeeccccccCceEEEEcccC-CccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccc
Confidence            11     012233456678888865   34677766553 2222467777433    33455667789999999999996


Q ss_pred             C----CEEEEEeCCCEEEEEcCCCc-------e-------------------ecceeeeEEEccchhhhHhhcCCcceEE
Q psy7108         263 G----QAWVAATTEGVHIYSLDSGY-------V-------------------FDPFLLDISITPQSVKEALADKDYAKAL  312 (703)
Q Consensus       263 g----~~l~s~s~Dgv~iwd~~~~~-------~-------------------~~~~~~~~~~spd~~~~~l~sg~~~~~l  312 (703)
                      -    ..||+++.|||+||.+....       .                   +...+..+.|.--|  ..|++.+.|+.+
T Consensus       235 ~Gr~y~~lAvA~kDgv~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtG--tiLsStGdDG~V  312 (361)
T KOG2445|consen  235 IGRSYHLLAVATKDGVRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTG--TILSSTGDDGCV  312 (361)
T ss_pred             cCCceeeEEEeecCcEEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeee--eEEeecCCCcee
Confidence            2    45799999999999987421       0                   11112457777777  789999999999


Q ss_pred             EEEEecCc
Q psy7108         313 MMSLKLNE  320 (703)
Q Consensus       313 ~la~~l~~  320 (703)
                      ++ |+.+-
T Consensus       313 RL-Wkany  319 (361)
T KOG2445|consen  313 RL-WKANY  319 (361)
T ss_pred             ee-hhhhh
Confidence            99 88653

>KOG1273|consensus

Probab=99.78  E-value=5.9e-18  Score=163.36  Aligned_cols=251  Identities=12%  Similarity=0.178  Sum_probs=180.9

Q ss_pred             eEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEE
Q psy7108          50 VSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSV  129 (703)
Q Consensus        50 V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~  129 (703)
                      ..|+.|++  .|.+||+|+.||.|.|||+.+......+..|..+|.+++||+||+.|++++.|..|.+||+..|.++..+
T Consensus        26 a~~~~Fs~--~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~ri  103 (405)
T KOG1273|consen   26 AECCQFSR--WGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRI  103 (405)
T ss_pred             cceEEecc--CcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEE
Confidence            78999999  9999999999999999999998766666779999999999999999999999999999999999887776


Q ss_pred             eccccCCCCCCCCc---------------cchhh--------cc--c-CCccEEEEEEcCCCCEEEEEecCCcEEEEECC
Q psy7108         130 EARRDLDSGRLDTD---------------LVTRE--------QS--L-KAKAVSTVCYSADGSCILAAGQSKYICIYSSR  183 (703)
Q Consensus       130 ~~~~~~~~~~~~~~---------------~~~~~--------~~--~-~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~  183 (703)
                      .-...+.....+..               .....        ..  + ....-.+..|.+.|+++++|...|.+.++|..
T Consensus       104 rf~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~  183 (405)
T KOG1273|consen  104 RFDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAE  183 (405)
T ss_pred             EccCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCCCCEEEEecCcceEEEEecc
Confidence            64332221110000               00000        00  0 01112233588889999999999999999999


Q ss_pred             CCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC-------c--cceeecC--Ccc
Q psy7108         184 EGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG-------D--MAARVLK--PEV  252 (703)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~-------~--~~~~~~~--h~~  252 (703)
                      +.+++..++....       ..|.++.++..|+.+++.+++      +.|+.|+++.-       +  +.+.+..  ...
T Consensus       184 t~e~vas~rits~-------~~IK~I~~s~~g~~liiNtsD------RvIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~  250 (405)
T KOG1273|consen  184 TLECVASFRITSV-------QAIKQIIVSRKGRFLIINTSD------RVIRTYEISDIDDEGRDGEVEPEHKLQDVVNKL  250 (405)
T ss_pred             hheeeeeeeechh-------eeeeEEEEeccCcEEEEecCC------ceEEEEehhhhcccCccCCcChhHHHHHHHhhh
Confidence            9999988875441       378889999999999998876      68999976521       1  1111111  122


Q ss_pred             ceEEEEEcCCCCEEEEEeCCC--EEEEEcCCCceeccee-------eeEEEccchhhhHhhcCCcceEEEEEEecC
Q psy7108         253 RVFCVKFSPTGQAWVAATTEG--VHIYSLDSGYVFDPFL-------LDISITPQSVKEALADKDYAKALMMSLKLN  319 (703)
Q Consensus       253 ~V~~l~~spdg~~l~s~s~Dg--v~iwd~~~~~~~~~~~-------~~~~~spd~~~~~l~sg~~~~~l~la~~l~  319 (703)
                      .-.+++||.||.+++.++...  ++||....|..+..+.       .++.|+|-.  ..+++- ..+.+.+ |...
T Consensus       251 ~Wk~ccfs~dgeYv~a~s~~aHaLYIWE~~~GsLVKILhG~kgE~l~DV~whp~r--p~i~si-~sg~v~i-w~~~  322 (405)
T KOG1273|consen  251 QWKKCCFSGDGEYVCAGSARAHALYIWEKSIGSLVKILHGTKGEELLDVNWHPVR--PIIASI-ASGVVYI-WAVV  322 (405)
T ss_pred             hhhheeecCCccEEEeccccceeEEEEecCCcceeeeecCCchhheeecccccce--eeeeec-cCCceEE-EEee
Confidence            345789999999998888666  9999999998865543       456677644  444443 3445555 5544

>KOG4283|consensus

Probab=99.78  E-value=6e-18  Score=161.85  Aligned_cols=208  Identities=11%  Similarity=0.126  Sum_probs=167.7

Q ss_pred             cccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCce------e---EE------EecCCCcEEEEEEec-CCCE
Q psy7108          42 VLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDT------Q---HE------TIQLLSDALCVAYKP-DGTE  105 (703)
Q Consensus        42 ~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~------~---~~------~~~~~~~V~~v~~sp-dg~~  105 (703)
                      .-..|.+.|+++...+. .|+++++|+.||.+.+||++....      +   ..      ...|+-.|.++.|-| |...
T Consensus        38 ~~r~HgGsvNsL~id~t-egrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGm  116 (397)
T KOG4283|consen   38 FVRPHGGSVNSLQIDLT-EGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGM  116 (397)
T ss_pred             eeccCCCccceeeeccc-cceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCce
Confidence            44679999999999996 899999999999999999975430      0   01      112566799999998 4557


Q ss_pred             EEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC---CCEEEEEecCCcEEEEEC
Q psy7108         106 IVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD---GSCILAAGQSKYICIYSS  182 (703)
Q Consensus       106 las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd---g~~l~s~s~dg~I~lwD~  182 (703)
                      +.+++-|.+++|||.++.+....++-..                     .|.+-+++|-   ..++++|..|-.|++.|+
T Consensus       117 FtssSFDhtlKVWDtnTlQ~a~~F~me~---------------------~VYshamSp~a~sHcLiA~gtr~~~VrLCDi  175 (397)
T KOG4283|consen  117 FTSSSFDHTLKVWDTNTLQEAVDFKMEG---------------------KVYSHAMSPMAMSHCLIAAGTRDVQVRLCDI  175 (397)
T ss_pred             eecccccceEEEeecccceeeEEeecCc---------------------eeehhhcChhhhcceEEEEecCCCcEEEEec
Confidence            8888999999999999999888877643                     6888888883   456778888899999999


Q ss_pred             CCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC-cccee--------------e
Q psy7108         183 REGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG-DMAAR--------------V  247 (703)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~-~~~~~--------------~  247 (703)
                      .+|.+..++.+|..        .|..+.|+|...+++++++.+     ..+++||++.. .+...              -
T Consensus       176 ~SGs~sH~LsGHr~--------~vlaV~Wsp~~e~vLatgsaD-----g~irlWDiRrasgcf~~lD~hn~k~~p~~~~n  242 (397)
T KOG4283|consen  176 ASGSFSHTLSGHRD--------GVLAVEWSPSSEWVLATGSAD-----GAIRLWDIRRASGCFRVLDQHNTKRPPILKTN  242 (397)
T ss_pred             cCCcceeeeccccC--------ceEEEEeccCceeEEEecCCC-----ceEEEEEeecccceeEEeecccCccCcccccc
Confidence            99999888776554        899999999999888777653     48999999864 22211              2


Q ss_pred             cCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCce
Q psy7108         248 LKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYV  284 (703)
Q Consensus       248 ~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~  284 (703)
                      ..|.+.|.+++|+.||.++++++.|. +++|+..+|+.
T Consensus       243 ~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G~n  280 (397)
T KOG4283|consen  243 TAHYGKVNGLAWTSDARYLASCGTDDRIRVWNMESGRN  280 (397)
T ss_pred             ccccceeeeeeecccchhhhhccCccceEEeecccCcc
Confidence            34778899999999999999999888 99999988754

>KOG0268|consensus

Probab=99.78  E-value=1.6e-18  Score=170.22  Aligned_cols=225  Identities=17%  Similarity=0.259  Sum_probs=168.6

Q ss_pred             ccCCceEEecCCceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCC--------------
Q psy7108          16 HEGGNVVLKLPGVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVET--------------   81 (703)
Q Consensus        16 ~~~~~~~i~~~~v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~--------------   81 (703)
                      ..+.++.+++|+..    +..++  +++..|.+.|..+++..    ..++|+++|++|+.|.++..              
T Consensus        84 SGs~DG~VkiWnls----qR~~~--~~f~AH~G~V~Gi~v~~----~~~~tvgdDKtvK~wk~~~~p~~tilg~s~~~gI  153 (433)
T KOG0268|consen   84 SGSCDGEVKIWNLS----QRECI--RTFKAHEGLVRGICVTQ----TSFFTVGDDKTVKQWKIDGPPLHTILGKSVYLGI  153 (433)
T ss_pred             ccccCceEEEEehh----hhhhh--heeecccCceeeEEecc----cceEEecCCcceeeeeccCCcceeeecccccccc
Confidence            34455666666554    56777  89999999999999975    77899999999999984321              


Q ss_pred             ------------ceeEEE------------ecCCCcEEEEEEecCCC-EEEEEECCCeEEEEEcCCCcEEEEEeccccCC
Q psy7108          82 ------------DTQHET------------IQLLSDALCVAYKPDGT-EIVVATLDGQLIMFDVESAAQVGSVEARRDLD  136 (703)
Q Consensus        82 ------------~~~~~~------------~~~~~~V~~v~~spdg~-~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~  136 (703)
                                  ++...+            .-....|.++.|+|... .|++|+.|+.|.+||++++.++..+.-..   
T Consensus       154 dh~~~~~~FaTcGe~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi~~m---  230 (433)
T KOG0268|consen  154 DHHRKNSVFATCGEQIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVILTM---  230 (433)
T ss_pred             ccccccccccccCceeeecccccCCccceeecCCCceeEEecCCCcchheeeeccCCceEEEecccCCccceeeeec---
Confidence                        000111            11223577888888664 67788899999999999998877654432   


Q ss_pred             CCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCC-ceEEEEEeccCCccccccccceeeeeccCC
Q psy7108         137 SGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREG-ILLKKFTITQNKSLDGINDFINRRKMTEFG  215 (703)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~spdg  215 (703)
                                        .-+.|+|+|.+-.+++|+.|..++.||++.- .++..+.        +|.+.|.++.|||.|
T Consensus       231 ------------------RTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~--------dhvsAV~dVdfsptG  284 (433)
T KOG0268|consen  231 ------------------RTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHK--------DHVSAVMDVDFSPTG  284 (433)
T ss_pred             ------------------cccceecCccccceeeccccccceehhhhhhcccchhhc--------ccceeEEEeccCCCc
Confidence                              3578999998888889999999999999864 3333333        455699999999999


Q ss_pred             CEEEEEcccCCCCCeeEEECCCCCCCccceeecC-CccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCcee
Q psy7108         216 NVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK-PEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVF  285 (703)
Q Consensus       216 ~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~-h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~  285 (703)
                      +-+++++.+      ++|+||....+........ --..|.++.||.|.+++++||+|+ |++|.....+.+
T Consensus       285 ~EfvsgsyD------ksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~Asekl  350 (433)
T KOG0268|consen  285 QEFVSGSYD------KSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAKASEKL  350 (433)
T ss_pred             chhcccccc------ceEEEeecCCCcchhhhhHhhhheeeEEEEeccccEEEecCCCcceeeeecchhhhc
Confidence            998887776      5999999887654322221 224599999999999999999999 999997655443

>KOG0303|consensus

Probab=99.77  E-value=4.9e-17  Score=161.47  Aligned_cols=211  Identities=15%  Similarity=0.220  Sum_probs=164.9

Q ss_pred             cccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc-------eeEEEecCCCcEEEEEEecCC-CEEEEEECCC
Q psy7108          42 VLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD-------TQHETIQLLSDALCVAYKPDG-TEIVVATLDG  113 (703)
Q Consensus        42 ~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~-------~~~~~~~~~~~V~~v~~spdg-~~las~s~dg  113 (703)
                      ...||+++|..++|+|. +...|||||.|.+|.||++..+.       .+..+.+|...|--++|+|.. +.|++++.|.
T Consensus        76 ~v~GHt~~vLDi~w~Pf-nD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn  154 (472)
T KOG0303|consen   76 LVCGHTAPVLDIDWCPF-NDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDN  154 (472)
T ss_pred             CccCccccccccccCcc-CCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCc
Confidence            46799999999999997 77899999999999999997654       356677899999999999976 5788999999


Q ss_pred             eEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEe
Q psy7108         114 QLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTI  193 (703)
Q Consensus       114 ~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~  193 (703)
                      +|.+|++.+|+.+-++. |.+                    .|.+++|+.||.+|++++.|+.|++||.++++.+..-..
T Consensus       155 ~v~iWnv~tgeali~l~-hpd--------------------~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~  213 (472)
T KOG0303|consen  155 TVSIWNVGTGEALITLD-HPD--------------------MVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVA  213 (472)
T ss_pred             eEEEEeccCCceeeecC-CCC--------------------eEEEEEeccCCceeeeecccceeEEEcCCCCcEeeeccc
Confidence            99999999999888877 554                    899999999999999999999999999999998877655


Q ss_pred             ccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeec--CCccceEEEEEcCCCCEEE-EEe
Q psy7108         194 TQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL--KPEVRVFCVKFSPTGQAWV-AAT  270 (703)
Q Consensus       194 ~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~--~h~~~V~~l~~spdg~~l~-s~s  270 (703)
                      |.+.       .-..+.|-.+|..+.++.+.   -.++.+-+||..+-+....+.  .....|.---|.||.+.+. +|-
T Consensus       214 heG~-------k~~Raifl~~g~i~tTGfsr---~seRq~aLwdp~nl~eP~~~~elDtSnGvl~PFyD~dt~ivYl~GK  283 (472)
T KOG0303|consen  214 HEGA-------KPARAIFLASGKIFTTGFSR---MSERQIALWDPNNLEEPIALQELDTSNGVLLPFYDPDTSIVYLCGK  283 (472)
T ss_pred             ccCC-------CcceeEEeccCceeeecccc---ccccceeccCcccccCcceeEEeccCCceEEeeecCCCCEEEEEec
Confidence            5542       33557788888843333332   234689999877653322211  1233455556788988885 455


Q ss_pred             CCC-EEEEEcCCCce
Q psy7108         271 TEG-VHIYSLDSGYV  284 (703)
Q Consensus       271 ~Dg-v~iwd~~~~~~  284 (703)
                      .|+ |+-|.+.....
T Consensus       284 GD~~IRYyEit~d~P  298 (472)
T KOG0303|consen  284 GDSSIRYFEITNEPP  298 (472)
T ss_pred             CCcceEEEEecCCCc
Confidence            677 99999877664

>KOG0639|consensus

Probab=99.77  E-value=2.4e-18  Score=174.91  Aligned_cols=246  Identities=13%  Similarity=0.184  Sum_probs=191.9

Q ss_pred             CCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCce---eE--EEecCCCcEEEEEEecCCCEEEEEECCCeEEEEE
Q psy7108          45 GHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDT---QH--ETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFD  119 (703)
Q Consensus        45 gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~---~~--~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd  119 (703)
                      .|.+-|.++.+|.  ..++++||+. |.|+|||+.....   +.  ..+.....+.++...|||+.|++|+.-.++.|||
T Consensus       417 ~HGEvVcAvtIS~--~trhVyTgGk-gcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWD  493 (705)
T KOG0639|consen  417 AHGEVVCAVTISN--PTRHVYTGGK-GCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWD  493 (705)
T ss_pred             ccCcEEEEEEecC--CcceeEecCC-CeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceeeeee
Confidence            5888999999998  8899999987 7899999964431   11  2233556799999999999999999999999999


Q ss_pred             cCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCcc
Q psy7108         120 VESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSL  199 (703)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~  199 (703)
                      +......-..+-..                  ..-...+++.+||.+..++++.||.|.|||+.+...++.|++|.    
T Consensus       494 LAapTprikaelts------------------sapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGht----  551 (705)
T KOG0639|consen  494 LAAPTPRIKAELTS------------------SAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT----  551 (705)
T ss_pred             ccCCCcchhhhcCC------------------cchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCC----
Confidence            97654422111111                  01156789999999999999999999999999999998887655    


Q ss_pred             ccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEE
Q psy7108         200 DGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYS  278 (703)
Q Consensus       200 ~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd  278 (703)
                          +.+.|+.+++||..+.+++-+      ++|+.||++++..++.. .....|.++..+|++.+++.|-+++ +.|-.
T Consensus       552 ----DGascIdis~dGtklWTGGlD------ntvRcWDlregrqlqqh-dF~SQIfSLg~cP~~dWlavGMens~vevlh  620 (705)
T KOG0639|consen  552 ----DGASCIDISKDGTKLWTGGLD------NTVRCWDLREGRQLQQH-DFSSQIFSLGYCPTGDWLAVGMENSNVEVLH  620 (705)
T ss_pred             ----CCceeEEecCCCceeecCCCc------cceeehhhhhhhhhhhh-hhhhhheecccCCCccceeeecccCcEEEEe
Confidence                488999999999999987765      49999999998765432 2456799999999999999999999 87777


Q ss_pred             cCCCce-----ecceeeeEEEccchhhhHhhcCCcceEEEEEEecCchhHHHHHhh
Q psy7108         279 LDSGYV-----FDPFLLDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIHVLE  329 (703)
Q Consensus       279 ~~~~~~-----~~~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~~~~~~v~~  329 (703)
                      ....+.     ++..++++.|++-|  +++++.+.|..+.. |+..-...+.++.|
T Consensus       621 ~skp~kyqlhlheScVLSlKFa~cG--kwfvStGkDnlLna-wrtPyGasiFqskE  673 (705)
T KOG0639|consen  621 TSKPEKYQLHLHESCVLSLKFAYCG--KWFVSTGKDNLLNA-WRTPYGASIFQSKE  673 (705)
T ss_pred             cCCccceeecccccEEEEEEecccC--ceeeecCchhhhhh-ccCccccceeeccc
Confidence            654433     45567889999999  78888887877775 87665555554444

>KOG0641|consensus

Probab=99.77  E-value=4.9e-17  Score=149.92  Aligned_cols=238  Identities=13%  Similarity=0.224  Sum_probs=180.0

Q ss_pred             CCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCC------Cc---------eeEEEecCCCcEEEEEEecCCCEEEEEE
Q psy7108          46 HEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVE------TD---------TQHETIQLLSDALCVAYKPDGTEIVVAT  110 (703)
Q Consensus        46 H~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~------~~---------~~~~~~~~~~~V~~v~~spdg~~las~s  110 (703)
                      .+..|.+++|+|  .|.+.+.||..++.||-....      ..         .......|.+.|.|.+|+|+|++|++|+
T Consensus        31 dsqairav~fhp--~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~geliatgs  108 (350)
T KOG0641|consen   31 DSQAIRAVAFHP--AGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCGELIATGS  108 (350)
T ss_pred             chhheeeEEecC--CCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCccCeEEecC
Confidence            467899999999  999999999999999864321      11         1123345889999999999999999999


Q ss_pred             CCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC----CCEEEEEe-cCCcEEEEECCCC
Q psy7108         111 LDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD----GSCILAAG-QSKYICIYSSREG  185 (703)
Q Consensus       111 ~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd----g~~l~s~s-~dg~I~lwD~~~~  185 (703)
                      .|++|++...+.....  ..+|.             .....|.+.|..++|-.+    |..|++++ .|..|++-|...|
T Consensus       109 ndk~ik~l~fn~dt~~--~~g~d-------------le~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g  173 (350)
T KOG0641|consen  109 NDKTIKVLPFNADTCN--ATGHD-------------LEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRG  173 (350)
T ss_pred             CCceEEEEeccccccc--ccCcc-------------eeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCC
Confidence            9999999877543321  12221             233456779999999653    45666654 5677888899999


Q ss_pred             ceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC--C-----ccceEEEE
Q psy7108         186 ILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK--P-----EVRVFCVK  258 (703)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~--h-----~~~V~~l~  258 (703)
                      +....+.+|.+        .|..+ ++-+|..++.++.+      .+|++||++-..++..+..  |     ...|.+++
T Consensus       174 ~~~~a~sghtg--------hilal-yswn~~m~~sgsqd------ktirfwdlrv~~~v~~l~~~~~~~glessavaav~  238 (350)
T KOG0641|consen  174 QGFHALSGHTG--------HILAL-YSWNGAMFASGSQD------KTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVA  238 (350)
T ss_pred             CcceeecCCcc--------cEEEE-EEecCcEEEccCCC------ceEEEEeeeccceeeeccCcccCCCcccceeEEEE
Confidence            88888776665        44332 33345555554443      5999999998877766553  2     25699999


Q ss_pred             EcCCCCEEEEEeCCC-EEEEEcCCCceecce------eeeEEEccchhhhHhhcCCcceEEEEEEec
Q psy7108         259 FSPTGQAWVAATTEG-VHIYSLDSGYVFDPF------LLDISITPQSVKEALADKDYAKALMMSLKL  318 (703)
Q Consensus       259 ~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~------~~~~~~spd~~~~~l~sg~~~~~l~la~~l  318 (703)
                      ..|.|+.|++|..|. ..+||+..++.++.+      ..++.|+|..  .++.+++||..+++ -++
T Consensus       239 vdpsgrll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a--~yllt~syd~~ikl-tdl  302 (350)
T KOG0641|consen  239 VDPSGRLLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGA--HYLLTCSYDMKIKL-TDL  302 (350)
T ss_pred             ECCCcceeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCc--eEEEEecccceEEE-eec
Confidence            999999999999999 899999999887766      3779999998  89999999999988 444

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.77  E-value=2.3e-16  Score=164.28  Aligned_cols=228  Identities=14%  Similarity=0.144  Sum_probs=162.5

Q ss_pred             ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEE-EeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCE
Q psy7108          28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVS-ASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTE  105 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~s-gs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~  105 (703)
                      +..|| .+++.+  ..+..+.. +..++|+|  +++.+++ ++.|+.+++||+.+..... ...+...+.+++|+|+|+.
T Consensus        55 v~~~d~~~~~~~--~~~~~~~~-~~~~~~~~--~g~~l~~~~~~~~~l~~~d~~~~~~~~-~~~~~~~~~~~~~~~dg~~  128 (300)
T TIGR03866        55 IQVIDLATGEVI--GTLPSGPD-PELFALHP--NGKILYIANEDDNLVTVIDIETRKVLA-EIPVGVEPEGMAVSPDGKI  128 (300)
T ss_pred             EEEEECCCCcEE--EeccCCCC-ccEEEECC--CCCEEEEEcCCCCeEEEEECCCCeEEe-EeeCCCCcceEEECCCCCE
Confidence            55566 356666  55655544 46789999  8887755 4668999999998764433 3344455788999999999


Q ss_pred             EEEEECCC-eEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEE-ecCCcEEEEECC
Q psy7108         106 IVVATLDG-QLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAA-GQSKYICIYSSR  183 (703)
Q Consensus       106 las~s~dg-~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~-s~dg~I~lwD~~  183 (703)
                      +++++.++ .+.+||.++++.........                     ....++|+|+++.++++ ..++.|.+||++
T Consensus       129 l~~~~~~~~~~~~~d~~~~~~~~~~~~~~---------------------~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~  187 (300)
T TIGR03866       129 VVNTSETTNMAHFIDTKTYEIVDNVLVDQ---------------------RPRFAEFTADGKELWVSSEIGGTVSVIDVA  187 (300)
T ss_pred             EEEEecCCCeEEEEeCCCCeEEEEEEcCC---------------------CccEEEECCCCCEEEEEcCCCCEEEEEEcC
Confidence            99988765 56788998887665443221                     34678999999988655 468999999999


Q ss_pred             CCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCC
Q psy7108         184 EGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTG  263 (703)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg  263 (703)
                      +++.+..+..+....... ......++++|+++.++++...+     ..+.+||.++++...... +...+.+++|+|+|
T Consensus       188 ~~~~~~~~~~~~~~~~~~-~~~~~~i~~s~dg~~~~~~~~~~-----~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~g  260 (300)
T TIGR03866       188 TRKVIKKITFEIPGVHPE-AVQPVGIKLTKDGKTAFVALGPA-----NRVAVVDAKTYEVLDYLL-VGQRVWQLAFTPDE  260 (300)
T ss_pred             cceeeeeeeecccccccc-cCCccceEECCCCCEEEEEcCCC-----CeEEEEECCCCcEEEEEE-eCCCcceEEECCCC
Confidence            998877665332110000 11234688999999876654322     369999998887665442 34578899999999


Q ss_pred             CEEEEEe-CCC-EEEEEcCCCceeccee
Q psy7108         264 QAWVAAT-TEG-VHIYSLDSGYVFDPFL  289 (703)
Q Consensus       264 ~~l~s~s-~Dg-v~iwd~~~~~~~~~~~  289 (703)
                      ++|++++ .++ |++||+.+++....+.
T Consensus       261 ~~l~~~~~~~~~i~v~d~~~~~~~~~~~  288 (300)
T TIGR03866       261 KYLLTTNGVSNDVSVIDVAALKVIKSIK  288 (300)
T ss_pred             CEEEEEcCCCCeEEEEECCCCcEEEEEE
Confidence            9998764 577 9999999988766654

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG0301|consensus

Probab=99.77  E-value=1.6e-17  Score=175.69  Aligned_cols=244  Identities=13%  Similarity=0.200  Sum_probs=195.5

Q ss_pred             ceeeccCCC-ccccccccCCCcCeEE-EEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCE
Q psy7108          28 VKKGDMAAR-VLKPEVLSGHEGPVSC-IEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTE  105 (703)
Q Consensus        28 v~~~d~tg~-~~~~~~l~gH~~~V~~-l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~  105 (703)
                      +++|+..++ .+....+.+|.+-|.+ +++.+. ++..+++|+.|+++.+|..........+.+|+..|.|+.-..++. 
T Consensus        37 ~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~-~~~~l~~g~~D~~i~v~~~~~~~P~~~LkgH~snVC~ls~~~~~~-  114 (745)
T KOG0301|consen   37 VKVWAKKGKQYLETHAFEGPKGFIANSICYAES-DKGRLVVGGMDTTIIVFKLSQAEPLYTLKGHKSNVCSLSIGEDGT-  114 (745)
T ss_pred             eeeeeccCcccccceecccCcceeeccceeccc-cCcceEeecccceEEEEecCCCCchhhhhccccceeeeecCCcCc-
Confidence            455664343 3322567889888888 888863 677899999999999999988888888899999999999888877 


Q ss_pred             EEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCC
Q psy7108         106 IVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREG  185 (703)
Q Consensus       106 las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~  185 (703)
                      +++||.|.++++|..  ++....+.+|..                    .|++++.-|++ .+++||.|++|++|.-  +
T Consensus       115 ~iSgSWD~TakvW~~--~~l~~~l~gH~a--------------------sVWAv~~l~e~-~~vTgsaDKtIklWk~--~  169 (745)
T KOG0301|consen  115 LISGSWDSTAKVWRI--GELVYSLQGHTA--------------------SVWAVASLPEN-TYVTGSADKTIKLWKG--G  169 (745)
T ss_pred             eEecccccceEEecc--hhhhcccCCcch--------------------heeeeeecCCC-cEEeccCcceeeeccC--C
Confidence            999999999999965  455556777765                    89999999988 7899999999999985  6


Q ss_pred             ceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCE
Q psy7108         186 ILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQA  265 (703)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~  265 (703)
                      +++++|.+        |.+.|+.+++-+++.++-. +.+      ..|++|++ +|+++.+..+|..-|.+++..+++..
T Consensus       170 ~~l~tf~g--------HtD~VRgL~vl~~~~flSc-sND------g~Ir~w~~-~ge~l~~~~ghtn~vYsis~~~~~~~  233 (745)
T KOG0301|consen  170 TLLKTFSG--------HTDCVRGLAVLDDSHFLSC-SND------GSIRLWDL-DGEVLLEMHGHTNFVYSISMALSDGL  233 (745)
T ss_pred             chhhhhcc--------chhheeeeEEecCCCeEee-cCC------ceEEEEec-cCceeeeeeccceEEEEEEecCCCCe
Confidence            67777764        5569999999999875433 333      38999998 78899999999999999998888899


Q ss_pred             EEEEeCCC-EEEEEcCCCceeccee------eeEEEccchhhhHhhcCCcceEEEEEEecCc
Q psy7108         266 WVAATTEG-VHIYSLDSGYVFDPFL------LDISITPQSVKEALADKDYAKALMMSLKLNE  320 (703)
Q Consensus       266 l~s~s~Dg-v~iwd~~~~~~~~~~~------~~~~~spd~~~~~l~sg~~~~~l~la~~l~~  320 (703)
                      ++++++|+ ++||+..  ++.+...      +++.+-++|   -+..|+.|+.+++ |...+
T Consensus       234 Ivs~gEDrtlriW~~~--e~~q~I~lPttsiWsa~~L~Ng---DIvvg~SDG~VrV-fT~~k  289 (745)
T KOG0301|consen  234 IVSTGEDRTLRIWKKD--ECVQVITLPTTSIWSAKVLLNG---DIVVGGSDGRVRV-FTVDK  289 (745)
T ss_pred             EEEecCCceEEEeecC--ceEEEEecCccceEEEEEeeCC---CEEEeccCceEEE-EEecc
Confidence            99999999 9999987  3333332      445555555   3567888999998 77654

>KOG1036|consensus

Probab=99.77  E-value=4.8e-17  Score=157.27  Aligned_cols=239  Identities=18%  Similarity=0.308  Sum_probs=183.9

Q ss_pred             CCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcE
Q psy7108          46 HEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQ  125 (703)
Q Consensus        46 H~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~  125 (703)
                      -.+.|+++.|+|  .++.|+.+++||++++|++... .....+.|..++.+++|.+ ...+++|+.||.|+.+|+.+++.
T Consensus        12 P~d~IS~v~f~~--~~~~LLvssWDgslrlYdv~~~-~l~~~~~~~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln~~~~   87 (323)
T KOG1036|consen   12 PEDGISSVKFSP--SSSDLLVSSWDGSLRLYDVPAN-SLKLKFKHGAPLLDCAFAD-ESTIVTGGLDGQVRRYDLNTGNE   87 (323)
T ss_pred             ChhceeeEEEcC--cCCcEEEEeccCcEEEEeccch-hhhhheecCCceeeeeccC-CceEEEeccCceEEEEEecCCcc
Confidence            367899999999  8888888889999999999776 5667778999999999997 56789999999999999998875


Q ss_pred             EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCcccccccc
Q psy7108         126 VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDF  205 (703)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~  205 (703)
                      ... ..|                    ..++.|+.+++-...+++|+.|++|++||.+.......+...         ..
T Consensus        88 ~~i-gth--------------------~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~~---------kk  137 (323)
T KOG1036|consen   88 DQI-GTH--------------------DEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFDQG---------KK  137 (323)
T ss_pred             eee-ccC--------------------CCceEEEEeeccCCeEEEcccCccEEEEeccccccccccccC---------ce
Confidence            433 233                    348999999998889999999999999999975444433311         13


Q ss_pred             ceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceee--cCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCC
Q psy7108         206 INRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARV--LKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSG  282 (703)
Q Consensus       206 v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~--~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~  282 (703)
                      |.++  +-.|..+++++.+      +.+.+||+++.....+.  ...+..+.++++-|++.-.++++-|| |.+=.++..
T Consensus       138 Vy~~--~v~g~~LvVg~~~------r~v~iyDLRn~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s  209 (323)
T KOG1036|consen  138 VYCM--DVSGNRLVVGTSD------RKVLIYDLRNLDEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDS  209 (323)
T ss_pred             EEEE--eccCCEEEEeecC------ceEEEEEcccccchhhhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCc
Confidence            4443  4456778887765      48999999987544322  23466799999999998899999999 665544443


Q ss_pred             ce----------ecc---------eeeeEEEccchhhhHhhcCCcceEEEEEEecCchhHHHHHhh
Q psy7108         283 YV----------FDP---------FLLDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIHVLE  329 (703)
Q Consensus       283 ~~----------~~~---------~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~~~~~~v~~  329 (703)
                      +.          +..         .+.+++|+|--  ..+++|+.|+.+.. |++...+.+.++-+
T Consensus       210 ~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~--~tfaTgGsDG~V~~-Wd~~~rKrl~q~~~  272 (323)
T KOG1036|consen  210 EEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIH--GTFATGGSDGIVNI-WDLFNRKRLKQLAK  272 (323)
T ss_pred             hHHhhhceeEEeeecccCCceEEEEeceeEecccc--ceEEecCCCceEEE-ccCcchhhhhhccC
Confidence            11          111         12468999975  78999999999998 99998877777644

>KOG0321|consensus

Probab=99.77  E-value=1.7e-17  Score=173.78  Aligned_cols=270  Identities=11%  Similarity=0.121  Sum_probs=182.7

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEE--EecCCCcEEEEEEecCCC-EEEEEECCCeEEE
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHE--TIQLLSDALCVAYKPDGT-EIVVATLDGQLIM  117 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~--~~~~~~~V~~v~~spdg~-~las~s~dg~I~v  117 (703)
                      .-...|...|..+.|.|  ....|++++.|.++++||+.+......  .++|.+.|.++||.|++. .+++|+.||.|.|
T Consensus        94 k~~~aH~nAifDl~wap--ge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~ill  171 (720)
T KOG0321|consen   94 KKPLAHKNAIFDLKWAP--GESLLVSASGDSTIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILL  171 (720)
T ss_pred             cccccccceeEeeccCC--CceeEEEccCCceeeeeeeccceeecceeecccccccchhhhccCCCcceeeccCCCcEEE
Confidence            34568999999999999  889999999999999999998876655  788999999999999775 7789999999999


Q ss_pred             EEcCCCcEE-------EEEeccccCCCCCCCCccchhhcccCCccEEE---EEEcCCCCEEEEEec-CCcEEEEECCCCc
Q psy7108         118 FDVESAAQV-------GSVEARRDLDSGRLDTDLVTREQSLKAKAVST---VCYSADGSCILAAGQ-SKYICIYSSREGI  186 (703)
Q Consensus       118 wd~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~---i~~spdg~~l~s~s~-dg~I~lwD~~~~~  186 (703)
                      ||++....-       .....|..................++...|..   +.+..|...|++++. |+.|++||++...
T Consensus       172 WD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~  251 (720)
T KOG0321|consen  172 WDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNY  251 (720)
T ss_pred             EEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccc
Confidence            999755411       11111211000000000011112233444444   555678888998877 9999999999865


Q ss_pred             eEEEEEeccCCccccc---cccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCc--cceeecCCccc--eEEEEE
Q psy7108         187 LLKKFTITQNKSLDGI---NDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGD--MAARVLKPEVR--VFCVKF  259 (703)
Q Consensus       187 ~~~~~~~~~~~~~~~~---~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~--~~~~~~~h~~~--V~~l~~  259 (703)
                      ............+..+   .-.+.++.....|.++++.+.++      .|++|++.+-.  ++..+.++...  -..-..
T Consensus       252 ~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~------sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~l  325 (720)
T KOG0321|consen  252 TAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDN------SIYFYNMRSLSISPVAEFSGKLNSSFYVKSEL  325 (720)
T ss_pred             cccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCC------cEEEEeccccCcCchhhccCcccceeeeeeec
Confidence            5433322111111111   22466777788889999999864      89999987643  33333333211  112246


Q ss_pred             cCCCCEEEEEeCCC-EEEEEcCCCce-------ecceeeeEEEccchhhhHhhcCCcceEEEEEEecCc
Q psy7108         260 SPTGQAWVAATTEG-VHIYSLDSGYV-------FDPFLLDISITPQSVKEALADKDYAKALMMSLKLNE  320 (703)
Q Consensus       260 spdg~~l~s~s~Dg-v~iwd~~~~~~-------~~~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~  320 (703)
                      +||+.++++|+.|. ..+|.+.+-+.       +...+..++|.|...... ++++.|-.+++ |++..
T Consensus       326 Spd~~~l~SgSsd~~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~pS~~t~v-~TcSdD~~~ki-W~l~~  392 (720)
T KOG0321|consen  326 SPDDCSLLSGSSDEQAYIWVVSSPEAPPALLLGHTREVTTVRWLPSATTPV-ATCSDDFRVKI-WRLSN  392 (720)
T ss_pred             CCCCceEeccCCCcceeeeeecCccCChhhhhCcceEEEEEeeccccCCCc-eeeccCcceEE-EeccC
Confidence            89999999999999 99999987654       223346788888765444 45588888888 99854

>KOG1408|consensus

Probab=99.76  E-value=2.7e-17  Score=173.58  Aligned_cols=270  Identities=13%  Similarity=0.167  Sum_probs=201.2

Q ss_pred             eEEecCCceeeccCCCccccccccCCCcCeEEEEEcCC--C-------CCCEEEEEeCCCcEEEEEcCCCc--ee-E---
Q psy7108          21 VVLKLPGVKKGDMAARVLKPEVLSGHEGPVSCIEFSPV--L-------SSTGMVSASWDKTVKLWNAVETD--TQ-H---   85 (703)
Q Consensus        21 ~~i~~~~v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~--~-------dg~~L~sgs~Dg~V~iWd~~~~~--~~-~---   85 (703)
                      -.+.+|+++.-.+-|++-   .+--|...|+++.--|.  +       -...++|||.|++||+|+++.+.  .+ .   
T Consensus       346 hSlYvWDvrD~~kvgk~~---s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRlW~l~~ctnn~vyrRNi  422 (1080)
T KOG1408|consen  346 HSLYVWDVRDVNKVGKCS---SMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIRLWDLAFCTNNQVYRRNI  422 (1080)
T ss_pred             ceEEEEecccccccccee---eeeeccceeeeeccccccccCcccccCCccceeEecCCCcEEEeecccccccceeeccc
Confidence            345667777666667664   44458888888877661  0       12358999999999999997521  11 0   


Q ss_pred             -------------------------------EEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEecccc
Q psy7108          86 -------------------------------ETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRD  134 (703)
Q Consensus        86 -------------------------------~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~  134 (703)
                                                     ........+.+++.+|+|++||+|..-|+++|||+.+.+....++.|..
T Consensus       423 ls~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~~~~eAHes  502 (1080)
T KOG1408|consen  423 LSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQHLASGDRGGNLRVYDLQELEYTCFMEAHES  502 (1080)
T ss_pred             chhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCcceecccCccCceEEEEehhhhhhhheecccc
Confidence                                           0011233689999999999999999999999999999988888888876


Q ss_pred             CCCCCCCCccchhhcccCCccEEEEEEcC---CCCEEEEEecCCcEEEEECCCC-ceEEEEEeccC--------------
Q psy7108         135 LDSGRLDTDLVTREQSLKAKAVSTVCYSA---DGSCILAAGQSKYICIYSSREG-ILLKKFTITQN--------------  196 (703)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~V~~i~~sp---dg~~l~s~s~dg~I~lwD~~~~-~~~~~~~~~~~--------------  196 (703)
                                          .|.|+.|+.   ..++|++++.|.-|.+||+... .++.++..|..              
T Consensus       503 --------------------EilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l~qtld~HSssITsvKFa~~gln~  562 (1080)
T KOG1408|consen  503 --------------------EILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYDLVQTLDGHSSSITSVKFACNGLNR  562 (1080)
T ss_pred             --------------------eeEEEeecCchhhhHhhhhccCCceEEEEecccccchhhhhcccccceeEEEEeecCCce
Confidence                                899999985   3578999999999999998642 22222221111              


Q ss_pred             ----------------------Cc-cc----cccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC
Q psy7108         197 ----------------------KS-LD----GINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK  249 (703)
Q Consensus       197 ----------------------~~-~~----~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~  249 (703)
                                            .. ..    .....+..+++.|..+++++++.+      +.|+|||+.+|+....+.+
T Consensus       563 ~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQD------rnirif~i~sgKq~k~FKg  636 (1080)
T KOG1408|consen  563 KMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQD------RNIRIFDIESGKQVKSFKG  636 (1080)
T ss_pred             EEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEecc------cceEEEeccccceeeeecc
Confidence                                  00 00    011245566677777777776665      5899999999998888875


Q ss_pred             ---CccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCcee------cceeeeEEEccchhhhHhhcCCcceEEEEEEecC
Q psy7108         250 ---PEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVF------DPFLLDISITPQSVKEALADKDYAKALMMSLKLN  319 (703)
Q Consensus       250 ---h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~------~~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~  319 (703)
                         |++....+...|.|.++|+.+.|. +.++|.-+|++.      ...+..+.|++|-  +.|.+.+.|+.|.+ |++.
T Consensus       637 s~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~GHsE~VTG~kF~nDC--kHlISvsgDgCIFv-W~lp  713 (1080)
T KOG1408|consen  637 SRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQMTGHSEAVTGVKFLNDC--KHLISVSGDGCIFV-WKLP  713 (1080)
T ss_pred             cccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhhcCcchheeeeeecccc--hhheeecCCceEEE-EECc
Confidence               678888999999999999999999 999999999884      4456789999999  77888888899888 9987


Q ss_pred             chh
Q psy7108         320 EQG  322 (703)
Q Consensus       320 ~~~  322 (703)
                      ...
T Consensus       714 ~~m  716 (1080)
T KOG1408|consen  714 LTM  716 (1080)
T ss_pred             hhH
Confidence            643

>KOG1274|consensus

Probab=99.76  E-value=4.8e-17  Score=177.11  Aligned_cols=236  Identities=10%  Similarity=0.158  Sum_probs=193.1

Q ss_pred             cCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCC-ceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCC
Q psy7108          44 SGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVET-DTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVES  122 (703)
Q Consensus        44 ~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~-~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~  122 (703)
                      .+|+..-+.++|.|  +|.+|++|+.||.|++|+.... +....+..+...|.+++..  +.+|++|+.+++|.+|...+
T Consensus        10 yaht~G~t~i~~d~--~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~--s~~f~~~s~~~tv~~y~fps   85 (933)
T KOG1274|consen   10 YAHTGGLTLICYDP--DGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIACY--SNHFLTGSEQNTVLRYKFPS   85 (933)
T ss_pred             hhccCceEEEEEcC--CCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEeec--ccceEEeeccceEEEeeCCC
Confidence            47899999999999  9999999999999999997665 3333333377778887765  55899999999999999988


Q ss_pred             CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccc
Q psy7108         123 AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGI  202 (703)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~  202 (703)
                      ++.-..+..-..                    ++.+++++-+|++++.||.|-.|++.++.+....+.+.++.       
T Consensus        86 ~~~~~iL~Rftl--------------------p~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~-------  138 (933)
T KOG1274|consen   86 GEEDTILARFTL--------------------PIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHD-------  138 (933)
T ss_pred             CCccceeeeeec--------------------cceEEEEecCCcEEEeecCceeEEEEeccccchheeecccC-------
Confidence            876444433322                    78999999999999999999999999999888777776554       


Q ss_pred             cccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCC--------ccceEEEEEcCCCCEEEEEeCCC-
Q psy7108         203 NDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKP--------EVRVFCVKFSPTGQAWVAATTEG-  273 (703)
Q Consensus       203 ~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h--------~~~V~~l~~spdg~~l~s~s~Dg-  273 (703)
                       .+|.++.++|.+.++++++.+|      .|++||+.++.+...+.+-        ...+..++|+|+|..|+..+.|+ 
T Consensus       139 -apVl~l~~~p~~~fLAvss~dG------~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~  211 (933)
T KOG1274|consen  139 -APVLQLSYDPKGNFLAVSSCDG------KVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNT  211 (933)
T ss_pred             -CceeeeeEcCCCCEEEEEecCc------eEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCe
Confidence             4999999999999999999875      8999999998766554431        33467789999988888888888 


Q ss_pred             EEEEEcCCCceecce--------eeeEEEccchhhhHhhcCCcceEEEEEEecCc
Q psy7108         274 VHIYSLDSGYVFDPF--------LLDISITPQSVKEALADKDYAKALMMSLKLNE  320 (703)
Q Consensus       274 v~iwd~~~~~~~~~~--------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~  320 (703)
                      |++|+..+....-.+        ...+.|+|.|  .++|++..++.|.+ |+...
T Consensus       212 Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG--~YiAAs~~~g~I~v-Wnv~t  263 (933)
T KOG1274|consen  212 VKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNG--KYIAASTLDGQILV-WNVDT  263 (933)
T ss_pred             EEEEccCCceeheeecccccccceEEEEEcCCC--cEEeeeccCCcEEE-Eeccc
Confidence            999999887663332        2568999999  99999999999998 98874

>KOG2055|consensus

Probab=99.76  E-value=5.4e-17  Score=164.23  Aligned_cols=232  Identities=16%  Similarity=0.211  Sum_probs=184.3

Q ss_pred             CcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCce--eEEEecCCCcEEEEEEecCCC-EEEEEECCCeEEEEEcCCC
Q psy7108          47 EGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDT--QHETIQLLSDALCVAYKPDGT-EIVVATLDGQLIMFDVESA  123 (703)
Q Consensus        47 ~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~--~~~~~~~~~~V~~v~~spdg~-~las~s~dg~I~vwd~~~~  123 (703)
                      .++|+++.|+|  ....|++|+.||+++||.++....  +....-...+|.+.+|.|+|+ .+++++...-.+.||+.++
T Consensus       213 ~~~I~sv~FHp--~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~a  290 (514)
T KOG2055|consen  213 HGGITSVQFHP--TAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETA  290 (514)
T ss_pred             cCCceEEEecC--CCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeecccc
Confidence            47899999999  999999999999999999865432  333333567899999999998 8899999999999999887


Q ss_pred             cEEEE--EeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCcccc
Q psy7108         124 AQVGS--VEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDG  201 (703)
Q Consensus       124 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~  201 (703)
                      +....  ..++.                   ...+.....+|++++|+..+..|.|.+....+++.+.+++.        
T Consensus       291 k~~k~~~~~g~e-------------------~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~Ki--------  343 (514)
T KOG2055|consen  291 KVTKLKPPYGVE-------------------EKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFKI--------  343 (514)
T ss_pred             ccccccCCCCcc-------------------cchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheeee--------
Confidence            65432  22221                   22577788899999999999999999999999999888873        


Q ss_pred             ccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCc-cceEEEEEcCCCCEEEEEeCCC-EEEEEc
Q psy7108         202 INDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPE-VRVFCVKFSPTGQAWVAATTEG-VHIYSL  279 (703)
Q Consensus       202 ~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~-~~V~~l~~spdg~~l~s~s~Dg-v~iwd~  279 (703)
                       +..|..++|+.||+.+++++..|      .|.+||+++..++.++.... -.-++++.|++|++||+|+..| |.|||.
T Consensus       344 -eG~v~~~~fsSdsk~l~~~~~~G------eV~v~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~  416 (514)
T KOG2055|consen  344 -EGVVSDFTFSSDSKELLASGGTG------EVYVWNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDG  416 (514)
T ss_pred             -ccEEeeEEEecCCcEEEEEcCCc------eEEEEecCCcceEEEEeecCccceeeeeecCCCceEEeccCcceEEEecc
Confidence             34788999999999999888765      79999999998777765422 2245678889999999999999 899997


Q ss_pred             CCCce------------ecceeeeEEEccchhhhHhhcCCcceEEEE
Q psy7108         280 DSGYV------------FDPFLLDISITPQSVKEALADKDYAKALMM  314 (703)
Q Consensus       280 ~~~~~------------~~~~~~~~~~spd~~~~~l~sg~~~~~l~l  314 (703)
                      ++...            +..-+.++.|++|....++++.....++++
T Consensus       417 ~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~~~knalrL  463 (514)
T KOG2055|consen  417 NSCFASTNPKPIKTVDNLTTAITSLQFNHDAQILAIASRVKKNALRL  463 (514)
T ss_pred             chhhccCCCCchhhhhhhheeeeeeeeCcchhhhhhhhhccccceEE
Confidence            65322            112236799999996666777777788887

>KOG2055|consensus

Probab=99.76  E-value=2.7e-17  Score=166.34  Aligned_cols=241  Identities=15%  Similarity=0.198  Sum_probs=196.7

Q ss_pred             ccccCCCcCeEEEEEcCCCCCC-EEEEEeCCCcEEEEEcCCCcee--EEEecCC-CcEEEEEEecCCCEEEEEECCCeEE
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSST-GMVSASWDKTVKLWNAVETDTQ--HETIQLL-SDALCVAYKPDGTEIVVATLDGQLI  116 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~-~L~sgs~Dg~V~iWd~~~~~~~--~~~~~~~-~~V~~v~~spdg~~las~s~dg~I~  116 (703)
                      +.+.--..+|.+.+|.|  +|. .+++++.-..+..||+.+.+..  ....++. ..+.....+|++++|+..+..|.|.
T Consensus       251 qS~~l~~fPi~~a~f~p--~G~~~i~~s~rrky~ysyDle~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~  328 (514)
T KOG2055|consen  251 QSIHLEKFPIQKAEFAP--NGHSVIFTSGRRKYLYSYDLETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIH  328 (514)
T ss_pred             eeeeeccCccceeeecC--CCceEEEecccceEEEEeeccccccccccCCCCcccchhheeEecCCCCeEEEcccCceEE
Confidence            33444478999999999  888 8899999999999999877422  2222333 3567789999999999999999999


Q ss_pred             EEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccC
Q psy7108         117 MFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQN  196 (703)
Q Consensus       117 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~  196 (703)
                      +....+++.+.+++-..                     .|..++|+.|++.|++++.+|.|.+||++...+++++....+
T Consensus       329 lLhakT~eli~s~KieG---------------------~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~~~rf~D~G~  387 (514)
T KOG2055|consen  329 LLHAKTKELITSFKIEG---------------------VVSDFTFSSDSKELLASGGTGEVYVWNLRQNSCLHRFVDDGS  387 (514)
T ss_pred             eehhhhhhhhheeeecc---------------------EEeeEEEecCCcEEEEEcCCceEEEEecCCcceEEEEeecCc
Confidence            99999999988887643                     699999999999999999999999999999999999875443


Q ss_pred             CccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC------ccceeecCCccceEEEEEcCCCCEEEEEe
Q psy7108         197 KSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG------DMAARVLKPEVRVFCVKFSPTGQAWVAAT  270 (703)
Q Consensus       197 ~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~------~~~~~~~~h~~~V~~l~~spdg~~l~s~s  270 (703)
                      .       .-++++.|++|.++++++..|      .|.|||..+.      +++..+..-...|++++|+||++.||.+|
T Consensus       388 v-------~gts~~~S~ng~ylA~GS~~G------iVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS  454 (514)
T KOG2055|consen  388 V-------HGTSLCISLNGSYLATGSDSG------IVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQILAIAS  454 (514)
T ss_pred             c-------ceeeeeecCCCceEEeccCcc------eEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcchhhhhhhh
Confidence            1       346788999999999888765      8999986542      45555666677899999999999998887


Q ss_pred             CCC---EEEEEcCCCceecce---------eeeEEEccchhhhHhhcCCcceEEEEEEecCc
Q psy7108         271 TEG---VHIYSLDSGYVFDPF---------LLDISITPQSVKEALADKDYAKALMMSLKLNE  320 (703)
Q Consensus       271 ~Dg---v~iwd~~~~~~~~~~---------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~  320 (703)
                      ...   +++-.+.+...+..+         +.+++|||.+  -+++-|+..+.+.+ |++..
T Consensus       455 ~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~s--G~lAvGNe~grv~l-~kL~h  513 (514)
T KOG2055|consen  455 RVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSPNS--GYLAVGNEAGRVHL-FKLHH  513 (514)
T ss_pred             hccccceEEEeccceeeeccCCCCCCcccceEEEEecCCC--ceEEeecCCCceee-Eeecc
Confidence            644   999999888776655         3789999988  78999999999998 88753

>KOG0302|consensus

Probab=99.76  E-value=2.9e-17  Score=162.25  Aligned_cols=209  Identities=14%  Similarity=0.250  Sum_probs=159.2

Q ss_pred             CCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCce---eEEEecCCCcEEEEEEecCC-CEEEEEE
Q psy7108          35 ARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDT---QHETIQLLSDALCVAYKPDG-TEIVVAT  110 (703)
Q Consensus        35 g~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~---~~~~~~~~~~V~~v~~spdg-~~las~s  110 (703)
                      .+++  .++.+|.+.=++++|||. ....|+||..-+.|++|...++.-   ...+..|...|-.++|||.. ..|++|+
T Consensus       201 ~~Pl--~t~~ghk~EGy~LdWSp~-~~g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS  277 (440)
T KOG0302|consen  201 FRPL--FTFNGHKGEGYGLDWSPI-KTGRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCS  277 (440)
T ss_pred             cCce--EEecccCccceeeecccc-cccccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeee
Confidence            3555  788899999999999995 344688888888999999887652   23445699999999999976 5889999


Q ss_pred             CCCeEEEEEcCCCcEEEE--EeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCC---C
Q psy7108         111 LDGQLIMFDVESAAQVGS--VEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSRE---G  185 (703)
Q Consensus       111 ~dg~I~vwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~---~  185 (703)
                      .||+|+|||++.+.....  .+.|                    ..-|+.|.|+.+..+|++|+.||+++|||+++   +
T Consensus       278 ~DgsIrIWDiRs~~~~~~~~~kAh--------------------~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~  337 (440)
T KOG0302|consen  278 CDGSIRIWDIRSGPKKAAVSTKAH--------------------NSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSG  337 (440)
T ss_pred             cCceEEEEEecCCCccceeEeecc--------------------CCceeeEEccCCcceeeecCCCceEEEEEhhhccCC
Confidence            999999999998843221  1333                    44899999999888999999999999999986   4


Q ss_pred             ceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcc----------------ceeecC
Q psy7108         186 ILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDM----------------AARVLK  249 (703)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~----------------~~~~~~  249 (703)
                      +++.+|+.|..        +|+++.|+|.....+.+++.+     ..|.+||+..-.-                .+.+.-
T Consensus       338 ~pVA~fk~Hk~--------pItsieW~p~e~s~iaasg~D-----~QitiWDlsvE~D~ee~~~~a~~~L~dlPpQLLFV  404 (440)
T KOG0302|consen  338 QPVATFKYHKA--------PITSIEWHPHEDSVIAASGED-----NQITIWDLSVEADEEEIDQEAAEGLQDLPPQLLFV  404 (440)
T ss_pred             CcceeEEeccC--------CeeEEEeccccCceEEeccCC-----CcEEEEEeeccCChhhhccccccchhcCCceeEEE
Confidence            56777776554        999999999877666555443     4899999764211                112223


Q ss_pred             C--ccceEEEEEcCCC-CEEEEEeCCCEEEEEc
Q psy7108         250 P--EVRVFCVKFSPTG-QAWVAATTEGVHIYSL  279 (703)
Q Consensus       250 h--~~~V~~l~~spdg-~~l~s~s~Dgv~iwd~  279 (703)
                      |  +..+..+.|++.- .++++.+.||+.||..
T Consensus       405 HqGQke~KevhWH~QiPG~lvsTa~dGfnVfkt  437 (440)
T KOG0302|consen  405 HQGQKEVKEVHWHRQIPGLLVSTAIDGFNVFKT  437 (440)
T ss_pred             ecchhHhhhheeccCCCCeEEEecccceeEEEe
Confidence            4  3457889999864 4678888899888763

>KOG0269|consensus

Probab=99.75  E-value=7.9e-18  Score=179.85  Aligned_cols=244  Identities=11%  Similarity=0.159  Sum_probs=179.5

Q ss_pred             CcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCce----eEEEec---CCCcEEEEEEec-CCCEEEEEECCCeEEEE
Q psy7108          47 EGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDT----QHETIQ---LLSDALCVAYKP-DGTEIVVATLDGQLIMF  118 (703)
Q Consensus        47 ~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~----~~~~~~---~~~~V~~v~~sp-dg~~las~s~dg~I~vw  118 (703)
                      ....++++.++  +-..++.++. ..++|+.+.....    ......   ..-.+..|.|.. +.++||+++..|.|.+|
T Consensus        39 k~~~nAIs~nr--~~~qiv~AGr-s~lklyai~~~~~~~~~~~~~k~kqn~~~S~~DVkW~~~~~NlIAT~s~nG~i~vW  115 (839)
T KOG0269|consen   39 KAKANAISVNR--DINQIVVAGR-SLLKLYAINPNDFSEKCNHRFKTKQNKFYSAADVKWGQLYSNLIATCSTNGVISVW  115 (839)
T ss_pred             ccccceEeecC--CcceeEEecc-cceeeEeeCcccCCcceeeecccccceeeehhhcccccchhhhheeecCCCcEEEE
Confidence            34566778888  8888888876 3678887754321    111111   112345678874 45789999999999999


Q ss_pred             EcCC---CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC-CCEEEEEecCCcEEEEECCCCceEEEEEec
Q psy7108         119 DVES---AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD-GSCILAAGQSKYICIYSSREGILLKKFTIT  194 (703)
Q Consensus       119 d~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd-g~~l~s~s~dg~I~lwD~~~~~~~~~~~~~  194 (703)
                      |+..   .+.+..+..|..                    .+++++|++. ..+|++|+.||+|++||++..+...++...
T Consensus       116 dlnk~~rnk~l~~f~EH~R--------------------s~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~n  175 (839)
T KOG0269|consen  116 DLNKSIRNKLLTVFNEHER--------------------SANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSN  175 (839)
T ss_pred             ecCccccchhhhHhhhhcc--------------------ceeeeeeccCCccEEEecCCCceEEEEeeeccccccccccc
Confidence            9976   344455666554                    8999999985 577889999999999999998887777653


Q ss_pred             cCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC-ccceeecCCccceEEEEEcCCCCEEEEEeCCC
Q psy7108         195 QNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG-DMAARVLKPEVRVFCVKFSPTGQAWVAATTEG  273 (703)
Q Consensus       195 ~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~-~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg  273 (703)
                      .        +.|..++|+|.....+++..++     +.+++||++.. ++...+..|.++|.++.|+|++.+|||||.|+
T Consensus       176 S--------ESiRDV~fsp~~~~~F~s~~ds-----G~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK  242 (839)
T KOG0269|consen  176 S--------ESIRDVKFSPGYGNKFASIHDS-----GYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDK  242 (839)
T ss_pred             c--------hhhhceeeccCCCceEEEecCC-----ceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCc
Confidence            3        4899999999877666666543     48999999976 56677889999999999999999999999999


Q ss_pred             -EEEEEcCCCceecce-------eeeEEEccchhhhHhhcCCc--ceEEEEEEecCchhHHHHHh
Q psy7108         274 -VHIYSLDSGYVFDPF-------LLDISITPQSVKEALADKDY--AKALMMSLKLNEQGLIIHVL  328 (703)
Q Consensus       274 -v~iwd~~~~~~~~~~-------~~~~~~spd~~~~~l~sg~~--~~~l~la~~l~~~~~~~~v~  328 (703)
                       |+||+..+.+.....       ...+.|-|+.. ..|++++.  +..+.+ |++..|.+....+
T Consensus       243 ~vkiWd~t~~~~~~~~tInTiapv~rVkWRP~~~-~hLAtcsmv~dtsV~V-WDvrRPYIP~~t~  305 (839)
T KOG0269|consen  243 MVKIWDMTDSRAKPKHTINTIAPVGRVKWRPARS-YHLATCSMVVDTSVHV-WDVRRPYIPYATF  305 (839)
T ss_pred             cEEEEeccCCCccceeEEeecceeeeeeeccCcc-chhhhhhccccceEEE-Eeeccccccceee
Confidence             999999876553222       25688988773 45665553  456666 8887776555543

>KOG1009|consensus

Probab=99.73  E-value=1.5e-16  Score=158.94  Aligned_cols=281  Identities=18%  Similarity=0.250  Sum_probs=201.6

Q ss_pred             eecccCCceEEecCCceeeccCC-----CccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcC--------
Q psy7108          13 RETHEGGNVVLKLPGVKKGDMAA-----RVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAV--------   79 (703)
Q Consensus        13 ~~~~~~~~~~i~~~~v~~~d~tg-----~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~--------   79 (703)
                      +++..|++.-+++|.+......+     +.+  ..|..|...|+++.|+|  +|++||||+++|.|.+|-..        
T Consensus        28 ~laT~G~D~~iriW~v~r~~~~~~~~~V~y~--s~Ls~H~~aVN~vRf~p--~gelLASg~D~g~v~lWk~~~~~~~~~d  103 (434)
T KOG1009|consen   28 KLATAGGDKDIRIWKVNRSEPGGGDMKVEYL--SSLSRHTRAVNVVRFSP--DGELLASGGDGGEVFLWKQGDVRIFDAD  103 (434)
T ss_pred             ceecccCccceeeeeeeecCCCCCceeEEEe--ecccCCcceeEEEEEcC--CcCeeeecCCCceEEEEEecCcCCcccc
Confidence            56778888999999877655433     233  67899999999999999  99999999999999999765        


Q ss_pred             C-----Cc--e-eEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhccc
Q psy7108          80 E-----TD--T-QHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSL  151 (703)
Q Consensus        80 ~-----~~--~-~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (703)
                      +     .+  . ......|...|..++|+||+..+++++.|..+++||+..|+....+..|..                 
T Consensus       104 ~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~-----------------  166 (434)
T KOG1009|consen  104 TEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILDDHEH-----------------  166 (434)
T ss_pred             chhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccceeEeecccccc-----------------
Confidence            2     10  1 123345889999999999999999999999999999999999999888876                 


Q ss_pred             CCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEE-----eccC-----C-----ccccccccceeeeeccCCC
Q psy7108         152 KAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFT-----ITQN-----K-----SLDGINDFINRRKMTEFGN  216 (703)
Q Consensus       152 ~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~-----~~~~-----~-----~~~~~~~~v~~~~~spdg~  216 (703)
                         .+..++|.|-++++++-+.|...+.+++...+.+....     ....     .     .-+........++|+|+|.
T Consensus       167 ---yvqgvawDpl~qyv~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG~  243 (434)
T KOG1009|consen  167 ---YVQGVAWDPLNQYVASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPDGS  243 (434)
T ss_pred             ---ccceeecchhhhhhhhhccCcccceeeeeeeeeeeeeeeeEeeecccCCCCcceeeeeecCchhhhhhhcccCCCCc
Confidence               78999999999999998888877777665443332221     0000     0     0012334678899999999


Q ss_pred             EEEEEcccCCCCC---eeEEECCCCCC-CccceeecCCccceEEEEEcC------------------CCCEEEEEeCCCE
Q psy7108         217 VSLIETRETHEGG---NVVLKLPGVKK-GDMAARVLKPEVRVFCVKFSP------------------TGQAWVAATTEGV  274 (703)
Q Consensus       217 ~l~~~~~~~~~~~---~~~i~iwd~~~-~~~~~~~~~h~~~V~~l~~sp------------------dg~~l~s~s~Dgv  274 (703)
                      .+++.++--..++   .+..++++.+. .++...+......+..+.|+|                  -+-.+|.++.+.|
T Consensus       244 llvtPag~~~~g~~~~~n~tYvfsrk~l~rP~~~lp~~~k~~lavr~~pVy~elrp~~~~~~~~~lpyrlvfaiAt~~sv  323 (434)
T KOG1009|consen  244 LLVTPAGLFKVGGGVFRNTSYVFSRKDLKRPAARLPSPKKPALAVRFSPVYYELRPLSSEKFLFVLPYRLVFAIATKNSV  323 (434)
T ss_pred             EEEcccceeeeCCceeeceeEeeccccccCceeecCCCCcceEEEEeeeeEEEeccccccccccccccceEEEEeecceE
Confidence            9887653211111   24556665442 244555555555666666655                  2335688888889


Q ss_pred             EEEEcCCCceecce-------eeeEEEccchhhhHhhcCCcceEEEEEEecCc
Q psy7108         275 HIYSLDSGYVFDPF-------LLDISITPQSVKEALADKDYAKALMMSLKLNE  320 (703)
Q Consensus       275 ~iwd~~~~~~~~~~-------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~  320 (703)
                      .|||.++..++...       ..+++|++||  ..++..+.|+-..+ ...+.
T Consensus       324 yvydtq~~~P~~~v~nihy~~iTDiaws~dg--~~l~vSS~DGyCS~-vtfe~  373 (434)
T KOG1009|consen  324 YVYDTQTLEPLAVVDNIHYSAITDIAWSDDG--SVLLVSSTDGFCSL-VTFEP  373 (434)
T ss_pred             EEeccccccceEEEeeeeeeeecceeecCCC--cEEEEeccCCceEE-EEEcc
Confidence            99998876654332       3679999999  77777777776655 44443

>KOG2048|consensus

Probab=99.73  E-value=2.8e-15  Score=158.58  Aligned_cols=242  Identities=12%  Similarity=0.153  Sum_probs=185.4

Q ss_pred             ccccCC-CcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEE
Q psy7108          41 EVLSGH-EGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFD  119 (703)
Q Consensus        41 ~~l~gH-~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd  119 (703)
                      .++.|+ ...|.+++|++   +..|.|.+.+|.|.-||+.+.++........+.|.+++.+|.+..++.|+.||.+..++
T Consensus        62 ~vi~g~~drsIE~L~W~e---~~RLFS~g~sg~i~EwDl~~lk~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s  138 (691)
T KOG2048|consen   62 PVIHGPEDRSIESLAWAE---GGRLFSSGLSGSITEWDLHTLKQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFS  138 (691)
T ss_pred             EEEecCCCCceeeEEEcc---CCeEEeecCCceEEEEecccCceeEEecCCCcceeEEEeCCccceEEeecCCceEEEEe
Confidence            566666 56899999996   67888999999999999999988888878889999999999999999999999888888


Q ss_pred             cCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCcc
Q psy7108         120 VESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSL  199 (703)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~  199 (703)
                      ...++......-.+                  ..+.|.+++|+|++..|++|+.||.|++||+.++..+...+......-
T Consensus       139 ~~p~~I~~~r~l~r------------------q~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~  200 (691)
T KOG2048|consen  139 IGPDKITYKRSLMR------------------QKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLS  200 (691)
T ss_pred             cCCceEEEEeeccc------------------ccceEEEEEecCCccEEEecccCceEEEEEcCCCceEEEeeecccccc
Confidence            77765533221111                  123799999999999999999999999999999987774443322222


Q ss_pred             ccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEE
Q psy7108         200 DGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYS  278 (703)
Q Consensus       200 ~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd  278 (703)
                      .+...-|.++.+-.++.. +.+.+.|      .|++||...+.+++....|+..|.+++.+++++++++++.|+ +.-|.
T Consensus       201 k~~~~iVWSv~~Lrd~tI-~sgDS~G------~V~FWd~~~gTLiqS~~~h~adVl~Lav~~~~d~vfsaGvd~~ii~~~  273 (691)
T KOG2048|consen  201 KREPTIVWSVLFLRDSTI-ASGDSAG------TVTFWDSIFGTLIQSHSCHDADVLALAVADNEDRVFSAGVDPKIIQYS  273 (691)
T ss_pred             cCCceEEEEEEEeecCcE-EEecCCc------eEEEEcccCcchhhhhhhhhcceeEEEEcCCCCeEEEccCCCceEEEE
Confidence            223346788888877664 4444433      899999999999999999999999999999999999999999 77776


Q ss_pred             cCCCce----------ecceeeeEEEccchhhhHhhcCCcceEEEE
Q psy7108         279 LDSGYV----------FDPFLLDISITPQSVKEALADKDYAKALMM  314 (703)
Q Consensus       279 ~~~~~~----------~~~~~~~~~~spd~~~~~l~sg~~~~~l~l  314 (703)
                      ..++..          +..-..+++..++    .+.+|+.|..+.+
T Consensus       274 ~~~~~~~wv~~~~r~~h~hdvrs~av~~~----~l~sgG~d~~l~i  315 (691)
T KOG2048|consen  274 LTTNKSEWVINSRRDLHAHDVRSMAVIEN----ALISGGRDFTLAI  315 (691)
T ss_pred             ecCCccceeeeccccCCcccceeeeeecc----eEEecceeeEEEE
Confidence            655432          1111244555554    5667777777665

>KOG0646|consensus

Probab=99.73  E-value=1.6e-16  Score=161.38  Aligned_cols=226  Identities=13%  Similarity=0.134  Sum_probs=176.6

Q ss_pred             EEeeecccCCceEEec---CCceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCC-----
Q psy7108          10 IETRETHEGGNVVLKL---PGVKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVE-----   80 (703)
Q Consensus        10 ~~~~~~~~~~~~~i~~---~~v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~-----   80 (703)
                      +..+.+.+.+..++.-   -++.+|. .+|.++  .++.+|-.+|+|+.|+-  ||.+|+|||.||.|.+|++.+     
T Consensus        84 v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL--~v~~aHYQ~ITcL~fs~--dgs~iiTgskDg~V~vW~l~~lv~a~  159 (476)
T KOG0646|consen   84 VHALASSNLGYFLLAGTISGNLYLWELSSGILL--NVLSAHYQSITCLKFSD--DGSHIITGSKDGAVLVWLLTDLVSAD  159 (476)
T ss_pred             eeeeecCCCceEEEeecccCcEEEEEeccccHH--HHHHhhccceeEEEEeC--CCcEEEecCCCccEEEEEEEeecccc
Confidence            4445555555554443   3355666 589999  99999999999999999  999999999999999998732     


Q ss_pred             ----CceeEEEecCCCcEEEEEEecCC--CEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCc
Q psy7108          81 ----TDTQHETIQLLSDALCVAYKPDG--TEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAK  154 (703)
Q Consensus        81 ----~~~~~~~~~~~~~V~~v~~spdg--~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (703)
                          -.....+..|.-+|+++...+.|  .++++++.|.++++||+..+..+.++....                     
T Consensus       160 ~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~fp~---------------------  218 (476)
T KOG0646|consen  160 NDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTITFPS---------------------  218 (476)
T ss_pred             cCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEecCC---------------------
Confidence                12334555688899998877653  689999999999999999999888876654                     


Q ss_pred             cEEEEEEcCCCCEEEEEecCCcEEEEECCCCce--------EEEEEeccCCccccccc--cceeeeeccCCCEEEEEccc
Q psy7108         155 AVSTVCYSADGSCILAAGQSKYICIYSSREGIL--------LKKFTITQNKSLDGIND--FINRRKMTEFGNVSLIETRE  224 (703)
Q Consensus       155 ~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~--------~~~~~~~~~~~~~~~~~--~v~~~~~spdg~~l~~~~~~  224 (703)
                      .+.+++.+|-++.+.+|+.+|.|.+.++.....        .............||..  .|+|++++-||..++.+..+
T Consensus       219 si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~d  298 (476)
T KOG0646|consen  219 SIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSGDED  298 (476)
T ss_pred             cceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecCccEEEeeCCC
Confidence            689999999999999999999999988765321        11122222334455665  99999999999999988776


Q ss_pred             CCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEE
Q psy7108         225 THEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAW  266 (703)
Q Consensus       225 ~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l  266 (703)
                      |      .+++||+.+.++++++....++|+.+.+.|-.+-.
T Consensus       299 g------~VcvWdi~S~Q~iRtl~~~kgpVtnL~i~~~~~~~  334 (476)
T KOG0646|consen  299 G------KVCVWDIYSKQCIRTLQTSKGPVTNLQINPLERGI  334 (476)
T ss_pred             C------CEEEEecchHHHHHHHhhhccccceeEeeccccce
Confidence            4      89999999999998888778899999997754433

>KOG1034|consensus

Probab=99.73  E-value=1.6e-17  Score=161.46  Aligned_cols=250  Identities=16%  Similarity=0.199  Sum_probs=173.4

Q ss_pred             cccCCceEEecCCceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEe---cCC
Q psy7108          15 THEGGNVVLKLPGVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETI---QLL   91 (703)
Q Consensus        15 ~~~~~~~~i~~~~v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~---~~~   91 (703)
                      +..|.-++|++-++.    ++++.  ..+.||...|+.+.+.|. +.+++++||.|.+||+|++++..++..+-   +|.
T Consensus       109 a~~G~~GvIrVid~~----~~~~~--~~~~ghG~sINeik~~p~-~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHr  181 (385)
T KOG1034|consen  109 AAGGYLGVIRVIDVV----SGQCS--KNYRGHGGSINEIKFHPD-RPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHR  181 (385)
T ss_pred             EeecceeEEEEEecc----hhhhc--cceeccCccchhhhcCCC-CCcEEEEecCCceEEEEeccCCeEEEEeccccccc
Confidence            334455555555444    67777  888999999999999994 56799999999999999999987665543   499


Q ss_pred             CcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCC-------Cccchh-hcccCCccEEEEEEcC
Q psy7108          92 SDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLD-------TDLVTR-EQSLKAKAVSTVCYSA  163 (703)
Q Consensus        92 ~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~-~~~~~~~~V~~i~~sp  163 (703)
                      +.|.++.|+++|.+|++++.|.++++|++...+....++....+......       ...+.. ....|...|-|+.|- 
T Consensus       182 deVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~-  260 (385)
T KOG1034|consen  182 DEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWF-  260 (385)
T ss_pred             CcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccccccccchHHHHHHH-
Confidence            99999999999999999999999999999865544333332221111100       011111 345677888888886 


Q ss_pred             CCCEEEEEecCCcEEEEECC-CCceEEEEEeccC-------CccccccccceeeeeccCCCEEEEEcccCCCCCeeEEEC
Q psy7108         164 DGSCILAAGQSKYICIYSSR-EGILLKKFTITQN-------KSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKL  235 (703)
Q Consensus       164 dg~~l~s~s~dg~I~lwD~~-~~~~~~~~~~~~~-------~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~i  235 (703)
                       |.++++-+-++.|..|... -++.+.....+..       ..++....+....+|.|-++.++.+...|      .+.+
T Consensus       261 -gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g------~v~v  333 (385)
T KOG1034|consen  261 -GDFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLALGNQSG------KVYV  333 (385)
T ss_pred             -hhheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHHHhhccCCC------cEEE
Confidence             6889998888999999872 1222111110000       01111112344556778888888877654      7999


Q ss_pred             CCCCCCccce-eecC---CccceEEEEEcCCCCEEEEEeCCC-EEEEEc
Q psy7108         236 PGVKKGDMAA-RVLK---PEVRVFCVKFSPTGQAWVAATTEG-VHIYSL  279 (703)
Q Consensus       236 wd~~~~~~~~-~~~~---h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~  279 (703)
                      ||++..++.. ....   ....|...+||.||..|+..++|+ |.-||.
T Consensus       334 wdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwdr  382 (385)
T KOG1034|consen  334 WDLDNNEPPKCTTLTHSKSGSTVRQTSFSRDGSILVLVCDDGTVWRWDR  382 (385)
T ss_pred             EECCCCCCccCceEEeccccceeeeeeecccCcEEEEEeCCCcEEEEEe
Confidence            9999876632 1111   245689999999999999999999 888885

>KOG0650|consensus

Probab=99.72  E-value=1.6e-16  Score=165.23  Aligned_cols=253  Identities=15%  Similarity=0.220  Sum_probs=188.2

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCC--EEEEEECCCeEEEE
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGT--EIVVATLDGQLIMF  118 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~--~las~s~dg~I~vw  118 (703)
                      -.+.||++.|.|++..|  .|.+|++|+.||+||||.+.++.++.. ....+.|.|++|+|.+.  .||++. +..+.+.
T Consensus       394 lvyrGHtg~Vr~iSvdp--~G~wlasGsdDGtvriWEi~TgRcvr~-~~~d~~I~~vaw~P~~~~~vLAvA~-~~~~~iv  469 (733)
T KOG0650|consen  394 LVYRGHTGLVRSISVDP--SGEWLASGSDDGTVRIWEIATGRCVRT-VQFDSEIRSVAWNPLSDLCVLAVAV-GECVLIV  469 (733)
T ss_pred             eeEeccCCeEEEEEecC--CcceeeecCCCCcEEEEEeecceEEEE-EeecceeEEEEecCCCCceeEEEEe-cCceEEe
Confidence            46789999999999999  999999999999999999999966554 45667999999999875  445544 4447777


Q ss_pred             EcCCCcEEEEEeccccCCCCC------------CC-----CccchhhcccCCccEEEEEEcCCCCEEEEEecC---CcEE
Q psy7108         119 DVESAAQVGSVEARRDLDSGR------------LD-----TDLVTREQSLKAKAVSTVCYSADGSCILAAGQS---KYIC  178 (703)
Q Consensus       119 d~~~~~~~~~~~~~~~~~~~~------------~~-----~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d---g~I~  178 (703)
                      +..-|..+..-.....+....            ..     ...-......|...|..+.|+..|.+|++...+   ..|.
T Consensus       470 np~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~Vl  549 (733)
T KOG0650|consen  470 NPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVL  549 (733)
T ss_pred             CccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEE
Confidence            655443222111111110000            00     000012234577899999999999999986543   4689


Q ss_pred             EEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEE
Q psy7108         179 IYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVK  258 (703)
Q Consensus       179 lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~  258 (703)
                      |+++........|....        ..+.++.|+|...++++++..       .|++||+..++.+..+......|.+++
T Consensus       550 iHQLSK~~sQ~PF~ksk--------G~vq~v~FHPs~p~lfVaTq~-------~vRiYdL~kqelvKkL~tg~kwiS~ms  614 (733)
T KOG0650|consen  550 IHQLSKRKSQSPFRKSK--------GLVQRVKFHPSKPYLFVATQR-------SVRIYDLSKQELVKKLLTGSKWISSMS  614 (733)
T ss_pred             EEecccccccCchhhcC--------CceeEEEecCCCceEEEEecc-------ceEEEehhHHHHHHHHhcCCeeeeeee
Confidence            99988765544443222        378899999999999998874       799999999888888888888899999


Q ss_pred             EcCCCCEEEEEeCCC-EEEEEcCCCce-------ecceeeeEEEccchhhhHhhcCCcceEEEE
Q psy7108         259 FSPTGQAWVAATTEG-VHIYSLDSGYV-------FDPFLLDISITPQSVKEALADKDYAKALMM  314 (703)
Q Consensus       259 ~spdg~~l~s~s~Dg-v~iwd~~~~~~-------~~~~~~~~~~spd~~~~~l~sg~~~~~l~l  314 (703)
                      .+|.|.-|+.++.|+ +..||++-+..       +.....++++++.-  .++++++.|+++.+
T Consensus       615 ihp~GDnli~gs~d~k~~WfDldlsskPyk~lr~H~~avr~Va~H~ry--PLfas~sdDgtv~V  676 (733)
T KOG0650|consen  615 IHPNGDNLILGSYDKKMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRY--PLFASGSDDGTVIV  676 (733)
T ss_pred             ecCCCCeEEEecCCCeeEEEEcccCcchhHHhhhhhhhhhhhhhcccc--ceeeeecCCCcEEE
Confidence            999999999999999 99999875532       23334678888877  88999999999887

>KOG4283|consensus

Probab=99.72  E-value=2e-15  Score=144.78  Aligned_cols=200  Identities=15%  Similarity=0.212  Sum_probs=158.4

Q ss_pred             ccCCceEEecCCceeec---cCC-----Ccc-ccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEE
Q psy7108          16 HEGGNVVLKLPGVKKGD---MAA-----RVL-KPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHE   86 (703)
Q Consensus        16 ~~~~~~~i~~~~v~~~d---~tg-----~~~-~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~   86 (703)
                      ..|.+..+.+|+++.-+   ..+     +++ ....-.+|+-.|.++.|-|. |...+.|+|-|.++++||..+. +...
T Consensus        61 SGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~-DtGmFtssSFDhtlKVWDtnTl-Q~a~  138 (397)
T KOG4283|consen   61 SGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPI-DTGMFTSSSFDHTLKVWDTNTL-QEAV  138 (397)
T ss_pred             ecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeee-cCceeecccccceEEEeecccc-eeeE
Confidence            56778888888876543   122     111 00123578899999999997 8889999999999999999877 4555


Q ss_pred             EecCCCcEEEEEEecCC---CEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC
Q psy7108          87 TIQLLSDALCVAYKPDG---TEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA  163 (703)
Q Consensus        87 ~~~~~~~V~~v~~spdg---~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp  163 (703)
                      .+..++.|++-++||-.   .++|+|..|-.|++.|+.+|...+++.+|.+                    .|.++.|+|
T Consensus       139 ~F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~--------------------~vlaV~Wsp  198 (397)
T KOG4283|consen  139 DFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRD--------------------GVLAVEWSP  198 (397)
T ss_pred             EeecCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccC--------------------ceEEEEecc
Confidence            66788899999999843   4788888899999999999999999999887                    899999999


Q ss_pred             CCCE-EEEEecCCcEEEEECCCC-ceEEEEEeccCC------ccccccccceeeeeccCCCEEEEEcccCCCCCeeEEEC
Q psy7108         164 DGSC-ILAAGQSKYICIYSSREG-ILLKKFTITQNK------SLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKL  235 (703)
Q Consensus       164 dg~~-l~s~s~dg~I~lwD~~~~-~~~~~~~~~~~~------~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~i  235 (703)
                      ...+ |++|+.||.|++||++.. -|...+..|...      .-.+|...+++++|+.+|.+++..+.++      .+++
T Consensus       199 ~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~------r~r~  272 (397)
T KOG4283|consen  199 SSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDD------RIRV  272 (397)
T ss_pred             CceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCcc------ceEE
Confidence            8776 567899999999999864 566666655421      1235677899999999999998877664      7999


Q ss_pred             CCCCCCcc
Q psy7108         236 PGVKKGDM  243 (703)
Q Consensus       236 wd~~~~~~  243 (703)
                      |+..+|+.
T Consensus       273 wn~~~G~n  280 (397)
T KOG4283|consen  273 WNMESGRN  280 (397)
T ss_pred             eecccCcc
Confidence            99888754

>KOG2106|consensus

Probab=99.71  E-value=1.3e-15  Score=155.62  Aligned_cols=252  Identities=13%  Similarity=0.193  Sum_probs=186.3

Q ss_pred             ccccCC-CcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEE
Q psy7108          41 EVLSGH-EGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFD  119 (703)
Q Consensus        41 ~~l~gH-~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd  119 (703)
                      .+++++ +.-|.|++|.+  +|+ ++||..+|+|.||+..+....++...|.+.|.+++...+|..|- |+.|..|..||
T Consensus       239 ~~fek~ekk~Vl~v~F~e--ngd-viTgDS~G~i~Iw~~~~~~~~k~~~aH~ggv~~L~~lr~GtllS-GgKDRki~~Wd  314 (626)
T KOG2106|consen  239 GIFEKREKKFVLCVTFLE--NGD-VITGDSGGNILIWSKGTNRISKQVHAHDGGVFSLCMLRDGTLLS-GGKDRKIILWD  314 (626)
T ss_pred             eccccccceEEEEEEEcC--CCC-EEeecCCceEEEEeCCCceEEeEeeecCCceEEEEEecCccEee-cCccceEEecc
Confidence            345554 46799999998  665 67999999999999977776777779999999999999997654 99999999999


Q ss_pred             cCCCcEEEE-------------EeccccCCCCCC--------CCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEE
Q psy7108         120 VESAAQVGS-------------VEARRDLDSGRL--------DTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYIC  178 (703)
Q Consensus       120 ~~~~~~~~~-------------~~~~~~~~~~~~--------~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~  178 (703)
                      - .-+.++.             .+++.++.-+..        -.+.......+|++..+.++.+|+...+++++.|+.++
T Consensus       315 ~-~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~gqdk~v~  393 (626)
T KOG2106|consen  315 D-NYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTCGQDKHVR  393 (626)
T ss_pred             c-cccccccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCChhheeeccCcceEE
Confidence            3 2222221             222222111110        11112223446888999999999999999999999999


Q ss_pred             EEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEE
Q psy7108         179 IYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVK  258 (703)
Q Consensus       179 lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~  258 (703)
                      +|+  ..++.-+..         ..+++.++.|+|.| .+++++..|      ...+.|.++...+..-.. ..++++++
T Consensus       394 lW~--~~k~~wt~~---------~~d~~~~~~fhpsg-~va~Gt~~G------~w~V~d~e~~~lv~~~~d-~~~ls~v~  454 (626)
T KOG2106|consen  394 LWN--DHKLEWTKI---------IEDPAECADFHPSG-VVAVGTATG------RWFVLDTETQDLVTIHTD-NEQLSVVR  454 (626)
T ss_pred             Ecc--CCceeEEEE---------ecCceeEeeccCcc-eEEEeeccc------eEEEEecccceeEEEEec-CCceEEEE
Confidence            999  334433322         23477899999999 788877664      677788888666655445 88999999


Q ss_pred             EcCCCCEEEEEeCCC-EEEEEcCCCc--------eecceeeeEEEccchhhhHhhcCCcceEEEEEEecC
Q psy7108         259 FSPTGQAWVAATTEG-VHIYSLDSGY--------VFDPFLLDISITPQSVKEALADKDYAKALMMSLKLN  319 (703)
Q Consensus       259 ~spdg~~l~s~s~Dg-v~iwd~~~~~--------~~~~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~  319 (703)
                      |+|+|.+||.|+.|+ |+||.++.+.        +...+...++||+|+  +++.+.+-|-.+.. |..+
T Consensus       455 ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~Ds--~~~~~~S~d~eiLy-W~~~  521 (626)
T KOG2106|consen  455 YSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKCSGSPITHLDWSSDS--QFLVSNSGDYEILY-WKPS  521 (626)
T ss_pred             EcCCCCEEEEecCCCeEEEEEECCCCcEEEEeeeecCceeEEeeecCCC--ceEEeccCceEEEE-Eccc
Confidence            999999999999999 9999886432        223455779999999  88888777777776 7443

>KOG0270|consensus

Probab=99.70  E-value=4.8e-16  Score=156.94  Aligned_cols=206  Identities=14%  Similarity=0.183  Sum_probs=158.0

Q ss_pred             ccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCC-CEEEEEECCCeEEEEEcC
Q psy7108          43 LSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDG-TEIVVATLDGQLIMFDVE  121 (703)
Q Consensus        43 l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg-~~las~s~dg~I~vwd~~  121 (703)
                      -++|++.|-+++|+.. -.+.|||||.|.+|++||+.++++...+..|...|.++.|+|.. ..|++|+.|++|.+.|.+
T Consensus       239 ~~gHTdavl~Ls~n~~-~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R  317 (463)
T KOG0270|consen  239 ASGHTDAVLALSWNRN-FRNVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCR  317 (463)
T ss_pred             cccchHHHHHHHhccc-cceeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeecc
Confidence            3479999999999984 56799999999999999999998777777799999999999965 688999999999999998


Q ss_pred             CCcEE-EEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCC-CEEEEEecCCcEEEEECCCC-ceEEEEEeccCCc
Q psy7108         122 SAAQV-GSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADG-SCILAAGQSKYICIYSSREG-ILLKKFTITQNKS  198 (703)
Q Consensus       122 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg-~~l~s~s~dg~I~lwD~~~~-~~~~~~~~~~~~~  198 (703)
                      ..... ..++.                     .+.|..++|.|.. ..+++++.||+++-+|+|.. +++.++..|..  
T Consensus       318 ~~~~s~~~wk~---------------------~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~--  374 (463)
T KOG0270|consen  318 DPSNSGKEWKF---------------------DGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDD--  374 (463)
T ss_pred             CccccCceEEe---------------------ccceEEEEecCCCceeEEEecCCceEEeeecCCCCCceeEEEeccC--
Confidence            42211 11111                     1268999999955 55677789999999999985 77877776554  


Q ss_pred             cccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCC---ccceEEEEEcCCCCE-EEEEeCCC-
Q psy7108         199 LDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKP---EVRVFCVKFSPTGQA-WVAATTEG-  273 (703)
Q Consensus       199 ~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h---~~~V~~l~~spdg~~-l~s~s~Dg-  273 (703)
                            .|.++++++.-..++++++.+     ..+++|++...+... ...|   -+...|.++.|+-.. ++.|+..+ 
T Consensus       375 ------~ISgl~~n~~~p~~l~t~s~d-----~~Vklw~~~~~~~~~-v~~~~~~~~rl~c~~~~~~~a~~la~GG~k~~  442 (463)
T KOG0270|consen  375 ------EISGLSVNIQTPGLLSTASTD-----KVVKLWKFDVDSPKS-VKEHSFKLGRLHCFALDPDVAFTLAFGGEKAV  442 (463)
T ss_pred             ------CcceEEecCCCCcceeecccc-----ceEEEEeecCCCCcc-cccccccccceeecccCCCcceEEEecCccce
Confidence                  899999999888777665443     589999876543321 1122   234667788887665 57777777 


Q ss_pred             EEEEEcCCCce
Q psy7108         274 VHIYSLDSGYV  284 (703)
Q Consensus       274 v~iwd~~~~~~  284 (703)
                      ++|||+.+...
T Consensus       443 ~~vwd~~~~~~  453 (463)
T KOG0270|consen  443 LRVWDIFTNSP  453 (463)
T ss_pred             EEEeecccChh
Confidence            99999987654

>KOG4328|consensus

Probab=99.70  E-value=2.1e-16  Score=159.94  Aligned_cols=253  Identities=12%  Similarity=0.161  Sum_probs=187.0

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc----eeEEEecCCCcEEEEEEecCC-CEEEEEECCCeE
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD----TQHETIQLLSDALCVAYKPDG-TEIVVATLDGQL  115 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~----~~~~~~~~~~~V~~v~~spdg-~~las~s~dg~I  115 (703)
                      .+..-|.++|++++|+|....+++|+|+.-|+|-+||+.+.+    .......|..+|.++.|+|.+ ..+++.+.||+|
T Consensus       180 ~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGti  259 (498)
T KOG4328|consen  180 NVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTI  259 (498)
T ss_pred             ceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCcee
Confidence            456678999999999996334788999999999999995332    244555699999999999966 588999999999


Q ss_pred             EEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCce-EEEEEec
Q psy7108         116 IMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGIL-LKKFTIT  194 (703)
Q Consensus       116 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~-~~~~~~~  194 (703)
                      +.-|++++..-..+....+                  ...+..+.|+.+...++.+..=|...+||++++.. ...+.. 
T Consensus       260 R~~D~~~~i~e~v~s~~~d------------------~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~l-  320 (498)
T KOG4328|consen  260 RLQDFEGNISEEVLSLDTD------------------NIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRL-  320 (498)
T ss_pred             eeeeecchhhHHHhhcCcc------------------ceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhh-
Confidence            9999987643222222111                  12577888988888888887778999999998644 333333 


Q ss_pred             cCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcc----ceeecCCccceEEEEEcCCCCEEEEEe
Q psy7108         195 QNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDM----AARVLKPEVRVFCVKFSPTGQAWVAAT  270 (703)
Q Consensus       195 ~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~----~~~~~~h~~~V~~l~~spdg~~l~s~s  270 (703)
                             |...|++++++|...+++++++.+     .+.+|||++.-..    ......|...|.+..|||++-.|+|.+
T Consensus       321 -------h~kKI~sv~~NP~~p~~laT~s~D-----~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~  388 (498)
T KOG4328|consen  321 -------HKKKITSVALNPVCPWFLATASLD-----QTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTC  388 (498)
T ss_pred             -------hhcccceeecCCCCchheeecccC-----cceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeec
Confidence                   334899999999998777766543     5899999986432    234557999999999999988899999


Q ss_pred             CCC-EEEEEcC----CCceecce-----------eeeEEEccchhhhHhhcCCcceEEEEEEecCchhHHHHH
Q psy7108         271 TEG-VHIYSLD----SGYVFDPF-----------LLDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIHV  327 (703)
Q Consensus       271 ~Dg-v~iwd~~----~~~~~~~~-----------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~~~~~~v  327 (703)
                      .|. |+|||..    .-......           .....|.|+.  .++..|.+...|.+ ++-+..+.+.++
T Consensus       389 ~D~~IRv~dss~~sa~~~p~~~I~Hn~~t~RwlT~fKA~W~P~~--~li~vg~~~r~IDv-~~~~~~q~v~el  458 (498)
T KOG4328|consen  389 QDNEIRVFDSSCISAKDEPLGTIPHNNRTGRWLTPFKAAWDPDY--NLIVVGRYPRPIDV-FDGNGGQMVCEL  458 (498)
T ss_pred             cCCceEEeecccccccCCccceeeccCcccccccchhheeCCCc--cEEEEeccCcceeE-EcCCCCEEeeec
Confidence            999 9999973    11111111           1346888988  88888888888877 666555544443

>KOG2096|consensus

Probab=99.70  E-value=1.7e-15  Score=146.66  Aligned_cols=203  Identities=15%  Similarity=0.157  Sum_probs=151.8

Q ss_pred             CCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcC---
Q psy7108          45 GHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVE---  121 (703)
Q Consensus        45 gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~---  121 (703)
                      -|.-.|-.+-...  ++.+|+|++.|.+|.+|++. ++.+..+-.....-+..+.||+|+++++++---.|++|.+-   
T Consensus       185 kh~v~~i~iGiA~--~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~k  261 (420)
T KOG2096|consen  185 KHQVDIINIGIAG--NAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTK  261 (420)
T ss_pred             hcccceEEEeecC--CceEEEEecCCCcEEEEecC-CceeeeeccccccccceeeCCCCcEEEEecCCCCceEEEEEecc
Confidence            4666777777777  88999999999999999997 55555555555566778999999999999998999999862   


Q ss_pred             CCc-----EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCC----ceEEEEE
Q psy7108         122 SAA-----QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREG----ILLKKFT  192 (703)
Q Consensus       122 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~----~~~~~~~  192 (703)
                      .|+     .+-.+.+                    |...|...+|+++...+++.+.||++++||..-.    +-.+.+.
T Consensus       262 dG~fqev~rvf~LkG--------------------H~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~qDpk~Lk  321 (420)
T KOG2096|consen  262 DGTFQEVKRVFSLKG--------------------HQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYEAGQDPKILK  321 (420)
T ss_pred             Ccchhhhhhhheecc--------------------chhheeeeeeCCCcceeEEEecCCcEEEeeccceEecCCCchHhh
Confidence            221     1223444                    4458999999999999999999999999998531    1111111


Q ss_pred             eccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeec-CCccceEEEEEcCCCCEEEEEeC
Q psy7108         193 ITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL-KPEVRVFCVKFSPTGQAWVAATT  271 (703)
Q Consensus       193 ~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~-~h~~~V~~l~~spdg~~l~s~s~  271 (703)
                      ... ..+..-...-..+..+|.|+.++++...       .++++..++|+....+. .|...|.+++|+++|++++++++
T Consensus       322 ~g~-~pl~aag~~p~RL~lsP~g~~lA~s~gs-------~l~~~~se~g~~~~~~e~~h~~~Is~is~~~~g~~~atcGd  393 (420)
T KOG2096|consen  322 EGS-APLHAAGSEPVRLELSPSGDSLAVSFGS-------DLKVFASEDGKDYPELEDIHSTTISSISYSSDGKYIATCGD  393 (420)
T ss_pred             cCC-cchhhcCCCceEEEeCCCCcEEEeecCC-------ceEEEEcccCccchhHHHhhcCceeeEEecCCCcEEeeecc
Confidence            110 1111112233479999999999988765       59999888887655554 48899999999999999999997


Q ss_pred             CCEEEEE
Q psy7108         272 EGVHIYS  278 (703)
Q Consensus       272 Dgv~iwd  278 (703)
                      ..++++.
T Consensus       394 r~vrv~~  400 (420)
T KOG2096|consen  394 RYVRVIR  400 (420)
T ss_pred             eeeeeec
Confidence            6688776

>KOG0302|consensus

Probab=99.70  E-value=6.4e-16  Score=152.85  Aligned_cols=211  Identities=12%  Similarity=0.128  Sum_probs=154.8

Q ss_pred             ccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCC----------------ceeEEEecCCCcEEEEEEecCC-CE
Q psy7108          43 LSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVET----------------DTQHETIQLLSDALCVAYKPDG-TE  105 (703)
Q Consensus        43 l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~----------------~~~~~~~~~~~~V~~v~~spdg-~~  105 (703)
                      .-+|.+.++.+.-++.++..+.++=+..|.|+||++...                ..+..+..|...-+.++|||-- ..
T Consensus       147 ~i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~  226 (440)
T KOG0302|consen  147 SIPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGR  226 (440)
T ss_pred             ccccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeecccccccc
Confidence            347888999999888323344555577899999998421                1344555688888999999933 24


Q ss_pred             EEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCC-CEEEEEecCCcEEEEECCC
Q psy7108         106 IVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADG-SCILAAGQSKYICIYSSRE  184 (703)
Q Consensus       106 las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg-~~l~s~s~dg~I~lwD~~~  184 (703)
                      |++|..-+.|++|...++.-...                 ..+...|...|..++|||.. ..|++||-|++|+|||+|.
T Consensus       227 LlsGDc~~~I~lw~~~~g~W~vd-----------------~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs  289 (440)
T KOG0302|consen  227 LLSGDCVKGIHLWEPSTGSWKVD-----------------QRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRS  289 (440)
T ss_pred             cccCccccceEeeeeccCceeec-----------------CccccccccchhhhccCCccCceEEeeecCceEEEEEecC
Confidence            78887788999999887643210                 01223356689999999954 5788999999999999998


Q ss_pred             CceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCC---CccceeecCCccceEEEEEcC
Q psy7108         185 GILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKK---GDMAARVLKPEVRVFCVKFSP  261 (703)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~---~~~~~~~~~h~~~V~~l~~sp  261 (703)
                      +.....+.      .++|.+.|+.+.|+..-.++++++.+|      +++|||+++   ++++..+..|..+|+++.|+|
T Consensus       290 ~~~~~~~~------~kAh~sDVNVISWnr~~~lLasG~DdG------t~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p  357 (440)
T KOG0302|consen  290 GPKKAAVS------TKAHNSDVNVISWNRREPLLASGGDDG------TLSIWDLRQFKSGQPVATFKYHKAPITSIEWHP  357 (440)
T ss_pred             CCccceeE------eeccCCceeeEEccCCcceeeecCCCc------eEEEEEhhhccCCCcceeEEeccCCeeEEEecc
Confidence            83222211      134566899999999988666655543      899999885   467788889999999999999


Q ss_pred             CC-CEEEEEeCCC-EEEEEcCCC
Q psy7108         262 TG-QAWVAATTEG-VHIYSLDSG  282 (703)
Q Consensus       262 dg-~~l~s~s~Dg-v~iwd~~~~  282 (703)
                      .. ..|++++.|. |.+||+...
T Consensus       358 ~e~s~iaasg~D~QitiWDlsvE  380 (440)
T KOG0302|consen  358 HEDSVIAASGEDNQITIWDLSVE  380 (440)
T ss_pred             ccCceEEeccCCCcEEEEEeecc
Confidence            65 4567777777 999998653

>KOG2048|consensus

Probab=99.69  E-value=6.1e-15  Score=156.07  Aligned_cols=236  Identities=13%  Similarity=0.188  Sum_probs=186.8

Q ss_pred             CCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEec--CCCcEEEEEEecCCCEEEEEECCCeEEEEEcCC
Q psy7108          45 GHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQ--LLSDALCVAYKPDGTEIVVATLDGQLIMFDVES  122 (703)
Q Consensus        45 gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~--~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~  122 (703)
                      --..+|.+++++.  +.+.||.+-.||.|.+|++...-....++.  ....|.+++|++ +..|.+.+.+|.|.-||+.+
T Consensus        23 ~~Ps~I~slA~s~--kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e-~~RLFS~g~sg~i~EwDl~~   99 (691)
T KOG2048|consen   23 YKPSEIVSLAYSH--KSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWAE-GGRLFSSGLSGSITEWDLHT   99 (691)
T ss_pred             eeccceEEEEEec--cCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEcc-CCeEEeecCCceEEEEeccc
Confidence            3467899999999  888899999999999999988755444433  456799999994 55688888999999999999


Q ss_pred             CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccc
Q psy7108         123 AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGI  202 (703)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~  202 (703)
                      +++...++...                    +.|++++.+|.+..++.|+.||.+..++...++......      +...
T Consensus       100 lk~~~~~d~~g--------------------g~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~------l~rq  153 (691)
T KOG2048|consen  100 LKQKYNIDSNG--------------------GAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRS------LMRQ  153 (691)
T ss_pred             CceeEEecCCC--------------------cceeEEEeCCccceEEeecCCceEEEEecCCceEEEEee------cccc
Confidence            99988777654                    389999999999999999999988888877766543322      1122


Q ss_pred             cccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeec-------C-CccceEEEEEcCCCCEEEEEeCCC-
Q psy7108         203 NDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL-------K-PEVRVFCVKFSPTGQAWVAATTEG-  273 (703)
Q Consensus       203 ~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~-------~-h~~~V~~l~~spdg~~l~s~s~Dg-  273 (703)
                      ++.+.+++|+|++..++.++.+|      .|++||..+++......       . ...-|+++.|-.|+ .+++|..-| 
T Consensus       154 ~sRvLslsw~~~~~~i~~Gs~Dg------~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~-tI~sgDS~G~  226 (691)
T KOG2048|consen  154 KSRVLSLSWNPTGTKIAGGSIDG------VIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDS-TIASGDSAGT  226 (691)
T ss_pred             cceEEEEEecCCccEEEecccCc------eEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeecC-cEEEecCCce
Confidence            45899999999999999988875      89999999987665221       1 23458999888665 688999999 


Q ss_pred             EEEEEcCCCceecce------eeeEEEccchhhhHhhcCCcceEEEEEEecC
Q psy7108         274 VHIYSLDSGYVFDPF------LLDISITPQSVKEALADKDYAKALMMSLKLN  319 (703)
Q Consensus       274 v~iwd~~~~~~~~~~------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~  319 (703)
                      |.+||-..+...+.+      +++++.++++  ..+.+++.|+.+.. +.+.
T Consensus       227 V~FWd~~~gTLiqS~~~h~adVl~Lav~~~~--d~vfsaGvd~~ii~-~~~~  275 (691)
T KOG2048|consen  227 VTFWDSIFGTLIQSHSCHDADVLALAVADNE--DRVFSAGVDPKIIQ-YSLT  275 (691)
T ss_pred             EEEEcccCcchhhhhhhhhcceeEEEEcCCC--CeEEEccCCCceEE-EEec
Confidence            999999988876555      3678888887  67777888887776 5544

>KOG0307|consensus

Probab=99.69  E-value=9.7e-17  Score=179.04  Aligned_cols=242  Identities=9%  Similarity=0.171  Sum_probs=185.4

Q ss_pred             CcCeEEEEEcCCCCCCE----EEEEeCCCcEEEEEcCC---Cc---eeEEEecCCCcEEEEEEecCCC-EEEEEECCCeE
Q psy7108          47 EGPVSCIEFSPVLSSTG----MVSASWDKTVKLWNAVE---TD---TQHETIQLLSDALCVAYKPDGT-EIVVATLDGQL  115 (703)
Q Consensus        47 ~~~V~~l~~sp~~dg~~----L~sgs~Dg~V~iWd~~~---~~---~~~~~~~~~~~V~~v~~spdg~-~las~s~dg~I  115 (703)
                      ...-+.++|.+  .|..    ||.|..||.|.+||...   +.   .+.+...|++.|..+.|++... .||+|+.||.|
T Consensus        64 ~~rF~kL~W~~--~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI  141 (1049)
T KOG0307|consen   64 SNRFNKLAWGS--YGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEI  141 (1049)
T ss_pred             cccceeeeecc--cCCCccceeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcE
Confidence            45788999999  5554    89999999999999865   21   1234456999999999999775 99999999999


Q ss_pred             EEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCC-CEEEEEecCCcEEEEECCCCceEEEEEec
Q psy7108         116 IMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADG-SCILAAGQSKYICIYSSREGILLKKFTIT  194 (703)
Q Consensus       116 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg-~~l~s~s~dg~I~lwD~~~~~~~~~~~~~  194 (703)
                      .|||+...+...+....                  .....|.+++|+..- ..|++++.+|.+.|||++..+.+-.+..+
T Consensus       142 ~iWDlnn~~tP~~~~~~------------------~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~  203 (1049)
T KOG0307|consen  142 LIWDLNKPETPFTPGSQ------------------APPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDT  203 (1049)
T ss_pred             EEeccCCcCCCCCCCCC------------------CCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccC
Confidence            99999875433222111                  113479999999854 55677888899999999998877766644


Q ss_pred             cCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC-ccceeecCCccceEEEEEcCCC-CEEEEEeCC
Q psy7108         195 QNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG-DMAARVLKPEVRVFCVKFSPTG-QAWVAATTE  272 (703)
Q Consensus       195 ~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~-~~~~~~~~h~~~V~~l~~spdg-~~l~s~s~D  272 (703)
                      .++      ..+..+.|+|+...-++.++++  +..-.|.+||++.. .+.+.+.+|+..|.++.|++.+ ++|++++.|
T Consensus       204 ~~~------~~~S~l~WhP~~aTql~~As~d--d~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD  275 (1049)
T KOG0307|consen  204 PGR------MHCSVLAWHPDHATQLLVASGD--DSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKD  275 (1049)
T ss_pred             CCc------cceeeeeeCCCCceeeeeecCC--CCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhhcccCC
Confidence            442      3578899999987555444442  23358999999865 4566777999999999999977 778999999


Q ss_pred             C-EEEEEcCCCceeccee------eeEEEccchhhhHhhcCCcceEEEEEEec
Q psy7108         273 G-VHIYSLDSGYVFDPFL------LDISITPQSVKEALADKDYAKALMMSLKL  318 (703)
Q Consensus       273 g-v~iwd~~~~~~~~~~~------~~~~~spd~~~~~l~sg~~~~~l~la~~l  318 (703)
                      + +.+|+.++++.+..+.      .++.|.|..- ..++..++++.+.+ ..+
T Consensus       276 ~~ii~wN~~tgEvl~~~p~~~nW~fdv~w~pr~P-~~~A~asfdgkI~I-~sl  326 (1049)
T KOG0307|consen  276 NRIICWNPNTGEVLGELPAQGNWCFDVQWCPRNP-SVMAAASFDGKISI-YSL  326 (1049)
T ss_pred             CCeeEecCCCceEeeecCCCCcceeeeeecCCCc-chhhhheeccceee-eee
Confidence            9 9999999999877664      5789998762 36778888888877 443

>KOG1273|consensus

Probab=99.69  E-value=1.6e-15  Score=146.65  Aligned_cols=242  Identities=15%  Similarity=0.203  Sum_probs=174.5

Q ss_pred             EeeecccCCceEEecCC--ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEE
Q psy7108          11 ETRETHEGGNVVLKLPG--VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHET   87 (703)
Q Consensus        11 ~~~~~~~~~~~~i~~~~--v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~   87 (703)
                      ...|...|....+.+.+  +-+|| .|-..-  +++.+|..+|++++||+  ||.+|+|+|.|..+.+||+..+....++
T Consensus        28 ~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~ia--r~lsaH~~pi~sl~WS~--dgr~LltsS~D~si~lwDl~~gs~l~ri  103 (405)
T KOG1273|consen   28 CCQFSRWGDYLAVGCANGRVVIYDFDTFRIA--RMLSAHVRPITSLCWSR--DGRKLLTSSRDWSIKLWDLLKGSPLKRI  103 (405)
T ss_pred             eEEeccCcceeeeeccCCcEEEEEccccchh--hhhhccccceeEEEecC--CCCEeeeecCCceeEEEeccCCCceeEE
Confidence            34455566666666555  55677 455555  89999999999999999  9999999999999999999877533322


Q ss_pred             ecCCCcEE-----------------------------------------------EEEEecCCCEEEEEECCCeEEEEEc
Q psy7108          88 IQLLSDAL-----------------------------------------------CVAYKPDGTEIVVATLDGQLIMFDV  120 (703)
Q Consensus        88 ~~~~~~V~-----------------------------------------------~v~~spdg~~las~s~dg~I~vwd~  120 (703)
                       ...++|.                                               +..|.+.|+++++|...|.+.++|.
T Consensus       104 -rf~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a  182 (405)
T KOG1273|consen  104 -RFDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDA  182 (405)
T ss_pred             -EccCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCCCCEEEEecCcceEEEEec
Confidence             1111111                                               2235566888899988999999999


Q ss_pred             CCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceE-EEEEeccCCcc
Q psy7108         121 ESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILL-KKFTITQNKSL  199 (703)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~-~~~~~~~~~~~  199 (703)
                      .+.+++..++-..                   ...|..+.++..|+.|+.-+.|..|+.|+++.-... +.-.......+
T Consensus       183 ~t~e~vas~rits-------------------~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~  243 (405)
T KOG1273|consen  183 ETLECVASFRITS-------------------VQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKL  243 (405)
T ss_pred             chheeeeeeeech-------------------heeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhHHH
Confidence            9888887776543                   126889999999999999999999999998731100 00000000000


Q ss_pred             cc--ccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCc-cceEEEEEcCCCCEEEEEeCCCEEE
Q psy7108         200 DG--INDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPE-VRVFCVKFSPTGQAWVAATTEGVHI  276 (703)
Q Consensus       200 ~~--~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~-~~V~~l~~spdg~~l~s~s~Dgv~i  276 (703)
                      ..  ....-.+++||.+|.++.+++...     ..+++|....|..+..+.+.. .....+.|+|-...+++...+.++|
T Consensus       244 qDvVNk~~Wk~ccfs~dgeYv~a~s~~a-----HaLYIWE~~~GsLVKILhG~kgE~l~DV~whp~rp~i~si~sg~v~i  318 (405)
T KOG1273|consen  244 QDVVNKLQWKKCCFSGDGEYVCAGSARA-----HALYIWEKSIGSLVKILHGTKGEELLDVNWHPVRPIIASIASGVVYI  318 (405)
T ss_pred             HHHHhhhhhhheeecCCccEEEeccccc-----eeEEEEecCCcceeeeecCCchhheeecccccceeeeeeccCCceEE
Confidence            00  012345789999999998877543     689999999999999988877 5678899999988888885444999


Q ss_pred             EEcCC
Q psy7108         277 YSLDS  281 (703)
Q Consensus       277 wd~~~  281 (703)
                      |....
T Consensus       319 w~~~~  323 (405)
T KOG1273|consen  319 WAVVQ  323 (405)
T ss_pred             EEeec
Confidence            98754

>KOG0642|consensus

Probab=99.68  E-value=6.7e-16  Score=160.23  Aligned_cols=226  Identities=16%  Similarity=0.269  Sum_probs=169.7

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCC--------ceeEEEecCCCcEEEEEEecCCCEEEEEECC
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVET--------DTQHETIQLLSDALCVAYKPDGTEIVVATLD  112 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~--------~~~~~~~~~~~~V~~v~~spdg~~las~s~d  112 (703)
                      .++..|.+.|+.++|.|  ....|++|+.||++++|+++..        +.+..+.+|.++|.|+++.+++..+++|+.|
T Consensus       288 ~tl~s~~d~ir~l~~~~--sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~D  365 (577)
T KOG0642|consen  288 FTLRSHDDCIRALAFHP--SEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGID  365 (577)
T ss_pred             eeeecchhhhhhhhcCC--CCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccC
Confidence            46778999999999999  8999999999999999999321        1456677899999999999999999999999


Q ss_pred             CeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEE
Q psy7108         113 GQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFT  192 (703)
Q Consensus       113 g~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~  192 (703)
                      |+|+.|++....-  ....+        ..........+|.+.|+.+++|+....|++++.||++++|+...... .+|.
T Consensus       366 g~I~~w~~p~n~d--p~ds~--------dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~-~~f~  434 (577)
T KOG0642|consen  366 GTIRCWNLPPNQD--PDDSY--------DPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP-CTFG  434 (577)
T ss_pred             ceeeeeccCCCCC--ccccc--------CcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCc-cccC
Confidence            9999997752110  00000        01111222344566999999999999999999999999999865444 2221


Q ss_pred             eccC------------------------------------------Ccc--ccccccceeeeeccCCCEEEEEcccCCCC
Q psy7108         193 ITQN------------------------------------------KSL--DGINDFINRRKMTEFGNVSLIETRETHEG  228 (703)
Q Consensus       193 ~~~~------------------------------------------~~~--~~~~~~v~~~~~spdg~~l~~~~~~~~~~  228 (703)
                      ....                                          ...  ......++.+...|.+...+.+..+    
T Consensus       435 ~~~e~g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed----  510 (577)
T KOG0642|consen  435 EPKEHGYPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHED----  510 (577)
T ss_pred             CccccCCcceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccC----
Confidence            1100                                          000  0111345566677777655554433    


Q ss_pred             CeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCcee
Q psy7108         229 GNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVF  285 (703)
Q Consensus       229 ~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~  285 (703)
                        +.|+++|..+++.+.....|...++++++.|+|-+|++++.|+ +++|.++...+.
T Consensus       511 --~~Ir~~dn~~~~~l~s~~a~~~svtslai~~ng~~l~s~s~d~sv~l~kld~k~~~  566 (577)
T KOG0642|consen  511 --RSIRFFDNKTGKILHSMVAHKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDVKTCV  566 (577)
T ss_pred             --CceecccccccccchheeeccceecceeecCCCceEEeecCCceeehhhccchhee
Confidence              5899999999999999999999999999999999999999999 999998765543

>KOG0307|consensus

Probab=99.68  E-value=3.8e-16  Score=174.39  Aligned_cols=234  Identities=17%  Similarity=0.232  Sum_probs=178.9

Q ss_pred             ccCCceEEecCCceee--ccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEE--ecCC
Q psy7108          16 HEGGNVVLKLPGVKKG--DMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHET--IQLL   91 (703)
Q Consensus        16 ~~~~~~~i~~~~v~~~--d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~--~~~~   91 (703)
                      -...++-|.+|+....  +..-..+  .+...|++.|..+.|++. .+++||+|+.||.|.|||+...+.....  ....
T Consensus        85 GG~edG~I~ly~p~~~~~~~~~~~l--a~~~~h~G~V~gLDfN~~-q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~  161 (1049)
T KOG0307|consen   85 GGLEDGNIVLYDPASIIANASEEVL--ATKSKHTGPVLGLDFNPF-QGNLLASGADDGEILIWDLNKPETPFTPGSQAPP  161 (1049)
T ss_pred             ccccCCceEEecchhhccCcchHHH--hhhcccCCceeeeecccc-CCceeeccCCCCcEEEeccCCcCCCCCCCCCCCc
Confidence            3444555677776543  3344566  788899999999999995 5669999999999999999875543333  2256


Q ss_pred             CcEEEEEEecCC-CEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCC-CEEE
Q psy7108          92 SDALCVAYKPDG-TEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADG-SCIL  169 (703)
Q Consensus        92 ~~V~~v~~spdg-~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg-~~l~  169 (703)
                      +.|.+++|+..- ..|++++.+|.+.|||++..+.+-.+..+..                  ...+..++|+|++ ..++
T Consensus       162 ~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~------------------~~~~S~l~WhP~~aTql~  223 (1049)
T KOG0307|consen  162 SEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPG------------------RMHCSVLAWHPDHATQLL  223 (1049)
T ss_pred             ccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccCCC------------------ccceeeeeeCCCCceeee
Confidence            789999998754 4678889999999999998877666554432                  1258899999976 4566


Q ss_pred             EEecCC---cEEEEECCCC-ceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccce
Q psy7108         170 AAGQSK---YICIYSSREG-ILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAA  245 (703)
Q Consensus       170 s~s~dg---~I~lwD~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~  245 (703)
                      +++.|.   .|.+||+|.- .++++++        +|...|.++.|++.+..+++++..+     ..+.+|+..+++.+.
T Consensus       224 ~As~dd~~PviqlWDlR~assP~k~~~--------~H~~GilslsWc~~D~~lllSsgkD-----~~ii~wN~~tgEvl~  290 (1049)
T KOG0307|consen  224 VASGDDSAPVIQLWDLRFASSPLKILE--------GHQRGILSLSWCPQDPRLLLSSGKD-----NRIICWNPNTGEVLG  290 (1049)
T ss_pred             eecCCCCCceeEeecccccCCchhhhc--------ccccceeeeccCCCCchhhhcccCC-----CCeeEecCCCceEee
Confidence            666554   5999999863 3455554        4555899999999986555555432     479999999999999


Q ss_pred             eecCCccceEEEEEcCCCC-EEEEEeCCC-EEEEEcCCCc
Q psy7108         246 RVLKPEVRVFCVKFSPTGQ-AWVAATTEG-VHIYSLDSGY  283 (703)
Q Consensus       246 ~~~~h~~~V~~l~~spdg~-~l~s~s~Dg-v~iwd~~~~~  283 (703)
                      .+......+..+.|+|... .+++++-|| |-||.+.++.
T Consensus       291 ~~p~~~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~~~~  330 (1049)
T KOG0307|consen  291 ELPAQGNWCFDVQWCPRNPSVMAAASFDGKISIYSLQGTD  330 (1049)
T ss_pred             ecCCCCcceeeeeecCCCcchhhhheeccceeeeeeecCC
Confidence            9988888999999999876 678889999 9999987654

>KOG0270|consensus

Probab=99.67  E-value=1.3e-15  Score=153.76  Aligned_cols=231  Identities=10%  Similarity=0.145  Sum_probs=169.5

Q ss_pred             CCCEEEEEeCCCcEEEEEcCCCcee--EE-------------------EecCCCcEEEEEEecCC-CEEEEEECCCeEEE
Q psy7108          60 SSTGMVSASWDKTVKLWNAVETDTQ--HE-------------------TIQLLSDALCVAYKPDG-TEIVVATLDGQLIM  117 (703)
Q Consensus        60 dg~~L~sgs~Dg~V~iWd~~~~~~~--~~-------------------~~~~~~~V~~v~~spdg-~~las~s~dg~I~v  117 (703)
                      .|+++|.|..|..|.|||+.-...+  ..                   ...|+..|.+++|...- ..||+||.|.+|++
T Consensus       191 ~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~l  270 (463)
T KOG0270|consen  191 AGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKL  270 (463)
T ss_pred             CcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEEE
Confidence            3789999999999999998532211  00                   11377778888888765 57899999999999


Q ss_pred             EEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC-CCCEEEEEecCCcEEEEECCCCc-eEEEEEecc
Q psy7108         118 FDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA-DGSCILAAGQSKYICIYSSREGI-LLKKFTITQ  195 (703)
Q Consensus       118 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp-dg~~l~s~s~dg~I~lwD~~~~~-~~~~~~~~~  195 (703)
                      ||+.++++..++..|..                    .|.++.|+| ....|++|+.|+++.+.|.|... .-..+.   
T Consensus       271 WD~~~g~p~~s~~~~~k--------------------~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk---  327 (463)
T KOG0270|consen  271 WDVDTGKPKSSITHHGK--------------------KVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWK---  327 (463)
T ss_pred             EEcCCCCcceehhhcCC--------------------ceeEEEecCCCceEEEeccccceEEeeeccCccccCceEE---
Confidence            99999999999886644                    899999999 46889999999999999999522 112222   


Q ss_pred             CCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC-ccceeecCCccceEEEEEcCCCC-EEEEEeCCC
Q psy7108         196 NKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG-DMAARVLKPEVRVFCVKFSPTGQ-AWVAATTEG  273 (703)
Q Consensus       196 ~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~-~~~~~~~~h~~~V~~l~~spdg~-~l~s~s~Dg  273 (703)
                            ..+.|..++|.|.....+..+.++     +.++-+|++.. +++..+..|++.|.++++++.-. ++++++.|+
T Consensus       328 ------~~g~VEkv~w~~~se~~f~~~tdd-----G~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~  396 (463)
T KOG0270|consen  328 ------FDGEVEKVAWDPHSENSFFVSTDD-----GTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDK  396 (463)
T ss_pred             ------eccceEEEEecCCCceeEEEecCC-----ceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeeccccc
Confidence                  123788899999988777666543     48999999965 88999999999999999988654 578999999


Q ss_pred             -EEEEEcCCCcee----ccee----eeEEEccchhhhHhhcCCcceEEEEEEecCchhHHHH
Q psy7108         274 -VHIYSLDSGYVF----DPFL----LDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIH  326 (703)
Q Consensus       274 -v~iwd~~~~~~~----~~~~----~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~~~~~~  326 (703)
                       |++|++.....-    ..+.    .+.++.|+. .-.++.|+..+.+++ |++-...-+.+
T Consensus       397 ~Vklw~~~~~~~~~v~~~~~~~~rl~c~~~~~~~-a~~la~GG~k~~~~v-wd~~~~~~V~k  456 (463)
T KOG0270|consen  397 VVKLWKFDVDSPKSVKEHSFKLGRLHCFALDPDV-AFTLAFGGEKAVLRV-WDIFTNSPVRK  456 (463)
T ss_pred             eEEEEeecCCCCcccccccccccceeecccCCCc-ceEEEecCccceEEE-eecccChhHHH
Confidence             999998765441    1111    233444543 124566666665665 77665544443

>KOG2445|consensus

Probab=99.67  E-value=6.9e-15  Score=142.13  Aligned_cols=248  Identities=15%  Similarity=0.236  Sum_probs=173.0

Q ss_pred             eecccCCceEEecCCceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc---------e
Q psy7108          13 RETHEGGNVVLKLPGVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD---------T   83 (703)
Q Consensus        13 ~~~~~~~~~~i~~~~v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~---------~   83 (703)
                      +.+.++.+..+++|+.+.-+.+-.+.  ...+.|.+.|..+.|.+.+-|+.+|+||.|++++||.-....         .
T Consensus        27 RmAtCSsDq~vkI~d~~~~s~~W~~T--s~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE~~~~~~~~~~~Wv~  104 (361)
T KOG2445|consen   27 RMATCSSDQTVKIWDSTSDSGTWSCT--SSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEEQEKSEEAHGRRWVR  104 (361)
T ss_pred             eeeeccCCCcEEEEeccCCCCceEEe--eeEEecCCcEEEEEecCccccceEEEEecCCceeeeeecccccccccceeEE
Confidence            44556677777777754433444555  677899999999999875569999999999999999752111         1


Q ss_pred             eEEEecCCCcEEEEEEecC--CCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEE
Q psy7108          84 QHETIQLLSDALCVAYKPD--GTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCY  161 (703)
Q Consensus        84 ~~~~~~~~~~V~~v~~spd--g~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~  161 (703)
                      ...+....+.|+++.|.|.  |-.+|+++.||.++||+.-..-.+....-...+.       ....+...+..+..|+.|
T Consensus       105 ~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~-------~~~~pp~~~~~~~~CvsW  177 (361)
T KOG2445|consen  105 RTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQ-------NVIDPPGKNKQPCFCVSW  177 (361)
T ss_pred             EEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhh-------hccCCcccccCcceEEee
Confidence            2334457789999999995  5689999999999999886554443332222110       011122234457789999


Q ss_pred             cCC---CCEEEEEecC-----CcEEEEECCCCc--eEEEEEeccCCccccccccceeeeeccCC----CEEEEEcccCCC
Q psy7108         162 SAD---GSCILAAGQS-----KYICIYSSREGI--LLKKFTITQNKSLDGINDFINRRKMTEFG----NVSLIETRETHE  227 (703)
Q Consensus       162 spd---g~~l~s~s~d-----g~I~lwD~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~spdg----~~l~~~~~~~~~  227 (703)
                      +|.   ..+|++|+.+     +.++||....+.  ..+.      ..+.++.++|+.++|.|.-    ..+++++.+|  
T Consensus       178 n~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kv------a~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kDg--  249 (361)
T KOG2445|consen  178 NPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKV------AELPDHTDPIRDISWAPNIGRSYHLLAVATKDG--  249 (361)
T ss_pred             ccccccCceEEEEcccCCccccceEEEEecCCcceeeee------hhcCCCCCcceeeeeccccCCceeeEEEeecCc--
Confidence            984   4667877765     478888765432  2221      2244677899999999973    2456666553  


Q ss_pred             CCeeEEECCCCCCC--------------------ccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCC
Q psy7108         228 GGNVVLKLPGVKKG--------------------DMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSG  282 (703)
Q Consensus       228 ~~~~~i~iwd~~~~--------------------~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~  282 (703)
                           |+||.++..                    +.+..+.+|++.|+.+.|+-.|..|++.+.|| |++|...-.
T Consensus       250 -----v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWkany~  320 (361)
T KOG2445|consen  250 -----VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKANYN  320 (361)
T ss_pred             -----EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEeecCCCceeeehhhhhh
Confidence                 788876631                    12344668999999999999999999999999 999986543

>KOG2919|consensus

Probab=99.66  E-value=5e-15  Score=143.82  Aligned_cols=244  Identities=14%  Similarity=0.148  Sum_probs=175.5

Q ss_pred             eEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc-------------eeEEEecCCCcEEEEEEe-------cCCCEEEEE
Q psy7108          50 VSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD-------------TQHETIQLLSDALCVAYK-------PDGTEIVVA  109 (703)
Q Consensus        50 V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~-------------~~~~~~~~~~~V~~v~~s-------pdg~~las~  109 (703)
                      ...+.|+|  ||..|++-+.|..+++|++....             ...........|...+|-       |+..++++.
T Consensus        52 ~kgckWSP--DGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~s  129 (406)
T KOG2919|consen   52 LKGCKWSP--DGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVS  129 (406)
T ss_pred             hccceeCC--CCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeec
Confidence            45679999  99999999999999999985321             011111244567888885       677899999


Q ss_pred             ECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEEC-CCCceE
Q psy7108         110 TLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSS-REGILL  188 (703)
Q Consensus       110 s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~-~~~~~~  188 (703)
                      +.+.-|++||.-+|+...++.+-.....               -....+++|+|||.+|++|- .++|+++|+ +.|.-.
T Consensus       130 sr~~PIh~wdaftG~lraSy~~ydh~de---------------~taAhsL~Fs~DGeqlfaGy-krcirvFdt~RpGr~c  193 (406)
T KOG2919|consen  130 SRDQPIHLWDAFTGKLRASYRAYDHQDE---------------YTAAHSLQFSPDGEQLFAGY-KRCIRVFDTSRPGRDC  193 (406)
T ss_pred             cccCceeeeeccccccccchhhhhhHHh---------------hhhheeEEecCCCCeEeecc-cceEEEeeccCCCCCC
Confidence            9999999999999998877765432110               01356899999999998765 478999999 555432


Q ss_pred             EEEEeccCCccccccccceeeeeccCCC-EEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEE
Q psy7108         189 KKFTITQNKSLDGINDFINRRKMTEFGN-VSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWV  267 (703)
Q Consensus       189 ~~~~~~~~~~~~~~~~~v~~~~~spdg~-~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~  267 (703)
                      ..+..-.. ...+....+.+++|+|... .+++++..      ..+-|+.-....++..+.+|.+.|+.+.|.++|+.|.
T Consensus       194 ~vy~t~~~-~k~gq~giisc~a~sP~~~~~~a~gsY~------q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lf  266 (406)
T KOG2919|consen  194 PVYTTVTK-GKFGQKGIISCFAFSPMDSKTLAVGSYG------QRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLF  266 (406)
T ss_pred             cchhhhhc-ccccccceeeeeeccCCCCcceeeeccc------ceeeeEecCCCCceeeecccCCCeeeEEeccCcCeec
Confidence            22211110 0123345788999999876 55555543      3566666667788888999999999999999999999


Q ss_pred             EEeCCC--EEEEEcCCCce-ecc-------eeee--EEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108         268 AATTEG--VHIYSLDSGYV-FDP-------FLLD--ISITPQSVKEALADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       268 s~s~Dg--v~iwd~~~~~~-~~~-------~~~~--~~~spd~~~~~l~sg~~~~~l~la~~l~~~  321 (703)
                      +|+...  |..||++.... +-.       ....  ....|++  +.|++|+.++.+++ |++..+
T Consensus       267 sGaRk~dkIl~WDiR~~~~pv~~L~rhv~~TNQRI~FDld~~~--~~LasG~tdG~V~v-wdlk~~  329 (406)
T KOG2919|consen  267 SGARKDDKILCWDIRYSRDPVYALERHVGDTNQRILFDLDPKG--EILASGDTDGSVRV-WDLKDL  329 (406)
T ss_pred             ccccCCCeEEEEeehhccchhhhhhhhccCccceEEEecCCCC--ceeeccCCCccEEE-EecCCC
Confidence            998755  99999875432 111       1122  3445777  99999999999999 998763

>PLN02872 triacylglycerol lipase

Probab=99.65  E-value=2.8e-17  Score=175.35  Aligned_cols=116  Identities=28%  Similarity=0.497  Sum_probs=104.8

Q ss_pred             cccCCCcccchhhhhhcccccccceeecccCccccccCcccCcCCccceeeeecccchhhhhhhhcCCcccccccccccC
Q psy7108         406 CQFDDTKFLPPTLFARMRTRGYDIWLWNARGNVYSREHVNLTSEQNKFYRFSCDFNVYTLELISRLGPLRIKPKVEKMET  485 (703)
Q Consensus       406 ~~~n~~~~sl~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  485 (703)
                      |..+.+.+++++++++   +|||||+.|.||+.||+.|.+++..+.+||+|+++                          
T Consensus        90 w~~~~~~~sla~~La~---~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~--------------------------  140 (395)
T PLN02872         90 WFLNSPEQSLGFILAD---HGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQ--------------------------  140 (395)
T ss_pred             eeecCcccchHHHHHh---CCCCcccccccccccccCCCCCCccchhccCCcHH--------------------------
Confidence            4455556889999997   99999999999999999999999999999999998                          


Q ss_pred             CCCCCcCCCcccceeecccCcCCCCCCccccccCchhhhhcccCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCC
Q psy7108         486 GSSDEESSKDDETEIRVLDEDVPRSSDTGDIQLKSTRMNELGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSL  565 (703)
Q Consensus       486 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~  565 (703)
                                                             +++.+|++++++|+++.++ +++.++||||||+++++++ .
T Consensus       141 ---------------------------------------e~a~~Dl~a~id~i~~~~~-~~v~~VGhS~Gg~~~~~~~-~  179 (395)
T PLN02872        141 ---------------------------------------ELALYDLAEMIHYVYSITN-SKIFIVGHSQGTIMSLAAL-T  179 (395)
T ss_pred             ---------------------------------------HHHHHHHHHHHHHHHhccC-CceEEEEECHHHHHHHHHh-h
Confidence                                                   9999999999999998765 7899999999999888766 5


Q ss_pred             CchhhhhHHHhhhhhhhhhcccccch
Q psy7108         566 RPEYQTKVRLNVLWAQSAFLGNLVTK  591 (703)
Q Consensus       566 ~~~~~~~~~~~~~~~p~~~~~~~~~~  591 (703)
                      .|+++++++.+++++|++++.+..++
T Consensus       180 ~p~~~~~v~~~~~l~P~~~~~~~~~~  205 (395)
T PLN02872        180 QPNVVEMVEAAALLCPISYLDHVTAP  205 (395)
T ss_pred             ChHHHHHHHHHHHhcchhhhccCCCH
Confidence            79999999999999999999887764

>KOG0294|consensus

Probab=99.65  E-value=8.1e-15  Score=142.13  Aligned_cols=195  Identities=16%  Similarity=0.211  Sum_probs=153.0

Q ss_pred             EEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCC
Q psy7108          86 ETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADG  165 (703)
Q Consensus        86 ~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg  165 (703)
                      ....|.+.+++++.+  +.++|+|+.|-+|+|||++...++..+-.|.+                    .|+++.|.+.-
T Consensus        38 ~~~aH~~sitavAVs--~~~~aSGssDetI~IYDm~k~~qlg~ll~Hag--------------------sitaL~F~~~~   95 (362)
T KOG0294|consen   38 AFSAHAGSITALAVS--GPYVASGSSDETIHIYDMRKRKQLGILLSHAG--------------------SITALKFYPPL   95 (362)
T ss_pred             cccccccceeEEEec--ceeEeccCCCCcEEEEeccchhhhcceecccc--------------------ceEEEEecCCc
Confidence            344689999999987  89999999999999999999998888887755                    89999999876


Q ss_pred             C--EEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcc
Q psy7108         166 S--CILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDM  243 (703)
Q Consensus       166 ~--~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~  243 (703)
                      .  .|++|+.||.|.+|+.....++.+++.|.+        .|+.++++|.|+..++.+.+      ..+++||+-+|+.
T Consensus        96 S~shLlS~sdDG~i~iw~~~~W~~~~slK~H~~--------~Vt~lsiHPS~KLALsVg~D------~~lr~WNLV~Gr~  161 (362)
T KOG0294|consen   96 SKSHLLSGSDDGHIIIWRVGSWELLKSLKAHKG--------QVTDLSIHPSGKLALSVGGD------QVLRTWNLVRGRV  161 (362)
T ss_pred             chhheeeecCCCcEEEEEcCCeEEeeeeccccc--------ccceeEecCCCceEEEEcCC------ceeeeehhhcCcc
Confidence            5  899999999999999999999999887766        79999999999987776665      4899999998875


Q ss_pred             ceeecCCccceEEEEEcCCCCEEEEEeCCCEEEEEcCCCceecceee---eEEEccchhhhHhhcCCcceEEEEEEecC
Q psy7108         244 AARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYSLDSGYVFDPFLL---DISITPQSVKEALADKDYAKALMMSLKLN  319 (703)
Q Consensus       244 ~~~~~~h~~~V~~l~~spdg~~l~s~s~Dgv~iwd~~~~~~~~~~~~---~~~~spd~~~~~l~sg~~~~~l~la~~l~  319 (703)
                      .....- ....+.+.|+|.|.+++.++.++|-||.+++...+.....   ..+..+.. ...+..|..+..+.+ ++-+
T Consensus       162 a~v~~L-~~~at~v~w~~~Gd~F~v~~~~~i~i~q~d~A~v~~~i~~~~r~l~~~~l~-~~~L~vG~d~~~i~~-~D~d  237 (362)
T KOG0294|consen  162 AFVLNL-KNKATLVSWSPQGDHFVVSGRNKIDIYQLDNASVFREIENPKRILCATFLD-GSELLVGGDNEWISL-KDTD  237 (362)
T ss_pred             ceeecc-CCcceeeEEcCCCCEEEEEeccEEEEEecccHhHhhhhhccccceeeeecC-CceEEEecCCceEEE-eccC
Confidence            443321 1223349999999999999999999999988766544332   12222211 135666666666666 5544

>KOG0321|consensus

Probab=99.65  E-value=3.5e-15  Score=156.65  Aligned_cols=241  Identities=17%  Similarity=0.234  Sum_probs=163.6

Q ss_pred             cCCceEEecCCceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc--------------
Q psy7108          17 EGGNVVLKLPGVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD--------------   82 (703)
Q Consensus        17 ~~~~~~i~~~~v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~--------------   82 (703)
                      ..++-.+++|+++    ++++...+.+.||.+.|.+++|.|. +...+++|+.||.+.|||+.-..              
T Consensus       118 asGDsT~r~Wdvk----~s~l~G~~~~~GH~~SvkS~cf~~~-n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~  192 (720)
T KOG0321|consen  118 ASGDSTIRPWDVK----TSRLVGGRLNLGHTGSVKSECFMPT-NPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGR  192 (720)
T ss_pred             ccCCceeeeeeec----cceeecceeecccccccchhhhccC-CCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhcc
Confidence            3444556666666    5555522347899999999999996 77899999999999999985322              


Q ss_pred             -------------eeEEEecCCCcEEE---EEEecCCCEEEEEEC-CCeEEEEEcCCCcEEEEEeccccCCCCCCCCccc
Q psy7108          83 -------------TQHETIQLLSDALC---VAYKPDGTEIVVATL-DGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLV  145 (703)
Q Consensus        83 -------------~~~~~~~~~~~V~~---v~~spdg~~las~s~-dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (703)
                                   .......+...+.+   +.+..|...||+++. |+.|+|||++............        .+..
T Consensus       193 ~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~--------~~~~  264 (720)
T KOG0321|consen  193 HNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRG--------SDKY  264 (720)
T ss_pred             ccCCCCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCc--------ccCc
Confidence                         00111123344555   566678889999888 9999999998765432221110        0000


Q ss_pred             hhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCc--eEEEEEeccCCccccccccceeeeeccCCCEEEEEcc
Q psy7108         146 TREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGI--LLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETR  223 (703)
Q Consensus       146 ~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~  223 (703)
                      .. .......+.++.....|.+|.+.+.|+.|++||+.+..  ++..+.++...      ..-..-..+||+.+++.++.
T Consensus       265 ~t-~skrs~G~~nL~lDssGt~L~AsCtD~sIy~ynm~s~s~sP~~~~sg~~~~------sf~vks~lSpd~~~l~SgSs  337 (720)
T KOG0321|consen  265 PT-HSKRSVGQVNLILDSSGTYLFASCTDNSIYFYNMRSLSISPVAEFSGKLNS------SFYVKSELSPDDCSLLSGSS  337 (720)
T ss_pred             cC-cccceeeeEEEEecCCCCeEEEEecCCcEEEEeccccCcCchhhccCcccc------eeeeeeecCCCCceEeccCC
Confidence            00 01123367888888889999988889999999998642  22222222110      12223357899999999888


Q ss_pred             cCCCCCeeEEECCCCCCCc-cceeecCCccceEEEEEcCCCC-EEEEEeCCC-EEEEEcCCCc
Q psy7108         224 ETHEGGNVVLKLPGVKKGD-MAARVLKPEVRVFCVKFSPTGQ-AWVAATTEG-VHIYSLDSGY  283 (703)
Q Consensus       224 ~~~~~~~~~i~iwd~~~~~-~~~~~~~h~~~V~~l~~spdg~-~l~s~s~Dg-v~iwd~~~~~  283 (703)
                      +.      ...+|.+.+.+ ....+.+|...|++++|.|... -++++++|- ++||++..+-
T Consensus       338 d~------~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~pS~~t~v~TcSdD~~~kiW~l~~~l  394 (720)
T KOG0321|consen  338 DE------QAYIWVVSSPEAPPALLLGHTREVTTVRWLPSATTPVATCSDDFRVKIWRLSNGL  394 (720)
T ss_pred             Cc------ceeeeeecCccCChhhhhCcceEEEEEeeccccCCCceeeccCcceEEEeccCch
Confidence            74      78899888764 4556778999999999988543 367778888 9999996553

>KOG4328|consensus

Probab=99.65  E-value=3e-15  Score=151.63  Aligned_cols=263  Identities=12%  Similarity=0.114  Sum_probs=179.7

Q ss_pred             CCceEEecCCceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCce--eEEEecCCCcEE
Q psy7108          18 GGNVVLKLPGVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDT--QHETIQLLSDAL   95 (703)
Q Consensus        18 ~~~~~i~~~~v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~--~~~~~~~~~~V~   95 (703)
                      ...+.|.+|++......-.-+  ..+..|.++|+++.|+|. +...+++.|.||+||+-|+++...  +...........
T Consensus       207 dK~G~VG~Wn~~~~~~d~d~v--~~f~~hs~~Vs~l~F~P~-n~s~i~ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs  283 (498)
T KOG4328|consen  207 DKGGQVGLWNFGTQEKDKDGV--YLFTPHSGPVSGLKFSPA-NTSQIYSSSYDGTIRLQDFEGNISEEVLSLDTDNIWFS  283 (498)
T ss_pred             cCCCcEEEEecCCCCCccCce--EEeccCCccccceEecCC-ChhheeeeccCceeeeeeecchhhHHHhhcCccceeee
Confidence            344555667664221112222  457899999999999996 778999999999999999976631  111212334566


Q ss_pred             EEEEecCCCEEEEEECCCeEEEEEcCCCcE-EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC-CCEEEEEec
Q psy7108          96 CVAYKPDGTEIVVATLDGQLIMFDVESAAQ-VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD-GSCILAAGQ  173 (703)
Q Consensus        96 ~v~~spdg~~las~s~dg~I~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd-g~~l~s~s~  173 (703)
                      ++.|+.+...++.+..=|...+||++++.. ...+.-|.                    ..|..++++|- ..+|++++.
T Consensus       284 ~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~--------------------kKI~sv~~NP~~p~~laT~s~  343 (498)
T KOG4328|consen  284 SLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHK--------------------KKITSVALNPVCPWFLATASL  343 (498)
T ss_pred             eccccCCCccEEEeecccceEEEEeecCCccchhhhhhh--------------------cccceeecCCCCchheeeccc
Confidence            788888888888888878999999998754 33344443                    38999999995 467889999


Q ss_pred             CCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC---CC-ccceeecC
Q psy7108         174 SKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK---KG-DMAARVLK  249 (703)
Q Consensus       174 dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~---~~-~~~~~~~~  249 (703)
                      |++.+|||++.-.....    .-...-.|...|.+..|||++-.+++.+.+      ..|++||..   .. ++...+ .
T Consensus       344 D~T~kIWD~R~l~~K~s----p~lst~~HrrsV~sAyFSPs~gtl~TT~~D------~~IRv~dss~~sa~~~p~~~I-~  412 (498)
T KOG4328|consen  344 DQTAKIWDLRQLRGKAS----PFLSTLPHRRSVNSAYFSPSGGTLLTTCQD------NEIRVFDSSCISAKDEPLGTI-P  412 (498)
T ss_pred             CcceeeeehhhhcCCCC----cceecccccceeeeeEEcCCCCceEeeccC------CceEEeecccccccCCcccee-e
Confidence            99999999986433221    001112355689999999999888887776      389999984   22 222222 2


Q ss_pred             Ccc------ceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecc----ee----eeEEEccchhhh-HhhcCCcceEEE
Q psy7108         250 PEV------RVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDP----FL----LDISITPQSVKE-ALADKDYAKALM  313 (703)
Q Consensus       250 h~~------~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~----~~----~~~~~spd~~~~-~l~sg~~~~~l~  313 (703)
                      |..      ......|.|+..++++|..-. |-|+|-..++.+..    ..    .-..++|-+  . +++.+++.+.+.
T Consensus       413 Hn~~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q~v~el~~P~~~tI~~vn~~HP~~--~~~~aG~~s~Gki~  490 (498)
T KOG4328|consen  413 HNNRTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQMVCELHDPESSTIPSVNEFHPMR--DTLAAGGNSSGKIY  490 (498)
T ss_pred             ccCcccccccchhheeCCCccEEEEeccCcceeEEcCCCCEEeeeccCccccccccceeecccc--cceeccCCccceEE
Confidence            321      134568999999999998888 99999988874333    22    225778866  5 445555555555


Q ss_pred             EEEe
Q psy7108         314 MSLK  317 (703)
Q Consensus       314 la~~  317 (703)
                      + |.
T Consensus       491 v-ft  493 (498)
T KOG4328|consen  491 V-FT  493 (498)
T ss_pred             E-Ee
Confidence            4 54

>KOG4378|consensus

Probab=99.64  E-value=5.2e-15  Score=150.79  Aligned_cols=205  Identities=15%  Similarity=0.223  Sum_probs=161.5

Q ss_pred             cCCceEEecCCceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecC-CCcEE
Q psy7108          17 EGGNVVLKLPGVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQL-LSDAL   95 (703)
Q Consensus        17 ~~~~~~i~~~~v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~-~~~V~   95 (703)
                      .|-..++++|+.+    ...+.  +.+.+|.+.|+++.++-  ...+||+++..|.|.|..+.++.....+... ...|.
T Consensus        97 gG~~~~Vkiwdl~----~kl~h--r~lkdh~stvt~v~YN~--~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sgqsvR  168 (673)
T KOG4378|consen   97 GGQSGCVKIWDLR----AKLIH--RFLKDHQSTVTYVDYNN--TDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQSVR  168 (673)
T ss_pred             cCcCceeeehhhH----HHHHh--hhccCCcceeEEEEecC--CcceeEEeccCCcEEEEecccCccccceecCCCCeEE
Confidence            4445566666555    33445  78899999999999998  8899999999999999999888655544443 34566


Q ss_pred             EEEEecCCC-EEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCC-CEEEEEec
Q psy7108          96 CVAYKPDGT-EIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADG-SCILAAGQ  173 (703)
Q Consensus        96 ~v~~spdg~-~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg-~~l~s~s~  173 (703)
                      -+.|+|..+ +|.+++.+|.|.+||+....+...+..                   .|..+...|||+|.. ..|++.+.
T Consensus       169 ll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~-------------------~HsAP~~gicfspsne~l~vsVG~  229 (673)
T KOG4378|consen  169 LLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASE-------------------AHSAPCRGICFSPSNEALLVSVGY  229 (673)
T ss_pred             EeecccccceeeEeeccCCeEEEEeccCCCcccchhh-------------------hccCCcCcceecCCccceEEEecc
Confidence            899999876 457789999999999987665543322                   244578899999954 66778899


Q ss_pred             CCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC-ccceeecCCcc
Q psy7108         174 SKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG-DMAARVLKPEV  252 (703)
Q Consensus       174 dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~-~~~~~~~~h~~  252 (703)
                      |+.|.+||.+.......+...         .+...++|+++|.+++++.+.|      .|..||++.. .++.....|+.
T Consensus       230 Dkki~~yD~~s~~s~~~l~y~---------~Plstvaf~~~G~~L~aG~s~G------~~i~YD~R~~k~Pv~v~sah~~  294 (673)
T KOG4378|consen  230 DKKINIYDIRSQASTDRLTYS---------HPLSTVAFSECGTYLCAGNSKG------ELIAYDMRSTKAPVAVRSAHDA  294 (673)
T ss_pred             cceEEEeecccccccceeeec---------CCcceeeecCCceEEEeecCCc------eEEEEecccCCCCceEeeeccc
Confidence            999999999987766665522         3778999999999999988875      7999999854 67778888999


Q ss_pred             ceEEEEEcCCC
Q psy7108         253 RVFCVKFSPTG  263 (703)
Q Consensus       253 ~V~~l~~spdg  263 (703)
                      .|++++|-|.-
T Consensus       295 sVt~vafq~s~  305 (673)
T KOG4378|consen  295 SVTRVAFQPSP  305 (673)
T ss_pred             ceeEEEeeecc
Confidence            99999998765

>KOG4378|consensus

Probab=99.64  E-value=3.9e-15  Score=151.72  Aligned_cols=242  Identities=14%  Similarity=0.209  Sum_probs=179.9

Q ss_pred             cccCCceEEecCCceeeccCCC---ccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCC
Q psy7108          15 THEGGNVVLKLPGVKKGDMAAR---VLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLL   91 (703)
Q Consensus        15 ~~~~~~~~i~~~~v~~~d~tg~---~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~   91 (703)
                      +..+++.++++|     .+.|+   ....+.+.|.  .-.|++...  ...++++|+..++|+|||++..-..+.+..|.
T Consensus        51 as~~gdk~~~~~-----~K~g~~~~Vp~~~k~~gd--~~~Cv~~~s--~S~y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~  121 (673)
T KOG4378|consen   51 ASMAGDKVMRIK-----EKDGKTPEVPRVRKLTGD--NAFCVACAS--QSLYEISGGQSGCVKIWDLRAKLIHRFLKDHQ  121 (673)
T ss_pred             eecCCceeEEEe-----cccCCCCccceeeccccc--hHHHHhhhh--cceeeeccCcCceeeehhhHHHHHhhhccCCc
Confidence            344555556555     44444   2211333443  445565555  56799999999999999998665667777899


Q ss_pred             CcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEE-E
Q psy7108          92 SDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCIL-A  170 (703)
Q Consensus        92 ~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~-s  170 (703)
                      +.|+++.+.-...+||+++..|.|.|-.+.++.....+....                   +..|.-+.|+|..++++ +
T Consensus       122 stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~s-------------------gqsvRll~ys~skr~lL~~  182 (673)
T KOG4378|consen  122 STVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDS-------------------GQSVRLLRYSPSKRFLLSI  182 (673)
T ss_pred             ceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCC-------------------CCeEEEeecccccceeeEe
Confidence            999999999999999999999999999999887776665542                   23677899999877655 5


Q ss_pred             EecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCC
Q psy7108         171 AGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKP  250 (703)
Q Consensus       171 ~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h  250 (703)
                      ++.+|.|.+||+....+...+.       ..|..+...++|+|....++++-+.+     +.|.+||.+.......+. .
T Consensus       183 asd~G~VtlwDv~g~sp~~~~~-------~~HsAP~~gicfspsne~l~vsVG~D-----kki~~yD~~s~~s~~~l~-y  249 (673)
T KOG4378|consen  183 ASDKGAVTLWDVQGMSPIFHAS-------EAHSAPCRGICFSPSNEALLVSVGYD-----KKINIYDIRSQASTDRLT-Y  249 (673)
T ss_pred             eccCCeEEEEeccCCCcccchh-------hhccCCcCcceecCCccceEEEeccc-----ceEEEeecccccccceee-e
Confidence            7889999999998776655442       34556888899999998887766543     689999998665444333 3


Q ss_pred             ccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCce-------ecceeeeEEEccc
Q psy7108         251 EVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYV-------FDPFLLDISITPQ  297 (703)
Q Consensus       251 ~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~-------~~~~~~~~~~spd  297 (703)
                      +.+...++|+++|.+|+.|+..| |..||+.....       +..-+.+++|-|.
T Consensus       250 ~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~Pv~v~sah~~sVt~vafq~s  304 (673)
T KOG4378|consen  250 SHPLSTVAFSECGTYLCAGNSKGELIAYDMRSTKAPVAVRSAHDASVTRVAFQPS  304 (673)
T ss_pred             cCCcceeeecCCceEEEeecCCceEEEEecccCCCCceEeeecccceeEEEeeec
Confidence            55788999999999999999999 99999986543       2223456677654

>KOG2106|consensus

Probab=99.64  E-value=4e-14  Score=144.92  Aligned_cols=235  Identities=18%  Similarity=0.228  Sum_probs=173.4

Q ss_pred             cccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcC
Q psy7108          42 VLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVE  121 (703)
Q Consensus        42 ~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~  121 (703)
                      +..+|.+....++.+|  +.++++||+.|+.+++|+   ..++........++.|+.|+|.| .+|.|+..|...+.|.+
T Consensus       363 ~v~gh~delwgla~hp--s~~q~~T~gqdk~v~lW~---~~k~~wt~~~~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e  436 (626)
T KOG2106|consen  363 TVQGHGDELWGLATHP--SKNQLLTCGQDKHVRLWN---DHKLEWTKIIEDPAECADFHPSG-VVAVGTATGRWFVLDTE  436 (626)
T ss_pred             EEEecccceeeEEcCC--ChhheeeccCcceEEEcc---CCceeEEEEecCceeEeeccCcc-eEEEeeccceEEEEecc
Confidence            4568999999999999  999999999999999999   33445555677889999999999 99999999999999999


Q ss_pred             CCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCcccc
Q psy7108         122 SAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDG  201 (703)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~  201 (703)
                      +...+..-.. ..                    ++++++|+|+|.+||.|+.|+.|++|-+..+.......+..      
T Consensus       437 ~~~lv~~~~d-~~--------------------~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~------  489 (626)
T KOG2106|consen  437 TQDLVTIHTD-NE--------------------QLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKC------  489 (626)
T ss_pred             cceeEEEEec-CC--------------------ceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeeee------
Confidence            8655544333 32                    89999999999999999999999999987644332222111      


Q ss_pred             ccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceee------------------cCCccceEEEEEcCCC
Q psy7108         202 INDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARV------------------LKPEVRVFCVKFSPTG  263 (703)
Q Consensus       202 ~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~------------------~~h~~~V~~l~~spdg  263 (703)
                      +.++|+.+.||+|++++...+.+      ..+-.|...........                  ..+...|..++-+.+.
T Consensus       490 ~gs~ithLDwS~Ds~~~~~~S~d------~eiLyW~~~~~~~~ts~kDvkW~t~~c~lGF~v~g~s~~t~i~a~~rs~~~  563 (626)
T KOG2106|consen  490 SGSPITHLDWSSDSQFLVSNSGD------YEILYWKPSECKQITSVKDVKWATYTCTLGFEVFGGSDGTDINAVARSHCE  563 (626)
T ss_pred             cCceeEEeeecCCCceEEeccCc------eEEEEEccccCcccceecceeeeeeEEEEEEEEecccCCchHHHhhhhhhh
Confidence            11589999999999998876654      57888843322221111                  1244556777778888


Q ss_pred             CEEEEEeCCC-EEEEEcCCCceecce---------eeeEEEccchhhhHhhcCCcceEEEEEEec
Q psy7108         264 QAWVAATTEG-VHIYSLDSGYVFDPF---------LLDISITPQSVKEALADKDYAKALMMSLKL  318 (703)
Q Consensus       264 ~~l~s~s~Dg-v~iwd~~~~~~~~~~---------~~~~~~spd~~~~~l~sg~~~~~l~la~~l  318 (703)
                      +.+|+|.+.| |++|..+-.+...++         ..+++|.-+.  ..+.+...|..+.. |++
T Consensus       564 ~~lA~gdd~g~v~lf~yPc~s~rA~~he~~ghs~~vt~V~Fl~~d--~~li~tg~D~Si~q-W~l  625 (626)
T KOG2106|consen  564 KLLASGDDFGKVHLFSYPCSSPRAPSHEYGGHSSHVTNVAFLCKD--SHLISTGKDTSIMQ-WRL  625 (626)
T ss_pred             hhhhccccCceEEEEccccCCCcccceeeccccceeEEEEEeeCC--ceEEecCCCceEEE-EEe
Confidence            8999999999 999997765543332         3568887655  33333336666554 765

>KOG1007|consensus

Probab=99.62  E-value=3.2e-14  Score=136.26  Aligned_cols=204  Identities=17%  Similarity=0.346  Sum_probs=149.2

Q ss_pred             cccc-CCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCcee-EEEe-----cCCCcEEEEEEec--CCCEEEEEEC
Q psy7108          41 EVLS-GHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQ-HETI-----QLLSDALCVAYKP--DGTEIVVATL  111 (703)
Q Consensus        41 ~~l~-gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~-~~~~-----~~~~~V~~v~~sp--dg~~las~s~  111 (703)
                      ..|. .|-+.|.|+.|.|  ++..+++-. |..|.+|+++.+... ..+.     .+....++-+|+|  ||+.+++. .
T Consensus       116 ~~Ldteavg~i~cvew~P--ns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt-~  191 (370)
T KOG1007|consen  116 ASLDTEAVGKINCVEWEP--NSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATT-S  191 (370)
T ss_pred             hcCCHHHhCceeeEEEcC--CCCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEe-C
Confidence            4454 5667999999999  999998876 789999999877652 2222     2455678899998  77787776 5


Q ss_pred             CCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCE-EEEEecCCcEEEEECCCC-ceEE
Q psy7108         112 DGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSC-ILAAGQSKYICIYSSREG-ILLK  189 (703)
Q Consensus       112 dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~-l~s~s~dg~I~lwD~~~~-~~~~  189 (703)
                      |+++..||+++......++.                   +|+..|..+.|+|+-++ |++|+.||.|++||.+.- .++.
T Consensus       192 d~tl~~~D~RT~~~~~sI~d-------------------AHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~  252 (370)
T KOG1007|consen  192 DSTLQFWDLRTMKKNNSIED-------------------AHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQ  252 (370)
T ss_pred             CCcEEEEEccchhhhcchhh-------------------hhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCcccc
Confidence            89999999998776655543                   34558999999998654 677899999999999864 3444


Q ss_pred             EEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC----------------------------
Q psy7108         190 KFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG----------------------------  241 (703)
Q Consensus       190 ~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~----------------------------  241 (703)
                      .+.        +|.-+|.++.|+|.-..++.+++.+     ..|.+|....-                            
T Consensus       253 el~--------~HsHWvW~VRfn~~hdqLiLs~~SD-----s~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~  319 (370)
T KOG1007|consen  253 ELP--------GHSHWVWAVRFNPEHDQLILSGGSD-----SAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQ  319 (370)
T ss_pred             ccC--------CCceEEEEEEecCccceEEEecCCC-----ceeEEEeccccccccccccccccccCcchhhHHhccccc
Confidence            444        4455999999999877666655443     34555532110                            


Q ss_pred             -ccceeecCCccceEEEEEcCCCCEE-EEEeCCC-EEEEEcC
Q psy7108         242 -DMAARVLKPEVRVFCVKFSPTGQAW-VAATTEG-VHIYSLD  280 (703)
Q Consensus       242 -~~~~~~~~h~~~V~~l~~spdg~~l-~s~s~Dg-v~iwd~~  280 (703)
                       ..+.++..|+..|.+++||.-..++ |+-+.|| +.|=.+.
T Consensus       320 dg~l~tydehEDSVY~~aWSsadPWiFASLSYDGRviIs~V~  361 (370)
T KOG1007|consen  320 DGQLETYDEHEDSVYALAWSSADPWIFASLSYDGRVIISSVP  361 (370)
T ss_pred             ccccccccccccceEEEeeccCCCeeEEEeccCceEEeecCC
Confidence             1133566799999999999877775 8899999 7665543

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.62  E-value=2.7e-14  Score=156.47  Aligned_cols=207  Identities=14%  Similarity=0.177  Sum_probs=142.8

Q ss_pred             CceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCC---CcEEEEEcCCCceeEEEecCCCcEEEEEEecCC
Q psy7108          27 GVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWD---KTVKLWNAVETDTQHETIQLLSDALCVAYKPDG  103 (703)
Q Consensus        27 ~v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~D---g~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg  103 (703)
                      .+.+||.+|...  +++..|...+.+++|+|  ||+.|+.++.+   ..|++||+.+++. ..+....+...+++|+|||
T Consensus       185 ~i~i~d~dg~~~--~~lt~~~~~v~~p~wSP--DG~~la~~s~~~~~~~i~i~dl~tg~~-~~l~~~~g~~~~~~wSPDG  259 (429)
T PRK01742        185 EVRVADYDGFNQ--FIVNRSSQPLMSPAWSP--DGSKLAYVSFENKKSQLVVHDLRSGAR-KVVASFRGHNGAPAFSPDG  259 (429)
T ss_pred             EEEEECCCCCCc--eEeccCCCccccceEcC--CCCEEEEEEecCCCcEEEEEeCCCCce-EEEecCCCccCceeECCCC
Confidence            455677777766  78888999999999999  99999988754   3699999987643 2233333445578999999


Q ss_pred             CEEEEEE-CCCeEE--EEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe-cCCcEEE
Q psy7108         104 TEIVVAT-LDGQLI--MFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG-QSKYICI  179 (703)
Q Consensus       104 ~~las~s-~dg~I~--vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s-~dg~I~l  179 (703)
                      +.|++++ .+|.+.  +||+.+++.. .+..+..                    .+...+|+|||+.|+.++ .++...+
T Consensus       260 ~~La~~~~~~g~~~Iy~~d~~~~~~~-~lt~~~~--------------------~~~~~~wSpDG~~i~f~s~~~g~~~I  318 (429)
T PRK01742        260 SRLAFASSKDGVLNIYVMGANGGTPS-QLTSGAG--------------------NNTEPSWSPDGQSILFTSDRSGSPQV  318 (429)
T ss_pred             CEEEEEEecCCcEEEEEEECCCCCeE-eeccCCC--------------------CcCCEEECCCCCEEEEEECCCCCceE
Confidence            9988765 577654  5566666543 3333322                    567899999999887655 5677888


Q ss_pred             EECCCC-ceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEE
Q psy7108         180 YSSREG-ILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVK  258 (703)
Q Consensus       180 wD~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~  258 (703)
                      |++... .....+ .+        ..  ....|+|||+.+++.+.+       .+.+||+.+++.......+  ...+++
T Consensus       319 ~~~~~~~~~~~~l-~~--------~~--~~~~~SpDG~~ia~~~~~-------~i~~~Dl~~g~~~~lt~~~--~~~~~~  378 (429)
T PRK01742        319 YRMSASGGGASLV-GG--------RG--YSAQISADGKTLVMINGD-------NVVKQDLTSGSTEVLSSTF--LDESPS  378 (429)
T ss_pred             EEEECCCCCeEEe-cC--------CC--CCccCCCCCCEEEEEcCC-------CEEEEECCCCCeEEecCCC--CCCCce
Confidence            876432 222222 11        11  346799999998887653       3556899888654332222  345688


Q ss_pred             EcCCCCEEEEEeCCC-EEEEEc
Q psy7108         259 FSPTGQAWVAATTEG-VHIYSL  279 (703)
Q Consensus       259 ~spdg~~l~s~s~Dg-v~iwd~  279 (703)
                      |+|||++++.++.++ ..+|.+
T Consensus       379 ~sPdG~~i~~~s~~g~~~~l~~  400 (429)
T PRK01742        379 ISPNGIMIIYSSTQGLGKVLQL  400 (429)
T ss_pred             ECCCCCEEEEEEcCCCceEEEE
Confidence            999999999998888 766664

>KOG0771|consensus

Probab=99.61  E-value=4.3e-15  Score=149.70  Aligned_cols=200  Identities=14%  Similarity=0.120  Sum_probs=149.8

Q ss_pred             EEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEe
Q psy7108          51 SCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVE  130 (703)
Q Consensus        51 ~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~  130 (703)
                      .+++|++  +|..|++|+.||++|+|+..+.........|...|.++.|+|||+.|++-+.| ..+||+.+++..+....
T Consensus       148 k~vaf~~--~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t  224 (398)
T KOG0771|consen  148 KVVAFNG--DGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKT  224 (398)
T ss_pred             eEEEEcC--CCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcC
Confidence            7899999  99999999999999999988887778888899999999999999999999999 99999999996555443


Q ss_pred             ccccCCCCCCCCccchhhcccCCccEEEEEEcCCC---CEE--EEEecCCcEEEEECCCCceEEEEEeccCCcccccccc
Q psy7108         131 ARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADG---SCI--LAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDF  205 (703)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg---~~l--~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~  205 (703)
                      ...                  .......+.|+.|+   .+.  +.....+.|..||+.....-..+....   .......
T Consensus       225 ~~~------------------k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~---~~~~~~s  283 (398)
T KOG0771|consen  225 PFS------------------KDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRK---KIKRFKS  283 (398)
T ss_pred             Ccc------------------cchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhh---hhhccCc
Confidence            211                  11245667787776   332  233445567777764322111111110   1111237


Q ss_pred             ceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeec-CCccceEEEEEcCCCCEEEEEeCCC-EEEEEcC
Q psy7108         206 INRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL-KPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLD  280 (703)
Q Consensus       206 v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~-~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~  280 (703)
                      |.+++++++|+++++++.+|      .|-+++..+.+..+... .|...|+.+.|+||.+++++.+.+. ..|..+.
T Consensus       284 iSsl~VS~dGkf~AlGT~dG------sVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~  354 (398)
T KOG0771|consen  284 ISSLAVSDDGKFLALGTMDG------SVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLA  354 (398)
T ss_pred             ceeEEEcCCCcEEEEeccCC------cEEEEEeceeeeeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEe
Confidence            89999999999999999865      78889888877666554 5889999999999999999888777 6666654

>KOG1538|consensus

Probab=99.61  E-value=1.3e-14  Score=152.40  Aligned_cols=263  Identities=14%  Similarity=0.215  Sum_probs=189.3

Q ss_pred             eeEEeeecccCCceEEecCC-ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeE
Q psy7108           8 SLIETRETHEGGNVVLKLPG-VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQH   85 (703)
Q Consensus         8 ~~~~~~~~~~~~~~~i~~~~-v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~   85 (703)
                      .+....|.-+|+..+++.-+ +-++| .+|.++  .+|+||.+.|+|++|+.  ||..+|||+.|+.|.+|+-.-.+  .
T Consensus        14 ci~d~afkPDGsqL~lAAg~rlliyD~ndG~ll--qtLKgHKDtVycVAys~--dGkrFASG~aDK~VI~W~~klEG--~   87 (1081)
T KOG1538|consen   14 CINDIAFKPDGTQLILAAGSRLLVYDTSDGTLL--QPLKGHKDTVYCVAYAK--DGKRFASGSADKSVIIWTSKLEG--I   87 (1081)
T ss_pred             chheeEECCCCceEEEecCCEEEEEeCCCcccc--cccccccceEEEEEEcc--CCceeccCCCceeEEEecccccc--e
Confidence            44556677777777777544 55566 578888  99999999999999999  99999999999999999864332  2


Q ss_pred             EEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCC
Q psy7108          86 ETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADG  165 (703)
Q Consensus        86 ~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg  165 (703)
                      -...|.+.|.|+.|+|-...|++++.+ ..-+|..+.....+ .+.                     ...+.+++|+.||
T Consensus        88 LkYSH~D~IQCMsFNP~~h~LasCsLs-dFglWS~~qK~V~K-~ks---------------------s~R~~~CsWtnDG  144 (1081)
T KOG1538|consen   88 LKYSHNDAIQCMSFNPITHQLASCSLS-DFGLWSPEQKSVSK-HKS---------------------SSRIICCSWTNDG  144 (1081)
T ss_pred             eeeccCCeeeEeecCchHHHhhhcchh-hccccChhhhhHHh-hhh---------------------heeEEEeeecCCC
Confidence            335699999999999999999998764 35677765433211 111                     2268899999999


Q ss_pred             CEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCC-----EEEEEcccCCCCCeeEEECCCCCC
Q psy7108         166 SCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGN-----VSLIETRETHEGGNVVLKLPGVKK  240 (703)
Q Consensus       166 ~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~-----~l~~~~~~~~~~~~~~i~iwd~~~  240 (703)
                      ++++.|-.+|+|.+=+- +++....++.+     .|.+++|.+++|+|...     .+++...+      .++.++.+ +
T Consensus       145 qylalG~~nGTIsiRNk-~gEek~~I~Rp-----gg~Nspiwsi~~~p~sg~G~~di~aV~DW~------qTLSFy~L-s  211 (1081)
T KOG1538|consen  145 QYLALGMFNGTISIRNK-NGEEKVKIERP-----GGSNSPIWSICWNPSSGEGRNDILAVADWG------QTLSFYQL-S  211 (1081)
T ss_pred             cEEEEeccCceEEeecC-CCCcceEEeCC-----CCCCCCceEEEecCCCCCCccceEEEEecc------ceeEEEEe-c
Confidence            99999999999998763 34444444432     23557999999998753     12221111      13333333 2


Q ss_pred             CccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCC-----CceecceeeeEEEccchhhhHhhcCCcceEEEE
Q psy7108         241 GDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDS-----GYVFDPFLLDISITPQSVKEALADKDYAKALMM  314 (703)
Q Consensus       241 ~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~-----~~~~~~~~~~~~~spd~~~~~l~sg~~~~~l~l  314 (703)
                      |+.+..-..-.-...|+.+.|+|.++..|+.|+ +++|..+.     -...+.+.+++...|++  ...+.|..|+++.-
T Consensus       212 G~~Igk~r~L~FdP~CisYf~NGEy~LiGGsdk~L~~fTR~GvrLGTvg~~D~WIWtV~~~PNs--Q~v~~GCqDGTiAC  289 (1081)
T KOG1538|consen  212 GKQIGKDRALNFDPCCISYFTNGEYILLGGSDKQLSLFTRDGVRLGTVGEQDSWIWTVQAKPNS--QYVVVGCQDGTIAC  289 (1081)
T ss_pred             ceeecccccCCCCchhheeccCCcEEEEccCCCceEEEeecCeEEeeccccceeEEEEEEccCC--ceEEEEEccCeeeh
Confidence            333333333344567899999999999999999 88987543     22267778999999999  78888888888764

>KOG0644|consensus

Probab=99.61  E-value=6.4e-16  Score=166.07  Aligned_cols=244  Identities=15%  Similarity=0.221  Sum_probs=177.7

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEc
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDV  120 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~  120 (703)
                      +.|.||..+|+|+.|..  .|.++++|+.|..|+||..++..+.....+|.+.++.++.+.++.++++++.|..|++|.+
T Consensus       184 krLlgH~naVyca~fDr--tg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl  261 (1113)
T KOG0644|consen  184 KRLLGHRNAVYCAIFDR--TGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRL  261 (1113)
T ss_pred             HHHHhhhhheeeeeecc--ccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEEec
Confidence            56789999999999999  9999999999999999999999888999999999999999999999999999999999999


Q ss_pred             CCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCce-------------
Q psy7108         121 ESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGIL-------------  187 (703)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~-------------  187 (703)
                      .++.++..+.+|..                    .|++++|+|-.    +.+.||++++||.+-.-.             
T Consensus       262 ~~~~pvsvLrghtg--------------------avtaiafsP~~----sss~dgt~~~wd~r~~~~~y~prp~~~~~~~  317 (1113)
T KOG0644|consen  262 PDGAPVSVLRGHTG--------------------AVTAIAFSPRA----SSSDDGTCRIWDARLEPRIYVPRPLKFTEKD  317 (1113)
T ss_pred             CCCchHHHHhcccc--------------------ceeeeccCccc----cCCCCCceEeccccccccccCCCCCCccccc
Confidence            99999999988865                    89999999954    778899999999871100             


Q ss_pred             -EEEEEecc--C------CccccccccceeeeeccCCCEEEEEcccCC-----CCCeeEEECCCCCCCccceeecCCccc
Q psy7108         188 -LKKFTITQ--N------KSLDGINDFINRRKMTEFGNVSLIETRETH-----EGGNVVLKLPGVKKGDMAARVLKPEVR  253 (703)
Q Consensus       188 -~~~~~~~~--~------~~~~~~~~~v~~~~~spdg~~l~~~~~~~~-----~~~~~~i~iwd~~~~~~~~~~~~h~~~  253 (703)
                       ...+....  .      .....-......+++...+-.++...++-+     ...+..+++|++.+|.......+|...
T Consensus       318 ~~~s~~~~~~~~~f~Tgs~d~ea~n~e~~~l~~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~ghsd~  397 (1113)
T KOG0644|consen  318 LVDSILFENNGDRFLTGSRDGEARNHEFEQLAWRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLMGHSDE  397 (1113)
T ss_pred             ceeeeeccccccccccccCCcccccchhhHhhhhccceEEEeccccccccceeeeeeeEeeeeecccchhhhhhcccccc
Confidence             00000000  0      000000011112222222222222111110     112357889999999999999999999


Q ss_pred             eEEEEEcCCCCEE-EEEeCCC-EEEEEcCCCceeccee------eeEEEccchhhhHhhcCCcceEE
Q psy7108         254 VFCVKFSPTGQAW-VAATTEG-VHIYSLDSGYVFDPFL------LDISITPQSVKEALADKDYAKAL  312 (703)
Q Consensus       254 V~~l~~spdg~~l-~s~s~Dg-v~iwd~~~~~~~~~~~------~~~~~spd~~~~~l~sg~~~~~l  312 (703)
                      +..+.++|-...+ .+++.|| ..|||.-.|.....+.      .+..||+||  ..++-.+..+.+
T Consensus       398 ~yvLd~Hpfn~ri~msag~dgst~iwdi~eg~pik~y~~gh~kl~d~kFSqdg--ts~~lsd~hgql  462 (1113)
T KOG0644|consen  398 VYVLDVHPFNPRIAMSAGYDGSTIIWDIWEGIPIKHYFIGHGKLVDGKFSQDG--TSIALSDDHGQL  462 (1113)
T ss_pred             eeeeeecCCCcHhhhhccCCCceEeeecccCCcceeeecccceeeccccCCCC--ceEecCCCCCce
Confidence            9999999977655 6899999 9999998887755443      456788887  333333333333

>KOG1063|consensus

Probab=99.60  E-value=3.7e-14  Score=150.34  Aligned_cols=262  Identities=15%  Similarity=0.182  Sum_probs=183.4

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc----eeEEEecCCCcEEEEEEecCCCEEEEEECCCeEE
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD----TQHETIQLLSDALCVAYKPDGTEIVVATLDGQLI  116 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~----~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~  116 (703)
                      ..+.||.+.|++++|+|  .|.+|+|.|.|.+-|++-.-..+    ++.+..-|...++|++|-+....+++|...+.++
T Consensus       355 ~~iSGH~~~V~dv~W~p--sGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn~~~~FVSgAdEKVlR  432 (764)
T KOG1063|consen  355 PVISGHVDGVKDVDWDP--SGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVNEDLQFVSGADEKVLR  432 (764)
T ss_pred             cccccccccceeeeecC--CCCEEEEeccccceeeecccccccceeeecccccccccceeeehccCCceeeecccceeee
Confidence            46789999999999999  99999999999999998754222    2233344888999999998777889998899999


Q ss_pred             EEEcCC----------Cc------------EEEEEecc-c-----cCCCCCC----------------------------
Q psy7108         117 MFDVES----------AA------------QVGSVEAR-R-----DLDSGRL----------------------------  140 (703)
Q Consensus       117 vwd~~~----------~~------------~~~~~~~~-~-----~~~~~~~----------------------------  140 (703)
                      +++...          +.            .+..+.-. +     ....+..                            
T Consensus       433 vF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L~ePP~EdqLq~~  512 (764)
T KOG1063|consen  433 VFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCELTEPPTEDQLQQN  512 (764)
T ss_pred             eecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchhccCCChHHHHHHh
Confidence            998642          10            00000000 0     0000000                            


Q ss_pred             CCccchhhcccCCccEEEEEEcCCCCEEEEEecCC-----cEEEEECCCCceEEEEEeccCCccccccccceeeeeccCC
Q psy7108         141 DTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSK-----YICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFG  215 (703)
Q Consensus       141 ~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg-----~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg  215 (703)
                      ...+...+..+|+-.|.+++.+|+|+.+++++...     .|++|+..+...+..+..        |.-.|+.++|||||
T Consensus       513 tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~--------HsLTVT~l~FSpdg  584 (764)
T KOG1063|consen  513 TLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEG--------HSLTVTRLAFSPDG  584 (764)
T ss_pred             ccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecc--------cceEEEEEEECCCC
Confidence            00011223457899999999999999999987653     599999988776665554        44489999999999


Q ss_pred             CEEEEEcccCCCCCeeEEECCCCCCCcc----ceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCC--ceecc-
Q psy7108         216 NVSLIETRETHEGGNVVLKLPGVKKGDM----AARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSG--YVFDP-  287 (703)
Q Consensus       216 ~~l~~~~~~~~~~~~~~i~iwd~~~~~~----~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~--~~~~~-  287 (703)
                      +++++.+.+      +++.+|.......    ......|..-|+++.|+|++.+++|+|.|. |+||.....  +.+.. 
T Consensus       585 ~~LLsvsRD------Rt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~~d~~i~~~  658 (764)
T KOG1063|consen  585 RYLLSVSRD------RTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDLRDKYISRF  658 (764)
T ss_pred             cEEEEeecC------ceEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccCchhhhhhhh
Confidence            999998876      6899997654321    122557889999999999999999999999 999998877  33222 


Q ss_pred             --e-----eeeEEEccchh---hhHhhcCCcceEEEEEEecC
Q psy7108         288 --F-----LLDISITPQSV---KEALADKDYAKALMMSLKLN  319 (703)
Q Consensus       288 --~-----~~~~~~spd~~---~~~l~sg~~~~~l~la~~l~  319 (703)
                        .     ...+++.|-..   ...++.|-..+.|.+ |+..
T Consensus       659 a~~~~~~aVTAv~~~~~~~~e~~~~vavGle~GeI~l-~~~~  699 (764)
T KOG1063|consen  659 ACLKFSLAVTAVAYLPVDHNEKGDVVAVGLEKGEIVL-WRRK  699 (764)
T ss_pred             chhccCCceeeEEeeccccccccceEEEEecccEEEE-Eecc
Confidence              1     23344444211   124556666666666 6543

>KOG1524|consensus

Probab=99.58  E-value=3.8e-14  Score=145.86  Aligned_cols=190  Identities=18%  Similarity=0.273  Sum_probs=148.3

Q ss_pred             eeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEE
Q psy7108          30 KGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVA  109 (703)
Q Consensus        30 ~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~  109 (703)
                      +.++.|+..  +...+|.+.|.|-.|+|  ||.-|+|++.||.|++|.- ++-....+.+...+|+|++|.|+.+.++.+
T Consensus        89 il~k~~rVE--~sv~AH~~A~~~gRW~~--dGtgLlt~GEDG~iKiWSr-sGMLRStl~Q~~~~v~c~~W~p~S~~vl~c  163 (737)
T KOG1524|consen   89 ILNKSARVE--RSISAHAAAISSGRWSP--DGAGLLTAGEDGVIKIWSR-SGMLRSTVVQNEESIRCARWAPNSNSIVFC  163 (737)
T ss_pred             Eecccchhh--hhhhhhhhhhhhcccCC--CCceeeeecCCceEEEEec-cchHHHHHhhcCceeEEEEECCCCCceEEe
Confidence            345678877  88999999999999999  9999999999999999994 443333444577899999999999877776


Q ss_pred             ECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEE
Q psy7108         110 TLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLK  189 (703)
Q Consensus       110 s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~  189 (703)
                       ..+.+.+=.+.....+-..+.|..                    -|.++.|++..+.+++|+.|-..++||.. |..+.
T Consensus       164 -~g~h~~IKpL~~n~k~i~WkAHDG--------------------iiL~~~W~~~s~lI~sgGED~kfKvWD~~-G~~Lf  221 (737)
T KOG1524|consen  164 -QGGHISIKPLAANSKIIRWRAHDG--------------------LVLSLSWSTQSNIIASGGEDFRFKIWDAQ-GANLF  221 (737)
T ss_pred             -cCCeEEEeecccccceeEEeccCc--------------------EEEEeecCccccceeecCCceeEEeeccc-Ccccc
Confidence             356777777766666666666654                    79999999999999999999999999965 44443


Q ss_pred             EEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEE
Q psy7108         190 KFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAA  269 (703)
Q Consensus       190 ~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~  269 (703)
                      +-.        .|+.+|++++|.|+ +.+++.+..       ++++-           ....+.|..++||+||..++.|
T Consensus       222 ~S~--------~~ey~ITSva~npd-~~~~v~S~n-------t~R~~-----------~p~~GSifnlsWS~DGTQ~a~g  274 (737)
T KOG1524|consen  222 TSA--------AEEYAITSVAFNPE-KDYLLWSYN-------TARFS-----------SPRVGSIFNLSWSADGTQATCG  274 (737)
T ss_pred             cCC--------hhccceeeeeeccc-cceeeeeee-------eeeec-----------CCCccceEEEEEcCCCceeecc
Confidence            322        34559999999999 555554432       44422           2234678999999999999999


Q ss_pred             eCCC
Q psy7108         270 TTEG  273 (703)
Q Consensus       270 s~Dg  273 (703)
                      +..|
T Consensus       275 t~~G  278 (737)
T KOG1524|consen  275 TSTG  278 (737)
T ss_pred             ccCc
Confidence            9998

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.57  E-value=4.8e-13  Score=146.31  Aligned_cols=216  Identities=12%  Similarity=0.185  Sum_probs=149.0

Q ss_pred             CceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeC---CCcEEEEEcCCCceeEEEecCCCcEEEEEEecCC
Q psy7108          27 GVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASW---DKTVKLWNAVETDTQHETIQLLSDALCVAYKPDG  103 (703)
Q Consensus        27 ~v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~---Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg  103 (703)
                      .+.++|.+|...  +.+..+...+.+.+|+|  ||+.|+..+.   +..+.+|++.+++ ...+....+.+..++|+|||
T Consensus       180 ~l~~~d~dg~~~--~~lt~~~~~~~~p~wSP--DG~~la~~s~~~g~~~i~i~dl~~G~-~~~l~~~~~~~~~~~~SPDG  254 (429)
T PRK03629        180 ELRVSDYDGYNQ--FVVHRSPQPLMSPAWSP--DGSKLAYVTFESGRSALVIQTLANGA-VRQVASFPRHNGAPAFSPDG  254 (429)
T ss_pred             eEEEEcCCCCCC--EEeecCCCceeeeEEcC--CCCEEEEEEecCCCcEEEEEECCCCC-eEEccCCCCCcCCeEECCCC
Confidence            344677777765  67777888999999999  9999987643   3578999997764 34444455556678999999


Q ss_pred             CEEEEE-ECCC--eEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC-C--cE
Q psy7108         104 TEIVVA-TLDG--QLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS-K--YI  177 (703)
Q Consensus       104 ~~las~-s~dg--~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d-g--~I  177 (703)
                      +.|+.. +.+|  .|++||+++++.........                     .+...+|+|||+.|+.++.+ +  .|
T Consensus       255 ~~La~~~~~~g~~~I~~~d~~tg~~~~lt~~~~---------------------~~~~~~wSPDG~~I~f~s~~~g~~~I  313 (429)
T PRK03629        255 SKLAFALSKTGSLNLYVMDLASGQIRQVTDGRS---------------------NNTEPTWFPDSQNLAYTSDQAGRPQV  313 (429)
T ss_pred             CEEEEEEcCCCCcEEEEEECCCCCEEEccCCCC---------------------CcCceEECCCCCEEEEEeCCCCCceE
Confidence            988865 3344  59999998886654332221                     46778999999999877654 3  45


Q ss_pred             EEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEE
Q psy7108         178 CIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCV  257 (703)
Q Consensus       178 ~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l  257 (703)
                      +++|+.++... .+....        .......|+|||+.+++....+   +...+.+||+.+++.......  ......
T Consensus       314 y~~d~~~g~~~-~lt~~~--------~~~~~~~~SpDG~~Ia~~~~~~---g~~~I~~~dl~~g~~~~Lt~~--~~~~~p  379 (429)
T PRK03629        314 YKVNINGGAPQ-RITWEG--------SQNQDADVSSDGKFMVMVSSNG---GQQHIAKQDLATGGVQVLTDT--FLDETP  379 (429)
T ss_pred             EEEECCCCCeE-EeecCC--------CCccCEEECCCCCEEEEEEccC---CCceEEEEECCCCCeEEeCCC--CCCCCc
Confidence            66677766543 322111        1345688999999988876542   224688899988764432222  223467


Q ss_pred             EEcCCCCEEEEEeCCC----EEEEEcCCC
Q psy7108         258 KFSPTGQAWVAATTEG----VHIYSLDSG  282 (703)
Q Consensus       258 ~~spdg~~l~s~s~Dg----v~iwd~~~~  282 (703)
                      .|+|||+.++.++.++    +.+++++.+
T Consensus       380 ~~SpDG~~i~~~s~~~~~~~l~~~~~~G~  408 (429)
T PRK03629        380 SIAPNGTMVIYSSSQGMGSVLNLVSTDGR  408 (429)
T ss_pred             eECCCCCEEEEEEcCCCceEEEEEECCCC
Confidence            8999999998888776    566777543

>KOG0290|consensus

Probab=99.56  E-value=1.1e-13  Score=132.79  Aligned_cols=217  Identities=12%  Similarity=0.157  Sum_probs=155.5

Q ss_pred             ccCCCccccccccCCCcCeEEEEEcCCCCC-----CEEEEEeCCCcEEEEEcCCCceeE---------EEecCCCcEEEE
Q psy7108          32 DMAARVLKPEVLSGHEGPVSCIEFSPVLSS-----TGMVSASWDKTVKLWNAVETDTQH---------ETIQLLSDALCV   97 (703)
Q Consensus        32 d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg-----~~L~sgs~Dg~V~iWd~~~~~~~~---------~~~~~~~~V~~v   97 (703)
                      +.+++.+...+ ..|.-+++.+.|.|  +.     ++|||++.  .+|+|.+...+...         ....+..++++.
T Consensus        82 ~~s~e~~~~a~-fd~~YP~tK~~wiP--d~~g~~pdlLATs~D--~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSF  156 (364)
T KOG0290|consen   82 EDSGELVEDAN-FDHPYPVTKLMWIP--DSKGVYPDLLATSSD--FLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSF  156 (364)
T ss_pred             cCCCceeccCC-CCCCCCccceEecC--CccccCcchhhcccC--eEEEEeccCcCCceehhhhhccCcccccCCccccc
Confidence            44555541122 36899999999999  54     47777764  79999987422111         112356789999


Q ss_pred             EEec-CCCEEEEEECCCeEEEEEcCCCcE---EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCC-CEEEEEe
Q psy7108          98 AYKP-DGTEIVVATLDGQLIMFDVESAAQ---VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADG-SCILAAG  172 (703)
Q Consensus        98 ~~sp-dg~~las~s~dg~I~vwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg-~~l~s~s  172 (703)
                      .|+. |-++|.+++-|-+..|||++++..   ...+-                    +|.+.|..++|...+ +.+++.+
T Consensus       157 DWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLI--------------------AHDKEV~DIaf~~~s~~~FASvg  216 (364)
T KOG0290|consen  157 DWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLI--------------------AHDKEVYDIAFLKGSRDVFASVG  216 (364)
T ss_pred             ccccCCcceeEeecccCeEEEEEEeeccccceeeEEE--------------------ecCcceeEEEeccCccceEEEec
Confidence            9986 457889999999999999998732   22333                    345599999999865 5678899


Q ss_pred             cCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC-ccceeecCCc
Q psy7108         173 QSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG-DMAARVLKPE  251 (703)
Q Consensus       173 ~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~-~~~~~~~~h~  251 (703)
                      .||.++++|++..+....+-....     ...+...++|++....+++.-..+.    ..|.+.|++.. .++.++.+|.
T Consensus       217 aDGSvRmFDLR~leHSTIIYE~p~-----~~~pLlRLswnkqDpnymATf~~dS----~~V~iLDiR~P~tpva~L~~H~  287 (364)
T KOG0290|consen  217 ADGSVRMFDLRSLEHSTIIYEDPS-----PSTPLLRLSWNKQDPNYMATFAMDS----NKVVILDIRVPCTPVARLRNHQ  287 (364)
T ss_pred             CCCcEEEEEecccccceEEecCCC-----CCCcceeeccCcCCchHHhhhhcCC----ceEEEEEecCCCcceehhhcCc
Confidence            999999999997654333221111     1246778889887765444332221    36888898854 6778889999


Q ss_pred             cceEEEEEcCCC-CEEEEEeCCC-EEEEEcCCC
Q psy7108         252 VRVFCVKFSPTG-QAWVAATTEG-VHIYSLDSG  282 (703)
Q Consensus       252 ~~V~~l~~spdg-~~l~s~s~Dg-v~iwd~~~~  282 (703)
                      +.|++++|.|.. ..+++++.|. +.+||++..
T Consensus       288 a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~  320 (364)
T KOG0290|consen  288 ASVNGIAWAPHSSSHICTAGDDCQALIWDLQQM  320 (364)
T ss_pred             ccccceEecCCCCceeeecCCcceEEEEecccc
Confidence            999999999965 5789999999 999999753

>KOG1007|consensus

Probab=99.56  E-value=1.1e-13  Score=132.53  Aligned_cols=220  Identities=14%  Similarity=0.229  Sum_probs=162.8

Q ss_pred             ccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCC----C---cEEEEEcCCCcee---------EEEe-cCCCcE
Q psy7108          32 DMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWD----K---TVKLWNAVETDTQ---------HETI-QLLSDA   94 (703)
Q Consensus        32 d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~D----g---~V~iWd~~~~~~~---------~~~~-~~~~~V   94 (703)
                      |..+..+...+|..|.+.|..++-+|. +...|+|+-.|    |   ..-||.+......         ..+- .+-+.|
T Consensus        48 d~e~s~l~skvf~h~agEvw~las~P~-d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~Ldteavg~i  126 (370)
T KOG1007|consen   48 DSEGSELLSKVFFHHAGEVWDLASSPF-DQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVASLDTEAVGKI  126 (370)
T ss_pred             cCccchhhhhhhhcCCcceehhhcCCC-CCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhcCCHHHhCce
Confidence            334444445788889999999999996 77788887442    1   3569998654322         1111 244689


Q ss_pred             EEEEEecCCCEEEEEECCCeEEEEEcCCCcE-EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC--CCCEEEEE
Q psy7108          95 LCVAYKPDGTEIVVATLDGQLIMFDVESAAQ-VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA--DGSCILAA  171 (703)
Q Consensus        95 ~~v~~spdg~~las~s~dg~I~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp--dg~~l~s~  171 (703)
                      .|+.|.|++..+++-. |..|.+|+++.+.. +..+.....               ..+....++-+|+|  ||+.+++.
T Consensus       127 ~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s---------------~e~~~~ftsg~WspHHdgnqv~tt  190 (370)
T KOG1007|consen  127 NCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSES---------------AEMRHSFTSGAWSPHHDGNQVATT  190 (370)
T ss_pred             eeEEEcCCCCeeEEec-cCceEEEEcccCcchheeeccccc---------------ccccceecccccCCCCccceEEEe
Confidence            9999999999998875 88999999988765 333332211               11344688899999  78877765


Q ss_pred             ecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC-ccceeecCC
Q psy7108         172 GQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG-DMAARVLKP  250 (703)
Q Consensus       172 s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~-~~~~~~~~h  250 (703)
                       .|+++..||+++..+...+.       ++|...|..+.|+|+-++++++++++     ..|++||.+.- .++..+.+|
T Consensus       191 -~d~tl~~~D~RT~~~~~sI~-------dAHgq~vrdlDfNpnkq~~lvt~gDd-----gyvriWD~R~tk~pv~el~~H  257 (370)
T KOG1007|consen  191 -SDSTLQFWDLRTMKKNNSIE-------DAHGQRVRDLDFNPNKQHILVTCGDD-----GYVRIWDTRKTKFPVQELPGH  257 (370)
T ss_pred             -CCCcEEEEEccchhhhcchh-------hhhcceeeeccCCCCceEEEEEcCCC-----ccEEEEeccCCCccccccCCC
Confidence             47999999999876654443       34555889999999999988888764     47999999854 678888999


Q ss_pred             ccceEEEEEcCCCC-EEEEEeCCC-EEEEEcCC
Q psy7108         251 EVRVFCVKFSPTGQ-AWVAATTEG-VHIYSLDS  281 (703)
Q Consensus       251 ~~~V~~l~~spdg~-~l~s~s~Dg-v~iwd~~~  281 (703)
                      .-.|+++.|+|.-. .+++++.|. |.+|...+
T Consensus       258 sHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~s  290 (370)
T KOG1007|consen  258 SHWVWAVRFNPEHDQLILSGGSDSAVNLSCASS  290 (370)
T ss_pred             ceEEEEEEecCccceEEEecCCCceeEEEeccc
Confidence            99999999999754 568999999 88887543

>KOG0650|consensus

Probab=99.56  E-value=1.2e-13  Score=144.21  Aligned_cols=270  Identities=13%  Similarity=0.201  Sum_probs=187.2

Q ss_pred             cceeeEEeeecccCCceEEecCC---ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCC----------
Q psy7108           5 GNVSLIETRETHEGGNVVLKLPG---VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWD----------   70 (703)
Q Consensus         5 g~~~~~~~~~~~~~~~~~i~~~~---v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~D----------   70 (703)
                      |+...++.+..+.++.++..-.+   +++|. .||.|+  ++.. ..+.|.|++|+|..+-..||.+-.+          
T Consensus       398 GHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcv--r~~~-~d~~I~~vaw~P~~~~~vLAvA~~~~~~ivnp~~G  474 (733)
T KOG0650|consen  398 GHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCV--RTVQ-FDSEIRSVAWNPLSDLCVLAVAVGECVLIVNPIFG  474 (733)
T ss_pred             ccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEE--EEEe-ecceeEEEEecCCCCceeEEEEecCceEEeCcccc
Confidence            44555555555555544444322   44554 499999  6655 3458999999994222344443222          


Q ss_pred             ----------------------CcEEEEEcCCCc----eeEEEecCCCcEEEEEEecCCCEEEEEECC---CeEEEEEcC
Q psy7108          71 ----------------------KTVKLWNAVETD----TQHETIQLLSDALCVAYKPDGTEIVVATLD---GQLIMFDVE  121 (703)
Q Consensus        71 ----------------------g~V~iWd~~~~~----~~~~~~~~~~~V~~v~~spdg~~las~s~d---g~I~vwd~~  121 (703)
                                            +.+..|.-....    .+...+.|...|..+.|+..|.+|++..-+   ..|.|.++.
T Consensus       475 ~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQLS  554 (733)
T KOG0650|consen  475 DRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQLS  554 (733)
T ss_pred             chhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEEEEecc
Confidence                                  222334322111    134556788899999999999999987654   457788876


Q ss_pred             CCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCcccc
Q psy7108         122 SAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDG  201 (703)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~  201 (703)
                      ......-|...                    .+.|.++.|+|...+|++++. ..|++||+.....++++.....     
T Consensus       555 K~~sQ~PF~ks--------------------kG~vq~v~FHPs~p~lfVaTq-~~vRiYdL~kqelvKkL~tg~k-----  608 (733)
T KOG0650|consen  555 KRKSQSPFRKS--------------------KGLVQRVKFHPSKPYLFVATQ-RSVRIYDLSKQELVKKLLTGSK-----  608 (733)
T ss_pred             cccccCchhhc--------------------CCceeEEEecCCCceEEEEec-cceEEEehhHHHHHHHHhcCCe-----
Confidence            55443333222                    347999999999988888875 6799999998777666543333     


Q ss_pred             ccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC-ccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEc
Q psy7108         202 INDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG-DMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSL  279 (703)
Q Consensus       202 ~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~-~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~  279 (703)
                         +|.+++.+|.|..+++++.+.      .+..+|+.-+ ++.+.+.-|...+++++|++.-..+|+|+.|| +.||.-
T Consensus       609 ---wiS~msihp~GDnli~gs~d~------k~~WfDldlsskPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg  679 (733)
T KOG0650|consen  609 ---WISSMSIHPNGDNLILGSYDK------KMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVFHG  679 (733)
T ss_pred             ---eeeeeeecCCCCeEEEecCCC------eeEEEEcccCcchhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEEee
Confidence               889999999999999988763      7778888755 55667778999999999999999999999999 777752


Q ss_pred             CC------Cceecce-------------eeeEEEccchhhhHhhcCCcceEEEE
Q psy7108         280 DS------GYVFDPF-------------LLDISITPQSVKEALADKDYAKALMM  314 (703)
Q Consensus       280 ~~------~~~~~~~-------------~~~~~~spd~~~~~l~sg~~~~~l~l  314 (703)
                      .-      .-.+-++             ++++.|+|..  ..|.+.+.++++++
T Consensus       680 ~VY~Dl~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~q--pWLfsAGAd~tirl  731 (733)
T KOG0650|consen  680 MVYNDLLQNPLIVPLKRLRGHEKTNDLGVLDTIWHPRQ--PWLFSAGADGTIRL  731 (733)
T ss_pred             eeehhhhcCCceEeeeeccCceeecccceEeecccCCC--ceEEecCCCceEEe
Confidence            21      1111111             3567899988  88999999999887

>KOG1034|consensus

Probab=99.55  E-value=7.3e-14  Score=136.23  Aligned_cols=241  Identities=12%  Similarity=0.141  Sum_probs=170.6

Q ss_pred             CCCcCeEEEEEcCCC--CCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCC-CEEEEEECCCeEEEEEcC
Q psy7108          45 GHEGPVSCIEFSPVL--SSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDG-TEIVVATLDGQLIMFDVE  121 (703)
Q Consensus        45 gH~~~V~~l~~sp~~--dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg-~~las~s~dg~I~vwd~~  121 (703)
                      .|.+....++|+-..  ...++|.|+.-|.|||.|+.+++......+|...|..+.+.|+. +++++++.|..|++|+++
T Consensus        87 d~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~  166 (385)
T KOG1034|consen   87 DHDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQ  166 (385)
T ss_pred             CCCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEecc
Confidence            478888889997621  14588888999999999999998888999999999999999986 688999999999999999


Q ss_pred             CCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEec-------
Q psy7108         122 SAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTIT-------  194 (703)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~-------  194 (703)
                      +..++..+-+-.                 +|.+.|.++.|+++|.+|++++.|.++++|++...+....++..       
T Consensus       167 ~~~Cv~VfGG~e-----------------gHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~  229 (385)
T KOG1034|consen  167 TDVCVAVFGGVE-----------------GHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNK  229 (385)
T ss_pred             CCeEEEEecccc-----------------cccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCC
Confidence            999998887643                 35669999999999999999999999999999843211111100       


Q ss_pred             -------------cCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCC-CCCcc-------------ceee
Q psy7108         195 -------------QNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGV-KKGDM-------------AARV  247 (703)
Q Consensus       195 -------------~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~-~~~~~-------------~~~~  247 (703)
                                   .-.+.+-|..+|.|+.|-.  .+++.-+.+      +.|..|.. +-++.             ...+
T Consensus       230 t~~pfpt~~~~fp~fst~diHrnyVDCvrw~g--d~ilSksce------naI~~w~pgkl~e~~~~vkp~es~~Ti~~~~  301 (385)
T KOG1034|consen  230 TTRPFPTPKTHFPDFSTTDIHRNYVDCVRWFG--DFILSKSCE------NAIVCWKPGKLEESIHNVKPPESATTILGEF  301 (385)
T ss_pred             ccCcCCccccccccccccccccchHHHHHHHh--hheeecccC------ceEEEEecchhhhhhhccCCCccceeeeeEe
Confidence                         0012334556677776653  455544433      37888865 21111             1122


Q ss_pred             cCCccceEEE--EEcCCCCEEEEEeCCC-EEEEEcCCCceecc----------eeeeEEEccchhhhHhhcCCcceEE
Q psy7108         248 LKPEVRVFCV--KFSPTGQAWVAATTEG-VHIYSLDSGYVFDP----------FLLDISITPQSVKEALADKDYAKAL  312 (703)
Q Consensus       248 ~~h~~~V~~l--~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~----------~~~~~~~spd~~~~~l~sg~~~~~l  312 (703)
                      .-....|+-+  +|.|-+++||.|...| |.+||++.......          .+.+.+|+.|+  ..|.....++++
T Consensus       302 ~~~~c~iWfirf~~d~~~~~la~gnq~g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~dg--s~lv~vcdd~~V  377 (385)
T KOG1034|consen  302 DYPMCDIWFIRFAFDPWQKMLALGNQSGKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSFSRDG--SILVLVCDDGTV  377 (385)
T ss_pred             ccCccceEEEEEeecHHHHHHhhccCCCcEEEEECCCCCCccCceEEeccccceeeeeeecccC--cEEEEEeCCCcE
Confidence            2234456655  5567789999999999 99999987665211          12557788888  444433444443

>KOG2919|consensus

Probab=99.54  E-value=2e-13  Score=132.84  Aligned_cols=231  Identities=16%  Similarity=0.213  Sum_probs=163.7

Q ss_pred             CcCeEEEEEc-------CCCCCCEEEEEeCCCcEEEEEcCCCceeEEEe--cCCCc---EEEEEEecCCCEEEEEECCCe
Q psy7108          47 EGPVSCIEFS-------PVLSSTGMVSASWDKTVKLWNAVETDTQHETI--QLLSD---ALCVAYKPDGTEIVVATLDGQ  114 (703)
Q Consensus        47 ~~~V~~l~~s-------p~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~--~~~~~---V~~v~~spdg~~las~s~dg~  114 (703)
                      .+.|...+|-       |  +..++++.+.|.-|++||..+++......  .|.+.   ..+++|+|||.+|++| ....
T Consensus       104 g~tvydy~wYs~M~s~qP--~t~l~a~ssr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaG-ykrc  180 (406)
T KOG2919|consen  104 GETVYDYCWYSRMKSDQP--STNLFAVSSRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAG-YKRC  180 (406)
T ss_pred             CCEEEEEEeeeccccCCC--ccceeeeccccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeec-ccce
Confidence            3567888885       5  67899999999999999998886443332  24443   5689999999999876 5789


Q ss_pred             EEEEEc-CCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC-CCCEEEEEecCCcEEEEECCCCceEEEEE
Q psy7108         115 LIMFDV-ESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA-DGSCILAAGQSKYICIYSSREGILLKKFT  192 (703)
Q Consensus       115 I~vwd~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp-dg~~l~s~s~dg~I~lwD~~~~~~~~~~~  192 (703)
                      |+++|+ +.|..-......             .....+..+-+.+++|+| +.+.+++++...++-||.-..+.++..+-
T Consensus       181 irvFdt~RpGr~c~vy~t~-------------~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llg  247 (406)
T KOG2919|consen  181 IRVFDTSRPGRDCPVYTTV-------------TKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLG  247 (406)
T ss_pred             EEEeeccCCCCCCcchhhh-------------hcccccccceeeeeeccCCCCcceeeecccceeeeEecCCCCceeeec
Confidence            999999 555422111110             000112234689999999 55688999988888888888788877766


Q ss_pred             eccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC-ccceeecCCcc-ceE--EEEEcCCCCEEEE
Q psy7108         193 ITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG-DMAARVLKPEV-RVF--CVKFSPTGQAWVA  268 (703)
Q Consensus       193 ~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~-~~~~~~~~h~~-~V~--~l~~spdg~~l~s  268 (703)
                      ++.+        .|+.+.|.++|+.+++++..+     -.|-.||++.. +++..+..|.. .=.  -....|+|++|++
T Consensus       248 gh~g--------GvThL~~~edGn~lfsGaRk~-----dkIl~WDiR~~~~pv~~L~rhv~~TNQRI~FDld~~~~~Las  314 (406)
T KOG2919|consen  248 GHGG--------GVTHLQWCEDGNKLFSGARKD-----DKILCWDIRYSRDPVYALERHVGDTNQRILFDLDPKGEILAS  314 (406)
T ss_pred             ccCC--------CeeeEEeccCcCeecccccCC-----CeEEEEeehhccchhhhhhhhccCccceEEEecCCCCceeec
Confidence            5544        899999999999999888654     36899999864 56666666644 222  3455799999999


Q ss_pred             EeCCC-EEEEEcCC-Cceecce------eeeEEEccchhhhHhhcCCc
Q psy7108         269 ATTEG-VHIYSLDS-GYVFDPF------LLDISITPQSVKEALADKDY  308 (703)
Q Consensus       269 ~s~Dg-v~iwd~~~-~~~~~~~------~~~~~~spd~~~~~l~sg~~  308 (703)
                      |+.|| |++||++. +.....+      ...++++|--  .++++.+-
T Consensus       315 G~tdG~V~vwdlk~~gn~~sv~~~~sd~vNgvslnP~m--pilatssG  360 (406)
T KOG2919|consen  315 GDTDGSVRVWDLKDLGNEVSVTGNYSDTVNGVSLNPIM--PILATSSG  360 (406)
T ss_pred             cCCCccEEEEecCCCCCcccccccccccccceecCccc--ceeeeccC
Confidence            99999 99999987 4422222      2346777754  55555443

>KOG2110|consensus

Probab=99.54  E-value=1.2e-12  Score=129.95  Aligned_cols=234  Identities=14%  Similarity=0.170  Sum_probs=176.4

Q ss_pred             CcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECC--CeEEEEEcCCCc
Q psy7108          47 EGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLD--GQLIMFDVESAA  124 (703)
Q Consensus        47 ~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~d--g~I~vwd~~~~~  124 (703)
                      ...++.+.|+.  +...|..|+.||. ++++.+...+..........|.-+-|+  ..++|..+.+  +.+++++.+.+.
T Consensus         5 ~~ti~~~~~Nq--d~~~lsvGs~~Gy-k~~~~~~~~k~~~~~~~~~~IvEmLFS--SSLvaiV~~~qpr~Lkv~~~Kk~~   79 (391)
T KOG2110|consen    5 KPTINFIGFNQ--DSTLLSVGSKDGY-KIFSCSPFEKCFSKDTEGVSIVEMLFS--SSLVAIVSIKQPRKLKVVHFKKKT   79 (391)
T ss_pred             Ccceeeeeecc--ceeEEEccCCCce-eEEecCchHHhhcccCCCeEEEEeecc--cceeEEEecCCCceEEEEEcccCc
Confidence            45677788998  8999999999984 788876554422222233345556666  4566666554  359999998888


Q ss_pred             EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccc
Q psy7108         125 QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGIND  204 (703)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~  204 (703)
                      .+..+.-..                     .|.++.++.  +.|+++-.+. |+|||+++.+.+.++.....     ...
T Consensus        80 ~ICe~~fpt---------------------~IL~VrmNr--~RLvV~Lee~-IyIydI~~MklLhTI~t~~~-----n~~  130 (391)
T KOG2110|consen   80 TICEIFFPT---------------------SILAVRMNR--KRLVVCLEES-IYIYDIKDMKLLHTIETTPP-----NPK  130 (391)
T ss_pred             eEEEEecCC---------------------ceEEEEEcc--ceEEEEEccc-EEEEecccceeehhhhccCC-----Ccc
Confidence            877766544                     688888875  4566665544 99999999999888764422     112


Q ss_pred             cceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC--EEEEEcCCC
Q psy7108         205 FINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG--VHIYSLDSG  282 (703)
Q Consensus       205 ~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg--v~iwd~~~~  282 (703)
                      .+..+++++.+.++++.++..  .  +.|.+||..+-+.+..+..|++.+.+++|+|+|..|||+++.|  ||||.+.+|
T Consensus       131 gl~AlS~n~~n~ylAyp~s~t--~--GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G  206 (391)
T KOG2110|consen  131 GLCALSPNNANCYLAYPGSTT--S--GDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEG  206 (391)
T ss_pred             ceEeeccCCCCceEEecCCCC--C--ceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCc
Confidence            334444555556888765442  2  3799999999999999999999999999999999999999999  899999999


Q ss_pred             ceeccee--------eeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108         283 YVFDPFL--------LDISITPQSVKEALADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       283 ~~~~~~~--------~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~  321 (703)
                      +.+..|.        .+++|+|++  .+|...+..+++.+ +++++.
T Consensus       207 ~kl~eFRRG~~~~~IySL~Fs~ds--~~L~~sS~TeTVHi-FKL~~~  250 (391)
T KOG2110|consen  207 QKLYEFRRGTYPVSIYSLSFSPDS--QFLAASSNTETVHI-FKLEKV  250 (391)
T ss_pred             cEeeeeeCCceeeEEEEEEECCCC--CeEEEecCCCeEEE-EEeccc
Confidence            9987775        469999999  89999999999998 888754

>KOG1587|consensus

Probab=99.53  E-value=9.4e-13  Score=143.83  Aligned_cols=254  Identities=15%  Similarity=0.186  Sum_probs=178.9

Q ss_pred             CCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCce--e----EEEecCCCcEEEEEEecCCC--EEEEEECCCeEEE
Q psy7108          46 HEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDT--Q----HETIQLLSDALCVAYKPDGT--EIVVATLDGQLIM  117 (703)
Q Consensus        46 H~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~--~----~~~~~~~~~V~~v~~spdg~--~las~s~dg~I~v  117 (703)
                      -..+|+|+.|+|. +.++++.|+.+|.|.+||+..+..  .    .....|..++..+.|..+-.  -+++++.||.|..
T Consensus       241 ~~s~v~~~~f~p~-~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~  319 (555)
T KOG1587|consen  241 SPSEVTCLKFCPF-DPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICS  319 (555)
T ss_pred             cCCceeEEEeccC-CcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccCCCCceEEEecCCcEee
Confidence            4688999999997 889999999999999999987654  1    22234888999999976544  4999999999999


Q ss_pred             EEcCCCcE-EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC-CCCEEEEEecCCcEEEEECCCCceE--EEEEe
Q psy7108         118 FDVESAAQ-VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA-DGSCILAAGQSKYICIYSSREGILL--KKFTI  193 (703)
Q Consensus       118 wd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp-dg~~l~s~s~dg~I~lwD~~~~~~~--~~~~~  193 (703)
                      |+++.-.. .........         ............+++++|.+ +-..+++|+.+|.|.--+-...+.-  ..++.
T Consensus       320 W~~~~l~~P~e~~~~~~~---------~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~  390 (555)
T KOG1587|consen  320 WDTDMLSLPVEGLLLESK---------KHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKG  390 (555)
T ss_pred             eeccccccchhhcccccc---------cccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCcccccccccc
Confidence            98865432 111111100         00111112233689999988 4577889999998876332222111  22222


Q ss_pred             ccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC-CCccceeecCCccceEEEEEcCCCCE-EEEEeC
Q psy7108         194 TQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK-KGDMAARVLKPEVRVFCVKFSPTGQA-WVAATT  271 (703)
Q Consensus       194 ~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~-~~~~~~~~~~h~~~V~~l~~spdg~~-l~s~s~  271 (703)
                      +.  ....|...|..+.++|.+..++.++++.      .++||... ...++..+..+...|++++|||.... |+++..
T Consensus       391 ~~--~~~~h~g~v~~v~~nPF~~k~fls~gDW------~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~~~d~  462 (555)
T KOG1587|consen  391 HS--TFITHIGPVYAVSRNPFYPKNFLSVGDW------TVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFATVDG  462 (555)
T ss_pred             cc--cccccCcceEeeecCCCccceeeeeccc------eeEeccccCCCCcchhhhhccceeeeeEEcCcCceEEEEEcC
Confidence            22  2334567999999999998877777653      89999877 56667677777778999999998765 578888


Q ss_pred             CC-EEEEEcCCCceec--------ceeeeEEEccchhhhHhhcCCcceEEEEEEecCc
Q psy7108         272 EG-VHIYSLDSGYVFD--------PFLLDISITPQSVKEALADKDYAKALMMSLKLNE  320 (703)
Q Consensus       272 Dg-v~iwd~~~~~~~~--------~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~  320 (703)
                      || +.+||+.....-.        .....+.+++.+  ..++.|++.+.+.+ +++.+
T Consensus       463 ~G~l~iWDLl~~~~~Pv~s~~~~~~~l~~~~~s~~g--~~lavGd~~G~~~~-~~l~~  517 (555)
T KOG1587|consen  463 DGNLDIWDLLQDDEEPVLSQKVCSPALTRVRWSPNG--KLLAVGDANGTTHI-LKLSE  517 (555)
T ss_pred             CCceehhhhhccccCCcccccccccccceeecCCCC--cEEEEecCCCcEEE-EEcCc
Confidence            99 9999986543321        122346777878  89999999999888 77753

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.52  E-value=2.5e-12  Score=141.17  Aligned_cols=215  Identities=15%  Similarity=0.244  Sum_probs=148.6

Q ss_pred             ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCC---CcEEEEEcCCCceeEEEecCCCcEEEEEEecCCC
Q psy7108          28 VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWD---KTVKLWNAVETDTQHETIQLLSDALCVAYKPDGT  104 (703)
Q Consensus        28 v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~D---g~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~  104 (703)
                      +.++|.+|...  +.+..|...+.+.+|+|  ||+.|+.++.+   ..|.+||+.++.. ..+....+...+.+|+|||+
T Consensus       186 l~i~D~~g~~~--~~lt~~~~~v~~p~wSp--Dg~~la~~s~~~~~~~l~~~dl~~g~~-~~l~~~~g~~~~~~~SpDG~  260 (433)
T PRK04922        186 LQVADSDGYNP--QTILRSAEPILSPAWSP--DGKKLAYVSFERGRSAIYVQDLATGQR-ELVASFRGINGAPSFSPDGR  260 (433)
T ss_pred             EEEECCCCCCc--eEeecCCCccccccCCC--CCCEEEEEecCCCCcEEEEEECCCCCE-EEeccCCCCccCceECCCCC
Confidence            44677777766  77888888999999999  99999988743   4689999977643 33444555566889999999


Q ss_pred             EEEE-EECCC--eEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec-CCc--EE
Q psy7108         105 EIVV-ATLDG--QLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ-SKY--IC  178 (703)
Q Consensus       105 ~las-~s~dg--~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~-dg~--I~  178 (703)
                      .|+. .+.++  .|++||+.+++... +..+..                    .....+|+|||+.|+.++. ++.  |+
T Consensus       261 ~l~~~~s~~g~~~Iy~~d~~~g~~~~-lt~~~~--------------------~~~~~~~spDG~~l~f~sd~~g~~~iy  319 (433)
T PRK04922        261 RLALTLSRDGNPEIYVMDLGSRQLTR-LTNHFG--------------------IDTEPTWAPDGKSIYFTSDRGGRPQIY  319 (433)
T ss_pred             EEEEEEeCCCCceEEEEECCCCCeEE-CccCCC--------------------CccceEECCCCCEEEEEECCCCCceEE
Confidence            8764 45555  59999998886533 332221                    3456899999999887763 444  77


Q ss_pred             EEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEE
Q psy7108         179 IYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVK  258 (703)
Q Consensus       179 lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~  258 (703)
                      ++|+.+++..+ +....        .....++|+|||+.+++....   ++...|.+||+.+++... +. +........
T Consensus       320 ~~dl~~g~~~~-lt~~g--------~~~~~~~~SpDG~~Ia~~~~~---~~~~~I~v~d~~~g~~~~-Lt-~~~~~~~p~  385 (433)
T PRK04922        320 RVAASGGSAER-LTFQG--------NYNARASVSPDGKKIAMVHGS---GGQYRIAVMDLSTGSVRT-LT-PGSLDESPS  385 (433)
T ss_pred             EEECCCCCeEE-eecCC--------CCccCEEECCCCCEEEEEECC---CCceeEEEEECCCCCeEE-CC-CCCCCCCce
Confidence            77877765432 22111        133468999999999887653   223579999998876543 22 222345679


Q ss_pred             EcCCCCEEEEEeCCC----EEEEEcCCC
Q psy7108         259 FSPTGQAWVAATTEG----VHIYSLDSG  282 (703)
Q Consensus       259 ~spdg~~l~s~s~Dg----v~iwd~~~~  282 (703)
                      |+|||++++..+.++    +.+++++.+
T Consensus       386 ~spdG~~i~~~s~~~g~~~L~~~~~~g~  413 (433)
T PRK04922        386 FAPNGSMVLYATREGGRGVLAAVSTDGR  413 (433)
T ss_pred             ECCCCCEEEEEEecCCceEEEEEECCCC
Confidence            999999987666542    667777543

>KOG1445|consensus

Probab=99.52  E-value=7e-14  Score=146.26  Aligned_cols=207  Identities=12%  Similarity=0.155  Sum_probs=152.5

Q ss_pred             CcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc-------eeEEEecCCCcEEEEEEecCC-CEEEEEECCCeEEEE
Q psy7108          47 EGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD-------TQHETIQLLSDALCVAYKPDG-TEIVVATLDGQLIMF  118 (703)
Q Consensus        47 ~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~-------~~~~~~~~~~~V~~v~~spdg-~~las~s~dg~I~vw  118 (703)
                      ...|+.+.|.|. |...||.+++||.|++|.+..+.       ....+..|.+.|+++.|+|-. ..|++++.|-+|++|
T Consensus       627 gt~vtDl~WdPF-D~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lW  705 (1012)
T KOG1445|consen  627 GTLVTDLHWDPF-DDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELW  705 (1012)
T ss_pred             CceeeecccCCC-ChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeee
Confidence            467999999998 89999999999999999997654       234556799999999999954 578999999999999


Q ss_pred             EcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCce-EEEEEeccCC
Q psy7108         119 DVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGIL-LKKFTITQNK  197 (703)
Q Consensus       119 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~-~~~~~~~~~~  197 (703)
                      |+.+++....+.+|.+                    .|..++|||||+.+++.+.||+|++|..+++.. +..-.+..+ 
T Consensus       706 Dl~~~~~~~~l~gHtd--------------------qIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~pv~Eg~gpvg-  764 (1012)
T KOG1445|consen  706 DLANAKLYSRLVGHTD--------------------QIFGIAWSPDGRRIATVCKDGTLRVYEPRSREQPVYEGKGPVG-  764 (1012)
T ss_pred             ehhhhhhhheeccCcC--------------------ceeEEEECCCCcceeeeecCceEEEeCCCCCCCccccCCCCcc-
Confidence            9999999888988876                    899999999999999999999999999987642 222111111 


Q ss_pred             ccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCc--cceeec-CCccceEEEEEcCCCCEE-EEEeCCC
Q psy7108         198 SLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGD--MAARVL-KPEVRVFCVKFSPTGQAW-VAATTEG  273 (703)
Q Consensus       198 ~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~--~~~~~~-~h~~~V~~l~~spdg~~l-~s~s~Dg  273 (703)
                            ..--.+.|.-||+++++.+-+.  ...+.|.+||..+-.  .+.... .-.-.+.--.+.+|.+.| ++|-.|.
T Consensus       765 ------tRgARi~wacdgr~viv~Gfdk--~SeRQv~~Y~Aq~l~~~pl~t~~lDvaps~LvP~YD~Ds~~lfltGKGD~  836 (1012)
T KOG1445|consen  765 ------TRGARILWACDGRIVIVVGFDK--SSERQVQMYDAQTLDLRPLYTQVLDVAPSPLVPHYDYDSNVLFLTGKGDR  836 (1012)
T ss_pred             ------CcceeEEEEecCcEEEEecccc--cchhhhhhhhhhhccCCcceeeeecccCccccccccCCCceEEEecCCCc
Confidence                  2335678889999988877653  233678889876532  221111 000011112345566554 6777777


Q ss_pred             -EEEEEcCCCc
Q psy7108         274 -VHIYSLDSGY  283 (703)
Q Consensus       274 -v~iwd~~~~~  283 (703)
                       |.+|.+-...
T Consensus       837 ~v~~yEv~~es  847 (1012)
T KOG1445|consen  837 FVNMYEVIYES  847 (1012)
T ss_pred             eEEEEEecCCC
Confidence             8999875443

>KOG1009|consensus

Probab=99.52  E-value=7.3e-14  Score=139.86  Aligned_cols=165  Identities=12%  Similarity=0.257  Sum_probs=123.4

Q ss_pred             CcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCce---------eEEEecCCCcEEEEEEecCCCEEEEEECCCeEEE
Q psy7108          47 EGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDT---------QHETIQLLSDALCVAYKPDGTEIVVATLDGQLIM  117 (703)
Q Consensus        47 ~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~---------~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~v  117 (703)
                      ..+|.++.|.++ +.+.|+||+.|..|++|-+.....         ...+..|...|+++.|+|+|..||+|+.+|.|.+
T Consensus        13 ~~pv~s~dfq~n-~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~l   91 (434)
T KOG1009|consen   13 HEPVYSVDFQKN-SLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFL   91 (434)
T ss_pred             CCceEEEEeccC-cccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEE
Confidence            478999999994 445999999999999998754321         1233458999999999999999999999999999


Q ss_pred             EEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCC
Q psy7108         118 FDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNK  197 (703)
Q Consensus       118 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~  197 (703)
                      |-...-...   ..... ................|...+..++|+||+.++++++.|+.+++||+..|.....+..|.+ 
T Consensus        92 Wk~~~~~~~---~~d~e-~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~-  166 (434)
T KOG1009|consen   92 WKQGDVRIF---DADTE-ADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILDDHEH-  166 (434)
T ss_pred             EEecCcCCc---cccch-hhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccceeEeecccccc-
Confidence            976531110   00000 0000111122223345677899999999999999999999999999999999888766555 


Q ss_pred             ccccccccceeeeeccCCCEEEEEccc
Q psy7108         198 SLDGINDFINRRKMTEFGNVSLIETRE  224 (703)
Q Consensus       198 ~~~~~~~~v~~~~~spdg~~l~~~~~~  224 (703)
                             .+..++|.|-+++++.-+.+
T Consensus       167 -------yvqgvawDpl~qyv~s~s~d  186 (434)
T KOG1009|consen  167 -------YVQGVAWDPLNQYVASKSSD  186 (434)
T ss_pred             -------ccceeecchhhhhhhhhccC
Confidence                   88999999999988775554

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.52  E-value=2.3e-12  Score=141.69  Aligned_cols=214  Identities=14%  Similarity=0.160  Sum_probs=149.0

Q ss_pred             eeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeC---CCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEE
Q psy7108          30 KGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASW---DKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEI  106 (703)
Q Consensus        30 ~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~---Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~l  106 (703)
                      ++|.+|...  +.+..|...+.+.+|+|  ||+.|+..+.   +..|.+||+.++. ...+..+.+.+.+.+|+|||+.|
T Consensus       186 ~~d~dg~~~--~~lt~~~~~v~~p~wSp--DG~~lay~s~~~g~~~i~~~dl~~g~-~~~l~~~~g~~~~~~~SPDG~~l  260 (435)
T PRK05137        186 IMDQDGANV--RYLTDGSSLVLTPRFSP--NRQEITYMSYANGRPRVYLLDLETGQ-RELVGNFPGMTFAPRFSPDGRKV  260 (435)
T ss_pred             EECCCCCCc--EEEecCCCCeEeeEECC--CCCEEEEEEecCCCCEEEEEECCCCc-EEEeecCCCcccCcEECCCCCEE
Confidence            566677776  78889999999999999  9999988764   4689999998774 34455567778889999999987


Q ss_pred             EE-EECCCe--EEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec-CC--cEEEE
Q psy7108         107 VV-ATLDGQ--LIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ-SK--YICIY  180 (703)
Q Consensus       107 as-~s~dg~--I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~-dg--~I~lw  180 (703)
                      +. .+.++.  |++||+.+++... +..+..                    .....+|+|||+.|+..+. ++  .|+++
T Consensus       261 a~~~~~~g~~~Iy~~d~~~~~~~~-Lt~~~~--------------------~~~~~~~spDG~~i~f~s~~~g~~~Iy~~  319 (435)
T PRK05137        261 VMSLSQGGNTDIYTMDLRSGTTTR-LTDSPA--------------------IDTSPSYSPDGSQIVFESDRSGSPQLYVM  319 (435)
T ss_pred             EEEEecCCCceEEEEECCCCceEE-ccCCCC--------------------ccCceeEcCCCCEEEEEECCCCCCeEEEE
Confidence            64 445554  8888998776543 332221                    3556899999999887663 33  68888


Q ss_pred             ECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEc
Q psy7108         181 SSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFS  260 (703)
Q Consensus       181 D~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~s  260 (703)
                      |+.++.... +....        ..+....|+|||+.+++....+   +...+.+||+.++.. ..+. ....+....|+
T Consensus       320 d~~g~~~~~-lt~~~--------~~~~~~~~SpdG~~ia~~~~~~---~~~~i~~~d~~~~~~-~~lt-~~~~~~~p~~s  385 (435)
T PRK05137        320 NADGSNPRR-ISFGG--------GRYSTPVWSPRGDLIAFTKQGG---GQFSIGVMKPDGSGE-RILT-SGFLVEGPTWA  385 (435)
T ss_pred             ECCCCCeEE-eecCC--------CcccCeEECCCCCEEEEEEcCC---CceEEEEEECCCCce-Eecc-CCCCCCCCeEC
Confidence            987765433 32111        1445678999999998876432   235788889765543 2222 22346788999


Q ss_pred             CCCCEEEEEeCC------C-EEEEEcCCCc
Q psy7108         261 PTGQAWVAATTE------G-VHIYSLDSGY  283 (703)
Q Consensus       261 pdg~~l~s~s~D------g-v~iwd~~~~~  283 (703)
                      |||+.++..+.+      . +.+++++.+.
T Consensus       386 pDG~~i~~~~~~~~~~~~~~L~~~dl~g~~  415 (435)
T PRK05137        386 PNGRVIMFFRQTPGSGGAPKLYTVDLTGRN  415 (435)
T ss_pred             CCCCEEEEEEccCCCCCcceEEEEECCCCc
Confidence            999998665442      2 5666765543

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.51  E-value=4.2e-12  Score=134.58  Aligned_cols=265  Identities=9%  Similarity=0.094  Sum_probs=164.0

Q ss_pred             cCCceEEecCCceeeccCCC--ccccccccCCCcCeEEEEEcCCCCCCEEEEEe-CCCcEEEEEcCCCcee--EEEecCC
Q psy7108          17 EGGNVVLKLPGVKKGDMAAR--VLKPEVLSGHEGPVSCIEFSPVLSSTGMVSAS-WDKTVKLWNAVETDTQ--HETIQLL   91 (703)
Q Consensus        17 ~~~~~~i~~~~v~~~d~tg~--~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs-~Dg~V~iWd~~~~~~~--~~~~~~~   91 (703)
                      +..+..|.+|++.   .+|+  ++  +++. +.+....++++|  ++++|+.++ .++.|.+|++......  .......
T Consensus         8 ~~~~~~I~~~~~~---~~g~l~~~--~~~~-~~~~~~~l~~sp--d~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~~~   79 (330)
T PRK11028          8 SPESQQIHVWNLN---HEGALTLL--QVVD-VPGQVQPMVISP--DKRHLYVGVRPEFRVLSYRIADDGALTFAAESPLP   79 (330)
T ss_pred             cCCCCCEEEEEEC---CCCceeee--eEEe-cCCCCccEEECC--CCCEEEEEECCCCcEEEEEECCCCceEEeeeecCC
Confidence            3344556666553   1243  33  4454 345677899999  999887664 5788999999733222  2222344


Q ss_pred             CcEEEEEEecCCCEEEEEEC-CCeEEEEEcCCCc----EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCC
Q psy7108          92 SDALCVAYKPDGTEIVVATL-DGQLIMFDVESAA----QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGS  166 (703)
Q Consensus        92 ~~V~~v~~spdg~~las~s~-dg~I~vwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~  166 (703)
                      +....++++|+++.+++++. ++.|.+|++++..    .+..+.+.                     .....++++|+++
T Consensus        80 ~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~---------------------~~~~~~~~~p~g~  138 (330)
T PRK11028         80 GSPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIEGL---------------------EGCHSANIDPDNR  138 (330)
T ss_pred             CCceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeeccCC---------------------CcccEeEeCCCCC
Confidence            46778999999999888765 7899999997422    12212111                     1356788999999


Q ss_pred             EEEEEe-cCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCC--Cc-
Q psy7108         167 CILAAG-QSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKK--GD-  242 (703)
Q Consensus       167 ~l~s~s-~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~--~~-  242 (703)
                      ++++++ .++.|.+||+.+...+............  ......++|+|+|+++++....+     ..|.+|++..  ++ 
T Consensus       139 ~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~--g~~p~~~~~~pdg~~lyv~~~~~-----~~v~v~~~~~~~~~~  211 (330)
T PRK11028        139 TLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVE--GAGPRHMVFHPNQQYAYCVNELN-----SSVDVWQLKDPHGEI  211 (330)
T ss_pred             EEEEeeCCCCEEEEEEECCCCcccccCCCceecCC--CCCCceEEECCCCCEEEEEecCC-----CEEEEEEEeCCCCCE
Confidence            987654 5689999999863322110000000000  12456789999999998876532     4899998873  32 


Q ss_pred             -cceeecC------CccceEEEEEcCCCCEEEEEeC-CC-EEEEEcCCCc-e---ecc-----eeeeEEEccchhhhHhh
Q psy7108         243 -MAARVLK------PEVRVFCVKFSPTGQAWVAATT-EG-VHIYSLDSGY-V---FDP-----FLLDISITPQSVKEALA  304 (703)
Q Consensus       243 -~~~~~~~------h~~~V~~l~~spdg~~l~s~s~-Dg-v~iwd~~~~~-~---~~~-----~~~~~~~spd~~~~~l~  304 (703)
                       ....+..      +......+.++|+|++++++.. ++ |.+|+++... .   ...     ....+.++|++  ..+.
T Consensus       212 ~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~~~~p~~~~~~~dg--~~l~  289 (330)
T PRK11028        212 ECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPTETQPRGFNIDHSG--KYLI  289 (330)
T ss_pred             EEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEeccccCCceEECCCC--CEEE
Confidence             2222221      1112346889999999988765 44 9999986432 1   111     12468899999  4444


Q ss_pred             c-CCcceEEEEEEecCc
Q psy7108         305 D-KDYAKALMMSLKLNE  320 (703)
Q Consensus       305 s-g~~~~~l~la~~l~~  320 (703)
                      . ...++.+.+ |+++.
T Consensus       290 va~~~~~~v~v-~~~~~  305 (330)
T PRK11028        290 AAGQKSHHISV-YEIDG  305 (330)
T ss_pred             EEEccCCcEEE-EEEcC
Confidence            3 334667776 77653

>KOG1310|consensus

Probab=99.50  E-value=3e-13  Score=139.76  Aligned_cols=231  Identities=17%  Similarity=0.210  Sum_probs=151.1

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEE-ecCCCcEEEEEEecC--CCEEEEEECCCeEEE
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHET-IQLLSDALCVAYKPD--GTEIVVATLDGQLIM  117 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~-~~~~~~V~~v~~spd--g~~las~s~dg~I~v  117 (703)
                      ..|+||++.|+|++|+.  +|.+|+|||+|-.+.|||....+....+ .+|...|.++.|-|.  ++.+++|..|..|++
T Consensus        44 ~eL~GH~GCVN~LeWn~--dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~l  121 (758)
T KOG1310|consen   44 AELTGHTGCVNCLEWNA--DGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKL  121 (758)
T ss_pred             hhhccccceecceeecC--CCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEE
Confidence            56889999999999999  9999999999999999999766544443 359999999999984  568899999999999


Q ss_pred             EEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCC-CEEEEEecCCcEEEEECCCCceEE-EEEecc
Q psy7108         118 FDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADG-SCILAAGQSKYICIYSSREGILLK-KFTITQ  195 (703)
Q Consensus       118 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg-~~l~s~s~dg~I~lwD~~~~~~~~-~~~~~~  195 (703)
                      +|+...+.-..-.+..          ....--.-|...|..++-.|++ ..+.+++.||+|+-||++...... ....+.
T Consensus       122 fdl~~~~~~~~d~~~~----------~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~  191 (758)
T KOG1310|consen  122 FDLDSSKEGGMDHGME----------ETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPS  191 (758)
T ss_pred             EecccccccccccCcc----------chhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccH
Confidence            9998532211000000          0000111234478888989988 788899999999999998742211 100000


Q ss_pred             -CCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC--------c----------cceeec-CCc----
Q psy7108         196 -NKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG--------D----------MAARVL-KPE----  251 (703)
Q Consensus       196 -~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~--------~----------~~~~~~-~h~----  251 (703)
                       -..+....-...++.++|...++++.+..+     ...++||.+..        .          ++..+. +|-    
T Consensus       192 ~l~ny~~~lielk~ltisp~rp~~laVGgsd-----pfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~  266 (758)
T KOG1310|consen  192 ILVNYNPQLIELKCLTISPSRPYYLAVGGSD-----PFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQ  266 (758)
T ss_pred             HHHHhchhhheeeeeeecCCCCceEEecCCC-----chhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCcc
Confidence             000111112456889999877555444332     36788884321        0          111111 121    


Q ss_pred             -------cceEEEEEcCCCCEE-EEEeCCCEEEEEcCCCceecce
Q psy7108         252 -------VRVFCVKFSPTGQAW-VAATTEGVHIYSLDSGYVFDPF  288 (703)
Q Consensus       252 -------~~V~~l~~spdg~~l-~s~s~Dgv~iwd~~~~~~~~~~  288 (703)
                             ..++-+.|+|+|..| ++-+.+.|+++++..++...++
T Consensus       267 gn~~~~~~~~t~vtfnpNGtElLvs~~gEhVYlfdvn~~~~~~~y  311 (758)
T KOG1310|consen  267 GNLDRYITCCTYVTFNPNGTELLVSWGGEHVYLFDVNEDKSPTPY  311 (758)
T ss_pred             cccccceeeeEEEEECCCCcEEEEeeCCeEEEEEeecCCCCceee
Confidence                   125668999999876 4445455999999887765444

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.50  E-value=1.6e-11  Score=132.50  Aligned_cols=220  Identities=20%  Similarity=0.385  Sum_probs=169.6

Q ss_pred             CceeeccCCC--ccccccccCCC-cCeEEEEE-cCCCCCC-EEEEEeC-CCcEEEEEcCC-CceeEEEecCCCcEEEEEE
Q psy7108          27 GVKKGDMAAR--VLKPEVLSGHE-GPVSCIEF-SPVLSST-GMVSASW-DKTVKLWNAVE-TDTQHETIQLLSDALCVAY   99 (703)
Q Consensus        27 ~v~~~d~tg~--~~~~~~l~gH~-~~V~~l~~-sp~~dg~-~L~sgs~-Dg~V~iWd~~~-~~~~~~~~~~~~~V~~v~~   99 (703)
                      .+..|+....  ..  ..+.++. ..+..+.+ ++  ++. .++..+. |+.+++|+... .........|...|.+++|
T Consensus        88 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  163 (466)
T COG2319          88 TIKLWDLDNGEKLI--KSLEGLHDSSVSKLALSSP--DGNSILLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAF  163 (466)
T ss_pred             cEEEEEcCCCceeE--EEEeccCCCceeeEEEECC--CcceEEeccCCCCccEEEEEecCCCeEEEEEecCcccEEEEEE
Confidence            3666775544  45  6666644 37888888 77  777 5555444 99999999987 5567777889999999999


Q ss_pred             ecCCCEEEEEEC-CCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCC-EEEEEecCCcE
Q psy7108         100 KPDGTEIVVATL-DGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGS-CILAAGQSKYI  177 (703)
Q Consensus       100 spdg~~las~s~-dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~-~l~s~s~dg~I  177 (703)
                      +|++..+++++. |+.+++|++.++..+..+.+|..                    .|.+++|+|++. .+++++.|+.|
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~v~~~~~~~~~~~~~~~~~~d~~i  223 (466)
T COG2319         164 SPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTD--------------------PVSSLAFSPDGGLLIASGSSDGTI  223 (466)
T ss_pred             CCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCC--------------------ceEEEEEcCCcceEEEEecCCCcE
Confidence            999998888885 99999999999888888877654                    899999999998 55555899999


Q ss_pred             EEEECCCCceEE-EEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcc-ceeecCCccceE
Q psy7108         178 CIYSSREGILLK-KFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDM-AARVLKPEVRVF  255 (703)
Q Consensus       178 ~lwD~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~-~~~~~~h~~~V~  255 (703)
                      .+||...+.... .+..+..        .. ...|++++..++.++.+      ..+++|+...... ......|...+.
T Consensus       224 ~~wd~~~~~~~~~~~~~~~~--------~~-~~~~~~~~~~~~~~~~d------~~~~~~~~~~~~~~~~~~~~~~~~v~  288 (466)
T COG2319         224 RLWDLSTGKLLRSTLSGHSD--------SV-VSSFSPDGSLLASGSSD------GTIRLWDLRSSSSLLRTLSGHSSSVL  288 (466)
T ss_pred             EEEECCCCcEEeeecCCCCc--------ce-eEeECCCCCEEEEecCC------CcEEEeeecCCCcEEEEEecCCccEE
Confidence            999988777766 3443332        32 22899999766655544      3899999987654 444467888999


Q ss_pred             EEEEcCCCCEEEEEeCCC-EEEEEcCCCcee
Q psy7108         256 CVKFSPTGQAWVAATTEG-VHIYSLDSGYVF  285 (703)
Q Consensus       256 ~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~  285 (703)
                      ++.|+|++..+++++.|+ +.+|+..+....
T Consensus       289 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~  319 (466)
T COG2319         289 SVAFSPDGKLLASGSSDGTVRLWDLETGKLL  319 (466)
T ss_pred             EEEECCCCCEEEEeeCCCcEEEEEcCCCceE
Confidence            999999999998888888 999988776543

>KOG1524|consensus

Probab=99.49  E-value=4.2e-13  Score=138.29  Aligned_cols=213  Identities=12%  Similarity=0.171  Sum_probs=160.9

Q ss_pred             CCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCC
Q psy7108          61 STGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRL  140 (703)
Q Consensus        61 g~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~  140 (703)
                      .+.++.++.||.+.+-+- .+.....+..|.+.+.|-.|+|||.-|++++.||.|++|.- +|-...++...        
T Consensus        75 ~d~~~i~s~DGkf~il~k-~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSr-sGMLRStl~Q~--------  144 (737)
T KOG1524|consen   75 SDTLLICSNDGRFVILNK-SARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSR-SGMLRSTVVQN--------  144 (737)
T ss_pred             cceEEEEcCCceEEEecc-cchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEec-cchHHHHHhhc--------
Confidence            457888999999988773 44445566679999999999999999999999999999984 45433332222        


Q ss_pred             CCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEE
Q psy7108         141 DTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLI  220 (703)
Q Consensus       141 ~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~  220 (703)
                                  ..+|.|++|.|+.+.++.|.. +.+.+=-+.....+-.++.|++        -|.++.|++....+++
T Consensus       145 ------------~~~v~c~~W~p~S~~vl~c~g-~h~~IKpL~~n~k~i~WkAHDG--------iiL~~~W~~~s~lI~s  203 (737)
T KOG1524|consen  145 ------------EESIRCARWAPNSNSIVFCQG-GHISIKPLAANSKIIRWRAHDG--------LVLSLSWSTQSNIIAS  203 (737)
T ss_pred             ------------CceeEEEEECCCCCceEEecC-CeEEEeecccccceeEEeccCc--------EEEEeecCccccceee
Confidence                        227999999999887776543 5566666665555556665555        8999999999998887


Q ss_pred             EcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCCEEEEEcCCCceecceeeeEEEccchhh
Q psy7108         221 ETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYSLDSGYVFDPFLLDISITPQSVK  300 (703)
Q Consensus       221 ~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dgv~iwd~~~~~~~~~~~~~~~~spd~~~  300 (703)
                      ++.+      ...++||. .|..+.....|+.+|++++|+|+ +.++.++.+-+++=..+.|..     ..++||+||  
T Consensus       204 gGED------~kfKvWD~-~G~~Lf~S~~~ey~ITSva~npd-~~~~v~S~nt~R~~~p~~GSi-----fnlsWS~DG--  268 (737)
T KOG1524|consen  204 GGED------FRFKIWDA-QGANLFTSAAEEYAITSVAFNPE-KDYLLWSYNTARFSSPRVGSI-----FNLSWSADG--  268 (737)
T ss_pred             cCCc------eeEEeecc-cCcccccCChhccceeeeeeccc-cceeeeeeeeeeecCCCccce-----EEEEEcCCC--
Confidence            6654      58999996 46667777789999999999999 677778776677544444443     468999999  


Q ss_pred             hHhhcCCcceEEEEEEecC
Q psy7108         301 EALADKDYAKALMMSLKLN  319 (703)
Q Consensus       301 ~~l~sg~~~~~l~la~~l~  319 (703)
                      ..++.|...+.+..+.-++
T Consensus       269 TQ~a~gt~~G~v~~A~~ie  287 (737)
T KOG1524|consen  269 TQATCGTSTGQLIVAYAIE  287 (737)
T ss_pred             ceeeccccCceEEEeeeeh
Confidence            6677777778888765554

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.48  E-value=1.3e-11  Score=133.39  Aligned_cols=238  Identities=21%  Similarity=0.400  Sum_probs=181.4

Q ss_pred             cccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc-eeEEEecCC-CcEEEEEE-ecCCC-EEEEEEC-CCeEE
Q psy7108          42 VLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD-TQHETIQLL-SDALCVAY-KPDGT-EIVVATL-DGQLI  116 (703)
Q Consensus        42 ~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~-~~~~~~~~~-~~V~~v~~-spdg~-~las~s~-dg~I~  116 (703)
                      .+.+|...+.++.+.+  .+..++.++.|+.+.+|+..... ....+.... ..+..+.+ ++++. .++..+. |+.+.
T Consensus        60 ~~~~~~~~i~~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  137 (466)
T COG2319          60 LLRGHEDSITSIAFSP--DGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVK  137 (466)
T ss_pred             eeeeccceEEEEEECC--CCcEEEEecCCCcEEEEEcCCCceeEEEEeccCCCceeeEEEECCCcceEEeccCCCCccEE
Confidence            4568999999999999  99999999999999999998775 444444433 36777777 88887 5555445 89999


Q ss_pred             EEEcCC-CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec-CCcEEEEECCCCceEEEEEec
Q psy7108         117 MFDVES-AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ-SKYICIYSSREGILLKKFTIT  194 (703)
Q Consensus       117 vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~-dg~I~lwD~~~~~~~~~~~~~  194 (703)
                      +||... ......+..|..                    .|..++|+|+++.+++++. |+.+++|++..+..+..+.. 
T Consensus       138 ~~~~~~~~~~~~~~~~~~~--------------------~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  196 (466)
T COG2319         138 LWDLSTPGKLIRTLEGHSE--------------------SVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAG-  196 (466)
T ss_pred             EEEecCCCeEEEEEecCcc--------------------cEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeecc-
Confidence            999998 677777777765                    7899999999998888885 99999999998777777664 


Q ss_pred             cCCccccccccceeeeeccCCCEEEEE-cccCCCCCeeEEECCCCCCCccce-eecCCccceEEEEEcCCCCEEEEEeCC
Q psy7108         195 QNKSLDGINDFINRRKMTEFGNVSLIE-TRETHEGGNVVLKLPGVKKGDMAA-RVLKPEVRVFCVKFSPTGQAWVAATTE  272 (703)
Q Consensus       195 ~~~~~~~~~~~v~~~~~spdg~~l~~~-~~~~~~~~~~~i~iwd~~~~~~~~-~~~~h~~~V~~l~~spdg~~l~s~s~D  272 (703)
                             +...+.+++++|++..++++ +.+      ..+++||...+.... .+..|.... ...|+|++..+++++.|
T Consensus       197 -------~~~~v~~~~~~~~~~~~~~~~~~d------~~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d  262 (466)
T COG2319         197 -------HTDPVSSLAFSPDGGLLIASGSSD------GTIRLWDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSD  262 (466)
T ss_pred             -------CCCceEEEEEcCCcceEEEEecCC------CcEEEEECCCCcEEeeecCCCCcce-eEeECCCCCEEEEecCC
Confidence                   34589999999999855554 332      368899888777776 577777765 34899999888999999


Q ss_pred             C-EEEEEcCCCce-e------cceeeeEEEccchhhhHhhcCCcceEEEEEEecC
Q psy7108         273 G-VHIYSLDSGYV-F------DPFLLDISITPQSVKEALADKDYAKALMMSLKLN  319 (703)
Q Consensus       273 g-v~iwd~~~~~~-~------~~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~  319 (703)
                      + +++|+...... .      ......+.+.|++  ..+.+++.++.+.+ |...
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~~d~~~~~-~~~~  314 (466)
T COG2319         263 GTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDG--KLLASGSSDGTVRL-WDLE  314 (466)
T ss_pred             CcEEEeeecCCCcEEEEEecCCccEEEEEECCCC--CEEEEeeCCCcEEE-EEcC
Confidence            9 99999886553 1      2233556888865  45555666655555 5444

>KOG0649|consensus

Probab=99.47  E-value=3.2e-12  Score=119.88  Aligned_cols=203  Identities=16%  Similarity=0.186  Sum_probs=148.4

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCce------eEEEe--cCC-----CcEEEEEEecCCCEEE
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDT------QHETI--QLL-----SDALCVAYKPDGTEIV  107 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~------~~~~~--~~~-----~~V~~v~~spdg~~la  107 (703)
                      -..++|.++|+.++|..    .+|++|+. |.|+-|......+      ..+..  .+.     -.|+++...|..+-++
T Consensus        56 v~eqahdgpiy~~~f~d----~~Lls~gd-G~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~  130 (325)
T KOG0649|consen   56 VPEQAHDGPIYYLAFHD----DFLLSGGD-GLVYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSIL  130 (325)
T ss_pred             eeccccCCCeeeeeeeh----hheeeccC-ceEEEeeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEE
Confidence            34489999999999975    67788765 9999887643322      11111  122     3588999999888888


Q ss_pred             EEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCce
Q psy7108         108 VATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGIL  187 (703)
Q Consensus       108 s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~  187 (703)
                      .++.|+.++-||+++|+..+++++|.+                    .|.++.--.....+++|+.||++++||.+++++
T Consensus       131 ~AgGD~~~y~~dlE~G~i~r~~rGHtD--------------------YvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~  190 (325)
T KOG0649|consen  131 FAGGDGVIYQVDLEDGRIQREYRGHTD--------------------YVHSVVGRNANGQILSGAEDGTVRVWDTKTQKH  190 (325)
T ss_pred             EecCCeEEEEEEecCCEEEEEEcCCcc--------------------eeeeeeecccCcceeecCCCccEEEEeccccce
Confidence            888999999999999999999999987                    899988745455789999999999999999999


Q ss_pred             EEEEEeccCCcccc--ccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCE
Q psy7108         188 LKKFTITQNKSLDG--INDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQA  265 (703)
Q Consensus       188 ~~~~~~~~~~~~~~--~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~  265 (703)
                      ++.+....+...-.  ...+|.+++.+  ..+++.+.+       ..+.+|.++..++...+. -..++..+.|..|  .
T Consensus       191 v~~ie~yk~~~~lRp~~g~wigala~~--edWlvCGgG-------p~lslwhLrsse~t~vfp-ipa~v~~v~F~~d--~  258 (325)
T KOG0649|consen  191 VSMIEPYKNPNLLRPDWGKWIGALAVN--EDWLVCGGG-------PKLSLWHLRSSESTCVFP-IPARVHLVDFVDD--C  258 (325)
T ss_pred             eEEeccccChhhcCcccCceeEEEecc--CceEEecCC-------CceeEEeccCCCceEEEe-cccceeEeeeecc--e
Confidence            99887655432221  23455555554  446665444       368999999888765544 3455777888544  6


Q ss_pred             EEEEeCCC-EEEEEcC
Q psy7108         266 WVAATTEG-VHIYSLD  280 (703)
Q Consensus       266 l~s~s~Dg-v~iwd~~  280 (703)
                      +++++... |.-|.+.
T Consensus       259 vl~~G~g~~v~~~~l~  274 (325)
T KOG0649|consen  259 VLIGGEGNHVQSYTLN  274 (325)
T ss_pred             EEEeccccceeeeeec
Confidence            67777655 8888774

>KOG0290|consensus

Probab=99.47  E-value=2.4e-12  Score=123.79  Aligned_cols=199  Identities=10%  Similarity=0.132  Sum_probs=148.4

Q ss_pred             CCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCce---eEEEecCCCcEEEEEEecCC-CEEEEEECCCeEEEEEc
Q psy7108          45 GHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDT---QHETIQLLSDALCVAYKPDG-TEIVVATLDGQLIMFDV  120 (703)
Q Consensus        45 gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~---~~~~~~~~~~V~~v~~spdg-~~las~s~dg~I~vwd~  120 (703)
                      .|..++++..|+.. +.+++.++|-|-+..|||++++..   ..+++.|..+|..++|...+ +.+|+++.||.|+++|+
T Consensus       148 ~~~aPlTSFDWne~-dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDL  226 (364)
T KOG0290|consen  148 EFCAPLTSFDWNEV-DPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDL  226 (364)
T ss_pred             ccCCcccccccccC-CcceeEeecccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEe
Confidence            45689999999986 889999999999999999998632   46677899999999999866 47899999999999999


Q ss_pred             CCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC-CCCEEEEEecC-CcEEEEECCCC-ceEEEEEeccCC
Q psy7108         121 ESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA-DGSCILAAGQS-KYICIYSSREG-ILLKKFTITQNK  197 (703)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp-dg~~l~s~s~d-g~I~lwD~~~~-~~~~~~~~~~~~  197 (703)
                      +..+--..+.....                 ...+...++|++ |-+++++-..| ..|.+.|++.. .++.++.     
T Consensus       227 R~leHSTIIYE~p~-----------------~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~-----  284 (364)
T KOG0290|consen  227 RSLEHSTIIYEDPS-----------------PSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLR-----  284 (364)
T ss_pred             cccccceEEecCCC-----------------CCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCcceehhh-----
Confidence            97765444433221                 123678899988 45777775444 56999999863 4455554     


Q ss_pred             ccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcc-----ceeecCCccceEEEEEcC-CCCEEEEEeC
Q psy7108         198 SLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDM-----AARVLKPEVRVFCVKFSP-TGQAWVAATT  271 (703)
Q Consensus       198 ~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~-----~~~~~~h~~~V~~l~~sp-dg~~l~s~s~  271 (703)
                         +|...|+.++|.|.....+.+++++     ..+-+||+.+.-.     ......-.+.|+.+.|+| .+.+++.+..
T Consensus       285 ---~H~a~VNgIaWaPhS~~hictaGDD-----~qaliWDl~q~~~~~~~dPilay~a~~EVNqi~Ws~~~~Dwiai~~~  356 (364)
T KOG0290|consen  285 ---NHQASVNGIAWAPHSSSHICTAGDD-----CQALIWDLQQMPRENGEDPILAYTAGGEVNQIQWSSSQPDWIAICFG  356 (364)
T ss_pred             ---cCcccccceEecCCCCceeeecCCc-----ceEEEEecccccccCCCCchhhhhccceeeeeeecccCCCEEEEEec
Confidence               4555999999999988777666654     5789999875321     111112456799999996 4678888876


Q ss_pred             CCE
Q psy7108         272 EGV  274 (703)
Q Consensus       272 Dgv  274 (703)
                      ..+
T Consensus       357 kkl  359 (364)
T KOG0290|consen  357 KKL  359 (364)
T ss_pred             Cee
Confidence            653

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.47  E-value=4.7e-12  Score=138.60  Aligned_cols=204  Identities=18%  Similarity=0.274  Sum_probs=137.0

Q ss_pred             eeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCC---CcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEE
Q psy7108          30 KGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWD---KTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEI  106 (703)
Q Consensus        30 ~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~D---g~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~l  106 (703)
                      .+|.+|...  +.+..+.+.+.+.+|+|  ||+.|+..+.+   ..|.+||+.+++. ..+....+.+.+.+|+|||+.|
T Consensus       180 ~~D~dG~~~--~~l~~~~~~v~~p~wSP--DG~~la~~s~~~~~~~I~~~dl~~g~~-~~l~~~~g~~~~~~~SPDG~~l  254 (427)
T PRK02889        180 ISDADGQNA--QSALSSPEPIISPAWSP--DGTKLAYVSFESKKPVVYVHDLATGRR-RVVANFKGSNSAPAWSPDGRTL  254 (427)
T ss_pred             EECCCCCCc--eEeccCCCCcccceEcC--CCCEEEEEEccCCCcEEEEEECCCCCE-EEeecCCCCccceEECCCCCEE
Confidence            556677766  77778889999999999  99999887643   3589999987753 3444455667789999999988


Q ss_pred             EE-EECCCeEEEE--EcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec-CCcEEEE--
Q psy7108         107 VV-ATLDGQLIMF--DVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ-SKYICIY--  180 (703)
Q Consensus       107 as-~s~dg~I~vw--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~-dg~I~lw--  180 (703)
                      +. .+.++...+|  |+.++. ...+..+..                    .....+|+|||+.|+..+. ++...+|  
T Consensus       255 a~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~--------------------~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~  313 (427)
T PRK02889        255 AVALSRDGNSQIYTVNADGSG-LRRLTQSSG--------------------IDTEPFFSPDGRSIYFTSDRGGAPQIYRM  313 (427)
T ss_pred             EEEEccCCCceEEEEECCCCC-cEECCCCCC--------------------CCcCeEEcCCCCEEEEEecCCCCcEEEEE
Confidence            74 5667765555  454444 233332221                    3456789999999887654 4555555  


Q ss_pred             ECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEc
Q psy7108         181 SSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFS  260 (703)
Q Consensus       181 D~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~s  260 (703)
                      |+.++...+ +....        ......+|||||+.+++.+..+   +...|.+||+.+++.......  .......|+
T Consensus       314 ~~~~g~~~~-lt~~g--------~~~~~~~~SpDG~~Ia~~s~~~---g~~~I~v~d~~~g~~~~lt~~--~~~~~p~~s  379 (427)
T PRK02889        314 PASGGAAQR-VTFTG--------SYNTSPRISPDGKLLAYISRVG---GAFKLYVQDLATGQVTALTDT--TRDESPSFA  379 (427)
T ss_pred             ECCCCceEE-EecCC--------CCcCceEECCCCCEEEEEEccC---CcEEEEEEECCCCCeEEccCC--CCccCceEC
Confidence            445544322 22111        1234578999999998776542   235799999988765433222  234678999


Q ss_pred             CCCCEEEEEeCCC
Q psy7108         261 PTGQAWVAATTEG  273 (703)
Q Consensus       261 pdg~~l~s~s~Dg  273 (703)
                      |||+.|+.++.++
T Consensus       380 pdg~~l~~~~~~~  392 (427)
T PRK02889        380 PNGRYILYATQQG  392 (427)
T ss_pred             CCCCEEEEEEecC
Confidence            9999997777555

>KOG1188|consensus

Probab=99.46  E-value=1.8e-12  Score=127.39  Aligned_cols=254  Identities=18%  Similarity=0.248  Sum_probs=163.9

Q ss_pred             ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEe--cCC-CcEEEEEEecCC
Q psy7108          28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETI--QLL-SDALCVAYKPDG  103 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~--~~~-~~V~~v~~spdg  103 (703)
                      ++++| .+|+.+  +.+++|...++.++|.....+..+.+|+.||+||+||++...+...+.  ++. .+-.|++-.-.+
T Consensus        52 v~lyd~~tg~~l--~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f~~ld~nck~  129 (376)
T KOG1188|consen   52 VRLYDKGTGQLL--EEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPFICLDLNCKK  129 (376)
T ss_pred             EEEEeccchhhh--heecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcceEeeccCcC
Confidence            44555 478888  999999999999999762135688999999999999998776543332  333 355667766677


Q ss_pred             CEEEEEEC----CCeEEEEEcCCCcE-EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC-CCCEEEEEecCCcE
Q psy7108         104 TEIVVATL----DGQLIMFDVESAAQ-VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA-DGSCILAAGQSKYI  177 (703)
Q Consensus       104 ~~las~s~----dg~I~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp-dg~~l~s~s~dg~I  177 (703)
                      +.+++|+.    +-.|.+||++..++ ++.+..                   .|.+-|++++|+| +.+.|++||.||-|
T Consensus       130 ~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~e-------------------SH~DDVT~lrFHP~~pnlLlSGSvDGLv  190 (376)
T KOG1188|consen  130 NIIACGTELTRSDASVVLWDVRSEQQLLRQLNE-------------------SHNDDVTQLRFHPSDPNLLLSGSVDGLV  190 (376)
T ss_pred             CeEEeccccccCceEEEEEEeccccchhhhhhh-------------------hccCcceeEEecCCCCCeEEeecccceE
Confidence            78888754    56799999998766 443322                   2344899999999 56889999999999


Q ss_pred             EEEECCCCceEEEEEeccCCccccccccceeeeeccCC--CEEEEEcccCCCCCeeEEECCCCCCCccceeecCCcc---
Q psy7108         178 CIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFG--NVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEV---  252 (703)
Q Consensus       178 ~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg--~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~---  252 (703)
                      .++|+.....-..+..     .-.+.+.|.++.|..++  +....+...       ...+|++..+.+...+.....   
T Consensus       191 nlfD~~~d~EeDaL~~-----viN~~sSI~~igw~~~~ykrI~clTH~E-------tf~~~ele~~~~~~~~~~~~~~~~  258 (376)
T KOG1188|consen  191 NLFDTKKDNEEDALLH-----VINHGSSIHLIGWLSKKYKRIMCLTHME-------TFAIYELEDGSEETWLENPDVSAD  258 (376)
T ss_pred             EeeecCCCcchhhHHH-----hhcccceeeeeeeecCCcceEEEEEccC-------ceeEEEccCCChhhcccCccchhh
Confidence            9999976422111100     11133578889999888  544443332       588999888765544433210   


Q ss_pred             ---------ceEEEEEcC-CCCEEEEEeC-CC-EEEEE---cCCCceecc----------eeeeEEEccchhhhHhhcCC
Q psy7108         253 ---------RVFCVKFSP-TGQAWVAATT-EG-VHIYS---LDSGYVFDP----------FLLDISITPQSVKEALADKD  307 (703)
Q Consensus       253 ---------~V~~l~~sp-dg~~l~s~s~-Dg-v~iwd---~~~~~~~~~----------~~~~~~~spd~~~~~l~sg~  307 (703)
                               .+... .+| ++..++.++. -+ ..++-   ..++.....          .+.++.|...+  .++-+|+
T Consensus       259 d~r~~~~~dY~I~~-~~~~~~~~~~l~g~~~n~~~~~~~~~~~s~~~~~~~a~l~g~~~eiVR~i~~~~~~--~~l~TGG  335 (376)
T KOG1188|consen  259 DLRKEDNCDYVINE-HSPGDKDTCALAGTDSNKGTIFPLVDTSSGSLLTEPAILQGGHEEIVRDILFDVKN--DVLYTGG  335 (376)
T ss_pred             hHHhhhhhhheeec-ccCCCcceEEEeccccCceeEEEeeecccccccCccccccCCcHHHHHHHhhhccc--ceeeccC
Confidence                     11111 223 4445555554 23 44433   233333222          12345555444  6788999


Q ss_pred             cceEEEEEEec
Q psy7108         308 YAKALMMSLKL  318 (703)
Q Consensus       308 ~~~~l~la~~l  318 (703)
                      .|+.+.+ |+.
T Consensus       336 EDG~l~~-Wk~  345 (376)
T KOG1188|consen  336 EDGLLQA-WKV  345 (376)
T ss_pred             CCceEEE-Eec
Confidence            9999887 885

>KOG1445|consensus

Probab=99.45  E-value=1.6e-12  Score=136.22  Aligned_cols=214  Identities=14%  Similarity=0.176  Sum_probs=155.4

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCcee-----EEEecCC-CcEEEEEEecCCCEEEEEECCCe
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQ-----HETIQLL-SDALCVAYKPDGTEIVVATLDGQ  114 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~-----~~~~~~~-~~V~~v~~spdg~~las~s~dg~  114 (703)
                      ..|.+|.+.|+.+.|+|. +..+|||||.|..|+||.+..+-..     ....++. -.|.|+.|+|...-|.+.+..|+
T Consensus        73 ~~l~~H~d~VtDl~FspF-~D~LLAT~S~D~~VKiW~lp~g~~q~LSape~~~g~~~~~vE~l~fHpTaDgil~s~a~g~  151 (1012)
T KOG1445|consen   73 GILAAHGDQVTDLGFSPF-ADELLATCSRDEPVKIWKLPRGHSQKLSAPEIDVGGGNVIVECLRFHPTADGILASGAHGS  151 (1012)
T ss_pred             ceeecccceeeccCcccc-chhhhhcccCCCeeEEEecCCCcccccCCcceeecCCceEEEEeecccCcCceEEeccCce
Confidence            578899999999999997 7789999999999999999744211     1122333 35789999998776777777899


Q ss_pred             EEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCC-CceEEEEEe
Q psy7108         115 LIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSRE-GILLKKFTI  193 (703)
Q Consensus       115 I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~-~~~~~~~~~  193 (703)
                      +++||+.+++.+..+.+|.+                    .|.+..|+.||+.|++++.|+.|+|||.+. ++.++..++
T Consensus       152 v~i~D~stqk~~~el~~h~d--------------------~vQSa~WseDG~llatscKdkqirifDPRa~~~piQ~te~  211 (1012)
T KOG1445|consen  152 VYITDISTQKTAVELSGHTD--------------------KVQSADWSEDGKLLATSCKDKQIRIFDPRASMEPIQTTEG  211 (1012)
T ss_pred             EEEEEcccCceeecccCCch--------------------hhhccccccCCceEeeecCCcceEEeCCccCCCccccccc
Confidence            99999999999988888776                    899999999999999999999999999986 566776666


Q ss_pred             ccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCc-cceeec-CCccceEEEEEcCCCCEEEEEeC
Q psy7108         194 TQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGD-MAARVL-KPEVRVFCVKFSPTGQAWVAATT  271 (703)
Q Consensus       194 ~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~-~~~~~~-~h~~~V~~l~~spdg~~l~s~s~  271 (703)
                      |.+.       .-..+.|..+-..+++.+-+  ....+.|++||.+... .+..+. .....|.---|.||.+.|+-++.
T Consensus       212 H~~~-------rdsRv~w~Gn~~rlisTGF~--~~R~reV~~~Dtr~f~~p~~tleld~stGvLiPl~DpDt~llfLaGK  282 (1012)
T KOG1445|consen  212 HGGM-------RDSRVLWAGNWERLISTGFT--TKRIREVRAYDTRKFGAPVHTLELDSSTGVLIPLYDPDTRLLFLAGK  282 (1012)
T ss_pred             cccc-------hhheeeeccchhhhhhcccc--hhhheeeeeeeccccCCcceeEEeecccceEeeeecCCCceEEEecC
Confidence            6552       22346666555555554432  1223679999988653 222221 12233444568999998866664


Q ss_pred             CC--EEEEEcCCCce
Q psy7108         272 EG--VHIYSLDSGYV  284 (703)
Q Consensus       272 Dg--v~iwd~~~~~~  284 (703)
                      ..  +..+.+...+.
T Consensus       283 G~~~l~~lE~~d~qP  297 (1012)
T KOG1445|consen  283 GTNKLFMLEMQDRQP  297 (1012)
T ss_pred             CcceEEEEEecCCCc
Confidence            43  66776655443

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.44  E-value=1.8e-12  Score=142.10  Aligned_cols=202  Identities=17%  Similarity=0.182  Sum_probs=133.9

Q ss_pred             CCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECC---CeEEEEEcCCCcEEEEEeccccCCCCCCCCccch
Q psy7108          70 DKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLD---GQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVT  146 (703)
Q Consensus        70 Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~d---g~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (703)
                      +..|.+||..... ...+..+...+.+.+|+|||+.|++++.+   ..|++||+.+++..... ....            
T Consensus       183 ~~~i~i~d~dg~~-~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~-~~~g------------  248 (429)
T PRK01742        183 PYEVRVADYDGFN-QFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVA-SFRG------------  248 (429)
T ss_pred             eEEEEEECCCCCC-ceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEe-cCCC------------
Confidence            4689999986553 45566778889999999999999988754   36999999887643221 1110            


Q ss_pred             hhcccCCccEEEEEEcCCCCEEEEEe-cCCcE--EEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcc
Q psy7108         147 REQSLKAKAVSTVCYSADGSCILAAG-QSKYI--CIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETR  223 (703)
Q Consensus       147 ~~~~~~~~~V~~i~~spdg~~l~s~s-~dg~I--~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~  223 (703)
                              ....++|+|||+.|+.++ .+|.+  ++||+.++.. ..+..+        ...+....|+|||+.+++.+.
T Consensus       249 --------~~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~~-~~lt~~--------~~~~~~~~wSpDG~~i~f~s~  311 (429)
T PRK01742        249 --------HNGAPAFSPDGSRLAFASSKDGVLNIYVMGANGGTP-SQLTSG--------AGNNTEPSWSPDGQSILFTSD  311 (429)
T ss_pred             --------ccCceeECCCCCEEEEEEecCCcEEEEEEECCCCCe-EeeccC--------CCCcCCEEECCCCCEEEEEEC
Confidence                    234689999999988764 57765  4557766654 333322        225678999999998877654


Q ss_pred             cCCCCCeeEEECCCC--CCCccceeecCCccceEEEEEcCCCCEEEEEeCCCEEEEEcCCCceec---c-eeeeEEEccc
Q psy7108         224 ETHEGGNVVLKLPGV--KKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYSLDSGYVFD---P-FLLDISITPQ  297 (703)
Q Consensus       224 ~~~~~~~~~i~iwd~--~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dgv~iwd~~~~~~~~---~-~~~~~~~spd  297 (703)
                      .+   +  ...+|++  ..+.. ..+ .+..  ...+|+|||+.++.++.+++.+||+.++....   . .....+|+|+
T Consensus       312 ~~---g--~~~I~~~~~~~~~~-~~l-~~~~--~~~~~SpDG~~ia~~~~~~i~~~Dl~~g~~~~lt~~~~~~~~~~sPd  382 (429)
T PRK01742        312 RS---G--SPQVYRMSASGGGA-SLV-GGRG--YSAQISADGKTLVMINGDNVVKQDLTSGSTEVLSSTFLDESPSISPN  382 (429)
T ss_pred             CC---C--CceEEEEECCCCCe-EEe-cCCC--CCccCCCCCCEEEEEcCCCEEEEECCCCCeEEecCCCCCCCceECCC
Confidence            22   1  3455544  33322 222 3333  45789999999988888887779998876421   1 1245789999


Q ss_pred             hhhhHhhcCCcceEEE
Q psy7108         298 SVKEALADKDYAKALM  313 (703)
Q Consensus       298 ~~~~~l~sg~~~~~l~  313 (703)
                      +  ..++.++.++...
T Consensus       383 G--~~i~~~s~~g~~~  396 (429)
T PRK01742        383 G--IMIIYSSTQGLGK  396 (429)
T ss_pred             C--CEEEEEEcCCCce
Confidence            9  5666555455444

>KOG0771|consensus

Probab=99.44  E-value=2e-12  Score=130.70  Aligned_cols=187  Identities=19%  Similarity=0.249  Sum_probs=132.0

Q ss_pred             EEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC
Q psy7108          95 LCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS  174 (703)
Q Consensus        95 ~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d  174 (703)
                      .+++|+.+|..+++++.||++++|+..+...+.....|+                    +.|.++.|+|||+.|++-+.|
T Consensus       148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~--------------------~eV~DL~FS~dgk~lasig~d  207 (398)
T KOG0771|consen  148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHH--------------------AEVKDLDFSPDGKFLASIGAD  207 (398)
T ss_pred             eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhc--------------------CccccceeCCCCcEEEEecCC
Confidence            689999999999999999999999976665554444443                    389999999999999999998


Q ss_pred             CcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCC---CEEEEEcccCCCCCeeEEECCCCCCCc-----ccee
Q psy7108         175 KYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFG---NVSLIETRETHEGGNVVLKLPGVKKGD-----MAAR  246 (703)
Q Consensus       175 g~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg---~~l~~~~~~~~~~~~~~i~iwd~~~~~-----~~~~  246 (703)
                       ..++|+++++.++......      .-......+.|+.|+   .+.+++.... .+   .++.||+..+.     ...+
T Consensus       208 -~~~VW~~~~g~~~a~~t~~------~k~~~~~~cRF~~d~~~~~l~laa~~~~-~~---~v~~~~~~~w~~~~~l~~~~  276 (398)
T KOG0771|consen  208 -SARVWSVNTGAALARKTPF------SKDEMFSSCRFSVDNAQETLRLAASQFP-GG---GVRLCDISLWSGSNFLRLRK  276 (398)
T ss_pred             -ceEEEEeccCchhhhcCCc------ccchhhhhceecccCCCceEEEEEecCC-CC---ceeEEEeeeeccccccchhh
Confidence             8999999999766654421      122356677888776   3333333221 11   24444333221     1112


Q ss_pred             ecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCcee-------cceeeeEEEccchhhhHhhcCCcceEEEE
Q psy7108         247 VLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVF-------DPFLLDISITPQSVKEALADKDYAKALMM  314 (703)
Q Consensus       247 ~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~-------~~~~~~~~~spd~~~~~l~sg~~~~~l~l  314 (703)
                      .......|.+++.|+||++++.|+.|| |-|++..+-+..       ..++..+.|+||.  +.+++-+.+....+
T Consensus       277 ~~~~~~siSsl~VS~dGkf~AlGT~dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pds--r~~~svSs~~~~~v  350 (398)
T KOG0771|consen  277 KIKRFKSISSLAVSDDGKFLALGTMDGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDS--RYLASVSSDNEAAV  350 (398)
T ss_pred             hhhccCcceeEEEcCCCcEEEEeccCCcEEEEEeceeeeeEeehhhheeeeeeEEEcCCc--CcccccccCCceeE
Confidence            222345799999999999999999999 999998876653       3356789999998  55555555444444

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.43  E-value=2.3e-11  Score=128.90  Aligned_cols=209  Identities=11%  Similarity=0.192  Sum_probs=134.5

Q ss_pred             cCeEEEEEcCCCCCCEEEEEeC-CCcEEEEEcCCCcee---EEEecCCCcEEEEEEecCCCEEEEEE-CCCeEEEEEcCC
Q psy7108          48 GPVSCIEFSPVLSSTGMVSASW-DKTVKLWNAVETDTQ---HETIQLLSDALCVAYKPDGTEIVVAT-LDGQLIMFDVES  122 (703)
Q Consensus        48 ~~V~~l~~sp~~dg~~L~sgs~-Dg~V~iWd~~~~~~~---~~~~~~~~~V~~v~~spdg~~las~s-~dg~I~vwd~~~  122 (703)
                      +....++|+|  ++++|++++. ++.|.+|++.+....   .....+.....+++++|+|+++++++ .++.|.+||+++
T Consensus        80 ~~p~~i~~~~--~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~  157 (330)
T PRK11028         80 GSPTHISTDH--QGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIEGLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSD  157 (330)
T ss_pred             CCceEEEECC--CCCEEEEEEcCCCeEEEEEECCCCCCCCceeeccCCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECC
Confidence            3467899999  9998888764 789999999643221   22223344578889999999886555 468999999986


Q ss_pred             CcEEEEEeccc-cCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec-CCcEEEEECCC--Cce--EEEEEeccC
Q psy7108         123 AAQVGSVEARR-DLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ-SKYICIYSSRE--GIL--LKKFTITQN  196 (703)
Q Consensus       123 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~-dg~I~lwD~~~--~~~--~~~~~~~~~  196 (703)
                      ...+....... ..               ..+.....++|+|||+++++++. +++|.+||+..  ++.  +..+.....
T Consensus       158 ~g~l~~~~~~~~~~---------------~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~  222 (330)
T PRK11028        158 DGHLVAQEPAEVTT---------------VEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPA  222 (330)
T ss_pred             CCcccccCCCceec---------------CCCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCC
Confidence            43221100000 00               00123567899999999988875 89999999973  332  233221111


Q ss_pred             CccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCC---ccceEEEEEcCCCCEEEEEeC-C
Q psy7108         197 KSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKP---EVRVFCVKFSPTGQAWVAATT-E  272 (703)
Q Consensus       197 ~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h---~~~V~~l~~spdg~~l~s~s~-D  272 (703)
                      . .. .......+.++|+|++++++...+     ..|.+|++........+.++   ......+.++|||++|++++. +
T Consensus       223 ~-~~-~~~~~~~i~~~pdg~~lyv~~~~~-----~~I~v~~i~~~~~~~~~~~~~~~~~~p~~~~~~~dg~~l~va~~~~  295 (330)
T PRK11028        223 D-FS-DTRWAADIHITPDGRHLYACDRTA-----SLISVFSVSEDGSVLSFEGHQPTETQPRGFNIDHSGKYLIAAGQKS  295 (330)
T ss_pred             c-CC-CCccceeEEECCCCCEEEEecCCC-----CeEEEEEEeCCCCeEEEeEEEeccccCCceEECCCCCEEEEEEccC
Confidence            0 00 112334688999999999875432     47999987543321122221   124567899999999987775 5


Q ss_pred             C-EEEEEcC
Q psy7108         273 G-VHIYSLD  280 (703)
Q Consensus       273 g-v~iwd~~  280 (703)
                      + |.+|+++
T Consensus       296 ~~v~v~~~~  304 (330)
T PRK11028        296 HHISVYEID  304 (330)
T ss_pred             CcEEEEEEc
Confidence            6 9999875

>KOG0322|consensus

Probab=99.42  E-value=6e-12  Score=119.56  Aligned_cols=265  Identities=15%  Similarity=0.153  Sum_probs=175.7

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEe-cCCCcEEEEEEecCCCEEEEEECCCeEEEEE
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETI-QLLSDALCVAYKPDGTEIVVATLDGQLIMFD  119 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~-~~~~~V~~v~~spdg~~las~s~dg~I~vwd  119 (703)
                      .+|++|.+.|+++.|..  + .+|.+|..-|.|++|++.+......+. .+...|+.+.--|+ ..+.+-+.|+.+.+|+
T Consensus         8 fvLRp~~~~v~s~~fqa--~-~rL~sg~~~G~V~~w~lqt~r~~~~~r~~g~~~it~lq~~p~-d~l~tqgRd~~L~lw~   83 (323)
T KOG0322|consen    8 FVLRPHSSSVTSVLFQA--N-ERLMSGLSVGIVKMWVLQTERDLPLIRLFGRLFITNLQSIPN-DSLDTQGRDPLLILWT   83 (323)
T ss_pred             eEeccccchheehhhcc--c-hhhhcccccceEEEEEeecCccchhhhhhccceeeceeecCC-cchhhcCCCceEEEEE
Confidence            57889999999999986  4 459999999999999998876554444 46677888888887 5678888999999999


Q ss_pred             cCCCcEEE--EEecc------ccCCCC------------C-------------CCCccchhhcccCCccEEEEEEcC-CC
Q psy7108         120 VESAAQVG--SVEAR------RDLDSG------------R-------------LDTDLVTREQSLKAKAVSTVCYSA-DG  165 (703)
Q Consensus       120 ~~~~~~~~--~~~~~------~~~~~~------------~-------------~~~~~~~~~~~~~~~~V~~i~~sp-dg  165 (703)
                      +.-+..+.  ++...      ..+..+            +             .+..........+.+.+.+..+.. ++
T Consensus        84 ia~s~~i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c~  163 (323)
T KOG0322|consen   84 IAYSAFISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQDKDHACG  163 (323)
T ss_pred             ccCcceEEEeeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceeeeecccccc
Confidence            97643321  11100      000000            0             000001111223456677776543 33


Q ss_pred             C--EEEEEecCCcEEEEECCCCceEEEEEecc--CCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC--
Q psy7108         166 S--CILAAGQSKYICIYSSREGILLKKFTITQ--NKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK--  239 (703)
Q Consensus       166 ~--~l~s~s~dg~I~lwD~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~--  239 (703)
                      +  ++++|-.+|.+.+||+.++..+-.+....  ......|..+|.++.+.+.-..=+.++.+      ..+..|++.  
T Consensus       164 s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~------dkl~~~Sl~~s  237 (323)
T KOG0322|consen  164 STFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGAD------DKLVMYSLNHS  237 (323)
T ss_pred             ceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCcc------ccceeeeeccc
Confidence            3  35567789999999999985544443221  12234566788888887544332333322      245566544  


Q ss_pred             CCccc--eeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecce------eeeEEEccchhhhHhhcCCcce
Q psy7108         240 KGDMA--ARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPF------LLDISITPQSVKEALADKDYAK  310 (703)
Q Consensus       240 ~~~~~--~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~------~~~~~~spd~~~~~l~sg~~~~  310 (703)
                      ++.+.  ....-.+-.|..+..-||++.+||++.|+ ++||+.++.+.+..+      ..+++|+|+.  .+++.++.|.
T Consensus       238 ~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~--~lmAaaskD~  315 (323)
T KOG0322|consen  238 TGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDC--ELMAAASKDA  315 (323)
T ss_pred             cCcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCC--chhhhccCCc
Confidence            23221  11122234588899999999999999999 999999998876554      3679999997  7899999999


Q ss_pred             EEEEEEec
Q psy7108         311 ALMMSLKL  318 (703)
Q Consensus       311 ~l~la~~l  318 (703)
                      .|.+ |++
T Consensus       316 rISL-WkL  322 (323)
T KOG0322|consen  316 RISL-WKL  322 (323)
T ss_pred             eEEe-eec
Confidence            9998 876

>KOG2394|consensus

Probab=99.42  E-value=3.4e-12  Score=132.06  Aligned_cols=138  Identities=20%  Similarity=0.339  Sum_probs=110.6

Q ss_pred             CcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc----------------------------eeEEEecCCCcEEEEE
Q psy7108          47 EGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD----------------------------TQHETIQLLSDALCVA   98 (703)
Q Consensus        47 ~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~----------------------------~~~~~~~~~~~V~~v~   98 (703)
                      +..|+|+.|-|. +...++.+-.+|.+.++|..-..                            .+....-..+.|...+
T Consensus       219 ktsvT~ikWvpg-~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~  297 (636)
T KOG2394|consen  219 KSSVTCIKWVPG-SDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFA  297 (636)
T ss_pred             ccceEEEEEEeC-CCceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCccceeEecccccccee
Confidence            478999999995 56677777888999999753110                            0011111234688999


Q ss_pred             EecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEE
Q psy7108          99 YKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYIC  178 (703)
Q Consensus        99 ~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~  178 (703)
                      |+|||++||+.+.||.++|+|..+.+.+..++....                    ...|++|||||++|++|+.|.-|.
T Consensus       298 FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFG--------------------GLLCvcWSPDGKyIvtGGEDDLVt  357 (636)
T KOG2394|consen  298 FSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFG--------------------GLLCVCWSPDGKYIVTGGEDDLVT  357 (636)
T ss_pred             EcCCCceEEEEecCceEEEeeccHHHHHHHHHhhcc--------------------ceEEEEEcCCccEEEecCCcceEE
Confidence            999999999999999999999998887766655433                    789999999999999999999999


Q ss_pred             EEECCCCceEEEEEeccCCccccccccceeeeecc
Q psy7108         179 IYSSREGILLKKFTITQNKSLDGINDFINRRKMTE  213 (703)
Q Consensus       179 lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp  213 (703)
                      ||.+..++.+..-+        +|+++|..++|.|
T Consensus       358 VwSf~erRVVARGq--------GHkSWVs~VaFDp  384 (636)
T KOG2394|consen  358 VWSFEERRVVARGQ--------GHKSWVSVVAFDP  384 (636)
T ss_pred             EEEeccceEEEecc--------ccccceeeEeecc
Confidence            99999988887754        4556999999997

>KOG1538|consensus

Probab=99.42  E-value=2.3e-12  Score=135.72  Aligned_cols=220  Identities=15%  Similarity=0.208  Sum_probs=163.9

Q ss_pred             CeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEE
Q psy7108          49 PVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGS  128 (703)
Q Consensus        49 ~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~  128 (703)
                      .|..++|.|  ||..|+.+..| .+.+||..++.....+.+|.+.|.|++|+.||+.+|+|+.|+.|.+|.-.-.   ..
T Consensus        14 ci~d~afkP--DGsqL~lAAg~-rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klE---G~   87 (1081)
T KOG1538|consen   14 CINDIAFKP--DGTQLILAAGS-RLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLE---GI   87 (1081)
T ss_pred             chheeEECC--CCceEEEecCC-EEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEeccccc---ce
Confidence            899999999  99988877654 7899999999888899999999999999999999999999999999975422   22


Q ss_pred             EeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCcccccccccee
Q psy7108         129 VEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINR  208 (703)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~  208 (703)
                      ++-                   .|++.|.|+.|+|-...|++++- ...-+|........+. +         ....+.+
T Consensus        88 LkY-------------------SH~D~IQCMsFNP~~h~LasCsL-sdFglWS~~qK~V~K~-k---------ss~R~~~  137 (1081)
T KOG1538|consen   88 LKY-------------------SHNDAIQCMSFNPITHQLASCSL-SDFGLWSPEQKSVSKH-K---------SSSRIIC  137 (1081)
T ss_pred             eee-------------------ccCCeeeEeecCchHHHhhhcch-hhccccChhhhhHHhh-h---------hheeEEE
Confidence            221                   23458999999999999999875 3467888765432211 1         1236788


Q ss_pred             eeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeec---CCccceEEEEEcCCC-----CEEEEEeCCC-EEEEEc
Q psy7108         209 RKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL---KPEVRVFCVKFSPTG-----QAWVAATTEG-VHIYSL  279 (703)
Q Consensus       209 ~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~---~h~~~V~~l~~spdg-----~~l~s~s~Dg-v~iwd~  279 (703)
                      ++|..||++++.+..+|      +|.+-+ ++++....+.   +.+.+|++++|+|..     ..+++..... +..+.+
T Consensus       138 CsWtnDGqylalG~~nG------TIsiRN-k~gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~L  210 (1081)
T KOG1538|consen  138 CSWTNDGQYLALGMFNG------TISIRN-KNGEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQL  210 (1081)
T ss_pred             eeecCCCcEEEEeccCc------eEEeec-CCCCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEe
Confidence            99999999999988775      676665 3455444444   467889999999963     4677777777 777777


Q ss_pred             CCCceecce------eeeEEEccchhhhHhhcCCcceEEEE
Q psy7108         280 DSGYVFDPF------LLDISITPQSVKEALADKDYAKALMM  314 (703)
Q Consensus       280 ~~~~~~~~~------~~~~~~spd~~~~~l~sg~~~~~l~l  314 (703)
                      . |+.+..-      ..+++.-++|  +++..|+.++.+.+
T Consensus       211 s-G~~Igk~r~L~FdP~CisYf~NG--Ey~LiGGsdk~L~~  248 (1081)
T KOG1538|consen  211 S-GKQIGKDRALNFDPCCISYFTNG--EYILLGGSDKQLSL  248 (1081)
T ss_pred             c-ceeecccccCCCCchhheeccCC--cEEEEccCCCceEE
Confidence            5 3333211      2456666777  77777777776655

>KOG0303|consensus

Probab=99.42  E-value=4.1e-12  Score=126.86  Aligned_cols=192  Identities=11%  Similarity=0.159  Sum_probs=137.9

Q ss_pred             cccCCceEEecCCceeeccCC---CccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCC
Q psy7108          15 THEGGNVVLKLPGVKKGDMAA---RVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLL   91 (703)
Q Consensus        15 ~~~~~~~~i~~~~v~~~d~tg---~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~   91 (703)
                      +..+.++.+.+|.+-..-.+.   +.+  ..|.||...|.-++|+|. -.+.|+|++.|.+|.+||+.+++....+ .|.
T Consensus        98 ASgSeD~~v~vW~IPe~~l~~~ltepv--v~L~gH~rrVg~V~wHPt-A~NVLlsag~Dn~v~iWnv~tgeali~l-~hp  173 (472)
T KOG0303|consen   98 ASGSEDTKVMVWQIPENGLTRDLTEPV--VELYGHQRRVGLVQWHPT-APNVLLSAGSDNTVSIWNVGTGEALITL-DHP  173 (472)
T ss_pred             ecCCCCceEEEEECCCcccccCcccce--EEEeecceeEEEEeeccc-chhhHhhccCCceEEEEeccCCceeeec-CCC
Confidence            445566677777654221111   334  678999999999999996 6789999999999999999999766654 499


Q ss_pred             CcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEE
Q psy7108          92 SDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAA  171 (703)
Q Consensus        92 ~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~  171 (703)
                      +-|.++.|+.||.+|++++.|+.|+|||.++++.+..-.+|...                   .-..+.|-.+|+.+.+|
T Consensus       174 d~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG~-------------------k~~Raifl~~g~i~tTG  234 (472)
T KOG0303|consen  174 DMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGA-------------------KPARAIFLASGKIFTTG  234 (472)
T ss_pred             CeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccCC-------------------CcceeEEeccCceeeec
Confidence            99999999999999999999999999999999998887777642                   33456678888844444


Q ss_pred             ---ecCCcEEEEECCCCc-eEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC
Q psy7108         172 ---GQSKYICIYSSREGI-LLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG  241 (703)
Q Consensus       172 ---s~dg~I~lwD~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~  241 (703)
                         ..+..+.+||...-. ++...+....       ..|.-.-+.+|.+.++..+.++     ..|+.|.+...
T Consensus       235 fsr~seRq~aLwdp~nl~eP~~~~elDtS-------nGvl~PFyD~dt~ivYl~GKGD-----~~IRYyEit~d  296 (472)
T KOG0303|consen  235 FSRMSERQIALWDPNNLEEPIALQELDTS-------NGVLLPFYDPDTSIVYLCGKGD-----SSIRYFEITNE  296 (472)
T ss_pred             cccccccceeccCcccccCcceeEEeccC-------CceEEeeecCCCCEEEEEecCC-----cceEEEEecCC
Confidence               246789999987632 2222111111       1344455677777776665432     46777766544

>KOG1240|consensus

Probab=99.42  E-value=1.2e-11  Score=139.02  Aligned_cols=264  Identities=16%  Similarity=0.118  Sum_probs=179.1

Q ss_pred             eeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc----e--eEEEec-CCCcEEEEEEecC
Q psy7108          30 KGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD----T--QHETIQ-LLSDALCVAYKPD  102 (703)
Q Consensus        30 ~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~----~--~~~~~~-~~~~V~~v~~spd  102 (703)
                      .|...|.++  ..|.-|...|..++.++. ++.+++|||.||+||+|+...-.    .  ...... ..+.+.++...+.
T Consensus      1033 gW~p~G~lV--AhL~Ehs~~v~k~a~s~~-~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~ 1109 (1431)
T KOG1240|consen 1033 GWNPRGILV--AHLHEHSSAVIKLAVSSE-HTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGN 1109 (1431)
T ss_pred             CCCccceEe--ehhhhccccccceeecCC-CCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccC
Confidence            388899999  999999999999999883 55999999999999999986321    1  111222 5678999999999


Q ss_pred             CCEEEEEECCCeEEEEEcCCCcE--EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC-CC-EEEEEecCCcEE
Q psy7108         103 GTEIVVATLDGQLIMFDVESAAQ--VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD-GS-CILAAGQSKYIC  178 (703)
Q Consensus       103 g~~las~s~dg~I~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd-g~-~l~s~s~dg~I~  178 (703)
                      +..+|+++.||.|.+.+++-...  ........             ......+..|..-+|... +. .++.+..-+.|.
T Consensus      1110 ~~~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri-------------~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv 1176 (1431)
T KOG1240|consen 1110 GDQFAVSTKDGSVRVLRIDHYNVSKRVATQVRI-------------PNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIV 1176 (1431)
T ss_pred             CCeEEEEcCCCeEEEEEccccccccceeeeeec-------------ccccCCCceEEeecccccccceeEEEEEeccceE
Confidence            99999999999999999875211  11111000             000111223444555443 33 577788888999


Q ss_pred             EEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeec-CCccceEEE
Q psy7108         179 IYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL-KPEVRVFCV  257 (703)
Q Consensus       179 lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~-~h~~~V~~l  257 (703)
                      .||+++.....+.+....      .+.|++++.+|.+.+++++++.|      .+.+||++=+.++.... .+..++..+
T Consensus      1177 ~~D~r~~~~~w~lk~~~~------hG~vTSi~idp~~~WlviGts~G------~l~lWDLRF~~~i~sw~~P~~~~i~~v 1244 (1431)
T KOG1240|consen 1177 SWDTRMRHDAWRLKNQLR------HGLVTSIVIDPWCNWLVIGTSRG------QLVLWDLRFRVPILSWEHPARAPIRHV 1244 (1431)
T ss_pred             EecchhhhhHHhhhcCcc------ccceeEEEecCCceEEEEecCCc------eEEEEEeecCceeecccCcccCCcceE
Confidence            999998665544432221      13899999999999999999875      79999999776665543 345677777


Q ss_pred             EEcCCC---CEEEEEeC--CC-EEEEEcCCCceecceeee-------------------------EEEccchhhhHhhcC
Q psy7108         258 KFSPTG---QAWVAATT--EG-VHIYSLDSGYVFDPFLLD-------------------------ISITPQSVKEALADK  306 (703)
Q Consensus       258 ~~spdg---~~l~s~s~--Dg-v~iwd~~~~~~~~~~~~~-------------------------~~~spd~~~~~l~sg  306 (703)
                      ..+|..   ...++++.  .+ |.+|++.+|.+...+..+                         ..+...  ...+.+|
T Consensus      1245 ~~~~~~~~~S~~vs~~~~~~nevs~wn~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~--~~~~ltg 1322 (1431)
T KOG1240|consen 1245 WLCPTYPQESVSVSAGSSSNNEVSTWNMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEK--NGFLLTG 1322 (1431)
T ss_pred             EeeccCCCCceEEEecccCCCceeeeecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccC--Cceeeec
Confidence            777654   35555554  44 999999998664433211                         011111  1355677


Q ss_pred             CcceEEEEEEecCchhHH
Q psy7108         307 DYAKALMMSLKLNEQGLI  324 (703)
Q Consensus       307 ~~~~~l~la~~l~~~~~~  324 (703)
                      +.|..++. |+...+...
T Consensus      1323 gsd~kIR~-wD~~~p~~s 1339 (1431)
T KOG1240|consen 1323 GSDMKIRK-WDPTRPEIS 1339 (1431)
T ss_pred             CCccceee-ccCCCcccc
Confidence            77888886 877666433

>KOG0649|consensus

Probab=99.41  E-value=2.6e-11  Score=113.90  Aligned_cols=212  Identities=9%  Similarity=0.087  Sum_probs=147.7

Q ss_pred             CeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCC----------ceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEE
Q psy7108          49 PVSCIEFSPVLSSTGMVSASWDKTVKLWNAVET----------DTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMF  118 (703)
Q Consensus        49 ~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~----------~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vw  118 (703)
                      .|.+-+|+|  .+++|+.|+.+|+|-+..+.+-          ..+.....|.++++.++|.  ..+|++|+ ||.|+-|
T Consensus        12 tvf~qa~sp--~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~--d~~Lls~g-dG~V~gw   86 (325)
T KOG0649|consen   12 TVFAQAISP--SKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFH--DDFLLSGG-DGLVYGW   86 (325)
T ss_pred             HHHHHhhCC--cceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeee--hhheeecc-CceEEEe
Confidence            456678999  9999999999999999987531          1233446799999999999  45677765 6999999


Q ss_pred             EcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCc
Q psy7108         119 DVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKS  198 (703)
Q Consensus       119 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~  198 (703)
                      .-+........+.--... .+.+.+      ...--.|+++-..|..+.++.++.|+.++.||+++|+..+++++|..  
T Consensus        87 ~W~E~~es~~~K~lwe~~-~P~~~~------~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtD--  157 (325)
T KOG0649|consen   87 EWNEEEESLATKRLWEVK-IPMQVD------AVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHTD--  157 (325)
T ss_pred             eehhhhhhccchhhhhhc-CccccC------cccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCcc--
Confidence            765432210000000000 000000      01112588999999888888888999999999999999999876554  


Q ss_pred             cccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCC----------ccceEEEEEcCCCCEEEE
Q psy7108         199 LDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKP----------EVRVFCVKFSPTGQAWVA  268 (703)
Q Consensus       199 ~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h----------~~~V~~l~~spdg~~l~s  268 (703)
                            ++.++.--.....+++++.+|      ++++||.++++.+..+...          ...|.+++-  +..++++
T Consensus       158 ------YvH~vv~R~~~~qilsG~EDG------tvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~--~edWlvC  223 (325)
T KOG0649|consen  158 ------YVHSVVGRNANGQILSGAEDG------TVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAV--NEDWLVC  223 (325)
T ss_pred             ------eeeeeeecccCcceeecCCCc------cEEEEeccccceeEEeccccChhhcCcccCceeEEEec--cCceEEe
Confidence                  888888755555566666554      9999999999887665431          123555554  5668988


Q ss_pred             EeCCCEEEEEcCCCceecce
Q psy7108         269 ATTEGVHIYSLDSGYVFDPF  288 (703)
Q Consensus       269 ~s~Dgv~iwd~~~~~~~~~~  288 (703)
                      |+.-.+.+|.+++.++...+
T Consensus       224 GgGp~lslwhLrsse~t~vf  243 (325)
T KOG0649|consen  224 GGGPKLSLWHLRSSESTCVF  243 (325)
T ss_pred             cCCCceeEEeccCCCceEEE
Confidence            88777999999988775554

>KOG4227|consensus

Probab=99.41  E-value=9.6e-12  Score=123.69  Aligned_cols=245  Identities=12%  Similarity=0.145  Sum_probs=174.4

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc-----eeEEEec--CCCcEEEEEEecCCCEEEEEECCC
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD-----TQHETIQ--LLSDALCVAYKPDGTEIVVATLDG  113 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~-----~~~~~~~--~~~~V~~v~~spdg~~las~s~dg  113 (703)
                      +-+.+|.+.|+++.|+.  ++++|++|+.|..+++|+++..-     +...+..  |.+.|.|++|...++.+++|+.++
T Consensus        50 KD~~~H~GCiNAlqFS~--N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~  127 (609)
T KOG4227|consen   50 KDVREHTGCINALQFSH--NDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWG  127 (609)
T ss_pred             hhhhhhccccceeeecc--CCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcc
Confidence            44578999999999999  89999999999999999985321     2233333  567899999999999999999999


Q ss_pred             eEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCc-eEEEEE
Q psy7108         114 QLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGI-LLKKFT  192 (703)
Q Consensus       114 ~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~-~~~~~~  192 (703)
                      +|..-|+++.+.+..+.....                  .+.|..+..+|..+.+++.+.++.|.+||.+... ....+.
T Consensus       128 ~VI~HDiEt~qsi~V~~~~~~------------------~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~  189 (609)
T KOG4227|consen  128 TVIKHDIETKQSIYVANENNN------------------RGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVL  189 (609)
T ss_pred             eeEeeecccceeeeeecccCc------------------ccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceee
Confidence            999999999988877765432                  3479999999999999999999999999998765 222221


Q ss_pred             eccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcc-ceeecC------CccceEEEEEcCCCCE
Q psy7108         193 ITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDM-AARVLK------PEVRVFCVKFSPTGQA  265 (703)
Q Consensus       193 ~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~-~~~~~~------h~~~V~~l~~spdg~~  265 (703)
                       ..+     ......++-|+|....+++..+..  +   -+-+||.+..+. +.+...      ....-.++.|+|+|+.
T Consensus       190 -~AN-----~~~~F~t~~F~P~~P~Li~~~~~~--~---G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q  258 (609)
T KOG4227|consen  190 -PAN-----SGKNFYTAEFHPETPALILVNSET--G---GPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQ  258 (609)
T ss_pred             -ecC-----CCccceeeeecCCCceeEEecccc--C---CCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCe
Confidence             111     123566788999887666555432  1   377999886532 222111      1122356789999999


Q ss_pred             EEEEeCCC-EEEEEcCCCceec-------------ceeeeEEEccchhhhHhhcCCcceEEEEEEecCc
Q psy7108         266 WVAATTEG-VHIYSLDSGYVFD-------------PFLLDISITPQSVKEALADKDYAKALMMSLKLNE  320 (703)
Q Consensus       266 l~s~s~Dg-v~iwd~~~~~~~~-------------~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~  320 (703)
                      |.+--... -..||+-+..+..             ....+++|..|-   .+++|+.+=.+.+ |++..
T Consensus       259 ~msiRR~~~P~~~D~~S~R~~V~k~D~N~~GY~N~~T~KS~~F~~D~---~v~tGSD~~~i~~-WklP~  323 (609)
T KOG4227|consen  259 FMSIRRGKCPLYFDFISQRCFVLKSDHNPNGYCNIKTIKSMTFIDDY---TVATGSDHWGIHI-WKLPR  323 (609)
T ss_pred             ehhhhccCCCEEeeeecccceeEeccCCCCcceeeeeeeeeeeecce---eeeccCcccceEE-EecCC
Confidence            87766555 4567765543311             111345665555   3788888888887 88753

>KOG0642|consensus

Probab=99.40  E-value=6.1e-12  Score=131.16  Aligned_cols=215  Identities=15%  Similarity=0.221  Sum_probs=154.3

Q ss_pred             cCCceEEecCCceeec----cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc----------
Q psy7108          17 EGGNVVLKLPGVKKGD----MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD----------   82 (703)
Q Consensus        17 ~~~~~~i~~~~v~~~d----~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~----------   82 (703)
                      ...+..+.+|+.+.-.    ..-+.+  .++.+|.++|.|++..+  ++..+++|+.||+|+.|++....          
T Consensus       312 ~sed~~lk~WnLqk~~~s~~~~~epi--~tfraH~gPVl~v~v~~--n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~v  387 (577)
T KOG0642|consen  312 ASEDGTLKLWNLQKAKKSAEKDVEPI--LTFRAHEGPVLCVVVPS--NGEHCYSGGIDGTIRCWNLPPNQDPDDSYDPSV  387 (577)
T ss_pred             eccccchhhhhhcccCCccccceeee--EEEecccCceEEEEecC--CceEEEeeccCceeeeeccCCCCCcccccCcch
Confidence            4455667778774321    122444  78899999999999999  99999999999999999765221          


Q ss_pred             eeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccC-----------------CCCC-CCC--
Q psy7108          83 TQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDL-----------------DSGR-LDT--  142 (703)
Q Consensus        83 ~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~-----------------~~~~-~~~--  142 (703)
                      ....+.+|.+.|..+++|+....|++++.||+++.|+...... .++......                 ...+ ...  
T Consensus       388 l~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~-~~f~~~~e~g~Plsvd~~ss~~a~~~~s~~~~~~~~  466 (577)
T KOG0642|consen  388 LSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP-CTFGEPKEHGYPLSVDRTSSRPAHSLASFRFGYTSI  466 (577)
T ss_pred             hccceeccccceeeeeecccccceeeecCCceEEeeccCCcCc-cccCCccccCCcceEeeccchhHhhhhhcccccccc
Confidence            1234567999999999999999999999999999999865544 222211100                 0000 000  


Q ss_pred             -------ccchhh-----cccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeee
Q psy7108         143 -------DLVTRE-----QSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRK  210 (703)
Q Consensus       143 -------~~~~~~-----~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  210 (703)
                             +.....     .......+.-+.++|.+...+++..|+.|+++|..++.++.....+.        ..+++++
T Consensus       467 ~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~~l~s~~a~~--------~svtsla  538 (577)
T KOG0642|consen  467 DDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKTGKILHSMVAHK--------DSVTSLA  538 (577)
T ss_pred             hhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceecccccccccchheeecc--------ceeccee
Confidence                   000000     11112357778889999999999999999999999999887766544        4899999


Q ss_pred             eccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCC
Q psy7108         211 MTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKP  250 (703)
Q Consensus       211 ~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h  250 (703)
                      +.|+|.+++.++.++      .+++|.+....++.....|
T Consensus       539 i~~ng~~l~s~s~d~------sv~l~kld~k~~~~es~~~  572 (577)
T KOG0642|consen  539 IDPNGPYLMSGSHDG------SVRLWKLDVKTCVLESTAH  572 (577)
T ss_pred             ecCCCceEEeecCCc------eeehhhccchheeeccccc
Confidence            999999999988774      8999988776666554444

>KOG1272|consensus

Probab=99.39  E-value=8.2e-13  Score=134.30  Aligned_cols=209  Identities=11%  Similarity=0.170  Sum_probs=174.2

Q ss_pred             eEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEE
Q psy7108          50 VSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSV  129 (703)
Q Consensus        50 V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~  129 (703)
                      -..+.++.  +|.+|+.|+.-|.|-.+|..++. +...+.....|.++.|-.+.+++|++ +.+-++|||- .|..++.+
T Consensus       132 PY~~~ytr--nGrhlllgGrKGHlAa~Dw~t~~-L~~Ei~v~Etv~Dv~~LHneq~~AVA-QK~y~yvYD~-~GtElHCl  206 (545)
T KOG1272|consen  132 PYHLDYTR--NGRHLLLGGRKGHLAAFDWVTKK-LHFEINVMETVRDVTFLHNEQFFAVA-QKKYVYVYDN-NGTELHCL  206 (545)
T ss_pred             CeeeeecC--CccEEEecCCccceeeeecccce-eeeeeehhhhhhhhhhhcchHHHHhh-hhceEEEecC-CCcEEeeh
Confidence            35788888  99999999999999999998884 45555677889999999988888887 5778999994 57778888


Q ss_pred             eccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceee
Q psy7108         130 EARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRR  209 (703)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~  209 (703)
                      ..+.                     .|..+.|-|..-+|++++..|.++--|+.+|+.+..+....+        .+..+
T Consensus       207 k~~~---------------------~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G--------~~~vm  257 (545)
T KOG1272|consen  207 KRHI---------------------RVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAG--------RTDVM  257 (545)
T ss_pred             hhcC---------------------chhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCC--------ccchh
Confidence            7765                     588999999998899999999999999999998877764444        56677


Q ss_pred             eeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecce
Q psy7108         210 KMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPF  288 (703)
Q Consensus       210 ~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~  288 (703)
                      +-+|-...+-++.+.|      +|.+|.....+++..+..|.++|.++++.++|++++|++.|. ++|||+..-.....+
T Consensus       258 ~qNP~NaVih~GhsnG------tVSlWSP~skePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~  331 (545)
T KOG1272|consen  258 KQNPYNAVIHLGHSNG------TVSLWSPNSKEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTY  331 (545)
T ss_pred             hcCCccceEEEcCCCc------eEEecCCCCcchHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeecccccccee
Confidence            7888888777777664      999999999999999999999999999999999999999999 999999876543333


Q ss_pred             e-----eeEEEccch
Q psy7108         289 L-----LDISITPQS  298 (703)
Q Consensus       289 ~-----~~~~~spd~  298 (703)
                      .     ..+++|..+
T Consensus       332 ~tp~~a~~ls~Sqkg  346 (545)
T KOG1272|consen  332 RTPHPASNLSLSQKG  346 (545)
T ss_pred             ecCCCcccccccccc
Confidence            2     346666666

>KOG2110|consensus

Probab=99.39  E-value=2.7e-10  Score=113.47  Aligned_cols=197  Identities=14%  Similarity=0.223  Sum_probs=151.2

Q ss_pred             CeEEEEEcCCCCCCEEEEEeCCC--cEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEE
Q psy7108          49 PVSCIEFSPVLSSTGMVSASWDK--TVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQV  126 (703)
Q Consensus        49 ~V~~l~~sp~~dg~~L~sgs~Dg--~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~  126 (703)
                      .|--+-|+.    .++|..+.+.  .+++.+.+.+.. .........|.+|.+..  +.|+++-.+ .|+|||+++.+.+
T Consensus        48 ~IvEmLFSS----SLvaiV~~~qpr~Lkv~~~Kk~~~-ICe~~fpt~IL~VrmNr--~RLvV~Lee-~IyIydI~~MklL  119 (391)
T KOG2110|consen   48 SIVEMLFSS----SLVAIVSIKQPRKLKVVHFKKKTT-ICEIFFPTSILAVRMNR--KRLVVCLEE-SIYIYDIKDMKLL  119 (391)
T ss_pred             EEEEeeccc----ceeEEEecCCCceEEEEEcccCce-EEEEecCCceEEEEEcc--ceEEEEEcc-cEEEEecccceee
Confidence            455555665    6666665543  488999876643 34445677899999874  567776555 4999999999999


Q ss_pred             EEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEE--ecCCcEEEEECCCCceEEEEEeccCCccccccc
Q psy7108         127 GSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAA--GQSKYICIYSSREGILLKKFTITQNKSLDGIND  204 (703)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~--s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~  204 (703)
                      .+++.-..                 +...+.++++++.+.+++.-  ...|.|.+||+.+-+.+..+..|.+        
T Consensus       120 hTI~t~~~-----------------n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH~~--------  174 (391)
T KOG2110|consen  120 HTIETTPP-----------------NPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQPVNTINAHKG--------  174 (391)
T ss_pred             hhhhccCC-----------------CccceEeeccCCCCceEEecCCCCCceEEEEEcccceeeeEEEecCC--------
Confidence            88865421                 22357777777777788863  3458899999999888888876555        


Q ss_pred             cceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCC--ccceEEEEEcCCCCEEEEEeCCC-EEEEEcCC
Q psy7108         205 FINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKP--EVRVFCVKFSPTGQAWVAATTEG-VHIYSLDS  281 (703)
Q Consensus       205 ~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h--~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~  281 (703)
                      .+.+++|+++|..+++++..|     ..||++.+.+|+.+..+...  -..|.+++|+||+++|++.++.+ |+||.++.
T Consensus       175 ~lAalafs~~G~llATASeKG-----TVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~  249 (391)
T KOG2110|consen  175 PLAALAFSPDGTLLATASEKG-----TVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETVHIFKLEK  249 (391)
T ss_pred             ceeEEEECCCCCEEEEeccCc-----eEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEecCCCeEEEEEecc
Confidence            899999999999999998776     57999999999988887754  35688999999999998888888 99999876


Q ss_pred             Cc
Q psy7108         282 GY  283 (703)
Q Consensus       282 ~~  283 (703)
                      ..
T Consensus       250 ~~  251 (391)
T KOG2110|consen  250 VS  251 (391)
T ss_pred             cc
Confidence            44

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.38  E-value=2.3e-11  Score=117.59  Aligned_cols=158  Identities=17%  Similarity=0.241  Sum_probs=110.8

Q ss_pred             EEEEEcCCCCCCEEEEEeC----------CCcEEEEEcCCCceeEEEe--cCCCcEEEEEEecCCCEEEEE--ECCCeEE
Q psy7108          51 SCIEFSPVLSSTGMVSASW----------DKTVKLWNAVETDTQHETI--QLLSDALCVAYKPDGTEIVVA--TLDGQLI  116 (703)
Q Consensus        51 ~~l~~sp~~dg~~L~sgs~----------Dg~V~iWd~~~~~~~~~~~--~~~~~V~~v~~spdg~~las~--s~dg~I~  116 (703)
                      ..+.|+|  +|+.|+.-..          -+...+|.++..+......  ...++|.+++|+|+|+.+|+.  ..++.|.
T Consensus         9 ~~~~W~~--~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~   86 (194)
T PF08662_consen    9 AKLHWQP--SGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVT   86 (194)
T ss_pred             EEEEecc--cCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccE
Confidence            4678999  8887764322          1345666664433333333  345579999999999987655  3567999


Q ss_pred             EEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC---CcEEEEECCCCceEEEEEe
Q psy7108         117 MFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS---KYICIYSSREGILLKKFTI  193 (703)
Q Consensus       117 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d---g~I~lwD~~~~~~~~~~~~  193 (703)
                      +||++ ++.+..+...                      .+..+.|+|+|++|++++.+   |.|.+||+++.+.+.++..
T Consensus        87 lyd~~-~~~i~~~~~~----------------------~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~~  143 (194)
T PF08662_consen   87 LYDVK-GKKIFSFGTQ----------------------PRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFEH  143 (194)
T ss_pred             EEcCc-ccEeEeecCC----------------------CceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeecccc
Confidence            99997 6666555432                      57889999999999998743   6799999998888766542


Q ss_pred             ccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccc
Q psy7108         194 TQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMA  244 (703)
Q Consensus       194 ~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~  244 (703)
                                ..++.++|+|||++++++........+..++||+.. |+.+
T Consensus       144 ----------~~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~-G~~l  183 (194)
T PF08662_consen  144 ----------SDATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQ-GRLL  183 (194)
T ss_pred             ----------CcEEEEEEcCCCCEEEEEEeccceeccccEEEEEec-CeEe
Confidence                      145789999999999988764322333568888864 4433

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.38  E-value=1.5e-10  Score=127.48  Aligned_cols=214  Identities=15%  Similarity=0.236  Sum_probs=143.5

Q ss_pred             ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCC---CcEEEEEcCCCceeEEEecCCCcEEEEEEecCCC
Q psy7108          28 VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWD---KTVKLWNAVETDTQHETIQLLSDALCVAYKPDGT  104 (703)
Q Consensus        28 v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~D---g~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~  104 (703)
                      +.+.|.+|...  +.+..+...+...+|+|  ||+.|+..+.+   ..|.+||+.+++. ..+....+.+...+|+|||+
T Consensus       181 l~~~d~~g~~~--~~l~~~~~~~~~p~wSp--DG~~la~~s~~~~~~~l~~~~l~~g~~-~~l~~~~g~~~~~~~SpDG~  255 (430)
T PRK00178        181 LQRSDYDGARA--VTLLQSREPILSPRWSP--DGKRIAYVSFEQKRPRIFVQNLDTGRR-EQITNFEGLNGAPAWSPDGS  255 (430)
T ss_pred             EEEECCCCCCc--eEEecCCCceeeeeECC--CCCEEEEEEcCCCCCEEEEEECCCCCE-EEccCCCCCcCCeEECCCCC
Confidence            33567677766  77777888999999999  99999877644   3588899987743 33444445566799999999


Q ss_pred             EEEEE-ECCC--eEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec-C--CcEE
Q psy7108         105 EIVVA-TLDG--QLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ-S--KYIC  178 (703)
Q Consensus       105 ~las~-s~dg--~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~-d--g~I~  178 (703)
                      .|+.. +.++  .|++||+++++... +..+..                    ......|+|||+.|+..+. +  ..|+
T Consensus       256 ~la~~~~~~g~~~Iy~~d~~~~~~~~-lt~~~~--------------------~~~~~~~spDg~~i~f~s~~~g~~~iy  314 (430)
T PRK00178        256 KLAFVLSKDGNPEIYVMDLASRQLSR-VTNHPA--------------------IDTEPFWGKDGRTLYFTSDRGGKPQIY  314 (430)
T ss_pred             EEEEEEccCCCceEEEEECCCCCeEE-cccCCC--------------------CcCCeEECCCCCEEEEEECCCCCceEE
Confidence            88754 4444  68889998876543 322221                    3456789999998876653 3  3588


Q ss_pred             EEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEE
Q psy7108         179 IYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVK  258 (703)
Q Consensus       179 lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~  258 (703)
                      ++|+.+++..+. ....        .......|+|||+.+++....+   +...|.++|+.+++.......  .......
T Consensus       315 ~~d~~~g~~~~l-t~~~--------~~~~~~~~Spdg~~i~~~~~~~---~~~~l~~~dl~tg~~~~lt~~--~~~~~p~  380 (430)
T PRK00178        315 KVNVNGGRAERV-TFVG--------NYNARPRLSADGKTLVMVHRQD---GNFHVAAQDLQRGSVRILTDT--SLDESPS  380 (430)
T ss_pred             EEECCCCCEEEe-ecCC--------CCccceEECCCCCEEEEEEccC---CceEEEEEECCCCCEEEccCC--CCCCCce
Confidence            888887764332 2111        1234578999999998876542   234688999988764332222  1223568


Q ss_pred             EcCCCCEEEEEeCCC----EEEEEcCC
Q psy7108         259 FSPTGQAWVAATTEG----VHIYSLDS  281 (703)
Q Consensus       259 ~spdg~~l~s~s~Dg----v~iwd~~~  281 (703)
                      |+|||+.++..+.++    +.+++++.
T Consensus       381 ~spdg~~i~~~~~~~g~~~l~~~~~~g  407 (430)
T PRK00178        381 VAPNGTMLIYATRQQGRGVLMLVSING  407 (430)
T ss_pred             ECCCCCEEEEEEecCCceEEEEEECCC
Confidence            999999987666543    55666643

>KOG2139|consensus

Probab=99.38  E-value=2.1e-11  Score=120.68  Aligned_cols=204  Identities=17%  Similarity=0.238  Sum_probs=137.5

Q ss_pred             CcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEe-cCCCcEEEEEEecCC-CEEEEEECCCeEEEEEcCCCc
Q psy7108          47 EGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETI-QLLSDALCVAYKPDG-TEIVVATLDGQLIMFDVESAA  124 (703)
Q Consensus        47 ~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~-~~~~~V~~v~~spdg-~~las~s~dg~I~vwd~~~~~  124 (703)
                      ...+..++|++  .-..+|++..|-.||+++-... +...+. .....|+|++|.|.+ +.|++|+. +-|.+|..+..-
T Consensus        98 ~~dlr~~aWhq--H~~~fava~nddvVriy~ksst-~pt~Lks~sQrnvtclawRPlsaselavgCr-~gIciW~~s~tl  173 (445)
T KOG2139|consen   98 EIDLRGVAWHQ--HIIAFAVATNDDVVRIYDKSST-CPTKLKSVSQRNVTCLAWRPLSASELAVGCR-AGICIWSDSRTL  173 (445)
T ss_pred             hcceeeEeech--hhhhhhhhccCcEEEEeccCCC-CCceecchhhcceeEEEeccCCcceeeeeec-ceeEEEEcCccc
Confidence            34678899999  6677888999999999997653 333333 356689999999976 45666654 569999875321


Q ss_pred             ----EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec-CCcEEEEECCCCceEEEEEeccCCcc
Q psy7108         125 ----QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ-SKYICIYSSREGILLKKFTITQNKSL  199 (703)
Q Consensus       125 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~-dg~I~lwD~~~~~~~~~~~~~~~~~~  199 (703)
                          .++....+.          .......+| .+|+++.|++||..+++++- |..|.|||+.++..+.......    
T Consensus       174 n~~r~~~~~s~~~----------~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~gl----  238 (445)
T KOG2139|consen  174 NANRNIRMMSTHH----------LQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGL----  238 (445)
T ss_pred             ccccccccccccc----------hhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCC----
Confidence                111111111          001111122 48999999999999999874 5679999999987654432111    


Q ss_pred             ccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC-CCccceeecCCccceEEEEEcCCCCEEEEEeCCCEEEEE
Q psy7108         200 DGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK-KGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYS  278 (703)
Q Consensus       200 ~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~-~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dgv~iwd  278 (703)
                          ..+.-+.|||||.++++++.+.      ..++|... +.....-.. ..+.|...+|+|+|++|..+....-++|+
T Consensus       239 ----gg~slLkwSPdgd~lfaAt~da------vfrlw~e~q~wt~erw~l-gsgrvqtacWspcGsfLLf~~sgsp~lys  307 (445)
T KOG2139|consen  239 ----GGFSLLKWSPDGDVLFAATCDA------VFRLWQENQSWTKERWIL-GSGRVQTACWSPCGSFLLFACSGSPRLYS  307 (445)
T ss_pred             ----CceeeEEEcCCCCEEEEecccc------eeeeehhcccceecceec-cCCceeeeeecCCCCEEEEEEcCCceEEE
Confidence                2567789999999999888764      78999543 333322222 34489999999999998665555445565


Q ss_pred             cC
Q psy7108         279 LD  280 (703)
Q Consensus       279 ~~  280 (703)
                      +.
T Consensus       308 l~  309 (445)
T KOG2139|consen  308 LT  309 (445)
T ss_pred             Ee
Confidence            43

>KOG1188|consensus

Probab=99.37  E-value=1.7e-11  Score=120.67  Aligned_cols=194  Identities=13%  Similarity=0.183  Sum_probs=144.8

Q ss_pred             CEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEec--CCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCC
Q psy7108          62 TGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKP--DGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGR  139 (703)
Q Consensus        62 ~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~sp--dg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~  139 (703)
                      +.+|++-..|+|++||..+++....+..++..+..++|..  ....+.+|+.||+|++||+++......+.-...     
T Consensus        41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~-----  115 (376)
T KOG1188|consen   41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQ-----  115 (376)
T ss_pred             eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCC-----
Confidence            4678888889999999999888888888999999999977  356789999999999999998766544433221     


Q ss_pred             CCCccchhhcccCCccEEEEEEcCCCCEEEEEe----cCCcEEEEECCCCce-EEEEEeccCCccccccccceeeeeccC
Q psy7108         140 LDTDLVTREQSLKAKAVSTVCYSADGSCILAAG----QSKYICIYSSREGIL-LKKFTITQNKSLDGINDFINRRKMTEF  214 (703)
Q Consensus       140 ~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s----~dg~I~lwD~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~spd  214 (703)
                                  .+.+..+++.+..++.+++|+    .+-.+.+||+|..+. ++.+       .+.|.+.|+++.|+|.
T Consensus       116 ------------~~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~-------~eSH~DDVT~lrFHP~  176 (376)
T KOG1188|consen  116 ------------SGTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQL-------NESHNDDVTQLRFHPS  176 (376)
T ss_pred             ------------CCCcceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhh-------hhhccCcceeEEecCC
Confidence                        023677888777788888774    456799999998755 4433       2457789999999998


Q ss_pred             CCEEEEEcccCCCCCeeEEECCCCCCCc---cceeecCCccceEEEEEcCCC--CEEEEEeCCCEEEEEcCCCce
Q psy7108         215 GNVSLIETRETHEGGNVVLKLPGVKKGD---MAARVLKPEVRVFCVKFSPTG--QAWVAATTEGVHIYSLDSGYV  284 (703)
Q Consensus       215 g~~l~~~~~~~~~~~~~~i~iwd~~~~~---~~~~~~~h~~~V~~l~~spdg--~~l~s~s~Dgv~iwd~~~~~~  284 (703)
                      ...++++++-+     +.+.++|++...   .+.....+...|.++.|..++  +.++....++..+|+++.+..
T Consensus       177 ~pnlLlSGSvD-----GLvnlfD~~~d~EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~  246 (376)
T KOG1188|consen  177 DPNLLLSGSVD-----GLVNLFDTKKDNEEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSE  246 (376)
T ss_pred             CCCeEEeeccc-----ceEEeeecCCCcchhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCCh
Confidence            87665555432     389999987652   233344677889999999988  544444444499999988764

>KOG1523|consensus

Probab=99.36  E-value=5.7e-11  Score=115.99  Aligned_cols=209  Identities=12%  Similarity=0.136  Sum_probs=154.0

Q ss_pred             ccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc---eeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEE
Q psy7108          43 LSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD---TQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFD  119 (703)
Q Consensus        43 l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~---~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd  119 (703)
                      +.--.++|+|.+|++  |++.+|.+-....|.|+.....+   ....+..|...|++++|+|..+.|++|+.|..-+||.
T Consensus         6 ~~~~~~pitchAwn~--drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~   83 (361)
T KOG1523|consen    6 FHRLLEPITCHAWNS--DRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWT   83 (361)
T ss_pred             eeeccCceeeeeecC--CCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccc
Confidence            333468999999999  99999999999999999986654   3345566999999999999999999999999999999


Q ss_pred             cC-CCcE--EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccC
Q psy7108         120 VE-SAAQ--VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQN  196 (703)
Q Consensus       120 ~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~  196 (703)
                      .. .++-  ...+..+                    .+..+++.|+|.++.+++|+....|.+|-.+....--.- -|  
T Consensus        84 ~~~~~~WkptlvLlRi--------------------NrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVs-Kh--  140 (361)
T KOG1523|consen   84 QPSGGTWKPTLVLLRI--------------------NRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVS-KH--  140 (361)
T ss_pred             cCCCCeeccceeEEEe--------------------ccceeeEeecCcCceEEeccCccEEEEEEEecccceehh-hh--
Confidence            84 3332  2223232                    337999999999999999999999988877643221000 00  


Q ss_pred             CccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECC-----CCCC-------------CccceeecCCccceEEEE
Q psy7108         197 KSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLP-----GVKK-------------GDMAARVLKPEVRVFCVK  258 (703)
Q Consensus       197 ~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iw-----d~~~-------------~~~~~~~~~h~~~V~~l~  258 (703)
                       ....+.+.|+++.|+|++-.+++++.++      ..+++     +++.             |+++.......+.+..+.
T Consensus       141 -ikkPirStv~sldWhpnnVLlaaGs~D~------k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~  213 (361)
T KOG1523|consen  141 -IKKPIRSTVTSLDWHPNNVLLAAGSTDG------KCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVL  213 (361)
T ss_pred             -hCCccccceeeeeccCCcceecccccCc------ceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeE
Confidence             1123445899999999999888887654      33333     2222             123333334567799999


Q ss_pred             EcCCCCEEEEEeCCC-EEEEEcCCCc
Q psy7108         259 FSPTGQAWVAATTEG-VHIYSLDSGY  283 (703)
Q Consensus       259 ~spdg~~l~s~s~Dg-v~iwd~~~~~  283 (703)
                      |+|+|..|+-.+.|+ +.+-|.....
T Consensus       214 fs~sG~~lawv~Hds~v~~~da~~p~  239 (361)
T KOG1523|consen  214 FSPSGNRLAWVGHDSTVSFVDAAGPS  239 (361)
T ss_pred             eCCCCCEeeEecCCCceEEeecCCCc
Confidence            999999999999999 8887765543

>KOG1517|consensus

Probab=99.36  E-value=7.4e-11  Score=130.80  Aligned_cols=264  Identities=12%  Similarity=0.153  Sum_probs=175.4

Q ss_pred             ecccCCceEEecCC---ceeec-cCCCccccccccCC---CcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCC--cee
Q psy7108          14 ETHEGGNVVLKLPG---VKKGD-MAARVLKPEVLSGH---EGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVET--DTQ   84 (703)
Q Consensus        14 ~~~~~~~~~i~~~~---v~~~d-~tg~~~~~~~l~gH---~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~--~~~   84 (703)
                      .-|.-..+++...+   +.+|| ..++++  ..+..+   ...|+.+.+-..-|..++++|+.||.||||+-...  +..
T Consensus      1071 ~~hpf~p~i~~ad~r~~i~vwd~e~~~~l--~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~~~~~ 1148 (1387)
T KOG1517|consen 1071 KFHPFEPQIAAADDRERIRVWDWEKGRLL--NGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIWKDYADKWKKP 1148 (1387)
T ss_pred             eecCCCceeEEcCCcceEEEEecccCcee--ccccCCCCCCCccceeeeecccchhheeeeccCceEEEecccccccCCc
Confidence            33444445444442   55566 456666  555543   45788888865325678999999999999974322  111


Q ss_pred             ---EEEec-------CCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCc
Q psy7108          85 ---HETIQ-------LLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAK  154 (703)
Q Consensus        85 ---~~~~~-------~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (703)
                         .....       ..+.-.-+.|.....+|++++.-..|+|||.........+....+                   .
T Consensus      1149 eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~-------------------t 1209 (1387)
T KOG1517|consen 1149 ELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIPYGSS-------------------T 1209 (1387)
T ss_pred             eeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccceeEeecccCCC-------------------c
Confidence               11111       111124477888777787777788999999998877776655432                   2


Q ss_pred             cEEEEEEcC-CCCEEEEEecCCcEEEEECCCCce---EEEEEeccCCccccccccceeeeeccCCCE-EEEEcccCCCCC
Q psy7108         155 AVSTVCYSA-DGSCILAAGQSKYICIYSSREGIL---LKKFTITQNKSLDGINDFINRRKMTEFGNV-SLIETRETHEGG  229 (703)
Q Consensus       155 ~V~~i~~sp-dg~~l~s~s~dg~I~lwD~~~~~~---~~~~~~~~~~~~~~~~~~v~~~~~spdg~~-l~~~~~~~~~~~  229 (703)
                      .|+++.-+- .|+.+++|..||.|++||.+....   +...+.|..      ...|..+.+-+.|-. ++.++.+|    
T Consensus      1210 ~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~------~~~Iv~~slq~~G~~elvSgs~~G---- 1279 (1387)
T KOG1517|consen 1210 LVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHND------VEPIVHLSLQRQGLGELVSGSQDG---- 1279 (1387)
T ss_pred             cceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCC------cccceeEEeecCCCcceeeeccCC----
Confidence            566665433 479999999999999999986432   333333322      112788888887765 66666654    


Q ss_pred             eeEEECCCCCCCccc--eeecCCc--c-ceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecce-------------ee
Q psy7108         230 NVVLKLPGVKKGDMA--ARVLKPE--V-RVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPF-------------LL  290 (703)
Q Consensus       230 ~~~i~iwd~~~~~~~--~~~~~h~--~-~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~-------------~~  290 (703)
                        .|++||++.....  .....|-  + .++++..++....+|+|+. + |+||++...+. ..+             ..
T Consensus      1280 --~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~G~~l-~~~k~n~~F~~q~~gs~s 1355 (1387)
T KOG1517|consen 1280 --DIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLSGEQL-NIIKYNPGFMGQRIGSVS 1355 (1387)
T ss_pred             --eEEEEecccCcccccceeeeccccCccceeeeeccCCCeeeecCc-ceEEEEecChhhh-cccccCcccccCcCCCcc
Confidence              7999999974221  1222232  3 4999999999999999998 6 99999864332 211             25


Q ss_pred             eEEEccchhhhHhhcCCcceEEEE
Q psy7108         291 DISITPQSVKEALADKDYAKALMM  314 (703)
Q Consensus       291 ~~~~spd~~~~~l~sg~~~~~l~l  314 (703)
                      +++|+|-.  .+++.|..|..+.+
T Consensus      1356 cL~FHP~~--~llAaG~~Ds~V~i 1377 (1387)
T KOG1517|consen 1356 CLAFHPHR--LLLAAGSADSTVSI 1377 (1387)
T ss_pred             eeeecchh--HhhhhccCCceEEE
Confidence            68999987  88999988888876

>KOG0644|consensus

Probab=99.34  E-value=2.5e-12  Score=138.94  Aligned_cols=235  Identities=16%  Similarity=0.213  Sum_probs=160.4

Q ss_pred             ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEE
Q psy7108          28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEI  106 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~l  106 (703)
                      +++|. .++.++  ..+.||.+.|+.++.+.  +..+++++|.|..|++|-+.++..+..+.+|++.|++++|+|-.   
T Consensus       214 vKiwS~et~~~l--As~rGhs~ditdlavs~--~n~~iaaaS~D~vIrvWrl~~~~pvsvLrghtgavtaiafsP~~---  286 (1113)
T KOG0644|consen  214 VKIWSMETARCL--ASCRGHSGDITDLAVSS--NNTMIAAASNDKVIRVWRLPDGAPVSVLRGHTGAVTAIAFSPRA---  286 (1113)
T ss_pred             eeeeeccchhhh--ccCCCCccccchhccch--hhhhhhhcccCceEEEEecCCCchHHHHhccccceeeeccCccc---
Confidence            55665 588899  99999999999999998  88899999999999999999998888888999999999999954   


Q ss_pred             EEEECCCeEEEEEcCCCcEEEEEeccccCCCCCC---------CCccch--hhcccCCccEEEEEEcCCCC---------
Q psy7108         107 VVATLDGQLIMFDVESAAQVGSVEARRDLDSGRL---------DTDLVT--REQSLKAKAVSTVCYSADGS---------  166 (703)
Q Consensus       107 as~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~---------~~~~~~--~~~~~~~~~V~~i~~spdg~---------  166 (703)
                       +.+.||++++||.+ ...+..............         .....+  .........+.+++|...+-         
T Consensus       287 -sss~dgt~~~wd~r-~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~Tgs~d~ea~n~e~~~l~~~~~~lif~t~ssd~  364 (1113)
T KOG0644|consen  287 -SSSDDGTCRIWDAR-LEPRIYVPRPLKFTEKDLVDSILFENNGDRFLTGSRDGEARNHEFEQLAWRSNLLIFVTRSSDL  364 (1113)
T ss_pred             -cCCCCCceEecccc-ccccccCCCCCCcccccceeeeeccccccccccccCCcccccchhhHhhhhccceEEEeccccc
Confidence             77889999999987 111110000000000000         000000  00000111222333333222         


Q ss_pred             --EEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccc
Q psy7108         167 --CILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMA  244 (703)
Q Consensus       167 --~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~  244 (703)
                        +.+++-.+-.+++|++.+|.......+        |.+.+..+.++|....++.+.+.  +   +...|||+-.|.++
T Consensus       365 ~~~~~~ar~~~~~~vwnl~~g~l~H~l~g--------hsd~~yvLd~Hpfn~ri~msag~--d---gst~iwdi~eg~pi  431 (1113)
T KOG0644|consen  365 SSIVVTARNDHRLCVWNLYTGQLLHNLMG--------HSDEVYVLDVHPFNPRIAMSAGY--D---GSTIIWDIWEGIPI  431 (1113)
T ss_pred             cccceeeeeeeEeeeeecccchhhhhhcc--------cccceeeeeecCCCcHhhhhccC--C---CceEeeecccCCcc
Confidence              233344456688888888876655543        44578889999998877665543  2   37889999999887


Q ss_pred             eeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCce
Q psy7108         245 ARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYV  284 (703)
Q Consensus       245 ~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~  284 (703)
                      +........+..-+||+||..++....-| +.|.....+..
T Consensus       432 k~y~~gh~kl~d~kFSqdgts~~lsd~hgql~i~g~gqs~s  472 (1113)
T KOG0644|consen  432 KHYFIGHGKLVDGKFSQDGTSIALSDDHGQLYILGTGQSKS  472 (1113)
T ss_pred             eeeecccceeeccccCCCCceEecCCCCCceEEeccCCCcc
Confidence            77665566777889999999998888778 88887655443

>KOG2139|consensus

Probab=99.34  E-value=1.4e-10  Score=115.01  Aligned_cols=209  Identities=14%  Similarity=0.245  Sum_probs=137.2

Q ss_pred             ceeeccCCCccccccccC-CCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCce-----------eEEEecC--CCc
Q psy7108          28 VKKGDMAARVLKPEVLSG-HEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDT-----------QHETIQL--LSD   93 (703)
Q Consensus        28 v~~~d~tg~~~~~~~l~g-H~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~-----------~~~~~~~--~~~   93 (703)
                      |+++++..++.  ..|+. -...|+|++|-|. .++.|+.|+.. -|.+|.......           ..++..+  ...
T Consensus       122 Vriy~ksst~p--t~Lks~sQrnvtclawRPl-saselavgCr~-gIciW~~s~tln~~r~~~~~s~~~~qvl~~pgh~p  197 (445)
T KOG2139|consen  122 VRIYDKSSTCP--TKLKSVSQRNVTCLAWRPL-SASELAVGCRA-GICIWSDSRTLNANRNIRMMSTHHLQVLQDPGHNP  197 (445)
T ss_pred             EEEeccCCCCC--ceecchhhcceeEEEeccC-Ccceeeeeecc-eeEEEEcCcccccccccccccccchhheeCCCCce
Confidence            44555555554  55543 3567999999995 66778888774 588998653211           1122222  257


Q ss_pred             EEEEEEecCCCEEEEEEC-CCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe
Q psy7108          94 ALCVAYKPDGTEIVVATL-DGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG  172 (703)
Q Consensus        94 V~~v~~spdg~~las~s~-dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s  172 (703)
                      |+++.|.+||..+++++. |..|.|||.+++..+......                    .+.++-+.|||||.+|++++
T Consensus       198 Vtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~g--------------------lgg~slLkwSPdgd~lfaAt  257 (445)
T KOG2139|consen  198 VTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKG--------------------LGGFSLLKWSPDGDVLFAAT  257 (445)
T ss_pred             eeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccC--------------------CCceeeEEEcCCCCEEEEec
Confidence            999999999999999876 568999999999876554221                    23788999999999999999


Q ss_pred             cCCcEEEEECCC-CceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcc--------
Q psy7108         173 QSKYICIYSSRE-GILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDM--------  243 (703)
Q Consensus       173 ~dg~I~lwD~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~--------  243 (703)
                      -|+..++|+... ....+- ....        ..|...+|+|+|+.+++++.....  -.++.. +-+....        
T Consensus       258 ~davfrlw~e~q~wt~erw-~lgs--------grvqtacWspcGsfLLf~~sgsp~--lysl~f-~~~~~~~~~~~~~k~  325 (445)
T KOG2139|consen  258 CDAVFRLWQENQSWTKERW-ILGS--------GRVQTACWSPCGSFLLFACSGSPR--LYSLTF-DGEDSVFLRPQSIKR  325 (445)
T ss_pred             ccceeeeehhcccceecce-eccC--------CceeeeeecCCCCEEEEEEcCCce--EEEEee-cCCCccccCccccee
Confidence            999999996543 322222 1111        278889999999999887765310  011111 1111000        


Q ss_pred             ---ce-----eecC----CccceEEEEEcCCCCEEEEEeCC
Q psy7108         244 ---AA-----RVLK----PEVRVFCVKFSPTGQAWVAATTE  272 (703)
Q Consensus       244 ---~~-----~~~~----h~~~V~~l~~spdg~~l~s~s~D  272 (703)
                         +.     ....    -.+.+.+++|.|.|.+||+.-..
T Consensus       326 ~lliaDL~e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg  366 (445)
T KOG2139|consen  326 VLLIADLQEVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKG  366 (445)
T ss_pred             eeeeccchhhhhhcCcccccCccceeeECCCCCEEEEEEcC
Confidence               00     0001    13568899999999999886543

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.33  E-value=8.5e-11  Score=113.68  Aligned_cols=114  Identities=18%  Similarity=0.257  Sum_probs=86.8

Q ss_pred             cEEEEEEcCCCCEEEEE--ecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeE
Q psy7108         155 AVSTVCYSADGSCILAA--GQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVV  232 (703)
Q Consensus       155 ~V~~i~~spdg~~l~s~--s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~  232 (703)
                      +|.+++|+|+|+.+++.  ..++.|.+||++ ++.+..+.  .        ..++.+.|+|+|+++++++.++..   ..
T Consensus        61 ~I~~~~WsP~g~~favi~g~~~~~v~lyd~~-~~~i~~~~--~--------~~~n~i~wsP~G~~l~~~g~~n~~---G~  126 (194)
T PF08662_consen   61 PIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK-GKKIFSFG--T--------QPRNTISWSPDGRFLVLAGFGNLN---GD  126 (194)
T ss_pred             ceEEEEECcCCCEEEEEEccCCcccEEEcCc-ccEeEeec--C--------CCceEEEECCCCCEEEEEEccCCC---cE
Confidence            69999999999987664  356789999997 55555543  1        256789999999999998754322   36


Q ss_pred             EECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeC------CC-EEEEEcCCCcee
Q psy7108         233 LKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATT------EG-VHIYSLDSGYVF  285 (703)
Q Consensus       233 i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~------Dg-v~iwd~~~~~~~  285 (703)
                      +.+||.++.+.+.....  ..+..++|||||+++++++.      |. ++||+.. |+.+
T Consensus       127 l~~wd~~~~~~i~~~~~--~~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~-G~~l  183 (194)
T PF08662_consen  127 LEFWDVRKKKKISTFEH--SDATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQ-GRLL  183 (194)
T ss_pred             EEEEECCCCEEeecccc--CcEEEEEEcCCCCEEEEEEeccceeccccEEEEEec-CeEe
Confidence            99999998777655433  34789999999999988764      44 9999986 4443

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.33  E-value=2.3e-10  Score=125.55  Aligned_cols=211  Identities=16%  Similarity=0.256  Sum_probs=142.7

Q ss_pred             eeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCC---CcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEE
Q psy7108          30 KGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWD---KTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEI  106 (703)
Q Consensus        30 ~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~D---g~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~l  106 (703)
                      .+|.+|...  +.+..+...+.+.+|+|  ||++|+.++.+   ..|.+||+.++.. ..+..+.+.+.+++|+|||+.|
T Consensus       174 ~~d~~g~~~--~~l~~~~~~~~~p~~Sp--dg~~la~~~~~~~~~~i~v~d~~~g~~-~~~~~~~~~~~~~~~spDg~~l  248 (417)
T TIGR02800       174 VADYDGANP--QTITRSREPILSPAWSP--DGQKLAYVSFESGKPEIYVQDLATGQR-EKVASFPGMNGAPAFSPDGSKL  248 (417)
T ss_pred             EEcCCCCCC--EEeecCCCceecccCCC--CCCEEEEEEcCCCCcEEEEEECCCCCE-EEeecCCCCccceEECCCCCEE
Confidence            445556655  77777888899999999  99999987654   4799999987743 3444566667789999999987


Q ss_pred             EEE-ECCC--eEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC-C--cEEEE
Q psy7108         107 VVA-TLDG--QLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS-K--YICIY  180 (703)
Q Consensus       107 as~-s~dg--~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d-g--~I~lw  180 (703)
                      +.. +.++  .|++||+.+++.... ..+..                    .....+|+|||+.|+.++.. +  .|+++
T Consensus       249 ~~~~~~~~~~~i~~~d~~~~~~~~l-~~~~~--------------------~~~~~~~s~dg~~l~~~s~~~g~~~iy~~  307 (417)
T TIGR02800       249 AVSLSKDGNPDIYVMDLDGKQLTRL-TNGPG--------------------IDTEPSWSPDGKSIAFTSDRGGSPQIYMM  307 (417)
T ss_pred             EEEECCCCCccEEEEECCCCCEEEC-CCCCC--------------------CCCCEEECCCCCEEEEEECCCCCceEEEE
Confidence            654 3343  589999987764332 22211                    23456899999998876543 3  58888


Q ss_pred             ECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEc
Q psy7108         181 SSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFS  260 (703)
Q Consensus       181 D~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~s  260 (703)
                      |+.+++.. .+....        .......|+|+|+.++++...+   +...|.+||+.++... .+... .......|+
T Consensus       308 d~~~~~~~-~l~~~~--------~~~~~~~~spdg~~i~~~~~~~---~~~~i~~~d~~~~~~~-~l~~~-~~~~~p~~s  373 (417)
T TIGR02800       308 DADGGEVR-RLTFRG--------GYNASPSWSPDGDLIAFVHREG---GGFNIAVMDLDGGGER-VLTDT-GLDESPSFA  373 (417)
T ss_pred             ECCCCCEE-EeecCC--------CCccCeEECCCCCEEEEEEccC---CceEEEEEeCCCCCeE-EccCC-CCCCCceEC
Confidence            88876543 222111        2456789999999988877643   3357889998876432 22222 234456899


Q ss_pred             CCCCEEEEEeCCC----EEEEEcC
Q psy7108         261 PTGQAWVAATTEG----VHIYSLD  280 (703)
Q Consensus       261 pdg~~l~s~s~Dg----v~iwd~~  280 (703)
                      |||+.|+.++.++    +.+.+..
T Consensus       374 pdg~~l~~~~~~~~~~~l~~~~~~  397 (417)
T TIGR02800       374 PNGRMILYATTRGGRGVLGLVSTD  397 (417)
T ss_pred             CCCCEEEEEEeCCCcEEEEEEECC
Confidence            9999987776654    4455543

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>PRK01029 tolB translocation protein TolB; Provisional

Probab=99.33  E-value=2.3e-10  Score=124.77  Aligned_cols=218  Identities=11%  Similarity=0.049  Sum_probs=138.0

Q ss_pred             eeccCCCccccccccCCCcCeEEEEEcCCCCCCE--E-EEEeCCC--cEEEEEcCCCceeEEEecCCCcEEEEEEecCCC
Q psy7108          30 KGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTG--M-VSASWDK--TVKLWNAVETDTQHETIQLLSDALCVAYKPDGT  104 (703)
Q Consensus        30 ~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~--L-~sgs~Dg--~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~  104 (703)
                      +.|.+|...  +.++.....+.+-+|+|  ||+.  + ++...+|  .|.+.++.+++ ...+....+.....+|||||+
T Consensus       169 ~~d~dG~~~--~~lt~~~~~~~sP~wSP--DG~~~~~~y~S~~~g~~~I~~~~l~~g~-~~~lt~~~g~~~~p~wSPDG~  243 (428)
T PRK01029        169 SVDYDGQNL--RPLTQEHSLSITPTWMH--IGSGFPYLYVSYKLGVPKIFLGSLENPA-GKKILALQGNQLMPTFSPRKK  243 (428)
T ss_pred             EEcCCCCCc--eEcccCCCCcccceEcc--CCCceEEEEEEccCCCceEEEEECCCCC-ceEeecCCCCccceEECCCCC
Confidence            446667655  67777777888999999  9875  2 2444444  46666776663 445555666677899999999


Q ss_pred             EEEEEEC-CC--e--EEEEEcCCC---cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe-cCC
Q psy7108         105 EIVVATL-DG--Q--LIMFDVESA---AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG-QSK  175 (703)
Q Consensus       105 ~las~s~-dg--~--I~vwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s-~dg  175 (703)
                      .|+..+. +|  .  +..|++.++   +.........                    ......+|+|||+.|+..+ .++
T Consensus       244 ~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~--------------------~~~~~p~wSPDG~~Laf~s~~~g  303 (428)
T PRK01029        244 LLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAF--------------------GTQGNPSFSPDGTRLVFVSNKDG  303 (428)
T ss_pred             EEEEEECCCCCcceeEEEeecccCCCCcceEeecCCC--------------------CCcCCeEECCCCCEEEEEECCCC
Confidence            9887653 22  2  344676643   2222222211                    1235679999999888765 456


Q ss_pred             c--EEEEECCC-CceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCcc
Q psy7108         176 Y--ICIYSSRE-GILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEV  252 (703)
Q Consensus       176 ~--I~lwD~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~  252 (703)
                      .  |+++++.. +.....+...        ...+....|||||+.+++....+   +...|.+||+.+++.... .....
T Consensus       304 ~~~ly~~~~~~~g~~~~~lt~~--------~~~~~~p~wSPDG~~Laf~~~~~---g~~~I~v~dl~~g~~~~L-t~~~~  371 (428)
T PRK01029        304 RPRIYIMQIDPEGQSPRLLTKK--------YRNSSCPAWSPDGKKIAFCSVIK---GVRQICVYDLATGRDYQL-TTSPE  371 (428)
T ss_pred             CceEEEEECcccccceEEeccC--------CCCccceeECCCCCEEEEEEcCC---CCcEEEEEECCCCCeEEc-cCCCC
Confidence            4  44445432 2222323211        12456789999999988876532   235799999988876433 33334


Q ss_pred             ceEEEEEcCCCCEEEEEe-CCC---EEEEEcCCCce
Q psy7108         253 RVFCVKFSPTGQAWVAAT-TEG---VHIYSLDSGYV  284 (703)
Q Consensus       253 ~V~~l~~spdg~~l~s~s-~Dg---v~iwd~~~~~~  284 (703)
                      .+....|+|||+.|+..+ .++   +.++++++++.
T Consensus       372 ~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~  407 (428)
T PRK01029        372 NKESPSWAIDSLHLVYSAGNSNESELYLISLITKKT  407 (428)
T ss_pred             CccceEECCCCCEEEEEECCCCCceEEEEECCCCCE
Confidence            567899999999886443 333   78888887754

>KOG1963|consensus

Probab=99.32  E-value=1.2e-10  Score=127.66  Aligned_cols=265  Identities=14%  Similarity=0.183  Sum_probs=185.9

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEc
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDV  120 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~  120 (703)
                      +.+.-|..+|++++|++  +|.+|+||+..|.+.+|.+.+++ ..-+....++|..+.+|||+...+....|+.|.+...
T Consensus       245 t~lHWH~~~V~~L~fS~--~G~~LlSGG~E~VLv~Wq~~T~~-kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~  321 (792)
T KOG1963|consen  245 TLLHWHHDEVNSLSFSS--DGAYLLSGGREGVLVLWQLETGK-KQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKA  321 (792)
T ss_pred             eEEEecccccceeEEec--CCceEeecccceEEEEEeecCCC-cccccccCCeeEEEEEcCCCCeEEEEecCceEEEEec
Confidence            67889999999999999  99999999999999999999886 3444458889999999999999999999999999988


Q ss_pred             CCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccc
Q psy7108         121 ESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLD  200 (703)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~  200 (703)
                      .+.+...++.+-......         ......+-.+.++++|.-+.++-.+..+.|.+||+-+...+..+.........
T Consensus       322 ~dl~~k~tIsgi~~~~~~---------~k~~~~~l~t~~~idpr~~~~vln~~~g~vQ~ydl~td~~i~~~~v~~~n~~~  392 (792)
T KOG1963|consen  322 SDLEIKSTISGIKPPTPS---------TKTRPQSLTTGVSIDPRTNSLVLNGHPGHVQFYDLYTDSTIYKLQVCDENYSD  392 (792)
T ss_pred             cchhhhhhccCccCCCcc---------ccccccccceeEEEcCCCCceeecCCCceEEEEeccccceeeeEEEEeecccC
Confidence            776666555553321000         01122345678899997777888899999999999988777766543322222


Q ss_pred             c---ccccceeeeeccCCCEEEEEcccC----CCCCeeEEECCCCCC----Cccceee-cCCccceEEEEEcC-CCC-EE
Q psy7108         201 G---INDFINRRKMTEFGNVSLIETRET----HEGGNVVLKLPGVKK----GDMAARV-LKPEVRVFCVKFSP-TGQ-AW  266 (703)
Q Consensus       201 ~---~~~~v~~~~~spdg~~l~~~~~~~----~~~~~~~i~iwd~~~----~~~~~~~-~~h~~~V~~l~~sp-dg~-~l  266 (703)
                      +   +...++.++.+..|.++++....-    ..++...+++|-...    ..+...+ ..|...+...++.+ ... ..
T Consensus       393 ~~~n~~v~itav~~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~~~kt~~L~T~I~~PH~~~~vat~~~~~~rs~~~  472 (792)
T KOG1963|consen  393 GDVNIQVGITAVARSRFGSWMATLEARIDKFNFFDGEVSLKFWQYNPNSKTFILNTKINNPHGNAFVATIFLNPTRSVRC  472 (792)
T ss_pred             CcceeEEeeeeehhhccceEEEEeeeeehhhhccCceEEEEEEEEcCCcceeEEEEEEecCCCceeEEEEEecCccccee
Confidence            2   234677778888888877654321    123457889994332    2333333 35666665555544 333 68


Q ss_pred             EEEeCCC-EEEEEcCCCceec----------------ceeeeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108         267 VAATTEG-VHIYSLDSGYVFD----------------PFLLDISITPQSVKEALADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       267 ~s~s~Dg-v~iwd~~~~~~~~----------------~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~  321 (703)
                      ++++.|| ++||.+...+...                ......+|+.||  . +.+.+++..+.+ |+..++
T Consensus       473 vta~~dg~~KiW~~~~~~n~~k~~s~W~c~~i~sy~k~~i~a~~fs~dG--s-lla~s~~~~Iti-wd~~~~  540 (792)
T KOG1963|consen  473 VTASVDGDFKIWVFTDDSNIYKKSSNWTCKAIGSYHKTPITALCFSQDG--S-LLAVSFDDTITI-WDYDTK  540 (792)
T ss_pred             EEeccCCeEEEEEEecccccCcCccceEEeeeeccccCcccchhhcCCC--c-EEEEecCCEEEE-ecCCCh
Confidence            9999999 9999984432211                112457888888  3 445567788887 887776

>KOG3881|consensus

Probab=99.32  E-value=1.1e-10  Score=116.85  Aligned_cols=213  Identities=11%  Similarity=0.159  Sum_probs=157.3

Q ss_pred             ccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc---eeEEEecCCCcEEEEEEecCCCE-EEEEECC--CeEE
Q psy7108          43 LSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD---TQHETIQLLSDALCVAYKPDGTE-IVVATLD--GQLI  116 (703)
Q Consensus        43 l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~---~~~~~~~~~~~V~~v~~spdg~~-las~s~d--g~I~  116 (703)
                      ..+.+++|..++..    ...|++|-.+|.+++|..+.+.   ..........++..+.-++.... +|+|+..  ..+.
T Consensus       101 ~~l~~~~I~gl~~~----dg~Litc~~sG~l~~~~~k~~d~hss~l~~la~g~g~~~~r~~~~~p~Iva~GGke~~n~lk  176 (412)
T KOG3881|consen  101 VSLGTKSIKGLKLA----DGTLITCVSSGNLQVRHDKSGDLHSSKLIKLATGPGLYDVRQTDTDPYIVATGGKENINELK  176 (412)
T ss_pred             cccccccccchhhc----CCEEEEEecCCcEEEEeccCCccccccceeeecCCceeeeccCCCCCceEecCchhccccee
Confidence            34456677776664    3578888899999999987442   12223334456777777776654 5568888  7899


Q ss_pred             EEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC--CCEEEEEecCCcEEEEECCCC-ceEEEEEe
Q psy7108         117 MFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD--GSCILAAGQSKYICIYSSREG-ILLKKFTI  193 (703)
Q Consensus       117 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd--g~~l~s~s~dg~I~lwD~~~~-~~~~~~~~  193 (703)
                      +||+++.+++  +.+.. +......-..        .-.++++.|-+.  ...|++++.-+.+++||.+.+ +++..|..
T Consensus       177 iwdle~~~qi--w~aKN-vpnD~L~LrV--------PvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~  245 (412)
T KOG3881|consen  177 IWDLEQSKQI--WSAKN-VPNDRLGLRV--------PVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDF  245 (412)
T ss_pred             eeecccceee--eeccC-CCCcccccee--------eeeeccceecCCCCCceEEEEecceeEEEecCcccCcceeEecc
Confidence            9999988544  33321 1000000000        115678889887  789999999999999999875 45666654


Q ss_pred             ccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcccee-ecCCccceEEEEEcCCCCEEEEEeCC
Q psy7108         194 TQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAAR-VLKPEVRVFCVKFSPTGQAWVAATTE  272 (703)
Q Consensus       194 ~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~-~~~h~~~V~~l~~spdg~~l~s~s~D  272 (703)
                      ..        ..++++...|+|+.++++...+      .+..+|.+++..... +.+-.+.|.++..+|.++++++++-|
T Consensus       246 ~E--------~~is~~~l~p~gn~Iy~gn~~g------~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~las~GLD  311 (412)
T KOG3881|consen  246 LE--------NPISSTGLTPSGNFIYTGNTKG------QLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPVLASCGLD  311 (412)
T ss_pred             cc--------CcceeeeecCCCcEEEEecccc------hhheecccCceeeccccCCccCCcceEEEcCCCceEEeeccc
Confidence            43        3899999999999999988764      789999999987766 77788999999999999999999999


Q ss_pred             C-EEEEEcCCCce
Q psy7108         273 G-VHIYSLDSGYV  284 (703)
Q Consensus       273 g-v~iwd~~~~~~  284 (703)
                      . ++|+|+++.+.
T Consensus       312 RyvRIhD~ktrkl  324 (412)
T KOG3881|consen  312 RYVRIHDIKTRKL  324 (412)
T ss_pred             eeEEEeecccchh
Confidence            9 99999998554

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.31  E-value=3.1e-10  Score=124.82  Aligned_cols=213  Identities=15%  Similarity=0.227  Sum_probs=138.7

Q ss_pred             ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCC-C--cEEEEEcCCCceeEEEecCCCcEEEEEEecCCC
Q psy7108          28 VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWD-K--TVKLWNAVETDTQHETIQLLSDALCVAYKPDGT  104 (703)
Q Consensus        28 v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~D-g--~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~  104 (703)
                      +.+.|.+|...  +.+..+...+.+.+|+|  ||+.|+..+.+ +  .|.+||+.+++. ..+....+.....+|+|||+
T Consensus       200 l~i~d~dG~~~--~~l~~~~~~~~~p~wSP--DG~~La~~s~~~g~~~L~~~dl~tg~~-~~lt~~~g~~~~~~wSPDG~  274 (448)
T PRK04792        200 LMIADYDGYNE--QMLLRSPEPLMSPAWSP--DGRKLAYVSFENRKAEIFVQDIYTQVR-EKVTSFPGINGAPRFSPDGK  274 (448)
T ss_pred             EEEEeCCCCCc--eEeecCCCcccCceECC--CCCEEEEEEecCCCcEEEEEECCCCCe-EEecCCCCCcCCeeECCCCC
Confidence            34556677655  67777888999999999  99999876543 3  577888877643 33333344455789999999


Q ss_pred             EEEE-EECCCe--EEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec-CC--cEE
Q psy7108         105 EIVV-ATLDGQ--LIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ-SK--YIC  178 (703)
Q Consensus       105 ~las-~s~dg~--I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~-dg--~I~  178 (703)
                      .|+. .+.++.  |+++|+++++... +..+..                    .....+|+|||+.|+..+. ++  .|+
T Consensus       275 ~La~~~~~~g~~~Iy~~dl~tg~~~~-lt~~~~--------------------~~~~p~wSpDG~~I~f~s~~~g~~~Iy  333 (448)
T PRK04792        275 KLALVLSKDGQPEIYVVDIATKALTR-ITRHRA--------------------IDTEPSWHPDGKSLIFTSERGGKPQIY  333 (448)
T ss_pred             EEEEEEeCCCCeEEEEEECCCCCeEE-CccCCC--------------------CccceEECCCCCEEEEEECCCCCceEE
Confidence            8875 455564  8888988776533 222211                    3466899999998877653 33  577


Q ss_pred             EEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEE
Q psy7108         179 IYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVK  258 (703)
Q Consensus       179 lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~  258 (703)
                      ++|+.+++..+. .....        .....+|+|||+.+++....+   +...|.++|+.+++... +... .......
T Consensus       334 ~~dl~~g~~~~L-t~~g~--------~~~~~~~SpDG~~l~~~~~~~---g~~~I~~~dl~~g~~~~-lt~~-~~d~~ps  399 (448)
T PRK04792        334 RVNLASGKVSRL-TFEGE--------QNLGGSITPDGRSMIMVNRTN---GKFNIARQDLETGAMQV-LTST-RLDESPS  399 (448)
T ss_pred             EEECCCCCEEEE-ecCCC--------CCcCeeECCCCCEEEEEEecC---CceEEEEEECCCCCeEE-ccCC-CCCCCce
Confidence            788887765332 21111        223568999999988866532   22467778888776432 2222 1223457


Q ss_pred             EcCCCCEEEEEeCC-C---EEEEEcC
Q psy7108         259 FSPTGQAWVAATTE-G---VHIYSLD  280 (703)
Q Consensus       259 ~spdg~~l~s~s~D-g---v~iwd~~  280 (703)
                      |+|||+.++..+.+ +   +.+++.+
T Consensus       400 ~spdG~~I~~~~~~~g~~~l~~~~~~  425 (448)
T PRK04792        400 VAPNGTMVIYSTTYQGKQVLAAVSID  425 (448)
T ss_pred             ECCCCCEEEEEEecCCceEEEEEECC
Confidence            99999998665544 3   5566664

>KOG4497|consensus

Probab=99.30  E-value=7.9e-12  Score=122.03  Aligned_cols=218  Identities=16%  Similarity=0.191  Sum_probs=155.9

Q ss_pred             EEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEE-EECCCeEEEEEcCCCcEEEEEec
Q psy7108          53 IEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVV-ATLDGQLIMFDVESAAQVGSVEA  131 (703)
Q Consensus        53 l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las-~s~dg~I~vwd~~~~~~~~~~~~  131 (703)
                      .+|||  +|+++|+++.- .+.|-|.++-+ +.+++..-..|.-+.|..|..++++ ...|+.|.+|++...+-...++.
T Consensus        14 c~fSp--~g~yiAs~~~y-rlviRd~~tlq-~~qlf~cldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIde   89 (447)
T KOG4497|consen   14 CSFSP--CGNYIASLSRY-RLVIRDSETLQ-LHQLFLCLDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDE   89 (447)
T ss_pred             eeECC--CCCeeeeeeee-EEEEeccchhh-HHHHHHHHHHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEecc
Confidence            57999  99999999876 67777776653 3333344567788999988876655 46688999999998887777776


Q ss_pred             cccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEE-EecCCcEEEEECCCCceEEEEEeccCCccccccccceeee
Q psy7108         132 RRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILA-AGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRK  210 (703)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s-~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  210 (703)
                      ..+                    ++.+++|||||+.|+. ..-|-.|.+|.+.+.+....-  +..       ..+..++
T Consensus        90 g~a--------------------gls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~~--~pK-------~~~kg~~  140 (447)
T KOG4497|consen   90 GQA--------------------GLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLLP--HPK-------TNVKGYA  140 (447)
T ss_pred             CCC--------------------cceeeeECCCcceEeeeecceeEEEEEEeccceeEEec--ccc-------cCceeEE
Confidence            554                    8999999999977665 456788999999887654321  111       2457799


Q ss_pred             eccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCC--C-EEEEEcCCCceecc
Q psy7108         211 MTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTE--G-VHIYSLDSGYVFDP  287 (703)
Q Consensus       211 ~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~D--g-v~iwd~~~~~~~~~  287 (703)
                      |+|||++.++.+..+..+   .+.+...+..+.+..+.-..-..+++.|+|||+.||+-.+-  - |..|....|-    
T Consensus       141 f~~dg~f~ai~sRrDCkd---yv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Leykv~aYe~~lG~----  213 (447)
T KOG4497|consen  141 FHPDGQFCAILSRRDCKD---YVQISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYKVYAYERGLGL----  213 (447)
T ss_pred             ECCCCceeeeeecccHHH---HHHHHhhHHHHHHHhcCCCcccccCceECCCCcEEEEecchhhheeeeeeeccce----
Confidence            999999988877653111   23333333445555555566678899999999998865432  2 4455544332    


Q ss_pred             eeeeEEEccchhhhHhhcCCcceEEEE
Q psy7108         288 FLLDISITPQSVKEALADKDYAKALMM  314 (703)
Q Consensus       288 ~~~~~~~spd~~~~~l~sg~~~~~l~l  314 (703)
                        ..++++|-+  ++++.|++|+.+++
T Consensus       214 --k~v~wsP~~--qflavGsyD~~lrv  236 (447)
T KOG4497|consen  214 --KFVEWSPCN--QFLAVGSYDQMLRV  236 (447)
T ss_pred             --eEEEecccc--ceEEeeccchhhhh
Confidence              357899988  89999999998886

>KOG0322|consensus

Probab=99.30  E-value=4.4e-11  Score=113.76  Aligned_cols=223  Identities=15%  Similarity=0.229  Sum_probs=158.0

Q ss_pred             ceeecc-CCCcccccccc-CCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCcee--------------E------
Q psy7108          28 VKKGDM-AARVLKPEVLS-GHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQ--------------H------   85 (703)
Q Consensus        28 v~~~d~-tg~~~~~~~l~-gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~--------------~------   85 (703)
                      +..|+. +.+..  -.++ .|+..|+.+.--|  + +.|.+-+.|..+.+|++..+.-+              .      
T Consensus        37 V~~w~lqt~r~~--~~~r~~g~~~it~lq~~p--~-d~l~tqgRd~~L~lw~ia~s~~i~i~Si~~nslgFCrfSl~~~~  111 (323)
T KOG0322|consen   37 VKMWVLQTERDL--PLIRLFGRLFITNLQSIP--N-DSLDTQGRDPLLILWTIAYSAFISIHSIVVNSLGFCRFSLVKKP  111 (323)
T ss_pred             EEEEEeecCccc--hhhhhhccceeeceeecC--C-cchhhcCCCceEEEEEccCcceEEEeeeeccccccccceeccCC
Confidence            334443 33444  4556 5788999999988  4 77889999999999998652100              0      


Q ss_pred             ----EEe-----------------------------cCCCcEEEEEEec-CCC--EEEEEECCCeEEEEEcCCCcEEEEE
Q psy7108          86 ----ETI-----------------------------QLLSDALCVAYKP-DGT--EIVVATLDGQLIMFDVESAAQVGSV  129 (703)
Q Consensus        86 ----~~~-----------------------------~~~~~V~~v~~sp-dg~--~las~s~dg~I~vwd~~~~~~~~~~  129 (703)
                          +..                             ...+.+.|..+.. +++  .+++|-.+|.+.+||+.++..+-.+
T Consensus       112 k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~  191 (323)
T KOG0322|consen  112 KNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQL  191 (323)
T ss_pred             CcchhheecCCcccchhhhhccCccceeEccCchhccccCceeeeeccccccceEEEEEeccCCeEEEEEccCCceeecc
Confidence                000                             0012345544322 233  4567778999999999998665544


Q ss_pred             eccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCC--ceE--EEEEeccCCcccccccc
Q psy7108         130 EARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREG--ILL--KKFTITQNKSLDGINDF  205 (703)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~--~~~--~~~~~~~~~~~~~~~~~  205 (703)
                      +...          ........|.++|.++.|.+.-..=++|+.+..+..|.+...  .+.  ...+..        ...
T Consensus       192 ~~~~----------kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~~~e~~lk--------npG  253 (323)
T KOG0322|consen  192 PQSS----------KVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQIRKEITLK--------NPG  253 (323)
T ss_pred             cccc----------ccccchhhccCcceeeeechhhcCCcCCCccccceeeeeccccCcccccceEEec--------CCC
Confidence            4322          223334557779999999876555667888888889988643  221  111111        125


Q ss_pred             ceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEc
Q psy7108         206 INRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSL  279 (703)
Q Consensus       206 v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~  279 (703)
                      +..+.+-||++.+++++.++      .+++|..++.+++..+.-|...|++++|+|+...+|+++.|+ |.+|++
T Consensus       254 v~gvrIRpD~KIlATAGWD~------RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL  322 (323)
T KOG0322|consen  254 VSGVRIRPDGKILATAGWDH------RIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL  322 (323)
T ss_pred             ccceEEccCCcEEeecccCC------cEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence            77889999999999988875      899999999999999999999999999999999999999999 999986

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.30  E-value=4.2e-10  Score=123.82  Aligned_cols=193  Identities=15%  Similarity=0.130  Sum_probs=132.5

Q ss_pred             cEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEEC---CCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhh
Q psy7108          72 TVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATL---DGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTRE  148 (703)
Q Consensus        72 ~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~---dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (703)
                      .|.+||.... ....+..+...+.+.+|+|||+.|+..+.   +..|++||+.+++... +....               
T Consensus       183 ~l~~~d~dg~-~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~~-l~~~~---------------  245 (435)
T PRK05137        183 RLAIMDQDGA-NVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQREL-VGNFP---------------  245 (435)
T ss_pred             EEEEECCCCC-CcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEEE-eecCC---------------
Confidence            6778887443 55666778889999999999999988764   4689999998886543 32222               


Q ss_pred             cccCCccEEEEEEcCCCCEEEE-EecCCc--EEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccC
Q psy7108         149 QSLKAKAVSTVCYSADGSCILA-AGQSKY--ICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRET  225 (703)
Q Consensus       149 ~~~~~~~V~~i~~spdg~~l~s-~s~dg~--I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~  225 (703)
                           +.+...+|+|||+.|+. .+.++.  |++||+.++...+ +..+.        .......|+|||+.+++.+..+
T Consensus       246 -----g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~~-Lt~~~--------~~~~~~~~spDG~~i~f~s~~~  311 (435)
T PRK05137        246 -----GMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGTTTR-LTDSP--------AIDTSPSYSPDGSQIVFESDRS  311 (435)
T ss_pred             -----CcccCcEECCCCCEEEEEEecCCCceEEEEECCCCceEE-ccCCC--------CccCceeEcCCCCEEEEEECCC
Confidence                 14667899999998764 455554  8888998876533 32211        2456689999999988776432


Q ss_pred             CCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC----EEEEEcCCCceecc----eeeeEEEccc
Q psy7108         226 HEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG----VHIYSLDSGYVFDP----FLLDISITPQ  297 (703)
Q Consensus       226 ~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg----v~iwd~~~~~~~~~----~~~~~~~spd  297 (703)
                         +...|.++|+..++.. .+..+...+....|+|||+.++..+.++    +.+|++.++.....    ......|+||
T Consensus       312 ---g~~~Iy~~d~~g~~~~-~lt~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~~~lt~~~~~~~p~~spD  387 (435)
T PRK05137        312 ---GSPQLYVMNADGSNPR-RISFGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSGERILTSGFLVEGPTWAPN  387 (435)
T ss_pred             ---CCCeEEEEECCCCCeE-EeecCCCcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCceEeccCCCCCCCCeECCC
Confidence               2247888898766543 3433445567789999999997766432    77888765443111    1245789999


Q ss_pred             hh
Q psy7108         298 SV  299 (703)
Q Consensus       298 ~~  299 (703)
                      +.
T Consensus       388 G~  389 (435)
T PRK05137        388 GR  389 (435)
T ss_pred             CC
Confidence            83

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.29  E-value=3.1e-10  Score=124.22  Aligned_cols=183  Identities=15%  Similarity=0.165  Sum_probs=124.6

Q ss_pred             cccCCCcCeEEEEEcCCCCCCEEEEE-eCCC--cEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECC-C--eE
Q psy7108          42 VLSGHEGPVSCIEFSPVLSSTGMVSA-SWDK--TVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLD-G--QL  115 (703)
Q Consensus        42 ~l~gH~~~V~~l~~sp~~dg~~L~sg-s~Dg--~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~d-g--~I  115 (703)
                      .+....+.+.+++|+|  ||+.|+.. +.+|  .|.+||+.++. ...+..+...+...+|+|||+.|+.++.+ +  .|
T Consensus       237 ~l~~~~~~~~~~~~SP--DG~~La~~~~~~g~~~I~~~d~~tg~-~~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~I  313 (429)
T PRK03629        237 QVASFPRHNGAPAFSP--DGSKLAFALSKTGSLNLYVMDLASGQ-IRQVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQV  313 (429)
T ss_pred             EccCCCCCcCCeEECC--CCCEEEEEEcCCCCcEEEEEECCCCC-EEEccCCCCCcCceEECCCCCEEEEEeCCCCCceE
Confidence            3333444456789999  99988865 4455  48888987764 44555555677889999999999877764 3  46


Q ss_pred             EEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC---CcEEEEECCCCceEEEEE
Q psy7108         116 IMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS---KYICIYSSREGILLKKFT  192 (703)
Q Consensus       116 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d---g~I~lwD~~~~~~~~~~~  192 (703)
                      +++|+.+++... +....                    ......+|+|||++|+..+.+   ..|.+||+.++... .+.
T Consensus       314 y~~d~~~g~~~~-lt~~~--------------------~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~-~Lt  371 (429)
T PRK03629        314 YKVNINGGAPQR-ITWEG--------------------SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLT  371 (429)
T ss_pred             EEEECCCCCeEE-eecCC--------------------CCccCEEECCCCCEEEEEEccCCCceEEEEECCCCCeE-EeC
Confidence            666777665432 22211                    134568899999999876543   35889999887643 232


Q ss_pred             eccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCC
Q psy7108         193 ITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPT  262 (703)
Q Consensus       193 ~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spd  262 (703)
                      .. .        ......|+|||+.+++++.++   +...+.++++ .|.....+..|.+.+...+|+|-
T Consensus       372 ~~-~--------~~~~p~~SpDG~~i~~~s~~~---~~~~l~~~~~-~G~~~~~l~~~~~~~~~p~Wsp~  428 (429)
T PRK03629        372 DT-F--------LDETPSIAPNGTMVIYSSSQG---MGSVLNLVST-DGRFKARLPATDGQVKFPAWSPY  428 (429)
T ss_pred             CC-C--------CCCCceECCCCCEEEEEEcCC---CceEEEEEEC-CCCCeEECccCCCCcCCcccCCC
Confidence            11 0        223578999999999888653   2346788887 45555667778888889999873

>KOG4227|consensus

Probab=99.29  E-value=1.1e-10  Score=116.26  Aligned_cols=280  Identities=11%  Similarity=0.077  Sum_probs=178.1

Q ss_pred             cccceeeEE-----eeecccCCceEEecCCcee--eccCCCcccccccc-CCCcCeEEEEEcCCCCCCEEEEEeCCCcEE
Q psy7108           3 EFGNVSLIE-----TRETHEGGNVVLKLPGVKK--GDMAARVLKPEVLS-GHEGPVSCIEFSPVLSSTGMVSASWDKTVK   74 (703)
Q Consensus         3 ~~g~~~~~~-----~~~~~~~~~~~i~~~~v~~--~d~tg~~~~~~~l~-gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~   74 (703)
                      ++||+..+.     ...+..|.+..+++|++..  -.++.+++  .... .|...|.|++|..  ...++++|..+++|.
T Consensus        55 H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI--~~~~~~H~SNIF~L~F~~--~N~~~~SG~~~~~VI  130 (609)
T KOG4227|consen   55 HTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPI--GVMEHPHRSNIFSLEFDL--ENRFLYSGERWGTVI  130 (609)
T ss_pred             hccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCc--eeccCccccceEEEEEcc--CCeeEecCCCcceeE
Confidence            356665544     2233345566667777542  23445555  3333 3568999999998  889999999999999


Q ss_pred             EEEcCCCceeEEEecCCC---cEEEEEEecCCCEEEEEECCCeEEEEEcCCCcE-EEEEeccccCCCCCCCCccchhhcc
Q psy7108          75 LWNAVETDTQHETIQLLS---DALCVAYKPDGTEIVVATLDGQLIMFDVESAAQ-VGSVEARRDLDSGRLDTDLVTREQS  150 (703)
Q Consensus        75 iWd~~~~~~~~~~~~~~~---~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  150 (703)
                      +.|+++.+. ..+..|..   .|+.+..+|..+.+++.+.++.|.+||.+..+. ...+...                  
T Consensus       131 ~HDiEt~qs-i~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~A------------------  191 (609)
T KOG4227|consen  131 KHDIETKQS-IYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPA------------------  191 (609)
T ss_pred             eeeccccee-eeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeec------------------
Confidence            999988854 44555544   899999999999999999999999999986652 1111111                  


Q ss_pred             cCCccEEEEEEcCCC-CEEEEEecCCcEEEEECCCCce-EEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCC
Q psy7108         151 LKAKAVSTVCYSADG-SCILAAGQSKYICIYSSREGIL-LKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEG  228 (703)
Q Consensus       151 ~~~~~V~~i~~spdg-~~l~s~s~dg~I~lwD~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~  228 (703)
                      ..+....++.|+|.. .+|++.+..+-+.+||.+.... +....+  ...+......-.++.|+|.|..+++--..    
T Consensus       192 N~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~--~~~L~~~~~~~M~~~~~~~G~Q~msiRR~----  265 (609)
T KOG4227|consen  192 NSGKNFYTAEFHPETPALILVNSETGGPNVFDRRMQARPVYQRSM--FKGLPQENTEWMGSLWSPSGNQFMSIRRG----  265 (609)
T ss_pred             CCCccceeeeecCCCceeEEeccccCCCCceeeccccchHHhhhc--cccCcccchhhhheeeCCCCCeehhhhcc----
Confidence            112367889999954 6677788888899999986432 211111  11122212233567899999987664432    


Q ss_pred             CeeEEECCCCCCCccceeecCCc-------cceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCce----------------
Q psy7108         229 GNVVLKLPGVKKGDMAARVLKPE-------VRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYV----------------  284 (703)
Q Consensus       229 ~~~~i~iwd~~~~~~~~~~~~h~-------~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~----------------  284 (703)
                        ..-.+||+.+..+......|+       ..+.+++|-.|- .+++|+.+= +++|.+.....                
T Consensus       266 --~~P~~~D~~S~R~~V~k~D~N~~GY~N~~T~KS~~F~~D~-~v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~  342 (609)
T KOG4227|consen  266 --KCPLYFDFISQRCFVLKSDHNPNGYCNIKTIKSMTFIDDY-TVATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPS  342 (609)
T ss_pred             --CCCEEeeeecccceeEeccCCCCcceeeeeeeeeeeecce-eeeccCcccceEEEecCCCccccCccccCcchhhCch
Confidence              233456666544332222222       236677886554 478888776 99999863211                


Q ss_pred             -------------ecceeeeEEEccchhhhHhhcCCcceEEEEEEe
Q psy7108         285 -------------FDPFLLDISITPQSVKEALADKDYAKALMMSLK  317 (703)
Q Consensus       285 -------------~~~~~~~~~~spd~~~~~l~sg~~~~~l~la~~  317 (703)
                                   +......+.|+|..  .++.+.+-.+.+++ |.
T Consensus       343 ~~~i~~~~~VLrGHRSv~NQVRF~~H~--~~l~SSGVE~~~Kl-WS  385 (609)
T KOG4227|consen  343 EIFIEKELTVLRGHRSVPNQVRFSQHN--NLLVSSGVENSFKL-WS  385 (609)
T ss_pred             hheecceeEEEecccccccceeecCCc--ceEeccchhhheec-cc
Confidence                         01112347777776  66666666666666 54

>KOG1523|consensus

Probab=99.27  E-value=1.8e-10  Score=112.61  Aligned_cols=206  Identities=13%  Similarity=0.190  Sum_probs=146.5

Q ss_pred             CccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc---eeEEEecCCCcEEEEEEecCCCEEEEEECC
Q psy7108          36 RVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD---TQHETIQLLSDALCVAYKPDGTEIVVATLD  112 (703)
Q Consensus        36 ~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~---~~~~~~~~~~~V~~v~~spdg~~las~s~d  112 (703)
                      +..  +++..|...|++++|+|  ..+.|++|+.|..-.+|....+.   ....++.+...++++.|+|.++.+|+|+..
T Consensus        46 ~~~--htls~Hd~~vtgvdWap--~snrIvtcs~drnayVw~~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSga  121 (361)
T KOG1523|consen   46 EPA--HTLSEHDKIVTGVDWAP--KSNRIVTCSHDRNAYVWTQPSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGA  121 (361)
T ss_pred             eec--eehhhhCcceeEEeecC--CCCceeEccCCCCccccccCCCCeeccceeEEEeccceeeEeecCcCceEEeccCc
Confidence            445  89999999999999999  89999999999999999984443   456677899999999999999999999999


Q ss_pred             CeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEE
Q psy7108         113 GQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFT  192 (703)
Q Consensus       113 g~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~  192 (703)
                      +.|.||-.+...---. ..|               ....+...|++++|+|++-+|++|+.|+.++++..--    +..+
T Consensus       122 r~isVcy~E~ENdWWV-sKh---------------ikkPirStv~sldWhpnnVLlaaGs~D~k~rVfSayI----K~Vd  181 (361)
T KOG1523|consen  122 RLISVCYYEQENDWWV-SKH---------------IKKPIRSTVTSLDWHPNNVLLAAGSTDGKCRVFSAYI----KGVD  181 (361)
T ss_pred             cEEEEEEEecccceeh-hhh---------------hCCccccceeeeeccCCcceecccccCcceeEEEEee----eccc
Confidence            9999987754321100 000               0011233799999999999999999999999986421    1111


Q ss_pred             eccC--------------CccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCc-cceeecCCccceEEE
Q psy7108         193 ITQN--------------KSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGD-MAARVLKPEVRVFCV  257 (703)
Q Consensus       193 ~~~~--------------~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~-~~~~~~~h~~~V~~l  257 (703)
                      ..+.              ........++..+.|+|+|..++..+.++      .+.+-|..... .+......+-+..++
T Consensus       182 ekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds------~v~~~da~~p~~~v~~~~~~~lP~ls~  255 (361)
T KOG1523|consen  182 EKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDS------TVSFVDAAGPSERVQSVATAQLPLLSV  255 (361)
T ss_pred             cCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCC------ceEEeecCCCchhccchhhccCCceee
Confidence            0000              01112335899999999999999888764      67777765543 333444444677788


Q ss_pred             EEcCCCCEEEEEeCC
Q psy7108         258 KFSPTGQAWVAATTE  272 (703)
Q Consensus       258 ~~spdg~~l~s~s~D  272 (703)
                      .|-.+. .++.++.|
T Consensus       256 ~~ise~-~vv~ag~~  269 (361)
T KOG1523|consen  256 SWISEN-SVVAAGYD  269 (361)
T ss_pred             EeecCC-ceeecCCC
Confidence            886554 45555555

>KOG1272|consensus

Probab=99.27  E-value=1e-11  Score=126.53  Aligned_cols=204  Identities=16%  Similarity=0.158  Sum_probs=162.6

Q ss_pred             ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEE
Q psy7108          28 VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIV  107 (703)
Q Consensus        28 v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~la  107 (703)
                      +-++|..|..+  +.+..| ..|..+.|-|  .--+|++++..|.++--|+.+|+.+..+....+.+..++-+|-+..+-
T Consensus       193 ~yvYD~~GtEl--HClk~~-~~v~rLeFLP--yHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih  267 (545)
T KOG1272|consen  193 VYVYDNNGTEL--HCLKRH-IRVARLEFLP--YHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIH  267 (545)
T ss_pred             EEEecCCCcEE--eehhhc-Cchhhhcccc--hhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEE
Confidence            55678889888  888876 5689999999  888899999999999999999988888777888899999999999999


Q ss_pred             EEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCce
Q psy7108         108 VATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGIL  187 (703)
Q Consensus       108 s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~  187 (703)
                      +|...|+|.+|.....+++..+-+|..                    +|.++++.++|+++++++.|..++|||++....
T Consensus       268 ~GhsnGtVSlWSP~skePLvKiLcH~g--------------------~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~q  327 (545)
T KOG1272|consen  268 LGHSNGTVSLWSPNSKEPLVKILCHRG--------------------PVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQ  327 (545)
T ss_pred             EcCCCceEEecCCCCcchHHHHHhcCC--------------------CcceEEECCCCcEEeecccccceeEeeeccccc
Confidence            999999999999998888877777765                    899999999999999999999999999998776


Q ss_pred             EEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECC-CCCCCc--cceeecCC--ccceEEEEEcCC
Q psy7108         188 LKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLP-GVKKGD--MAARVLKP--EVRVFCVKFSPT  262 (703)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iw-d~~~~~--~~~~~~~h--~~~V~~l~~spd  262 (703)
                      +.++..+.         ....+++|..|-. +++.++       .+.+| |.-.+.  ....+..|  .+.|.++.|+|-
T Consensus       328 l~t~~tp~---------~a~~ls~SqkglL-A~~~G~-------~v~iw~d~~~~s~~~~~pYm~H~~~~~V~~l~FcP~  390 (545)
T KOG1272|consen  328 LHTYRTPH---------PASNLSLSQKGLL-ALSYGD-------HVQIWKDALKGSGHGETPYMNHRCGGPVEDLRFCPY  390 (545)
T ss_pred             cceeecCC---------Cccccccccccce-eeecCC-------eeeeehhhhcCCCCCCcchhhhccCcccccceeccH
Confidence            65554311         4456777766543 333322       68899 433322  11122223  457999999999


Q ss_pred             CCEEEEEeCCC
Q psy7108         263 GQAWVAATTEG  273 (703)
Q Consensus       263 g~~l~s~s~Dg  273 (703)
                      ...|..|...|
T Consensus       391 EDvLGIGH~~G  401 (545)
T KOG1272|consen  391 EDVLGIGHAGG  401 (545)
T ss_pred             HHeeeccccCC
Confidence            99999998888

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.26  E-value=3.3e-10  Score=124.45  Aligned_cols=194  Identities=13%  Similarity=0.151  Sum_probs=131.3

Q ss_pred             CcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECC---CeEEEEEcCCCcEEEEEeccccCCCCCCCCccchh
Q psy7108          71 KTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLD---GQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTR  147 (703)
Q Consensus        71 g~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~d---g~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (703)
                      .+|.+||.... ....+..+...+.+.+|+|||+.|++++.+   ..|++||+.+++.... .....             
T Consensus       184 ~~l~i~D~~g~-~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~l-~~~~g-------------  248 (433)
T PRK04922        184 YALQVADSDGY-NPQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRELV-ASFRG-------------  248 (433)
T ss_pred             EEEEEECCCCC-CceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEEe-ccCCC-------------
Confidence            36888997543 556666778889999999999999988743   4699999988765432 22111             


Q ss_pred             hcccCCccEEEEEEcCCCCEEEE-EecCC--cEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEccc
Q psy7108         148 EQSLKAKAVSTVCYSADGSCILA-AGQSK--YICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRE  224 (703)
Q Consensus       148 ~~~~~~~~V~~i~~spdg~~l~s-~s~dg--~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~  224 (703)
                             ...+.+|+|||+.|+. .+.++  .|++||+.+++... +..+.        .....++|+|||+.+++.+..
T Consensus       249 -------~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~~~-lt~~~--------~~~~~~~~spDG~~l~f~sd~  312 (433)
T PRK04922        249 -------INGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSRQLTR-LTNHF--------GIDTEPTWAPDGKSIYFTSDR  312 (433)
T ss_pred             -------CccCceECCCCCEEEEEEeCCCCceEEEEECCCCCeEE-CccCC--------CCccceEECCCCCEEEEEECC
Confidence                   3457899999998764 45555  59999999876533 22111        134568999999988887643


Q ss_pred             CCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCC-C---EEEEEcCCCceecc----eeeeEEEcc
Q psy7108         225 THEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTE-G---VHIYSLDSGYVFDP----FLLDISITP  296 (703)
Q Consensus       225 ~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~D-g---v~iwd~~~~~~~~~----~~~~~~~sp  296 (703)
                      +   +...+.++|+.+++... +..+.......+|||||+.++..+.+ +   |.+|++.+++...-    ......|+|
T Consensus       313 ~---g~~~iy~~dl~~g~~~~-lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~~Lt~~~~~~~p~~sp  388 (433)
T PRK04922        313 G---GRPQIYRVAASGGSAER-LTFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVRTLTPGSLDESPSFAP  388 (433)
T ss_pred             C---CCceEEEEECCCCCeEE-eecCCCCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeEECCCCCCCCCceECC
Confidence            2   22357777877765432 22233344578999999999766543 2   88999987765311    224568999


Q ss_pred             chh
Q psy7108         297 QSV  299 (703)
Q Consensus       297 d~~  299 (703)
                      |+.
T Consensus       389 dG~  391 (433)
T PRK04922        389 NGS  391 (433)
T ss_pred             CCC
Confidence            983

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.24  E-value=5.4e-10  Score=122.41  Aligned_cols=193  Identities=15%  Similarity=0.183  Sum_probs=124.3

Q ss_pred             cEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECC---CeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhh
Q psy7108          72 TVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLD---GQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTRE  148 (703)
Q Consensus        72 ~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~d---g~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (703)
                      .+.++|. ++.....+..+...+.+.+|+|||+.|+..+.+   ..|++||+.+++.... ....               
T Consensus       177 ~L~~~D~-dG~~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l-~~~~---------------  239 (427)
T PRK02889        177 QLQISDA-DGQNAQSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVV-ANFK---------------  239 (427)
T ss_pred             EEEEECC-CCCCceEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEe-ecCC---------------
Confidence            4666665 343455666788889999999999999887753   3599999998875433 2111               


Q ss_pred             cccCCccEEEEEEcCCCCEEEE-EecCCcEEEE--ECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccC
Q psy7108         149 QSLKAKAVSTVCYSADGSCILA-AGQSKYICIY--SSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRET  225 (703)
Q Consensus       149 ~~~~~~~V~~i~~spdg~~l~s-~s~dg~I~lw--D~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~  225 (703)
                           +.+.+.+|+|||+.|+. .+.++...+|  |+.++. ...+..+        ........|+|||+.+++.+..+
T Consensus       240 -----g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~-~~~lt~~--------~~~~~~~~wSpDG~~l~f~s~~~  305 (427)
T PRK02889        240 -----GSNSAPAWSPDGRTLAVALSRDGNSQIYTVNADGSG-LRRLTQS--------SGIDTEPFFSPDGRSIYFTSDRG  305 (427)
T ss_pred             -----CCccceEECCCCCEEEEEEccCCCceEEEEECCCCC-cEECCCC--------CCCCcCeEEcCCCCEEEEEecCC
Confidence                 14567899999998874 5667765555  555444 2333211        12345678999999888765432


Q ss_pred             CCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC----EEEEEcCCCceecc----eeeeEEEccc
Q psy7108         226 HEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG----VHIYSLDSGYVFDP----FLLDISITPQ  297 (703)
Q Consensus       226 ~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg----v~iwd~~~~~~~~~----~~~~~~~spd  297 (703)
                         +...+...+..+++... +..........+|||||++++..+.++    |.+|++.+++....    ......|+||
T Consensus       306 ---g~~~Iy~~~~~~g~~~~-lt~~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~~lt~~~~~~~p~~spd  381 (427)
T PRK02889        306 ---GAPQIYRMPASGGAAQR-VTFTGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVTALTDTTRDESPSFAPN  381 (427)
T ss_pred             ---CCcEEEEEECCCCceEE-EecCCCCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeEEccCCCCccCceECCC
Confidence               22345555655554322 222223344678999999998766543    88999987765321    1245789999


Q ss_pred             hh
Q psy7108         298 SV  299 (703)
Q Consensus       298 ~~  299 (703)
                      +.
T Consensus       382 g~  383 (427)
T PRK02889        382 GR  383 (427)
T ss_pred             CC
Confidence            83

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.24  E-value=1.9e-09  Score=114.82  Aligned_cols=254  Identities=17%  Similarity=0.174  Sum_probs=151.1

Q ss_pred             CCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEE-CC
Q psy7108          34 AARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVAT-LD  112 (703)
Q Consensus        34 tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s-~d  112 (703)
                      +.+.+  ..+......-..+.|+|  ||+++++++.||.|.++|+.+.+.+.++ .......++++|+||++++++. .+
T Consensus        25 t~~~~--~~i~~~~~~h~~~~~s~--Dgr~~yv~~rdg~vsviD~~~~~~v~~i-~~G~~~~~i~~s~DG~~~~v~n~~~   99 (369)
T PF02239_consen   25 TNKVV--ARIPTGGAPHAGLKFSP--DGRYLYVANRDGTVSVIDLATGKVVATI-KVGGNPRGIAVSPDGKYVYVANYEP   99 (369)
T ss_dssp             T-SEE--EEEE-STTEEEEEE-TT---SSEEEEEETTSEEEEEETTSSSEEEEE-E-SSEEEEEEE--TTTEEEEEEEET
T ss_pred             CCeEE--EEEcCCCCceeEEEecC--CCCEEEEEcCCCeEEEEECCcccEEEEE-ecCCCcceEEEcCCCCEEEEEecCC
Confidence            56667  77765544445578999  9999999999999999999998755555 4455678999999999998775 58


Q ss_pred             CeEEEEEcCCCcEEEEEeccccCC---CCC--------CCC---------c-----------cchhhcccCCccEEEEEE
Q psy7108         113 GQLIMFDVESAAQVGSVEARRDLD---SGR--------LDT---------D-----------LVTREQSLKAKAVSTVCY  161 (703)
Q Consensus       113 g~I~vwd~~~~~~~~~~~~~~~~~---~~~--------~~~---------~-----------~~~~~~~~~~~~V~~i~~  161 (703)
                      +.+.++|.++.+.+..+.......   ..+        ...         .           .........+.......|
T Consensus       100 ~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~~~~i~~g~~~~D~~~  179 (369)
T PF02239_consen  100 GTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLKVTTIKVGRFPHDGGF  179 (369)
T ss_dssp             TEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEEEEEEE--TTEEEEEE
T ss_pred             CceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccceeeeccccccccccc
Confidence            999999999999888775432110   000        000         0           000001112345667899


Q ss_pred             cCCCCEEEEE-ecCCcEEEEECCCCceEEEEEec-------------cCC----------------------c-------
Q psy7108         162 SADGSCILAA-GQSKYICIYSSREGILLKKFTIT-------------QNK----------------------S-------  198 (703)
Q Consensus       162 spdg~~l~s~-s~dg~I~lwD~~~~~~~~~~~~~-------------~~~----------------------~-------  198 (703)
                      +|++++++++ ..++.|-++|.++++.+..+...             ...                      .       
T Consensus       180 dpdgry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~~w  259 (369)
T PF02239_consen  180 DPDGRYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGFGPVWATSGLGYFAIPLIGTDPVSVHDDYAW  259 (369)
T ss_dssp             -TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTTEEEEEEEBSSSSEEEEEE--TTT-STTTBT
T ss_pred             CcccceeeecccccceeEEEeeccceEEEEeeccccccccccccccCCCcceEEeeccccceecccccCCccccchhhcC
Confidence            9999988775 45678999999888766543211             000                      0       


Q ss_pred             -----cccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC-CccceEEEEEcCCCCEEEEEe--
Q psy7108         199 -----LDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK-PEVRVFCVKFSPTGQAWVAAT--  270 (703)
Q Consensus       199 -----~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~-h~~~V~~l~~spdg~~l~s~s--  270 (703)
                           ++.. ..-..+..+|+++++.+....+.+  ...|.++|.++.+....+.. ....+..+.|++||+.+..+.  
T Consensus       260 kvv~~I~~~-G~glFi~thP~s~~vwvd~~~~~~--~~~v~viD~~tl~~~~~i~~~~~~~~~h~ef~~dG~~v~vS~~~  336 (369)
T PF02239_consen  260 KVVKTIPTQ-GGGLFIKTHPDSRYVWVDTFLNPD--ADTVQVIDKKTLKVVKTITPGPGKRVVHMEFNPDGKEVWVSVWD  336 (369)
T ss_dssp             SEEEEEE-S-SSS--EE--TT-SEEEEE-TT-SS--HT-EEEEECCGTEEEE-HHHHHT--EEEEEE-TTSSEEEEEEE-
T ss_pred             eEEEEEECC-CCcceeecCCCCccEEeeccCCCC--CceEEEEECcCcceeEEEeccCCCcEeccEECCCCCEEEEEEec
Confidence                 0000 111345678999999998333222  35899999998866555542 223588999999999874433  


Q ss_pred             CCC-EEEEEcCCCceecceeeeEEEccch
Q psy7108         271 TEG-VHIYSLDSGYVFDPFLLDISITPQS  298 (703)
Q Consensus       271 ~Dg-v~iwd~~~~~~~~~~~~~~~~spd~  298 (703)
                      .++ |.|||..+.+....+.   ..+|.|
T Consensus       337 ~~~~i~v~D~~Tl~~~~~i~---~~tP~G  362 (369)
T PF02239_consen  337 GNGAIVVYDAKTLKEKKRIP---VPTPTG  362 (369)
T ss_dssp             -TTEEEEEETTTTEEEEEEE-----SEEE
T ss_pred             CCCEEEEEECCCcEEEEEEE---eeCCCe
Confidence            343 9999999998877665   445655

...

>KOG1963|consensus

Probab=99.24  E-value=8.3e-10  Score=121.24  Aligned_cols=246  Identities=9%  Similarity=0.120  Sum_probs=170.9

Q ss_pred             cCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCC--Cc--eeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEE
Q psy7108          44 SGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVE--TD--TQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFD  119 (703)
Q Consensus        44 ~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~--~~--~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd  119 (703)
                      .-|...++|.++||  +++++|+|..||.|.+|.--.  +.  ....+.-|...|.+++|++||.+|++|+..+.+.+|.
T Consensus       202 ~~Htf~~t~~~~sp--n~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq  279 (792)
T KOG1963|consen  202 VHHTFNITCVALSP--NERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQ  279 (792)
T ss_pred             hhhcccceeEEecc--ccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEe
Confidence            35778899999999  999999999999999996322  11  2334445899999999999999999999999999999


Q ss_pred             cCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCC--
Q psy7108         120 VESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNK--  197 (703)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~--  197 (703)
                      +.+++ .+-++.-                    +.+|..+.++||+...+....|+.|.+....+.....++.+....  
T Consensus       280 ~~T~~-kqfLPRL--------------------gs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~  338 (792)
T KOG1963|consen  280 LETGK-KQFLPRL--------------------GSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTISGIKPPTP  338 (792)
T ss_pred             ecCCC-ccccccc--------------------CCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhccCccCCCc
Confidence            99887 2222222                    338999999999999999999999999988766555554432221  


Q ss_pred             -ccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeec-----------CCccceEEEEEcCCCCE
Q psy7108         198 -SLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL-----------KPEVRVFCVKFSPTGQA  265 (703)
Q Consensus       198 -~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~-----------~h~~~V~~l~~spdg~~  265 (703)
                       ......+..+.++++|.-+.++..+..      ..|.+||+.+.+.+..+.           .+...+++++.+-.|.+
T Consensus       339 ~~k~~~~~l~t~~~idpr~~~~vln~~~------g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav~~~~~gs~  412 (792)
T KOG1963|consen  339 STKTRPQSLTTGVSIDPRTNSLVLNGHP------GHVQFYDLYTDSTIYKLQVCDENYSDGDVNIQVGITAVARSRFGSW  412 (792)
T ss_pred             cccccccccceeEEEcCCCCceeecCCC------ceEEEEeccccceeeeEEEEeecccCCcceeEEeeeeehhhccceE
Confidence             111223456778889966666665544      389999988776554433           12344788888888999


Q ss_pred             EEEEe--------CCC---EEEEEcCCCcee-----------cceeeeEEEccchhhhHhhcCCcceEEEEEEecC
Q psy7108         266 WVAAT--------TEG---VHIYSLDSGYVF-----------DPFLLDISITPQSVKEALADKDYAKALMMSLKLN  319 (703)
Q Consensus       266 l~s~s--------~Dg---v~iwd~~~~~~~-----------~~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~  319 (703)
                      ++|.-        .||   +++|.......-           ........+.+........+.+.++.+++ |.+.
T Consensus       413 maT~E~~~d~~~~~~~e~~LKFW~~n~~~kt~~L~T~I~~PH~~~~vat~~~~~~rs~~~vta~~dg~~Ki-W~~~  487 (792)
T KOG1963|consen  413 MATLEARIDKFNFFDGEVSLKFWQYNPNSKTFILNTKINNPHGNAFVATIFLNPTRSVRCVTASVDGDFKI-WVFT  487 (792)
T ss_pred             EEEeeeeehhhhccCceEEEEEEEEcCCcceeEEEEEEecCCCceeEEEEEecCcccceeEEeccCCeEEE-EEEe
Confidence            98864        355   788986544321           11111223333222224556667777887 7774

>KOG1517|consensus

Probab=99.22  E-value=3.5e-10  Score=125.56  Aligned_cols=202  Identities=14%  Similarity=0.202  Sum_probs=139.3

Q ss_pred             EEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEec-CCCcEEEEEEec-CCCEEEEEECCCeEEEEEcCCCcE---
Q psy7108          51 SCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQ-LLSDALCVAYKP-DGTEIVVATLDGQLIMFDVESAAQ---  125 (703)
Q Consensus        51 ~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~-~~~~V~~v~~sp-dg~~las~s~dg~I~vwd~~~~~~---  125 (703)
                      .-++|..  ...+|+++|.-..|||||.+....+..+.. ....|+++.-+. .|+.+++|..||.|++||.+....   
T Consensus      1169 ~v~dWqQ--~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~ 1246 (1387)
T KOG1517|consen 1169 LVVDWQQ--QSGHLLVTGDVRSIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSL 1246 (1387)
T ss_pred             eeeehhh--hCCeEEecCCeeEEEEEecccceeEeecccCCCccceeecccccCCceEEEeecCCceEEeecccCCcccc
Confidence            4567887  445555555578999999977655544432 445566665433 468999999999999999986543   


Q ss_pred             EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCC-EEEEEecCCcEEEEECCCCceEEEEEeccCCccccccc
Q psy7108         126 VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGS-CILAAGQSKYICIYSSREGILLKKFTITQNKSLDGIND  204 (703)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~-~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~  204 (703)
                      +...+.|.+                  ..+|..+.+.+.|- .|++|+.||.|++||++.......+........   .+
T Consensus      1247 v~~~R~h~~------------------~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~y---Gs 1305 (1387)
T KOG1517|consen 1247 VCVYREHND------------------VEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEY---GS 1305 (1387)
T ss_pred             ceeecccCC------------------cccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeecccc---Cc
Confidence            445555544                  11388899988664 499999999999999997522222221111000   12


Q ss_pred             cceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeec-------CCccceEEEEEcCCCCEEEEEeCCC-EEE
Q psy7108         205 FINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL-------KPEVRVFCVKFSPTGQAWVAATTEG-VHI  276 (703)
Q Consensus       205 ~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~-------~h~~~V~~l~~spdg~~l~s~s~Dg-v~i  276 (703)
                      .++++..+++...++.++..       .++||++...+ +..+.       ...+.+.+++|+|-.-.+|+|+.|. |.|
T Consensus      1306 ~lTal~VH~hapiiAsGs~q-------~ikIy~~~G~~-l~~~k~n~~F~~q~~gs~scL~FHP~~~llAaG~~Ds~V~i 1377 (1387)
T KOG1517|consen 1306 ALTALTVHEHAPIIASGSAQ-------LIKIYSLSGEQ-LNIIKYNPGFMGQRIGSVSCLAFHPHRLLLAAGSADSTVSI 1377 (1387)
T ss_pred             cceeeeeccCCCeeeecCcc-------eEEEEecChhh-hcccccCcccccCcCCCcceeeecchhHhhhhccCCceEEE
Confidence            47889999999988877652       79999976433 22222       1245689999999988899999999 999


Q ss_pred             EEcCCCc
Q psy7108         277 YSLDSGY  283 (703)
Q Consensus       277 wd~~~~~  283 (703)
                      |.....+
T Consensus      1378 Ys~~k~~ 1384 (1387)
T KOG1517|consen 1378 YSCEKPR 1384 (1387)
T ss_pred             eecCCcC
Confidence            9876543

>KOG1587|consensus

Probab=99.21  E-value=6.4e-10  Score=121.85  Aligned_cols=213  Identities=14%  Similarity=0.119  Sum_probs=148.0

Q ss_pred             cccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEE-----Ee-------cCCCcEEEEEEecCC-CEEEE
Q psy7108          42 VLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHE-----TI-------QLLSDALCVAYKPDG-TEIVV  108 (703)
Q Consensus        42 ~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~-----~~-------~~~~~V~~v~~spdg-~~las  108 (703)
                      ....|..+|+.+.|.....+.-++++|.||.|..|+++.-.....     ..       .....+++++|.+.. ..+++
T Consensus       286 ~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiV  365 (555)
T KOG1587|consen  286 LEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIV  365 (555)
T ss_pred             ccccCCcCeEEEEEeccCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEE
Confidence            345799999999998732345599999999999998864332111     11       123468899998854 57889


Q ss_pred             EECCCeEEEEEcCCCcEE--EEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECC-CC
Q psy7108         109 ATLDGQLIMFDVESAAQV--GSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSR-EG  185 (703)
Q Consensus       109 ~s~dg~I~vwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~-~~  185 (703)
                      |+.+|.|.--+-...+..  ..++++.              ....|.++|.++.++|-+..++..+.|.+++||... ..
T Consensus       366 GTe~G~v~~~~r~g~~~~~~~~~~~~~--------------~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~  431 (555)
T KOG1587|consen  366 GTEEGKVYKGCRKGYTPAPEVSYKGHS--------------TFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIA  431 (555)
T ss_pred             EcCCcEEEEEeccCCcccccccccccc--------------cccccCcceEeeecCCCccceeeeeccceeEeccccCCC
Confidence            999999877443322211  1222221              123456799999999987666655559999999977 44


Q ss_pred             ceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC--ccceeecCCccceEEEEEcCCC
Q psy7108         186 ILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG--DMAARVLKPEVRVFCVKFSPTG  263 (703)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~--~~~~~~~~h~~~V~~l~~spdg  263 (703)
                      .++..+..        ....+++++|||....+++....+     +.+.+||+...  .++.....+....+.+.|+++|
T Consensus       432 ~Pl~~~~~--------~~~~v~~vaWSptrpavF~~~d~~-----G~l~iWDLl~~~~~Pv~s~~~~~~~l~~~~~s~~g  498 (555)
T KOG1587|consen  432 SPLLSLDS--------SPDYVTDVAWSPTRPAVFATVDGD-----GNLDIWDLLQDDEEPVLSQKVCSPALTRVRWSPNG  498 (555)
T ss_pred             Ccchhhhh--------ccceeeeeEEcCcCceEEEEEcCC-----CceehhhhhccccCCcccccccccccceeecCCCC
Confidence            44444432        233689999999998777766542     47999998754  3343443345567788899999


Q ss_pred             CEEEEEeCCC-EEEEEcCC
Q psy7108         264 QAWVAATTEG-VHIYSLDS  281 (703)
Q Consensus       264 ~~l~s~s~Dg-v~iwd~~~  281 (703)
                      +.+++|...| +++|++..
T Consensus       499 ~~lavGd~~G~~~~~~l~~  517 (555)
T KOG1587|consen  499 KLLAVGDANGTTHILKLSE  517 (555)
T ss_pred             cEEEEecCCCcEEEEEcCc
Confidence            9999999999 99999864

>KOG2394|consensus

Probab=99.18  E-value=6e-11  Score=122.93  Aligned_cols=96  Identities=22%  Similarity=0.372  Sum_probs=85.4

Q ss_pred             CCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcE
Q psy7108          46 HEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQ  125 (703)
Q Consensus        46 H~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~  125 (703)
                      -.+.|+..+|+|  ||++||+.|.||.+||+|..+.+........-+...|++|||||++|++|+.|.-|.||.+..++.
T Consensus       289 ~~g~in~f~FS~--DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRV  366 (636)
T KOG2394|consen  289 GEGSINEFAFSP--DGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRV  366 (636)
T ss_pred             ccccccceeEcC--CCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEEeccceE
Confidence            356899999999  999999999999999999987754444445667899999999999999999999999999999999


Q ss_pred             EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC
Q psy7108         126 VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA  163 (703)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp  163 (703)
                      +..-.+|+.                    .|+.++|.|
T Consensus       367 VARGqGHkS--------------------WVs~VaFDp  384 (636)
T KOG2394|consen  367 VARGQGHKS--------------------WVSVVAFDP  384 (636)
T ss_pred             EEecccccc--------------------ceeeEeecc
Confidence            988888876                    899999997

>KOG1334|consensus

Probab=99.18  E-value=5.5e-10  Score=114.71  Aligned_cols=254  Identities=17%  Similarity=0.165  Sum_probs=178.4

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCce---eEEEecCCCcEEEEEEecCC-CEEEEEECCCeEE
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDT---QHETIQLLSDALCVAYKPDG-TEIVVATLDGQLI  116 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~---~~~~~~~~~~V~~v~~spdg-~~las~s~dg~I~  116 (703)
                      +...||...|....|-|..+...+++++.||.|++=.+...+.   ...+..|.++|.-++.-|+. ..|.+++.|+.+.
T Consensus       179 ~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~  258 (559)
T KOG1334|consen  179 SFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSEILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVF  258 (559)
T ss_pred             ccccccccchhhhhccCCCCCcCceeccccCceeeeeeccccceecceecccccCccceeeecCCCCCccccccccccee
Confidence            6668999999999999975667899999999999877654332   34556699999999999987 4688999999999


Q ss_pred             EEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCC-EEEEEecCCcEEEEECCCCce------EE
Q psy7108         117 MFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGS-CILAAGQSKYICIYSSREGIL------LK  189 (703)
Q Consensus       117 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~-~l~s~s~dg~I~lwD~~~~~~------~~  189 (703)
                      -.|++++.....+.....-.              ...-...+++.+|-.. .+++++.|..+++||.+.-..      +.
T Consensus       259 ~~Dlr~~~pa~~~~cr~~~~--------------~~~v~L~~Ia~~P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~  324 (559)
T KOG1334|consen  259 HIDLRQDVPAEKFVCREADE--------------KERVGLYTIAVDPRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLD  324 (559)
T ss_pred             eeeeccCCccceeeeeccCC--------------ccceeeeeEecCCCCccccccCChhhhhhhhcccchhhccccchhh
Confidence            99999887665555332100              0011567889999654 789999999999999875321      23


Q ss_pred             EEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC--CC----------cccee-ecCCcc--ce
Q psy7108         190 KFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK--KG----------DMAAR-VLKPEV--RV  254 (703)
Q Consensus       190 ~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~--~~----------~~~~~-~~~h~~--~V  254 (703)
                      +|..+.-.  ......|++++++.++.-++++-.+.      .|+++...  .|          ..... +.+|..  .|
T Consensus       325 ~f~p~hl~--~d~~v~ITgl~Ysh~~sElLaSYnDe------~IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TV  396 (559)
T KOG1334|consen  325 KFCPHHLV--EDDPVNITGLVYSHDGSELLASYNDE------DIYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRNSRTV  396 (559)
T ss_pred             hcCCcccc--ccCcccceeEEecCCccceeeeeccc------ceEEeccccccCCCCCCCcchhhccchhhccccccccc
Confidence            33222211  12234689999998877666655542      47777432  22          11222 556643  37


Q ss_pred             EEEEE-cCCCCEEEEEeCCC-EEEEEcCCCceeccee------eeEEEccchhhhHhhcCCcceEEEEEEecC
Q psy7108         255 FCVKF-SPTGQAWVAATTEG-VHIYSLDSGYVFDPFL------LDISITPQSVKEALADKDYAKALMMSLKLN  319 (703)
Q Consensus       255 ~~l~~-spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~~------~~~~~spd~~~~~l~sg~~~~~l~la~~l~  319 (703)
                      .++-| -|...++++|+.-| |.||+..+++.+.-..      .++.=+|  ...+|++.+.+.-|++ |...
T Consensus       397 KgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~MegDr~VVNCLEpHP--~~PvLAsSGid~DVKI-WTP~  466 (559)
T KOG1334|consen  397 KGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGDRHVVNCLEPHP--HLPVLASSGIDHDVKI-WTPL  466 (559)
T ss_pred             ceeeeccCccceEEecCccceEEEEecchhHHHHHhhcccceEeccCCCC--CCchhhccCCccceee-ecCC
Confidence            77754 68889999999999 9999999988765443      3333344  4489999999999998 8763

>KOG4547|consensus

Probab=99.18  E-value=1.8e-09  Score=113.99  Aligned_cols=188  Identities=13%  Similarity=0.296  Sum_probs=150.6

Q ss_pred             CCCEEEEEeCCCcEEEEEcCCCceeEEEec---CCCcEEEEEEe------c--------------CCCEEEEEECCCeEE
Q psy7108          60 SSTGMVSASWDKTVKLWNAVETDTQHETIQ---LLSDALCVAYK------P--------------DGTEIVVATLDGQLI  116 (703)
Q Consensus        60 dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~---~~~~V~~v~~s------p--------------dg~~las~s~dg~I~  116 (703)
                      ...++|....||.+|+|+...++....+..   ..+...+..|.      |              |...++-|...|.|.
T Consensus         4 ~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v~   83 (541)
T KOG4547|consen    4 ALDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSVL   83 (541)
T ss_pred             hhheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccEE
Confidence            578999999999999999988754444332   34445555552      2              334677788899999


Q ss_pred             EEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccC
Q psy7108         117 MFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQN  196 (703)
Q Consensus       117 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~  196 (703)
                      +|++..++....+....                  |.+.|.++.++.+-..|.+++.|+.+..|+....+.++.+.....
T Consensus        84 ~ys~~~g~it~~~st~~------------------h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~  145 (541)
T KOG4547|consen   84 LYSVAGGEITAKLSTDK------------------HYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKP  145 (541)
T ss_pred             EEEecCCeEEEEEecCC------------------CCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCC
Confidence            99999999887776432                  355899999999999999999999999999999998888875544


Q ss_pred             CccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCC-----CCEEEEEeC
Q psy7108         197 KSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPT-----GQAWVAATT  271 (703)
Q Consensus       197 ~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spd-----g~~l~s~s~  271 (703)
                              .+.+++.+|||+.+++++.        .|++||+++++.+..+.+|.++|.+++|--+     |.++.++..
T Consensus       146 --------~~~sl~is~D~~~l~~as~--------~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~  209 (541)
T KOG4547|consen  146 --------LVSSLCISPDGKILLTASR--------QIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAA  209 (541)
T ss_pred             --------ccceEEEcCCCCEEEeccc--------eEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeeccc
Confidence                    7789999999999888774        7999999999999999999999999999776     677755443


Q ss_pred             -CC-EEEEEcCC
Q psy7108         272 -EG-VHIYSLDS  281 (703)
Q Consensus       272 -Dg-v~iwd~~~  281 (703)
                       +. +.+|-++.
T Consensus       210 ~~r~i~~w~v~~  221 (541)
T KOG4547|consen  210 AERGITVWVVEK  221 (541)
T ss_pred             cccceeEEEEEc
Confidence             33 88888765

>KOG2111|consensus

Probab=99.15  E-value=4.2e-09  Score=103.17  Aligned_cols=178  Identities=15%  Similarity=0.314  Sum_probs=131.5

Q ss_pred             CcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcC-CCcEEEEEeccccCCCCCCCCccchhhc
Q psy7108          71 KTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVE-SAAQVGSVEARRDLDSGRLDTDLVTREQ  149 (703)
Q Consensus        71 g~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (703)
                      ..|.||| +..+.....+....+|.++.++++  .|++. ..+.|+||... +.+.++.++....               
T Consensus        75 NkviIWD-D~k~~~i~el~f~~~I~~V~l~r~--riVvv-l~~~I~VytF~~n~k~l~~~et~~N---------------  135 (346)
T KOG2111|consen   75 NKVIIWD-DLKERCIIELSFNSEIKAVKLRRD--RIVVV-LENKIYVYTFPDNPKLLHVIETRSN---------------  135 (346)
T ss_pred             ceEEEEe-cccCcEEEEEEeccceeeEEEcCC--eEEEE-ecCeEEEEEcCCChhheeeeecccC---------------
Confidence            4689999 444455666778899999999965  45555 47899999987 5666776665432               


Q ss_pred             ccCCccEEEEEEcCCCCEEEE-EecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCC
Q psy7108         150 SLKAKAVSTVCYSADGSCILA-AGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEG  228 (703)
Q Consensus       150 ~~~~~~V~~i~~spdg~~l~s-~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~  228 (703)
                         .....+++-+.+...|+. |-.-|.|.|-|+...+.-      ....+.+|.+.|.+++.+-+|..+++++..|   
T Consensus       136 ---PkGlC~~~~~~~k~~LafPg~k~GqvQi~dL~~~~~~------~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkG---  203 (346)
T KOG2111|consen  136 ---PKGLCSLCPTSNKSLLAFPGFKTGQVQIVDLASTKPN------APSIINAHDSDIACVALNLQGTLVATASTKG---  203 (346)
T ss_pred             ---CCceEeecCCCCceEEEcCCCccceEEEEEhhhcCcC------CceEEEcccCceeEEEEcCCccEEEEeccCc---
Confidence               113434433333344443 345689999999865442      1122345666999999999999999998876   


Q ss_pred             CeeEEECCCCCCCccceeecC--CccceEEEEEcCCCCEEEEEeCCC-EEEEEcCC
Q psy7108         229 GNVVLKLPGVKKGDMAARVLK--PEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDS  281 (703)
Q Consensus       229 ~~~~i~iwd~~~~~~~~~~~~--h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~  281 (703)
                        -.|+|||..+|+.++.+..  ....|.+++|||++.+||++|+.| ++||.+..
T Consensus       204 --TLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~  257 (346)
T KOG2111|consen  204 --TLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLAVSSDKGTLHIFSLRD  257 (346)
T ss_pred             --EEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEEEEEcCCCeEEEEEeec
Confidence              5799999999998888765  356799999999999999999999 99998765

>KOG2111|consensus

Probab=99.15  E-value=9.5e-09  Score=100.71  Aligned_cols=229  Identities=14%  Similarity=0.172  Sum_probs=154.0

Q ss_pred             eEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEE-EECC------CeEEEEEcCC
Q psy7108          50 VSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVV-ATLD------GQLIMFDVES  122 (703)
Q Consensus        50 V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las-~s~d------g~I~vwd~~~  122 (703)
                      ..+++|+.  |..-++.|..+| .|||+++--++......+.+.+.-+..--..+++|- |+.+      ..|.|||=..
T Consensus         8 ~lsvs~NQ--D~ScFava~~~G-friyn~~P~ke~~~r~~~~~G~~~veMLfR~N~laLVGGg~~pky~pNkviIWDD~k   84 (346)
T KOG2111|consen    8 TLSVSFNQ--DHSCFAVATDTG-FRIYNCDPFKESASRQFIDGGFKIVEMLFRSNYLALVGGGSRPKYPPNKVIIWDDLK   84 (346)
T ss_pred             eeEEEEcc--CCceEEEEecCc-eEEEecCchhhhhhhccccCchhhhhHhhhhceEEEecCCCCCCCCCceEEEEeccc
Confidence            34489999  888888887765 799998653322222122222222222122345543 3333      4699999656


Q ss_pred             CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECC-CCceEEEEEeccCCcccc
Q psy7108         123 AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSR-EGILLKKFTITQNKSLDG  201 (703)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~-~~~~~~~~~~~~~~~~~~  201 (703)
                      ..++.++.-..                     +|.++.+.++  .|++.- .+.|++|... +-+.++.+....+  +.|
T Consensus        85 ~~~i~el~f~~---------------------~I~~V~l~r~--riVvvl-~~~I~VytF~~n~k~l~~~et~~N--PkG  138 (346)
T KOG2111|consen   85 ERCIIELSFNS---------------------EIKAVKLRRD--RIVVVL-ENKIYVYTFPDNPKLLHVIETRSN--PKG  138 (346)
T ss_pred             CcEEEEEEecc---------------------ceeeEEEcCC--eEEEEe-cCeEEEEEcCCChhheeeeecccC--CCc
Confidence            66666666543                     7999999875  355443 4789999988 4455666554332  222


Q ss_pred             ccccceeeeeccCCC--EEEEEcccCCCCCeeEEECCCCCCCcc--ceeecCCccceEEEEEcCCCCEEEEEeCCC--EE
Q psy7108         202 INDFINRRKMTEFGN--VSLIETRETHEGGNVVLKLPGVKKGDM--AARVLKPEVRVFCVKFSPTGQAWVAATTEG--VH  275 (703)
Q Consensus       202 ~~~~v~~~~~spdg~--~l~~~~~~~~~~~~~~i~iwd~~~~~~--~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg--v~  275 (703)
                            -++.+|...  .++..+..     .+.|++-|+...+.  ...+..|+..|.+++.+-+|..+||+|..|  |+
T Consensus       139 ------lC~~~~~~~k~~LafPg~k-----~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIR  207 (346)
T KOG2111|consen  139 ------LCSLCPTSNKSLLAFPGFK-----TGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIR  207 (346)
T ss_pred             ------eEeecCCCCceEEEcCCCc-----cceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEE
Confidence                  233444333  33332221     13788887765544  467789999999999999999999999999  89


Q ss_pred             EEEcCCCceeccee--------eeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108         276 IYSLDSGYVFDPFL--------LDISITPQSVKEALADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       276 iwd~~~~~~~~~~~--------~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~  321 (703)
                      |||..+|+.+.++.        .+++|||+.  .+|+..+..+++.+ +.+...
T Consensus       208 IFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~--s~LavsSdKgTlHi-F~l~~~  258 (346)
T KOG2111|consen  208 IFDTEDGTLLQELRRGVDRADIYCIAFSPNS--SWLAVSSDKGTLHI-FSLRDT  258 (346)
T ss_pred             EEEcCCCcEeeeeecCCchheEEEEEeCCCc--cEEEEEcCCCeEEE-EEeecC
Confidence            99999999988775        579999999  88999999999998 777643

>KOG2321|consensus

Probab=99.14  E-value=1.3e-09  Score=113.93  Aligned_cols=199  Identities=17%  Similarity=0.164  Sum_probs=146.1

Q ss_pred             CCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCC
Q psy7108          60 SSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGR  139 (703)
Q Consensus        60 dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~  139 (703)
                      +.++++.|+ ...|.-.+++.|.-+..+....+.++++..++-..+|++|+.+|.|-.||.++...+.++.....+....
T Consensus       145 scDly~~gs-g~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~p  223 (703)
T KOG2321|consen  145 SCDLYLVGS-GSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHP  223 (703)
T ss_pred             CccEEEeec-CcceEEEEccccccccccccccccceeeeecCccceEEecccCceEEEecchhhhhheeeecccccCCCc
Confidence            334444444 3467777888886555555566899999999999999999999999999999998888887655432221


Q ss_pred             CCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCE-E
Q psy7108         140 LDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNV-S  218 (703)
Q Consensus       140 ~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~-l  218 (703)
                      ...         ....|+++.|+.||-.+++|+.+|.+.|||+++.+++..-. |.      ...+|..+.|.+.+.. .
T Consensus       224 g~~---------~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kd-h~------~e~pi~~l~~~~~~~q~~  287 (703)
T KOG2321|consen  224 GGD---------AAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKD-HG------YELPIKKLDWQDTDQQNK  287 (703)
T ss_pred             ccc---------ccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecc-cC------CccceeeecccccCCCce
Confidence            111         11259999999999999999999999999999988765533 21      2346777888665332 2


Q ss_pred             EEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCC
Q psy7108         219 LIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSG  282 (703)
Q Consensus       219 ~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~  282 (703)
                      +++...      ..++|||-.+|+....+. +...+..+++-|++.+++++-+++ +..|-++.-
T Consensus       288 v~S~Dk------~~~kiWd~~~Gk~~asiE-pt~~lND~C~~p~sGm~f~Ane~~~m~~yyiP~L  345 (703)
T KOG2321|consen  288 VVSMDK------RILKIWDECTGKPMASIE-PTSDLNDFCFVPGSGMFFTANESSKMHTYYIPSL  345 (703)
T ss_pred             EEecch------HHhhhcccccCCceeecc-ccCCcCceeeecCCceEEEecCCCcceeEEcccc
Confidence            333322      489999999998776554 344599999999999999999888 776666543

>KOG4497|consensus

Probab=99.14  E-value=6.6e-10  Score=108.78  Aligned_cols=187  Identities=16%  Similarity=0.203  Sum_probs=127.3

Q ss_pred             CcCeEEEEEcCCCCCCEEEE-EeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEE-EEEECCCeEEEEEcCCCc
Q psy7108          47 EGPVSCIEFSPVLSSTGMVS-ASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEI-VVATLDGQLIMFDVESAA  124 (703)
Q Consensus        47 ~~~V~~l~~sp~~dg~~L~s-gs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~l-as~s~dg~I~vwd~~~~~  124 (703)
                      -+.|.-+.|..  |..+++. ...|+.|.+|++...+-...+.....++.+++|||||+.| .+..-|-.|.||.+.+.+
T Consensus        48 ldki~yieW~a--ds~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~  125 (447)
T KOG4497|consen   48 LDKIVYIEWKA--DSCHILCVAYKDPKVQVWSLVQPEWYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQK  125 (447)
T ss_pred             HHHhhheeeec--cceeeeeeeeccceEEEEEeecceeEEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccce
Confidence            56788899998  7665554 5788999999998776666677788899999999999655 555668899999998876


Q ss_pred             EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCc---EEEEECCCCceEEEEEeccCCcccc
Q psy7108         125 QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKY---ICIYSSREGILLKKFTITQNKSLDG  201 (703)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~---I~lwD~~~~~~~~~~~~~~~~~~~~  201 (703)
                      ....- ..+.                    .+..++|+|||++.+.+++-..   +.+........++.+.....     
T Consensus       126 ~~~~~-~pK~--------------------~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~~W~ll~~f~~dT~-----  179 (447)
T KOG4497|consen  126 GYLLP-HPKT--------------------NVKGYAFHPDGQFCAILSRRDCKDYVQISSCKAWILLKEFKLDTI-----  179 (447)
T ss_pred             eEEec-cccc--------------------CceeEEECCCCceeeeeecccHHHHHHHHhhHHHHHHHhcCCCcc-----
Confidence            54322 2111                    5688999999999988775422   22222222333444443332     


Q ss_pred             ccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcC
Q psy7108         202 INDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLD  280 (703)
Q Consensus       202 ~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~  280 (703)
                         ..+.+.|+|||..+++=..--    +..|..|.            -.-.+..++|+|.+++|+.|+.|+ ++|-+--
T Consensus       180 ---DltgieWsPdg~~laVwd~~L----eykv~aYe------------~~lG~k~v~wsP~~qflavGsyD~~lrvlnh~  240 (447)
T KOG4497|consen  180 ---DLTGIEWSPDGNWLAVWDNVL----EYKVYAYE------------RGLGLKFVEWSPCNQFLAVGSYDQMLRVLNHF  240 (447)
T ss_pred             ---cccCceECCCCcEEEEecchh----hheeeeee------------eccceeEEEeccccceEEeeccchhhhhhcee
Confidence               557789999998765522110    01111111            123477899999999999999999 7765543

>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function

Probab=99.12  E-value=2.6e-12  Score=97.81  Aligned_cols=59  Identities=22%  Similarity=0.253  Sum_probs=39.3

Q ss_pred             ccceeeeecccchhhhhhhhcCCcccccccccccCCCCCCcCCCcccceeecccCcCCCCCCccccccCchhhhhcccCC
Q psy7108         451 NKFYRFSCDFNVYTLELISRLGPLRIKPKVEKMETGSSDEESSKDDETEIRVLDEDVPRSSDTGDIQLKSTRMNELGLYD  530 (703)
Q Consensus       451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d  530 (703)
                      .+.|+|++|.|.++|+|||+|+++||+++..                              .......|||||++||+++
T Consensus         5 i~~~GY~~E~h~V~T~DGYiL~l~RIp~~~~------------------------------~~~~~~~k~pVll~HGL~~   54 (63)
T PF04083_consen    5 IEKHGYPCEEHEVTTEDGYILTLHRIPPGKN------------------------------SSNQNKKKPPVLLQHGLLQ   54 (63)
T ss_dssp             HHHTT---EEEEEE-TTSEEEEEEEE-SBTT------------------------------CTTTTTT--EEEEE--TT-
T ss_pred             HHHcCCCcEEEEEEeCCCcEEEEEEccCCCC------------------------------CcccCCCCCcEEEECCccc
Confidence            5679999999999999999999999998774                              1223457899999999999


Q ss_pred             chhhHHHhHcc
Q psy7108         531 TTATIDYILNQ  541 (703)
Q Consensus       531 ~~~~~~~i~~~  541 (703)
                      +++  +|++|.
T Consensus        55 ss~--~wv~ng   63 (63)
T PF04083_consen   55 SSD--DWVLNG   63 (63)
T ss_dssp             -GG--GGCSS-
T ss_pred             ChH--HHHcCC
Confidence            999  999873

The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.12  E-value=8.6e-09  Score=113.48  Aligned_cols=193  Identities=15%  Similarity=0.144  Sum_probs=127.7

Q ss_pred             cEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECC---CeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhh
Q psy7108          72 TVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLD---GQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTRE  148 (703)
Q Consensus        72 ~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~d---g~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (703)
                      .|.++|.+.. ....+..+...+...+|+|||+.|+..+.+   ..|.+||+.+++..... ...               
T Consensus       180 ~l~~~d~~g~-~~~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~l~-~~~---------------  242 (430)
T PRK00178        180 TLQRSDYDGA-RAVTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQIT-NFE---------------  242 (430)
T ss_pred             EEEEECCCCC-CceEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEEcc-CCC---------------
Confidence            3666676544 455666777889999999999999887654   36999999888654322 111               


Q ss_pred             cccCCccEEEEEEcCCCCEEEE-EecCC--cEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccC
Q psy7108         149 QSLKAKAVSTVCYSADGSCILA-AGQSK--YICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRET  225 (703)
Q Consensus       149 ~~~~~~~V~~i~~spdg~~l~s-~s~dg--~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~  225 (703)
                           +.+...+|+|||+.|+. .+.++  .|++||+.++.... +....        .......|+|||+.+++.+.. 
T Consensus       243 -----g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~~~-lt~~~--------~~~~~~~~spDg~~i~f~s~~-  307 (430)
T PRK00178        243 -----GLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQLSR-VTNHP--------AIDTEPFWGKDGRTLYFTSDR-  307 (430)
T ss_pred             -----CCcCCeEECCCCCEEEEEEccCCCceEEEEECCCCCeEE-cccCC--------CCcCCeEECCCCCEEEEEECC-
Confidence                 13456899999998874 44444  58899999876533 22111        134567899999988876543 


Q ss_pred             CCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeC-CC---EEEEEcCCCceecc----eeeeEEEccc
Q psy7108         226 HEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATT-EG---VHIYSLDSGYVFDP----FLLDISITPQ  297 (703)
Q Consensus       226 ~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~-Dg---v~iwd~~~~~~~~~----~~~~~~~spd  297 (703)
                        .+...|.++|+.+++...... .........|+|||+.++..+. ++   |.++|+.+++....    ......|+|+
T Consensus       308 --~g~~~iy~~d~~~g~~~~lt~-~~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~~lt~~~~~~~p~~spd  384 (430)
T PRK00178        308 --GGKPQIYKVNVNGGRAERVTF-VGNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSVRILTDTSLDESPSVAPN  384 (430)
T ss_pred             --CCCceEEEEECCCCCEEEeec-CCCCccceEECCCCCEEEEEEccCCceEEEEEECCCCCEEEccCCCCCCCceECCC
Confidence              223468888888776433222 1223345789999999976654 33   77889887754211    1234688999


Q ss_pred             hh
Q psy7108         298 SV  299 (703)
Q Consensus       298 ~~  299 (703)
                      +.
T Consensus       385 g~  386 (430)
T PRK00178        385 GT  386 (430)
T ss_pred             CC
Confidence            83

>KOG1354|consensus

Probab=99.11  E-value=2.8e-09  Score=105.10  Aligned_cols=263  Identities=11%  Similarity=0.165  Sum_probs=168.3

Q ss_pred             CCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCce----eE-EEecC------------CCcEEEEEEecCCC--EE
Q psy7108          46 HEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDT----QH-ETIQL------------LSDALCVAYKPDGT--EI  106 (703)
Q Consensus        46 H~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~----~~-~~~~~------------~~~V~~v~~spdg~--~l  106 (703)
                      -.+-|.++.|..  .|.+||||..+|.|.++.-+....    .. ....|            ...|..+.|.+++.  .+
T Consensus        24 eadiis~vef~~--~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~F  101 (433)
T KOG1354|consen   24 EADIISAVEFDH--YGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEF  101 (433)
T ss_pred             hhcceeeEEeec--ccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEE
Confidence            356789999999  999999999999999986543221    11 22223            24688999998774  56


Q ss_pred             EEEECCCeEEEEEcCCCcEEE-EEeccccCCCC-----------C----CCCccchhhcccCCccEEEEEEcCCCCEEEE
Q psy7108         107 VVATLDGQLIMFDVESAAQVG-SVEARRDLDSG-----------R----LDTDLVTREQSLKAKAVSTVCYSADGSCILA  170 (703)
Q Consensus       107 as~s~dg~I~vwd~~~~~~~~-~~~~~~~~~~~-----------~----~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s  170 (703)
                      ...+.|++|++|.+....... ..........+           +    ........-..+|.-.|.++.++.|+..+++
T Consensus       102 LlstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lS  181 (433)
T KOG1354|consen  102 LLSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLS  181 (433)
T ss_pred             EEecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEee
Confidence            777889999999986543211 00000000000           0    0000111123467778999999999998887


Q ss_pred             EecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCC-EEEEEcccCCCCCeeEEECCCCCCCccce----
Q psy7108         171 AGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGN-VSLIETRETHEGGNVVLKLPGVKKGDMAA----  245 (703)
Q Consensus       171 ~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~-~l~~~~~~~~~~~~~~i~iwd~~~~~~~~----  245 (703)
                      + .|=.|.+|+++--.....+..-...........|++..|+|..- .++.+++.|      +|++-|++...+..    
T Consensus       182 A-DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKG------tIrLcDmR~~aLCd~hsK  254 (433)
T KOG1354|consen  182 A-DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKG------TIRLCDMRQSALCDAHSK  254 (433)
T ss_pred             c-cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCC------cEEEeechhhhhhcchhh
Confidence            6 46789999987533222222112222333445788899999764 455566554      89999988542211    


Q ss_pred             eecC------------CccceEEEEEcCCCCEEEEEeCCCEEEEEcCC-Cceeccee---------------------ee
Q psy7108         246 RVLK------------PEVRVFCVKFSPTGQAWVAATTEGVHIYSLDS-GYVFDPFL---------------------LD  291 (703)
Q Consensus       246 ~~~~------------h~~~V~~l~~spdg~~l~s~s~Dgv~iwd~~~-~~~~~~~~---------------------~~  291 (703)
                      .+..            --..|..+.|+++|+++++-..-.|++||+.- .+....+.                     ..
T Consensus       255 lfEepedp~~rsffseiIsSISDvKFs~sGryilsRDyltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFe  334 (433)
T KOG1354|consen  255 LFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDYLTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFE  334 (433)
T ss_pred             hhccccCCcchhhHHHHhhhhhceEEccCCcEEEEeccceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeE
Confidence            1111            12458889999999999988777799999843 23322221                     45


Q ss_pred             EEEccchhhhHhhcCCcceEEEEEEecCc
Q psy7108         292 ISITPQSVKEALADKDYAKALMMSLKLNE  320 (703)
Q Consensus       292 ~~~spd~~~~~l~sg~~~~~l~la~~l~~  320 (703)
                      ++|+.++  ..+.+|++...+++ +.+..
T Consensus       335 c~~sg~~--~~v~TGsy~n~frv-f~~~~  360 (433)
T KOG1354|consen  335 CSWSGND--SYVMTGSYNNVFRV-FNLAR  360 (433)
T ss_pred             EEEcCCc--ceEecccccceEEE-ecCCC
Confidence            7888887  78899999999888 66443

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.11  E-value=1.9e-08  Score=107.15  Aligned_cols=199  Identities=13%  Similarity=0.146  Sum_probs=130.5

Q ss_pred             CCEE-EEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCC
Q psy7108          61 STGM-VSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGR  139 (703)
Q Consensus        61 g~~L-~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~  139 (703)
                      ++++ ++-..++.|.+.|..+.+....+......-..+.|+|||+++++++.||.|.++|+.+++.+.++....      
T Consensus         5 ~~l~~V~~~~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~------   78 (369)
T PF02239_consen    5 GNLFYVVERGSGSVAVIDGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGG------   78 (369)
T ss_dssp             GGEEEEEEGGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SS------
T ss_pred             ccEEEEEecCCCEEEEEECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCC------
Confidence            3455 455678999999998886666655544444557899999999999999999999999999999887654      


Q ss_pred             CCCccchhhcccCCccEEEEEEcCCCCEEEEEe-cCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEE
Q psy7108         140 LDTDLVTREQSLKAKAVSTVCYSADGSCILAAG-QSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVS  218 (703)
Q Consensus       140 ~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s-~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l  218 (703)
                                     ....+++++||+++++++ .++.+.++|.++.+.++++...... .......+..+..+|....+
T Consensus        79 ---------------~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~-~~~~~~Rv~aIv~s~~~~~f  142 (369)
T PF02239_consen   79 ---------------NPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMP-VDGPESRVAAIVASPGRPEF  142 (369)
T ss_dssp             ---------------EEEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE--TTTS---EEEEEE-SSSSEE
T ss_pred             ---------------CcceEEEcCCCCEEEEEecCCCceeEeccccccceeeccccccc-ccccCCCceeEEecCCCCEE
Confidence                           468899999999999875 6789999999999999887643221 11133456677788888866


Q ss_pred             EEEcccCCCCCeeEEECCCCCCCccce-eecCCccceEEEEEcCCCCEEEEEeCCC--EEEEEcCCCceec
Q psy7108         219 LIETRETHEGGNVVLKLPGVKKGDMAA-RVLKPEVRVFCVKFSPTGQAWVAATTEG--VHIYSLDSGYVFD  286 (703)
Q Consensus       219 ~~~~~~~~~~~~~~i~iwd~~~~~~~~-~~~~h~~~V~~l~~spdg~~l~s~s~Dg--v~iwd~~~~~~~~  286 (703)
                      +++..+.     ..|.+-|....+... .............|+|++++++++....  +-++|..+++...
T Consensus       143 Vv~lkd~-----~~I~vVdy~d~~~~~~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v~  208 (369)
T PF02239_consen  143 VVNLKDT-----GEIWVVDYSDPKNLKVTTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLVA  208 (369)
T ss_dssp             EEEETTT-----TEEEEEETTTSSCEEEEEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEEE
T ss_pred             EEEEccC-----CeEEEEEeccccccceeeecccccccccccCcccceeeecccccceeEEEeeccceEEE
Confidence            6655432     145555655443222 2222344567889999999987665433  8899988876643

...

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.10  E-value=1.1e-08  Score=112.11  Aligned_cols=192  Identities=14%  Similarity=0.163  Sum_probs=129.4

Q ss_pred             cEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECC---CeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhh
Q psy7108          72 TVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLD---GQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTRE  148 (703)
Q Consensus        72 ~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~d---g~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (703)
                      .|.++|.... ....+..+...+.+.+|+|||+.|+.++.+   ..|++||+.+++...... ..               
T Consensus       171 ~l~~~d~~g~-~~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~~~-~~---------------  233 (417)
T TIGR02800       171 ELQVADYDGA-NPQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKVAS-FP---------------  233 (417)
T ss_pred             eEEEEcCCCC-CCEEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEeec-CC---------------
Confidence            5777776433 456666777789999999999999987754   479999999886543222 11               


Q ss_pred             cccCCccEEEEEEcCCCCEEEEE-ecCC--cEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccC
Q psy7108         149 QSLKAKAVSTVCYSADGSCILAA-GQSK--YICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRET  225 (703)
Q Consensus       149 ~~~~~~~V~~i~~spdg~~l~s~-s~dg--~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~  225 (703)
                           +.+.+++|+|||+.|+.. +.++  .|++||+.++..... ..+.        .......|+|||+.+++.+..+
T Consensus       234 -----~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~~~~l-~~~~--------~~~~~~~~s~dg~~l~~~s~~~  299 (417)
T TIGR02800       234 -----GMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQLTRL-TNGP--------GIDTEPSWSPDGKSIAFTSDRG  299 (417)
T ss_pred             -----CCccceEECCCCCEEEEEECCCCCccEEEEECCCCCEEEC-CCCC--------CCCCCEEECCCCCEEEEEECCC
Confidence                 145678999999987753 4443  599999987754322 2111        1334678999999888765432


Q ss_pred             CCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC----EEEEEcCCCceecc----eeeeEEEccc
Q psy7108         226 HEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG----VHIYSLDSGYVFDP----FLLDISITPQ  297 (703)
Q Consensus       226 ~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg----v~iwd~~~~~~~~~----~~~~~~~spd  297 (703)
                         +...|.++|+.+++.. .+..+...+....|+|+|++++.++.++    |.+|++.++.....    ......|+|+
T Consensus       300 ---g~~~iy~~d~~~~~~~-~l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~p~~spd  375 (417)
T TIGR02800       300 ---GSPQIYMMDADGGEVR-RLTFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGERVLTDTGLDESPSFAPN  375 (417)
T ss_pred             ---CCceEEEEECCCCCEE-EeecCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCeEEccCCCCCCCceECCC
Confidence               2236888888776543 3444455677889999999998777653    77888877543211    1234578888


Q ss_pred             h
Q psy7108         298 S  298 (703)
Q Consensus       298 ~  298 (703)
                      +
T Consensus       376 g  376 (417)
T TIGR02800       376 G  376 (417)
T ss_pred             C
Confidence            8

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.08  E-value=1.2e-08  Score=112.40  Aligned_cols=193  Identities=11%  Similarity=0.161  Sum_probs=124.9

Q ss_pred             cEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECC---CeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhh
Q psy7108          72 TVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLD---GQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTRE  148 (703)
Q Consensus        72 ~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~d---g~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (703)
                      .+.++|.... ....+......+.+..|+|||+.|+..+.+   ..|++||+.+++....... ..              
T Consensus       199 ~l~i~d~dG~-~~~~l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~lt~~-~g--------------  262 (448)
T PRK04792        199 QLMIADYDGY-NEQMLLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKVTSF-PG--------------  262 (448)
T ss_pred             EEEEEeCCCC-CceEeecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEecCC-CC--------------
Confidence            4566676444 345566778889999999999999877543   2589999988765332111 11              


Q ss_pred             cccCCccEEEEEEcCCCCEEEE-EecCCc--EEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccC
Q psy7108         149 QSLKAKAVSTVCYSADGSCILA-AGQSKY--ICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRET  225 (703)
Q Consensus       149 ~~~~~~~V~~i~~spdg~~l~s-~s~dg~--I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~  225 (703)
                            .....+|+|||+.|+. .+.++.  |+++|+.+++... +..+        .......+|+|||+.+++.+..+
T Consensus       263 ------~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~~~-lt~~--------~~~~~~p~wSpDG~~I~f~s~~~  327 (448)
T PRK04792        263 ------INGAPRFSPDGKKLALVLSKDGQPEIYVVDIATKALTR-ITRH--------RAIDTEPSWHPDGKSLIFTSERG  327 (448)
T ss_pred             ------CcCCeeECCCCCEEEEEEeCCCCeEEEEEECCCCCeEE-CccC--------CCCccceEECCCCCEEEEEECCC
Confidence                  2346799999998875 455554  8888988776433 2211        12446689999999988776432


Q ss_pred             CCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCC-C---EEEEEcCCCceec----ceeeeEEEccc
Q psy7108         226 HEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTE-G---VHIYSLDSGYVFD----PFLLDISITPQ  297 (703)
Q Consensus       226 ~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~D-g---v~iwd~~~~~~~~----~~~~~~~~spd  297 (703)
                         +...+.++|+.+++..... .........+|+|||++++..+.+ +   |.++++.+++...    .......|+|+
T Consensus       328 ---g~~~Iy~~dl~~g~~~~Lt-~~g~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~~~lt~~~~d~~ps~spd  403 (448)
T PRK04792        328 ---GKPQIYRVNLASGKVSRLT-FEGEQNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAMQVLTSTRLDESPSVAPN  403 (448)
T ss_pred             ---CCceEEEEECCCCCEEEEe-cCCCCCcCeeECCCCCEEEEEEecCCceEEEEEECCCCCeEEccCCCCCCCceECCC
Confidence               2247888888877644322 222223457899999998766553 3   4556777765421    11234578999


Q ss_pred             hh
Q psy7108         298 SV  299 (703)
Q Consensus       298 ~~  299 (703)
                      +.
T Consensus       404 G~  405 (448)
T PRK04792        404 GT  405 (448)
T ss_pred             CC
Confidence            83

>PRK04043 tolB translocation protein TolB; Provisional

Probab=99.07  E-value=4.2e-08  Score=106.50  Aligned_cols=214  Identities=12%  Similarity=0.112  Sum_probs=136.7

Q ss_pred             eeeccCCCccccccccCCCcCeEEEEEcCCCCCCE-EEEEeCC---CcEEEEEcCCCceeEEEecCCCcEEEEEEecCCC
Q psy7108          29 KKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTG-MVSASWD---KTVKLWNAVETDTQHETIQLLSDALCVAYKPDGT  104 (703)
Q Consensus        29 ~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~-L~sgs~D---g~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~  104 (703)
                      .+-|.+|...  +++.... .+...+|+|  ||+. ++..+.+   ..|.++|+.+++ ...+....+......|+|||+
T Consensus       172 ~~~d~dg~~~--~~~~~~~-~~~~p~wSp--DG~~~i~y~s~~~~~~~Iyv~dl~tg~-~~~lt~~~g~~~~~~~SPDG~  245 (419)
T PRK04043        172 VLADYTLTYQ--KVIVKGG-LNIFPKWAN--KEQTAFYYTSYGERKPTLYKYNLYTGK-KEKIASSQGMLVVSDVSKDGS  245 (419)
T ss_pred             EEECCCCCce--eEEccCC-CeEeEEECC--CCCcEEEEEEccCCCCEEEEEECCCCc-EEEEecCCCcEEeeEECCCCC
Confidence            3446667655  5555443 788999999  9984 6654433   467888987764 444445666677889999998


Q ss_pred             EEEEEEC---CCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec-CC--cEE
Q psy7108         105 EIVVATL---DGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ-SK--YIC  178 (703)
Q Consensus       105 ~las~s~---dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~-dg--~I~  178 (703)
                      .++....   +..|.++|+.+++... +.....                    ......|+|||+.|+..+. .+  .|.
T Consensus       246 ~la~~~~~~g~~~Iy~~dl~~g~~~~-LT~~~~--------------------~d~~p~~SPDG~~I~F~Sdr~g~~~Iy  304 (419)
T PRK04043        246 KLLLTMAPKGQPDIYLYDTNTKTLTQ-ITNYPG--------------------IDVNGNFVEDDKRIVFVSDRLGYPNIF  304 (419)
T ss_pred             EEEEEEccCCCcEEEEEECCCCcEEE-cccCCC--------------------ccCccEECCCCCEEEEEECCCCCceEE
Confidence            7765433   3568888988776443 322211                    1234579999998887653 22  588


Q ss_pred             EEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCC---CeeEEECCCCCCCccceeecCCccceE
Q psy7108         179 IYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEG---GNVVLKLPGVKKGDMAARVLKPEVRVF  255 (703)
Q Consensus       179 lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~---~~~~i~iwd~~~~~~~~~~~~h~~~V~  255 (703)
                      ++|+.+++..+....       +.  .  ...|||||+.+++........   +...|.+.|+.+++... +... ....
T Consensus       305 ~~dl~~g~~~rlt~~-------g~--~--~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~~~-LT~~-~~~~  371 (419)
T PRK04043        305 MKKLNSGSVEQVVFH-------GK--N--NSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYIRR-LTAN-GVNQ  371 (419)
T ss_pred             EEECCCCCeEeCccC-------CC--c--CceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCeEE-CCCC-CCcC
Confidence            889988765433211       11  1  248999999998877543211   22467888888776433 3322 2233


Q ss_pred             EEEEcCCCCEEEEEeCCC----EEEEEcCCC
Q psy7108         256 CVKFSPTGQAWVAATTEG----VHIYSLDSG  282 (703)
Q Consensus       256 ~l~~spdg~~l~s~s~Dg----v~iwd~~~~  282 (703)
                      ...|+|||+.++..+.++    +.+.+++..
T Consensus       372 ~p~~SPDG~~I~f~~~~~~~~~L~~~~l~g~  402 (419)
T PRK04043        372 FPRFSSDGGSIMFIKYLGNQSALGIIRLNYN  402 (419)
T ss_pred             CeEECCCCCEEEEEEccCCcEEEEEEecCCC
Confidence            588999999886666544    556666543

>KOG3881|consensus

Probab=99.06  E-value=5.8e-09  Score=104.79  Aligned_cols=186  Identities=12%  Similarity=0.138  Sum_probs=137.6

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCC--CcEEEEEcCCCceeEEEecCCC---------cEEEEEEecC--CCEEE
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWD--KTVKLWNAVETDTQHETIQLLS---------DALCVAYKPD--GTEIV  107 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~D--g~V~iWd~~~~~~~~~~~~~~~---------~V~~v~~spd--g~~la  107 (703)
                      ..+..| ..+..+.-+|. +...+++|+..  ..+++||++..+++.+-.....         .++++.|-+.  ...||
T Consensus       143 ~~la~g-~g~~~~r~~~~-~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fa  220 (412)
T KOG3881|consen  143 IKLATG-PGLYDVRQTDT-DPYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFA  220 (412)
T ss_pred             eeeecC-CceeeeccCCC-CCceEecCchhcccceeeeecccceeeeeccCCCCccccceeeeeeccceecCCCCCceEE
Confidence            344444 45667777773 55677789988  7899999988755544433222         2567889887  78999


Q ss_pred             EEECCCeEEEEEcCCC-cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCc
Q psy7108         108 VATLDGQLIMFDVESA-AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGI  186 (703)
Q Consensus       108 s~s~dg~I~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~  186 (703)
                      +++.-+.+++||.+.+ +++..+.....                    +++++...|+|+++++|..-+.+..+|++.++
T Consensus       221 t~T~~hqvR~YDt~~qRRPV~~fd~~E~--------------------~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~k  280 (412)
T KOG3881|consen  221 TITRYHQVRLYDTRHQRRPVAQFDFLEN--------------------PISSTGLTPSGNFIYTGNTKGQLAKFDLRGGK  280 (412)
T ss_pred             EEecceeEEEecCcccCcceeEeccccC--------------------cceeeeecCCCcEEEEecccchhheecccCce
Confidence            9999999999999865 45666655443                    89999999999999999999999999999987


Q ss_pred             eEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCC
Q psy7108         187 LLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPT  262 (703)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spd  262 (703)
                      .....       +.+....+.++..+|.+++++.++-+      +.++|+|+++.+++.... -...++++.+.++
T Consensus       281 l~g~~-------~kg~tGsirsih~hp~~~~las~GLD------RyvRIhD~ktrkll~kvY-vKs~lt~il~~~~  342 (412)
T KOG3881|consen  281 LLGCG-------LKGITGSIRSIHCHPTHPVLASCGLD------RYVRIHDIKTRKLLHKVY-VKSRLTFILLRDD  342 (412)
T ss_pred             eeccc-------cCCccCCcceEEEcCCCceEEeeccc------eeEEEeecccchhhhhhh-hhccccEEEecCC
Confidence            66541       23444589999999999998887765      699999999866553322 1234556666554

>KOG2321|consensus

Probab=99.03  E-value=1.1e-08  Score=107.10  Aligned_cols=222  Identities=9%  Similarity=0.137  Sum_probs=154.0

Q ss_pred             CCCcCeEEEEEcCCCCCCEEE-EEeCCCcEEEEEcCCCceeEEEecCC--------------------------------
Q psy7108          45 GHEGPVSCIEFSPVLSSTGMV-SASWDKTVKLWNAVETDTQHETIQLL--------------------------------   91 (703)
Q Consensus        45 gH~~~V~~l~~sp~~dg~~L~-sgs~Dg~V~iWd~~~~~~~~~~~~~~--------------------------------   91 (703)
                      .|...-+.+..+|  ||+++. ||-.--.|++||+..-..  .+-.|.                                
T Consensus        49 e~p~ast~ik~s~--DGqY~lAtG~YKP~ikvydlanLSL--KFERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak~  124 (703)
T KOG2321|consen   49 EMPTASTRIKVSP--DGQYLLATGTYKPQIKVYDLANLSL--KFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAKY  124 (703)
T ss_pred             CCccccceeEecC--CCcEEEEecccCCceEEEEccccee--eeeecccccceeEEEeccchhhheEeecCceeeehhhc
Confidence            5778889999999  999765 566667899999865321  111110                                


Q ss_pred             ---------CcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEc
Q psy7108          92 ---------SDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYS  162 (703)
Q Consensus        92 ---------~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~s  162 (703)
                               ..-.+++++.-..-|++++....|+-++++.|.-+..+....                    +.++++..+
T Consensus       125 G~hy~~RIP~~GRDm~y~~~scDly~~gsg~evYRlNLEqGrfL~P~~~~~--------------------~~lN~v~in  184 (703)
T KOG2321|consen  125 GRHYRTRIPKFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFETDS--------------------GELNVVSIN  184 (703)
T ss_pred             CeeeeeecCcCCccccccCCCccEEEeecCcceEEEEcccccccccccccc--------------------ccceeeeec
Confidence                     011233333323335555556667777888777766665543                    379999999


Q ss_pred             CCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccc-----cccceeeeeccCCCEEEEEcccCCCCCeeEEECCC
Q psy7108         163 ADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGI-----NDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPG  237 (703)
Q Consensus       163 pdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd  237 (703)
                      +-..+|++|+.+|.|-.||.++...+.++....+  +..+     ...|+++.|+.+|-.++++++.|      .+.|||
T Consensus       185 ~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~--v~s~pg~~~~~svTal~F~d~gL~~aVGts~G------~v~iyD  256 (703)
T KOG2321|consen  185 EEHGLLACGTEDGVVEFWDPRDKSRVGTLDAASS--VNSHPGGDAAPSVTALKFRDDGLHVAVGTSTG------SVLIYD  256 (703)
T ss_pred             CccceEEecccCceEEEecchhhhhheeeecccc--cCCCccccccCcceEEEecCCceeEEeeccCC------cEEEEE
Confidence            9999999999999999999999887777765443  1112     23589999999999999999876      899999


Q ss_pred             CCCCccceeec-CCccceEEEEEcCCCCEEEEEeCCC--EEEEEcCCCceeccee-----eeEEEccch
Q psy7108         238 VKKGDMAARVL-KPEVRVFCVKFSPTGQAWVAATTEG--VHIYSLDSGYVFDPFL-----LDISITPQS  298 (703)
Q Consensus       238 ~~~~~~~~~~~-~h~~~V~~l~~spdg~~l~s~s~Dg--v~iwd~~~~~~~~~~~-----~~~~~spd~  298 (703)
                      +++.+++..-. +...+|..+.|.+.+..=...+.|.  ++|||-.+|+......     .++++-|++
T Consensus       257 LRa~~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S~Dk~~~kiWd~~~Gk~~asiEpt~~lND~C~~p~s  325 (703)
T KOG2321|consen  257 LRASKPLLVKDHGYELPIKKLDWQDTDQQNKVVSMDKRILKIWDECTGKPMASIEPTSDLNDFCFVPGS  325 (703)
T ss_pred             cccCCceeecccCCccceeeecccccCCCceEEecchHHhhhcccccCCceeeccccCCcCceeeecCC
Confidence            99887664332 3456789999988744433344444  8999999988754432     345666665

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=99.01  E-value=1.7e-07  Score=99.74  Aligned_cols=210  Identities=16%  Similarity=0.278  Sum_probs=135.4

Q ss_pred             cCeEEEEEcCCCCCCEEEEEe-CCCcEEEEEcCCCceeEEE---ec-----------CCCcEEEEEEecCCCEEEEEEC-
Q psy7108          48 GPVSCIEFSPVLSSTGMVSAS-WDKTVKLWNAVETDTQHET---IQ-----------LLSDALCVAYKPDGTEIVVATL-  111 (703)
Q Consensus        48 ~~V~~l~~sp~~dg~~L~sgs-~Dg~V~iWd~~~~~~~~~~---~~-----------~~~~V~~v~~spdg~~las~s~-  111 (703)
                      ..-..++++|  ++++|+++. .+|+|.++++.....+...   ..           ......++.|+|||+++++... 
T Consensus        87 ~~p~~i~~~~--~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG  164 (345)
T PF10282_consen   87 SSPCHIAVDP--DGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLG  164 (345)
T ss_dssp             SCEEEEEECT--TSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETT
T ss_pred             CCcEEEEEec--CCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecC
Confidence            4456789999  999999886 4789999999875433322   21           2345789999999998887654 


Q ss_pred             CCeEEEEEcCCCc--EEE--EEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe-cCCcEEEEECC--C
Q psy7108         112 DGQLIMFDVESAA--QVG--SVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG-QSKYICIYSSR--E  184 (703)
Q Consensus       112 dg~I~vwd~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s-~dg~I~lwD~~--~  184 (703)
                      ...|.+|+++...  ...  .+...                   .+..-..++|+|+++++.+.+ .++.|.++++.  +
T Consensus       165 ~D~v~~~~~~~~~~~l~~~~~~~~~-------------------~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~  225 (345)
T PF10282_consen  165 ADRVYVYDIDDDTGKLTPVDSIKVP-------------------PGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSD  225 (345)
T ss_dssp             TTEEEEEEE-TTS-TEEEEEEEECS-------------------TTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTT
T ss_pred             CCEEEEEEEeCCCceEEEeeccccc-------------------cCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccC
Confidence            3579999997654  222  22211                   123678899999999887654 56789999988  4


Q ss_pred             CceEEEEEeccC-CccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC--CCcc--ceeecCCccceEEEEE
Q psy7108         185 GILLKKFTITQN-KSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK--KGDM--AARVLKPEVRVFCVKF  259 (703)
Q Consensus       185 ~~~~~~~~~~~~-~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~--~~~~--~~~~~~h~~~V~~l~~  259 (703)
                      +........... ....+ ......++++|||++++++....     ..|.++++.  ++..  +..........+.+++
T Consensus       226 g~~~~~~~~~~~~~~~~~-~~~~~~i~ispdg~~lyvsnr~~-----~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~  299 (345)
T PF10282_consen  226 GSLTEIQTISTLPEGFTG-ENAPAEIAISPDGRFLYVSNRGS-----NSISVFDLDPATGTLTLVQTVPTGGKFPRHFAF  299 (345)
T ss_dssp             TEEEEEEEEESCETTSCS-SSSEEEEEE-TTSSEEEEEECTT-----TEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE
T ss_pred             CceeEEEEeeeccccccc-cCCceeEEEecCCCEEEEEeccC-----CEEEEEEEecCCCceEEEEEEeCCCCCccEEEE
Confidence            433222111111 01111 12567789999999999887653     378888873  3432  2222223344789999


Q ss_pred             cCCCCEEEEEeCCC--EEEEEcC--CCce
Q psy7108         260 SPTGQAWVAATTEG--VHIYSLD--SGYV  284 (703)
Q Consensus       260 spdg~~l~s~s~Dg--v~iwd~~--~~~~  284 (703)
                      +|+|++|+++..+.  |.+|+++  +|..
T Consensus       300 s~~g~~l~Va~~~s~~v~vf~~d~~tG~l  328 (345)
T PF10282_consen  300 SPDGRYLYVANQDSNTVSVFDIDPDTGKL  328 (345)
T ss_dssp             -TTSSEEEEEETTTTEEEEEEEETTTTEE
T ss_pred             eCCCCEEEEEecCCCeEEEEEEeCCCCcE
Confidence            99999998888665  8888764  5543

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>KOG1334|consensus

Probab=99.00  E-value=7.3e-09  Score=106.62  Aligned_cols=257  Identities=13%  Similarity=0.167  Sum_probs=174.4

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEe-cCCCcEEEEEEecC--CCEEEEEECCCeEEE
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETI-QLLSDALCVAYKPD--GTEIVVATLDGQLIM  117 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~-~~~~~V~~v~~spd--g~~las~s~dg~I~v  117 (703)
                      ..|.+|.+.|+.+.|+.  .|+.|+|||.|..|.+||...+....... +|...|....|-|.  .+.+++++.||.|++
T Consensus       136 ~kL~~H~GcVntV~FN~--~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~  213 (559)
T KOG1334|consen  136 KKLNKHKGCVNTVHFNQ--RGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRV  213 (559)
T ss_pred             hcccCCCCccceeeecc--cCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceee
Confidence            56789999999999999  99999999999999999998776555444 48888888888774  468999999999998


Q ss_pred             EEcCCC-cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCC-CEEEEEecCCcEEEEECCCCceEEEEEecc
Q psy7108         118 FDVESA-AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADG-SCILAAGQSKYICIYSSREGILLKKFTITQ  195 (703)
Q Consensus       118 wd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg-~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~  195 (703)
                      =.+... .+..+..                  ...|.++|..++.-|+. .-|.+++.|+.+.-+|++.+.+...+....
T Consensus       214 s~i~~t~~~e~t~r------------------l~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~  275 (559)
T KOG1334|consen  214 SEILETGYVENTKR------------------LAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCRE  275 (559)
T ss_pred             eeeccccceeccee------------------cccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeec
Confidence            776433 2221111                  11245588899988865 568899999999999999887665554222


Q ss_pred             CCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccc------eeec------CCccceEEEEEcCCC
Q psy7108         196 NKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMA------ARVL------KPEVRVFCVKFSPTG  263 (703)
Q Consensus       196 ~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~------~~~~------~h~~~V~~l~~spdg  263 (703)
                      ....  ..-....++..|...+.+..+..+     ..+++||.+.-...      ..+.      .....|++++++.++
T Consensus       276 ~~~~--~~v~L~~Ia~~P~nt~~faVgG~d-----qf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~  348 (559)
T KOG1334|consen  276 ADEK--ERVGLYTIAVDPRNTNEFAVGGSD-----QFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDG  348 (559)
T ss_pred             cCCc--cceeeeeEecCCCCccccccCChh-----hhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCc
Confidence            2100  012467788888887544433322     36888987653211      2222      223459999999877


Q ss_pred             CEEEEEeCCC-EEEEEcCCCce------------ecc-ee--------ee-EEEccchhhhHhhcCCcceEEEEEEecCc
Q psy7108         264 QAWVAATTEG-VHIYSLDSGYV------------FDP-FL--------LD-ISITPQSVKEALADKDYAKALMMSLKLNE  320 (703)
Q Consensus       264 ~~l~s~s~Dg-v~iwd~~~~~~------------~~~-~~--------~~-~~~spd~~~~~l~sg~~~~~l~la~~l~~  320 (703)
                      .-|.++-+|- |++|.-.-+.-            ... ++        .. --|-|..  .++.+|+.-+.|.+ |+-..
T Consensus       349 sElLaSYnDe~IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrs--EyVvSGSDCGhIFi-W~K~t  425 (559)
T KOG1334|consen  349 SELLASYNDEDIYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRS--EYVVSGSDCGHIFI-WDKKT  425 (559)
T ss_pred             cceeeeecccceEEeccccccCCCCCCCcchhhccchhhcccccccccceeeeccCcc--ceEEecCccceEEE-Eecch
Confidence            6665555555 99995432211            000 11        11 2345666  78999999999888 99877


Q ss_pred             hhHHHHH
Q psy7108         321 QGLIIHV  327 (703)
Q Consensus       321 ~~~~~~v  327 (703)
                      .+++.-+
T Consensus       426 ~eii~~M  432 (559)
T KOG1334|consen  426 GEIIRFM  432 (559)
T ss_pred             hHHHHHh
Confidence            7665543

>KOG1240|consensus

Probab=98.99  E-value=2e-08  Score=113.78  Aligned_cols=241  Identities=8%  Similarity=0.038  Sum_probs=159.2

Q ss_pred             eeecccCCceEEecCCceeeccCCCcccc-ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc--ee----
Q psy7108          12 TRETHEGGNVVLKLPGVKKGDMAARVLKP-EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD--TQ----   84 (703)
Q Consensus        12 ~~~~~~~~~~~i~~~~v~~~d~tg~~~~~-~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~--~~----   84 (703)
                      .+|...+.++.|++|+.+.-...+..... .++..-..++.++...+  .++.+|.++.||.|++.+++...  ..    
T Consensus      1062 s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~--~~~~~Av~t~DG~v~~~~id~~~~~~~~~~~ 1139 (1431)
T KOG1240|consen 1062 SLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCG--NGDQFAVSTKDGSVRVLRIDHYNVSKRVATQ 1139 (1431)
T ss_pred             ceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEecc--CCCeEEEEcCCCeEEEEEccccccccceeee
Confidence            56777888999999997754433211100 23444578899999999  99999999999999999987521  11    


Q ss_pred             EEEec--CCCcEEE-EEEec-CCC-EEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEE
Q psy7108          85 HETIQ--LLSDALC-VAYKP-DGT-EIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTV  159 (703)
Q Consensus        85 ~~~~~--~~~~V~~-v~~sp-dg~-~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i  159 (703)
                      .....  ..+.+.+ -+|.. ++. .++.+...+.|..||+++.....+++..                  ...+.|+++
T Consensus      1140 ~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~------------------~~hG~vTSi 1201 (1431)
T KOG1240|consen 1140 VRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQ------------------LRHGLVTSI 1201 (1431)
T ss_pred             eecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcC------------------ccccceeEE
Confidence            11111  2223333 34432 233 7888888999999999876554443332                  234589999


Q ss_pred             EEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCC---EEEEEcccCCCCCeeEEECC
Q psy7108         160 CYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGN---VSLIETRETHEGGNVVLKLP  236 (703)
Q Consensus       160 ~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~---~l~~~~~~~~~~~~~~i~iw  236 (703)
                      +.+|-+++++.|+..|.+.+||+|-+.++..+..+..       .+++.+..+|-.+   ..++++..+    .+.|.+|
T Consensus      1202 ~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~-------~~i~~v~~~~~~~~~S~~vs~~~~~----~nevs~w 1270 (1431)
T KOG1240|consen 1202 VIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPAR-------APIRHVWLCPTYPQESVSVSAGSSS----NNEVSTW 1270 (1431)
T ss_pred             EecCCceEEEEecCCceEEEEEeecCceeecccCccc-------CCcceEEeeccCCCCceEEEecccC----CCceeee
Confidence            9999999999999999999999999988888764333       3666666665443   444444322    2469999


Q ss_pred             CCCCCccceeecCC-------------------ccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCc
Q psy7108         237 GVKKGDMAARVLKP-------------------EVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGY  283 (703)
Q Consensus       237 d~~~~~~~~~~~~h-------------------~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~  283 (703)
                      ++.+|.+...+...                   ........+..-+..+.+|+.|. |+.||...-.
T Consensus      1271 n~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p~ 1337 (1431)
T KOG1240|consen 1271 NMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRPE 1337 (1431)
T ss_pred             ecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCCCcc
Confidence            99988654443322                   01112223333345678888888 9999986543

>PRK01029 tolB translocation protein TolB; Provisional

Probab=98.97  E-value=3.1e-08  Score=108.18  Aligned_cols=188  Identities=13%  Similarity=0.129  Sum_probs=118.2

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeC-CC----cEEEEEcCCC--ceeEEEecCC-CcEEEEEEecCCCEEEEEEC-
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASW-DK----TVKLWNAVET--DTQHETIQLL-SDALCVAYKPDGTEIVVATL-  111 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~-Dg----~V~iWd~~~~--~~~~~~~~~~-~~V~~v~~spdg~~las~s~-  111 (703)
                      +.+....+.....+|+|  ||+.|+..+. +|    .+.+|++..+  .....+.... +.....+|+|||+.|+..+. 
T Consensus       224 ~~lt~~~g~~~~p~wSP--DG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~  301 (428)
T PRK01029        224 KKILALQGNQLMPTFSP--RKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNK  301 (428)
T ss_pred             eEeecCCCCccceEECC--CCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECC
Confidence            44444555667789999  9998887653 23    3445777653  2333444332 34467899999998887663 


Q ss_pred             CCe--EEEEEcCC-CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC---CcEEEEECCCC
Q psy7108         112 DGQ--LIMFDVES-AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS---KYICIYSSREG  185 (703)
Q Consensus       112 dg~--I~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d---g~I~lwD~~~~  185 (703)
                      +|.  |++++++. +.....+....                    ..+...+|+|||+.|+..+.+   ..|.+||+.++
T Consensus       302 ~g~~~ly~~~~~~~g~~~~~lt~~~--------------------~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g  361 (428)
T PRK01029        302 DGRPRIYIMQIDPEGQSPRLLTKKY--------------------RNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATG  361 (428)
T ss_pred             CCCceEEEEECcccccceEEeccCC--------------------CCccceeECCCCCEEEEEEcCCCCcEEEEEECCCC
Confidence            564  44445432 22223332221                    245678999999999876543   36999999988


Q ss_pred             ceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCC
Q psy7108         186 ILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTG  263 (703)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg  263 (703)
                      +...... ..        ..+....|+|||+.+++....+   +...+.++|+..++... +....+.+...+|+|-.
T Consensus       362 ~~~~Lt~-~~--------~~~~~p~wSpDG~~L~f~~~~~---g~~~L~~vdl~~g~~~~-Lt~~~g~~~~p~Ws~~~  426 (428)
T PRK01029        362 RDYQLTT-SP--------ENKESPSWAIDSLHLVYSAGNS---NESELYLISLITKKTRK-IVIGSGEKRFPSWGAFP  426 (428)
T ss_pred             CeEEccC-CC--------CCccceEECCCCCEEEEEECCC---CCceEEEEECCCCCEEE-eecCCCcccCceecCCC
Confidence            7643321 11        1346689999999888765532   23578899988776443 33344556778888754

>PRK10115 protease 2; Provisional

Probab=98.96  E-value=5.1e-09  Score=120.49  Aligned_cols=94  Identities=13%  Similarity=0.039  Sum_probs=61.6

Q ss_pred             hcccCCchhhHHHhHccC--CCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhhhcccccchhhhccccccee
Q psy7108         525 ELGLYDTTATIDYILNQT--GHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLGNLVTKDMLEGLYGIYA  602 (703)
Q Consensus       525 ~~g~~d~~~~~~~i~~~~--~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  602 (703)
                      +..+.|+.++++|+.+..  ..+++++.|.|+||+++..+++..|+   .+++.++..|+..+-......-+.   ..+.
T Consensus       502 ~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pd---lf~A~v~~vp~~D~~~~~~~~~~p---~~~~  575 (686)
T PRK10115        502 KNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPE---LFHGVIAQVPFVDVVTTMLDESIP---LTTG  575 (686)
T ss_pred             CCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChh---heeEEEecCCchhHhhhcccCCCC---CChh
Confidence            355678899999999774  46899999999999988777776554   577778888877655432110000   1111


Q ss_pred             eeeeeeeecchHHHHHHHHhhCC
Q psy7108         603 LNIFQVGLYDTTATIDYILNQTG  625 (703)
Q Consensus       603 ~s~~e~~~~d~pa~i~~i~~~t~  625 (703)
                       .|.|.|.-+-|+..+|+.+.+.
T Consensus       576 -~~~e~G~p~~~~~~~~l~~~SP  597 (686)
T PRK10115        576 -EFEEWGNPQDPQYYEYMKSYSP  597 (686)
T ss_pred             -HHHHhCCCCCHHHHHHHHHcCc
Confidence             1345555555777777776653

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=98.93  E-value=6.8e-07  Score=95.13  Aligned_cols=247  Identities=14%  Similarity=0.208  Sum_probs=149.2

Q ss_pred             CcCeEEEEEcCCCCCCEEEEEeC----CCcEEEEEcCCC-ceeE---EEecCCCcEEEEEEecCCCEEEEEEC-CCeEEE
Q psy7108          47 EGPVSCIEFSPVLSSTGMVSASW----DKTVKLWNAVET-DTQH---ETIQLLSDALCVAYKPDGTEIVVATL-DGQLIM  117 (703)
Q Consensus        47 ~~~V~~l~~sp~~dg~~L~sgs~----Dg~V~iWd~~~~-~~~~---~~~~~~~~V~~v~~spdg~~las~s~-dg~I~v  117 (703)
                      ...-..++++|  ++++|+++..    ++.|..|.+... ..+.   ...........++++|++++|+++.. +|.|.+
T Consensus        36 ~~~Ps~l~~~~--~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v  113 (345)
T PF10282_consen   36 GENPSWLAVSP--DGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSV  113 (345)
T ss_dssp             SSSECCEEE-T--TSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred             CCCCceEEEEe--CCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEccCCeEEE
Confidence            34557789999  9999998866    568988888764 2222   22224455677999999999999875 889999


Q ss_pred             EEcCC-CcEEEEE--eccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec-CCcEEEEECCCCc--eEE--
Q psy7108         118 FDVES-AAQVGSV--EARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ-SKYICIYSSREGI--LLK--  189 (703)
Q Consensus       118 wd~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~-dg~I~lwD~~~~~--~~~--  189 (703)
                      +++.. +......  ..+...  +       ............++.++|||+++++... ...|.+|++....  ...  
T Consensus       114 ~~l~~~g~l~~~~~~~~~~g~--g-------~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~  184 (345)
T PF10282_consen  114 FPLDDDGSLGEVVQTVRHEGS--G-------PNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVD  184 (345)
T ss_dssp             EEECTTSEEEEEEEEEESEEE--E-------SSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEE
T ss_pred             EEccCCcccceeeeecccCCC--C-------CcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEee
Confidence            99987 4333221  111100  0       0000011235788999999999888643 3569999997654  322  


Q ss_pred             EEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC--CCc--cceeecC------CccceEEEEE
Q psy7108         190 KFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK--KGD--MAARVLK------PEVRVFCVKF  259 (703)
Q Consensus       190 ~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~--~~~--~~~~~~~------h~~~V~~l~~  259 (703)
                      .+..+.+       ..-..++|+|+++++++.....     ..|.++++.  ++.  ..+....      .......+++
T Consensus       185 ~~~~~~G-------~GPRh~~f~pdg~~~Yv~~e~s-----~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~i  252 (345)
T PF10282_consen  185 SIKVPPG-------SGPRHLAFSPDGKYAYVVNELS-----NTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAI  252 (345)
T ss_dssp             EEECSTT-------SSEEEEEE-TTSSEEEEEETTT-----TEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE
T ss_pred             ccccccC-------CCCcEEEEcCCcCEEEEecCCC-----CcEEEEeecccCCceeEEEEeeeccccccccCCceeEEE
Confidence            2222222       3457799999999988876543     367777766  332  1222211      1225788999


Q ss_pred             cCCCCEEEEEeCCC--EEEEEcC--CCce--ec------ceeeeEEEccchhhhHhh-cCCcceEEEEEEecC
Q psy7108         260 SPTGQAWVAATTEG--VHIYSLD--SGYV--FD------PFLLDISITPQSVKEALA-DKDYAKALMMSLKLN  319 (703)
Q Consensus       260 spdg~~l~s~s~Dg--v~iwd~~--~~~~--~~------~~~~~~~~spd~~~~~l~-sg~~~~~l~la~~l~  319 (703)
                      +|||++|.++....  |.+|+++  ++..  ..      .....+.++|++  ++|. +....+.+.+ ++++
T Consensus       253 spdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g--~~l~Va~~~s~~v~v-f~~d  322 (345)
T PF10282_consen  253 SPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDG--RYLYVANQDSNTVSV-FDID  322 (345)
T ss_dssp             -TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTS--SEEEEEETTTTEEEE-EEEE
T ss_pred             ecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCC--CEEEEEecCCCeEEE-EEEe
Confidence            99999997766544  9999994  2333  11      123678999999  4333 3333444444 4443

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>KOG4190|consensus

Probab=98.91  E-value=1.9e-09  Score=111.91  Aligned_cols=214  Identities=15%  Similarity=0.222  Sum_probs=150.0

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc-------eeEEEecCCCcEEEEEEecCCCEEEEEECCC
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD-------TQHETIQLLSDALCVAYKPDGTEIVVATLDG  113 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~-------~~~~~~~~~~~V~~v~~spdg~~las~s~dg  113 (703)
                      ..+.||+..|..++--.  +.+.++++|.|++|++|.++...       +......|+.+|.++.|-.+.+.++++  ||
T Consensus       729 ~nf~GH~~~iRai~Aid--NENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~Sc--D~  804 (1034)
T KOG4190|consen  729 CNFTGHQEKIRAIAAID--NENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASC--DG  804 (1034)
T ss_pred             ecccCcHHHhHHHHhcc--cccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeec--cC
Confidence            56789999999988776  78899999999999999986432       344555699999999999998888775  89


Q ss_pred             eEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEE-EecCCcEEEEECCCCceEEEEE
Q psy7108         114 QLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILA-AGQSKYICIYSSREGILLKKFT  192 (703)
Q Consensus       114 ~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s-~s~dg~I~lwD~~~~~~~~~~~  192 (703)
                      .|++||.--++.+..+.....               .+.++.|.|+. +-+...+++ ++...+|+++|.+.+.....++
T Consensus       805 giHlWDPFigr~Laq~~dapk---------------~~a~~~ikcl~-nv~~~iliAgcsaeSTVKl~DaRsce~~~E~k  868 (1034)
T KOG4190|consen  805 GIHLWDPFIGRLLAQMEDAPK---------------EGAGGNIKCLE-NVDRHILIAGCSAESTVKLFDARSCEWTCELK  868 (1034)
T ss_pred             cceeecccccchhHhhhcCcc---------------cCCCceeEecc-cCcchheeeeccchhhheeeecccccceeeEE
Confidence            999999877766543322111               11122344443 213333444 4678899999999988777766


Q ss_pred             eccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCC
Q psy7108         193 ITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTE  272 (703)
Q Consensus       193 ~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~D  272 (703)
                      .....   +-+.-+.+++..+.|+.++++-+.|      .+.+.|.++|..+.....-+.....++ .|..+.++....|
T Consensus       869 Vcna~---~Pna~~R~iaVa~~GN~lAa~LSnG------ci~~LDaR~G~vINswrpmecdllqla-apsdq~L~~sald  938 (1034)
T KOG4190|consen  869 VCNAP---GPNALTRAIAVADKGNKLAAALSNG------CIAILDARNGKVINSWRPMECDLLQLA-APSDQALAQSALD  938 (1034)
T ss_pred             eccCC---CCchheeEEEeccCcchhhHHhcCC------cEEEEecCCCceeccCCcccchhhhhc-CchhHHHHhhccc
Confidence            54322   2234678899999999998887765      788999999987665554444444444 4666677766666


Q ss_pred             C-EEE-EEcCCCce
Q psy7108         273 G-VHI-YSLDSGYV  284 (703)
Q Consensus       273 g-v~i-wd~~~~~~  284 (703)
                      . +.| |..-.+..
T Consensus       939 HslaVnWhaldgim  952 (1034)
T KOG4190|consen  939 HSLAVNWHALDGIM  952 (1034)
T ss_pred             ceeEeeehhcCCee
Confidence            6 666 77655544

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=98.89  E-value=1.1e-06  Score=91.70  Aligned_cols=251  Identities=15%  Similarity=0.127  Sum_probs=153.2

Q ss_pred             ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeC----------CCcEEEEEcCCCceeEEEecC------
Q psy7108          28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASW----------DKTVKLWNAVETDTQHETIQL------   90 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~----------Dg~V~iWd~~~~~~~~~~~~~------   90 (703)
                      +.+.| .+++.+  .++..-..+- .+ ++|  |++.|+.+..          +..|.+||..+.+...++.-.      
T Consensus        29 v~ViD~~~~~v~--g~i~~G~~P~-~~-~sp--Dg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~  102 (352)
T TIGR02658        29 VYTIDGEAGRVL--GMTDGGFLPN-PV-VAS--DGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFL  102 (352)
T ss_pred             EEEEECCCCEEE--EEEEccCCCc-ee-ECC--CCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhh
Confidence            44445 355655  5554333332 24 999  9998887754          788999999999766555432      


Q ss_pred             -CCcEEEEEEecCCCEEEEEE-C-CCeEEEEEcCCCcEEEEEeccccC---CCCC-------CCCccch--h----hccc
Q psy7108          91 -LSDALCVAYKPDGTEIVVAT-L-DGQLIMFDVESAAQVGSVEARRDL---DSGR-------LDTDLVT--R----EQSL  151 (703)
Q Consensus        91 -~~~V~~v~~spdg~~las~s-~-dg~I~vwd~~~~~~~~~~~~~~~~---~~~~-------~~~~~~~--~----~~~~  151 (703)
                       ......++++|||+++++.. . +..|.+.|+.+++.+..+.-....   ..+.       .......  .    ....
T Consensus       103 ~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~~~~vy~t~e~~~~~~~~Dg~~~~v~~d~~g~~~~  182 (352)
T TIGR02658       103 VGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPDCYHIFPTANDTFFMHCRDGSLAKVGYGTKGNPKI  182 (352)
T ss_pred             ccCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCCCcEEEEecCCccEEEeecCceEEEEecCCCceEE
Confidence             12234789999999998876 3 689999999999888766532110   0000       0000000  0    0000


Q ss_pred             CCccE---------EEEEEcC-CCCEEEEEecCCcEEEEECCCCc-----eEEEEEeccCCcccc-ccccceeeeeccCC
Q psy7108         152 KAKAV---------STVCYSA-DGSCILAAGQSKYICIYSSREGI-----LLKKFTITQNKSLDG-INDFINRRKMTEFG  215 (703)
Q Consensus       152 ~~~~V---------~~i~~sp-dg~~l~s~s~dg~I~lwD~~~~~-----~~~~~~~~~~~~~~~-~~~~v~~~~~spdg  215 (703)
                      +...+         ..-.|++ +|+++.+... |+|.+.|+....     ....+.....  .++ ......-+++++++
T Consensus       183 ~~~~vf~~~~~~v~~rP~~~~~dg~~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~--~~~wrP~g~q~ia~~~dg  259 (352)
T TIGR02658       183 KPTEVFHPEDEYLINHPAYSNKSGRLVWPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEK--ADGWRPGGWQQVAYHRAR  259 (352)
T ss_pred             eeeeeecCCccccccCCceEcCCCcEEEEecC-CeEEEEecCCCcceecceeeecccccc--ccccCCCcceeEEEcCCC
Confidence            00011         0003345 7887777666 999999965432     2222211100  000 11233449999999


Q ss_pred             CEEEEEcccCC----CCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCC-EEEEEe-CCC-EEEEEcCCCceecce
Q psy7108         216 NVSLIETRETH----EGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQ-AWVAAT-TEG-VHIYSLDSGYVFDPF  288 (703)
Q Consensus       216 ~~l~~~~~~~~----~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~-~l~s~s-~Dg-v~iwd~~~~~~~~~~  288 (703)
                      +.+++....+.    ..+...|.++|..+++.+..+.- ...++.++++||++ .|++.. .++ |.++|..+++.+...
T Consensus       260 ~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~v-G~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k~i~~i  338 (352)
T TIGR02658       260 DRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIEL-GHEIDSINVSQDAKPLLYALSTGDKTLYIFDAETGKELSSV  338 (352)
T ss_pred             CEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeC-CCceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCeEEeee
Confidence            99888542211    12224799999999988877664 34789999999999 776665 455 999999998876654

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>KOG1310|consensus

Probab=98.86  E-value=1e-08  Score=106.74  Aligned_cols=171  Identities=12%  Similarity=0.193  Sum_probs=124.8

Q ss_pred             eEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC
Q psy7108          84 QHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA  163 (703)
Q Consensus        84 ~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp  163 (703)
                      ..++.+|.+-|.|++|+.||.+|++|+.|-.+.|||.-..+.+..+...                   |...|.++.|-|
T Consensus        43 E~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~Tg-------------------HtaNIFsvKFvP  103 (758)
T KOG1310|consen   43 EAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTG-------------------HTANIFSVKFVP  103 (758)
T ss_pred             hhhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecc-------------------cccceeEEeeec
Confidence            3566789999999999999999999999999999999888877766532                   345899999998


Q ss_pred             --CCCEEEEEecCCcEEEEECCCCceEEEE--EeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC
Q psy7108         164 --DGSCILAAGQSKYICIYSSREGILLKKF--TITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK  239 (703)
Q Consensus       164 --dg~~l~s~s~dg~I~lwD~~~~~~~~~~--~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~  239 (703)
                        +.+.+++|..|..|+++|+...+.-..-  .........+|...|..++..|++...+.+++.+     ++++-+|++
T Consensus       104 ~tnnriv~sgAgDk~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasED-----GtirQyDiR  178 (758)
T KOG1310|consen  104 YTNNRIVLSGAGDKLIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASED-----GTIRQYDIR  178 (758)
T ss_pred             cCCCeEEEeccCcceEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCC-----cceeeeccc
Confidence              5678889999999999999852211000  0011123456777899999999997666665543     489999998


Q ss_pred             CCcccee-e------c---CCccceEEEEEcCCCC-EEEEEeCCC-EEEEE
Q psy7108         240 KGDMAAR-V------L---KPEVRVFCVKFSPTGQ-AWVAATTEG-VHIYS  278 (703)
Q Consensus       240 ~~~~~~~-~------~---~h~~~V~~l~~spdg~-~l~s~s~Dg-v~iwd  278 (703)
                      ....... .      .   ..--...++..+|... +|++|+.|- .++||
T Consensus       179 Eph~c~p~~~~~~~l~ny~~~lielk~ltisp~rp~~laVGgsdpfarLYD  229 (758)
T KOG1310|consen  179 EPHVCNPDEDCPSILVNYNPQLIELKCLTISPSRPYYLAVGGSDPFARLYD  229 (758)
T ss_pred             CCccCCccccccHHHHHhchhhheeeeeeecCCCCceEEecCCCchhhhhh
Confidence            6421111 1      0   1113467889999765 568888888 89999

>KOG0974|consensus

Probab=98.86  E-value=1.3e-08  Score=113.75  Aligned_cols=120  Identities=16%  Similarity=0.246  Sum_probs=106.4

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeE-EEecCCCcEEEEEEecCCCEEEEEECCCeEEEEE
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQH-ETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFD  119 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~-~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd  119 (703)
                      ..+.||.+.|.++.|+-  ||.+++|+|.|.++|+|++++.+... ..++|...|..++|.|+  .+++++.|.+.++|+
T Consensus       169 ~~l~GHeG~iF~i~~s~--dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~i~t~gedctcrvW~  244 (967)
T KOG0974|consen  169 IRLKGHEGSIFSIVTSL--DGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--RIITVGEDCTCRVWG  244 (967)
T ss_pred             ceecccCCceEEEEEcc--CCcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccc--eeEEeccceEEEEEe
Confidence            45899999999999999  99999999999999999999987665 67789999999999998  899999999999997


Q ss_pred             cCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCC
Q psy7108         120 VESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSRE  184 (703)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~  184 (703)
                      .+ ++.+..+++|.                   .+.++.++..++.-.+++++.|+.+++||+..
T Consensus       245 ~~-~~~l~~y~~h~-------------------g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~  289 (967)
T KOG0974|consen  245 VN-GTQLEVYDEHS-------------------GKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNG  289 (967)
T ss_pred             cc-cceehhhhhhh-------------------hcceeEEEEcCCceEEEeeccCcchhhhhhhc
Confidence            64 55556777765                   34799999999999999999999999999864

>KOG4547|consensus

Probab=98.84  E-value=4.7e-07  Score=96.05  Aligned_cols=179  Identities=15%  Similarity=0.173  Sum_probs=134.4

Q ss_pred             eecccCCceEEecCCceeeccCCCccccccccCCCcCeEEEEE------cCC------------CCCCEEEEEeCCCcEE
Q psy7108          13 RETHEGGNVVLKLPGVKKGDMAARVLKPEVLSGHEGPVSCIEF------SPV------------LSSTGMVSASWDKTVK   74 (703)
Q Consensus        13 ~~~~~~~~~~i~~~~v~~~d~tg~~~~~~~l~gH~~~V~~l~~------sp~------------~dg~~L~sgs~Dg~V~   74 (703)
                      .|+-..+++.+++|+........+..+...+   ++..++..|      +|.            .+-..++-|...|.|.
T Consensus         7 ~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~---s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v~   83 (541)
T KOG4547|consen    7 YFALSTGDGRLRIWDTAKNQLQQEFAPIASL---SGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSVL   83 (541)
T ss_pred             eEeecCCCCeEEEEEccCceeeeeeccchhc---cCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccEE
Confidence            4666777888888886632211111100111   233444444      221            1345778888889999


Q ss_pred             EEEcCCCceeEEEe--cCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccC
Q psy7108          75 LWNAVETDTQHETI--QLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLK  152 (703)
Q Consensus        75 iWd~~~~~~~~~~~--~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (703)
                      ++++..++....+.  .|.+.|.++.++.+-..|.+++.|+.+..|+..+.+..+.+.+...                  
T Consensus        84 ~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~------------------  145 (541)
T KOG4547|consen   84 LYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKP------------------  145 (541)
T ss_pred             EEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCC------------------
Confidence            99998886555544  3889999999999999999999999999999999999988887665                  


Q ss_pred             CccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccC-----CCEEEEEccc
Q psy7108         153 AKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEF-----GNVSLIETRE  224 (703)
Q Consensus       153 ~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spd-----g~~l~~~~~~  224 (703)
                        .+.+++++|||+.+++++  +.|++||+++++.+.+|++|..        .|+++.|..+     |.+++.+...
T Consensus       146 --~~~sl~is~D~~~l~~as--~~ik~~~~~~kevv~~ftgh~s--------~v~t~~f~~~~~g~~G~~vLssa~~  210 (541)
T KOG4547|consen  146 --LVSSLCISPDGKILLTAS--RQIKVLDIETKEVVITFTGHGS--------PVRTLSFTTLIDGIIGKYVLSSAAA  210 (541)
T ss_pred             --ccceEEEcCCCCEEEecc--ceEEEEEccCceEEEEecCCCc--------ceEEEEEEEeccccccceeeecccc
Confidence              789999999999999887  6899999999999999987766        8999998877     6776665543

>PRK04043 tolB translocation protein TolB; Provisional

Probab=98.82  E-value=1.3e-06  Score=94.94  Aligned_cols=199  Identities=12%  Similarity=0.069  Sum_probs=123.0

Q ss_pred             eEEEecCCCcEEEEEEecCCCE-EEEEECC---CeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEE
Q psy7108          84 QHETIQLLSDALCVAYKPDGTE-IVVATLD---GQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTV  159 (703)
Q Consensus        84 ~~~~~~~~~~V~~v~~spdg~~-las~s~d---g~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i  159 (703)
                      ...+... +......|+|||+. ++..+.+   ..|+++|+.+++....... .                    +.....
T Consensus       181 ~~~~~~~-~~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~~-~--------------------g~~~~~  238 (419)
T PRK04043        181 QKVIVKG-GLNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIASS-Q--------------------GMLVVS  238 (419)
T ss_pred             eeEEccC-CCeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEecC-C--------------------CcEEee
Confidence            3334334 47788999999985 6654443   4699999988876554432 1                    145667


Q ss_pred             EEcCCCCEEEEE-ec--CCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECC
Q psy7108         160 CYSADGSCILAA-GQ--SKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLP  236 (703)
Q Consensus       160 ~~spdg~~l~s~-s~--dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iw  236 (703)
                      .|+|||+.++.. +.  +..|.++|+.++...+ ++....        ......|+|||+.+++.+..+   +...|.+.
T Consensus       239 ~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~~~-LT~~~~--------~d~~p~~SPDG~~I~F~Sdr~---g~~~Iy~~  306 (419)
T PRK04043        239 DVSKDGSKLLLTMAPKGQPDIYLYDTNTKTLTQ-ITNYPG--------IDVNGNFVEDDKRIVFVSDRL---GYPNIFMK  306 (419)
T ss_pred             EECCCCCEEEEEEccCCCcEEEEEECCCCcEEE-cccCCC--------ccCccEECCCCCEEEEEECCC---CCceEEEE
Confidence            899999887754 32  3568899988876433 322111        223458999999888877542   23478888


Q ss_pred             CCCCCccceeecCCccceEEEEEcCCCCEEEEEeCC---------C-EEEEEcCCCceecc----eeeeEEEccchhhhH
Q psy7108         237 GVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTE---------G-VHIYSLDSGYVFDP----FLLDISITPQSVKEA  302 (703)
Q Consensus       237 d~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~D---------g-v~iwd~~~~~~~~~----~~~~~~~spd~~~~~  302 (703)
                      |+.+++..+......   ....|||||+.++..+..         . |.+.+++++....-    ......|+|||...+
T Consensus       307 dl~~g~~~rlt~~g~---~~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~~~LT~~~~~~~p~~SPDG~~I~  383 (419)
T PRK04043        307 KLNSGSVEQVVFHGK---NNSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYIRRLTANGVNQFPRFSSDGGSIM  383 (419)
T ss_pred             ECCCCCeEeCccCCC---cCceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCeEECCCCCCcCCeEECCCCCEEE
Confidence            988876544333211   124899999998665532         2 77778877764321    123478999994433


Q ss_pred             hhcCCcceEEEEEEecC
Q psy7108         303 LADKDYAKALMMSLKLN  319 (703)
Q Consensus       303 l~sg~~~~~l~la~~l~  319 (703)
                      ..+..........++++
T Consensus       384 f~~~~~~~~~L~~~~l~  400 (419)
T PRK04043        384 FIKYLGNQSALGIIRLN  400 (419)
T ss_pred             EEEccCCcEEEEEEecC
Confidence            33333233322234544

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=98.82  E-value=1.6e-06  Score=87.15  Aligned_cols=209  Identities=11%  Similarity=0.216  Sum_probs=140.3

Q ss_pred             EEEEEcCCCCCCEEEEEeCC-CcEEEEEcCCCcee---EEEecCCCc----------EEEEEEecCCCEEEEEEC-CCeE
Q psy7108          51 SCIEFSPVLSSTGMVSASWD-KTVKLWNAVETDTQ---HETIQLLSD----------ALCVAYKPDGTEIVVATL-DGQL  115 (703)
Q Consensus        51 ~~l~~sp~~dg~~L~sgs~D-g~V~iWd~~~~~~~---~~~~~~~~~----------V~~v~~spdg~~las~s~-dg~I  115 (703)
                      +-+++++  +|++|+++... |.|.++-+.+...+   .....|.+.          +.+..+.|++++|++... -..|
T Consensus        92 ~yvsvd~--~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri  169 (346)
T COG2706          92 CYVSVDE--DGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRI  169 (346)
T ss_pred             eEEEECC--CCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceE
Confidence            7889999  99999998753 78999988654332   334446555          889999999999988754 2479


Q ss_pred             EEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe-cCCcEEEEECCCC-ceEEEEEe
Q psy7108         116 IMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG-QSKYICIYSSREG-ILLKKFTI  193 (703)
Q Consensus       116 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s-~dg~I~lwD~~~~-~~~~~~~~  193 (703)
                      .+|++..|.....-...-                 ..+..-.-|.|+|++++....+ -+++|.+|..... ..+..++.
T Consensus       170 ~~y~~~dg~L~~~~~~~v-----------------~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~  232 (346)
T COG2706         170 FLYDLDDGKLTPADPAEV-----------------KPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQT  232 (346)
T ss_pred             EEEEcccCcccccccccc-----------------CCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeee
Confidence            999998775432221111                 1233567899999999887654 5889999998873 23333332


Q ss_pred             ccCC--ccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC--CCcc--ceeecCCccceEEEEEcCCCCEEE
Q psy7108         194 TQNK--SLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK--KGDM--AARVLKPEVRVFCVKFSPTGQAWV  267 (703)
Q Consensus       194 ~~~~--~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~--~~~~--~~~~~~h~~~V~~l~~spdg~~l~  267 (703)
                      ....  ...+ ..+...+.+++||++++++....     ..|.++.+.  ++++  ......+........|+|+|++|+
T Consensus       233 i~tlP~dF~g-~~~~aaIhis~dGrFLYasNRg~-----dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Li  306 (346)
T COG2706         233 IDTLPEDFTG-TNWAAAIHISPDGRFLYASNRGH-----DSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLI  306 (346)
T ss_pred             eccCccccCC-CCceeEEEECCCCCEEEEecCCC-----CeEEEEEEcCCCCEEEEEEEeccCCcCCccceeCCCCCEEE
Confidence            2111  0111 13556788999999999877643     256666443  3322  222223444478899999999999


Q ss_pred             EEeCCC--EEEEEcC--CCce
Q psy7108         268 AATTEG--VHIYSLD--SGYV  284 (703)
Q Consensus       268 s~s~Dg--v~iwd~~--~~~~  284 (703)
                      +++.++  +.+|..+  +|+.
T Consensus       307 aa~q~sd~i~vf~~d~~TG~L  327 (346)
T COG2706         307 AANQKSDNITVFERDKETGRL  327 (346)
T ss_pred             EEccCCCcEEEEEEcCCCceE
Confidence            999888  8888764  4444

>KOG0974|consensus

Probab=98.81  E-value=1.2e-07  Score=106.44  Aligned_cols=186  Identities=9%  Similarity=0.100  Sum_probs=137.9

Q ss_pred             CCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcE-----EEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEecccc
Q psy7108          60 SSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDA-----LCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRD  134 (703)
Q Consensus        60 dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V-----~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~  134 (703)
                      +...++.+..+..+-+||...+.....+ .+.+.+     .-+.++++.-++++|+.-+.|.+|+....+....+.+|  
T Consensus        98 e~k~i~l~~~~ns~~i~d~~~~~~~~~i-~~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~dn~p~~l~GH--  174 (967)
T KOG0974|consen   98 ENKKIALVTSRNSLLIRDSKNSSVLSKI-QSDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHEDNKPIRLKGH--  174 (967)
T ss_pred             hcceEEEEEcCceEEEEecccCceehhc-CCCceEEEEeEEEEeccCcEEEEEeccccccEEEEeccccCCcceeccc--
Confidence            5677888888889999998766433333 333322     22345667778999999999999998732222234444  


Q ss_pred             CCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccC
Q psy7108         135 LDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEF  214 (703)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spd  214 (703)
                                        .+.+.++.|+-||.++++.|.|.++++|++.+.+...       ...-+|...+..+++.|.
T Consensus       175 ------------------eG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~-------~~~fgHsaRvw~~~~~~n  229 (967)
T KOG0974|consen  175 ------------------EGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLG-------CTGFGHSARVWACCFLPN  229 (967)
T ss_pred             ------------------CCceEEEEEccCCcEEEEEecCcceeeeecccccccC-------cccccccceeEEEEeccc
Confidence                              5589999999999999999999999999999886554       122356678999999999


Q ss_pred             CCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCc-cceEEEEEcCCCCEEEEEeCCC-EEEEEcCCC
Q psy7108         215 GNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPE-VRVFCVKFSPTGQAWVAATTEG-VHIYSLDSG  282 (703)
Q Consensus       215 g~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~-~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~  282 (703)
                        .+++.+.+      .+.++|+.. +.....+..|. ..++.++.+++....+|++.|+ +++|++...
T Consensus       230 --~i~t~ged------ctcrvW~~~-~~~l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~r  290 (967)
T KOG0974|consen  230 --RIITVGED------CTCRVWGVN-GTQLEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNGR  290 (967)
T ss_pred             --eeEEeccc------eEEEEEecc-cceehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhhhhcc
Confidence              55555544      589999654 33444666665 4599999999988899999999 999998654

>KOG2315|consensus

Probab=98.80  E-value=7.6e-07  Score=93.78  Aligned_cols=202  Identities=16%  Similarity=0.233  Sum_probs=132.1

Q ss_pred             CCcCeEEEEEcCCCCCCEEEE-----EeCCCcEEEEEcCCCce--eEEEec-CCCcEEEEEEecCCCE-EEEEEC--C--
Q psy7108          46 HEGPVSCIEFSPVLSSTGMVS-----ASWDKTVKLWNAVETDT--QHETIQ-LLSDALCVAYKPDGTE-IVVATL--D--  112 (703)
Q Consensus        46 H~~~V~~l~~sp~~dg~~L~s-----gs~Dg~V~iWd~~~~~~--~~~~~~-~~~~V~~v~~spdg~~-las~s~--d--  112 (703)
                      |...|+.+.+||......+|+     .|.-+.||||.......  ...... ....=..+.|.+-|+- |+.++.  |  
T Consensus       164 ~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~~~a~ksFFkadkvqm~WN~~gt~LLvLastdVDkt  243 (566)
T KOG2315|consen  164 SVSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQHQPVANKSFFKADKVQMKWNKLGTALLVLASTDVDKT  243 (566)
T ss_pred             eccceeeEEecCCCCCceEEEEccCCCCCCcEEEEeccccccccchhhhccccccceeEEEeccCCceEEEEEEEeecCC
Confidence            578899999999212345554     34556799998763221  111111 2233345788887763 333322  3  


Q ss_pred             -------CeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEE--ecCCcEEEEECC
Q psy7108         113 -------GQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAA--GQSKYICIYSSR  183 (703)
Q Consensus       113 -------g~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~--s~dg~I~lwD~~  183 (703)
                             .++++.+++.....-.+..                     .++|.+++|+|+|+.++++  -.-..+.++|++
T Consensus       244 n~SYYGEq~Lyll~t~g~s~~V~L~k---------------------~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr  302 (566)
T KOG2315|consen  244 NASYYGEQTLYLLATQGESVSVPLLK---------------------EGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLR  302 (566)
T ss_pred             CccccccceEEEEEecCceEEEecCC---------------------CCCceEEEECCCCCEEEEEEecccceEEEEcCC
Confidence                   3577777763333322222                     3489999999999887764  455689999988


Q ss_pred             CCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCC
Q psy7108         184 EGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTG  263 (703)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg  263 (703)
                       +.++..+.  .        .+-+++-|+|.|+++++++-+.   -.+.+-+||+.+.+++..+...+  -+-+.|+|||
T Consensus       303 -~~~v~df~--e--------gpRN~~~fnp~g~ii~lAGFGN---L~G~mEvwDv~n~K~i~~~~a~~--tt~~eW~PdG  366 (566)
T KOG2315|consen  303 -GKPVFDFP--E--------GPRNTAFFNPHGNIILLAGFGN---LPGDMEVWDVPNRKLIAKFKAAN--TTVFEWSPDG  366 (566)
T ss_pred             -CCEeEeCC--C--------CCccceEECCCCCEEEEeecCC---CCCceEEEeccchhhccccccCC--ceEEEEcCCC
Confidence             44444432  1        2557899999999998877643   33479999999988777666544  3447899999


Q ss_pred             CEEEEEeC-------CCEEEEEcCCCce
Q psy7108         264 QAWVAATT-------EGVHIYSLDSGYV  284 (703)
Q Consensus       264 ~~l~s~s~-------Dgv~iwd~~~~~~  284 (703)
                      ++++|++.       +|++||+......
T Consensus       367 e~flTATTaPRlrvdNg~KiwhytG~~l  394 (566)
T KOG2315|consen  367 EYFLTATTAPRLRVDNGIKIWHYTGSLL  394 (566)
T ss_pred             cEEEEEeccccEEecCCeEEEEecCcee
Confidence            99988764       3499999864433

>PF08625 Utp13: Utp13 specific WD40 associated domain; InterPro: IPR013934 A large ribonuclear protein complex is required for the processing of the small-ribosomal-subunit rRNA - the small-subunit (SSU) processome [, ]

Probab=98.77  E-value=4.3e-09  Score=94.61  Aligned_cols=121  Identities=25%  Similarity=0.375  Sum_probs=105.0

Q ss_pred             hhhhHhhcCCcceEEEEEEecCchhHHHHHhhccC----------cchHHHHHhhccHHHHHHHHHHHHHHHhcCCChHH
Q psy7108         298 SVKEALADKDYAKALMMSLKLNEQGLIIHVLENIR----------TRDIALTVRSLAEIYLEKLLKFIAAMLEVSKHIEF  367 (703)
Q Consensus       298 ~~~~~l~sg~~~~~l~la~~l~~~~~~~~v~~~~~----------~~~i~~~~~~l~~~~~~~ll~~~~~~~~~~~~~e~  367 (703)
                      .+.+++..+++..++.+|+.++.|..+..+++.+-          ...++.++..++...+..+|+|+..|++++++...
T Consensus         3 ~L~N~l~~~~y~~Al~LAl~L~~P~~ll~i~~~~~~~~~~~~~~g~~~l~~~i~~L~~~~l~~LL~~ir~WNTNsr~~~v   82 (141)
T PF08625_consen    3 ELSNLLRQKDYKEALRLALKLDHPFRLLKILKDLLETEEDEDSIGSEELDEVIKKLDDEQLEKLLRFIRDWNTNSRTSHV   82 (141)
T ss_pred             hHHHHHHhhhHHHHHHHHHhcCCcHHHHHHHHHHHhcccccccchHHHHHHHHHhcCHHHHHHHHHHHHHhhcccccHHH
Confidence            34578899999999999999999998888876443          25599999999999999999999999999999999


Q ss_pred             HHHHHHHHHHH------cCCCchh-hHHHHHHHHHHHHhhhhceecccCCCcccchhhhhhc
Q psy7108         368 YVSWVSQILMV------LKSPSQT-TLVHLQRNLNKKYSDLAKISCQFDDTKFLPPTLFARM  422 (703)
Q Consensus       368 ~~~~l~~~l~~------l~~~~~~-~l~~L~~~l~~~~~~~~~l~~~~n~~~~sl~~~la~~  422 (703)
                      +|.++..+++.      ++.++.. .++++.+|.++|..++.++ .+..   +.+.|.++.|
T Consensus        83 AQ~vL~~il~~~~~~~L~~~~~~~~~le~lipYteRH~~Rl~~L-~q~s---yllDy~l~~M  140 (141)
T PF08625_consen   83 AQRVLNAILKSHPPEELLKIPGLKEILEALIPYTERHFQRLDRL-LQKS---YLLDYTLQQM  140 (141)
T ss_pred             HHHHHHHHHHhCCHHHHHccccHHHHHHHHhhhHHHHHHHHHHH-HHHH---HHHHHHHHhc
Confidence            99999999999      4566666 9999999999999999998 5444   6788887765

This preribosomal complex contains the U3 snoRNA and at least 40 proteins, which have the following properties: They are nucleolar. They are able to coimmunoprecipitate with the U3 snoRNA and Mpp10 (a protein specific to the SSU processome). They are required for 18S rRNA biogenesis. There appears to be a linkage between polymerase I transcription and the formation of the SSU processome; as some, but not all, of the SSU processome components are required for pre-rRNA transcription initiation. These SSU processome components have been termed t-Utps. They form a pre-complex with pre-18S rRNA in the absence of snoRNA U3 and other SSU processome components. It has been proposed that the t-Utp complex proteins are both rDNA and rRNA binding proteins that are involved in the initiation of pre18S rRNA transcription. Initially binding to rDNA then associating with the 5' end of the nascent pre18S rRNA. The t-Utpcomplex forms the nucleus around which the rest of the SSU processome components, including snoRNA U3, assemble []. From electron microscopy the SSU processome may correspond to the terminal knobs visualized at the 5' ends of nascent 18S rRNA. Utp13 is a nucleolar protein and component of the small subunit (SSU) processome containing the U3 snoRNA that is involved in processing of pre-18S rRNA []. Upt13 is also a component of the Pwp2 complex that forms part of a stable particle subunit independent of the U3 small nucleolar ribonucleoprotein that is essential for the initial assembly steps of the 90S pre-ribosome []. Components of the Pwp2 complex are: Utp1 (Pwp2), Utp6, Utp12 (Dip2), Utp13, Utp18, and Utp21. The relationship between the Pwp2 complex and the t-Utps complex [] that also associates with the 5' end of nascent pre-18S rRNA is unclear. ; GO: 0006364 rRNA processing, 0032040 small-subunit processome

>KOG1354|consensus

Probab=98.76  E-value=9.6e-08  Score=94.53  Aligned_cols=216  Identities=14%  Similarity=0.177  Sum_probs=143.5

Q ss_pred             cCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCcee----------------------------------EEEe--cCC
Q psy7108          48 GPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQ----------------------------------HETI--QLL   91 (703)
Q Consensus        48 ~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~----------------------------------~~~~--~~~   91 (703)
                      ..|+.++|.+.++...++....|++|++|.+......                                  +.+.  .|.
T Consensus        85 EKinkIrw~~~~n~a~FLlstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHt  164 (433)
T KOG1354|consen   85 EKINKIRWLDDGNLAEFLLSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHT  164 (433)
T ss_pred             hhhhhceecCCCCccEEEEecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccce
Confidence            5789999998444557777788999999988543211                                  1111  245


Q ss_pred             CcEEEEEEecCCCEEEEEECCCeEEEEEcCCCc-EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC-CCEEE
Q psy7108          92 SDALCVAYKPDGTEIVVATLDGQLIMFDVESAA-QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD-GSCIL  169 (703)
Q Consensus        92 ~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd-g~~l~  169 (703)
                      -.|.++.++.|+..++++ .|=.|.+|+++-.. ......-...             .-..-..-|++..|+|. .+.++
T Consensus       165 yhiNSIS~NsD~Et~lSA-DdLRINLWnlei~d~sFnIVDIKP~-------------nmEeLteVITsaEFhp~~cn~f~  230 (433)
T KOG1354|consen  165 YHINSISVNSDKETFLSA-DDLRINLWNLEIIDQSFNIVDIKPA-------------NMEELTEVITSAEFHPHHCNVFV  230 (433)
T ss_pred             eEeeeeeecCccceEeec-cceeeeeccccccCCceeEEEcccc-------------CHHHHHHHHhhhccCHhHccEEE
Confidence            568899999999988887 57889999986332 2222111100             00001225788899995 45677


Q ss_pred             EEecCCcEEEEECCCCceE----EEEEeccC----CccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC-C
Q psy7108         170 AAGQSKYICIYSSREGILL----KKFTITQN----KSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK-K  240 (703)
Q Consensus       170 s~s~dg~I~lwD~~~~~~~----~~~~~~~~----~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~-~  240 (703)
                      -.+..|+|++.|++.....    +.|..+..    .-.....+.|..+.|+++|+++++-..       .+|++||+. .
T Consensus       231 YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRDy-------ltvk~wD~nme  303 (433)
T KOG1354|consen  231 YSSSKGTIRLCDMRQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDY-------LTVKLWDLNME  303 (433)
T ss_pred             EecCCCcEEEeechhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEecc-------ceeEEEecccc
Confidence            7888899999999964321    22222111    112233457888999999999987654       389999984 4


Q ss_pred             CccceeecCCc------------cc---eEEEEEcCCCCEEEEEeCCC-EEEEEcCCCce
Q psy7108         241 GDMAARVLKPE------------VR---VFCVKFSPTGQAWVAATTEG-VHIYSLDSGYV  284 (703)
Q Consensus       241 ~~~~~~~~~h~------------~~---V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~  284 (703)
                      .+++..+.-|.            ..   -..++|+.++.+++||+... +++|++..|..
T Consensus       304 ~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~~~v~TGsy~n~frvf~~~~gsk  363 (433)
T KOG1354|consen  304 AKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGNDSYVMTGSYNNVFRVFNLARGSK  363 (433)
T ss_pred             CCcceEEeehHhHHHHHHHHhhccchhheeEEEEcCCcceEecccccceEEEecCCCCcc
Confidence            55665555442            11   24578999999999999999 89999776654

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=98.75  E-value=4.3e-06  Score=84.20  Aligned_cols=254  Identities=14%  Similarity=0.189  Sum_probs=154.5

Q ss_pred             cccCCCcCeEEEEEcCCCCCCEEEEEeC---CCcEEEEEcCCC-ceeEE---EecCCCcEEEEEEecCCCEEEEEEC-CC
Q psy7108          42 VLSGHEGPVSCIEFSPVLSSTGMVSASW---DKTVKLWNAVET-DTQHE---TIQLLSDALCVAYKPDGTEIVVATL-DG  113 (703)
Q Consensus        42 ~l~gH~~~V~~l~~sp~~dg~~L~sgs~---Dg~V~iWd~~~~-~~~~~---~~~~~~~V~~v~~spdg~~las~s~-dg  113 (703)
                      .+-.+.+..+-++|+|  +++.|.++-.   +|.|-.+.++.. +....   ......+...++++++|++++++.. .|
T Consensus        34 ~~v~~~~nptyl~~~~--~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~g  111 (346)
T COG2706          34 QLVAELGNPTYLAVNP--DQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDEDGRFVFVANYHSG  111 (346)
T ss_pred             hhccccCCCceEEECC--CCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECCCCCEEEEEEccCc
Confidence            4456778899999999  9999998854   477877777643 22211   1122334477999999999999876 47


Q ss_pred             eEEEEEcCC-CcEEEEE--eccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec-CCcEEEEECCCCceEE
Q psy7108         114 QLIMFDVES-AAQVGSV--EARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ-SKYICIYSSREGILLK  189 (703)
Q Consensus       114 ~I~vwd~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~-dg~I~lwD~~~~~~~~  189 (703)
                      .|.++.++. |......  ..|..  .+   ..  ..+.   ...+....++|++++|+++.- -..|.+|++..|....
T Consensus       112 ~v~v~p~~~dG~l~~~v~~~~h~g--~~---p~--~rQ~---~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~  181 (346)
T COG2706         112 SVSVYPLQADGSLQPVVQVVKHTG--SG---PH--ERQE---SPHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTP  181 (346)
T ss_pred             eEEEEEcccCCccccceeeeecCC--CC---CC--cccc---CCccceeeeCCCCCEEEEeecCCceEEEEEcccCcccc
Confidence            899999865 4332221  11111  00   00  0000   113678889999999998753 3469999999876543


Q ss_pred             EEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCC--Cc--cceeec------CCccceEEEEE
Q psy7108         190 KFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKK--GD--MAARVL------KPEVRVFCVKF  259 (703)
Q Consensus       190 ~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~--~~--~~~~~~------~h~~~V~~l~~  259 (703)
                      .-....   ..  ...-+.+.|+|++++.++.+.-.     .+|.+|....  ++  .++.+.      .......++..
T Consensus       182 ~~~~~v---~~--G~GPRHi~FHpn~k~aY~v~EL~-----stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhi  251 (346)
T COG2706         182 ADPAEV---KP--GAGPRHIVFHPNGKYAYLVNELN-----STVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHI  251 (346)
T ss_pred             cccccc---CC--CCCcceEEEcCCCcEEEEEeccC-----CEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEE
Confidence            322111   11  13457799999999888766432     4788886655  32  222221      12345778899


Q ss_pred             cCCCCEEEEEeCCC--EEEEEcCCC-ceec---------ceeeeEEEccchhhhHhhcCCcceEEEEEEecC
Q psy7108         260 SPTGQAWVAATTEG--VHIYSLDSG-YVFD---------PFLLDISITPQSVKEALADKDYAKALMMSLKLN  319 (703)
Q Consensus       260 spdg~~l~s~s~Dg--v~iwd~~~~-~~~~---------~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~  319 (703)
                      +|||++|.++...-  |-+|.++.. ..+.         .+..+..+++.+.. +++++.....+.+ ++.+
T Consensus       252 s~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~-Liaa~q~sd~i~v-f~~d  321 (346)
T COG2706         252 SPDGRFLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRF-LIAANQKSDNITV-FERD  321 (346)
T ss_pred             CCCCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcCCccceeCCCCCE-EEEEccCCCcEEE-EEEc
Confidence            99999997766533  788877543 2111         11256778888722 3344444444444 5544

>KOG1064|consensus

Probab=98.70  E-value=6.9e-08  Score=112.99  Aligned_cols=201  Identities=13%  Similarity=0.168  Sum_probs=150.0

Q ss_pred             cccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEec-CCCcEEEEEEecCCCEEEEEECCCeEEEEEc
Q psy7108          42 VLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQ-LLSDALCVAYKPDGTEIVVATLDGQLIMFDV  120 (703)
Q Consensus        42 ~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~-~~~~V~~v~~spdg~~las~s~dg~I~vwd~  120 (703)
                      .+..|-..|.++.=+|  ...+.+||+.||.|++|....++.+..... ....|+.+.|+.+|+.+..+..||.+.+|.+
T Consensus      2203 ~~k~~v~~v~r~~sHp--~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~ 2280 (2439)
T KOG1064|consen 2203 MIKHPVENVRRMTSHP--SDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQA 2280 (2439)
T ss_pred             EeecccCceeeecCCC--CCceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeeccc
Confidence            4455677889999999  888999999999999999877766544433 3478999999999999999999999999998


Q ss_pred             CCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe---cCCcEEEEECCCCceEEEEEeccCC
Q psy7108         121 ESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG---QSKYICIYSSREGILLKKFTITQNK  197 (703)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s---~dg~I~lwD~~~~~~~~~~~~~~~~  197 (703)
                      . .+.....+.|..                    ......|-.  ..+++++   .++.+++||.--.....-  .|   
T Consensus      2281 ~-pk~~~s~qchnk--------------------~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s~--v~--- 2332 (2439)
T KOG1064|consen 2281 S-PKPYTSWQCHNK--------------------ALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNSL--VH--- 2332 (2439)
T ss_pred             C-CcceeccccCCc--------------------cccceeeee--hhhhccccCCCCCcccchhcccCcccce--ee---
Confidence            7 445555555542                    556666654  5566653   457899999653211110  01   


Q ss_pred             ccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEE
Q psy7108         198 SLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHI  276 (703)
Q Consensus       198 ~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~i  276 (703)
                        .+|...++++++.|..+.+++++..|      .|++||++..+..+.+..         +. ...++++++..| ++|
T Consensus      2333 --~~H~~gaT~l~~~P~~qllisggr~G------~v~l~D~rqrql~h~~~~---------~~-~~~~f~~~ss~g~ikI 2394 (2439)
T KOG1064|consen 2333 --TCHDGGATVLAYAPKHQLLISGGRKG------EVCLFDIRQRQLRHTFQA---------LD-TREYFVTGSSEGNIKI 2394 (2439)
T ss_pred             --eecCCCceEEEEcCcceEEEecCCcC------cEEEeehHHHHHHHHhhh---------hh-hhheeeccCcccceEE
Confidence              24556899999999999999988775      799999998777665543         44 567899999999 999


Q ss_pred             EEcCCCceecceee
Q psy7108         277 YSLDSGYVFDPFLL  290 (703)
Q Consensus       277 wd~~~~~~~~~~~~  290 (703)
                      |++..-..+..+..
T Consensus      2395 w~~s~~~ll~~~p~ 2408 (2439)
T KOG1064|consen 2395 WRLSEFGLLHTFPS 2408 (2439)
T ss_pred             EEccccchhhcCch
Confidence            99987666555543

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=98.69  E-value=5.3e-06  Score=99.96  Aligned_cols=220  Identities=10%  Similarity=0.037  Sum_probs=134.2

Q ss_pred             eEEEEEcCCCCCCEEEEEe-CCCcEEEEEcCCCceeEEEecC-----------------CCcEEEEEEecC-CCEEEEEE
Q psy7108          50 VSCIEFSPVLSSTGMVSAS-WDKTVKLWNAVETDTQHETIQL-----------------LSDALCVAYKPD-GTEIVVAT  110 (703)
Q Consensus        50 V~~l~~sp~~dg~~L~sgs-~Dg~V~iWd~~~~~~~~~~~~~-----------------~~~V~~v~~spd-g~~las~s  110 (703)
                      -..+++++  +++.|+.+. ..+.|+++|..++ .+..+...                 -.....++++|+ +..+++.+
T Consensus       626 P~GIavd~--~gn~LYVaDt~n~~Ir~id~~~~-~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~  702 (1057)
T PLN02919        626 PQGLAYNA--KKNLLYVADTENHALREIDFVNE-TVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMA  702 (1057)
T ss_pred             CcEEEEeC--CCCEEEEEeCCCceEEEEecCCC-EEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEEC
Confidence            47899999  887666654 4567999998665 33332110                 113467999994 55566667


Q ss_pred             CCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEE-EecCCcEEEEECCCCceEE
Q psy7108         111 LDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILA-AGQSKYICIYSSREGILLK  189 (703)
Q Consensus       111 ~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s-~s~dg~I~lwD~~~~~~~~  189 (703)
                      .++.|++||..++... .+.+.......  ...   ............++++|+++.|++ -+.++.|++||+.++....
T Consensus       703 ~~~~I~v~d~~~g~v~-~~~G~G~~~~~--~g~---~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~  776 (1057)
T PLN02919        703 GQHQIWEYNISDGVTR-VFSGDGYERNL--NGS---SGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRL  776 (1057)
T ss_pred             CCCeEEEEECCCCeEE-EEecCCccccC--CCC---ccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEE
Confidence            7889999999877543 33221100000  000   000011224577999999986554 4566899999998765321


Q ss_pred             EEEecc-------------CCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeec--------
Q psy7108         190 KFTITQ-------------NKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL--------  248 (703)
Q Consensus       190 ~~~~~~-------------~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~--------  248 (703)
                      ...+..             +............++++++|..+++...+      ..|++||..++.......        
T Consensus       777 ~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N------~rIrviD~~tg~v~tiaG~G~~G~~d  850 (1057)
T PLN02919        777 LAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYN------HKIKKLDPATKRVTTLAGTGKAGFKD  850 (1057)
T ss_pred             EEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCC------CEEEEEECCCCeEEEEeccCCcCCCC
Confidence            111000             00000111234578999999876665544      489999988765432211        


Q ss_pred             -----CCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCce
Q psy7108         249 -----KPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYV  284 (703)
Q Consensus       249 -----~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~  284 (703)
                           ..-.....++++++|+.+++-+.++ |++||+.++..
T Consensus       851 G~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~~~~  892 (1057)
T PLN02919        851 GKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLNKGEA  892 (1057)
T ss_pred             CcccccccCCceEEEEeCCCCEEEEECCCCEEEEEECCCCcc
Confidence                 1112477899999999878777777 99999988764

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=98.68  E-value=2.2e-06  Score=88.29  Aligned_cols=180  Identities=14%  Similarity=0.086  Sum_probs=133.6

Q ss_pred             EcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCC-eEEEEEcCCCcEEEEEeccc
Q psy7108          55 FSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDG-QLIMFDVESAAQVGSVEARR  133 (703)
Q Consensus        55 ~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg-~I~vwd~~~~~~~~~~~~~~  133 (703)
                      |++. +|++++..|. |...|.+...+  ......+.+.|.-..+.-+++-++.|..|| .+-|+|.++++..+....- 
T Consensus       327 fa~~-~Gd~ia~VSR-GkaFi~~~~~~--~~iqv~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~kr~e~~l-  401 (668)
T COG4946         327 FAVV-NGDYIALVSR-GKAFIMRPWDG--YSIQVGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEVKRIEKDL-  401 (668)
T ss_pred             hccC-CCcEEEEEec-CcEEEECCCCC--eeEEcCCCCceEEEEEccCCcceEEeccCCceEEEEecCCceEEEeeCCc-
Confidence            4543 6889998887 56666665444  233456778899999998888999999999 8999999988755443332 


Q ss_pred             cCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeecc
Q psy7108         134 DLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTE  213 (703)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp  213 (703)
                                          +.|.++..+|||++++++.....+.+.|+.++.....=+.        ...-|+...|+|
T Consensus       402 --------------------g~I~av~vs~dGK~~vvaNdr~el~vididngnv~~idkS--------~~~lItdf~~~~  453 (668)
T COG4946         402 --------------------GNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVRLIDKS--------EYGLITDFDWHP  453 (668)
T ss_pred             --------------------cceEEEEEcCCCcEEEEEcCceEEEEEEecCCCeeEeccc--------ccceeEEEEEcC
Confidence                                2699999999999999998888999999999876433221        223789999999


Q ss_pred             CCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEe
Q psy7108         214 FGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAAT  270 (703)
Q Consensus       214 dg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s  270 (703)
                      ++++++.+--++.-.  ..|+++|+.+++..... .....=.+-+|.||+++|.--+
T Consensus       454 nsr~iAYafP~gy~t--q~Iklydm~~~Kiy~vT-T~ta~DfsPaFD~d~ryLYfLs  507 (668)
T COG4946         454 NSRWIAYAFPEGYYT--QSIKLYDMDGGKIYDVT-TPTAYDFSPAFDPDGRYLYFLS  507 (668)
T ss_pred             CceeEEEecCcceee--eeEEEEecCCCeEEEec-CCcccccCcccCCCCcEEEEEe
Confidence            999999988765433  47999999887654332 2333334568999999886544

>KOG0309|consensus

Probab=98.68  E-value=6.8e-08  Score=103.92  Aligned_cols=209  Identities=16%  Similarity=0.215  Sum_probs=149.2

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEE-EecCCCcEEEEEEecCCCEEEEEECCCeEEEEE
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHE-TIQLLSDALCVAYKPDGTEIVVATLDGQLIMFD  119 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~-~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd  119 (703)
                      -.+.||+..|+.+-|+|. ....+++++.|-.+..||+.+...... ...-......|+|+-....+.+.+..+.|++||
T Consensus       108 f~lhghsraitd~n~~~q-~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlasshg~~i~vwd  186 (1081)
T KOG0309|consen  108 FVLHGHSRAITDINFNPQ-HPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSHGNDIFVWD  186 (1081)
T ss_pred             EEEecCccceeccccCCC-CCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhccCCceEEEe
Confidence            467899999999999995 678999999999999999987654433 333455678899987666666667788899999


Q ss_pred             cCCC-cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC-CCCEEEEEecCCcEEEEECCCCceEEEEEeccCC
Q psy7108         120 VESA-AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA-DGSCILAAGQSKYICIYSSREGILLKKFTITQNK  197 (703)
Q Consensus       120 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp-dg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~  197 (703)
                      .+.| .++..+++|..                    .|..++|+. ....+.+++.|++|+.||..............+ 
T Consensus       187 ~r~gs~pl~s~K~~vs--------------------~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~vtt~-  245 (1081)
T KOG0309|consen  187 LRKGSTPLCSLKGHVS--------------------SVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRTVTTN-  245 (1081)
T ss_pred             ccCCCcceEEecccce--------------------eeehHHHhhhhhhhhcccCCCCceeeecccccccccceecccc-
Confidence            9866 56677777654                    678888865 335678899999999999876543332222222 


Q ss_pred             ccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECC---------CCCC-CccceeecCCccceEEEEEcCCCC---
Q psy7108         198 SLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLP---------GVKK-GDMAARVLKPEVRVFCVKFSPTGQ---  264 (703)
Q Consensus       198 ~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iw---------d~~~-~~~~~~~~~h~~~V~~l~~spdg~---  264 (703)
                            .++....+.|-|....+--..|.    ..+.++         +..+ .+++..+.+|+..|....|-..+.   
T Consensus       246 ------~piw~~r~~Pfg~g~~~mp~~G~----n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~  315 (1081)
T KOG0309|consen  246 ------FPIWRGRYLPFGEGYCIMPMVGG----NMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKECDG  315 (1081)
T ss_pred             ------CcceeccccccCceeEeccccCC----eeeeeccccchhhhhccccCCcceeeecCcchHHHHHhhhhcccccC
Confidence                  36666777887776555443321    233333         3332 367888999999887776654322   


Q ss_pred             -------EEEEEeCCC-EEEEEcCC
Q psy7108         265 -------AWVAATTEG-VHIYSLDS  281 (703)
Q Consensus       265 -------~l~s~s~Dg-v~iwd~~~  281 (703)
                             .|+|-+.|. +++|-+.+
T Consensus       316 d~d~rdfQLVTWSkD~~lrlWpI~~  340 (1081)
T KOG0309|consen  316 DYDSRDFQLVTWSKDQTLRLWPIDS  340 (1081)
T ss_pred             CCCccceeEEEeecCCceEeeeccH
Confidence                   589999999 99998765

>KOG1409|consensus

Probab=98.67  E-value=2.8e-07  Score=91.34  Aligned_cols=219  Identities=15%  Similarity=0.248  Sum_probs=151.8

Q ss_pred             CccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEec--CCCcEEEEEEecCCCEEEEEECCC
Q psy7108          36 RVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQ--LLSDALCVAYKPDGTEIVVATLDG  113 (703)
Q Consensus        36 ~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~--~~~~V~~v~~spdg~~las~s~dg  113 (703)
                      .++  +.++||.+.|++...-|  ...-+++.+.|.++|||--.+..+-.....  ...+++++.+.++...|++|-..|
T Consensus        15 ~ll--~~~eG~~d~vn~~~l~~--~e~gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ng   90 (404)
T KOG1409|consen   15 ELL--SKIEGSQDDVNAAILIP--KEEGVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDNG   90 (404)
T ss_pred             hhh--hhhcCchhhhhhheecc--CCCCeEEccccceeeeEEeccccccCchhhhhCCCCceEeeeeccceEEEEEEecc
Confidence            345  78899999999999999  777899999999999996544433333332  456789999999999999999999


Q ss_pred             eEEEEEcCC----CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEE
Q psy7108         114 QLIMFDVES----AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLK  189 (703)
Q Consensus       114 ~I~vwd~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~  189 (703)
                      ++.-+.+..    ....+....                    |...+..+-|+-...++++.+.|..+.---.+.+..+.
T Consensus        91 tvtefs~sedfnkm~~~r~~~~--------------------h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg  150 (404)
T KOG1409|consen   91 TVTEFALSEDFNKMTFLKDYLA--------------------HQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLG  150 (404)
T ss_pred             eEEEEEhhhhhhhcchhhhhhh--------------------hhcceeeEEecCCceeEEEeccccceEEEeeccCCccc
Confidence            988876532    222222222                    33466666666666666666665544322222211110


Q ss_pred             -----------------EEEec----------------cCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECC
Q psy7108         190 -----------------KFTIT----------------QNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLP  236 (703)
Q Consensus       190 -----------------~~~~~----------------~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iw  236 (703)
                                       .+.+.                .-....+|...+.+.+|.+....++++..+      ..+.+|
T Consensus       151 ~Y~~~~~~t~~~~d~~~~fvGd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d------~~vi~w  224 (404)
T KOG1409|consen  151 GYNFETPASALQFDALYAFVGDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASD------HSVIMW  224 (404)
T ss_pred             ceEeeccCCCCceeeEEEEecccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEecccc------CceEEE
Confidence                             00000                001234677799999999999988887765      489999


Q ss_pred             CCCCCc-cceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCce
Q psy7108         237 GVKKGD-MAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYV  284 (703)
Q Consensus       237 d~~~~~-~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~  284 (703)
                      |+...+ ......+|...|..+..-+--+.+.+++.|| |.+|+.+....
T Consensus       225 digg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn~~r~  274 (404)
T KOG1409|consen  225 DIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDGGIVVWNMNVKRV  274 (404)
T ss_pred             eccCCcceeeeeccchhhhhhhhhhhhheeeeeccCCCeEEEEeccceee
Confidence            987553 3446678999999998888889999999999 99999876543

>KOG1832|consensus

Probab=98.65  E-value=1.7e-08  Score=110.30  Aligned_cols=200  Identities=15%  Similarity=0.139  Sum_probs=150.5

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCC--eEEEE
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDG--QLIMF  118 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg--~I~vw  118 (703)
                      +++..|+..-+|++|+-  +.++|+.|+..|.|+++++.+|........|.++|+-+.-+.||..+++.+.-.  -..+|
T Consensus      1095 ~~frd~~~~fTc~afs~--~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW 1172 (1516)
T KOG1832|consen 1095 RSFRDETALFTCIAFSG--GTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALW 1172 (1516)
T ss_pred             hhhhccccceeeEEeec--CCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHHh
Confidence            67788999999999999  899999999999999999999988888888999999999999999877765543  46789


Q ss_pred             EcCC-CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEE-EeccC
Q psy7108         119 DVES-AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKF-TITQN  196 (703)
Q Consensus       119 d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~-~~~~~  196 (703)
                      ++.+ +...+++.+                        -.++.|+.....-+.|+......+||+.++..+.++ .....
T Consensus      1173 ~~~s~~~~~Hsf~e------------------------d~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~ 1228 (1516)
T KOG1832|consen 1173 DASSTGGPRHSFDE------------------------DKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVT 1228 (1516)
T ss_pred             ccccccCccccccc------------------------cceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchh
Confidence            9854 445555544                        346788776555555655567899999998776663 22211


Q ss_pred             CccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCCEEE
Q psy7108         197 KSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHI  276 (703)
Q Consensus       197 ~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dgv~i  276 (703)
                           ....-+...|+|+.+.++-.+           .+||++..+.++++......+. =.|+|.|..++.-+    -|
T Consensus      1229 -----~~y~~n~a~FsP~D~LIlndG-----------vLWDvR~~~aIh~FD~ft~~~~-G~FHP~g~eVIINS----EI 1287 (1516)
T KOG1832|consen 1229 -----SSYSNNLAHFSPCDTLILNDG-----------VLWDVRIPEAIHRFDQFTDYGG-GGFHPSGNEVIINS----EI 1287 (1516)
T ss_pred             -----hhhhccccccCCCcceEeeCc-----------eeeeeccHHHHhhhhhheeccc-ccccCCCceEEeec----hh
Confidence                 111236788999999876422           4899998888877776653333 35999999988877    49


Q ss_pred             EEcCCCceecc
Q psy7108         277 YSLDSGYVFDP  287 (703)
Q Consensus       277 wd~~~~~~~~~  287 (703)
                      ||+.+-+.+..
T Consensus      1288 wD~RTF~lLh~ 1298 (1516)
T KOG1832|consen 1288 WDMRTFKLLHS 1298 (1516)
T ss_pred             hhhHHHHHHhc
Confidence            99988766443

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=98.63  E-value=4.7e-07  Score=88.42  Aligned_cols=258  Identities=11%  Similarity=0.156  Sum_probs=157.2

Q ss_pred             CCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc-eeE----EEecC------------CCcEEEEEEecCCC--EE
Q psy7108          46 HEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD-TQH----ETIQL------------LSDALCVAYKPDGT--EI  106 (703)
Q Consensus        46 H~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~-~~~----~~~~~------------~~~V~~v~~spdg~--~l  106 (703)
                      ..+.|+++.|..  .|.+|++|...|.|.++.-+... +..    .+..|            ...|..+.|..++.  .+
T Consensus        25 ead~ItaVefd~--tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hF  102 (460)
T COG5170          25 EADKITAVEFDE--TGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHF  102 (460)
T ss_pred             ccceeeEEEecc--ccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceE
Confidence            356799999999  89999999999999999754332 111    12223            24578888876653  56


Q ss_pred             EEEECCCeEEEEEcCCCcEEEEEe-----ccccCCCC-----------C-CCCccch------hhcccCCccEEEEEEcC
Q psy7108         107 VVATLDGQLIMFDVESAAQVGSVE-----ARRDLDSG-----------R-LDTDLVT------REQSLKAKAVSTVCYSA  163 (703)
Q Consensus       107 as~s~dg~I~vwd~~~~~~~~~~~-----~~~~~~~~-----------~-~~~~~~~------~~~~~~~~~V~~i~~sp  163 (703)
                      +..+.|++|++|.+........-+     +-....++           + .+.+...      ....+|.-.+.++.|+.
T Consensus       103 LlstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~Ns  182 (460)
T COG5170         103 LLSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNS  182 (460)
T ss_pred             EEecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecC
Confidence            677789999999986542211000     00000000           0 0111110      12245777799999999


Q ss_pred             CCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCC-EEEEEcccCCCCCeeEEECCCCCCCc
Q psy7108         164 DGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGN-VSLIETRETHEGGNVVLKLPGVKKGD  242 (703)
Q Consensus       164 dg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~-~l~~~~~~~~~~~~~~i~iwd~~~~~  242 (703)
                      |...++++ .|=.|.+|++.--.-...+..-...........|++..|+|... .+..+++.|      .|++-|++...
T Consensus       183 D~et~lSa-DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG------~Ikl~DlRq~a  255 (460)
T COG5170         183 DKETLLSA-DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKG------EIKLNDLRQSA  255 (460)
T ss_pred             chheeeec-cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCC------cEEehhhhhhh
Confidence            98888775 46789999987532222221111112233345788899999764 444455543      79999988532


Q ss_pred             cce--------eec--------CCccceEEEEEcCCCCEEEEEeCCCEEEEEcCCCce-ecce-----------------
Q psy7108         243 MAA--------RVL--------KPEVRVFCVKFSPTGQAWVAATTEGVHIYSLDSGYV-FDPF-----------------  288 (703)
Q Consensus       243 ~~~--------~~~--------~h~~~V~~l~~spdg~~l~s~s~Dgv~iwd~~~~~~-~~~~-----------------  288 (703)
                      ...        .+.        +-...|..+.|+++|+++++-+.-.|+|||+...+. +.+.                 
T Consensus       256 lcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdyltvkiwDvnm~k~pikTi~~h~~l~~~l~d~YEnD  335 (460)
T COG5170         256 LCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDYLTVKIWDVNMAKNPIKTIPMHCDLMDELNDVYEND  335 (460)
T ss_pred             hccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEeccceEEEEecccccCCceeechHHHHHHHHHhhhhcc
Confidence            110        011        113468889999999999988777799999875432 1111                 


Q ss_pred             ----eeeEEEccchhhhHhhcCCcceEEEE
Q psy7108         289 ----LLDISITPQSVKEALADKDYAKALMM  314 (703)
Q Consensus       289 ----~~~~~~spd~~~~~l~sg~~~~~l~l  314 (703)
                          ...+.||.|.  ..+.+|++.....+
T Consensus       336 aifdkFeisfSgd~--~~v~sgsy~NNfgi  363 (460)
T COG5170         336 AIFDKFEISFSGDD--KHVLSGSYSNNFGI  363 (460)
T ss_pred             ceeeeEEEEecCCc--ccccccccccceee
Confidence                1346777766  56667776655443

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=98.61  E-value=5e-06  Score=85.78  Aligned_cols=148  Identities=16%  Similarity=0.150  Sum_probs=117.5

Q ss_pred             cCCCcCeEEEEEcCCCCCCEEEEEeCCC-cEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCC
Q psy7108          44 SGHEGPVSCIEFSPVLSSTGMVSASWDK-TVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVES  122 (703)
Q Consensus        44 ~gH~~~V~~l~~sp~~dg~~L~sgs~Dg-~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~  122 (703)
                      -+|.+.|.-..+..  +++-++.|..|| .+-|+|..++ +.......-+.|.+++.+|+|+.++++.....+.+.|+++
T Consensus       356 v~~~~~VrY~r~~~--~~e~~vigt~dgD~l~iyd~~~~-e~kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididn  432 (668)
T COG4946         356 VGKKGGVRYRRIQV--DPEGDVIGTNDGDKLGIYDKDGG-EVKRIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDN  432 (668)
T ss_pred             cCCCCceEEEEEcc--CCcceEEeccCCceEEEEecCCc-eEEEeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecC
Confidence            36888899999988  888999999999 7899998776 5666667778899999999999999999889999999999


Q ss_pred             CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCC----cEEEEECCCCceEEEEEeccCCc
Q psy7108         123 AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSK----YICIYSSREGILLKKFTITQNKS  198 (703)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg----~I~lwD~~~~~~~~~~~~~~~~~  198 (703)
                      +.....-+...                    +-|+..+|+|+++++|-+-.+|    .|+++|+.+++.....+ +..  
T Consensus       433 gnv~~idkS~~--------------------~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~vTT-~ta--  489 (668)
T COG4946         433 GNVRLIDKSEY--------------------GLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDVTT-PTA--  489 (668)
T ss_pred             CCeeEeccccc--------------------ceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEEecC-Ccc--
Confidence            98654433333                    2699999999999999876655    69999999887654432 111  


Q ss_pred             cccccccceeeeeccCCCEEEEEcc
Q psy7108         199 LDGINDFINRRKMTEFGNVSLIETR  223 (703)
Q Consensus       199 ~~~~~~~v~~~~~spdg~~l~~~~~  223 (703)
                            .-.+.+|.|||+++..-+.
T Consensus       490 ------~DfsPaFD~d~ryLYfLs~  508 (668)
T COG4946         490 ------YDFSPAFDPDGRYLYFLSA  508 (668)
T ss_pred             ------cccCcccCCCCcEEEEEec
Confidence                  3346789999998776543

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=98.59  E-value=3.7e-06  Score=99.45  Aligned_cols=221  Identities=15%  Similarity=0.183  Sum_probs=146.4

Q ss_pred             CCcCeEEEEEcCCCCCCEEEEEeCCCcEEEE----EcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcC
Q psy7108          46 HEGPVSCIEFSPVLSSTGMVSASWDKTVKLW----NAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVE  121 (703)
Q Consensus        46 H~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iW----d~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~  121 (703)
                      ..+.|.++.+-+  +...++.+..+|.|.+.    +..+. .+..+-....+|.+++||||+..|+..+.++++.+.+ +
T Consensus        74 ~~~~ivs~~yl~--d~~~l~~~~~~Gdi~~~~~~~~~~~~-~~E~VG~vd~GI~a~~WSPD~Ella~vT~~~~l~~mt-~  149 (928)
T PF04762_consen   74 PNDKIVSFQYLA--DSESLCIALASGDIILVREDPDPDED-EIEIVGSVDSGILAASWSPDEELLALVTGEGNLLLMT-R  149 (928)
T ss_pred             CCCcEEEEEecc--CCCcEEEEECCceEEEEEccCCCCCc-eeEEEEEEcCcEEEEEECCCcCEEEEEeCCCEEEEEe-c
Confidence            356899999999  99999999999999888    44333 2333344778999999999999999999999988875 3


Q ss_pred             CCcEEEEEeccccCCC-------C-----------CCCC------cc--c---hhhcccCCccEEEEEEcCCCCEEEEEe
Q psy7108         122 SAAQVGSVEARRDLDS-------G-----------RLDT------DL--V---TREQSLKAKAVSTVCYSADGSCILAAG  172 (703)
Q Consensus       122 ~~~~~~~~~~~~~~~~-------~-----------~~~~------~~--~---~~~~~~~~~~V~~i~~spdg~~l~s~s  172 (703)
                      +.+.+....-+.+-.+       |           ..+.      +.  .   ....+ ....-..++|-.||+++|+.+
T Consensus       150 ~fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s-~dd~~~~ISWRGDG~yFAVss  228 (928)
T PF04762_consen  150 DFDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLS-WDDGRVRISWRGDGEYFAVSS  228 (928)
T ss_pred             cceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccc-cCCCceEEEECCCCcEEEEEE
Confidence            3444433322211100       0           0000      00  0   01111 333556899999999999865


Q ss_pred             c---C---CcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCC---CCCcc
Q psy7108         173 Q---S---KYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGV---KKGDM  243 (703)
Q Consensus       173 ~---d---g~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~---~~~~~  243 (703)
                      -   .   ..+++|+-+ |....+-+     ..++   --..++|.|.|..++..-...   ++..|.+|..   +-|+.
T Consensus       229 ~~~~~~~~R~iRVy~Re-G~L~stSE-----~v~g---Le~~l~WrPsG~lIA~~q~~~---~~~~VvFfErNGLrhgeF  296 (928)
T PF04762_consen  229 VEPETGSRRVIRVYSRE-GELQSTSE-----PVDG---LEGALSWRPSGNLIASSQRLP---DRHDVVFFERNGLRHGEF  296 (928)
T ss_pred             EEcCCCceeEEEEECCC-ceEEeccc-----cCCC---ccCCccCCCCCCEEEEEEEcC---CCcEEEEEecCCcEeeeE
Confidence            3   2   469999954 65544433     1222   234689999999888876532   2246777752   23333


Q ss_pred             ceeecCCccceEEEEEcCCCCEEEEEeCCCEEEEEcCCCc
Q psy7108         244 AARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYSLDSGY  283 (703)
Q Consensus       244 ~~~~~~h~~~V~~l~~spdg~~l~s~s~Dgv~iwd~~~~~  283 (703)
                      ..........|..+.|++|+..||....|.|.+|...+-.
T Consensus       297 ~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~vqLWt~~NYH  336 (928)
T PF04762_consen  297 TLRFDPEEEKVIELAWNSDSEILAVWLEDRVQLWTRSNYH  336 (928)
T ss_pred             ecCCCCCCceeeEEEECCCCCEEEEEecCCceEEEeeCCE
Confidence            3333345677999999999999999888889999887643

>KOG4532|consensus

Probab=98.59  E-value=3.3e-06  Score=81.18  Aligned_cols=192  Identities=10%  Similarity=0.013  Sum_probs=126.5

Q ss_pred             EEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCC-cEEEEEeccccCCCCCCC
Q psy7108          63 GMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESA-AQVGSVEARRDLDSGRLD  141 (703)
Q Consensus        63 ~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~-~~~~~~~~~~~~~~~~~~  141 (703)
                      -+.-++.|.++++.+++.+..........-.+.++++++|++++++.+....|..|.++.. +.+..+.....       
T Consensus       130 ~~~i~sndht~k~~~~~~~s~~~~~h~~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t-------  202 (344)
T KOG4532|consen  130 PLNIASNDHTGKTMVVSGDSNKFAVHNQNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPT-------  202 (344)
T ss_pred             ceeeccCCcceeEEEEecCcccceeeccccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEeccc-------
Confidence            4666788899999988655322222222123788999999999999999999999998654 22222111111       


Q ss_pred             CccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCE--EE
Q psy7108         142 TDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNV--SL  219 (703)
Q Consensus       142 ~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~--l~  219 (703)
                                 .+.-.+..|+.....+|++..||++.|||++...........   ..+.|...+..+.|++-|..  ++
T Consensus       203 -----------~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~ss---trp~hnGa~R~c~Fsl~g~lDLLf  268 (344)
T KOG4532|consen  203 -----------SDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEISS---TRPHHNGAFRVCRFSLYGLLDLLF  268 (344)
T ss_pred             -----------CCCceeeeeccCcceEEEEecCCcEEEEEecccccchhhhcc---cCCCCCCceEEEEecCCCcceEEE
Confidence                       113457889999999999999999999999975433322222   22336779999999987753  34


Q ss_pred             EEcccCCCCCeeEEECCCCCCCccceeecC-------Cc-cceEEEEEcCCCCEEEEEeCCCEEEEEcCC
Q psy7108         220 IETRETHEGGNVVLKLPGVKKGDMAARVLK-------PE-VRVFCVKFSPTGQAWVAATTEGVHIYSLDS  281 (703)
Q Consensus       220 ~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~-------h~-~~V~~l~~spdg~~l~s~s~Dgv~iwd~~~  281 (703)
                      ++-..      ..+.+-|++++...+.+..       |. ..|..-.|+.++....+.+++.+.=|+..+
T Consensus       269 ~sEhf------s~~hv~D~R~~~~~q~I~i~~d~~~~~~tq~ifgt~f~~~n~s~~v~~e~~~ae~ni~s  332 (344)
T KOG4532|consen  269 ISEHF------SRVHVVDTRNYVNHQVIVIPDDVERKHNTQHIFGTNFNNENESNDVKNELQGAEYNILS  332 (344)
T ss_pred             EecCc------ceEEEEEcccCceeeEEecCccccccccccccccccccCCCcccccccchhhheeeccc
Confidence            43322      3788889888865554433       22 226667777777766666666555555543

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=98.57  E-value=2e-05  Score=95.11  Aligned_cols=257  Identities=12%  Similarity=0.086  Sum_probs=154.1

Q ss_pred             EEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEec-C-------------CCcEEEEEEecCCCEEEEEEC-CCeE
Q psy7108          51 SCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQ-L-------------LSDALCVAYKPDGTEIVVATL-DGQL  115 (703)
Q Consensus        51 ~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~-~-------------~~~V~~v~~spdg~~las~s~-dg~I  115 (703)
                      ..+++++. ++.++++-+.++.|++||.... .....-. .             -.....+++++++..|+++.. ++.|
T Consensus       571 ~gvavd~~-~g~lyVaDs~n~rI~v~d~~G~-~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~I  648 (1057)
T PLN02919        571 GKLAIDLL-NNRLFISDSNHNRIVVTDLDGN-FIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHAL  648 (1057)
T ss_pred             ceEEEECC-CCeEEEEECCCCeEEEEeCCCC-EEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCceE
Confidence            46788872 4567777778889999997543 3322221 1             123578999999887766654 5679


Q ss_pred             EEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC-CCCEEEEEecCCcEEEEECCCCceEEEEEec
Q psy7108         116 IMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA-DGSCILAAGQSKYICIYSSREGILLKKFTIT  194 (703)
Q Consensus       116 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp-dg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~  194 (703)
                      +++|..++. +.++.+... ......... .. ....-..-+.++++| ++..+++.+.++.|++||..++... .+.+.
T Consensus       649 r~id~~~~~-V~tlag~G~-~g~~~~gg~-~~-~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~-~~~G~  723 (1057)
T PLN02919        649 REIDFVNET-VRTLAGNGT-KGSDYQGGK-KG-TSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTR-VFSGD  723 (1057)
T ss_pred             EEEecCCCE-EEEEeccCc-ccCCCCCCh-hh-hHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEE-EEecC
Confidence            999987764 444433110 000000000 00 000011335799999 5556666677889999999877543 33221


Q ss_pred             cC-Ccc------ccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceee-------------cCC----
Q psy7108         195 QN-KSL------DGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARV-------------LKP----  250 (703)
Q Consensus       195 ~~-~~~------~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~-------------~~h----  250 (703)
                      .. ...      .........++++|+|+.++++....     ..|++||+.++......             ...    
T Consensus       724 G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n-----~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g  798 (1057)
T PLN02919        724 GYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSES-----SSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVG  798 (1057)
T ss_pred             CccccCCCCccccccccCccEEEEeCCCCEEEEEECCC-----CeEEEEECCCCcEEEEEecccccCcccccccCCCCch
Confidence            10 000      01113456799999999766655432     48999998765421110             000    


Q ss_pred             ----ccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecc-------------------eeeeEEEccchhhhHhhcC
Q psy7108         251 ----EVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDP-------------------FLLDISITPQSVKEALADK  306 (703)
Q Consensus       251 ----~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~-------------------~~~~~~~spd~~~~~l~sg  306 (703)
                          -....+++++++|+.+++-+.++ |++||..++.....                   ....+++++++  .++.+.
T Consensus       799 ~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG--~lyVaD  876 (1057)
T PLN02919        799 SEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENG--RLFVAD  876 (1057)
T ss_pred             hhhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCC--CEEEEE
Confidence                11346899999999777777777 99999987654311                   12457888888  556666


Q ss_pred             CcceEEEEEEecCchh
Q psy7108         307 DYAKALMMSLKLNEQG  322 (703)
Q Consensus       307 ~~~~~l~la~~l~~~~  322 (703)
                      .....+++ |+++...
T Consensus       877 t~Nn~Irv-id~~~~~  891 (1057)
T PLN02919        877 TNNSLIRY-LDLNKGE  891 (1057)
T ss_pred             CCCCEEEE-EECCCCc
Confidence            67778877 7776543

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=98.56  E-value=2.2e-05  Score=82.14  Aligned_cols=229  Identities=10%  Similarity=0.018  Sum_probs=138.6

Q ss_pred             CcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEEC----------CCeEEEEEcCCCcEEEEEeccccCCCCCC
Q psy7108          71 KTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATL----------DGQLIMFDVESAAQVGSVEARRDLDSGRL  140 (703)
Q Consensus        71 g~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~----------dg~I~vwd~~~~~~~~~~~~~~~~~~~~~  140 (703)
                      ++|.+.|..+.+....+... .....+ +||||+.++++..          +..|.+||..+.+.+..+.......    
T Consensus        27 ~~v~ViD~~~~~v~g~i~~G-~~P~~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~----  100 (352)
T TIGR02658        27 TQVYTIDGEAGRVLGMTDGG-FLPNPV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPR----  100 (352)
T ss_pred             ceEEEEECCCCEEEEEEEcc-CCCcee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCch----
Confidence            78999999887544444332 233334 9999998877765          6789999999999998887532200    


Q ss_pred             CCccchhhcccCCccEEEEEEcCCCCEEEEEe-c-CCcEEEEECCCCceEEEEEeccCCc-------------ccccc--
Q psy7108         141 DTDLVTREQSLKAKAVSTVCYSADGSCILAAG-Q-SKYICIYSSREGILLKKFTITQNKS-------------LDGIN--  203 (703)
Q Consensus       141 ~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s-~-dg~I~lwD~~~~~~~~~~~~~~~~~-------------~~~~~--  203 (703)
                               ......-..++++|||++|++.. . +..|.+.|+.+++.+..+..+.+..             .++-.  
T Consensus       101 ---------~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~~~~vy~t~e~~~~~~~~Dg~~~~  171 (352)
T TIGR02658       101 ---------FLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPDCYHIFPTANDTFFMHCRDGSLAK  171 (352)
T ss_pred             ---------hhccCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCCCcEEEEecCCccEEEeecCceEE
Confidence                     00011345788999999999876 3 6889999999998887765433210             00000  


Q ss_pred             -------------ccc---------eeeeecc-CCCEEEEEcccCCCCCeeEEECCCCCCC-----ccceeecC------
Q psy7108         204 -------------DFI---------NRRKMTE-FGNVSLIETRETHEGGNVVLKLPGVKKG-----DMAARVLK------  249 (703)
Q Consensus       204 -------------~~v---------~~~~~sp-dg~~l~~~~~~~~~~~~~~i~iwd~~~~-----~~~~~~~~------  249 (703)
                                   ..+         ....+++ +|+.++++.. |      .|.+-|+...     +....+..      
T Consensus       172 v~~d~~g~~~~~~~~vf~~~~~~v~~rP~~~~~dg~~~~vs~e-G------~V~~id~~~~~~~~~~~~~~~~~~~~~~~  244 (352)
T TIGR02658       172 VGYGTKGNPKIKPTEVFHPEDEYLINHPAYSNKSGRLVWPTYT-G------KIFQIDLSSGDAKFLPAIEAFTEAEKADG  244 (352)
T ss_pred             EEecCCCceEEeeeeeecCCccccccCCceEcCCCcEEEEecC-C------eEEEEecCCCcceecceeeeccccccccc
Confidence                         000         0012233 6666655554 2      5666664322     11111110      


Q ss_pred             -CccceEEEEEcCCCCEEEEEe----------CCC-EEEEEcCCCceeccee-----eeEEEccchhhhHhhcCCcceEE
Q psy7108         250 -PEVRVFCVKFSPTGQAWVAAT----------TEG-VHIYSLDSGYVFDPFL-----LDISITPQSVKEALADKDYAKAL  312 (703)
Q Consensus       250 -h~~~V~~l~~spdg~~l~s~s----------~Dg-v~iwd~~~~~~~~~~~-----~~~~~spd~~~~~l~sg~~~~~l  312 (703)
                       ..+...-++++|+++.+.+..          ..+ |.++|..+++....+.     ..++++||+.-.+..+....+.+
T Consensus       245 wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~vG~~~~~iavS~Dgkp~lyvtn~~s~~V  324 (352)
T TIGR02658       245 WRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIELGHEIDSINVSQDAKPLLYALSTGDKTL  324 (352)
T ss_pred             cCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeCCCceeeEEECCCCCeEEEEeCCCCCcE
Confidence             122334499999999987643          113 8899999988866543     67999999941223333344555


Q ss_pred             EEEEecCchh
Q psy7108         313 MMSLKLNEQG  322 (703)
Q Consensus       313 ~la~~l~~~~  322 (703)
                      .+ ++....+
T Consensus       325 sV-iD~~t~k  333 (352)
T TIGR02658       325 YI-FDAETGK  333 (352)
T ss_pred             EE-EECcCCe
Confidence            55 5554443

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=98.54  E-value=6.8e-05  Score=75.77  Aligned_cols=212  Identities=12%  Similarity=0.169  Sum_probs=140.3

Q ss_pred             EEEEEcCCCCCCEEEEEeCCCc-EEEEEcCCCceeEEEecCCCcEE--EEEEecCCCEEEEEEC-----CCeEEEEEcC-
Q psy7108          51 SCIEFSPVLSSTGMVSASWDKT-VKLWNAVETDTQHETIQLLSDAL--CVAYKPDGTEIVVATL-----DGQLIMFDVE-  121 (703)
Q Consensus        51 ~~l~~sp~~dg~~L~sgs~Dg~-V~iWd~~~~~~~~~~~~~~~~V~--~v~~spdg~~las~s~-----dg~I~vwd~~-  121 (703)
                      ..++.+|. .+..++.+-.-|+ ..+||..+++....+....+.-.  -.+||+||++|++.-.     .|.|-|||.. 
T Consensus         8 H~~a~~p~-~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~   86 (305)
T PF07433_consen    8 HGVAAHPT-RPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAAR   86 (305)
T ss_pred             cceeeCCC-CCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcC
Confidence            35677883 5566677766665 47899988876655544444333  2789999999988644     4789999998 


Q ss_pred             CCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec------------------CCcEEEEECC
Q psy7108         122 SAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ------------------SKYICIYSSR  183 (703)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~------------------dg~I~lwD~~  183 (703)
                      +-+.+..+..+--                    .-..+.+.|||+.|+++..                  +.++...|..
T Consensus        87 ~~~ri~E~~s~GI--------------------GPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~  146 (305)
T PF07433_consen   87 GYRRIGEFPSHGI--------------------GPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDAR  146 (305)
T ss_pred             CcEEEeEecCCCc--------------------ChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecC
Confidence            5566666665432                    4456889999988887531                  2356667777


Q ss_pred             CCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCC-CeeEEECCCCCCCccceeec-------CCccceE
Q psy7108         184 EGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEG-GNVVLKLPGVKKGDMAARVL-------KPEVRVF  255 (703)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~-~~~~i~iwd~~~~~~~~~~~-------~h~~~V~  255 (703)
                      +|+.+.....+.    +-+.-.+..+++.++|...+..-..+... ..-.+-+++..  +....+.       ....-+-
T Consensus       147 sG~ll~q~~Lp~----~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g--~~~~~~~~p~~~~~~l~~Y~g  220 (305)
T PF07433_consen  147 SGALLEQVELPP----DLHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRG--GALRLLPAPEEQWRRLNGYIG  220 (305)
T ss_pred             CCceeeeeecCc----cccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcCC--CcceeccCChHHHHhhCCceE
Confidence            887776655322    12344789999999998766544433211 11233344322  2222222       2345689


Q ss_pred             EEEEcCCCCEEEEEeCCC--EEEEEcCCCceeccee
Q psy7108         256 CVKFSPTGQAWVAATTEG--VHIYSLDSGYVFDPFL  289 (703)
Q Consensus       256 ~l~~spdg~~l~s~s~Dg--v~iwd~~~~~~~~~~~  289 (703)
                      +|++++++..+++.+-.|  +.+||..+++.+....
T Consensus       221 SIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~~~~~~  256 (305)
T PF07433_consen  221 SIAADRDGRLIAVTSPRGGRVAVWDAATGRLLGSVP  256 (305)
T ss_pred             EEEEeCCCCEEEEECCCCCEEEEEECCCCCEeeccc
Confidence            999999999997777766  8999999999876654

>KOG1064|consensus

Probab=98.51  E-value=7.6e-07  Score=104.60  Aligned_cols=221  Identities=10%  Similarity=0.120  Sum_probs=156.2

Q ss_pred             EEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCc
Q psy7108          64 MVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTD  143 (703)
Q Consensus        64 L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~  143 (703)
                      +.....++...-|..+..  -.....+-..|.++.=+|...+-++|+.||.|++|.-..++.+..++....         
T Consensus      2183 ~~~~n~~~~~~tq~~~~~--~~~~k~~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~--------- 2251 (2439)
T KOG1064|consen 2183 FTPSNLPWLGSTQTSRGA--SVMIKHPVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGN--------- 2251 (2439)
T ss_pred             CCcccCCccccceecccc--eeEeecccCceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCc---------
Confidence            333333444444543322  123334556788888899999999999999999999988888877764321         


Q ss_pred             cchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcc
Q psy7108         144 LVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETR  223 (703)
Q Consensus       144 ~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~  223 (703)
                                ..|+.+.|+.+|+.+..+..||.+.+|... .++....+        +|......+.|-.  ..++.++.
T Consensus      2252 ----------s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~-pk~~~s~q--------chnk~~~Df~Fi~--s~~~tag~ 2310 (2439)
T KOG1064|consen 2252 ----------SRVTRSRFNHQGNKFGIVDGDGDLSLWQAS-PKPYTSWQ--------CHNKALSDFRFIG--SLLATAGR 2310 (2439)
T ss_pred             ----------chhhhhhhcccCCceeeeccCCceeecccC-Ccceeccc--------cCCccccceeeee--hhhhcccc
Confidence                      378999999999999999999999999987 33333332        3333555556554  33344333


Q ss_pred             cCCCCCeeEEECCCCCCC-ccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecceeeeEEEccchhhh
Q psy7108         224 ETHEGGNVVLKLPGVKKG-DMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPFLLDISITPQSVKE  301 (703)
Q Consensus       224 ~~~~~~~~~i~iwd~~~~-~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~~~~~~~spd~~~~  301 (703)
                      .. +  ++.+.+||.-.. ..-..-..|.+.++++++-|..+.|++|+.+| |++||+...+....++.   +  + .+.
T Consensus      2311 s~-d--~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql~h~~~~---~--~-~~~ 2381 (2439)
T KOG1064|consen 2311 SS-D--NRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLRHTFQA---L--D-TRE 2381 (2439)
T ss_pred             CC-C--CCcccchhcccCcccceeeeecCCCceEEEEcCcceEEEecCCcCcEEEeehHHHHHHHHhhh---h--h-hhh
Confidence            22 2  257999996532 11122267999999999999999999999999 99999988777665553   2  2 347


Q ss_pred             HhhcCCcceEEEEEEecCchhHHHH
Q psy7108         302 ALADKDYAKALMMSLKLNEQGLIIH  326 (703)
Q Consensus       302 ~l~sg~~~~~l~la~~l~~~~~~~~  326 (703)
                      ++.+|+..+.+++ |+++++.++..
T Consensus      2382 ~f~~~ss~g~ikI-w~~s~~~ll~~ 2405 (2439)
T KOG1064|consen 2382 YFVTGSSEGNIKI-WRLSEFGLLHT 2405 (2439)
T ss_pred             eeeccCcccceEE-EEccccchhhc
Confidence            8889999999999 99998855543

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=98.48  E-value=2.3e-07  Score=64.15  Aligned_cols=39  Identities=26%  Similarity=0.625  Sum_probs=36.3

Q ss_pred             CCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEE
Q psy7108          35 ARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWN   77 (703)
Q Consensus        35 g~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd   77 (703)
                      |+++  +++.+|.++|++++|+|  ++.+|+||+.|++|++||
T Consensus         1 g~~~--~~~~~h~~~i~~i~~~~--~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    1 GKCV--RTFRGHSSSINSIAWSP--DGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEE--EEEESSSSSEEEEEEET--TSSEEEEEETTSEEEEEE
T ss_pred             CeEE--EEEcCCCCcEEEEEEec--ccccceeeCCCCEEEEEC
Confidence            3566  89999999999999999  999999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=98.45  E-value=5.2e-05  Score=74.40  Aligned_cols=214  Identities=13%  Similarity=0.119  Sum_probs=125.3

Q ss_pred             EEEcCCCCCCEEEEEeCCCcEEEEEcCCCc--eeEEEe--c-CCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEE
Q psy7108          53 IEFSPVLSSTGMVSASWDKTVKLWNAVETD--TQHETI--Q-LLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVG  127 (703)
Q Consensus        53 l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~--~~~~~~--~-~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~  127 (703)
                      ++.+.  +|+.||.- .|..|.|-..++.-  .+....  . ..-.-+-++||||+..||.+...|+|+++|+.. ..+.
T Consensus         3 ~~~~~--~Gk~lAi~-qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g-~~lf   78 (282)
T PF15492_consen    3 LALSS--DGKLLAIL-QDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMG-SELF   78 (282)
T ss_pred             eeecC--CCcEEEEE-eccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEeccc-ceeE
Confidence            45566  78777765 45566665544321  111111  1 222356799999999999999999999999975 4444


Q ss_pred             EEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC------CCEEEEEecCCcEEEEECCC-----CceEEEEEeccC
Q psy7108         128 SVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD------GSCILAAGQSKYICIYSSRE-----GILLKKFTITQN  196 (703)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd------g~~l~s~s~dg~I~lwD~~~-----~~~~~~~~~~~~  196 (703)
                      .+.......+             .-...|..+.|.+-      ...|++-..+|.++-|-+..     .+....|.....
T Consensus        79 ~I~p~~~~~~-------------d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~  145 (282)
T PF15492_consen   79 VIPPAMSFPG-------------DLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSH  145 (282)
T ss_pred             EcCcccccCC-------------ccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEeccc
Confidence            4444321100             01235666666442      12455556667776666532     223333332211


Q ss_pred             CccccccccceeeeeccCCCEEEEEcccCCCCCe-----eEEECCCCCCCcc-----------c---------ee-----
Q psy7108         197 KSLDGINDFINRRKMTEFGNVSLIETRETHEGGN-----VVLKLPGVKKGDM-----------A---------AR-----  246 (703)
Q Consensus       197 ~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~-----~~i~iwd~~~~~~-----------~---------~~-----  246 (703)
                           ....|+++.++|..+.+++++....+.+.     .-+.-|.+-.+.+           +         .+     
T Consensus       146 -----yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~  220 (282)
T PF15492_consen  146 -----YPHGINSAVYHPKHRLLLVGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFK  220 (282)
T ss_pred             -----CCCceeEEEEcCCCCEEEEeccCCCCCccccccccCceEEEEcCCCCcEEEccccCccccccccccceeecccee
Confidence                 23478899999999988887765433211     0122232111100           0         00     


Q ss_pred             ----ecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecce
Q psy7108         247 ----VLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPF  288 (703)
Q Consensus       247 ----~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~  288 (703)
                          .......|..+..||||+.||+...+| +.+|++++-.....+
T Consensus       221 ~fs~~~~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W  267 (282)
T PF15492_consen  221 FFSRQGQEQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSW  267 (282)
T ss_pred             eeeccccCCCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhccc
Confidence                012355688999999999999999999 999999876655443

>KOG2315|consensus

Probab=98.44  E-value=4e-06  Score=88.48  Aligned_cols=174  Identities=18%  Similarity=0.218  Sum_probs=117.7

Q ss_pred             EEEEEcCCCCCC-EEEEEe--CCC---------cEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEE--EECCCeEE
Q psy7108          51 SCIEFSPVLSST-GMVSAS--WDK---------TVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVV--ATLDGQLI  116 (703)
Q Consensus        51 ~~l~~sp~~dg~-~L~sgs--~Dg---------~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las--~s~dg~I~  116 (703)
                      -.+.|++  -|+ +|+.++  -|+         ++.+.+++ +..+.....-.++|.++.|+|+|+.+++  |-.=..+.
T Consensus       221 vqm~WN~--~gt~LLvLastdVDktn~SYYGEq~Lyll~t~-g~s~~V~L~k~GPVhdv~W~~s~~EF~VvyGfMPAkvt  297 (566)
T KOG2315|consen  221 VQMKWNK--LGTALLVLASTDVDKTNASYYGEQTLYLLATQ-GESVSVPLLKEGPVHDVTWSPSGREFAVVYGFMPAKVT  297 (566)
T ss_pred             eEEEecc--CCceEEEEEEEeecCCCccccccceEEEEEec-CceEEEecCCCCCceEEEECCCCCEEEEEEecccceEE
Confidence            4578888  454 333332  232         56777765 4444555567899999999999987655  44456899


Q ss_pred             EEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec---CCcEEEEECCCCceEEEEEe
Q psy7108         117 MFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ---SKYICIYSSREGILLKKFTI  193 (703)
Q Consensus       117 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~---dg~I~lwD~~~~~~~~~~~~  193 (703)
                      ++|++. ..+..+..                      ++-+++-|+|.|++|+.++-   .|.+-+||+.+.+++.++..
T Consensus       298 ifnlr~-~~v~df~e----------------------gpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a  354 (566)
T KOG2315|consen  298 IFNLRG-KPVFDFPE----------------------GPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKA  354 (566)
T ss_pred             EEcCCC-CEeEeCCC----------------------CCccceEECCCCCEEEEeecCCCCCceEEEeccchhhcccccc
Confidence            999874 44443332                      24578999999999998764   47899999999888877764


Q ss_pred             ccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCC
Q psy7108         194 TQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPT  262 (703)
Q Consensus       194 ~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spd  262 (703)
                      ..          -+-+.|+|||+++++++..-.-.-++.++||+.. |..+....- ....+.+.|-|-
T Consensus       355 ~~----------tt~~eW~PdGe~flTATTaPRlrvdNg~Kiwhyt-G~~l~~~~f-~sEL~qv~W~P~  411 (566)
T KOG2315|consen  355 AN----------TTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYT-GSLLHEKMF-KSELLQVEWRPF  411 (566)
T ss_pred             CC----------ceEEEEcCCCcEEEEEeccccEEecCCeEEEEec-Cceeehhhh-hHhHhheeeeec
Confidence            33          3567899999999998876433334568999864 333322111 114667778764

>KOG0280|consensus

Probab=98.44  E-value=1e-05  Score=78.98  Aligned_cols=202  Identities=11%  Similarity=0.090  Sum_probs=134.8

Q ss_pred             CcCeEEEEEcCC-CCCC-EEEEEeCCCcEEEEEcCCCceeEEEecCC------CcEEEEEEecCCCEEEEEECCCeEEEE
Q psy7108          47 EGPVSCIEFSPV-LSST-GMVSASWDKTVKLWNAVETDTQHETIQLL------SDALCVAYKPDGTEIVVATLDGQLIMF  118 (703)
Q Consensus        47 ~~~V~~l~~sp~-~dg~-~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~------~~V~~v~~spdg~~las~s~dg~I~vw  118 (703)
                      +..+..+.|+.. .+|+ .++-+..+|.|.++..........+.+..      ....++.|++.+..++++..+|.+.+-
T Consensus        69 ts~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~~~~v  148 (339)
T KOG0280|consen   69 TSTEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVEALSLDISTSGTKIFVSDSRGSISGV  148 (339)
T ss_pred             ccccceeeeeeccCCccceeeeccccceEEEEeeccceeeeeecccchhhhhheeeeEEEeeccCceEEEEcCCCcEEEE
Confidence            456777777642 1455 55667778999998765543322222211      124678899999999999999999866


Q ss_pred             EcCCCcEE--EEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC-CCCEEEEEecCCcEEEEECCC-CceEEEEEec
Q psy7108         119 DVESAAQV--GSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA-DGSCILAAGQSKYICIYSSRE-GILLKKFTIT  194 (703)
Q Consensus       119 d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp-dg~~l~s~s~dg~I~lwD~~~-~~~~~~~~~~  194 (703)
                      +.......  +.++.|.-                    ..+...|+. +.+.+.+|+.|+.+..||+|. ++.+-.  . 
T Consensus       149 ~~t~~~le~vq~wk~He~--------------------E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~--n-  205 (339)
T KOG0280|consen  149 YETEMVLEKVQTWKVHEF--------------------EAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWH--N-  205 (339)
T ss_pred             ecceeeeeecccccccce--------------------eeeeeecccCCCceEEecCCCceEEEEEecCCcceeee--c-
Confidence            65544333  35666554                    788888876 446788999999999999993 322221  1 


Q ss_pred             cCCccccccccceeeeeccC-CCEEEEEcccCCCCCeeEEECCCCCC-CccceeecCCccceEEEEEcCCC--CEEEEEe
Q psy7108         195 QNKSLDGINDFINRRKMTEF-GNVSLIETRETHEGGNVVLKLPGVKK-GDMAARVLKPEVRVFCVKFSPTG--QAWVAAT  270 (703)
Q Consensus       195 ~~~~~~~~~~~v~~~~~spd-g~~l~~~~~~~~~~~~~~i~iwd~~~-~~~~~~~~~h~~~V~~l~~spdg--~~l~s~s  270 (703)
                          ..-|...|.++.-+|. +.++++++.++      .+++||.++ ++++... .-.+.|+.+.++|.-  +.|+++-
T Consensus       206 ----~kvH~~GV~SI~ss~~~~~~I~TGsYDe------~i~~~DtRnm~kPl~~~-~v~GGVWRi~~~p~~~~~lL~~CM  274 (339)
T KOG0280|consen  206 ----SKVHTSGVVSIYSSPPKPTYIATGSYDE------CIRVLDTRNMGKPLFKA-KVGGGVWRIKHHPEIFHRLLAACM  274 (339)
T ss_pred             ----ceeeecceEEEecCCCCCceEEEecccc------ceeeeehhcccCccccC-ccccceEEEEecchhhhHHHHHHH
Confidence                1124457888877765 55666666653      799999984 5554332 334789999999964  4567777


Q ss_pred             CCCEEEEEcCCC
Q psy7108         271 TEGVHIYSLDSG  282 (703)
Q Consensus       271 ~Dgv~iwd~~~~  282 (703)
                      .+|.+|-+...+
T Consensus       275 h~G~ki~~~~~~  286 (339)
T KOG0280|consen  275 HNGAKILDSSDK  286 (339)
T ss_pred             hcCceEEEeccc
Confidence            888777776544

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=98.44  E-value=2.2e-05  Score=93.01  Aligned_cols=200  Identities=16%  Similarity=0.241  Sum_probs=131.4

Q ss_pred             CCcEEEEEEecCCCEEEEEECCCeEEEE----EcCCC--cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC
Q psy7108          91 LSDALCVAYKPDGTEIVVATLDGQLIMF----DVESA--AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD  164 (703)
Q Consensus        91 ~~~V~~v~~spdg~~las~s~dg~I~vw----d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd  164 (703)
                      .+.|.++.+-++...++.+..+|.|.+.    +..+.  +.+..++.                       .|.+++||||
T Consensus        75 ~~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~~~~E~VG~vd~-----------------------GI~a~~WSPD  131 (928)
T PF04762_consen   75 NDKIVSFQYLADSESLCIALASGDIILVREDPDPDEDEIEIVGSVDS-----------------------GILAASWSPD  131 (928)
T ss_pred             CCcEEEEEeccCCCcEEEEECCceEEEEEccCCCCCceeEEEEEEcC-----------------------cEEEEEECCC
Confidence            4679999999999999999999999999    54443  33444433                       7999999999


Q ss_pred             CCEEEEEecCCcEEEEECCCCceEEE------------------------EEeccCCc-----------------ccccc
Q psy7108         165 GSCILAAGQSKYICIYSSREGILLKK------------------------FTITQNKS-----------------LDGIN  203 (703)
Q Consensus       165 g~~l~s~s~dg~I~lwD~~~~~~~~~------------------------~~~~~~~~-----------------~~~~~  203 (703)
                      +..|+..+.++++.+.+ ++..++..                        |.+..+..                 +. ..
T Consensus       132 ~Ella~vT~~~~l~~mt-~~fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s-~d  209 (928)
T PF04762_consen  132 EELLALVTGEGNLLLMT-RDFDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLS-WD  209 (928)
T ss_pred             cCEEEEEeCCCEEEEEe-ccceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccc-cC
Confidence            99999999998887764 32332222                        11111110                 11 23


Q ss_pred             ccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeC--CC--EEEEEc
Q psy7108         204 DFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATT--EG--VHIYSL  279 (703)
Q Consensus       204 ~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~--Dg--v~iwd~  279 (703)
                      +.-..++|-.||+++++++-+...+..+.+++|+.. |........-.+--.+++|.|.|+++|+...  +.  |.+|..
T Consensus       210 d~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfEr  288 (928)
T PF04762_consen  210 DGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFER  288 (928)
T ss_pred             CCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ceEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEec
Confidence            355678999999999998864323336899999965 6544444433344457899999999988775  22  666764


Q ss_pred             CCCceecce----------eeeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108         280 DSGYVFDPF----------LLDISITPQSVKEALADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       280 ~~~~~~~~~----------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~  321 (703)
                      + |..+..|          ...+.|++|+  ..|+.--.+ .+.+ |..+++
T Consensus       289 N-GLrhgeF~l~~~~~~~~v~~l~Wn~ds--~iLAv~~~~-~vqL-Wt~~NY  335 (928)
T PF04762_consen  289 N-GLRHGEFTLRFDPEEEKVIELAWNSDS--EILAVWLED-RVQL-WTRSNY  335 (928)
T ss_pred             C-CcEeeeEecCCCCCCceeeEEEECCCC--CEEEEEecC-CceE-EEeeCC
Confidence            3 4443333          3568899988  555542222 2444 554433

>KOG2695|consensus

Probab=98.41  E-value=1.4e-06  Score=86.52  Aligned_cols=177  Identities=14%  Similarity=0.160  Sum_probs=121.0

Q ss_pred             EEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccc
Q psy7108          54 EFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARR  133 (703)
Q Consensus        54 ~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~  133 (703)
                      +|+-+..+-. ++.+.+-.|-+-|++++  ..+.+..++.|.+..|...+..+..|+.+|.|..+|++++.+-.      
T Consensus       218 awSlni~gyh-fs~G~sqqv~L~nvetg--~~qsf~sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~------  288 (425)
T KOG2695|consen  218 AWSLNIMGYH-FSVGLSQQVLLTNVETG--HQQSFQSKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGN------  288 (425)
T ss_pred             hhhhccceee-ecccccceeEEEEeecc--cccccccchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCC------
Confidence            5654212334 55556667788888877  34445578899999999989999999999999999998762110      


Q ss_pred             cCCCCCCCCccchhhcccCCccEEEEEEcC-CCCEEEEEecCCcEEEEECCCCce---EEEEEeccCCccccccccceee
Q psy7108         134 DLDSGRLDTDLVTREQSLKAKAVSTVCYSA-DGSCILAAGQSKYICIYSSREGIL---LKKFTITQNKSLDGINDFINRR  209 (703)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp-dg~~l~s~s~dg~I~lwD~~~~~~---~~~~~~~~~~~~~~~~~~v~~~  209 (703)
                                .+.....-|...|+++..-. ++++|++.+.+|+|++||++.-++   +.++++|.+..      .-.-+
T Consensus       289 ----------~~~a~rlyh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~------a~l~~  352 (425)
T KOG2695|consen  289 ----------GWCAQRLYHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLS------AYLPA  352 (425)
T ss_pred             ----------CcceEEEEcCcchhhhhhhccccceEeeccCcCceeEeeehhhhcccceeeeecccccc------ccccc
Confidence                      11111122344788887766 788999999999999999998777   88888877621      11123


Q ss_pred             eeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCC----ccceEEEEEcC
Q psy7108         210 KMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKP----EVRVFCVKFSP  261 (703)
Q Consensus       210 ~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h----~~~V~~l~~sp  261 (703)
                      -+.+....+++++.+      ...++|.++.|+.+.++.-.    +..+.+++|+.
T Consensus       353 ~v~~eeg~I~s~GdD------cytRiWsl~~ghLl~tipf~~s~~e~d~~sv~~~s  402 (425)
T KOG2695|consen  353 HVKEEEGSIFSVGDD------CYTRIWSLDSGHLLCTIPFPYSASEVDIPSVAFDS  402 (425)
T ss_pred             ccccccceEEEccCe------eEEEEEecccCceeeccCCCCccccccccceehhc
Confidence            345555555554433      68999999999887766533    34566676643

>PF04003 Utp12: Dip2/Utp12 Family; InterPro: IPR007148 A large ribonuclear protein complex is required for the processing of the small-ribosomal-subunit rRNA - the small-subunit (SSU) processome [, ]

Probab=98.40  E-value=9.5e-07  Score=77.11  Aligned_cols=100  Identities=34%  Similarity=0.547  Sum_probs=88.6

Q ss_pred             CchhHHHHHhhccCcchHHHHHhhccHHHHHHHHHHHHHHHh--cCCChHHHHHHHHHHHHH----cCCC-chh--hHHH
Q psy7108         319 NEQGLIIHVLENIRTRDIALTVRSLAEIYLEKLLKFIAAMLE--VSKHIEFYVSWVSQILMV----LKSP-SQT--TLVH  389 (703)
Q Consensus       319 ~~~~~~~~v~~~~~~~~i~~~~~~l~~~~~~~ll~~~~~~~~--~~~~~e~~~~~l~~~l~~----l~~~-~~~--~l~~  389 (703)
                      |+...+.++++.+|.+.|+.++..+|..++.++|+++..++.  ++.+.|++..|+..++..    +... ...  .+..
T Consensus         1 Nd~~ll~~vl~~~~~~~I~~tv~~Lp~~~~~~LL~~l~~~l~~~~~~~~e~~l~Wl~~ll~~H~~~l~~~~~~~~~~L~~   80 (110)
T PF04003_consen    1 NDEELLLEVLERIPPSDIENTVRSLPFSYAERLLQFLSERLQTRKSPHVEFLLRWLKALLKTHGSYLSSSSPELRPVLRS   80 (110)
T ss_pred             CHHHHHHHHHhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence            467788999999999999999999999999999999999775  788999999999999999    5555 333  9999


Q ss_pred             HHHHHHHHHhhhhceecccCCCcccchhhhhh
Q psy7108         390 LQRNLNKKYSDLAKISCQFDDTKFLPPTLFAR  421 (703)
Q Consensus       390 L~~~l~~~~~~~~~l~~~~n~~~~sl~~~la~  421 (703)
                      |++.++++.+.+.++ +..|  ...|+|+.+.
T Consensus        81 L~~~l~~~~~~l~~l-~~~n--~~~L~~l~~q  109 (110)
T PF04003_consen   81 LQKILRERLQNLSKL-LDLN--LGRLDYLLSQ  109 (110)
T ss_pred             HHHHHHHHHHHHHHH-HHHh--HHHHHHHHHh
Confidence            999999999999999 8888  7888888774

This preribosomal complex contains the U3 snoRNA and at least 40 proteins, which have the following properties: They are nucleolar. They are able to coimmunoprecipitate with the U3 snoRNA and Mpp10 (a protein specific to the SSU processome). They are required for 18S rRNA biogenesis. There appears to be a linkage between polymerase I transcription and the formation of the SSU processome; as some, but not all, of the SSU processome components are required for pre-rRNA transcription initiation. These SSU processome components have been termed t-Utps. They form a pre-complex with pre-18S rRNA in the absence of snoRNA U3 and other SSU processome components. It has been proposed that the t-Utp complex proteins are both rDNA and rRNA binding proteins that are involved in the initiation of pre18S rRNA transcription. Initially binding to rDNA then associating with the 5' end of the nascent pre18S rRNA. The t-Utpcomplex forms the nucleus around which the rest of the SSU processome components, including snoRNA U3, assemble []. From electron microscopy the SSU processome may correspond to the terminal knobs visualized at the 5' ends of nascent 18S rRNA. This domain is found at the C terminus of proteins containing WD40 repeats. These proteins are part of the U3 ribonucleoprotein. In yeast, these proteins are called Utp5, Utp1 or Pwp2, Utp12 or DIP2 Q12220 from SWISSPROT. They interact with snoRNA U3 and with MPP10 []. Pwp2 is an essential Saccharomyces cerevisiae (Baker's yeast) protein involved in cell separation.

>KOG2041|consensus

Probab=98.40  E-value=1.8e-06  Score=92.83  Aligned_cols=197  Identities=14%  Similarity=0.165  Sum_probs=131.8

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEec--CCCcEEEEEEecCCCEEEEEECCCeEEEE
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQ--LLSDALCVAYKPDGTEIVVATLDGQLIMF  118 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~--~~~~V~~v~~spdg~~las~s~dg~I~vw  118 (703)
                      ++|.||.+.|..+.|+.  ..+.|-|...+|.|.+|-+..+.-..+...  .++-|.+++|..||+.++..-.||.|.|=
T Consensus        65 QtLeGH~~sV~vvTWNe--~~QKLTtSDt~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVG  142 (1189)
T KOG2041|consen   65 QTLEGHNASVMVVTWNE--NNQKLTTSDTSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVG  142 (1189)
T ss_pred             hhhccCcceEEEEEecc--ccccccccCCCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEE
Confidence            67899999999999998  889999999999999999987754333332  45678999999999999999999999887


Q ss_pred             EcCCCcEE-EEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCc-------eEEE
Q psy7108         119 DVESAAQV-GSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGI-------LLKK  190 (703)
Q Consensus       119 d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~-------~~~~  190 (703)
                      .++..+.- +.+++                      .....+.|++|.+.++.+-.+|.+.+||....-       +...
T Consensus       143 svdGNRIwgKeLkg----------------------~~l~hv~ws~D~~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn  200 (1189)
T KOG2041|consen  143 SVDGNRIWGKELKG----------------------QLLAHVLWSEDLEQALFKKANGETHLYDNQGNFERKLEKDCEVN  200 (1189)
T ss_pred             eeccceecchhcch----------------------heccceeecccHHHHHhhhcCCcEEEecccccHHHhhhhceEEe
Confidence            76644321 11222                      134578899999999888888999999976431       1111


Q ss_pred             EEeccCCccccccccceeeee--------ccCCCEEEEEcccCCCCCeeEEECCCCCCC-ccceeecCCccceEEEEEcC
Q psy7108         191 FTITQNKSLDGINDFINRRKM--------TEFGNVSLIETRETHEGGNVVLKLPGVKKG-DMAARVLKPEVRVFCVKFSP  261 (703)
Q Consensus       191 ~~~~~~~~~~~~~~~v~~~~~--------spdg~~l~~~~~~~~~~~~~~i~iwd~~~~-~~~~~~~~h~~~V~~l~~sp  261 (703)
                      .++  ..+  .....+..+.|        -||...+++.-..|      .+.+-.-.+. +++. + .-...+....|++
T Consensus       201 ~tg--~~s--~~~~kia~i~w~~g~~~~v~pdrP~lavcy~nG------r~QiMR~eND~~Pvv-~-dtgm~~vgakWnh  268 (1189)
T KOG2041|consen  201 GTG--IFS--NFPTKIAEIEWNTGPYQPVPPDRPRLAVCYANG------RMQIMRSENDPEPVV-V-DTGMKIVGAKWNH  268 (1189)
T ss_pred             eee--eec--CCCccccceeeccCccccCCCCCCEEEEEEcCc------eehhhhhcCCCCCeE-E-ecccEeecceecC
Confidence            111  100  01112333333        24666666665543      3444322222 2221 2 2225688899999


Q ss_pred             CCCEEEEEeCCC
Q psy7108         262 TGQAWVAATTEG  273 (703)
Q Consensus       262 dg~~l~s~s~Dg  273 (703)
                      +|..||.++.+.
T Consensus       269 ~G~vLAvcG~~~  280 (1189)
T KOG2041|consen  269 NGAVLAVCGNDS  280 (1189)
T ss_pred             CCcEEEEccCcc
Confidence            999999988653

>KOG2695|consensus

Probab=98.34  E-value=1.6e-06  Score=86.11  Aligned_cols=127  Identities=14%  Similarity=0.201  Sum_probs=103.4

Q ss_pred             CCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCC----ceeEEEecCCCcEEEEEEec-CCCEEEEEECCCeEEEEEc
Q psy7108          46 HEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVET----DTQHETIQLLSDALCVAYKP-DGTEIVVATLDGQLIMFDV  120 (703)
Q Consensus        46 H~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~----~~~~~~~~~~~~V~~v~~sp-dg~~las~s~dg~I~vwd~  120 (703)
                      -++.|.++.|..  .++++..|+..|.|...|++.+    ......+-|.+.|+++..-. ++++|++.+.+|+|++||+
T Consensus       251 sksDVfAlQf~~--s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rlyh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~  328 (425)
T KOG2695|consen  251 SKSDVFALQFAG--SDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLYHDSSVTSLQILQFSQQKLMASDMTGKIKLYDL  328 (425)
T ss_pred             cchhHHHHHhcc--cCCeeEecccCCcEEEEEeeecccCCCcceEEEEcCcchhhhhhhccccceEeeccCcCceeEeee
Confidence            456788999998  8999999999999999999866    34566677999999988766 7889999999999999999


Q ss_pred             CCCcE---EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEE
Q psy7108         121 ESAAQ---VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFT  192 (703)
Q Consensus       121 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~  192 (703)
                      +--+.   +.++++|....                  .-.-+-..+....+++++.|...++|.++.+..+.++.
T Consensus       329 R~~K~~~~V~qYeGHvN~~------------------a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl~tip  385 (425)
T KOG2695|consen  329 RATKCKKSVMQYEGHVNLS------------------AYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLLCTIP  385 (425)
T ss_pred             hhhhcccceeeeecccccc------------------cccccccccccceEEEccCeeEEEEEecccCceeeccC
Confidence            87666   88888886421                  11223446677788899999999999999999888765

>KOG3914|consensus

Probab=98.34  E-value=1.8e-06  Score=87.60  Aligned_cols=106  Identities=19%  Similarity=0.169  Sum_probs=82.9

Q ss_pred             EeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccch
Q psy7108          67 ASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVT  146 (703)
Q Consensus        67 gs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (703)
                      +++...+.+|.... .+.....+|-+-++.++|+||+++|+++..|..|++-.....-.+..+.-               
T Consensus       128 agD~~~~di~s~~~-~~~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~Iesfcl---------------  191 (390)
T KOG3914|consen  128 AGDVYSFDILSADS-GRCEPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCL---------------  191 (390)
T ss_pred             cCCceeeeeecccc-cCcchhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhcc---------------
Confidence            34556667777765 46677788999999999999999999999999999977665444443332               


Q ss_pred             hhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEe
Q psy7108         147 REQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTI  193 (703)
Q Consensus       147 ~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~  193 (703)
                          +|...|..++.-++ ..|+++|.|+++++||+++|+++.++..
T Consensus       192 ----GH~eFVS~isl~~~-~~LlS~sGD~tlr~Wd~~sgk~L~t~dl  233 (390)
T KOG3914|consen  192 ----GHKEFVSTISLTDN-YLLLSGSGDKTLRLWDITSGKLLDTCDL  233 (390)
T ss_pred             ----ccHhheeeeeeccC-ceeeecCCCCcEEEEecccCCcccccch
Confidence                23347999998765 4599999999999999999999877653

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=98.33  E-value=0.00046  Score=69.74  Aligned_cols=200  Identities=13%  Similarity=0.094  Sum_probs=122.7

Q ss_pred             EEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEe-cCCCEEEEEECCCeEEEEEcCCCcEEEEEe
Q psy7108          52 CIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYK-PDGTEIVVATLDGQLIMFDVESAAQVGSVE  130 (703)
Q Consensus        52 ~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~s-pdg~~las~s~dg~I~vwd~~~~~~~~~~~  130 (703)
                      ++.|.+. ++.++++--..+.|..|+..++..  ....... ...+++. +++ .++.+..+ .+.++|..+++......
T Consensus         4 gp~~d~~-~g~l~~~D~~~~~i~~~~~~~~~~--~~~~~~~-~~G~~~~~~~g-~l~v~~~~-~~~~~d~~~g~~~~~~~   77 (246)
T PF08450_consen    4 GPVWDPR-DGRLYWVDIPGGRIYRVDPDTGEV--EVIDLPG-PNGMAFDRPDG-RLYVADSG-GIAVVDPDTGKVTVLAD   77 (246)
T ss_dssp             EEEEETT-TTEEEEEETTTTEEEEEETTTTEE--EEEESSS-EEEEEEECTTS-EEEEEETT-CEEEEETTTTEEEEEEE
T ss_pred             ceEEECC-CCEEEEEEcCCCEEEEEECCCCeE--EEEecCC-CceEEEEccCC-EEEEEEcC-ceEEEecCCCcEEEEee
Confidence            5778873 556666666788999999877633  2233333 7777887 665 45555544 45666999886654444


Q ss_pred             ccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC--------CcEEEEECCCCceEEEEEeccCCccccc
Q psy7108         131 ARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS--------KYICIYSSREGILLKKFTITQNKSLDGI  202 (703)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d--------g~I~lwD~~~~~~~~~~~~~~~~~~~~~  202 (703)
                      ....               .......+.+++.|+|+..++....        +.|..++.. ++....... .       
T Consensus        78 ~~~~---------------~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~~-~-------  133 (246)
T PF08450_consen   78 LPDG---------------GVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVADG-L-------  133 (246)
T ss_dssp             EETT---------------CSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEEE-E-------
T ss_pred             ccCC---------------CcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEecC-c-------
Confidence            3111               0012268899999999977765433        557788877 554333321 1       


Q ss_pred             cccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcc----ceee---cCCccceEEEEEcCCCCEEEEEeCCC-E
Q psy7108         203 NDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDM----AARV---LKPEVRVFCVKFSPTGQAWVAATTEG-V  274 (703)
Q Consensus       203 ~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~----~~~~---~~h~~~V~~l~~spdg~~l~s~s~Dg-v  274 (703)
                       ...+.++|+|+++.++++....     ..|..+++.....    ...+   ....+....+++..+|+..++....+ |
T Consensus       134 -~~pNGi~~s~dg~~lyv~ds~~-----~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I  207 (246)
T PF08450_consen  134 -GFPNGIAFSPDGKTLYVADSFN-----GRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRI  207 (246)
T ss_dssp             -SSEEEEEEETTSSEEEEEETTT-----TEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEE
T ss_pred             -ccccceEECCcchheeeccccc-----ceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEE
Confidence             2457899999999877655432     3677777653211    1111   22223478899999999877766666 9


Q ss_pred             EEEEcCCCceecce
Q psy7108         275 HIYSLDSGYVFDPF  288 (703)
Q Consensus       275 ~iwd~~~~~~~~~~  288 (703)
                      .+++.+ |+....+
T Consensus       208 ~~~~p~-G~~~~~i  220 (246)
T PF08450_consen  208 VVFDPD-GKLLREI  220 (246)
T ss_dssp             EEEETT-SCEEEEE
T ss_pred             EEECCC-ccEEEEE
Confidence            999987 7665433

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>KOG4532|consensus

Probab=98.31  E-value=3.6e-05  Score=74.23  Aligned_cols=156  Identities=10%  Similarity=0.096  Sum_probs=108.5

Q ss_pred             eEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCcee-E--EEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEE
Q psy7108          50 VSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQ-H--ETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQV  126 (703)
Q Consensus        50 V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~-~--~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~  126 (703)
                      ++++++++  |+.++++.+....|-.|.++....- .  ......+.-.+..|+.....+|++.+||++.|||++.....
T Consensus       161 ~ns~~~sn--d~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tp  238 (344)
T KOG4532|consen  161 QNSLHYSN--DPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATP  238 (344)
T ss_pred             eeeeEEcC--CCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEecccccc
Confidence            88999999  9999999999999999998765432 2  22335566788999999999999999999999999875443


Q ss_pred             EEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCC--CEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccc
Q psy7108         127 GSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADG--SCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGIND  204 (703)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg--~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~  204 (703)
                      ......               ..+-|.+.+..+.|++.|  .+|+..-.-+.+.+.|+++++....+.............
T Consensus       239 m~~~ss---------------trp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I~i~~d~~~~~~tq  303 (344)
T KOG4532|consen  239 MAEISS---------------TRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQVIVIPDDVERKHNTQ  303 (344)
T ss_pred             hhhhcc---------------cCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceeeEEecCcccccccccc
Confidence            222211               123367799999999865  345555556789999999988776665444322222222


Q ss_pred             cceeeeeccCCCEEEEEc
Q psy7108         205 FINRRKMTEFGNVSLIET  222 (703)
Q Consensus       205 ~v~~~~~spdg~~l~~~~  222 (703)
                      .+..-.|+.++....+..
T Consensus       304 ~ifgt~f~~~n~s~~v~~  321 (344)
T KOG4532|consen  304 HIFGTNFNNENESNDVKN  321 (344)
T ss_pred             ccccccccCCCccccccc
Confidence            355556666665544433

>KOG1645|consensus

Probab=98.29  E-value=9.8e-05  Score=75.22  Aligned_cols=235  Identities=14%  Similarity=0.140  Sum_probs=130.7

Q ss_pred             CCCccccccccCCCcCeEEEEEcCCCCCC-EEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCC-EEEEEEC
Q psy7108          34 AARVLKPEVLSGHEGPVSCIEFSPVLSST-GMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGT-EIVVATL  111 (703)
Q Consensus        34 tg~~~~~~~l~gH~~~V~~l~~sp~~dg~-~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~-~las~s~  111 (703)
                      +-+..  ..+.+|...|.+++|+|  ... ++..++.+..|+|.|+++...+.....+ ..+.+++|.-|.. +|..|..
T Consensus       182 ~fkss--q~lp~~g~~IrdlafSp--~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYaGl~  256 (463)
T KOG1645|consen  182 DFKSS--QILPGEGSFIRDLAFSP--FNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYAGLQ  256 (463)
T ss_pred             Ccchh--hcccccchhhhhhccCc--cccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEEecc
Confidence            33444  67788999999999999  555 7889999999999999988655555555 8899999998775 6667778


Q ss_pred             CCeEEEEEcCCCcEE-EEEec---------------cccCCCCC---------------CCCccchh-hcccCCccEEEE
Q psy7108         112 DGQLIMFDVESAAQV-GSVEA---------------RRDLDSGR---------------LDTDLVTR-EQSLKAKAVSTV  159 (703)
Q Consensus       112 dg~I~vwd~~~~~~~-~~~~~---------------~~~~~~~~---------------~~~~~~~~-~~~~~~~~V~~i  159 (703)
                      +|.|.+||++..+.. ..+.+               ...+..+.               ...+.+.. ...+..+...++
T Consensus       257 nG~VlvyD~R~~~~~~~e~~a~~t~~pv~~i~~~~~n~~f~~gglLv~~lt~l~f~ei~~s~~~~p~vlele~pG~cism  336 (463)
T KOG1645|consen  257 NGMVLVYDMRQPEGPLMELVANVTINPVHKIAPVQPNKIFTSGGLLVFALTVLQFYEIVFSAECLPCVLELEPPGICISM  336 (463)
T ss_pred             CceEEEEEccCCCchHhhhhhhhccCcceeecccCccccccccceEEeeehhhhhhhhhccccCCCcccccCCCcceeee
Confidence            999999999864321 11111               00000000               00000000 111123455566


Q ss_pred             EEcCCCCEEEEEecCC-------cEE-EEECCCCceEEEEEecc-CCccccccccceeeeeccCCCEEEEEcccCCCCCe
Q psy7108         160 CYSADGSCILAAGQSK-------YIC-IYSSREGILLKKFTITQ-NKSLDGINDFINRRKMTEFGNVSLIETRETHEGGN  230 (703)
Q Consensus       160 ~~spdg~~l~s~s~dg-------~I~-lwD~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~  230 (703)
                      ++.+..+.++..-+.+       .|- --|-.+|..+...+... +. ...-...-..+.-.++.++++. ..+    ..
T Consensus       337 qy~~~snh~l~tyRs~pn~p~~r~il~~~d~~dG~pVc~~r~~~~Gs-~~~kl~t~~ai~~~~~nn~iv~-~gd----~t  410 (463)
T KOG1645|consen  337 QYHGVSNHLLLTYRSNPNFPQSRFILGRIDFRDGFPVCGKRRTYFGS-KQTKLSTTQAIRAVEDNNYIVV-VGD----ST  410 (463)
T ss_pred             eecCccceEEEEecCCCCCccceeeeeeeccccCceeeeecccccCC-cccccccccceeccccccEEEE-ecC----Cc
Confidence            6666555555433221       111 11223333332211100 00 0000000111222344444433 322    22


Q ss_pred             eEEECCCCCCCccceeecCCccceEEEEEcCC--CCEEEEEeCCCEEEEEcC
Q psy7108         231 VVLKLPGVKKGDMAARVLKPEVRVFCVKFSPT--GQAWVAATTEGVHIYSLD  280 (703)
Q Consensus       231 ~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spd--g~~l~s~s~Dgv~iwd~~  280 (703)
                      +.+.+||..+.+.++++.-. .+|.+++....  +.+|++-++|.++||..+
T Consensus       411 n~lil~D~~s~evvQ~l~~~-epv~Dicp~~~n~~syLa~LTd~~v~Iyk~e  461 (463)
T KOG1645|consen  411 NELILQDPHSFEVVQTLALS-EPVLDICPNDTNGSSYLALLTDDRVHIYKNE  461 (463)
T ss_pred             ceeEEeccchhheeeecccC-cceeecceeecCCcchhhheecceEEEEecC
Confidence            58999999999888776543 66766654332  457788887778888754

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=98.29  E-value=0.0001  Score=77.16  Aligned_cols=243  Identities=15%  Similarity=0.155  Sum_probs=154.4

Q ss_pred             cccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECC---------
Q psy7108          42 VLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLD---------  112 (703)
Q Consensus        42 ~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~d---------  112 (703)
                      .+..-.-++..++|||  .|.+|++.... .|.+|.-.....+.++  ....|..+.|+|.+++|.+=+..         
T Consensus        27 ~~~~~~~p~~~~~~SP--~G~~l~~~~~~-~V~~~~g~~~~~l~~~--~~~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~  101 (561)
T COG5354          27 RFESENWPVAYVSESP--LGTYLFSEHAA-GVECWGGPSKAKLVRF--RHPDVKYLDFSPNEKYLVTWSREPIIEPEIEI  101 (561)
T ss_pred             cccccCcchhheeecC--cchheehhhcc-ceEEccccchhheeee--ecCCceecccCcccceeeeeccCCccChhhcc
Confidence            3344667899999999  99999988664 5899987766533332  33479999999999999985543         


Q ss_pred             ------CeEEEEEcCCCcEEEEEeccccCCCCC--------------CCCc-cc----hhh------cccCCccEEEEEE
Q psy7108         113 ------GQLIMFDVESAAQVGSVEARRDLDSGR--------------LDTD-LV----TRE------QSLKAKAVSTVCY  161 (703)
Q Consensus       113 ------g~I~vwd~~~~~~~~~~~~~~~~~~~~--------------~~~~-~~----~~~------~~~~~~~V~~i~~  161 (703)
                            ..+.+||+.+|..+..+........+.              ...+ ..    ...      .......+...+|
T Consensus       102 sp~~~~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARvv~~sl~i~e~t~n~~~~p~~~lr~~gi~dFsi  181 (561)
T COG5354         102 SPFTSKNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARVVGSSLYIHEITDNIEEHPFKNLRPVGILDFSI  181 (561)
T ss_pred             CCccccCceeEEeccCceeEeeccccCCcccccceeeeeecchhhhhhccCeEEEEecCCccccCchhhccccceeeEEe
Confidence                  359999999999887776654321111              0000 00    000      0112356888889


Q ss_pred             cCCC--CEEEE-----EecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCC-----CCC
Q psy7108         162 SADG--SCILA-----AGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETH-----EGG  229 (703)
Q Consensus       162 spdg--~~l~s-----~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~-----~~~  229 (703)
                      +|.+  ..|+.     .+.++.+++|.+..+..+.+...-..        .-..+.|.+.|+++++-.....     --+
T Consensus       182 sP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~--------~~~qLkW~~~g~~ll~l~~t~~ksnKsyfg  253 (561)
T COG5354         182 SPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKV--------SGVQLKWQVLGKYLLVLVMTHTKSNKSYFG  253 (561)
T ss_pred             cCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEee--------cccEEEEecCCceEEEEEEEeeecccceec
Confidence            9964  33443     46678899999987766554332111        1235778888887665332111     112


Q ss_pred             eeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEe--CCC-EEEEEcCCCceecce---eeeEEEccch
Q psy7108         230 NVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAAT--TEG-VHIYSLDSGYVFDPF---LLDISITPQS  298 (703)
Q Consensus       230 ~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s--~Dg-v~iwd~~~~~~~~~~---~~~~~~spd~  298 (703)
                      ...+++++++...+. ....-.++|...+|.|+++.+++.+  .+. +.+++++..-.+-..   ...+.|+|.+
T Consensus       254 esnLyl~~~~e~~i~-V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~Nl~~~~Pe~~rNT~~fsp~~  327 (561)
T COG5354         254 ESNLYLLRITERSIP-VEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGNLRFYFPEQKRNTIFFSPHE  327 (561)
T ss_pred             cceEEEEeecccccc-eeccccccceeeeecccCCceeEEecccccceeecccccceEEecCCcccccccccCcc
Confidence            246788887744332 2225578899999999999886655  445 889998876332221   2346777766

>KOG4190|consensus

Probab=98.27  E-value=5.2e-06  Score=86.86  Aligned_cols=158  Identities=14%  Similarity=0.179  Sum_probs=113.2

Q ss_pred             ecccCCceEEecCCceee-c--cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEec-
Q psy7108          14 ETHEGGNVVLKLPGVKKG-D--MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQ-   89 (703)
Q Consensus        14 ~~~~~~~~~i~~~~v~~~-d--~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~-   89 (703)
                      |...+.+..+++|.++.. |  .|..|.  .+++.|+.+|.++.|-.  +...++++  ||-+.+||.--+....+... 
T Consensus       750 FiSASkDKTVKLWSik~EgD~~~tsaCQ--fTY~aHkk~i~~igfL~--~lr~i~Sc--D~giHlWDPFigr~Laq~~da  823 (1034)
T KOG4190|consen  750 FISASKDKTVKLWSIKPEGDEIGTSACQ--FTYQAHKKPIHDIGFLA--DLRSIASC--DGGIHLWDPFIGRLLAQMEDA  823 (1034)
T ss_pred             eeeccCCceEEEEEeccccCccccceee--eEhhhccCcccceeeee--ccceeeec--cCcceeecccccchhHhhhcC
Confidence            445566777888887753 3  234466  78899999999999998  77788776  78999999866644432222 


Q ss_pred             -CCCcEEEEEEecC--CCEE-EEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCC
Q psy7108          90 -LLSDALCVAYKPD--GTEI-VVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADG  165 (703)
Q Consensus        90 -~~~~V~~v~~spd--g~~l-as~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg  165 (703)
                       ..+.+..+..-|+  ...+ +.++...+|+++|.+..+-...++....               ++..+.+.+++..|.|
T Consensus       824 pk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna---------------~~Pna~~R~iaVa~~G  888 (1034)
T KOG4190|consen  824 PKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNA---------------PGPNALTRAIAVADKG  888 (1034)
T ss_pred             cccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccC---------------CCCchheeEEEeccCc
Confidence             2223333333333  3333 4446788999999999887776665432               2233468999999999


Q ss_pred             CEEEEEecCCcEEEEECCCCceEEEEE
Q psy7108         166 SCILAAGQSKYICIYSSREGILLKKFT  192 (703)
Q Consensus       166 ~~l~s~s~dg~I~lwD~~~~~~~~~~~  192 (703)
                      ++++++-.+|+|.+.|.++|+.+..+.
T Consensus       889 N~lAa~LSnGci~~LDaR~G~vINswr  915 (1034)
T KOG4190|consen  889 NKLAAALSNGCIAILDARNGKVINSWR  915 (1034)
T ss_pred             chhhHHhcCCcEEEEecCCCceeccCC
Confidence            999999999999999999998877654

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=98.27  E-value=0.00015  Score=72.66  Aligned_cols=197  Identities=16%  Similarity=0.155  Sum_probs=120.0

Q ss_pred             CCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEE-eccccCCCC
Q psy7108          60 SSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSV-EARRDLDSG  138 (703)
Q Consensus        60 dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~-~~~~~~~~~  138 (703)
                      ++..+++++.++.+..||..+++....... .+.+.... ..++..+++++.++.+..+|..+|+.+... .......  
T Consensus        35 ~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~-~~~~~~~~-~~~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~--  110 (238)
T PF13360_consen   35 DGGRVYVASGDGNLYALDAKTGKVLWRFDL-PGPISGAP-VVDGGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPA--  110 (238)
T ss_dssp             ETTEEEEEETTSEEEEEETTTSEEEEEEEC-SSCGGSGE-EEETTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTC--
T ss_pred             eCCEEEEEcCCCEEEEEECCCCCEEEEeec-ccccccee-eecccccccccceeeeEecccCCcceeeeecccccccc--
Confidence            466777778999999999989966554443 33222212 234566777778899999999999998774 3321100  


Q ss_pred             CCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCcccc--ccccceeeeeccCCC
Q psy7108         139 RLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDG--INDFINRRKMTEFGN  216 (703)
Q Consensus       139 ~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~spdg~  216 (703)
                                     ..........++..++++..++.|..+|+++|+.+.............  ....+..-....++ 
T Consensus       111 ---------------~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  174 (238)
T PF13360_consen  111 ---------------GVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSSPISSFSDINGSPVISDG-  174 (238)
T ss_dssp             ---------------STB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS--EEEETTEEEEEECCTT-
T ss_pred             ---------------ccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCCcceeeecccccceEEECC-
Confidence                           011112222237788888889999999999999988877633211110  00111222222344 


Q ss_pred             EEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCcee
Q psy7108         217 VSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVF  285 (703)
Q Consensus       217 ~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~  285 (703)
                      .+++...++     ..+.+ |..+++......  ...+.. ...+++..++.++.++ +..||+.+|+..
T Consensus       175 ~v~~~~~~g-----~~~~~-d~~tg~~~w~~~--~~~~~~-~~~~~~~~l~~~~~~~~l~~~d~~tG~~~  235 (238)
T PF13360_consen  175 RVYVSSGDG-----RVVAV-DLATGEKLWSKP--ISGIYS-LPSVDGGTLYVTSSDGRLYALDLKTGKVV  235 (238)
T ss_dssp             EEEEECCTS-----SEEEE-ETTTTEEEEEEC--SS-ECE-CEECCCTEEEEEETTTEEEEEETTTTEEE
T ss_pred             EEEEEcCCC-----eEEEE-ECCCCCEEEEec--CCCccC-CceeeCCEEEEEeCCCEEEEEECCCCCEE
Confidence            555555443     24666 988887553222  222222 1456778888888888 999999999753

...

>KOG3914|consensus

Probab=98.24  E-value=1.4e-05  Score=81.46  Aligned_cols=162  Identities=14%  Similarity=0.151  Sum_probs=106.7

Q ss_pred             eEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCce---eEEEecCCCcEEEEEEecCCCEEEEEEC---CCeEEEEEcCCC
Q psy7108          50 VSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDT---QHETIQLLSDALCVAYKPDGTEIVVATL---DGQLIMFDVESA  123 (703)
Q Consensus        50 V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~---~~~~~~~~~~V~~v~~spdg~~las~s~---dg~I~vwd~~~~  123 (703)
                      ...+..+|  ++.+||.+..++...+++.....+   ..........-+++.|..+......+..   ...+.+|....+
T Consensus        65 ~~~~~~s~--~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~  142 (390)
T KOG3914|consen   65 PALVLTSD--SGRLVAVATSSKQRAVFDYRENPKGAKLLDVSCVPKRPTAISFIREDTSVLVADKAGDVYSFDILSADSG  142 (390)
T ss_pred             ccccccCC--CceEEEEEeCCCceEEEEEecCCCcceeeeEeecccCcceeeeeeccceEEEEeecCCceeeeeeccccc
Confidence            34455677  888999888887777777655432   2333334444455566555555544433   344555555443


Q ss_pred             cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCcccccc
Q psy7108         124 AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGIN  203 (703)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~  203 (703)
                      .... +-+|                    -..++.++|+||+++|+++.+|..|++-....--.+..|-       -||.
T Consensus       143 ~~~~-~lGh--------------------vSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~Iesfc-------lGH~  194 (390)
T KOG3914|consen  143 RCEP-ILGH--------------------VSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFC-------LGHK  194 (390)
T ss_pred             Ccch-hhhh--------------------hhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhc-------cccH
Confidence            3322 2233                    3378999999999999999999999998876554444442       3577


Q ss_pred             ccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeec
Q psy7108         204 DFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL  248 (703)
Q Consensus       204 ~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~  248 (703)
                      +.|..++.-++.. ++.++++      .++++||+++|+++..+.
T Consensus       195 eFVS~isl~~~~~-LlS~sGD------~tlr~Wd~~sgk~L~t~d  232 (390)
T KOG3914|consen  195 EFVSTISLTDNYL-LLSGSGD------KTLRLWDITSGKLLDTCD  232 (390)
T ss_pred             hheeeeeeccCce-eeecCCC------CcEEEEecccCCcccccc
Confidence            7999999887655 4554444      489999999998775443

>KOG1409|consensus

Probab=98.23  E-value=4.9e-06  Score=82.78  Aligned_cols=84  Identities=18%  Similarity=0.451  Sum_probs=73.3

Q ss_pred             CccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc-eeEEEecCCCcEEEEEEecCCCEEEEEECCCe
Q psy7108          36 RVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD-TQHETIQLLSDALCVAYKPDGTEIVVATLDGQ  114 (703)
Q Consensus        36 ~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~-~~~~~~~~~~~V~~v~~spdg~~las~s~dg~  114 (703)
                      .++  .++.+|.+++++++|.|  ....|.+|..|..+.+||+..+. .......|.+.|..+...+--+.+.+++.||.
T Consensus       188 ~~i--~~~~~h~~~~~~l~Wd~--~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~  263 (404)
T KOG1409|consen  188 QLI--TTFNGHTGEVTCLKWDP--GQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDGG  263 (404)
T ss_pred             ceE--EEEcCcccceEEEEEcC--CCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhhhhheeeeeccCCCe
Confidence            455  77899999999999999  88999999999999999997554 34566779999999998888899999999999


Q ss_pred             EEEEEcCCC
Q psy7108         115 LIMFDVESA  123 (703)
Q Consensus       115 I~vwd~~~~  123 (703)
                      |.+||++..
T Consensus       264 i~~w~mn~~  272 (404)
T KOG1409|consen  264 IVVWNMNVK  272 (404)
T ss_pred             EEEEeccce
Confidence            999999754

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=98.23  E-value=0.0011  Score=67.01  Aligned_cols=181  Identities=14%  Similarity=0.147  Sum_probs=112.7

Q ss_pred             eEEEEEc-CCCCCCEEEEEeCCCcEEEEEcCCCceeEEEec------CCCcEEEEEEecCCCEEEEEECC--------Ce
Q psy7108          50 VSCIEFS-PVLSSTGMVSASWDKTVKLWNAVETDTQHETIQ------LLSDALCVAYKPDGTEIVVATLD--------GQ  114 (703)
Q Consensus        50 V~~l~~s-p~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~------~~~~V~~v~~spdg~~las~s~d--------g~  114 (703)
                      ..++++. +  ++. |+.+..+ .+.++|..+++. ..+..      .....+.+++.|+|+..++....        |.
T Consensus        42 ~~G~~~~~~--~g~-l~v~~~~-~~~~~d~~~g~~-~~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~  116 (246)
T PF08450_consen   42 PNGMAFDRP--DGR-LYVADSG-GIAVVDPDTGKV-TVLADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGS  116 (246)
T ss_dssp             EEEEEEECT--TSE-EEEEETT-CEEEEETTTTEE-EEEEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEE
T ss_pred             CceEEEEcc--CCE-EEEEEcC-ceEEEecCCCcE-EEEeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccc
Confidence            6677777 5  654 4555544 455569877743 22222      23457889999999977766543        55


Q ss_pred             EEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEE-EecCCcEEEEECCCCce-E---E
Q psy7108         115 LIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILA-AGQSKYICIYSSREGIL-L---K  189 (703)
Q Consensus       115 I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s-~s~dg~I~lwD~~~~~~-~---~  189 (703)
                      |..++.. ++.......-.                     ..+.++|+||++.|++ -+..+.|..+|+..... +   +
T Consensus       117 v~~~~~~-~~~~~~~~~~~---------------------~pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~  174 (246)
T PF08450_consen  117 VYRIDPD-GKVTVVADGLG---------------------FPNGIAFSPDGKTLYVADSFNGRIWRFDLDADGGELSNRR  174 (246)
T ss_dssp             EEEEETT-SEEEEEEEEES---------------------SEEEEEEETTSSEEEEEETTTTEEEEEEEETTTCCEEEEE
T ss_pred             eEEECCC-CeEEEEecCcc---------------------cccceEECCcchheeecccccceeEEEeccccccceeeee
Confidence            7777777 55444333322                     5689999999998765 46677899999864221 1   2


Q ss_pred             EEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEc-CCCCEEEE
Q psy7108         190 KFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFS-PTGQAWVA  268 (703)
Q Consensus       190 ~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~s-pdg~~l~s  268 (703)
                      .+.....     .......+++..+|+..++....+      .|.++|.+ |+.+..+.-....+++++|. |+.+.|..
T Consensus       175 ~~~~~~~-----~~g~pDG~~vD~~G~l~va~~~~~------~I~~~~p~-G~~~~~i~~p~~~~t~~~fgg~~~~~L~v  242 (246)
T PF08450_consen  175 VFIDFPG-----GPGYPDGLAVDSDGNLWVADWGGG------RIVVFDPD-GKLLREIELPVPRPTNCAFGGPDGKTLYV  242 (246)
T ss_dssp             EEEE-SS-----SSCEEEEEEEBTTS-EEEEEETTT------EEEEEETT-SCEEEEEE-SSSSEEEEEEESTTSSEEEE
T ss_pred             eEEEcCC-----CCcCCCcceEcCCCCEEEEEcCCC------EEEEECCC-ccEEEEEcCCCCCEEEEEEECCCCCEEEE
Confidence            2211111     112456789999998766654432      78888877 87777777665689999994 67666644


Q ss_pred             E
Q psy7108         269 A  269 (703)
Q Consensus       269 ~  269 (703)
                      .
T Consensus       243 T  243 (246)
T PF08450_consen  243 T  243 (246)
T ss_dssp             E
T ss_pred             E
Confidence            3

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>KOG2314|consensus

Probab=98.22  E-value=5.2e-05  Score=80.00  Aligned_cols=227  Identities=16%  Similarity=0.171  Sum_probs=142.7

Q ss_pred             CeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEEC-----------CCeEEE
Q psy7108          49 PVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATL-----------DGQLIM  117 (703)
Q Consensus        49 ~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~-----------dg~I~v  117 (703)
                      .-+-+.|||  .|.+|+|-..-| |.+|--++-..+.. +.|. .|.-+.|||+.++|++-+.           ...+.|
T Consensus       212 Tetyv~wSP--~GTYL~t~Hk~G-I~lWGG~~f~r~~R-F~Hp-~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~I  286 (698)
T KOG2314|consen  212 TETYVRWSP--KGTYLVTFHKQG-IALWGGESFDRIQR-FYHP-GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLII  286 (698)
T ss_pred             eeeeEEecC--CceEEEEEeccc-eeeecCccHHHHHh-ccCC-CceeeecCCccceEEEecCCccccCcccCCCceEEE
Confidence            346789999  999999988765 78896544333222 2343 5889999999999998543           257999


Q ss_pred             EEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCC
Q psy7108         118 FDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNK  197 (703)
Q Consensus       118 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~  197 (703)
                      ||+.+|...+.+......                 .-...-..||.|++++|--.. .+|.||+..+..++..-..    
T Consensus       287 WDI~tG~lkrsF~~~~~~-----------------~~~WP~frWS~DdKy~Arm~~-~sisIyEtpsf~lld~Ksl----  344 (698)
T KOG2314|consen  287 WDIATGLLKRSFPVIKSP-----------------YLKWPIFRWSHDDKYFARMTG-NSISIYETPSFMLLDKKSL----  344 (698)
T ss_pred             EEccccchhcceeccCCC-----------------ccccceEEeccCCceeEEecc-ceEEEEecCceeeeccccc----
Confidence            999999988887763220                 002334689999999987655 5699999876433221111    


Q ss_pred             ccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeC------
Q psy7108         198 SLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATT------  271 (703)
Q Consensus       198 ~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~------  271 (703)
                          -.+.|....|+|.+..++.=+-.. .+....+.+-.+.+++.++...-++-.=..+.|-.+|.+|+.--.      
T Consensus       345 ----ki~gIr~FswsP~~~llAYwtpe~-~~~parvtL~evPs~~~iRt~nlfnVsDckLhWQk~gdyLcvkvdR~tK~~  419 (698)
T KOG2314|consen  345 ----KISGIRDFSWSPTSNLLAYWTPET-NNIPARVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGDYLCVKVDRHTKSK  419 (698)
T ss_pred             ----CCccccCcccCCCcceEEEEcccc-cCCcceEEEEecCccceeeeccceeeeccEEEeccCCcEEEEEEEeecccc
Confidence                113577789999988877644322 222234555555555555444444444445778888998875321      


Q ss_pred             -CC----EEEEEcCCCce------ecceeeeEEEccchhhhHhhcCC
Q psy7108         272 -EG----VHIYSLDSGYV------FDPFLLDISITPQSVKEALADKD  307 (703)
Q Consensus       272 -Dg----v~iwd~~~~~~------~~~~~~~~~~spd~~~~~l~sg~  307 (703)
                       .|    +-|+.++....      +.......+|-|.|-+-.+.+|.
T Consensus       420 ~~g~f~n~eIfrireKdIpve~velke~vi~FaWEP~gdkF~vi~g~  466 (698)
T KOG2314|consen  420 VKGQFSNLEIFRIREKDIPVEVVELKESVIAFAWEPHGDKFAVISGN  466 (698)
T ss_pred             ccceEeeEEEEEeeccCCCceeeecchheeeeeeccCCCeEEEEEcc
Confidence             12    44666554332      22233567888888544444443

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=98.22  E-value=5.8e-05  Score=79.03  Aligned_cols=179  Identities=13%  Similarity=0.122  Sum_probs=123.5

Q ss_pred             EEEEEcCCCCCCEEEEEe-----------CCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEE--CCCeEEE
Q psy7108          51 SCIEFSPVLSSTGMVSAS-----------WDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVAT--LDGQLIM  117 (703)
Q Consensus        51 ~~l~~sp~~dg~~L~sgs-----------~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s--~dg~I~v  117 (703)
                      ..+.|.+  .|++|+.--           ...++.|+++..... .......++|...+|.|+++.+++.+  .+..+.+
T Consensus       226 ~qLkW~~--~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~i-~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~  302 (561)
T COG5354         226 VQLKWQV--LGKYLLVLVMTHTKSNKSYFGESNLYLLRITERSI-PVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSV  302 (561)
T ss_pred             cEEEEec--CCceEEEEEEEeeecccceeccceEEEEeeccccc-ceeccccccceeeeecccCCceeEEecccccceee
Confidence            4578888  777665321           124677888864433 22236789999999999999876654  5778999


Q ss_pred             EEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC---CcEEEEECCCCceEE-EEEe
Q psy7108         118 FDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS---KYICIYSSREGILLK-KFTI  193 (703)
Q Consensus       118 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d---g~I~lwD~~~~~~~~-~~~~  193 (703)
                      +|++.. ....+...                      .=..+.|+|.+++++.++-|   |.|-+||......+. .+.+
T Consensus       303 ~~lr~N-l~~~~Pe~----------------------~rNT~~fsp~~r~il~agF~nl~gni~i~~~~~rf~~~~~~~~  359 (561)
T COG5354         303 FDLRGN-LRFYFPEQ----------------------KRNTIFFSPHERYILFAGFDNLQGNIEIFDPAGRFKVAGAFNG  359 (561)
T ss_pred             cccccc-eEEecCCc----------------------ccccccccCcccEEEEecCCccccceEEeccCCceEEEEEeec
Confidence            999865 33333322                      23568899999999997755   679999988654433 4443


Q ss_pred             ccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC
Q psy7108         194 TQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG  273 (703)
Q Consensus       194 ~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg  273 (703)
                      .          ...-+.|+|||+++.++........+..+++||+.....-        ..+.+.|.|.|++..+.+.+.
T Consensus       360 ~----------n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g~~~f--------el~~~~W~p~~~~~ttsSs~~  421 (561)
T COG5354         360 L----------NTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYGAKVF--------ELTNITWDPSGQYVTTSSSCP  421 (561)
T ss_pred             C----------CceEeeccCCceEEEecCCCcccccCcceEEEEecCchhh--------hhhhccccCCcccceeeccCC
Confidence            2          2345689999999988876654455678999997643321        456688999888876666543

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=98.20  E-value=0.00017  Score=72.91  Aligned_cols=191  Identities=17%  Similarity=0.190  Sum_probs=123.3

Q ss_pred             EEEcCCCCCCEEEEEe-----CCCcEEEEEcC-CCceeEEEecCCCcEEEEEEecCCCEEEEEEC---------------
Q psy7108          53 IEFSPVLSSTGMVSAS-----WDKTVKLWNAV-ETDTQHETIQLLSDALCVAYKPDGTEIVVATL---------------  111 (703)
Q Consensus        53 l~~sp~~dg~~L~sgs-----~Dg~V~iWd~~-~~~~~~~~~~~~~~V~~v~~spdg~~las~s~---------------  111 (703)
                      -.|||  ||++|++.=     ..|.|-|||.. +-..+.++..+.-....+.+.|||+.|+++..               
T Consensus        56 g~fs~--dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl  133 (305)
T PF07433_consen   56 GVFSP--DGRLLYTTENDYETGRGVIGVYDAARGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNL  133 (305)
T ss_pred             EEEcC--CCCEEEEeccccCCCcEEEEEEECcCCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecCh
Confidence            57999  999999863     34789999998 44455555566667788999999988887632               


Q ss_pred             ---CCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCC-------cEEEEE
Q psy7108         112 ---DGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSK-------YICIYS  181 (703)
Q Consensus       112 ---dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg-------~I~lwD  181 (703)
                         +.++...|..+|+.+....-..                ..|.-.+.-+++.++|..++..-..+       -+.+++
T Consensus       134 ~tM~psL~~ld~~sG~ll~q~~Lp~----------------~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~  197 (305)
T PF07433_consen  134 DTMQPSLVYLDARSGALLEQVELPP----------------DLHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHR  197 (305)
T ss_pred             hhcCCceEEEecCCCceeeeeecCc----------------cccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEc
Confidence               1235555666666655533211                12334799999999997666543222       133333


Q ss_pred             CCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcC
Q psy7108         182 SREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSP  261 (703)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~sp  261 (703)
                        .+..+..+..... .......++-+++++++|..+++++-.+     ..+.+||..+++.+....-.  .+..++-.+
T Consensus       198 --~g~~~~~~~~p~~-~~~~l~~Y~gSIa~~~~g~~ia~tsPrG-----g~~~~~d~~tg~~~~~~~l~--D~cGva~~~  267 (305)
T PF07433_consen  198 --RGGALRLLPAPEE-QWRRLNGYIGSIAADRDGRLIAVTSPRG-----GRVAVWDAATGRLLGSVPLP--DACGVAPTD  267 (305)
T ss_pred             --CCCcceeccCChH-HHHhhCCceEEEEEeCCCCEEEEECCCC-----CEEEEEECCCCCEeeccccC--ceeeeeecC
Confidence              2333333332221 1233445899999999999998888654     48999999999877654433  366677666


Q ss_pred             CCCEEEEEeCC
Q psy7108         262 TGQAWVAATTE  272 (703)
Q Consensus       262 dg~~l~s~s~D  272 (703)
                      ++ ++++.+..
T Consensus       268 ~~-f~~ssG~G  277 (305)
T PF07433_consen  268 DG-FLVSSGQG  277 (305)
T ss_pred             Cc-eEEeCCCc
Confidence            66 55555543

>KOG2041|consensus

Probab=98.20  E-value=1.2e-05  Score=86.76  Aligned_cols=225  Identities=12%  Similarity=0.135  Sum_probs=145.9

Q ss_pred             CcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCce---------------eEEEecCCCcEEEEEEecCCCEEEEEEC
Q psy7108          47 EGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDT---------------QHETIQLLSDALCVAYKPDGTEIVVATL  111 (703)
Q Consensus        47 ~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~---------------~~~~~~~~~~V~~v~~spdg~~las~s~  111 (703)
                      .....|++|+.  ...++|.|+.||.+++-.+.+...               -..+-+|.+.|..+.|+.+.+.|-++..
T Consensus        14 nvkL~c~~WNk--e~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt   91 (1189)
T KOG2041|consen   14 NVKLHCAEWNK--ESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDT   91 (1189)
T ss_pred             CceEEEEEEcc--cCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCC
Confidence            35678999999  899999999999999987754321               0223468999999999999999999999


Q ss_pred             CCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEE
Q psy7108         112 DGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKF  191 (703)
Q Consensus       112 dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~  191 (703)
                      +|.|.||-+-.|.-...+.                  +......|.+++|+.||..+...-.||.|.+=.+...+.-.+ 
T Consensus        92 ~GlIiVWmlykgsW~EEMi------------------NnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNRIwgK-  152 (1189)
T KOG2041|consen   92 SGLIIVWMLYKGSWCEEMI------------------NNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNRIWGK-  152 (1189)
T ss_pred             CceEEEEeeecccHHHHHh------------------hCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccceecch-
Confidence            9999999886654321111                  111233689999999999999999999988877664432110 


Q ss_pred             EeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC-------cccee----ecCCccceEEEEEc
Q psy7108         192 TITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG-------DMAAR----VLKPEVRVFCVKFS  260 (703)
Q Consensus       192 ~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~-------~~~~~----~~~h~~~V~~l~~s  260 (703)
                            .+.+  .....+.|++|.+.+++.-..|      .+.++|....       ++...    +......|..+.|.
T Consensus       153 ------eLkg--~~l~hv~ws~D~~~~Lf~~ang------e~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~  218 (1189)
T KOG2041|consen  153 ------ELKG--QLLAHVLWSEDLEQALFKKANG------ETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWN  218 (1189)
T ss_pred             ------hcch--heccceeecccHHHHHhhhcCC------cEEEecccccHHHhhhhceEEeeeeeecCCCccccceeec
Confidence                  0111  1345688999988877765543      5777775432       11000    11111224455553


Q ss_pred             --------CCCCEEEEEeCCC-EEEEEcCCCcee-----cceeeeEEEccchhhhHhhcCCc
Q psy7108         261 --------PTGQAWVAATTEG-VHIYSLDSGYVF-----DPFLLDISITPQSVKEALADKDY  308 (703)
Q Consensus       261 --------pdg~~l~s~s~Dg-v~iwd~~~~~~~-----~~~~~~~~~spd~~~~~l~sg~~  308 (703)
                              ||...|+.+-.+| +.|-.-.+....     ........|+++|  ..|+..+.
T Consensus       219 ~g~~~~v~pdrP~lavcy~nGr~QiMR~eND~~Pvv~dtgm~~vgakWnh~G--~vLAvcG~  278 (1189)
T KOG2041|consen  219 TGPYQPVPPDRPRLAVCYANGRMQIMRSENDPEPVVVDTGMKIVGAKWNHNG--AVLAVCGN  278 (1189)
T ss_pred             cCccccCCCCCCEEEEEEcCceehhhhhcCCCCCeEEecccEeecceecCCC--cEEEEccC
Confidence                    5778888888888 665543332211     1112456777877  55554443

>KOG0280|consensus

Probab=98.20  E-value=5e-05  Score=74.29  Aligned_cols=195  Identities=11%  Similarity=0.063  Sum_probs=124.1

Q ss_pred             eEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc--eeEEEecCCCcEEEEEEecCC-CEEEEEECCCeEEEEEcCCCc-E
Q psy7108          50 VSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD--TQHETIQLLSDALCVAYKPDG-TEIVVATLDGQLIMFDVESAA-Q  125 (703)
Q Consensus        50 V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~--~~~~~~~~~~~V~~v~~spdg-~~las~s~dg~I~vwd~~~~~-~  125 (703)
                      ..++.|++  .+..++++..+|.+.+-+.....  .......|.-++....|+... +.+.+|+.|+.+..||++..+ .
T Consensus       124 ~lslD~~~--~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~  201 (339)
T KOG0280|consen  124 ALSLDIST--SGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTF  201 (339)
T ss_pred             eeEEEeec--cCceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcce
Confidence            45678888  88889999888988854433332  223455688888889987644 578899999999999998332 2


Q ss_pred             EEE-EeccccCCCCCCCCccchhhcccCCccEEEEEEcC-CCCEEEEEecCCcEEEEECCC-CceEEEEEeccCCccccc
Q psy7108         126 VGS-VEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA-DGSCILAAGQSKYICIYSSRE-GILLKKFTITQNKSLDGI  202 (703)
Q Consensus       126 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp-dg~~l~s~s~dg~I~lwD~~~-~~~~~~~~~~~~~~~~~~  202 (703)
                      +-. .+.                    |...|.+|.-+| ++.+|++|+.|-.|++||.|+ ++++..-.         .
T Consensus       202 i~~n~kv--------------------H~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~~---------v  252 (339)
T KOG0280|consen  202 IWHNSKV--------------------HTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKAK---------V  252 (339)
T ss_pred             eeeccee--------------------eecceEEEecCCCCCceEEEeccccceeeeehhcccCccccCc---------c
Confidence            211 122                    334788888776 678999999999999999994 55554322         1


Q ss_pred             cccceeeeeccCCCEE--EEEcccCCCCCeeEEECCCCCCC--c---cceeecCCccceEEEEEcCCCCEEEEEeC-CC-
Q psy7108         203 NDFINRRKMTEFGNVS--LIETRETHEGGNVVLKLPGVKKG--D---MAARVLKPEVRVFCVKFSPTGQAWVAATT-EG-  273 (703)
Q Consensus       203 ~~~v~~~~~spdg~~l--~~~~~~~~~~~~~~i~iwd~~~~--~---~~~~~~~h~~~V~~l~~spdg~~l~s~s~-Dg-  273 (703)
                      ...|..+..+|.-...  ++....|       .++-+...+  +   .......|.+-+..-.|......+||++- |. 
T Consensus       253 ~GGVWRi~~~p~~~~~lL~~CMh~G-------~ki~~~~~~~~e~~~~~~s~~~hdSl~YG~DWd~~~~~lATCsFYDk~  325 (339)
T KOG0280|consen  253 GGGVWRIKHHPEIFHRLLAACMHNG-------AKILDSSDKVLEFQIVLPSDKIHDSLCYGGDWDSKDSFLATCSFYDKK  325 (339)
T ss_pred             ccceEEEEecchhhhHHHHHHHhcC-------ceEEEecccccchheeeeccccccceeeccccccccceeeeeeccccc
Confidence            1378888888865422  2222221       233332222  2   22233456666667777555567888663 44 


Q ss_pred             EE-EEEcCCC
Q psy7108         274 VH-IYSLDSG  282 (703)
Q Consensus       274 v~-iwd~~~~  282 (703)
                      ++ +|-.-++
T Consensus       326 ~~~~Wl~~t~  335 (339)
T KOG0280|consen  326 IRQLWLHITG  335 (339)
T ss_pred             eeeeeeeccC
Confidence            44 6655444

>KOG2314|consensus

Probab=98.19  E-value=8.6e-05  Score=78.40  Aligned_cols=221  Identities=12%  Similarity=0.193  Sum_probs=136.8

Q ss_pred             CCcCeEEEEEcCCCCCCEEEEEeC-----------CCcEEEEEcCCCceeEEEec--CCCcEE-EEEEecCCCEEEEEEC
Q psy7108          46 HEGPVSCIEFSPVLSSTGMVSASW-----------DKTVKLWNAVETDTQHETIQ--LLSDAL-CVAYKPDGTEIVVATL  111 (703)
Q Consensus        46 H~~~V~~l~~sp~~dg~~L~sgs~-----------Dg~V~iWd~~~~~~~~~~~~--~~~~V~-~v~~spdg~~las~s~  111 (703)
                      |. .|.-+.|||  +.++|+|=|.           ...++|||+.+|...+.+..  ....+. -+.||.|++++|.-..
T Consensus       249 Hp-~Vq~idfSP--~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~  325 (698)
T KOG2314|consen  249 HP-GVQFIDFSP--NEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG  325 (698)
T ss_pred             CC-CceeeecCC--ccceEEEecCCccccCcccCCCceEEEEEccccchhcceeccCCCccccceEEeccCCceeEEecc
Confidence            44 478899999  9999998652           14689999999965555444  222232 4789999999998765


Q ss_pred             CCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe--c---CCcEEEEECCCCc
Q psy7108         112 DGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG--Q---SKYICIYSSREGI  186 (703)
Q Consensus       112 dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s--~---dg~I~lwD~~~~~  186 (703)
                       ..|.||+..+-..   ++...                 ..-..|....|+|.++.||-=+  .   -..+.+..+.+++
T Consensus       326 -~sisIyEtpsf~l---ld~Ks-----------------lki~gIr~FswsP~~~llAYwtpe~~~~parvtL~evPs~~  384 (698)
T KOG2314|consen  326 -NSISIYETPSFML---LDKKS-----------------LKISGIRDFSWSPTSNLLAYWTPETNNIPARVTLMEVPSKR  384 (698)
T ss_pred             -ceEEEEecCceee---ecccc-----------------cCCccccCcccCCCcceEEEEcccccCCcceEEEEecCccc
Confidence             5799998765332   22211                 1122688899999988887522  1   1357777777777


Q ss_pred             eEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCC----CCCeeEEECCCCCCCccceeecCCccceEEEEEcCC
Q psy7108         187 LLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETH----EGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPT  262 (703)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~----~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spd  262 (703)
                      .+++-..+.-        .-..+-|-.+|.++.+-...-.    .+....+.|+.++..+.......-...|...+|-|.
T Consensus       385 ~iRt~nlfnV--------sDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~velke~vi~FaWEP~  456 (698)
T KOG2314|consen  385 EIRTKNLFNV--------SDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEVVELKESVIAFAWEPH  456 (698)
T ss_pred             eeeeccceee--------eccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCCCceeeecchheeeeeeccC
Confidence            6665432211        1123456667777665332110    111234555555554433333445677889999999


Q ss_pred             CCEEEEEeCCC----EEEEEcCCCce----ec----ceeeeEEEccch
Q psy7108         263 GQAWVAATTEG----VHIYSLDSGYV----FD----PFLLDISITPQS  298 (703)
Q Consensus       263 g~~l~s~s~Dg----v~iwd~~~~~~----~~----~~~~~~~~spd~  298 (703)
                      |+.+++-+.+.    +.+|.+++...    +.    .....+.|+|.|
T Consensus       457 gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~dk~~~N~vfwsPkG  504 (698)
T KOG2314|consen  457 GDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELDKKFANTVFWSPKG  504 (698)
T ss_pred             CCeEEEEEccccccceeEEEeecCCCchhhhhhhcccccceEEEcCCC
Confidence            99886655432    78998874221    11    122568899988

>KOG1912|consensus

Probab=98.15  E-value=0.00011  Score=80.32  Aligned_cols=221  Identities=13%  Similarity=0.129  Sum_probs=150.7

Q ss_pred             cCCCccccccccCCCcCeEEEEEcCCC----------CCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEec-
Q psy7108          33 MAARVLKPEVLSGHEGPVSCIEFSPVL----------SSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKP-  101 (703)
Q Consensus        33 ~tg~~~~~~~l~gH~~~V~~l~~sp~~----------dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~sp-  101 (703)
                      .+-+.+  ..++-|...|+.+.|.|..          ..-+||++...|.|.+||...+..+..+..+..++..++|-+ 
T Consensus        43 ~s~q~i--qsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s~~~~l~~~~~~~qdl~W~~~  120 (1062)
T KOG1912|consen   43 RSLQLI--QSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLASVINWLSHSNDSVQDLCWVPA  120 (1062)
T ss_pred             hhhhhh--hccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhhhhhhhcCCCcchhheeeeec
Confidence            466777  8899999999999998831          122677888889999999988877777777888999999876 


Q ss_pred             --CC-CEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC-CCCEEEEEecCCcE
Q psy7108         102 --DG-TEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA-DGSCILAAGQSKYI  177 (703)
Q Consensus       102 --dg-~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp-dg~~l~s~s~dg~I  177 (703)
                        +. ..|++-.....+.+|+..+|+..-.......                    ...|+.+.| |.+.+..-+..|.+
T Consensus       121 rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~--------------------iLs~f~~DPfd~rh~~~l~s~g~v  180 (1062)
T KOG1912|consen  121 RDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHE--------------------ILSCFRVDPFDSRHFCVLGSKGFV  180 (1062)
T ss_pred             cCcchheeEEecCCcEEEEEEccCCceeeccccCCc--------------------ceeeeeeCCCCcceEEEEccCceE
Confidence              33 3566666678999999999998776655443                    567788888 56666666666776


Q ss_pred             EEEECCC----CceEEEEEeccC--------------Ccccc------ccccceeeeeccCCCEEEEEcccCCCCCeeEE
Q psy7108         178 CIYSSRE----GILLKKFTITQN--------------KSLDG------INDFINRRKMTEFGNVSLIETRETHEGGNVVL  233 (703)
Q Consensus       178 ~lwD~~~----~~~~~~~~~~~~--------------~~~~~------~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i  233 (703)
                      .+-+.-.    ..+.+.++....              .....      .....-.++|+|.-+.+++..-.      +.+
T Consensus       181 l~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~lfi~~p------rel  254 (1062)
T KOG1912|consen  181 LSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNILFITFP------REL  254 (1062)
T ss_pred             EEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhceEEEEec------cce
Confidence            6665421    111222221111              00000      00122345778887766555543      368


Q ss_pred             ECCCCCCCccceeecCCccceEEEEEcCCCC--EEEEEeCCC-EEEEEcCC
Q psy7108         234 KLPGVKKGDMAARVLKPEVRVFCVKFSPTGQ--AWVAATTEG-VHIYSLDS  281 (703)
Q Consensus       234 ~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~--~l~s~s~Dg-v~iwd~~~  281 (703)
                      .++|++-..++....-..+.+.-+.+-|+++  .|.+...|| +.+|-...
T Consensus       255 lv~dle~~~~l~vvpier~~akfv~vlP~~~rd~LfclH~nG~ltirvrk~  305 (1062)
T KOG1912|consen  255 LVFDLEYECCLAVVPIERGGAKFVDVLPDPRRDALFCLHSNGRLTIRVRKE  305 (1062)
T ss_pred             EEEcchhhceeEEEEeccCCcceeEeccCCCcceEEEEecCCeEEEEEeec
Confidence            8999988777777766666666677878765  588999999 88887543

>KOG2066|consensus

Probab=98.13  E-value=2.4e-05  Score=86.08  Aligned_cols=184  Identities=12%  Similarity=0.147  Sum_probs=131.8

Q ss_pred             CcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEE
Q psy7108          47 EGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQV  126 (703)
Q Consensus        47 ~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~  126 (703)
                      .+.++|++++    +.+|+.|..+|.|++.+.... . ...+.|...      ..+|.++++|+.||+|.|-.+-+.+..
T Consensus        39 ~D~is~~av~----~~~~~~GtH~g~v~~~~~~~~-~-~~~~~~s~~------~~~Gey~asCS~DGkv~I~sl~~~~~~  106 (846)
T KOG2066|consen   39 NDAISCCAVH----DKFFALGTHRGAVYLTTCQGN-P-KTNFDHSSS------ILEGEYVASCSDDGKVVIGSLFTDDEI  106 (846)
T ss_pred             hhHHHHHHhh----cceeeeccccceEEEEecCCc-c-ccccccccc------ccCCceEEEecCCCcEEEeeccCCccc
Confidence            4667888886    489999999999999997544 2 444555544      668999999999999999999988887


Q ss_pred             EEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC-----CCEEEEEecCCcEEEEECCCCceEEEEEeccCCcccc
Q psy7108         127 GSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD-----GSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDG  201 (703)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd-----g~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~  201 (703)
                      .++.-+.                     ++.+++++||     .+.+++|+..| +.++.-+-........      ...
T Consensus       107 ~~~df~r---------------------piksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~------l~~  158 (846)
T KOG2066|consen  107 TQYDFKR---------------------PIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVV------LSE  158 (846)
T ss_pred             eeEecCC---------------------cceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCcccee------eec
Confidence            7776654                     7899999998     57789998888 7776532111111111      122


Q ss_pred             ccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccc------eEEEEEcCCCCEEEEEeCCCEE
Q psy7108         202 INDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVR------VFCVKFSPTGQAWVAATTEGVH  275 (703)
Q Consensus       202 ~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~------V~~l~~spdg~~l~s~s~Dgv~  275 (703)
                      ..++|.++.|.  |.+++.+...|       +++||..+.+.+..+......      ...+.|.++. .|+.|=.|.|+
T Consensus       159 ~eG~I~~i~W~--g~lIAWand~G-------v~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~-~LVIGW~d~v~  228 (846)
T KOG2066|consen  159 GEGPIHSIKWR--GNLIAWANDDG-------VKVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDED-RLVIGWGDSVK  228 (846)
T ss_pred             CccceEEEEec--CcEEEEecCCC-------cEEEeccccceeeccCCCCCCCCcccCCCceEecCCC-eEEEecCCeEE
Confidence            33488888885  77888888765       999999888766655543332      4567887665 46666667777


Q ss_pred             EEEcC
Q psy7108         276 IYSLD  280 (703)
Q Consensus       276 iwd~~  280 (703)
                      |..+.
T Consensus       229 i~~I~  233 (846)
T KOG2066|consen  229 ICSIK  233 (846)
T ss_pred             EEEEe
Confidence            77766

>KOG1920|consensus

Probab=98.11  E-value=0.00021  Score=82.38  Aligned_cols=221  Identities=10%  Similarity=0.156  Sum_probs=135.2

Q ss_pred             CCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcE
Q psy7108          46 HEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQ  125 (703)
Q Consensus        46 H~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~  125 (703)
                      ..+.|.++.|..  ++..++.+..+|.|.+-|.++.. ....-....+|.+++||||++.++..+.++++.+.+- +-.+
T Consensus        67 gd~~i~s~~fl~--d~~~i~v~~~~G~iilvd~et~~-~eivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT~-~f~~  142 (1265)
T KOG1920|consen   67 GDDEIVSVQFLA--DTNSICVITALGDIILVDPETLE-LEIVGNVDNGISAASWSPDEELLALITGRQTLLFMTK-DFEP  142 (1265)
T ss_pred             CCcceEEEEEec--ccceEEEEecCCcEEEEcccccc-eeeeeeccCceEEEeecCCCcEEEEEeCCcEEEEEec-cccc
Confidence            346899999999  99999999999999988876652 3333346788999999999999999988888776542 1111


Q ss_pred             EEEEecc-------ccCCC--CCCCCccc-------hhhccc---------CCccEEEEEEcCCCCEEEEE-----ecCC
Q psy7108         126 VGSVEAR-------RDLDS--GRLDTDLV-------TREQSL---------KAKAVSTVCYSADGSCILAA-----GQSK  175 (703)
Q Consensus       126 ~~~~~~~-------~~~~~--~~~~~~~~-------~~~~~~---------~~~~V~~i~~spdg~~l~s~-----s~dg  175 (703)
                      +..-.-+       ..+..  ++...+..       ......         -...=+.|+|--||+++++.     ...+
T Consensus       143 i~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~R  222 (1265)
T KOG1920|consen  143 IAEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTR  222 (1265)
T ss_pred             hhccccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCce
Confidence            1000000       00000  00000000       000000         01122469999999999883     2237


Q ss_pred             cEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCC---CCCccceeecCCcc
Q psy7108         176 YICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGV---KKGDMAARVLKPEV  252 (703)
Q Consensus       176 ~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~---~~~~~~~~~~~h~~  252 (703)
                      .|++||-+ |..-.+-..     ..   ..-.+++|-|.|..+++.-...+++   .|.++..   +.|+..........
T Consensus       223 kirV~drE-g~Lns~se~-----~~---~l~~~LsWkPsgs~iA~iq~~~sd~---~IvffErNGL~hg~f~l~~p~de~  290 (1265)
T KOG1920|consen  223 KIRVYDRE-GALNSTSEP-----VE---GLQHSLSWKPSGSLIAAIQCKTSDS---DIVFFERNGLRHGEFVLPFPLDEK  290 (1265)
T ss_pred             eEEEeccc-chhhcccCc-----cc---ccccceeecCCCCeEeeeeecCCCC---cEEEEecCCccccccccCCccccc
Confidence            89999976 433222111     11   1335689999999888766554333   5777742   23333333334445


Q ss_pred             ceEEEEEcCCCCEEEE---EeCCC-EEEEEcCCC
Q psy7108         253 RVFCVKFSPTGQAWVA---ATTEG-VHIYSLDSG  282 (703)
Q Consensus       253 ~V~~l~~spdg~~l~s---~s~Dg-v~iwd~~~~  282 (703)
                      .|..++|+.++..||+   ..... |.+|.+.+-
T Consensus       291 ~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~Ny  324 (1265)
T KOG1920|consen  291 EVEELAWNSNSDILAVVTSNLENSLVQLWTTGNY  324 (1265)
T ss_pred             chheeeecCCCCceeeeecccccceEEEEEecCe
Confidence            5999999999999987   44444 999987653

>KOG1275|consensus

Probab=98.11  E-value=7.1e-05  Score=83.35  Aligned_cols=180  Identities=11%  Similarity=0.154  Sum_probs=118.2

Q ss_pred             CCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCC
Q psy7108          61 STGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRL  140 (703)
Q Consensus        61 g~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~  140 (703)
                      +..++-|+-...+...|+.+.+..+...-..+.|.-++  .+++.+.+|...|+|.+-|.++-+.++++.+|.+      
T Consensus       147 ~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR--~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~------  218 (1118)
T KOG1275|consen  147 PSTLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIMR--YNNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSG------  218 (1118)
T ss_pred             CcceeecchhhheeeeecccceeeeeeeccCCceEEEE--ecCcEEEeecccceEEeecCCcCceeeeeecccc------
Confidence            34566666556667778776643333222333455444  5689999999999999999999999999999876      


Q ss_pred             CCccchhhcccCCccEEEEEEcCCCCEEEEEec---------CCcEEEEECCCCceEEEEEeccCCccccccccceeeee
Q psy7108         141 DTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ---------SKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKM  211 (703)
Q Consensus       141 ~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~---------dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  211 (703)
                                    .+.+  |+-.|+.|++|+.         |..|++||+|..+.+..+..+...         .-+.|
T Consensus       219 --------------siSD--fDv~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P---------~flrf  273 (1118)
T KOG1275|consen  219 --------------SISD--FDVQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGP---------QFLRF  273 (1118)
T ss_pred             --------------ceee--eeccCCeEEEeecccccccccccchhhhhhhhhhhccCCcccccCc---------hhhhh
Confidence                          5654  4556899998863         567999999987766554433321         22445


Q ss_pred             ccCC-CEEEEEcccCCCCCeeEEECCCCCCC-cc---ceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEc
Q psy7108         212 TEFG-NVSLIETRETHEGGNVVLKLPGVKKG-DM---AARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSL  279 (703)
Q Consensus       212 spdg-~~l~~~~~~~~~~~~~~i~iwd~~~~-~~---~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~  279 (703)
                      .|.= ..+++.+..|      ...+-|..+. .+   +.........+.++++|++|+.++.+..+| |.+|.-
T Consensus       274 ~Psl~t~~~V~S~sG------q~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa~  341 (1118)
T KOG1275|consen  274 HPSLTTRLAVTSQSG------QFQFVDTATLSNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWAD  341 (1118)
T ss_pred             cccccceEEEEeccc------ceeeccccccCCCccceeEEccCCCcceeEEecCCCceEEEecccCcEeeecC
Confidence            5542 2334444333      4555552221 11   111122234489999999999999999999 999983

>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]

Probab=98.06  E-value=4.3e-06  Score=95.87  Aligned_cols=92  Identities=23%  Similarity=0.238  Sum_probs=68.0

Q ss_pred             chhhhhhcccccccceeecccCcc-ccccCcccCcCCccceeeeecccchhhhhhhhcCCcccccccccccCCCCCCcCC
Q psy7108         415 PPTLFARMRTRGYDIWLWNARGNV-YSREHVNLTSEQNKFYRFSCDFNVYTLELISRLGPLRIKPKVEKMETGSSDEESS  493 (703)
Q Consensus       415 l~~~la~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  493 (703)
                      .+++++    +||-|...|.||+. |+++.......+..                                         
T Consensus       416 ~q~~~~----~G~~V~~~n~RGS~GyG~~F~~~~~~~~g-----------------------------------------  450 (620)
T COG1506         416 IQVLAS----AGYAVLAPNYRGSTGYGREFADAIRGDWG-----------------------------------------  450 (620)
T ss_pred             hHHHhc----CCeEEEEeCCCCCCccHHHHHHhhhhccC-----------------------------------------
Confidence            666666    89999999999998 99987765543332                                         


Q ss_pred             CcccceeecccCcCCCCCCccccccCchhhhhcccCCchhhHHHhHccCCC--cceEEEEEecCceeeeeccCCCchhhh
Q psy7108         494 KDDETEIRVLDEDVPRSSDTGDIQLKSTRMNELGLYDTTATIDYILNQTGH--NSLITLGHSLGTTNVLIAGSLRPEYQT  571 (703)
Q Consensus       494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~~~~~~i~~~~~~--~~~~~~g~S~G~~~~~~~~~~~~~~~~  571 (703)
                                                     +--+.|+.++++|+.+.+.-  ++++++|||+||||+++++...+    
T Consensus       451 -------------------------------~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~----  495 (620)
T COG1506         451 -------------------------------GVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTP----  495 (620)
T ss_pred             -------------------------------CccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCc----
Confidence                                           33456888899988777753  59999999999999888776443    


Q ss_pred             hHHHhhhhhhhhhcc
Q psy7108         572 KVRLNVLWAQSAFLG  586 (703)
Q Consensus       572 ~~~~~~~~~p~~~~~  586 (703)
                      .+++.++.+|.+++-
T Consensus       496 ~f~a~~~~~~~~~~~  510 (620)
T COG1506         496 RFKAAVAVAGGVDWL  510 (620)
T ss_pred             hhheEEeccCcchhh
Confidence            456666666644433

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=98.06  E-value=0.0002  Score=77.51  Aligned_cols=205  Identities=15%  Similarity=0.227  Sum_probs=130.9

Q ss_pred             ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEe---CC-CcEEEEEcCCCceeEEEecCCCcEEEEEEecCC
Q psy7108          28 VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSAS---WD-KTVKLWNAVETDTQHETIQLLSDALCVAYKPDG  103 (703)
Q Consensus        28 v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs---~D-g~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg  103 (703)
                      +...|.+|...  +.+..-...+..-+|+|  ++..++..+   .. ..+.++++.+++. .......+.-..-+|+|||
T Consensus       175 l~~~D~dg~~~--~~l~~~~~~~~~p~ws~--~~~~~~y~~f~~~~~~~i~~~~l~~g~~-~~i~~~~g~~~~P~fspDG  249 (425)
T COG0823         175 LALGDYDGYNQ--QKLTDSGSLILTPAWSP--DGKKLAYVSFELGGCPRIYYLDLNTGKR-PVILNFNGNNGAPAFSPDG  249 (425)
T ss_pred             EEEEccCCcce--eEecccCcceeccccCc--CCCceEEEEEecCCCceEEEEeccCCcc-ceeeccCCccCCccCCCCC
Confidence            34556667766  77777778889999999  888776542   22 3588899987743 3333455555678999999


Q ss_pred             CEEEEEE-CCCe--EEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec-CC--cE
Q psy7108         104 TEIVVAT-LDGQ--LIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ-SK--YI  177 (703)
Q Consensus       104 ~~las~s-~dg~--I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~-dg--~I  177 (703)
                      +.|+.+. .||.  |++.|+.+++..+ +.....                    .-+.-.|+|||+.++..+. .|  .|
T Consensus       250 ~~l~f~~~rdg~~~iy~~dl~~~~~~~-Lt~~~g--------------------i~~~Ps~spdG~~ivf~Sdr~G~p~I  308 (425)
T COG0823         250 SKLAFSSSRDGSPDIYLMDLDGKNLPR-LTNGFG--------------------INTSPSWSPDGSKIVFTSDRGGRPQI  308 (425)
T ss_pred             CEEEEEECCCCCccEEEEcCCCCccee-cccCCc--------------------cccCccCCCCCCEEEEEeCCCCCcce
Confidence            9877654 4554  7777887776433 333222                    2235679999999987654 33  48


Q ss_pred             EEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEE
Q psy7108         178 CIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCV  257 (703)
Q Consensus       178 ~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l  257 (703)
                      .++|.+.+.. ..++....        .-....++|||+.+++.+..   ++...|.+.|+.++... +..........-
T Consensus       309 ~~~~~~g~~~-~riT~~~~--------~~~~p~~SpdG~~i~~~~~~---~g~~~i~~~~~~~~~~~-~~lt~~~~~e~p  375 (425)
T COG0823         309 YLYDLEGSQV-TRLTFSGG--------GNSNPVWSPDGDKIVFESSS---GGQWDIDKNDLASGGKI-RILTSTYLNESP  375 (425)
T ss_pred             EEECCCCCce-eEeeccCC--------CCcCccCCCCCCEEEEEecc---CCceeeEEeccCCCCcE-EEccccccCCCC
Confidence            8888877655 33322221        11267899999999988743   22245777777766542 222333334456


Q ss_pred             EEcCCCCEEEEEeC
Q psy7108         258 KFSPTGQAWVAATT  271 (703)
Q Consensus       258 ~~spdg~~l~s~s~  271 (703)
                      +|.|+|+.+...+.
T Consensus       376 s~~~ng~~i~~~s~  389 (425)
T COG0823         376 SWAPNGRMIMFSSG  389 (425)
T ss_pred             CcCCCCceEEEecc
Confidence            78888887754443

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=98.06  E-value=0.00011  Score=79.61  Aligned_cols=193  Identities=15%  Similarity=0.154  Sum_probs=120.2

Q ss_pred             CceeEEEecCCCcEEEEEEecCCCEEEEEEC---C-CeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccE
Q psy7108          81 TDTQHETIQLLSDALCVAYKPDGTEIVVATL---D-GQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAV  156 (703)
Q Consensus        81 ~~~~~~~~~~~~~V~~v~~spdg~~las~s~---d-g~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V  156 (703)
                      +.....+......+..-+|+|+++.++..+.   . ..+.++|+++++....+....                     .-
T Consensus       182 g~~~~~l~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~~g---------------------~~  240 (425)
T COG0823         182 GYNQQKLTDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNFNG---------------------NN  240 (425)
T ss_pred             CcceeEecccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeeccCC---------------------cc
Confidence            3334444455667788999999998766532   2 459999999887655544211                     23


Q ss_pred             EEEEEcCCCCEEEEE-ecCCc--EEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEE
Q psy7108         157 STVCYSADGSCILAA-GQSKY--ICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVL  233 (703)
Q Consensus       157 ~~i~~spdg~~l~s~-s~dg~--I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i  233 (703)
                      ...+|+|||+.|+.+ ..|+.  |.++|+.++...+ +....+        .-....|+|||+.+++.++.   ++.-.|
T Consensus       241 ~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~~-Lt~~~g--------i~~~Ps~spdG~~ivf~Sdr---~G~p~I  308 (425)
T COG0823         241 GAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLPR-LTNGFG--------INTSPSWSPDGSKIVFTSDR---GGRPQI  308 (425)
T ss_pred             CCccCCCCCCEEEEEECCCCCccEEEEcCCCCccee-cccCCc--------cccCccCCCCCCEEEEEeCC---CCCcce
Confidence            457899999988765 45554  8888988776333 332222        22367899999999998764   344578


Q ss_pred             ECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCC-C---EEEEEcCCCceecce-----eeeEEEccchhhhHhh
Q psy7108         234 KLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTE-G---VHIYSLDSGYVFDPF-----LLDISITPQSVKEALA  304 (703)
Q Consensus       234 ~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~D-g---v~iwd~~~~~~~~~~-----~~~~~~spd~~~~~l~  304 (703)
                      .+.|...++..+....-.. -..-.|||||++++..+.. |   |.+.+..++...+.+     ...-++.+++......
T Consensus       309 ~~~~~~g~~~~riT~~~~~-~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~~~~lt~~~~~e~ps~~~ng~~i~~~  387 (425)
T COG0823         309 YLYDLEGSQVTRLTFSGGG-NSNPVWSPDGDKIVFESSSGGQWDIDKNDLASGGKIRILTSTYLNESPSWAPNGRMIMFS  387 (425)
T ss_pred             EEECCCCCceeEeeccCCC-CcCccCCCCCCEEEEEeccCCceeeEEeccCCCCcEEEccccccCCCCCcCCCCceEEEe
Confidence            8888877765333222222 2267899999999776643 3   667777666532221     2345566666433333


Q ss_pred             cCC
Q psy7108         305 DKD  307 (703)
Q Consensus       305 sg~  307 (703)
                      ++.
T Consensus       388 s~~  390 (425)
T COG0823         388 SGQ  390 (425)
T ss_pred             ccC
Confidence            333

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=98.04  E-value=1.6e-05  Score=54.72  Aligned_cols=37  Identities=22%  Similarity=0.330  Sum_probs=34.2

Q ss_pred             eeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEE
Q psy7108          83 TQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFD  119 (703)
Q Consensus        83 ~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd  119 (703)
                      ....+..|.+.|.+++|+|++..|++++.|+.|++||
T Consensus         3 ~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    3 CVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             EEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            4566778999999999999999999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>KOG1912|consensus

Probab=98.02  E-value=0.00016  Score=79.20  Aligned_cols=230  Identities=14%  Similarity=0.181  Sum_probs=147.6

Q ss_pred             CcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCC------------CEEEEEECCCe
Q psy7108          47 EGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDG------------TEIVVATLDGQ  114 (703)
Q Consensus        47 ~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg------------~~las~s~dg~  114 (703)
                      ...-.++.|+|   +.++|.|+. ..|.+-|..+-+.+..+..|...|+.+.|.|-.            -.||++...|.
T Consensus        15 ~sN~~A~Dw~~---~GLiAygsh-slV~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~Gr   90 (1062)
T KOG1912|consen   15 RSNRNAADWSP---SGLIAYGSH-SLVSVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGR   90 (1062)
T ss_pred             cccccccccCc---cceEEEecC-ceEEEEehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCc
Confidence            34467889998   457888876 467788887776666777799999999998731            25777888899


Q ss_pred             EEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC---CC-CEEEEEecCCcEEEEECCCCceEEE
Q psy7108         115 LIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA---DG-SCILAAGQSKYICIYSSREGILLKK  190 (703)
Q Consensus       115 I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp---dg-~~l~s~s~dg~I~lwD~~~~~~~~~  190 (703)
                      |.+||...+..+..+..+.+                    ++..++|-+   +. ..|++-....++.+|+..+|+..-+
T Consensus        91 Iil~d~~~~s~~~~l~~~~~--------------------~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk  150 (1062)
T KOG1912|consen   91 IILVDFVLASVINWLSHSND--------------------SVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWK  150 (1062)
T ss_pred             EEEEEehhhhhhhhhcCCCc--------------------chhheeeeeccCcchheeEEecCCcEEEEEEccCCceeec
Confidence            99999999888877777655                    778888865   34 4566667778999999999988776


Q ss_pred             EEeccCCccccccccceeeeeccCC-CEEEEEcccCCCCCeeEEECC-CCCC------CccceeecCCcc----------
Q psy7108         191 FTITQNKSLDGINDFINRRKMTEFG-NVSLIETRETHEGGNVVLKLP-GVKK------GDMAARVLKPEV----------  252 (703)
Q Consensus       191 ~~~~~~~~~~~~~~~v~~~~~spdg-~~l~~~~~~~~~~~~~~i~iw-d~~~------~~~~~~~~~h~~----------  252 (703)
                      +.....        ...++.+.|.. +.+.+.+..|      .+-+- ++..      ++..+....|..          
T Consensus       151 ~~ys~~--------iLs~f~~DPfd~rh~~~l~s~g------~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at  216 (1062)
T KOG1912|consen  151 YDYSHE--------ILSCFRVDPFDSRHFCVLGSKG------FVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETAT  216 (1062)
T ss_pred             cccCCc--------ceeeeeeCCCCcceEEEEccCc------eEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhc
Confidence            654333        44455666543 2333333222      11111 1111      111111111111          


Q ss_pred             ---------------ceEEEEEcCCCCEE-EEEeCCCEEEEEcCCCceeccee------eeEEEccchhhhHhhcCCcce
Q psy7108         253 ---------------RVFCVKFSPTGQAW-VAATTEGVHIYSLDSGYVFDPFL------LDISITPQSVKEALADKDYAK  310 (703)
Q Consensus       253 ---------------~V~~l~~spdg~~l-~s~s~Dgv~iwd~~~~~~~~~~~------~~~~~spd~~~~~l~sg~~~~  310 (703)
                                     -...++|+|.-+-+ ...-..++.|+|++-..++....      --+.+-|+..+..|.....++
T Consensus       217 ~ns~ts~~~sa~fity~a~faf~p~~rn~lfi~~prellv~dle~~~~l~vvpier~~akfv~vlP~~~rd~LfclH~nG  296 (1062)
T KOG1912|consen  217 GNSTTSTPASAYFITYCAQFAFSPHWRNILFITFPRELLVFDLEYECCLAVVPIERGGAKFVDVLPDPRRDALFCLHSNG  296 (1062)
T ss_pred             cccccCCCcchhHHHHHHhhhcChhhhceEEEEeccceEEEcchhhceeEEEEeccCCcceeEeccCCCcceEEEEecCC
Confidence                           01235778875544 44444449999998766654332      136777888778888777788


Q ss_pred             EEEE
Q psy7108         311 ALMM  314 (703)
Q Consensus       311 ~l~l  314 (703)
                      .+.+
T Consensus       297 ~lti  300 (1062)
T KOG1912|consen  297 RLTI  300 (1062)
T ss_pred             eEEE
Confidence            8777

>KOG2066|consensus

Probab=98.01  E-value=0.00018  Score=79.39  Aligned_cols=147  Identities=15%  Similarity=0.161  Sum_probs=98.0

Q ss_pred             CCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecC-----CCEEEEEECCCeEEEEEcCCCcEEEEEecccc
Q psy7108          60 SSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPD-----GTEIVVATLDGQLIMFDVESAAQVGSVEARRD  134 (703)
Q Consensus        60 dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spd-----g~~las~s~dg~I~vwd~~~~~~~~~~~~~~~  134 (703)
                      +|.+++|||.||+|.|-.+.+.+. ........++.+++++|+     .+.+++|+..| +.++.-+=-........+  
T Consensus        82 ~Gey~asCS~DGkv~I~sl~~~~~-~~~~df~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~--  157 (846)
T KOG2066|consen   82 EGEYVASCSDDGKVVIGSLFTDDE-ITQYDFKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLS--  157 (846)
T ss_pred             CCceEEEecCCCcEEEeeccCCcc-ceeEecCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeee--
Confidence            699999999999999998877743 444567789999999998     56889998888 777653211111111111  


Q ss_pred             CCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccC
Q psy7108         135 LDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEF  214 (703)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spd  214 (703)
                                      ...++|.+++|.  |+++|-++.+| |++||+.+++.+..++.+.....  ....-..+.|.++
T Consensus       158 ----------------~~eG~I~~i~W~--g~lIAWand~G-v~vyd~~~~~~l~~i~~p~~~~R--~e~fpphl~W~~~  216 (846)
T KOG2066|consen  158 ----------------EGEGPIHSIKWR--GNLIAWANDDG-VKVYDTPTRQRLTNIPPPSQSVR--PELFPPHLHWQDE  216 (846)
T ss_pred             ----------------cCccceEEEEec--CcEEEEecCCC-cEEEeccccceeeccCCCCCCCC--cccCCCceEecCC
Confidence                            124589999997  78888888777 99999999887776654432111  1123345677766


Q ss_pred             CCEEEEEcccCCCCCeeEEECCCCC
Q psy7108         215 GNVSLIETRETHEGGNVVLKLPGVK  239 (703)
Q Consensus       215 g~~l~~~~~~~~~~~~~~i~iwd~~  239 (703)
                      .+. +++-++       +|++..++
T Consensus       217 ~~L-VIGW~d-------~v~i~~I~  233 (846)
T KOG2066|consen  217 DRL-VIGWGD-------SVKICSIK  233 (846)
T ss_pred             CeE-EEecCC-------eEEEEEEe
Confidence            553 444333       46666555

>KOG0882|consensus

Probab=97.98  E-value=2.7e-05  Score=80.14  Aligned_cols=211  Identities=14%  Similarity=0.088  Sum_probs=140.4

Q ss_pred             CCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc---eeEEEecCCCcEEEEEEecCCCEEEEEEC-CCeEEEEEcC
Q psy7108          46 HEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD---TQHETIQLLSDALCVAYKPDGTEIVVATL-DGQLIMFDVE  121 (703)
Q Consensus        46 H~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~---~~~~~~~~~~~V~~v~~spdg~~las~s~-dg~I~vwd~~  121 (703)
                      |.+.|+.+...   -.+++.+++.||.++.|--..-.   -+.....|-..+.+++.+-+|..+++.+. |..++++|+.
T Consensus         8 hrd~i~hv~~t---ka~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvE   84 (558)
T KOG0882|consen    8 HRDVITHVFPT---KAKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVE   84 (558)
T ss_pred             ccceeeeEeee---hhheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEee
Confidence            78888887665   46899999999999999753311   12334457778899999999999999887 9999999998


Q ss_pred             CCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCC--CEEEE-EecCCcEEEEECCCCceEEEEEeccCCc
Q psy7108         122 SAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADG--SCILA-AGQSKYICIYSSREGILLKKFTITQNKS  198 (703)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg--~~l~s-~s~dg~I~lwD~~~~~~~~~~~~~~~~~  198 (703)
                      +-..+..++-..-                  .+.+ ++..++..  ..+++ .-.++.+.++|-....+...+.      
T Consensus        85 n~DminmiKL~~l------------------Pg~a-~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~f------  139 (558)
T KOG0882|consen   85 NFDMINMIKLVDL------------------PGFA-EWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYF------  139 (558)
T ss_pred             ccchhhhcccccC------------------CCce-EEecCCCCeeeeEEeecccCCCcEEECCcCCcCcccee------
Confidence            7655433332211                  0011 12223321  12333 3456889999987654321111      


Q ss_pred             cccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCC-Cc--------------cceeecCCccceEEEEEcCCC
Q psy7108         199 LDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKK-GD--------------MAARVLKPEVRVFCVKFSPTG  263 (703)
Q Consensus       199 ~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~-~~--------------~~~~~~~h~~~V~~l~~spdg  263 (703)
                      ..-|..+|..+.+.+.+...++....|      .|..|.... -+              .+..+........++.|+|+|
T Consensus       140 kklH~sPV~~i~y~qa~Ds~vSiD~~g------mVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g  213 (558)
T KOG0882|consen  140 KKLHFSPVKKIRYNQAGDSAVSIDISG------MVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDG  213 (558)
T ss_pred             cccccCceEEEEeeccccceeeccccc------eeEeecCCCcccCccccccccccccchhhcccccccCccceEEcccc
Confidence            122445888889999888776655443      788887662 11              111122334567899999999


Q ss_pred             CEEEEEeCCC-EEEEEcCCCceecceee
Q psy7108         264 QAWVAATTEG-VHIYSLDSGYVFDPFLL  290 (703)
Q Consensus       264 ~~l~s~s~Dg-v~iwd~~~~~~~~~~~~  290 (703)
                      ..+.+-+.|. |++++..+|...+.+..
T Consensus       214 ~qistl~~DrkVR~F~~KtGklvqeiDE  241 (558)
T KOG0882|consen  214 AQISTLNPDRKVRGFVFKTGKLVQEIDE  241 (558)
T ss_pred             CcccccCcccEEEEEEeccchhhhhhhc
Confidence            9999999998 99999999988766543

>KOG2114|consensus

Probab=97.92  E-value=0.00043  Score=77.07  Aligned_cols=208  Identities=16%  Similarity=0.162  Sum_probs=129.2

Q ss_pred             CeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCC-CEEEEEECCC-----eEEEEEcCC
Q psy7108          49 PVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDG-TEIVVATLDG-----QLIMFDVES  122 (703)
Q Consensus        49 ~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg-~~las~s~dg-----~I~vwd~~~  122 (703)
                      .|+|  |++  .+..+|.|+.||.|.+.+- .-+....+..+...+...-+.-++ ..|++.+.|+     .+++||++.
T Consensus        27 ~isc--~~s--~~~~vvigt~~G~V~~Ln~-s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek  101 (933)
T KOG2114|consen   27 AISC--CSS--STGSVVIGTADGRVVILNS-SFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEK  101 (933)
T ss_pred             ceeE--EcC--CCceEEEeeccccEEEecc-cceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccc
Confidence            4444  677  7899999999998877663 222224555566663333334344 6777777665     489999864


Q ss_pred             CcE---EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCcc
Q psy7108         123 AAQ---VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSL  199 (703)
Q Consensus       123 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~  199 (703)
                      .+.   ...+..|+-          ....++....++.+++.+.+-+.+|+|-.+|.|.++.-.   ..+.-.. ...-.
T Consensus       102 ~~~n~sP~c~~~~ri----------~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GD---i~RDrgs-r~~~~  167 (933)
T KOG2114|consen  102 VDKNNSPQCLYEHRI----------FTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGD---ILRDRGS-RQDYS  167 (933)
T ss_pred             cCCCCCcceeeeeee----------eccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCc---chhcccc-ceeee
Confidence            311   111111110          000111224478899999999999999999999988532   1111000 00001


Q ss_pred             ccccccceeeeeccCCCE-EEEEcccCCCCCeeEEECCCCCCCcc-ceeecCCccceEEEEEcCCCCEEEEEeCCCEEEE
Q psy7108         200 DGINDFINRRKMTEFGNV-SLIETRETHEGGNVVLKLPGVKKGDM-AARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIY  277 (703)
Q Consensus       200 ~~~~~~v~~~~~spdg~~-l~~~~~~~~~~~~~~i~iwd~~~~~~-~~~~~~h~~~V~~l~~spdg~~l~s~s~Dgv~iw  277 (703)
                      ....++|+.+++..+++. +++++..       .|.+|.+....+ ......|..++.|..+++....+++++...+.+|
T Consensus       168 ~~~~~pITgL~~~~d~~s~lFv~Tt~-------~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca~~e~l~fY  240 (933)
T KOG2114|consen  168 HRGKEPITGLALRSDGKSVLFVATTE-------QVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICAGSEFLYFY  240 (933)
T ss_pred             ccCCCCceeeEEecCCceeEEEEecc-------eeEEEEecCCCcceeeeccCCccceeeecCCCCccEEEecCceEEEE
Confidence            112468999999999987 3333432       688888773332 3446678888999999987776888887888899


Q ss_pred             EcCCC
Q psy7108         278 SLDSG  282 (703)
Q Consensus       278 d~~~~  282 (703)
                      +.+..
T Consensus       241 ~sd~~  245 (933)
T KOG2114|consen  241 DSDGR  245 (933)
T ss_pred             cCCCc
Confidence            87643

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=97.91  E-value=0.0023  Score=69.16  Aligned_cols=208  Identities=14%  Similarity=0.091  Sum_probs=115.4

Q ss_pred             CCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCC--
Q psy7108          60 SSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDS--  137 (703)
Q Consensus        60 dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~--  137 (703)
                      ++..++.++.|+.+..+|..+++...+.. ..+.+.+.... .+..++.++.++.+..||.++|+.+-..........  
T Consensus       104 ~~~~v~v~~~~g~l~ald~~tG~~~W~~~-~~~~~~~~p~v-~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~  181 (377)
T TIGR03300       104 DGGLVFVGTEKGEVIALDAEDGKELWRAK-LSSEVLSPPLV-ANGLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLR  181 (377)
T ss_pred             cCCEEEEEcCCCEEEEEECCCCcEeeeec-cCceeecCCEE-ECCEEEEECCCCeEEEEEcCCCceeeEEccCCCceeec
Confidence            56778888899999999998886654432 23333321111 245677778899999999999987665543221000  


Q ss_pred             --C-C----------CCCccchhhcccCCccEEEEE-----------------EcC--CCCEEEEEecCCcEEEEECCCC
Q psy7108         138 --G-R----------LDTDLVTREQSLKAKAVSTVC-----------------YSA--DGSCILAAGQSKYICIYSSREG  185 (703)
Q Consensus       138 --~-~----------~~~~~~~~~~~~~~~~V~~i~-----------------~sp--dg~~l~s~s~dg~I~lwD~~~~  185 (703)
                        . .          ........-....+..++...                 -+|  .+..+++++.++.+..+|.+++
T Consensus       182 ~~~sp~~~~~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~~tG  261 (377)
T TIGR03300       182 GSASPVIADGGVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVAALDLRSG  261 (377)
T ss_pred             CCCCCEEECCEEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEEECCEEEEEEcCCEEEEEECCCC
Confidence              0 0          000000000000000111000                 011  2346667777888899998888


Q ss_pred             ceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCcc-ceEEEEEcCCCC
Q psy7108         186 ILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEV-RVFCVKFSPTGQ  264 (703)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~-~V~~l~~spdg~  264 (703)
                      +.+-......          ....  ..++..+++.+.++      .+..+|..+++.+........ ...+...  .+.
T Consensus       262 ~~~W~~~~~~----------~~~p--~~~~~~vyv~~~~G------~l~~~d~~tG~~~W~~~~~~~~~~ssp~i--~g~  321 (377)
T TIGR03300       262 RVLWKRDASS----------YQGP--AVDDNRLYVTDADG------VVVALDRRSGSELWKNDELKYRQLTAPAV--VGG  321 (377)
T ss_pred             cEEEeeccCC----------ccCc--eEeCCEEEEECCCC------eEEEEECCCCcEEEccccccCCccccCEE--ECC
Confidence            7665443110          1111  12345555555432      688888888876544322111 1122222  366


Q ss_pred             EEEEEeCCC-EEEEEcCCCceeccee
Q psy7108         265 AWVAATTEG-VHIYSLDSGYVFDPFL  289 (703)
Q Consensus       265 ~l~s~s~Dg-v~iwd~~~~~~~~~~~  289 (703)
                      .+++++.+| +.++|..+++....+.
T Consensus       322 ~l~~~~~~G~l~~~d~~tG~~~~~~~  347 (377)
T TIGR03300       322 YLVVGDFEGYLHWLSREDGSFVARLK  347 (377)
T ss_pred             EEEEEeCCCEEEEEECCCCCEEEEEE
Confidence            888899999 9999999998765443

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>KOG3617|consensus

Probab=97.90  E-value=0.00019  Score=79.28  Aligned_cols=89  Identities=9%  Similarity=0.031  Sum_probs=70.5

Q ss_pred             ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEE
Q psy7108          28 VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIV  107 (703)
Q Consensus        28 v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~la  107 (703)
                      |.++-.+|++.  +-.+ -.-.+++++|+|  ..-.|++|-.-|.+.+|...+.+.-.....|..++..+.|||+|..++
T Consensus        43 VtIfadtGEPq--r~Vt-~P~hatSLCWHp--e~~vLa~gwe~g~~~v~~~~~~e~htv~~th~a~i~~l~wS~~G~~l~  117 (1416)
T KOG3617|consen   43 VTIFADTGEPQ--RDVT-YPVHATSLCWHP--EEFVLAQGWEMGVSDVQKTNTTETHTVVETHPAPIQGLDWSHDGTVLM  117 (1416)
T ss_pred             EEEEecCCCCC--cccc-cceehhhhccCh--HHHHHhhccccceeEEEecCCceeeeeccCCCCCceeEEecCCCCeEE
Confidence            44555677755  2221 122356799999  888888998889999999877766566667999999999999999999


Q ss_pred             EEECCCeEEEEEcC
Q psy7108         108 VATLDGQLIMFDVE  121 (703)
Q Consensus       108 s~s~dg~I~vwd~~  121 (703)
                      ++..-|.|.+|..+
T Consensus       118 t~d~~g~v~lwr~d  131 (1416)
T KOG3617|consen  118 TLDNPGSVHLWRYD  131 (1416)
T ss_pred             EcCCCceeEEEEee
Confidence            99999999999876

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=97.87  E-value=0.00013  Score=71.82  Aligned_cols=211  Identities=15%  Similarity=0.207  Sum_probs=131.5

Q ss_pred             cCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc-------------------e----------------------eEE
Q psy7108          48 GPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD-------------------T----------------------QHE   86 (703)
Q Consensus        48 ~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~-------------------~----------------------~~~   86 (703)
                      ..|..+.|........++..+.|++|++|.+....                   .                      ..+
T Consensus        86 EKin~I~w~~~t~r~hFLlstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~r  165 (460)
T COG5170          86 EKINAIEWFDDTGRNHFLLSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCR  165 (460)
T ss_pred             HHhhheeeecCCCcceEEEecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccce
Confidence            46888998762233466667789999999885431                   0                      001


Q ss_pred             Ee--cCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcE---EEEEeccccCCCCCCCCccchhhcccCCccEEEEEE
Q psy7108          87 TI--QLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQ---VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCY  161 (703)
Q Consensus        87 ~~--~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~  161 (703)
                      +.  .|.-.+.++.|..|...++++ .|-.|.+|+++-...   +..++.|.-               ..-..-|++..|
T Consensus       166 vyaNaH~yhiNSiS~NsD~et~lSa-DdLrINLWnl~i~D~sFnIVDiKP~nm---------------eeLteVItSaeF  229 (460)
T COG5170         166 VYANAHPYHINSISFNSDKETLLSA-DDLRINLWNLEIIDGSFNIVDIKPHNM---------------EELTEVITSAEF  229 (460)
T ss_pred             eccccceeEeeeeeecCchheeeec-cceeeeeccccccCCceEEEeccCccH---------------HHHHHHHhhccc
Confidence            11  244457788998888877776 577899998864321   112222210               001124788889


Q ss_pred             cCCC-CEEEEEecCCcEEEEECCCCceE----EEEE----eccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeE
Q psy7108         162 SADG-SCILAAGQSKYICIYSSREGILL----KKFT----ITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVV  232 (703)
Q Consensus       162 spdg-~~l~s~s~dg~I~lwD~~~~~~~----~~~~----~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~  232 (703)
                      +|.. ..+.-.+..|.|++-|++.....    +.+.    +-.........+.|..+.|++.|++++.-..       .+
T Consensus       230 hp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdy-------lt  302 (460)
T COG5170         230 HPEMCNVFMYSSSKGEIKLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDY-------LT  302 (460)
T ss_pred             CHhHcceEEEecCCCcEEehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEecc-------ce
Confidence            9954 55666777899999999954221    1111    1111112233457788899999999887554       48


Q ss_pred             EECCCCCCC-ccceeecCCc------------cce---EEEEEcCCCCEEEEEeCCC-EEEEEcCC
Q psy7108         233 LKLPGVKKG-DMAARVLKPE------------VRV---FCVKFSPTGQAWVAATTEG-VHIYSLDS  281 (703)
Q Consensus       233 i~iwd~~~~-~~~~~~~~h~------------~~V---~~l~~spdg~~l~s~s~Dg-v~iwd~~~  281 (703)
                      +++||.+.. .++.++.-|.            ..|   ..+.||.|.+.+.+|+... .-+|-+.+
T Consensus       303 vkiwDvnm~k~pikTi~~h~~l~~~l~d~YEnDaifdkFeisfSgd~~~v~sgsy~NNfgiyp~~s  368 (460)
T COG5170         303 VKIWDVNMAKNPIKTIPMHCDLMDELNDVYENDAIFDKFEISFSGDDKHVLSGSYSNNFGIYPTDS  368 (460)
T ss_pred             EEEEecccccCCceeechHHHHHHHHHhhhhccceeeeEEEEecCCcccccccccccceeeecccc
Confidence            999998865 3454443331            122   3578899999999998776 66665443

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=97.86  E-value=0.00036  Score=75.19  Aligned_cols=114  Identities=17%  Similarity=0.272  Sum_probs=82.7

Q ss_pred             eEEEEEcCCCCCCEEEEE----eCCCcE----EEEEcCCCcee---EEEecCCCcEEEEEEecCCCEEEEEECCCeEEEE
Q psy7108          50 VSCIEFSPVLSSTGMVSA----SWDKTV----KLWNAVETDTQ---HETIQLLSDALCVAYKPDGTEIVVATLDGQLIMF  118 (703)
Q Consensus        50 V~~l~~sp~~dg~~L~sg----s~Dg~V----~iWd~~~~~~~---~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vw  118 (703)
                      ..++.||-. +...+.|.    +.+|.+    .+|++...+..   .........|.|++++|+.+.++.|+.||+|.+|
T Consensus       208 Pl~~~Fs~~-~~~qi~tVE~s~s~~g~~~~d~ciYE~~r~klqrvsvtsipL~s~v~~ca~sp~E~kLvlGC~DgSiiLy  286 (545)
T PF11768_consen  208 PLDVEFSLN-QPYQIHTVEQSISVKGEPSADSCIYECSRNKLQRVSVTSIPLPSQVICCARSPSEDKLVLGCEDGSIILY  286 (545)
T ss_pred             cEEEEccCC-CCcEEEEEEEecCCCCCceeEEEEEEeecCceeEEEEEEEecCCcceEEecCcccceEEEEecCCeEEEE
Confidence            356677763 45555553    445544    36666544211   2234578899999999999999999999999999


Q ss_pred             EcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCc
Q psy7108         119 DVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGI  186 (703)
Q Consensus       119 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~  186 (703)
                      |...+..... +..-                     ..+.++|+|+|..+++|+..|.+.+||+.-+.
T Consensus       287 D~~~~~t~~~-ka~~---------------------~P~~iaWHp~gai~~V~s~qGelQ~FD~ALsp  332 (545)
T PF11768_consen  287 DTTRGVTLLA-KAEF---------------------IPTLIAWHPDGAIFVVGSEQGELQCFDMALSP  332 (545)
T ss_pred             EcCCCeeeee-eecc---------------------cceEEEEcCCCcEEEEEcCCceEEEEEeecCc
Confidence            9877643322 2211                     46889999999999999999999999987543

>KOG0882|consensus

Probab=97.83  E-value=0.00031  Score=72.61  Aligned_cols=220  Identities=15%  Similarity=0.121  Sum_probs=143.9

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeC-CCcEEEEEcCCCcee--EEEecCCCcEEEEEEecCC--CEEEEE-ECCCe
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASW-DKTVKLWNAVETDTQ--HETIQLLSDALCVAYKPDG--TEIVVA-TLDGQ  114 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~-Dg~V~iWd~~~~~~~--~~~~~~~~~V~~v~~spdg--~~las~-s~dg~  114 (703)
                      ..+..|-+.|.+++.+-  ++.++.|.+. |+.++++|+++-...  ..+....+.+.++ .+|..  ..++++ -.++.
T Consensus        47 KhFraHL~~I~sl~~S~--dg~L~~Sv~d~Dhs~KvfDvEn~DminmiKL~~lPg~a~wv-~skGd~~s~IAVs~~~sg~  123 (558)
T KOG0882|consen   47 KHFRAHLGVILSLAVSY--DGWLFRSVEDPDHSVKVFDVENFDMINMIKLVDLPGFAEWV-TSKGDKISLIAVSLFKSGK  123 (558)
T ss_pred             hhhHHHHHHHHhhhccc--cceeEeeccCcccceeEEEeeccchhhhcccccCCCceEEe-cCCCCeeeeEEeecccCCC
Confidence            55678999999999999  9999999877 999999999765422  1111122222221 12221  133333 34788


Q ss_pred             EEEEEcCCCc-EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCC-Cc-----e
Q psy7108         115 LIMFDVESAA-QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSRE-GI-----L  187 (703)
Q Consensus       115 I~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~-~~-----~  187 (703)
                      +.++|-.... +...+.+                   .|..+|.++.++|.+..+++....|.|.-|.... .+     .
T Consensus       124 i~VvD~~~d~~q~~~fkk-------------------lH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l  184 (558)
T KOG0882|consen  124 IFVVDGFGDFCQDGYFKK-------------------LHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNL  184 (558)
T ss_pred             cEEECCcCCcCccceecc-------------------cccCceEEEEeeccccceeeccccceeEeecCCCcccCccccc
Confidence            9999876443 2222222                   2345899999999999999998889999999873 11     1


Q ss_pred             EEEEEeccC-CccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC-----------------
Q psy7108         188 LKKFTITQN-KSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK-----------------  249 (703)
Q Consensus       188 ~~~~~~~~~-~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~-----------------  249 (703)
                      .-.++.... ...........++.|+|+|..+..-+.+      +.|++++.++|+.++.+..                 
T Consensus       185 ~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~D------rkVR~F~~KtGklvqeiDE~~t~~~~q~ks~y~l~~  258 (558)
T KOG0882|consen  185 NFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPD------RKVRGFVFKTGKLVQEIDEVLTDAQYQPKSPYGLMH  258 (558)
T ss_pred             cccccccchhhcccccccCccceEEccccCcccccCcc------cEEEEEEeccchhhhhhhccchhhhhccccccccce
Confidence            111110000 0011123456789999999988765543      6899999888866543321                 


Q ss_pred             ---------------Cc-cceEEEEEcCCCCEEEEEeCCCEEEEEcCCCceecce
Q psy7108         250 ---------------PE-VRVFCVKFSPTGQAWVAATTEGVHIYSLDSGYVFDPF  288 (703)
Q Consensus       250 ---------------h~-~~V~~l~~spdg~~l~s~s~Dgv~iwd~~~~~~~~~~  288 (703)
                                     |. ..-+.+.|...|++|+.++--||+|.++.++.+...+
T Consensus       259 VelgRRmaverelek~~~~~~~~~~fdes~~flly~t~~gikvin~~tn~v~ri~  313 (558)
T KOG0882|consen  259 VELGRRMAVERELEKHGSTVGTNAVFDESGNFLLYGTILGIKVINLDTNTVVRIL  313 (558)
T ss_pred             eehhhhhhHHhhHhhhcCcccceeEEcCCCCEEEeecceeEEEEEeecCeEEEEe
Confidence                           11 1134577888999999999999999999998876544

>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases

Probab=97.82  E-value=1.2e-06  Score=86.97  Aligned_cols=54  Identities=24%  Similarity=0.318  Sum_probs=45.0

Q ss_pred             hcccCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhh
Q psy7108         525 ELGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQ  581 (703)
Q Consensus       525 ~~g~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p  581 (703)
                      .....|+++.++.+++..+..++.++|||+||.+++.++++.|+   +++.++..+|
T Consensus        24 ~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~---~v~~lvl~~~   77 (230)
T PF00561_consen   24 DYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPE---RVKKLVLISP   77 (230)
T ss_dssp             THCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGG---GEEEEEEESE
T ss_pred             cccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCch---hhcCcEEEee
Confidence            66777889999999999888889999999999998888877666   6666666655

; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....

>KOG4714|consensus

Probab=97.80  E-value=8.6e-05  Score=71.46  Aligned_cols=205  Identities=10%  Similarity=0.093  Sum_probs=117.3

Q ss_pred             ccccCCCc-CeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCC-----------c-eeEEEecCCCcEEEEEEecCCCEEE
Q psy7108          41 EVLSGHEG-PVSCIEFSPVLSSTGMVSASWDKTVKLWNAVET-----------D-TQHETIQLLSDALCVAYKPDGTEIV  107 (703)
Q Consensus        41 ~~l~gH~~-~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~-----------~-~~~~~~~~~~~V~~v~~spdg~~la  107 (703)
                      ..+.+|.+ .|+.+.++-   ...|+++..++.+.......+           - +...+..+.++-.+-+.+--++.++
T Consensus        29 D~i~~~~d~~~~~~~~v~---~~~lf~~e~~~~~ss~g~~r~~~~~~~~rt~~i~~~~~~a~~sep~p~~~~s~~~t~V~  105 (319)
T KOG4714|consen   29 DEIMQHADVKLSKVSLSA---EYILFTGETSSQIISLGKGRGRCISLWERDDGIDPFKVLAKNSEIDPNDACTMTDNRVC  105 (319)
T ss_pred             hhcccccceEEEEeechh---hheeecccchhheeeeccceEEEechhhcccCcCceeeeeccCCCCCcccccccCCceE
Confidence            55555644 256666663   456677666655544332211           1 1122223333333333344467799


Q ss_pred             EEECCCeEEEEEcCCCcEE-EEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe-----cCCcEEEEE
Q psy7108         108 VATLDGQLIMFDVESAAQV-GSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG-----QSKYICIYS  181 (703)
Q Consensus       108 s~s~dg~I~vwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s-----~dg~I~lwD  181 (703)
                      ++..||.+.+.+.+.-..+ +.+....                   . .--+.++...++.+.++.     .-+..+.|+
T Consensus       106 ~~~~dg~~~v~s~~~~~~~~~~i~~~~-------------------~-~~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~  165 (319)
T KOG4714|consen  106 IGYADGSLAVFSTDKDLALMSRIPSIH-------------------S-GSASRKICRHGNSILSGGCGNWNAQDNFYANT  165 (319)
T ss_pred             ecCCCceEEEEechHHHhhhhhccccc-------------------c-cccccceeecccEEecCCcceEeeccceeeec
Confidence            9999999999987652111 1111000                   0 111222333344444432     123355555


Q ss_pred             CCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCc-cceeecCCccceEEEEEc
Q psy7108         182 SREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGD-MAARVLKPEVRVFCVKFS  260 (703)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~-~~~~~~~h~~~V~~l~~s  260 (703)
                      ++..   +++.... .    ....|.+++-+|..+.++..+.++     ..+-+||.++.. +...+..|+..++.+.|+
T Consensus       166 ~~p~---~t~~~~~-~----~~~~v~~l~~hp~qq~~v~cgt~d-----g~~~l~d~rn~~~p~S~l~ahk~~i~eV~FH  232 (319)
T KOG4714|consen  166 LDPI---KTLIPSK-K----ALDAVTALCSHPAQQHLVCCGTDD-----GIVGLWDARNVAMPVSLLKAHKAEIWEVHFH  232 (319)
T ss_pred             cccc---ccccccc-c----ccccchhhhCCcccccEEEEecCC-----CeEEEEEcccccchHHHHHHhhhhhhheecc
Confidence            5432   2222111 1    112488899999988877766553     478999998774 344566799999999999


Q ss_pred             CC-CCEEEEEeCCC-EEEEEcCC
Q psy7108         261 PT-GQAWVAATTEG-VHIYSLDS  281 (703)
Q Consensus       261 pd-g~~l~s~s~Dg-v~iwd~~~  281 (703)
                      |. +..|+++++|| +.-||..+
T Consensus       233 pk~p~~Lft~sedGslw~wdas~  255 (319)
T KOG4714|consen  233 PKNPEHLFTCSEDGSLWHWDAST  255 (319)
T ss_pred             CCCchheeEecCCCcEEEEcCCC
Confidence            94 67899999999 99999765

>KOG0309|consensus

Probab=97.79  E-value=8.9e-05  Score=80.66  Aligned_cols=199  Identities=12%  Similarity=0.184  Sum_probs=135.5

Q ss_pred             CcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCC--cEEEEEEecCCC--EEEEEECCCeEEEEEcCC
Q psy7108          47 EGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLS--DALCVAYKPDGT--EIVVATLDGQLIMFDVES  122 (703)
Q Consensus        47 ~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~--~V~~v~~spdg~--~las~s~dg~I~vwd~~~  122 (703)
                      .+++.++..+|  .|+-+|.++.-|. .+-|+.........+.|..  .|-.+.|+|...  +-++......-.+|++..
T Consensus        24 ~~~~~a~si~p--~grdi~lAsr~gl-~i~dld~p~~ppr~l~h~tpw~vad~qws~h~a~~~wiVsts~qkaiiwnlA~  100 (1081)
T KOG0309|consen   24 DGGFNAVSINP--SGRDIVLASRQGL-YIIDLDDPFTPPRWLHHITPWQVADVQWSPHPAKPYWIVSTSNQKAIIWNLAK  100 (1081)
T ss_pred             cCcccceeecc--ccchhhhhhhcCe-EEEeccCCCCCceeeeccCcchhcceecccCCCCceeEEecCcchhhhhhhhc
Confidence            56788999999  8999999988764 4557765544444444443  467788888653  445555566677888743


Q ss_pred             C--cEE-EEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCC-CEEEEEecCCcEEEEECCCCc-eEEEEEeccCC
Q psy7108         123 A--AQV-GSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADG-SCILAAGQSKYICIYSSREGI-LLKKFTITQNK  197 (703)
Q Consensus       123 ~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg-~~l~s~s~dg~I~lwD~~~~~-~~~~~~~~~~~  197 (703)
                      .  +.+ -.+.+                    |+..|+.+.|+|.. ..+++++-|..+..||+++-. ++..+..    
T Consensus       101 ss~~aIef~lhg--------------------hsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~----  156 (1081)
T KOG0309|consen  101 SSSNAIEFVLHG--------------------HSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSS----  156 (1081)
T ss_pred             CCccceEEEEec--------------------CccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeec----
Confidence            2  111 22333                    34589999999854 568889999999999999753 3333221    


Q ss_pred             ccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC-ccceeecCCccceEEEEEcCC-CCEEEEEeCCC-E
Q psy7108         198 SLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG-DMAARVLKPEVRVFCVKFSPT-GQAWVAATTEG-V  274 (703)
Q Consensus       198 ~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~-~~~~~~~~h~~~V~~l~~spd-g~~l~s~s~Dg-v  274 (703)
                          .......++|+-....+.+++.+      +.+.+||.+.| .++..+.+|...|..++|..- ...+.+++.|+ |
T Consensus       157 ----w~s~asqVkwnyk~p~vlasshg------~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tv  226 (1081)
T KOG0309|consen  157 ----WRSAASQVKWNYKDPNVLASSHG------NDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTV  226 (1081)
T ss_pred             ----ccccCceeeecccCcchhhhccC------CceEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCce
Confidence                12245667887655555544433      36999999877 466677788888999988753 34567888999 9


Q ss_pred             EEEEcCCC
Q psy7108         275 HIYSLDSG  282 (703)
Q Consensus       275 ~iwd~~~~  282 (703)
                      +.|+.+..
T Consensus       227 kfw~y~kS  234 (1081)
T KOG0309|consen  227 KFWDYSKS  234 (1081)
T ss_pred             eeeccccc
Confidence            99997653

>KOG1832|consensus

Probab=97.77  E-value=1.2e-05  Score=88.58  Aligned_cols=170  Identities=18%  Similarity=0.195  Sum_probs=125.3

Q ss_pred             EecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCC
Q psy7108          87 TIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGS  166 (703)
Q Consensus        87 ~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~  166 (703)
                      +..+...-+|++|+-+.+.|++|+..|.|+++++.+|.......+|..                    .|+.+.-+.||.
T Consensus      1097 frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~S--------------------avT~vePs~dgs 1156 (1516)
T KOG1832|consen 1097 FRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQS--------------------AVTLVEPSVDGS 1156 (1516)
T ss_pred             hhccccceeeEEeecCCceEEeeeccceEEEEEccCcccccccccccc--------------------ccccccccCCcc
Confidence            345778899999999999999999999999999999998888888765                    889998888998


Q ss_pred             EEEEEecCC--cEEEEECCC-CceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcc
Q psy7108         167 CILAAGQSK--YICIYSSRE-GILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDM  243 (703)
Q Consensus       167 ~l~s~s~dg--~I~lwD~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~  243 (703)
                      .+++.+.-.  -..+|++.+ +....+|.            .-.++.|+..-+.-++++..+      ...+||+.++..
T Consensus      1157 ~~Ltsss~S~PlsaLW~~~s~~~~~Hsf~------------ed~~vkFsn~~q~r~~gt~~d------~a~~YDvqT~~~ 1218 (1516)
T KOG1832|consen 1157 TQLTSSSSSSPLSALWDASSTGGPRHSFD------------EDKAVKFSNSLQFRALGTEAD------DALLYDVQTCSP 1218 (1516)
T ss_pred             eeeeeccccCchHHHhccccccCcccccc------------ccceeehhhhHHHHHhccccc------ceEEEecccCcH
Confidence            887755433  478999875 44555554            234577777766666666543      588999999987


Q ss_pred             ceeecC----CccceEEEEEcCCCCEEEEEeCCCEEEEEcCCCceeccee-----eeEEEccch
Q psy7108         244 AARVLK----PEVRVFCVKFSPTGQAWVAATTEGVHIYSLDSGYVFDPFL-----LDISITPQS  298 (703)
Q Consensus       244 ~~~~~~----h~~~V~~l~~spdg~~l~s~s~Dgv~iwd~~~~~~~~~~~-----~~~~~spd~  298 (703)
                      +.++..    .+..=+...|||+...+.-   || .+||+...+.+..|.     ..-.|+|.|
T Consensus      1219 l~tylt~~~~~~y~~n~a~FsP~D~LIln---dG-vLWDvR~~~aIh~FD~ft~~~~G~FHP~g 1278 (1516)
T KOG1832|consen 1219 LQTYLTDTVTSSYSNNLAHFSPCDTLILN---DG-VLWDVRIPEAIHRFDQFTDYGGGGFHPSG 1278 (1516)
T ss_pred             HHHhcCcchhhhhhccccccCCCcceEee---Cc-eeeeeccHHHHhhhhhheecccccccCCC
Confidence            766432    2233467889999987763   44 589998776655543     234677777

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=97.73  E-value=0.0059  Score=60.26  Aligned_cols=172  Identities=13%  Similarity=0.091  Sum_probs=107.3

Q ss_pred             cCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEec-------CCCcEEEEEEecCC------CEEEEEECCCe
Q psy7108          48 GPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQ-------LLSDALCVAYKPDG------TEIVVATLDGQ  114 (703)
Q Consensus        48 ~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~-------~~~~V~~v~~spdg------~~las~s~dg~  114 (703)
                      -.=+.++|||  |+.+||.+...|+|+++|+... .+..+..       ....|..+.|.+-.      ..|++-..+|.
T Consensus        44 PQWRkl~WSp--D~tlLa~a~S~G~i~vfdl~g~-~lf~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~  120 (282)
T PF15492_consen   44 PQWRKLAWSP--DCTLLAYAESTGTIRVFDLMGS-ELFVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQ  120 (282)
T ss_pred             chheEEEECC--CCcEEEEEcCCCeEEEEecccc-eeEEcCcccccCCccccceeeeEeeccccccccceeEEEEeccce
Confidence            3457799999  9999999999999999998654 3322211       23456667775421      24666677888


Q ss_pred             EEEEEcCCC-----cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC----C-------cEE
Q psy7108         115 LIMFDVESA-----AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS----K-------YIC  178 (703)
Q Consensus       115 I~vwd~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d----g-------~I~  178 (703)
                      ++-|-+..+     +...++.....                 ....|.++.|+|..+.|++|+..    +       -+.
T Consensus       121 L~Sy~vs~gt~q~y~e~hsfsf~~~-----------------yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~a~~~GLt  183 (282)
T PF15492_consen  121 LRSYLVSVGTNQGYQENHSFSFSSH-----------------YPHGINSAVYHPKHRLLLVGGCEQNQDGMSKASSCGLT  183 (282)
T ss_pred             eeeEEEEcccCCcceeeEEEEeccc-----------------CCCceeEEEEcCCCCEEEEeccCCCCCccccccccCce
Confidence            877765322     22333332111                 13479999999999888876531    1       256


Q ss_pred             EEECCCCceEEEEEecc--C------------------Cc-cccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCC
Q psy7108         179 IYSSREGILLKKFTITQ--N------------------KS-LDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPG  237 (703)
Q Consensus       179 lwD~~~~~~~~~~~~~~--~------------------~~-~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd  237 (703)
                      .|.+-++.+-.......  .                  .. .....+.|..+..||||+.+++....|      .|.+|+
T Consensus       184 aWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~~~~~d~i~kmSlSPdg~~La~ih~sG------~lsLW~  257 (282)
T PF15492_consen  184 AWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFKFFSRQGQEQDGIFKMSLSPDGSLLACIHFSG------SLSLWE  257 (282)
T ss_pred             EEEEcCCCCcEEEccccCccccccccccceeeccceeeeeccccCCCceEEEEECCCCCEEEEEEcCC------eEEEEe
Confidence            66654432211110000  0                  00 011346788999999999999888775      899999


Q ss_pred             CCCCccce
Q psy7108         238 VKKGDMAA  245 (703)
Q Consensus       238 ~~~~~~~~  245 (703)
                      +.+-.+..
T Consensus       258 iPsL~~~~  265 (282)
T PF15492_consen  258 IPSLRLQR  265 (282)
T ss_pred             cCcchhhc
Confidence            87655443

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=97.71  E-value=0.0032  Score=62.97  Aligned_cols=181  Identities=15%  Similarity=0.154  Sum_probs=110.4

Q ss_pred             CCcEEEEEcCCCceeEEEecC--CCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchh
Q psy7108          70 DKTVKLWNAVETDTQHETIQL--LSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTR  147 (703)
Q Consensus        70 Dg~V~iWd~~~~~~~~~~~~~--~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (703)
                      +|+|..||..+++.+.+..-.  .....+. ..+++..+++++.++.|..||..+|+.+........+.           
T Consensus         2 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~~~-----------   69 (238)
T PF13360_consen    2 DGTLSALDPRTGKELWSYDLGPGIGGPVAT-AVPDGGRVYVASGDGNLYALDAKTGKVLWRFDLPGPIS-----------   69 (238)
T ss_dssp             TSEEEEEETTTTEEEEEEECSSSCSSEEET-EEEETTEEEEEETTSEEEEEETTTSEEEEEEECSSCGG-----------
T ss_pred             CCEEEEEECCCCCEEEEEECCCCCCCccce-EEEeCCEEEEEcCCCEEEEEECCCCCEEEEeecccccc-----------
Confidence            688999999888766655321  1222222 33356778888899999999999999887776533210           


Q ss_pred             hcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEE-EeccCCccccccccceeeeeccCCCEEEEEcccCC
Q psy7108         148 EQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKF-TITQNKSLDGINDFINRRKMTEFGNVSLIETRETH  226 (703)
Q Consensus       148 ~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~  226 (703)
                            ..   .  ..++..+++++.++.+..+|..+|+.+... ..... ...    .........++..++++...+ 
T Consensus        70 ------~~---~--~~~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~g-  132 (238)
T PF13360_consen   70 ------GA---P--VVDGGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSP-PAG----VRSSSSPAVDGDRLYVGTSSG-  132 (238)
T ss_dssp             ------SG---E--EEETTEEEEEETTSEEEEEETTTSCEEEEEEE-SSC-TCS----TB--SEEEEETTEEEEEETCS-
T ss_pred             ------ce---e--eecccccccccceeeeEecccCCcceeeeecccccc-ccc----cccccCceEecCEEEEEeccC-
Confidence                  01   1  223556777778889999999999998774 32211 010    112223333366666666442 


Q ss_pred             CCCeeEEECCCCCCCccceeecCCccc----------eEEEEEcCCCCEEEEEeCCC-EEEEEcCCCcee
Q psy7108         227 EGGNVVLKLPGVKKGDMAARVLKPEVR----------VFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVF  285 (703)
Q Consensus       227 ~~~~~~i~iwd~~~~~~~~~~~~h~~~----------V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~  285 (703)
                           .+..+|.++|+.+.........          +.+-....++ .+..++.++ +.-+|+.+++..
T Consensus       133 -----~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~g~~~~~d~~tg~~~  196 (238)
T PF13360_consen  133 -----KLVALDPKTGKLLWKYPVGEPRGSSPISSFSDINGSPVISDG-RVYVSSGDGRVVAVDLATGEKL  196 (238)
T ss_dssp             -----EEEEEETTTTEEEEEEESSTT-SS--EEEETTEEEEEECCTT-EEEEECCTSSEEEEETTTTEEE
T ss_pred             -----cEEEEecCCCcEEEEeecCCCCCCcceeeecccccceEEECC-EEEEEcCCCeEEEEECCCCCEE
Confidence                 7899999999876655443211          1122222344 677777777 443399998743

...

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=97.70  E-value=0.00067  Score=73.15  Aligned_cols=76  Identities=24%  Similarity=0.315  Sum_probs=64.4

Q ss_pred             CCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCc
Q psy7108          45 GHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAA  124 (703)
Q Consensus        45 gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~  124 (703)
                      .....|.|++++|  +.+.|+.|+.||+|.+||...+  ........-.++.++|+|+|..+++|+..|.+.+||+.-..
T Consensus       257 pL~s~v~~ca~sp--~E~kLvlGC~DgSiiLyD~~~~--~t~~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALsp  332 (545)
T PF11768_consen  257 PLPSQVICCARSP--SEDKLVLGCEDGSIILYDTTRG--VTLLAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALSP  332 (545)
T ss_pred             ecCCcceEEecCc--ccceEEEEecCCeEEEEEcCCC--eeeeeeecccceEEEEcCCCcEEEEEcCCceEEEEEeecCc
Confidence            4677899999999  9999999999999999998665  33334455567889999999999999999999999986543

>KOG3621|consensus

Probab=97.68  E-value=0.00029  Score=76.83  Aligned_cols=122  Identities=10%  Similarity=0.065  Sum_probs=88.8

Q ss_pred             CCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEec-CCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCc
Q psy7108          46 HEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQ-LLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAA  124 (703)
Q Consensus        46 H~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~-~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~  124 (703)
                      |...|.--+++.  .+++++.|+.-|.+.+++-..+........ ..+.+.....+++..++|.|+..|.|.++-+..+.
T Consensus        32 ~~~~v~lTc~ds--t~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~  109 (726)
T KOG3621|consen   32 FPARVKLTCVDA--TEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKEL  109 (726)
T ss_pred             CcceEEEEEeec--CCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccC
Confidence            455666666777  789999999999999999766643333222 33345557788888899999999999999887643


Q ss_pred             EEEE-EeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCC
Q psy7108         125 QVGS-VEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSRE  184 (703)
Q Consensus       125 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~  184 (703)
                      .... +-.+.+               ..|+..|++++|++|+..+.+|...|.|.+-.+.+
T Consensus       110 p~~~~~~t~~d---------------~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s  155 (726)
T KOG3621|consen  110 PRDLDYVTPCD---------------KSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS  155 (726)
T ss_pred             CCcceeecccc---------------ccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence            2111 111111               12566899999999999999999999998887776

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=97.67  E-value=0.013  Score=58.60  Aligned_cols=214  Identities=12%  Similarity=0.128  Sum_probs=107.1

Q ss_pred             cccCCCcCeEEEEEcCCCCCC-EEEEEeCCCcEEEEEcCCCceeEEE-ecCCCcEEEEEEecCCCEEEEEECCCeEEEEE
Q psy7108          42 VLSGHEGPVSCIEFSPVLSST-GMVSASWDKTVKLWNAVETDTQHET-IQLLSDALCVAYKPDGTEIVVATLDGQLIMFD  119 (703)
Q Consensus        42 ~l~gH~~~V~~l~~sp~~dg~-~L~sgs~Dg~V~iWd~~~~~~~~~~-~~~~~~V~~v~~spdg~~las~s~dg~I~vwd  119 (703)
                      .+.+-.+.+++++|+|  +.+ +++.....+.|...+. +++.+... +...+..-.+++.-++.++++.-.++.+.+++
T Consensus        16 ~l~g~~~e~SGLTy~p--d~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~   92 (248)
T PF06977_consen   16 PLPGILDELSGLTYNP--DTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFT   92 (248)
T ss_dssp             E-TT--S-EEEEEEET--TTTEEEEEETTTTEEEEEET-T--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEE
T ss_pred             ECCCccCCccccEEcC--CCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEE
Confidence            4456566799999999  655 5555666777776775 34444333 22346788999988787766665689999998


Q ss_pred             cCCCc---EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCC---CceEEEEEe
Q psy7108         120 VESAA---QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSRE---GILLKKFTI  193 (703)
Q Consensus       120 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~---~~~~~~~~~  193 (703)
                      +....   .........-            .....+...+..++|+|.++.|+++-......+|.++.   ...+.....
T Consensus        93 ~~~~~~~~~~~~~~~~~l------------~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~  160 (248)
T PF06977_consen   93 IDDDTTSLDRADVQKISL------------GFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDD  160 (248)
T ss_dssp             E----TT--EEEEEEEE---------------S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-
T ss_pred             EeccccccchhhceEEec------------ccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccc
Confidence            84321   1111111000            00012344789999999988888887776677776654   222222111


Q ss_pred             ccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeec--C-C------ccceEEEEEcCCCC
Q psy7108         194 TQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL--K-P------EVRVFCVKFSPTGQ  264 (703)
Q Consensus       194 ~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~--~-h------~~~V~~l~~spdg~  264 (703)
                      ..-.........+..++++|....+++-+..+     +.+...| .+|+.+....  . .      -.....|+|.++|+
T Consensus       161 ~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es-----~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~  234 (248)
T PF06977_consen  161 QDLDDDKLFVRDLSGLSYDPRTGHLLILSDES-----RLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGN  234 (248)
T ss_dssp             HHHH-HT--SS---EEEEETTTTEEEEEETTT-----TEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--
T ss_pred             cccccccceeccccceEEcCCCCeEEEEECCC-----CeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCC
Confidence            11000111223467788888866555544432     4677777 4555443322  1 1      13478899999996


Q ss_pred             EEEEEeCCC-EEEE
Q psy7108         265 AWVAATTEG-VHIY  277 (703)
Q Consensus       265 ~l~s~s~Dg-v~iw  277 (703)
                      ..+ .++-. .++|
T Consensus       235 LYI-vsEpNlfy~f  247 (248)
T PF06977_consen  235 LYI-VSEPNLFYRF  247 (248)
T ss_dssp             EEE-EETTTEEEEE
T ss_pred             EEE-EcCCceEEEe
Confidence            544 44555 4444

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=97.65  E-value=0.0053  Score=65.60  Aligned_cols=245  Identities=16%  Similarity=0.174  Sum_probs=130.8

Q ss_pred             cccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEec-CC-----------------CcEEEEEEecCC
Q psy7108          42 VLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQ-LL-----------------SDALCVAYKPDG  103 (703)
Q Consensus        42 ~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~-~~-----------------~~V~~v~~spdg  103 (703)
                      .+......+....|||  +|+.++... ++.|.+++..++.. .++.. ..                 +.-..+.|||||
T Consensus        37 ~l~~~~~~~~~~~~sP--~g~~~~~v~-~~nly~~~~~~~~~-~~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~  112 (353)
T PF00930_consen   37 PLTPPPPKLQDAKWSP--DGKYIAFVR-DNNLYLRDLATGQE-TQLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDS  112 (353)
T ss_dssp             ESS-EETTBSEEEE-S--SSTEEEEEE-TTEEEEESSTTSEE-EESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTS
T ss_pred             ECcCCccccccceeec--CCCeeEEEe-cCceEEEECCCCCe-EEeccccceeEEcCccceeccccccccccceEECCCC
Confidence            3333367889999999  999999886 47899998877633 22222 11                 122468899999


Q ss_pred             CEEEEEECC-CeEEEEE---cCCCc----EEEEEecccc-------------CCCCCCCCccchhhcccCCccEEEEEEc
Q psy7108         104 TEIVVATLD-GQLIMFD---VESAA----QVGSVEARRD-------------LDSGRLDTDLVTREQSLKAKAVSTVCYS  162 (703)
Q Consensus       104 ~~las~s~d-g~I~vwd---~~~~~----~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~V~~i~~s  162 (703)
                      ++||....| ..|..+.   .....    ....+.-...             +..+....-............+..+.|.
T Consensus       113 ~~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~  192 (353)
T PF00930_consen  113 KYLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRVSLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWS  192 (353)
T ss_dssp             SEEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EEEEEEEESSSTCCCEE---HHHHTSSEEEEEEEEE
T ss_pred             CEEEEEEECCcCCceEEeeccCCccccCCcccccccCCCCCcCCceEEEEEECCCCcEEEeeeccccCCCccCcccceec
Confidence            999887654 3333332   22221    1222221100             0000000000000112235578999999


Q ss_pred             CCCCEEEE--EecCC---cEEEEECCCCceEEEEEeccCCccccccccceeeeec-cCCCEEEEEcccCCCCCeeEEECC
Q psy7108         163 ADGSCILA--AGQSK---YICIYSSREGILLKKFTITQNKSLDGINDFINRRKMT-EFGNVSLIETRETHEGGNVVLKLP  236 (703)
Q Consensus       163 pdg~~l~s--~s~dg---~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-pdg~~l~~~~~~~~~~~~~~i~iw  236 (703)
                      ++++.++.  .+++.   .+.++|..++.+.........    +.-..-....+. +++..++..+..   +|...|.+.
T Consensus       193 ~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~----~Wv~~~~~~~~~~~~~~~~l~~s~~---~G~~hly~~  265 (353)
T PF00930_consen  193 PDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETSD----GWVDVYDPPHFLGPDGNEFLWISER---DGYRHLYLY  265 (353)
T ss_dssp             ETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEESS----SSSSSSSEEEE-TTTSSEEEEEEET---TSSEEEEEE
T ss_pred             CCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEecCC----cceeeecccccccCCCCEEEEEEEc---CCCcEEEEE
Confidence            99984444  34433   477889988766555443332    222223345554 777766655542   235688888


Q ss_pred             CCCCCccceeecCCccceEE-EEEcCCCCEE-EEEeCCC---EEEE--EcC-CCcee--cce--e-eeEEEccch
Q psy7108         237 GVKKGDMAARVLKPEVRVFC-VKFSPTGQAW-VAATTEG---VHIY--SLD-SGYVF--DPF--L-LDISITPQS  298 (703)
Q Consensus       237 d~~~~~~~~~~~~h~~~V~~-l~~spdg~~l-~s~s~Dg---v~iw--d~~-~~~~~--~~~--~-~~~~~spd~  298 (703)
                      +...+... .+......|.. +.++++++.+ .++..++   -.+|  +++ .+...  ...  . .++.|||++
T Consensus       266 ~~~~~~~~-~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~~~~~LT~~~~~~~~~~~Spdg  339 (353)
T PF00930_consen  266 DLDGGKPR-QLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSGGEPKCLTCEDGDHYSASFSPDG  339 (353)
T ss_dssp             ETTSSEEE-ESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTETTEEEESSTTSSTTEEEEE-TTS
T ss_pred             ccccccee-ccccCceeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCCCCeEeccCCCCCceEEEECCCC
Confidence            88777644 45555666755 6788988876 4555432   3444  455 33321  111  1 368888887

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=97.64  E-value=0.0035  Score=67.71  Aligned_cols=188  Identities=18%  Similarity=0.154  Sum_probs=110.4

Q ss_pred             CCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEE-EEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCC
Q psy7108          60 SSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDAL-CVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSG  138 (703)
Q Consensus        60 dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~-~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~  138 (703)
                      .+..++.++.+|.+..+|..+++...+..-. ..+. ...  .++..+++++.++.+..+|.++|+.+-......     
T Consensus        64 ~~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~-~~~~~~p~--v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~-----  135 (377)
T TIGR03300        64 AGGKVYAADADGTVVALDAETGKRLWRVDLD-ERLSGGVG--ADGGLVFVGTEKGEVIALDAEDGKELWRAKLSS-----  135 (377)
T ss_pred             ECCEEEEECCCCeEEEEEccCCcEeeeecCC-CCcccceE--EcCCEEEEEcCCCEEEEEECCCCcEeeeeccCc-----
Confidence            4568888888999999999888655443322 2222 222  246778888899999999999998876544321     


Q ss_pred             CCCCccchhhcccCCccEEE-EEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCC-ccccccccceeeeeccCCC
Q psy7108         139 RLDTDLVTREQSLKAKAVST-VCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNK-SLDGINDFINRRKMTEFGN  216 (703)
Q Consensus       139 ~~~~~~~~~~~~~~~~~V~~-i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~spdg~  216 (703)
                                      .+.+ ...  .+..++.++.++.+..+|.++|+.+-++...... ...+    ..+.... ++ 
T Consensus       136 ----------------~~~~~p~v--~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~----~~sp~~~-~~-  191 (377)
T TIGR03300       136 ----------------EVLSPPLV--ANGLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRG----SASPVIA-DG-  191 (377)
T ss_pred             ----------------eeecCCEE--ECCEEEEECCCCeEEEEEcCCCceeeEEccCCCceeecC----CCCCEEE-CC-
Confidence                            1111 111  2456777888999999999999887666532210 0000    0111111 22 


Q ss_pred             EEEEEcccCCCCCeeEEECCCCCCCccceeecCC--c-----cceEEEEEcC--CCCEEEEEeCCC-EEEEEcCCCcee
Q psy7108         217 VSLIETRETHEGGNVVLKLPGVKKGDMAARVLKP--E-----VRVFCVKFSP--TGQAWVAATTEG-VHIYSLDSGYVF  285 (703)
Q Consensus       217 ~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h--~-----~~V~~l~~sp--dg~~l~s~s~Dg-v~iwd~~~~~~~  285 (703)
                      .++++..++      .+..+|.++|+........  .     .....+.-+|  .+..+++++.+| +..+|..+|+..
T Consensus       192 ~v~~~~~~g------~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~~tG~~~  264 (377)
T TIGR03300       192 GVLVGFAGG------KLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVAALDLRSGRVL  264 (377)
T ss_pred             EEEEECCCC------EEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEEECCEEEEEEcCCEEEEEECCCCcEE
Confidence            444444332      5667777777654322110  0     0000111111  245777777788 999999988764

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases

Probab=97.62  E-value=2.2e-05  Score=77.79  Aligned_cols=60  Identities=22%  Similarity=0.255  Sum_probs=54.3

Q ss_pred             eeeeeeeeecchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccc
Q psy7108         602 ALNIFQVGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS  664 (703)
Q Consensus       602 ~~s~~e~~~~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~  664 (703)
                      ...+.++...|+++.++.+++..+.++++++|||+||++++.++..+|+   +|+.+++++|+
T Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~---~v~~lvl~~~~   78 (230)
T PF00561_consen   19 DPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPE---RVKKLVLISPP   78 (230)
T ss_dssp             GSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGG---GEEEEEEESES
T ss_pred             cCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCch---hhcCcEEEeee
Confidence            3456777889999999999999999999999999999999999999888   78889988886

; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....

>KOG2114|consensus

Probab=97.59  E-value=0.0073  Score=67.66  Aligned_cols=201  Identities=14%  Similarity=0.118  Sum_probs=120.4

Q ss_pred             ecccCCceEEecCCceeec--cCCCccccccccCCCcC-eEEEEEcCCCCCCEEEEEeCCCc-----EEEEEcCCCc---
Q psy7108          14 ETHEGGNVVLKLPGVKKGD--MAARVLKPEVLSGHEGP-VSCIEFSPVLSSTGMVSASWDKT-----VKLWNAVETD---   82 (703)
Q Consensus        14 ~~~~~~~~~i~~~~v~~~d--~tg~~~~~~~l~gH~~~-V~~l~~sp~~dg~~L~sgs~Dg~-----V~iWd~~~~~---   82 (703)
                      ++..++.+++.-.+.+++-  ..-+.+  +-+..+... |..+-...  +..+|++.+.|+.     +++|+++..+   
T Consensus        31 ~~s~~~~vvigt~~G~V~~Ln~s~~~~--~~fqa~~~siv~~L~~~~--~~~~L~sv~Ed~~~np~llkiw~lek~~~n~  106 (933)
T KOG2114|consen   31 CSSSTGSVVIGTADGRVVILNSSFQLI--RGFQAYEQSIVQFLYILN--KQNFLFSVGEDEQGNPVLLKIWDLEKVDKNN  106 (933)
T ss_pred             EcCCCceEEEeeccccEEEecccceee--ehheecchhhhhHhhccc--CceEEEEEeecCCCCceEEEEecccccCCCC
Confidence            3344444555544444443  233343  566677766 44444333  4478888877754     7999986431   


Q ss_pred             --eeE---EEec-----CCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcE--EEEEeccccCCCCCCCCccchhhcc
Q psy7108          83 --TQH---ETIQ-----LLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQ--VGSVEARRDLDSGRLDTDLVTREQS  150 (703)
Q Consensus        83 --~~~---~~~~-----~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  150 (703)
                        .+.   ....     ...++.+++.+.+-+.+|+|-.+|.|..+.-+-.+.  .+.--.|.                 
T Consensus       107 sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~-----------------  169 (933)
T KOG2114|consen  107 SPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHR-----------------  169 (933)
T ss_pred             CcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeecc-----------------
Confidence              111   2233     245688899999999999999999999885321111  11111111                 


Q ss_pred             cCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceE-EEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCC
Q psy7108         151 LKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILL-KKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGG  229 (703)
Q Consensus       151 ~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~  229 (703)
                       .+.+|+.+++..+++.++.+..-..|.+|.+....+. ..+.        .+...++|.++++....++++.+.     
T Consensus       170 -~~~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~gr~p~~~~ld--------~~G~~lnCss~~~~t~qfIca~~e-----  235 (933)
T KOG2114|consen  170 -GKEPITGLALRSDGKSVLFVATTEQVMLYSLSGRTPSLKVLD--------NNGISLNCSSFSDGTYQFICAGSE-----  235 (933)
T ss_pred             -CCCCceeeEEecCCceeEEEEecceeEEEEecCCCcceeeec--------cCCccceeeecCCCCccEEEecCc-----
Confidence             2448999999999987443344467999998844422 2222        233477888888776656665554     


Q ss_pred             eeEEECCCCCCCccceeec-CCc
Q psy7108         230 NVVLKLPGVKKGDMAARVL-KPE  251 (703)
Q Consensus       230 ~~~i~iwd~~~~~~~~~~~-~h~  251 (703)
                        .+.+||.........+. +|.
T Consensus       236 --~l~fY~sd~~~~cfaf~~g~k  256 (933)
T KOG2114|consen  236 --FLYFYDSDGRGPCFAFEVGEK  256 (933)
T ss_pred             --eEEEEcCCCcceeeeecCCCe
Confidence              58999877554444444 443

>KOG4714|consensus

Probab=97.55  E-value=0.00042  Score=66.85  Aligned_cols=129  Identities=16%  Similarity=0.239  Sum_probs=82.4

Q ss_pred             cCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeE-EEecCCCcEEEEEEecC-CCEEEEEECCCeEEEEEcCCCcE
Q psy7108          48 GPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQH-ETIQLLSDALCVAYKPD-GTEIVVATLDGQLIMFDVESAAQ  125 (703)
Q Consensus        48 ~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~-~~~~~~~~V~~v~~spd-g~~las~s~dg~I~vwd~~~~~~  125 (703)
                      ..|++++-+|. ..+.+++|+.||.+-+||.+....+. .+..|+.++..+-|+|. +..|++++.||.+..||..+ +.
T Consensus       180 ~~v~~l~~hp~-qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~-~~  257 (319)
T KOG4714|consen  180 DAVTALCSHPA-QQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST-TF  257 (319)
T ss_pred             ccchhhhCCcc-cccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCC-ce
Confidence            34999999994 56677888999999999998764433 34459999999999995 57899999999999999875 33


Q ss_pred             EEEEeccccCCCCCCCCccchh------hcccCCccEEEEEEcCCCCEEEEEecCCcEEEEE
Q psy7108         126 VGSVEARRDLDSGRLDTDLVTR------EQSLKAKAVSTVCYSADGSCILAAGQSKYICIYS  181 (703)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD  181 (703)
                      +. ..............+....      ..+.....|+++..  -|..|++|+.-+.|++++
T Consensus       258 l~-i~~~~s~~s~WLsgD~v~s~i~i~~ll~~~~~SinsfDV--~g~~lVcgtd~eaIyl~~  316 (319)
T KOG4714|consen  258 LS-ISNQASVISSWLSGDPVKSRIEITSLLPSRSLSINSFDV--LGPCLVCGTDAEAIYLTR  316 (319)
T ss_pred             EE-ecCccccccccccCCcccceEeeeccccccceeeeeeec--cCceEEeccccceEEEec
Confidence            32 2211111111111111111      11111223433333  367788887777777765

>KOG1920|consensus

Probab=97.52  E-value=0.014  Score=67.81  Aligned_cols=189  Identities=15%  Similarity=0.201  Sum_probs=119.7

Q ss_pred             CCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEE
Q psy7108          91 LSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILA  170 (703)
Q Consensus        91 ~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s  170 (703)
                      .+.|.++.|..++..++.+..+|.|.+-|..+......-..                     ...|.+++||||++.++.
T Consensus        68 d~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~eivg~v---------------------d~GI~aaswS~Dee~l~l  126 (1265)
T KOG1920|consen   68 DDEIVSVQFLADTNSICVITALGDIILVDPETLELEIVGNV---------------------DNGISAASWSPDEELLAL  126 (1265)
T ss_pred             CcceEEEEEecccceEEEEecCCcEEEEcccccceeeeeec---------------------cCceEEEeecCCCcEEEE
Confidence            35899999999999999999999999998877643221111                     127999999999999999


Q ss_pred             EecCCcEEEEECC----C-------------------CceEEEEEeccCCc----------ccc---ccccceeeeeccC
Q psy7108         171 AGQSKYICIYSSR----E-------------------GILLKKFTITQNKS----------LDG---INDFINRRKMTEF  214 (703)
Q Consensus       171 ~s~dg~I~lwD~~----~-------------------~~~~~~~~~~~~~~----------~~~---~~~~v~~~~~spd  214 (703)
                      .+.++++.+-+-.    .                   |+....|.+..++.          ..+   ..+.-+++.|-.|
T Consensus       127 iT~~~tll~mT~~f~~i~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgD  206 (1265)
T KOG1920|consen  127 ITGRQTLLFMTKDFEPIAEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGD  206 (1265)
T ss_pred             EeCCcEEEEEeccccchhccccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccC
Confidence            8887777654321    0                   11111222222100          001   1223456899999


Q ss_pred             CCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeC---CC-EEEEEcCCCceecce--
Q psy7108         215 GNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATT---EG-VHIYSLDSGYVFDPF--  288 (703)
Q Consensus       215 g~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~---Dg-v~iwd~~~~~~~~~~--  288 (703)
                      |++++++.-.. ..+.+.+++||.. |..-.......+-=.+++|-|.|..+++...   |+ |.+|..+ |-.+..+  
T Consensus       207 g~~fAVs~~~~-~~~~RkirV~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErN-GL~hg~f~l  283 (1265)
T KOG1920|consen  207 GEYFAVSFVES-ETGTRKIRVYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERN-GLRHGEFVL  283 (1265)
T ss_pred             CcEEEEEEEec-cCCceeEEEeccc-chhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecC-Ccccccccc
Confidence            99988865432 2333789999977 5433322333344467999999999987543   44 8888754 3333322  


Q ss_pred             --------eeeEEEccchhhhHhhc
Q psy7108         289 --------LLDISITPQSVKEALAD  305 (703)
Q Consensus       289 --------~~~~~~spd~~~~~l~s  305 (703)
                              ...++|+.++  .+|+.
T Consensus       284 ~~p~de~~ve~L~Wns~s--diLAv  306 (1265)
T KOG1920|consen  284 PFPLDEKEVEELAWNSNS--DILAV  306 (1265)
T ss_pred             CCcccccchheeeecCCC--Cceee
Confidence                    3457888877  44443

>KOG1008|consensus

Probab=97.43  E-value=4.9e-05  Score=81.60  Aligned_cols=201  Identities=12%  Similarity=0.194  Sum_probs=126.4

Q ss_pred             CCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCcee--EEEecCCCcEEEEEEecC-CCEEEEEEC----CCeEEEE
Q psy7108          46 HEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQ--HETIQLLSDALCVAYKPD-GTEIVVATL----DGQLIMF  118 (703)
Q Consensus        46 H~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~--~~~~~~~~~V~~v~~spd-g~~las~s~----dg~I~vw  118 (703)
                      ....+.|+++.-..+...++.|..+|.|-+-.+......  ..+..+...+++++|++- .+.||.|-.    |..+.||
T Consensus        55 dtqy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iw  134 (783)
T KOG1008|consen   55 DTQYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIW  134 (783)
T ss_pred             cCCCceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccce
Confidence            356688888876323457889999999998877644322  223347778999999984 456666532    4579999


Q ss_pred             EcCCCcE--EE--EEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEec
Q psy7108         119 DVESAAQ--VG--SVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTIT  194 (703)
Q Consensus       119 d~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~  194 (703)
                      |+.++-.  ..  .+.+.                   ......++||..+.+.+++|.....++++|++........ ..
T Consensus       135 di~s~ltvPke~~~fs~~-------------------~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~s-vn  194 (783)
T KOG1008|consen  135 DINSLLTVPKESPLFSSS-------------------TLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVSS-VN  194 (783)
T ss_pred             ecccccCCCccccccccc-------------------cccCccccccccCcchhhcccccchhhhhhhhhhhhhhhh-hh
Confidence            9987621  11  11110                   1124558999999999999998889999999843211110 00


Q ss_pred             cCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCC-CCCCc-cceeecCCc----cceEEEEEcCCCC-EEE
Q psy7108         195 QNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPG-VKKGD-MAARVLKPE----VRVFCVKFSPTGQ-AWV  267 (703)
Q Consensus       195 ~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd-~~~~~-~~~~~~~h~----~~V~~l~~spdg~-~l~  267 (703)
                              ...+..+.++|-....+.+..+|      .+.+|| .++-+ +...+....    ..+..++|+|... .++
T Consensus       195 --------Tk~vqG~tVdp~~~nY~cs~~dg------~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla  260 (783)
T KOG1008|consen  195 --------TKYVQGITVDPFSPNYFCSNSDG------DIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLA  260 (783)
T ss_pred             --------hhhcccceecCCCCCceeccccC------ceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhh
Confidence                    11456678888433333334343      699999 33322 222222222    2489999999764 457


Q ss_pred             EEeCCC--EEEEEcC
Q psy7108         268 AATTEG--VHIYSLD  280 (703)
Q Consensus       268 s~s~Dg--v~iwd~~  280 (703)
                      +.+.|.  |+.+++.
T Consensus       261 ~l~RdS~tIrlydi~  275 (783)
T KOG1008|consen  261 VLSRDSITIRLYDIC  275 (783)
T ss_pred             hhccCcceEEEeccc
Confidence            777777  7888864

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.42  E-value=0.023  Score=56.00  Aligned_cols=230  Identities=14%  Similarity=0.131  Sum_probs=134.3

Q ss_pred             eeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcE-EEEEcCCCceeEEEecCCCcE--EEEEEecCCCEE
Q psy7108          30 KGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTV-KLWNAVETDTQHETIQLLSDA--LCVAYKPDGTEI  106 (703)
Q Consensus        30 ~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V-~iWd~~~~~~~~~~~~~~~~V--~~v~~spdg~~l  106 (703)
                      ..+..|+++  ..+. -...-..++|+|. ...-++.+-.-|+. .++|..+.+.+......++.-  -.-.|||||.+|
T Consensus        53 ~~~eaGk~v--~~~~-lpaR~Hgi~~~p~-~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~L  128 (366)
T COG3490          53 TLSEAGKIV--FATA-LPARGHGIAFHPA-LPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLL  128 (366)
T ss_pred             EEccCCcee--eeee-cccccCCeecCCC-CcceEEEEecCCceEEEECCCCCcCcEEEecccCceeecccccCCCCcEE
Confidence            345667776  3221 1233446788884 56667777766764 688988776555444333221  125799999998


Q ss_pred             EEEECC-----CeEEEEEcCCC-cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec------C
Q psy7108         107 VVATLD-----GQLIMFDVESA-AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ------S  174 (703)
Q Consensus       107 as~s~d-----g~I~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~------d  174 (703)
                      ...-.|     |.|-|||.+.+ +.+..+..+                    +-.-..+.|.+||+.++.+..      |
T Consensus       129 YATEndfd~~rGViGvYd~r~~fqrvgE~~t~--------------------GiGpHev~lm~DGrtlvvanGGIethpd  188 (366)
T COG3490         129 YATENDFDPNRGVIGVYDAREGFQRVGEFSTH--------------------GIGPHEVTLMADGRTLVVANGGIETHPD  188 (366)
T ss_pred             EeecCCCCCCCceEEEEecccccceecccccC--------------------CcCcceeEEecCCcEEEEeCCceecccc
Confidence            776443     67999998754 333444443                    225677899999999987643      1


Q ss_pred             ------------CcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCc
Q psy7108         175 ------------KYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGD  242 (703)
Q Consensus       175 ------------g~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~  242 (703)
                                  -++.+.|..+|..+.+...+..    -..-.+..++..+||+..+..-..|..+. .---+=-...++
T Consensus       189 fgR~~lNldsMePSlvlld~atG~liekh~Lp~~----l~~lSiRHld~g~dgtvwfgcQy~G~~~d-~ppLvg~~~~g~  263 (366)
T COG3490         189 FGRTELNLDSMEPSLVLLDAATGNLIEKHTLPAS----LRQLSIRHLDIGRDGTVWFGCQYRGPRND-LPPLVGHFRKGE  263 (366)
T ss_pred             cCccccchhhcCccEEEEeccccchhhhccCchh----hhhcceeeeeeCCCCcEEEEEEeeCCCcc-CCcceeeccCCC
Confidence                        2344555555555544433211    12236777888888886554433331111 000000112233


Q ss_pred             cceeecC-------CccceEEEEEcCCCCEEEEEeCCC--EEEEEcCCCceecce
Q psy7108         243 MAARVLK-------PEVRVFCVKFSPTGQAWVAATTEG--VHIYSLDSGYVFDPF  288 (703)
Q Consensus       243 ~~~~~~~-------h~~~V~~l~~spdg~~l~s~s~Dg--v~iwd~~~~~~~~~~  288 (703)
                      .+..+.-       ...-|-+++.+.+..+++..+-.|  ..+||..+|......
T Consensus       264 ~l~~~~~pee~~~~~anYigsiA~n~~~glV~lTSP~GN~~vi~da~tG~vv~~a  318 (366)
T COG3490         264 PLEFLDLPEEQTAAFANYIGSIAANRRDGLVALTSPRGNRAVIWDAATGAVVSEA  318 (366)
T ss_pred             cCcccCCCHHHHHHHHhhhhheeecccCCeEEEecCCCCeEEEEEcCCCcEEecc
Confidence            3332222       223477888887777877777666  789999999886544

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=97.42  E-value=0.043  Score=59.20  Aligned_cols=204  Identities=15%  Similarity=0.201  Sum_probs=135.6

Q ss_pred             EEEEEcCCCCCC-EEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEEC---CCeEEEEEcCCCcEE
Q psy7108          51 SCIEFSPVLSST-GMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATL---DGQLIMFDVESAAQV  126 (703)
Q Consensus        51 ~~l~~sp~~dg~-~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~---dg~I~vwd~~~~~~~  126 (703)
                      ..++.++  .+. ..++...++.|.+.|..+... ............++++|+++.+.++..   ++++.+.|..+++..
T Consensus        77 ~~i~v~~--~~~~vyv~~~~~~~v~vid~~~~~~-~~~~~vG~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~  153 (381)
T COG3391          77 AGVAVNP--AGNKVYVTTGDSNTVSVIDTATNTV-LGSIPVGLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVT  153 (381)
T ss_pred             cceeeCC--CCCeEEEecCCCCeEEEEcCcccce-eeEeeeccCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEE
Confidence            4667787  676 445555568999999766543 333333336788999999988877765   688999999888887


Q ss_pred             EEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe-cCCcEEEEECCCCceEEEEEeccCCcccccccc
Q psy7108         127 GSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG-QSKYICIYSSREGILLKKFTITQNKSLDGINDF  205 (703)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s-~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~  205 (703)
                      ........                    + ..++++|+|+.+.++. .++.|.+.|.......+ -....   .......
T Consensus       154 ~~~~vG~~--------------------P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~-~~~~~---~~~~~~~  208 (381)
T COG3391         154 ATIPVGNT--------------------P-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVR-GSVGS---LVGVGTG  208 (381)
T ss_pred             EEEecCCC--------------------c-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceec-ccccc---ccccCCC
Confidence            77443221                    3 7899999999777665 67889999977655443 11000   0111123


Q ss_pred             ceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCcc-ceEEEEEcCCCCEEEEEeCC-C-EEEEEcCCC
Q psy7108         206 INRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEV-RVFCVKFSPTGQAWVAATTE-G-VHIYSLDSG  282 (703)
Q Consensus       206 v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~-~V~~l~~spdg~~l~s~s~D-g-v~iwd~~~~  282 (703)
                      -..+.++|+|..+++......   +..+...|..++........-.. ....+..+|+|+.+.+.... + +.+.|..+.
T Consensus       209 P~~i~v~~~g~~~yV~~~~~~---~~~v~~id~~~~~v~~~~~~~~~~~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~  285 (381)
T COG3391         209 PAGIAVDPDGNRVYVANDGSG---SNNVLKIDTATGNVTATDLPVGSGAPRGVAVDPAGKAAYVANSQGGTVSVIDGATD  285 (381)
T ss_pred             CceEEECCCCCEEEEEeccCC---CceEEEEeCCCceEEEeccccccCCCCceeECCCCCEEEEEecCCCeEEEEeCCCC
Confidence            456899999997777665421   23677778777655443111111 45678999999998777554 3 888888776


Q ss_pred             cee
Q psy7108         283 YVF  285 (703)
Q Consensus       283 ~~~  285 (703)
                      ...
T Consensus       286 ~v~  288 (381)
T COG3391         286 RVV  288 (381)
T ss_pred             cee
Confidence            554

>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit

Probab=97.27  E-value=7.3e-05  Score=79.87  Aligned_cols=63  Identities=19%  Similarity=0.157  Sum_probs=53.1

Q ss_pred             eeeeeeecchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccccCC
Q psy7108         604 NIFQVGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLGN  669 (703)
Q Consensus       604 s~~e~~~~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~~~  669 (703)
                      ++++....|++++++++++.++..+++++|||+|+++++.+++.+|+   +++.+++++|...+..
T Consensus       113 ~~~d~~~~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~---~v~~lv~~~~p~~~~~  175 (350)
T TIGR01836       113 TLDDYINGYIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPD---KIKNLVTMVTPVDFET  175 (350)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCch---heeeEEEeccccccCC
Confidence            35555667799999999999998999999999999999998888764   6889999998776543

This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.

>KOG1645|consensus

Probab=97.26  E-value=0.002  Score=65.93  Aligned_cols=78  Identities=22%  Similarity=0.257  Sum_probs=65.6

Q ss_pred             ecCCCcEEEEEEecCCC-EEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCC
Q psy7108          88 IQLLSDALCVAYKPDGT-EIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGS  166 (703)
Q Consensus        88 ~~~~~~V~~v~~spdg~-~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~  166 (703)
                      ..+...|.+++|||... ++..++.+..|+|.|+++...+..+..+.                     .+++++|.-|..
T Consensus       190 p~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~~---------------------~~wSC~wDlde~  248 (463)
T KOG1645|consen  190 PGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAYN---------------------QIWSCCWDLDER  248 (463)
T ss_pred             cccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheeccC---------------------CceeeeeccCCc
Confidence            34666799999999887 78889999999999999999888888765                     799999998764


Q ss_pred             -EEEEEecCCcEEEEECCCCc
Q psy7108         167 -CILAAGQSKYICIYSSREGI  186 (703)
Q Consensus       167 -~l~s~s~dg~I~lwD~~~~~  186 (703)
                       +|..|-..|.|.+||++..+
T Consensus       249 h~IYaGl~nG~VlvyD~R~~~  269 (463)
T KOG1645|consen  249 HVIYAGLQNGMVLVYDMRQPE  269 (463)
T ss_pred             ceeEEeccCceEEEEEccCCC
Confidence             56667788999999998643

>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit

Probab=97.26  E-value=4.7e-05  Score=81.34  Aligned_cols=58  Identities=21%  Similarity=0.180  Sum_probs=44.2

Q ss_pred             hcccCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhhhc
Q psy7108         525 ELGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFL  585 (703)
Q Consensus       525 ~~g~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~  585 (703)
                      +....|+.++++++++..+..++.++|||+||+.++..++..|   ++++.++..+|...+
T Consensus       116 d~~~~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~---~~v~~lv~~~~p~~~  173 (350)
T TIGR01836       116 DYINGYIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYP---DKIKNLVTMVTPVDF  173 (350)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCc---hheeeEEEecccccc
Confidence            4444568889999999888889999999999998877666554   357777777765544

This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.

>KOG1275|consensus

Probab=97.24  E-value=0.0033  Score=70.63  Aligned_cols=150  Identities=10%  Similarity=0.067  Sum_probs=108.9

Q ss_pred             CeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECC---------CeEEEEE
Q psy7108          49 PVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLD---------GQLIMFD  119 (703)
Q Consensus        49 ~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~d---------g~I~vwd  119 (703)
                      .|+-++.    +++.+.+|...|+|.+-|..+.+.+..+..|.+.|.++...  |+.|++|+..         .-|+|||
T Consensus       179 ~v~imR~----Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDfDv~--GNlLitCG~S~R~~~l~~D~FvkVYD  252 (1118)
T KOG1275|consen  179 GVTIMRY----NNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDFDVQ--GNLLITCGYSMRRYNLAMDPFVKVYD  252 (1118)
T ss_pred             ceEEEEe----cCcEEEeecccceEEeecCCcCceeeeeeccccceeeeecc--CCeEEEeecccccccccccchhhhhh
Confidence            4555554    56899999999999999999998888888999999876654  8899998774         4589999


Q ss_pred             cCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC-CCEEEEEecCCcEEEEECCCC-ce-EEEEEeccC
Q psy7108         120 VESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD-GSCILAAGQSKYICIYSSREG-IL-LKKFTITQN  196 (703)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd-g~~l~s~s~dg~I~lwD~~~~-~~-~~~~~~~~~  196 (703)
                      ++..+.+.-+.-+.+                     -.-+.|.|. ...+++++..|...+-|..+- .+ ...+..+.+
T Consensus       253 LRmmral~PI~~~~~---------------------P~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~~~~~~v~p~  311 (1118)
T KOG1275|consen  253 LRMMRALSPIQFPYG---------------------PQFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNPPAGVKMVNPN  311 (1118)
T ss_pred             hhhhhccCCcccccC---------------------chhhhhcccccceEEEEecccceeeccccccCCCccceeEEccC
Confidence            998776655544432                     234667774 356778888899999984331 11 222222222


Q ss_pred             CccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCC
Q psy7108         197 KSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPG  237 (703)
Q Consensus       197 ~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd  237 (703)
                            ...+..+.+|+.|+.++++..+|      .|.+|-
T Consensus       312 ------~s~i~~fDiSsn~~alafgd~~g------~v~~wa  340 (1118)
T KOG1275|consen  312 ------GSGISAFDISSNGDALAFGDHEG------HVNLWA  340 (1118)
T ss_pred             ------CCcceeEEecCCCceEEEecccC------cEeeec
Confidence                  23588899999999999987765      788995

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=97.23  E-value=0.096  Score=57.30  Aligned_cols=200  Identities=13%  Similarity=0.125  Sum_probs=107.4

Q ss_pred             CeEEEEEcCCCCCCEEEEE-eCCC----cEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCC----------
Q psy7108          49 PVSCIEFSPVLSSTGMVSA-SWDK----TVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDG----------  113 (703)
Q Consensus        49 ~V~~l~~sp~~dg~~L~sg-s~Dg----~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg----------  113 (703)
                      .+...+++|  +|+++|.+ +..|    ++++.|+++++.+...+..... ..++|.+|++.|+....+.          
T Consensus       125 ~~~~~~~Sp--dg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~~~-~~~~W~~d~~~~~y~~~~~~~~~~~~~~~  201 (414)
T PF02897_consen  125 SLGGFSVSP--DGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENPKF-SSVSWSDDGKGFFYTRFDEDQRTSDSGYP  201 (414)
T ss_dssp             EEEEEEETT--TSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEEES-EEEEECTTSSEEEEEECSTTTSS-CCGCC
T ss_pred             EeeeeeECC--CCCEEEEEecCCCCceEEEEEEECCCCcCcCCccccccc-ceEEEeCCCCEEEEEEeCcccccccCCCC
Confidence            444678999  99988865 4444    5899999998655444332222 2399999999887765443          


Q ss_pred             -eEEEEEcCCCcE--EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec---C-CcEEEEECCCC-
Q psy7108         114 -QLIMFDVESAAQ--VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ---S-KYICIYSSREG-  185 (703)
Q Consensus       114 -~I~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~---d-g~I~lwD~~~~-  185 (703)
                       .|+.|++.+...  ...++....                  ......+..++|+++|+..+.   + ..+.+.|+..+ 
T Consensus       202 ~~v~~~~~gt~~~~d~lvfe~~~~------------------~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~  263 (414)
T PF02897_consen  202 RQVYRHKLGTPQSEDELVFEEPDE------------------PFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGG  263 (414)
T ss_dssp             EEEEEEETTS-GGG-EEEEC-TTC------------------TTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTT
T ss_pred             cEEEEEECCCChHhCeeEEeecCC------------------CcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccC
Confidence             377888876643  234444322                  112567889999999886432   2 35888898875 


Q ss_pred             ---ceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcc---ceeecCCccceEEEEE
Q psy7108         186 ---ILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDM---AARVLKPEVRVFCVKF  259 (703)
Q Consensus       186 ---~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~---~~~~~~h~~~V~~l~~  259 (703)
                         ...+.+.....        .+....-+..+.+++.+. .+...  ..|...++.....   ...+..+...+.-..+
T Consensus       264 ~~~~~~~~l~~~~~--------~~~~~v~~~~~~~yi~Tn-~~a~~--~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~  332 (414)
T PF02897_consen  264 SPDAKPKLLSPRED--------GVEYYVDHHGDRLYILTN-DDAPN--GRLVAVDLADPSPAEWWTVLIPEDEDVSLEDV  332 (414)
T ss_dssp             TSS-SEEEEEESSS--------S-EEEEEEETTEEEEEE--TT-TT---EEEEEETTSTSGGGEEEEEE--SSSEEEEEE
T ss_pred             CCcCCcEEEeCCCC--------ceEEEEEccCCEEEEeeC-CCCCC--cEEEEecccccccccceeEEcCCCCceeEEEE
Confidence               22333322221        121212222333444433 32122  2444445554432   2244455543333333


Q ss_pred             cCCCCEE-EEEeCCC---EEEEEcC
Q psy7108         260 SPTGQAW-VAATTEG---VHIYSLD  280 (703)
Q Consensus       260 spdg~~l-~s~s~Dg---v~iwd~~  280 (703)
                      ...+++| +....++   |+++++.
T Consensus       333 ~~~~~~Lvl~~~~~~~~~l~v~~~~  357 (414)
T PF02897_consen  333 SLFKDYLVLSYRENGSSRLRVYDLD  357 (414)
T ss_dssp             EEETTEEEEEEEETTEEEEEEEETT
T ss_pred             EEECCEEEEEEEECCccEEEEEECC
Confidence            4455565 4455555   7899998

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=97.18  E-value=0.015  Score=63.39  Aligned_cols=144  Identities=15%  Similarity=0.179  Sum_probs=82.4

Q ss_pred             cCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEE
Q psy7108          89 QLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCI  168 (703)
Q Consensus        89 ~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l  168 (703)
                      ...-....+.++|+|+.++++ .||.-.++.....+....  +                       .-...+|.+.++ +
T Consensus        30 ~~~~~p~~ls~npngr~v~V~-g~geY~iyt~~~~r~k~~--G-----------------------~g~~~vw~~~n~-y   82 (443)
T PF04053_consen   30 SCEIYPQSLSHNPNGRFVLVC-GDGEYEIYTALAWRNKAF--G-----------------------SGLSFVWSSRNR-Y   82 (443)
T ss_dssp             E-SS--SEEEE-TTSSEEEEE-ETTEEEEEETTTTEEEEE--E-----------------------E-SEEEE-TSSE-E
T ss_pred             CCCcCCeeEEECCCCCEEEEE-cCCEEEEEEccCCccccc--C-----------------------ceeEEEEecCcc-E
Confidence            344557889999999999885 578888887544443222  2                       235688998555 6


Q ss_pred             EEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeec
Q psy7108         169 LAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL  248 (703)
Q Consensus       169 ~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~  248 (703)
                      ++-..+++|.++.--+....+.+..+.         .+..+-.   |..+.+.+.+       .|.+||..+++.+.++.
T Consensus        83 Av~~~~~~I~I~kn~~~~~~k~i~~~~---------~~~~If~---G~LL~~~~~~-------~i~~yDw~~~~~i~~i~  143 (443)
T PF04053_consen   83 AVLESSSTIKIYKNFKNEVVKSIKLPF---------SVEKIFG---GNLLGVKSSD-------FICFYDWETGKLIRRID  143 (443)
T ss_dssp             EEE-TTS-EEEEETTEE-TT-----SS----------EEEEE----SSSEEEEETT-------EEEEE-TTT--EEEEES
T ss_pred             EEEECCCeEEEEEcCccccceEEcCCc---------ccceEEc---CcEEEEECCC-------CEEEEEhhHcceeeEEe
Confidence            666667889996322222222332211         1222222   8877776653       69999999999888877


Q ss_pred             CCccceEEEEEcCCCCEEEEEeCCCEEEEEcC
Q psy7108         249 KPEVRVFCVKFSPTGQAWVAATTEGVHIYSLD  280 (703)
Q Consensus       249 ~h~~~V~~l~~spdg~~l~s~s~Dgv~iwd~~  280 (703)
                      -.  .|..+.|+++|++++..+.+.+.|++.+
T Consensus       144 v~--~vk~V~Ws~~g~~val~t~~~i~il~~~  173 (443)
T PF04053_consen  144 VS--AVKYVIWSDDGELVALVTKDSIYILKYN  173 (443)
T ss_dssp             S---E-EEEEE-TTSSEEEEE-S-SEEEEEE-
T ss_pred             cC--CCcEEEEECCCCEEEEEeCCeEEEEEec
Confidence            54  3899999999999999999987666543

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>smart00320 WD40 WD40 repeats

Probab=97.12  E-value=0.00072  Score=44.88  Aligned_cols=35  Identities=49%  Similarity=0.868  Sum_probs=32.3

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEE
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWN   77 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd   77 (703)
                      ..+..|...|.+++|++  ++..+++++.|+.+++|+
T Consensus         6 ~~~~~~~~~i~~~~~~~--~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        6 KTLKGHTGPVTSVAFSP--DGKYLASASDDGTIKLWD   40 (40)
T ss_pred             EEEEecCCceeEEEECC--CCCEEEEecCCCeEEEcC
Confidence            67778999999999999  889999999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=97.10  E-value=0.008  Score=64.23  Aligned_cols=219  Identities=16%  Similarity=0.212  Sum_probs=112.6

Q ss_pred             cCCCCCCEEEEEe---------CCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEE
Q psy7108          56 SPVLSSTGMVSAS---------WDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQV  126 (703)
Q Consensus        56 sp~~dg~~L~sgs---------~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~  126 (703)
                      ||  |+++++...         ..+...++|++++. ...+......+....|||+|+.+|... ++.|.+++..+++..
T Consensus         1 S~--d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~-~~~l~~~~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~   76 (353)
T PF00930_consen    1 SP--DGKFVLFATNYTKQWRHSFKGDYYIYDIETGE-ITPLTPPPPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQET   76 (353)
T ss_dssp             -T--TSSEEEEEEEEEEESSSEEEEEEEEEETTTTE-EEESS-EETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEE
T ss_pred             CC--CCCeEEEEECcEEeeeeccceeEEEEecCCCc-eEECcCCccccccceeecCCCeeEEEe-cCceEEEECCCCCeE
Confidence            56  777777632         23567899998863 333333467788999999999999885 689999999887544


Q ss_pred             EEEe-ccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC-CcEEEEEC---CCCc----eEEEEEe----
Q psy7108         127 GSVE-ARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS-KYICIYSS---REGI----LLKKFTI----  193 (703)
Q Consensus       127 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d-g~I~lwD~---~~~~----~~~~~~~----  193 (703)
                      +... +...+..+.  .+..-.+...  +.-..+-|||||++|+...-| ..|..+.+   ....    ....+.-    
T Consensus        77 ~lT~dg~~~i~nG~--~dwvyeEEv~--~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G  152 (353)
T PF00930_consen   77 QLTTDGEPGIYNGV--PDWVYEEEVF--DRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAG  152 (353)
T ss_dssp             ESES--TTTEEESB----HHHHHHTS--SSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--BTT
T ss_pred             EeccccceeEEcCc--cceecccccc--ccccceEECCCCCEEEEEEECCcCCceEEeeccCCccccCCcccccccCCCC
Confidence            3222 211100000  1100001000  112468899999999875433 22332222   1110    1111110    


Q ss_pred             -------------ccCCc--------cccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC-Cc
Q psy7108         194 -------------TQNKS--------LDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK-PE  251 (703)
Q Consensus       194 -------------~~~~~--------~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~-h~  251 (703)
                                   ..+..        .......+..+.|+++++.+++...+- ......+.+.|..++........ ..
T Consensus       153 ~~np~v~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR-~q~~~~l~~~d~~tg~~~~~~~e~~~  231 (353)
T PF00930_consen  153 DPNPRVSLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNR-DQNRLDLVLCDASTGETRVVLEETSD  231 (353)
T ss_dssp             S---EEEEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETTEEEEEEEEET-TSTEEEEEEEEECTTTCEEEEEEESS
T ss_pred             CcCCceEEEEEECCCCcEEEeeeccccCCCccCcccceecCCCcEEEEEEccc-CCCEEEEEEEECCCCceeEEEEecCC
Confidence                         00000        012235678899999999444433221 33345677778877654322221 11


Q ss_pred             cc---eEEEEEc-CCCCEE-EEEeCCC---EEEEEcCCCc
Q psy7108         252 VR---VFCVKFS-PTGQAW-VAATTEG---VHIYSLDSGY  283 (703)
Q Consensus       252 ~~---V~~l~~s-pdg~~l-~s~s~Dg---v~iwd~~~~~  283 (703)
                      ..   -....|. +++..+ .....+|   |.+++..++.
T Consensus       232 ~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~~  271 (353)
T PF00930_consen  232 GWVDVYDPPHFLGPDGNEFLWISERDGYRHLYLYDLDGGK  271 (353)
T ss_dssp             SSSSSSSEEEE-TTTSSEEEEEEETTSSEEEEEEETTSSE
T ss_pred             cceeeecccccccCCCCEEEEEEEcCCCcEEEEEcccccc
Confidence            22   2345554 666554 4455777   6666776665

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>KOG4640|consensus

Probab=97.09  E-value=0.0023  Score=69.20  Aligned_cols=80  Identities=16%  Similarity=0.207  Sum_probs=67.3

Q ss_pred             CcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEE-EEEEecCCCEEEEEECCCeEEEEEcCCCcE
Q psy7108          47 EGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDAL-CVAYKPDGTEIVVATLDGQLIMFDVESAAQ  125 (703)
Q Consensus        47 ~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~-~v~~spdg~~las~s~dg~I~vwd~~~~~~  125 (703)
                      ...|.-+.|+|  .-+++|++..+|.|.+..+. .+.+..+..+...++ +++|.|||+.||+|-.||+|++-|++++..
T Consensus        20 ~~~i~~~ewnP--~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~   96 (665)
T KOG4640|consen   20 PINIKRIEWNP--KMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGR   96 (665)
T ss_pred             ccceEEEEEcC--ccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCc
Confidence            45688899999  89999999999999888775 445555554666777 999999999999999999999999999987


Q ss_pred             EEEE
Q psy7108         126 VGSV  129 (703)
Q Consensus       126 ~~~~  129 (703)
                      +...
T Consensus        97 l~~~  100 (665)
T KOG4640|consen   97 LVSF  100 (665)
T ss_pred             eecc
Confidence            7663

>PRK02888 nitrous-oxide reductase; Validated

Probab=97.01  E-value=0.013  Score=65.00  Aligned_cols=142  Identities=12%  Similarity=0.149  Sum_probs=85.7

Q ss_pred             CCcEEEEEcCC----CceeEEEecCCCcEEEEEEecCCCEEEEEEC-CCeEEEEEcCCCcEEEEEeccccCCCCCCCCcc
Q psy7108          70 DKTVKLWNAVE----TDTQHETIQLLSDALCVAYKPDGTEIVVATL-DGQLIMFDVESAAQVGSVEARRDLDSGRLDTDL  144 (703)
Q Consensus        70 Dg~V~iWd~~~----~~~~~~~~~~~~~V~~v~~spdg~~las~s~-dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~  144 (703)
                      ++.|.+.|..+    +...............++++|||+++++++. +.+|.|.|+.+.+..  +...-+      ..+.
T Consensus       295 gn~V~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~--~~~~~~------~~~~  366 (635)
T PRK02888        295 GSKVPVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDL--FDGKIK------PRDA  366 (635)
T ss_pred             CCEEEEEECCccccCCcceEEEEECCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhh--hhccCC------ccce
Confidence            35677888776    3345566667777889999999998876654 889999999875531  000000      0000


Q ss_pred             chhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCC----------CceEEEEEeccCCccccccccceeeeeccC
Q psy7108         145 VTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSRE----------GILLKKFTITQNKSLDGINDFINRRKMTEF  214 (703)
Q Consensus       145 ~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~----------~~~~~~~~~~~~~~~~~~~~~v~~~~~spd  214 (703)
                      ....... +..-...+|+++|+...+-.-|..|..||+.+          ...+.++..+-+   .+|......-.-.||
T Consensus       367 vvaevev-GlGPLHTaFDg~G~aytslf~dsqv~kwn~~~a~~~~~g~~~~~v~~k~dV~y~---pgh~~~~~g~t~~~d  442 (635)
T PRK02888        367 VVAEPEL-GLGPLHTAFDGRGNAYTTLFLDSQIVKWNIEAAIRAYKGEKVDPIVQKLDVHYQ---PGHNHASMGETKEAD  442 (635)
T ss_pred             EEEeecc-CCCcceEEECCCCCEEEeEeecceeEEEehHHHHHHhccccCCcceecccCCCc---cceeeecCCCcCCCC
Confidence            0000000 11334678999998888888899999999876          233333333322   233223333345788


Q ss_pred             CCEEEEEcc
Q psy7108         215 GNVSLIETR  223 (703)
Q Consensus       215 g~~l~~~~~  223 (703)
                      |+++++...
T Consensus       443 gk~l~~~nk  451 (635)
T PRK02888        443 GKWLVSLNK  451 (635)
T ss_pred             CCEEEEccc
Confidence            888877553

>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification

Probab=97.00  E-value=4.1e-05  Score=75.53  Aligned_cols=62  Identities=23%  Similarity=0.291  Sum_probs=44.8

Q ss_pred             hcccCCchhhHHHhHccC--CCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhhhccccc
Q psy7108         525 ELGLYDTTATIDYILNQT--GHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLGNLV  589 (703)
Q Consensus       525 ~~g~~d~~~~~~~i~~~~--~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  589 (703)
                      +-.+.|+-++++|+.+..  ..++++++|||+||++++++....   .+.++..++.+|+..+....
T Consensus        42 ~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~~---~~~f~a~v~~~g~~d~~~~~  105 (213)
T PF00326_consen   42 QADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQH---PDRFKAAVAGAGVSDLFSYY  105 (213)
T ss_dssp             HHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHHT---CCGSSEEEEESE-SSTTCSB
T ss_pred             ccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhccc---ceeeeeeeccceecchhccc
Confidence            456778899999998775  358999999999999887766533   33456667777765544443

; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=96.99  E-value=0.24  Score=53.28  Aligned_cols=224  Identities=15%  Similarity=0.154  Sum_probs=119.2

Q ss_pred             CeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCcee------------------------------------------EE
Q psy7108          49 PVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQ------------------------------------------HE   86 (703)
Q Consensus        49 ~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~------------------------------------------~~   86 (703)
                      .|+.+.|++  +...|+.|...|.|.||.....+.-                                          ..
T Consensus         3 ~v~~vs~a~--~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~   80 (395)
T PF08596_consen    3 SVTHVSFAP--ETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLT   80 (395)
T ss_dssp             -EEEEEEET--TTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEE
T ss_pred             eEEEEEecC--CCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchh
Confidence            578899999  8888888988899988755321100                                          00


Q ss_pred             -EecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC--
Q psy7108          87 -TIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA--  163 (703)
Q Consensus        87 -~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp--  163 (703)
                       +....++|++++.| |=-++|.|..+|.+.|.|++....+..-.-...            .........++++.|+.  
T Consensus        81 l~~~~~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~------------~~~~~~~~~vt~ieF~vm~  147 (395)
T PF08596_consen   81 LLDAKQGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYNENIRES------------FLSKSSSSYVTSIEFSVMT  147 (395)
T ss_dssp             EE---S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--------------T-SS----EEEEEEEEEE
T ss_pred             heeccCCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEeecccccc------------ccccccccCeeEEEEEEEe
Confidence             01124678999987 455899999999999999988877665322210            00111234678888862  


Q ss_pred             ---CC---CEEEEEecCCcEEEEECC--C-CceEEEEEeccCCccccccccceeee-eccC-------------------
Q psy7108         164 ---DG---SCILAAGQSKYICIYSSR--E-GILLKKFTITQNKSLDGINDFINRRK-MTEF-------------------  214 (703)
Q Consensus       164 ---dg---~~l~s~s~dg~I~lwD~~--~-~~~~~~~~~~~~~~~~~~~~~v~~~~-~spd-------------------  214 (703)
                         |+   -.+++|+..|.+.+|.+-  . +.-...+....    ..+.+.+..+. ++.+                   
T Consensus       148 ~~~D~ySSi~L~vGTn~G~v~~fkIlp~~~g~f~v~~~~~~----~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~  223 (395)
T PF08596_consen  148 LGGDGYSSICLLVGTNSGNVLTFKILPSSNGRFSVQFAGAT----TNHDSPILSIIPINADTGESALATISAMQGLSKGI  223 (395)
T ss_dssp             -TTSSSEEEEEEEEETTSEEEEEEEEE-GGG-EEEEEEEEE------SS----EEEEEETTT--B-B-BHHHHHGGGGT-
T ss_pred             cCCCcccceEEEEEeCCCCEEEEEEecCCCCceEEEEeecc----ccCCCceEEEEEEECCCCCcccCchhHhhccccCC
Confidence               33   457788889999999764  1 22222222111    01111222222 2111                   


Q ss_pred             --CCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEE-----cCCCCEEEEEeCCC-EEEEEcCCCceec
Q psy7108         215 --GNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKF-----SPTGQAWVAATTEG-VHIYSLDSGYVFD  286 (703)
Q Consensus       215 --g~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~-----spdg~~l~s~s~Dg-v~iwd~~~~~~~~  286 (703)
                        ..++++.+.       ..++++...+.+...+..........+.+     ...+..|++-..+| +++|.+..-+.+.
T Consensus       224 ~i~g~vVvvSe-------~~irv~~~~~~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~  296 (395)
T PF08596_consen  224 SIPGYVVVVSE-------SDIRVFKPPKSKGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIK  296 (395)
T ss_dssp             ---EEEEEE-S-------SEEEEE-TT---EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEE
T ss_pred             CcCcEEEEEcc-------cceEEEeCCCCcccceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhh
Confidence              113333333       25888877776665555533333444455     23566788889999 9999999877654


Q ss_pred             cee----------eeEEEccch
Q psy7108         287 PFL----------LDISITPQS  298 (703)
Q Consensus       287 ~~~----------~~~~~spd~  298 (703)
                      ...          ...+++++|
T Consensus       297 ~~~l~~~~d~~~~~~ssis~~G  318 (395)
T PF08596_consen  297 SVSLPPPLDSRRLSSSSISRNG  318 (395)
T ss_dssp             EEE-SS---HHHHTT-EE-TTS
T ss_pred             cccCCCccccccccccEECCCC
Confidence            443          235666766

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=96.97  E-value=0.064  Score=45.80  Aligned_cols=66  Identities=11%  Similarity=0.121  Sum_probs=49.8

Q ss_pred             eEEEEEcCCCCC---CEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEc
Q psy7108          50 VSCIEFSPVLSS---TGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDV  120 (703)
Q Consensus        50 V~~l~~sp~~dg---~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~  120 (703)
                      |+++++... ++   +.|+.||.|..||+|+-+   .+.......+.|.+++-... ..++.+..+|+|-+|+-
T Consensus         2 V~al~~~d~-d~dg~~eLlvGs~D~~IRvf~~~---e~~~Ei~e~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~   70 (111)
T PF14783_consen    2 VTALCLFDF-DGDGENELLVGSDDFEIRVFKGD---EIVAEITETDKVTSLCSLGG-GRFAYALANGTVGVYDR   70 (111)
T ss_pred             eeEEEEEec-CCCCcceEEEecCCcEEEEEeCC---cEEEEEecccceEEEEEcCC-CEEEEEecCCEEEEEeC
Confidence            667777653 33   689999999999999832   34444556677888777655 67999999999999975

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=96.96  E-value=0.026  Score=61.52  Aligned_cols=182  Identities=11%  Similarity=0.186  Sum_probs=93.4

Q ss_pred             cccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcC
Q psy7108          42 VLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVE  121 (703)
Q Consensus        42 ~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~  121 (703)
                      .+....-....++++|  +|+.++.++ ||.-.|+....... .    ..+.....+|.+++ .+|+-..+++|.++.--
T Consensus        27 ~lg~~~~~p~~ls~np--ngr~v~V~g-~geY~iyt~~~~r~-k----~~G~g~~~vw~~~n-~yAv~~~~~~I~I~kn~   97 (443)
T PF04053_consen   27 ELGSCEIYPQSLSHNP--NGRFVLVCG-DGEYEIYTALAWRN-K----AFGSGLSFVWSSRN-RYAVLESSSTIKIYKNF   97 (443)
T ss_dssp             EEEE-SS--SEEEE-T--TSSEEEEEE-TTEEEEEETTTTEE-E----EEEE-SEEEE-TSS-EEEEE-TTS-EEEEETT
T ss_pred             cCCCCCcCCeeEEECC--CCCEEEEEc-CCEEEEEEccCCcc-c----ccCceeEEEEecCc-cEEEEECCCeEEEEEcC
Confidence            3344455678999999  999988854 57777777332211 1    12345668899854 56777668889996321


Q ss_pred             CCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCcccc
Q psy7108         122 SAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDG  201 (703)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~  201 (703)
                      +.+....+....                     .+..+-.   |..|...+. +.|.+||..+++.++++...       
T Consensus        98 ~~~~~k~i~~~~---------------------~~~~If~---G~LL~~~~~-~~i~~yDw~~~~~i~~i~v~-------  145 (443)
T PF04053_consen   98 KNEVVKSIKLPF---------------------SVEKIFG---GNLLGVKSS-DFICFYDWETGKLIRRIDVS-------  145 (443)
T ss_dssp             EE-TT-----SS----------------------EEEEE----SSSEEEEET-TEEEEE-TTT--EEEEESS--------
T ss_pred             ccccceEEcCCc---------------------ccceEEc---CcEEEEECC-CCEEEEEhhHcceeeEEecC-------
Confidence            111111222211                     2333332   777776655 48999999999999887521       


Q ss_pred             ccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC---------c--cceeecCCccceEEEEEcCCCCEEEEEe
Q psy7108         202 INDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG---------D--MAARVLKPEVRVFCVKFSPTGQAWVAAT  270 (703)
Q Consensus       202 ~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~---------~--~~~~~~~h~~~V~~l~~spdg~~l~s~s  270 (703)
                         .|..+.|+++|..++..+.+       .+.+.+....         -  .......-...|.+.+|..|  .++-.+
T Consensus       146 ---~vk~V~Ws~~g~~val~t~~-------~i~il~~~~~~~~~~~~~g~e~~f~~~~E~~~~IkSg~W~~d--~fiYtT  213 (443)
T PF04053_consen  146 ---AVKYVIWSDDGELVALVTKD-------SIYILKYNLEAVAAIPEEGVEDAFELIHEISERIKSGCWVED--CFIYTT  213 (443)
T ss_dssp             ---E-EEEEE-TTSSEEEEE-S--------SEEEEEE-HHHHHHBTTTB-GGGEEEEEEE-S--SEEEEETT--EEEEE-
T ss_pred             ---CCcEEEEECCCCEEEEEeCC-------eEEEEEecchhcccccccCchhceEEEEEecceeEEEEEEcC--EEEEEc
Confidence               46789999999999998765       3555543221         0  11122122456888888766  444444


Q ss_pred             CCCEEE
Q psy7108         271 TEGVHI  276 (703)
Q Consensus       271 ~Dgv~i  276 (703)
                      ...++-
T Consensus       214 ~~~lkY  219 (443)
T PF04053_consen  214 SNHLKY  219 (443)
T ss_dssp             TTEEEE
T ss_pred             CCeEEE
Confidence            334443

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>PRK02888 nitrous-oxide reductase; Validated

Probab=96.95  E-value=0.031  Score=62.07  Aligned_cols=183  Identities=10%  Similarity=0.082  Sum_probs=110.1

Q ss_pred             EcCCCCCCEEEEE-eCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCC----eEEEEEcCCCcEEEEE
Q psy7108          55 FSPVLSSTGMVSA-SWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDG----QLIMFDVESAAQVGSV  129 (703)
Q Consensus        55 ~sp~~dg~~L~sg-s~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg----~I~vwd~~~~~~~~~~  129 (703)
                      ++|  ||..+... -..+.+.+.|.++.+...++ ...+....++++|||+++++.+.+.    ++...+..+......+
T Consensus       200 lpn--DGk~l~~~~ey~~~vSvID~etmeV~~qV-~Vdgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvf  276 (635)
T PRK02888        200 LPN--DGKDLDDPKKYRSLFTAVDAETMEVAWQV-MVDGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVF  276 (635)
T ss_pred             cCC--CCCEeecccceeEEEEEEECccceEEEEE-EeCCCcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEE
Confidence            445  66655333 23456677787766433333 3344557789999999998876432    2323222222111111


Q ss_pred             eccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCC-----CceEEEEEeccCCccccccc
Q psy7108         130 EARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSRE-----GILLKKFTITQNKSLDGIND  204 (703)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~-----~~~~~~~~~~~~~~~~~~~~  204 (703)
                      .-..                      +  -++.++|++...  .++.|.+.|.++     ...+..+....         
T Consensus       277 ni~~----------------------i--ea~vkdGK~~~V--~gn~V~VID~~t~~~~~~~v~~yIPVGK---------  321 (635)
T PRK02888        277 NIAR----------------------I--EEAVKAGKFKTI--GGSKVPVVDGRKAANAGSALTRYVPVPK---------  321 (635)
T ss_pred             chHH----------------------H--HHhhhCCCEEEE--CCCEEEEEECCccccCCcceEEEEECCC---------
Confidence            1100                      0  133457877666  357899999998     34444443222         


Q ss_pred             cceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcc------------ceeecCCccceEEEEEcCCCCEEEEEeCC
Q psy7108         205 FINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDM------------AARVLKPEVRVFCVKFSPTGQAWVAATTE  272 (703)
Q Consensus       205 ~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~------------~~~~~~h~~~V~~l~~spdg~~l~s~s~D  272 (703)
                      ....+.++|||+++++++..+     .++.+.|+.+.+.            ..... -.......+|.++|+...|---|
T Consensus       322 sPHGV~vSPDGkylyVanklS-----~tVSVIDv~k~k~~~~~~~~~~~~vvaeve-vGlGPLHTaFDg~G~aytslf~d  395 (635)
T PRK02888        322 NPHGVNTSPDGKYFIANGKLS-----PTVTVIDVRKLDDLFDGKIKPRDAVVAEPE-LGLGPLHTAFDGRGNAYTTLFLD  395 (635)
T ss_pred             CccceEECCCCCEEEEeCCCC-----CcEEEEEChhhhhhhhccCCccceEEEeec-cCCCcceEEECCCCCEEEeEeec
Confidence            345689999999999887643     4788888877542            11111 12234567899999888888888


Q ss_pred             C-EEEEEcCC
Q psy7108         273 G-VHIYSLDS  281 (703)
Q Consensus       273 g-v~iwd~~~  281 (703)
                      . |..|+++.
T Consensus       396 sqv~kwn~~~  405 (635)
T PRK02888        396 SQIVKWNIEA  405 (635)
T ss_pred             ceeEEEehHH
Confidence            8 99999876

>KOG4640|consensus

Probab=96.88  E-value=0.0045  Score=67.07  Aligned_cols=81  Identities=17%  Similarity=0.299  Sum_probs=68.0

Q ss_pred             CCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEE-EEEEcCCCCEE
Q psy7108          90 LLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVS-TVCYSADGSCI  168 (703)
Q Consensus        90 ~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~-~i~~spdg~~l  168 (703)
                      ....+.-+.|+|.-..+|++..+|.|.+..+. .+.+.+++.+..                    .++ +++|.|||+.|
T Consensus        19 l~~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~--------------------~v~~sL~W~~DGkll   77 (665)
T KOG4640|consen   19 LPINIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGE--------------------NVTASLCWRPDGKLL   77 (665)
T ss_pred             cccceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCC--------------------ccceeeeecCCCCEE
Confidence            44567889999999999999999999998887 666666664432                    455 99999999999


Q ss_pred             EEEecCCcEEEEECCCCceEEEE
Q psy7108         169 LAAGQSKYICIYSSREGILLKKF  191 (703)
Q Consensus       169 ~s~s~dg~I~lwD~~~~~~~~~~  191 (703)
                      ++|-.||+|++.|+.++..+..+
T Consensus        78 aVg~kdG~I~L~Dve~~~~l~~~  100 (665)
T KOG4640|consen   78 AVGFKDGTIRLHDVEKGGRLVSF  100 (665)
T ss_pred             EEEecCCeEEEEEccCCCceecc
Confidence            99999999999999998877663

>PRK13616 lipoprotein LpqB; Provisional

Probab=96.87  E-value=0.058  Score=61.15  Aligned_cols=200  Identities=11%  Similarity=0.088  Sum_probs=105.4

Q ss_pred             CcCeEEEEEcCCCCCCEEEEEe------CCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECC-CeEEEEE
Q psy7108          47 EGPVSCIEFSPVLSSTGMVSAS------WDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLD-GQLIMFD  119 (703)
Q Consensus        47 ~~~V~~l~~sp~~dg~~L~sgs------~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~d-g~I~vwd  119 (703)
                      ...+.+.+++|  +|+.++..-      .|+.-.||-...+.....+.. ......-.|+|||+.+++.... ..+++.+
T Consensus       349 ~~~vsspaiSp--dG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~~~~lt~-g~~~t~PsWspDG~~lw~v~dg~~~~~v~~  425 (591)
T PRK13616        349 MGNITSAALSR--SGRQVAAVVTLGRGAPDPASSLWVGPLGGVAVQVLE-GHSLTRPSWSLDADAVWVVVDGNTVVRVIR  425 (591)
T ss_pred             ccCcccceECC--CCCEEEEEEeecCCCCCcceEEEEEeCCCcceeeec-CCCCCCceECCCCCceEEEecCcceEEEec
Confidence            34678999999  999887665      355556665443333333333 2347889999999988887543 2233333


Q ss_pred             cCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEE---EECCCCceEEEEEeccC
Q psy7108         120 VESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICI---YSSREGILLKKFTITQN  196 (703)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~l---wD~~~~~~~~~~~~~~~  196 (703)
                      -.....+..+.-...         .  ... ...+.|..+.|||||+.++... ++.|.+   -....|.  ..+.....
T Consensus       426 ~~~~gql~~~~vd~g---------e--~~~-~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~--~~l~~~~~  490 (591)
T PRK13616        426 DPATGQLARTPVDAS---------A--VAS-RVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQ--YALTNPRE  490 (591)
T ss_pred             cCCCceEEEEeccCc---------h--hhh-ccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCc--eeecccEE
Confidence            222222221111100         0  000 1134699999999999988765 467766   4434453  22211000


Q ss_pred             CccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC--CccceEEEEEcCCCCEEEEEeCCC
Q psy7108         197 KSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK--PEVRVFCVKFSPTGQAWVAATTEG  273 (703)
Q Consensus       197 ~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~--h~~~V~~l~~spdg~~l~s~s~Dg  273 (703)
                       ...+....+.++.|..++..+ +...++ +   ..+...++.... ......  ....+.+++-+++  .++....++
T Consensus       491 -l~~~l~~~~~~l~W~~~~~L~-V~~~~~-~---~~v~~v~vDG~~-~~~~~~~n~~~~v~~vaa~~~--~iyv~~~~g  560 (591)
T PRK13616        491 -VGPGLGDTAVSLDWRTGDSLV-VGRSDP-E---HPVWYVNLDGSN-SDALPSRNLSAPVVAVAASPS--TVYVTDARA  560 (591)
T ss_pred             -eecccCCccccceEecCCEEE-EEecCC-C---CceEEEecCCcc-ccccCCCCccCceEEEecCCc--eEEEEcCCc
Confidence             001122345778999999965 433321 1   234333443222 111122  2455777776653  455566666

>KOG4649|consensus

Probab=96.82  E-value=0.57  Score=45.90  Aligned_cols=71  Identities=13%  Similarity=0.082  Sum_probs=55.4

Q ss_pred             CCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEec
Q psy7108          61 STGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEA  131 (703)
Q Consensus        61 g~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~  131 (703)
                      |++++.|+..|.+.+-+..++.+...+.....--......+++..+.+++.|++.+..|.++...+-..+.
T Consensus        63 gdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~a~~d~~~glIycgshd~~~yalD~~~~~cVykskc  133 (354)
T KOG4649|consen   63 GDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKC  133 (354)
T ss_pred             CCEEEEEEccCcEEEEEecchhheeeeeehhhhccceEEcCCCceEEEecCCCcEEEecccccceEEeccc
Confidence            67899999999999999999876655544332222345678899999999999999999998887766554

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=96.78  E-value=0.21  Score=54.37  Aligned_cols=48  Identities=15%  Similarity=0.268  Sum_probs=35.1

Q ss_pred             cEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcC
Q psy7108          72 TVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVE  121 (703)
Q Consensus        72 ~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~  121 (703)
                      .|+||+.. |+.+..+.-..+.+.++.|+.+. .|++...||.++++|+.
T Consensus        62 ~I~iys~s-G~ll~~i~w~~~~iv~~~wt~~e-~LvvV~~dG~v~vy~~~  109 (410)
T PF04841_consen   62 SIQIYSSS-GKLLSSIPWDSGRIVGMGWTDDE-ELVVVQSDGTVRVYDLF  109 (410)
T ss_pred             EEEEECCC-CCEeEEEEECCCCEEEEEECCCC-eEEEEEcCCEEEEEeCC
Confidence            48899864 44444443333899999999865 55566789999999986

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=96.73  E-value=0.062  Score=58.37  Aligned_cols=190  Identities=15%  Similarity=0.160  Sum_probs=104.1

Q ss_pred             CCCEEEEEeCCCcEEEEEcCCCceeEEEecCC-C---------cEE-EEEEecCCCEEEEEECCCeEEEEEcCCCcEEEE
Q psy7108          60 SSTGMVSASWDKTVKLWNAVETDTQHETIQLL-S---------DAL-CVAYKPDGTEIVVATLDGQLIMFDVESAAQVGS  128 (703)
Q Consensus        60 dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~-~---------~V~-~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~  128 (703)
                      .+..++.++.+|.+.-+|..+++...+..-.. .         .+. .+..  ++..++.++.++.+..+|.++|+.+-.
T Consensus        68 ~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~v~v~~~~g~l~ald~~tG~~~W~  145 (394)
T PRK11138         68 AYNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTV--AGGKVYIGSEKGQVYALNAEDGEVAWQ  145 (394)
T ss_pred             ECCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEE--ECCEEEEEcCCCEEEEEECCCCCCccc
Confidence            35677778888999999998887655432211 0         010 1111  355677888899999999999988765


Q ss_pred             EeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCC-ccccccccce
Q psy7108         129 VEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNK-SLDGINDFIN  207 (703)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~-~~~~~~~~v~  207 (703)
                      .+....                    ...+...  .+..+++++.++.+..+|.++|+.+-.+...... ...+.    .
T Consensus       146 ~~~~~~--------------------~~ssP~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~----~  199 (394)
T PRK11138        146 TKVAGE--------------------ALSRPVV--SDGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLRGE----S  199 (394)
T ss_pred             ccCCCc--------------------eecCCEE--ECCEEEEECCCCEEEEEEccCCCEeeeecCCCCcccccCC----C
Confidence            543221                    0111111  1346777788899999999999988776532110 00010    1


Q ss_pred             eeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC--Cc-----cceEEEEEcC--CCCEEEEEeCCC-EEEE
Q psy7108         208 RRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK--PE-----VRVFCVKFSP--TGQAWVAATTEG-VHIY  277 (703)
Q Consensus       208 ~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~--h~-----~~V~~l~~sp--dg~~l~s~s~Dg-v~iw  277 (703)
                      +.... ++ .++++..++      .+...|..+|+..-....  ..     .....+.-+|  .+..++.++.+| +..+
T Consensus       200 sP~v~-~~-~v~~~~~~g------~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~al  271 (394)
T PRK11138        200 APATA-FG-GAIVGGDNG------RVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVAL  271 (394)
T ss_pred             CCEEE-CC-EEEEEcCCC------EEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEE
Confidence            11111 12 334433332      455556666654332211  00     0011111122  245666677777 8888


Q ss_pred             EcCCCcee
Q psy7108         278 SLDSGYVF  285 (703)
Q Consensus       278 d~~~~~~~  285 (703)
                      |..+|+..
T Consensus       272 d~~tG~~~  279 (394)
T PRK11138        272 DLRSGQIV  279 (394)
T ss_pred             ECCCCCEE
Confidence            98888653

>PF04192 Utp21: Utp21 specific WD40 associated putative domain ; InterPro: IPR007319 A large ribonuclear protein complex is required for the processing of the small-ribosomal-subunit rRNA - the small-subunit (SSU) processome [, ]

Probab=96.72  E-value=0.0084  Score=59.38  Aligned_cols=90  Identities=20%  Similarity=0.354  Sum_probs=77.3

Q ss_pred             CchhHHHHHhhccCcchHHHHHhhcc------HHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHH----cCCCch---h
Q psy7108         319 NEQGLIIHVLENIRTRDIALTVRSLA------EIYLEKLLKFIAAMLEVSKHIEFYVSWVSQILMV----LKSPSQ---T  385 (703)
Q Consensus       319 ~~~~~~~~v~~~~~~~~i~~~~~~l~------~~~~~~ll~~~~~~~~~~~~~e~~~~~l~~~l~~----l~~~~~---~  385 (703)
                      +....+.+.++.+++..|+..+++|.      ...+..+++|+...+...++.|++|+|+..+|+.    +.....   +
T Consensus       124 ~dy~~~~~~LkslsPS~iDlEIRsL~~~~~~~~~~l~~Fl~~l~~~L~~~~dfElvQa~l~vFLk~Hgd~i~~~~~~~~L  203 (237)
T PF04192_consen  124 EDYSEFLEYLKSLSPSAIDLEIRSLSPESGGSYEELVSFLRFLTYRLKSRRDFELVQAYLSVFLKVHGDVIMESEEEEEL  203 (237)
T ss_pred             ccHHHHHHHHHhCChhHHHHHHHhccCccCCcHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCchHHH
Confidence            45677788888999999999999998      7788899999999999999999999999999999    444433   3


Q ss_pred             --hHHHHHHHHHHHHhhhhceecccC
Q psy7108         386 --TLVHLQRNLNKKYSDLAKISCQFD  409 (703)
Q Consensus       386 --~l~~L~~~l~~~~~~~~~l~~~~n  409 (703)
                        .+..+....++.|.++..+ ...+
T Consensus       204 ~~~l~~l~~~q~~~w~~L~~l-~~~~  228 (237)
T PF04192_consen  204 REALEELREAQESEWKRLDDL-FQYC  228 (237)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH-Hhhh
Confidence              8889999999999999888 5444

This preribosomal complex contains the U3 snoRNA and at least 40 proteins, which have the following properties: They are nucleolar. They are able to coimmunoprecipitate with the U3 snoRNA and Mpp10 (a protein specific to the SSU processome). They are required for 18S rRNA biogenesis. There appears to be a linkage between polymerase I transcription and the formation of the SSU processome; as some, but not all, of the SSU processome components are required for pre-rRNA transcription initiation. These SSU processome components have been termed t-Utps. They form a pre-complex with pre-18S rRNA in the absence of snoRNA U3 and other SSU processome components. It has been proposed that the t-Utp complex proteins are both rDNA and rRNA binding proteins that are involved in the initiation of pre18S rRNA transcription. Initially binding to rDNA then associating with the 5' end of the nascent pre18S rRNA. The t-Utpcomplex forms the nucleus around which the rest of the SSU processome components, including snoRNA U3, assemble []. From electron microscopy the SSU processome may correspond to the terminal knobs visualized at the 5' ends of nascent 18S rRNA. Utp21 is a component of the SSU processome, which is required for pre-18S rRNA processing. It interacts with Utp18 [].; GO: 0006364 rRNA processing, 0032040 small-subunit processome

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=96.70  E-value=0.077  Score=61.23  Aligned_cols=137  Identities=15%  Similarity=0.150  Sum_probs=89.0

Q ss_pred             CCEEEEE-eCCCcEEEEEcCCCceeEEEecCCCc-EEEEEEecC-------CCEEEEEECCCeEEEEEcCCCc-EEEEEe
Q psy7108          61 STGMVSA-SWDKTVKLWNAVETDTQHETIQLLSD-ALCVAYKPD-------GTEIVVATLDGQLIMFDVESAA-QVGSVE  130 (703)
Q Consensus        61 g~~L~sg-s~Dg~V~iWd~~~~~~~~~~~~~~~~-V~~v~~spd-------g~~las~s~dg~I~vwd~~~~~-~~~~~~  130 (703)
                      .++|+.- .....|.-.|++.++.+.....+... |..+  .|+       ...-+.|-.+..+..||.+-.. .+..-.
T Consensus       493 ~~mil~~~~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~--~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~  570 (794)
T PF08553_consen  493 RNMILLDPNNPNKLYKMDLERGKVVEEWKVHDDIPVVDI--APDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQ  570 (794)
T ss_pred             cceEeecCCCCCceEEEecCCCcEEEEeecCCCcceeEe--cccccccccCCCceEEEECCCceEEeccCCCCCceeecc
Confidence            3444443 34567888899888766555555433 4444  343       2345677788999999998543 111111


Q ss_pred             ccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeee
Q psy7108         131 ARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRK  210 (703)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  210 (703)
                      . ..+               ......+|++-+.+| +||+|+.+|.|++|| +.|..       ....+.+...+|..+.
T Consensus       571 ~-k~Y---------------~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd-~~g~~-------AKT~lp~lG~pI~~iD  625 (794)
T PF08553_consen  571 S-KQY---------------SSKNNFSCFATTEDG-YIAVGSNKGDIRLYD-RLGKR-------AKTALPGLGDPIIGID  625 (794)
T ss_pred             c-ccc---------------ccCCCceEEEecCCc-eEEEEeCCCcEEeec-ccchh-------hhhcCCCCCCCeeEEE
Confidence            1 111               112367888888777 699999999999999 33321       1223456678999999


Q ss_pred             eccCCCEEEEEccc
Q psy7108         211 MTEFGNVSLIETRE  224 (703)
Q Consensus       211 ~spdg~~l~~~~~~  224 (703)
                      .+.||++++++|..
T Consensus       626 vt~DGkwilaTc~t  639 (794)
T PF08553_consen  626 VTADGKWILATCKT  639 (794)
T ss_pred             ecCCCcEEEEeecc
Confidence            99999999988764

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=96.61  E-value=0.11  Score=56.57  Aligned_cols=193  Identities=10%  Similarity=0.020  Sum_probs=106.7

Q ss_pred             CCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcE-----EEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccC
Q psy7108          61 STGMVSASWDKTVKLWNAVETDTQHETIQLLSDA-----LCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDL  135 (703)
Q Consensus        61 g~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V-----~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~  135 (703)
                      +..++.++.++.+..+|.++++............     .+...  .+..++.++.++.+..+|..+|+.+-..+.....
T Consensus       160 ~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~sP~v--~~~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~  237 (394)
T PRK11138        160 DGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLRGESAPAT--AFGGAIVGGDNGRVSAVLMEQGQLIWQQRISQPT  237 (394)
T ss_pred             CCEEEEECCCCEEEEEEccCCCEeeeecCCCCcccccCCCCCEE--ECCEEEEEcCCCEEEEEEccCChhhheeccccCC
Confidence            3466677788999999999987665543221110     11111  1335677778999999999999876543321100


Q ss_pred             CCCCCCCccchhhcccCCccEEEEEEcC--CCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeecc
Q psy7108         136 DSGRLDTDLVTREQSLKAKAVSTVCYSA--DGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTE  213 (703)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~V~~i~~sp--dg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp  213 (703)
                        +..   .        ......+.-+|  .+..+++++.++.+..+|..+|+.+-+.....          ...+.  .
T Consensus       238 --~~~---~--------~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~----------~~~~~--~  292 (394)
T PRK11138        238 --GAT---E--------IDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRSGQIVWKREYGS----------VNDFA--V  292 (394)
T ss_pred             --Ccc---c--------hhcccccCCCcEEECCEEEEEEcCCeEEEEECCCCCEEEeecCCC----------ccCcE--E
Confidence              000   0        00001111122  24567777788999999999998765433111          01111  2


Q ss_pred             CCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCc-cceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecce
Q psy7108         214 FGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPE-VRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPF  288 (703)
Q Consensus       214 dg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~-~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~  288 (703)
                      .+..+++.+.++      .+...|..+|+.+-...... ....+...  .+..++.++.+| +.+.|..+|+.+...
T Consensus       293 ~~~~vy~~~~~g------~l~ald~~tG~~~W~~~~~~~~~~~sp~v--~~g~l~v~~~~G~l~~ld~~tG~~~~~~  361 (394)
T PRK11138        293 DGGRIYLVDQND------RVYALDTRGGVELWSQSDLLHRLLTAPVL--YNGYLVVGDSEGYLHWINREDGRFVAQQ  361 (394)
T ss_pred             ECCEEEEEcCCC------eEEEEECCCCcEEEcccccCCCcccCCEE--ECCEEEEEeCCCEEEEEECCCCCEEEEE
Confidence            344445544432      57777777776543222111 11112222  255778888899 999999999875544

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=96.60  E-value=0.29  Score=50.77  Aligned_cols=201  Identities=10%  Similarity=0.096  Sum_probs=114.2

Q ss_pred             EEEcCCCCCC-EEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEec
Q psy7108          53 IEFSPVLSST-GMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEA  131 (703)
Q Consensus        53 l~~sp~~dg~-~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~  131 (703)
                      ..|.+  +.. ++.+--..+.|.-|+..+++  .....+.+.+.++..-.++..|+++.  ..+.+++.+++.....+..
T Consensus        30 P~w~~--~~~~L~w~DI~~~~i~r~~~~~g~--~~~~~~p~~~~~~~~~d~~g~Lv~~~--~g~~~~~~~~~~~~t~~~~  103 (307)
T COG3386          30 PVWDP--DRGALLWVDILGGRIHRLDPETGK--KRVFPSPGGFSSGALIDAGGRLIACE--HGVRLLDPDTGGKITLLAE  103 (307)
T ss_pred             ccCcC--CCCEEEEEeCCCCeEEEecCCcCc--eEEEECCCCcccceeecCCCeEEEEc--cccEEEeccCCceeEEecc
Confidence            35777  555 44444566788888876553  34445555666665555555666653  4567777766655332222


Q ss_pred             cccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec-----------CCcEEEEECCCCceEEEEEeccCCccc
Q psy7108         132 RRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ-----------SKYICIYSSREGILLKKFTITQNKSLD  200 (703)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~-----------dg~I~lwD~~~~~~~~~~~~~~~~~~~  200 (703)
                      ...               .......+.+...|+|.+.++...           -|.++.+|. .+..++....       
T Consensus       104 ~~~---------------~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p-~g~~~~l~~~-------  160 (307)
T COG3386         104 PED---------------GLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDP-DGGVVRLLDD-------  160 (307)
T ss_pred             ccC---------------CCCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcC-CCCEEEeecC-------
Confidence            111               001124567778888887665333           133444444 3444443322       


Q ss_pred             cccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC--CCcc-----ceeecCCccceEEEEEcCCCCEEEEEeCCC
Q psy7108         201 GINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK--KGDM-----AARVLKPEVRVFCVKFSPTGQAWVAATTEG  273 (703)
Q Consensus       201 ~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~--~~~~-----~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg  273 (703)
                       +-..-+.++||||++.++++-+..     +.+.-++..  ++..     ........+..-.++...+|.+.+++..+|
T Consensus       161 -~~~~~NGla~SpDg~tly~aDT~~-----~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g  234 (307)
T COG3386         161 -DLTIPNGLAFSPDGKTLYVADTPA-----NRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGG  234 (307)
T ss_pred             -cEEecCceEECCCCCEEEEEeCCC-----CeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCC
Confidence             122457899999998777765532     355555443  2211     111222345667788888998886666654


Q ss_pred             --EEEEEcCCCceeccee
Q psy7108         274 --VHIYSLDSGYVFDPFL  289 (703)
Q Consensus       274 --v~iwd~~~~~~~~~~~  289 (703)
                        |.+|+.+ |+.+....
T Consensus       235 ~~v~~~~pd-G~l~~~i~  251 (307)
T COG3386         235 GRVVRFNPD-GKLLGEIK  251 (307)
T ss_pred             ceEEEECCC-CcEEEEEE
Confidence              9999988 77655444

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=96.60  E-value=0.85  Score=45.62  Aligned_cols=186  Identities=10%  Similarity=0.094  Sum_probs=107.3

Q ss_pred             cCeEEEEEcCCCCCCEEEEEeCCC--cEEEEEcCCCceeEEEecCCCcEE--EEEEecCCCEEEEEECCCeEEEEEcCCC
Q psy7108          48 GPVSCIEFSPVLSSTGMVSASWDK--TVKLWNAVETDTQHETIQLLSDAL--CVAYKPDGTEIVVATLDGQLIMFDVESA  123 (703)
Q Consensus        48 ~~V~~l~~sp~~dg~~L~sgs~Dg--~V~iWd~~~~~~~~~~~~~~~~V~--~v~~spdg~~las~s~dg~I~vwd~~~~  123 (703)
                      .-...+.|..  +|.++-|.+.-|  .|+.+|+.+++... .........  .++... ++...-.=.++...+||.++-
T Consensus        45 aFTQGL~~~~--~g~LyESTG~yG~S~l~~~d~~tg~~~~-~~~l~~~~FgEGit~~~-d~l~qLTWk~~~~f~yd~~tl  120 (264)
T PF05096_consen   45 AFTQGLEFLD--DGTLYESTGLYGQSSLRKVDLETGKVLQ-SVPLPPRYFGEGITILG-DKLYQLTWKEGTGFVYDPNTL  120 (264)
T ss_dssp             -EEEEEEEEE--TTEEEEEECSTTEEEEEEEETTTSSEEE-EEE-TTT--EEEEEEET-TEEEEEESSSSEEEEEETTTT
T ss_pred             ccCccEEecC--CCEEEEeCCCCCcEEEEEEECCCCcEEE-EEECCccccceeEEEEC-CEEEEEEecCCeEEEEccccc
Confidence            3456788866  788888888766  68899999886433 333333332  344442 233333345789999999999


Q ss_pred             cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCcccccc
Q psy7108         124 AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGIN  203 (703)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~  203 (703)
                      +.+.++.-..                     .=+.++  .|++.|+.+.....+..+|..+.+..+++....+...-   
T Consensus       121 ~~~~~~~y~~---------------------EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv---  174 (264)
T PF05096_consen  121 KKIGTFPYPG---------------------EGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPV---  174 (264)
T ss_dssp             EEEEEEE-SS---------------------S--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE----
T ss_pred             eEEEEEecCC---------------------cceEEE--cCCCEEEEECCccceEEECCcccceEEEEEEEECCEEC---
Confidence            9988886543                     235666  56777887777788999999998888887765432211   


Q ss_pred             ccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeec---------------CCccceEEEEEcCCCCEEEE
Q psy7108         204 DFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL---------------KPEVRVFCVKFSPTGQAWVA  268 (703)
Q Consensus       204 ~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~---------------~h~~~V~~l~~spdg~~l~s  268 (703)
                      ..++.+.+- +|.. .+.....     ..|..-|..+|+....+.               ....-.+.+++.|..+.|..
T Consensus       175 ~~LNELE~i-~G~I-yANVW~t-----d~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~v  247 (264)
T PF05096_consen  175 SNLNELEYI-NGKI-YANVWQT-----DRIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFV  247 (264)
T ss_dssp             --EEEEEEE-TTEE-EEEETTS-----SEEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEE
T ss_pred             CCcEeEEEE-cCEE-EEEeCCC-----CeEEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEE
Confidence            144555554 3432 2222111     145555666665543321               01345789999998877755


Q ss_pred             Ee
Q psy7108         269 AT  270 (703)
Q Consensus       269 ~s  270 (703)
                      .+
T Consensus       248 TG  249 (264)
T PF05096_consen  248 TG  249 (264)
T ss_dssp             EE
T ss_pred             Ee
Confidence            55

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>KOG1008|consensus

Probab=96.58  E-value=0.00041  Score=74.80  Aligned_cols=166  Identities=14%  Similarity=0.184  Sum_probs=107.4

Q ss_pred             cccCCCcCeEEEEEcCCCCCCEEEEEe----CCCcEEEEEcCCCc----eeEEEec-CCCcEEEEEEecCCCEEEEEECC
Q psy7108          42 VLSGHEGPVSCIEFSPVLSSTGMVSAS----WDKTVKLWNAVETD----TQHETIQ-LLSDALCVAYKPDGTEIVVATLD  112 (703)
Q Consensus        42 ~l~gH~~~V~~l~~sp~~dg~~L~sgs----~Dg~V~iWd~~~~~----~~~~~~~-~~~~V~~v~~spdg~~las~s~d  112 (703)
                      +..+|..+.++++|++. |.+.||.|-    .|..+.|||+.++-    ....+.. ......+++|..+.+.+.+|...
T Consensus        97 ~tp~~ar~Ct~lAwneL-Dtn~LAagldkhrnds~~~Iwdi~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~s  175 (783)
T KOG1008|consen   97 VTPGYARPCTSLAWNEL-DTNHLAAGLDKHRNDSSLKIWDINSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTS  175 (783)
T ss_pred             ecccccccccccccccc-cHHHHHhhhhhhcccCCccceecccccCCCccccccccccccCccccccccCcchhhccccc
Confidence            45678889999999996 778888873    45678999998761    1112222 34556789999888999999989


Q ss_pred             CeEEEEEcCCCc-EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC-CCCEEEEEecCCcEEEEEC-CCC-ceE
Q psy7108         113 GQLIMFDVESAA-QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA-DGSCILAAGQSKYICIYSS-REG-ILL  188 (703)
Q Consensus       113 g~I~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp-dg~~l~s~s~dg~I~lwD~-~~~-~~~  188 (703)
                      +.+.++|++... ....+.                      .+.+..+..+| .+.++++-. |+.|.+||. +.- .++
T Consensus       176 r~~~ifdlRqs~~~~~svn----------------------Tk~vqG~tVdp~~~nY~cs~~-dg~iAiwD~~rnienpl  232 (783)
T KOG1008|consen  176 RSVHIFDLRQSLDSVSSVN----------------------TKYVQGITVDPFSPNYFCSNS-DGDIAIWDTYRNIENPL  232 (783)
T ss_pred             chhhhhhhhhhhhhhhhhh----------------------hhhcccceecCCCCCceeccc-cCceeeccchhhhccHH
Confidence            999999997321 111111                      12466677788 677777655 899999993 322 122


Q ss_pred             EEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC
Q psy7108         189 KKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK  239 (703)
Q Consensus       189 ~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~  239 (703)
                      ..+....+.    ....+..++|+|....+.+....+  .  .+|+++|+.
T Consensus       233 ~~i~~~~N~----~~~~l~~~aycPtrtglla~l~Rd--S--~tIrlydi~  275 (783)
T KOG1008|consen  233 QIILRNENK----KPKQLFALAYCPTRTGLLAVLSRD--S--ITIRLYDIC  275 (783)
T ss_pred             HHHhhCCCC----cccceeeEEeccCCcchhhhhccC--c--ceEEEeccc
Confidence            222211221    112577889999876555444332  1  378888865

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=96.57  E-value=0.63  Score=50.22  Aligned_cols=214  Identities=13%  Similarity=0.171  Sum_probs=133.9

Q ss_pred             CeEEEEEcCCCCCCEEEEE-eCCCcEEEEEcCCCceeEEEecCC-CcEEEEEEecCCCEEEEE-ECCCeEEEEEcCCCcE
Q psy7108          49 PVSCIEFSPVLSSTGMVSA-SWDKTVKLWNAVETDTQHETIQLL-SDALCVAYKPDGTEIVVA-TLDGQLIMFDVESAAQ  125 (703)
Q Consensus        49 ~V~~l~~sp~~dg~~L~sg-s~Dg~V~iWd~~~~~~~~~~~~~~-~~V~~v~~spdg~~las~-s~dg~I~vwd~~~~~~  125 (703)
                      ....+...|  ++..+... .....+..-+.. ........... .....++.++++..+... ..++.|.+.|..+.+.
T Consensus        32 ~~~~v~~~~--~g~~~~v~~~~~~~~~~~~~~-~n~~~~~~~~g~~~p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~  108 (381)
T COG3391          32 GPGGVAVNP--DGTQVYVANSGSNDVSVIDAT-SNTVTQSLSVGGVYPAGVAVNPAGNKVYVTTGDSNTVSVIDTATNTV  108 (381)
T ss_pred             CCceeEEcC--ccCEEEEEeecCceeeecccc-cceeeeeccCCCccccceeeCCCCCeEEEecCCCCeEEEEcCcccce
Confidence            455677888  77544443 332345555543 22222222222 345678889988855544 4468999999877776


Q ss_pred             EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec---CCcEEEEECCCCceEEEEEeccCCccccc
Q psy7108         126 VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ---SKYICIYSSREGILLKKFTITQNKSLDGI  202 (703)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~---dg~I~lwD~~~~~~~~~~~~~~~~~~~~~  202 (703)
                      ........                     ....++++|+++.+.++..   ++++.+.|..+++...+.....       
T Consensus       109 ~~~~~vG~---------------------~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~-------  160 (381)
T COG3391         109 LGSIPVGL---------------------GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGN-------  160 (381)
T ss_pred             eeEeeecc---------------------CCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCC-------
Confidence            66554422                     3467999999988887654   6889999999888877733211       


Q ss_pred             cccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccce-e---ecCCccceEEEEEcCCCCEEEEEe-CC--C-E
Q psy7108         203 NDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAA-R---VLKPEVRVFCVKFSPTGQAWVAAT-TE--G-V  274 (703)
Q Consensus       203 ~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~-~---~~~h~~~V~~l~~spdg~~l~s~s-~D--g-v  274 (703)
                       .+ ..++++|+|+.+++....+     ..+.+.|........ .   ...-......+.++|+|+.+.... .+  + +
T Consensus       161 -~P-~~~a~~p~g~~vyv~~~~~-----~~v~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v  233 (381)
T COG3391         161 -TP-TGVAVDPDGNKVYVTNSDD-----NTVSVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNV  233 (381)
T ss_pred             -Cc-ceEEECCCCCeEEEEecCC-----CeEEEEeCCCcceeccccccccccCCCCceEEECCCCCEEEEEeccCCCceE
Confidence             12 6789999999777766332     378888866554332 1   112233456789999999764433 33  4 7


Q ss_pred             EEEEcCCCceecc-------eeeeEEEccchhh
Q psy7108         275 HIYSLDSGYVFDP-------FLLDISITPQSVK  300 (703)
Q Consensus       275 ~iwd~~~~~~~~~-------~~~~~~~spd~~~  300 (703)
                      .+.|..++.....       ....+.++|++..
T Consensus       234 ~~id~~~~~v~~~~~~~~~~~~~~v~~~p~g~~  266 (381)
T COG3391         234 LKIDTATGNVTATDLPVGSGAPRGVAVDPAGKA  266 (381)
T ss_pred             EEEeCCCceEEEeccccccCCCCceeECCCCCE
Confidence            7888877766443       1234677787743

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=96.50  E-value=0.81  Score=47.39  Aligned_cols=217  Identities=11%  Similarity=0.086  Sum_probs=119.2

Q ss_pred             EEEEEcCCCCCCEEEEE--eCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcC-CCcEEE
Q psy7108          51 SCIEFSPVLSSTGMVSA--SWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVE-SAAQVG  127 (703)
Q Consensus        51 ~~l~~sp~~dg~~L~sg--s~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~-~~~~~~  127 (703)
                      +..+++.  |+++++..  +---.|.|-|+..++.+ ......+...-.-+.+  ..+.+-|.||.+.-..++ .|+...
T Consensus        98 ~~~~ls~--dgk~~~V~N~TPa~SVtVVDl~~~kvv-~ei~~PGC~~iyP~~~--~~F~~lC~DGsl~~v~Ld~~Gk~~~  172 (342)
T PF06433_consen   98 NMFALSA--DGKFLYVQNFTPATSVTVVDLAAKKVV-GEIDTPGCWLIYPSGN--RGFSMLCGDGSLLTVTLDADGKEAQ  172 (342)
T ss_dssp             GGEEE-T--TSSEEEEEEESSSEEEEEEETTTTEEE-EEEEGTSEEEEEEEET--TEEEEEETTSCEEEEEETSTSSEEE
T ss_pred             cceEEcc--CCcEEEEEccCCCCeEEEEECCCCcee-eeecCCCEEEEEecCC--CceEEEecCCceEEEEECCCCCEeE
Confidence            3457777  88877765  33456778888776443 3334443332222222  457788889999999887 555543


Q ss_pred             EEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceE--EEEEeccCCc-cccc-c
Q psy7108         128 SVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILL--KKFTITQNKS-LDGI-N  203 (703)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~--~~~~~~~~~~-~~~~-~  203 (703)
                      ....-..  ..             ..-.+..-++...+..++-.+-+|.|+--|+......  ..+..-.... -.+. .
T Consensus       173 ~~t~~F~--~~-------------~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrP  237 (342)
T PF06433_consen  173 KSTKVFD--PD-------------DDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRP  237 (342)
T ss_dssp             EEEEESS--TT-------------TS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE
T ss_pred             eeccccC--CC-------------CcccccccceECCCCeEEEEecCCEEEEEeccCCcccccCcccccCccccccCcCC
Confidence            2211100  00             0001223344555556666778888888888765432  2222111000 0010 0


Q ss_pred             ccceeeeeccCCCEEEEEcccCC----CCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCC-EEEEEe-CCC-EEE
Q psy7108         204 DFINRRKMTEFGNVSLIETRETH----EGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQ-AWVAAT-TEG-VHI  276 (703)
Q Consensus       204 ~~v~~~~~spdg~~l~~~~~~~~----~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~-~l~s~s-~Dg-v~i  276 (703)
                      ..-.-+++++....+++-...+.    ...-..|-++|+.+++.+.++.- ...+.+++.+.|.+ .|++.+ .++ +.+
T Consensus       238 GG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l-~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v  316 (342)
T PF06433_consen  238 GGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPL-EHPIDSIAVSQDDKPLLYALSAGDGTLDV  316 (342)
T ss_dssp             -SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEEE-EEEESEEEEESSSS-EEEEEETTTTEEEE
T ss_pred             cceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEEeC-CCccceEEEccCCCcEEEEEcCCCCeEEE
Confidence            12344678776665555443332    22335777889999988877763 23577999999876 555544 467 999


Q ss_pred             EEcCCCceecce
Q psy7108         277 YSLDSGYVFDPF  288 (703)
Q Consensus       277 wd~~~~~~~~~~  288 (703)
                      ||..+|+.....
T Consensus       317 ~D~~tGk~~~~~  328 (342)
T PF06433_consen  317 YDAATGKLVRSI  328 (342)
T ss_dssp             EETTT--EEEEE
T ss_pred             EeCcCCcEEeeh
Confidence            999999876544

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=96.41  E-value=0.76  Score=50.04  Aligned_cols=49  Identities=12%  Similarity=0.265  Sum_probs=37.6

Q ss_pred             ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCC
Q psy7108          28 VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVET   81 (703)
Q Consensus        28 v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~   81 (703)
                      +.+++..|+++  ..+.--.+.|-++.|+.  + ..|+.-..||.++++|+...
T Consensus        63 I~iys~sG~ll--~~i~w~~~~iv~~~wt~--~-e~LvvV~~dG~v~vy~~~G~  111 (410)
T PF04841_consen   63 IQIYSSSGKLL--SSIPWDSGRIVGMGWTD--D-EELVVVQSDGTVRVYDLFGE  111 (410)
T ss_pred             EEEECCCCCEe--EEEEECCCCEEEEEECC--C-CeEEEEEcCCEEEEEeCCCc
Confidence            77788889988  55543348999999986  4 55666778999999998633

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>KOG4649|consensus

Probab=96.39  E-value=0.18  Score=49.26  Aligned_cols=111  Identities=18%  Similarity=0.117  Sum_probs=81.1

Q ss_pred             CCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCC
Q psy7108          60 SSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGR  139 (703)
Q Consensus        60 dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~  139 (703)
                      ...+++.||..+.+.--|..+++...+ ......+.+-+.- -|.+++.|+..|.+++.+.++|.+...+.....+    
T Consensus        22 skT~v~igSHs~~~~avd~~sG~~~We-~ilg~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~v----   95 (354)
T KOG4649|consen   22 SKTLVVIGSHSGIVIAVDPQSGNLIWE-AILGVRIECSAIV-VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETV----   95 (354)
T ss_pred             CceEEEEecCCceEEEecCCCCcEEee-hhhCceeeeeeEE-ECCEEEEEEccCcEEEEEecchhheeeeeehhhh----
Confidence            346777788888888888888754333 2234444443332 4778999999999999999999887776654431    


Q ss_pred             CCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEE
Q psy7108         140 LDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFT  192 (703)
Q Consensus       140 ~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~  192 (703)
                                     .+ .....+++..+..++.|++.+..|.++..++.+.+
T Consensus        96 ---------------k~-~a~~d~~~glIycgshd~~~yalD~~~~~cVyksk  132 (354)
T KOG4649|consen   96 ---------------KV-RAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSK  132 (354)
T ss_pred             ---------------cc-ceEEcCCCceEEEecCCCcEEEecccccceEEecc
Confidence                           12 23457789999999999999999999988887754

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=96.36  E-value=0.3  Score=50.60  Aligned_cols=188  Identities=13%  Similarity=0.109  Sum_probs=104.9

Q ss_pred             CeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEec-----CCCcEEEEEEecCCCEEEEEEC-----C----Ce
Q psy7108          49 PVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQ-----LLSDALCVAYKPDGTEIVVATL-----D----GQ  114 (703)
Q Consensus        49 ~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~-----~~~~V~~v~~spdg~~las~s~-----d----g~  114 (703)
                      .+.++..-.  .+..|+++..  -+.+++.+++.....+..     .....+.+...|+|.+.++...     .    ..
T Consensus        67 ~~~~~~~~d--~~g~Lv~~~~--g~~~~~~~~~~~~t~~~~~~~~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~  142 (307)
T COG3386          67 GFSSGALID--AGGRLIACEH--GVRLLDPDTGGKITLLAEPEDGLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPT  142 (307)
T ss_pred             Ccccceeec--CCCeEEEEcc--ccEEEeccCCceeEEeccccCCCCcCCCCceeEcCCCCEEEeCCCccccCccccCCc
Confidence            334444433  4555665543  456777755544222222     1234567888999987665433     0    11


Q ss_pred             EEEEEcC-CCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec-CCcEEEEECCC--CceE--
Q psy7108         115 LIMFDVE-SAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ-SKYICIYSSRE--GILL--  188 (703)
Q Consensus       115 I~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~-dg~I~lwD~~~--~~~~--  188 (703)
                      -.+|-++ .+.....+..+-.                    .-+.++||||++.+..+.. .+.|.-|++..  +..-  
T Consensus       143 G~lyr~~p~g~~~~l~~~~~~--------------------~~NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~  202 (307)
T COG3386         143 GSLYRVDPDGGVVRLLDDDLT--------------------IPNGLAFSPDGKTLYVADTPANRIHRYDLDPATGPIGGR  202 (307)
T ss_pred             ceEEEEcCCCCEEEeecCcEE--------------------ecCceEECCCCCEEEEEeCCCCeEEEEecCcccCccCCc
Confidence            1344444 4555444444221                    3467999999988887754 47788887752  1111  


Q ss_pred             EEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEc-CCCCEE-
Q psy7108         189 KKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFS-PTGQAW-  266 (703)
Q Consensus       189 ~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~s-pdg~~l-  266 (703)
                      ..+...     +........++...+|.+.+.+...+     ..|..|+.. |+.+..+.-+...+++++|- |+.+.| 
T Consensus       203 ~~~~~~-----~~~~G~PDG~~vDadG~lw~~a~~~g-----~~v~~~~pd-G~l~~~i~lP~~~~t~~~FgG~~~~~L~  271 (307)
T COG3386         203 RGFVDF-----DEEPGLPDGMAVDADGNLWVAAVWGG-----GRVVRFNPD-GKLLGEIKLPVKRPTNPAFGGPDLNTLY  271 (307)
T ss_pred             ceEEEc-----cCCCCCCCceEEeCCCCEEEecccCC-----ceEEEECCC-CcEEEEEECCCCCCccceEeCCCcCEEE
Confidence            001000     00112444577778888765433322     268888887 88888877776778888884 455665 


Q ss_pred             EEEeC
Q psy7108         267 VAATT  271 (703)
Q Consensus       267 ~s~s~  271 (703)
                      +|+..
T Consensus       272 iTs~~  276 (307)
T COG3386         272 ITSAR  276 (307)
T ss_pred             EEecC
Confidence            44433

>smart00320 WD40 WD40 repeats

Probab=96.31  E-value=0.012  Score=38.58  Aligned_cols=36  Identities=25%  Similarity=0.391  Sum_probs=31.0

Q ss_pred             eEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEE
Q psy7108          84 QHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFD  119 (703)
Q Consensus        84 ~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd  119 (703)
                      ......|...|.++.|.+++..+++++.|+.+++||
T Consensus         5 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        5 LKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             EEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            344456788999999999999999999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=96.26  E-value=0.78  Score=45.92  Aligned_cols=169  Identities=11%  Similarity=0.088  Sum_probs=87.5

Q ss_pred             cCCCcEEEEEEecCCC-EEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCE
Q psy7108          89 QLLSDALCVAYKPDGT-EIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSC  167 (703)
Q Consensus        89 ~~~~~V~~v~~spdg~-~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~  167 (703)
                      +....+..++|.|+.+ ++++....+.|..++. +|+.++.+.-...                   +-...|++..++.+
T Consensus        19 g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~-------------------~D~EgI~y~g~~~~   78 (248)
T PF06977_consen   19 GILDELSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGF-------------------GDYEGITYLGNGRY   78 (248)
T ss_dssp             T--S-EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS--------------------SSEEEEEE-STTEE
T ss_pred             CccCCccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCC-------------------CCceeEEEECCCEE
Confidence            3455699999999866 4555566778888886 4777777654321                   24788999988888


Q ss_pred             EEEEecCCcEEEEECCCCc---eE---EEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC-C
Q psy7108         168 ILAAGQSKYICIYSSREGI---LL---KKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK-K  240 (703)
Q Consensus       168 l~s~s~dg~I~lwD~~~~~---~~---~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~-~  240 (703)
                      +++.-+++.+.++++....   ..   ..+.....   ...+..+..++|++.++.++++....    ...+.-++.. .
T Consensus        79 vl~~Er~~~L~~~~~~~~~~~~~~~~~~~~~l~~~---~~~N~G~EGla~D~~~~~L~v~kE~~----P~~l~~~~~~~~  151 (248)
T PF06977_consen   79 VLSEERDQRLYIFTIDDDTTSLDRADVQKISLGFP---NKGNKGFEGLAYDPKTNRLFVAKERK----PKRLYEVNGFPG  151 (248)
T ss_dssp             EEEETTTTEEEEEEE----TT--EEEEEEEE---S------SS--EEEEEETTTTEEEEEEESS----SEEEEEEESTT-
T ss_pred             EEEEcCCCcEEEEEEeccccccchhhceEEecccc---cCCCcceEEEEEcCCCCEEEEEeCCC----ChhhEEEccccC
Confidence            7777678999999884321   11   22221111   12234577899999988877764322    1122222220 1


Q ss_pred             Ccccee--------ecCCccceEEEEEcCCCCEEEEEeCCC--EEEEEcCCCcee
Q psy7108         241 GDMAAR--------VLKPEVRVFCVKFSPTGQAWVAATTEG--VHIYSLDSGYVF  285 (703)
Q Consensus       241 ~~~~~~--------~~~h~~~V~~l~~spdg~~l~s~s~Dg--v~iwd~~~~~~~  285 (703)
                      ......        ....-..+.+++++|....|..-|...  +..+| .+|+..
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~  205 (248)
T PF06977_consen  152 GFDLFVSDDQDLDDDKLFVRDLSGLSYDPRTGHLLILSDESRLLLELD-RQGRVV  205 (248)
T ss_dssp             SS--EEEE-HHHH-HT--SS---EEEEETTTTEEEEEETTTTEEEEE--TT--EE
T ss_pred             ccceeeccccccccccceeccccceEEcCCCCeEEEEECCCCeEEEEC-CCCCEE
Confidence            111110        111234578899999876665545444  77777 445543

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>PRK13616 lipoprotein LpqB; Provisional

Probab=96.25  E-value=0.13  Score=58.39  Aligned_cols=157  Identities=9%  Similarity=0.110  Sum_probs=85.0

Q ss_pred             CcEEEEEEecCCCEEEEEEC------CC--eEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC
Q psy7108          92 SDALCVAYKPDGTEIVVATL------DG--QLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA  163 (703)
Q Consensus        92 ~~V~~v~~spdg~~las~s~------dg--~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp  163 (703)
                      ..+.+.+++|||+.++....      |.  .|.+++.. +.......+.                      ..+.-.|+|
T Consensus       350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~g-g~~~~lt~g~----------------------~~t~PsWsp  406 (591)
T PRK13616        350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLG-GVAVQVLEGH----------------------SLTRPSWSL  406 (591)
T ss_pred             cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCC-CcceeeecCC----------------------CCCCceECC
Confidence            46788999999998877652      33  45555642 2222222221                      356789999


Q ss_pred             CCCEEEEEecCCc-EEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEEC---CCCC
Q psy7108         164 DGSCILAAGQSKY-ICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKL---PGVK  239 (703)
Q Consensus       164 dg~~l~s~s~dg~-I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~i---wd~~  239 (703)
                      ||+.+.+.+.... +++.+-.....+.................|..+.|||||+.+++....       .|.+   -...
T Consensus       407 DG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~~~~g~Issl~wSpDG~RiA~i~~g-------~v~Va~Vvr~~  479 (591)
T PRK13616        407 DADAVWVVVDGNTVVRVIRDPATGQLARTPVDASAVASRVPGPISELQLSRDGVRAAMIIGG-------KVYLAVVEQTE  479 (591)
T ss_pred             CCCceEEEecCcceEEEeccCCCceEEEEeccCchhhhccCCCcCeEEECCCCCEEEEEECC-------EEEEEEEEeCC
Confidence            9988887754322 333332221122222211111110123479999999999998886631       3444   2323


Q ss_pred             CCcc-c---eee-cCCccceEEEEEcCCCCEEEEEeCCC-EEEEEc
Q psy7108         240 KGDM-A---ARV-LKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSL  279 (703)
Q Consensus       240 ~~~~-~---~~~-~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~  279 (703)
                      .|+. +   ..+ ..-...+.++.|.+++..+ ++..++ ..+|.+
T Consensus       480 ~G~~~l~~~~~l~~~l~~~~~~l~W~~~~~L~-V~~~~~~~~v~~v  524 (591)
T PRK13616        480 DGQYALTNPREVGPGLGDTAVSLDWRTGDSLV-VGRSDPEHPVWYV  524 (591)
T ss_pred             CCceeecccEEeecccCCccccceEecCCEEE-EEecCCCCceEEE
Confidence            3431 0   111 2233346889999999854 555444 444443

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=96.21  E-value=0.1  Score=60.29  Aligned_cols=144  Identities=12%  Similarity=0.073  Sum_probs=94.0

Q ss_pred             CEEEEE-ECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC-------CCEEEEEecCC
Q psy7108         104 TEIVVA-TLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD-------GSCILAAGQSK  175 (703)
Q Consensus       104 ~~las~-s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd-------g~~l~s~s~dg  175 (703)
                      ++|+.- .....|+-.|++.|+.+..+..+.+.                   +|..  +.|+       ....+.|-.++
T Consensus       494 ~mil~~~~~~~~ly~mDLe~GKVV~eW~~~~~~-------------------~v~~--~~p~~K~aqlt~e~tflGls~n  552 (794)
T PF08553_consen  494 NMILLDPNNPNKLYKMDLERGKVVEEWKVHDDI-------------------PVVD--IAPDSKFAQLTNEQTFLGLSDN  552 (794)
T ss_pred             ceEeecCCCCCceEEEecCCCcEEEEeecCCCc-------------------ceeE--ecccccccccCCCceEEEECCC
Confidence            444433 34578999999999999999987751                   2333  3343       23345677788


Q ss_pred             cEEEEECCCCc-eEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccce
Q psy7108         176 YICIYSSREGI-LLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRV  254 (703)
Q Consensus       176 ~I~lwD~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V  254 (703)
                      .+..||+|-.. .+..-..+.   . .......|++-+.+|.. ++++..|      .||+||.-..+....+.+-..+|
T Consensus       553 ~lfriDpR~~~~k~v~~~~k~---Y-~~~~~Fs~~aTt~~G~i-avgs~~G------~IRLyd~~g~~AKT~lp~lG~pI  621 (794)
T PF08553_consen  553 SLFRIDPRLSGNKLVDSQSKQ---Y-SSKNNFSCFATTEDGYI-AVGSNKG------DIRLYDRLGKRAKTALPGLGDPI  621 (794)
T ss_pred             ceEEeccCCCCCceeeccccc---c-ccCCCceEEEecCCceE-EEEeCCC------cEEeecccchhhhhcCCCCCCCe
Confidence            99999998642 111111111   0 11235667777777764 5555543      69999954333344455668899


Q ss_pred             EEEEEcCCCCEEEEEeCCCEEEEEc
Q psy7108         255 FCVKFSPTGQAWVAATTEGVHIYSL  279 (703)
Q Consensus       255 ~~l~~spdg~~l~s~s~Dgv~iwd~  279 (703)
                      .+|+.+.||+++++.+..-+.+++.
T Consensus       622 ~~iDvt~DGkwilaTc~tyLlLi~t  646 (794)
T PF08553_consen  622 IGIDVTADGKWILATCKTYLLLIDT  646 (794)
T ss_pred             eEEEecCCCcEEEEeecceEEEEEE
Confidence            9999999999998888766777775

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>PRK13604 luxD acyl transferase; Provisional

Probab=96.08  E-value=0.0022  Score=65.66  Aligned_cols=55  Identities=15%  Similarity=0.112  Sum_probs=42.7

Q ss_pred             cccCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhhhcc
Q psy7108         526 LGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLG  586 (703)
Q Consensus       526 ~g~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~  586 (703)
                      .|..|+.++++|+.+. +..+++++|||+||..+.++.+..     .++..++++|.+.+.
T Consensus        90 ~g~~Dl~aaid~lk~~-~~~~I~LiG~SmGgava~~~A~~~-----~v~~lI~~sp~~~l~  144 (307)
T PRK13604         90 IGKNSLLTVVDWLNTR-GINNLGLIAASLSARIAYEVINEI-----DLSFLITAVGVVNLR  144 (307)
T ss_pred             ccHHHHHHHHHHHHhc-CCCceEEEEECHHHHHHHHHhcCC-----CCCEEEEcCCcccHH
Confidence            4678999999999876 457899999999998765544422     277788899887644

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=96.02  E-value=0.88  Score=50.88  Aligned_cols=210  Identities=15%  Similarity=0.141  Sum_probs=116.7

Q ss_pred             CCEEEEEeCCCcEEEEEcCCCceeEEEecCCC------cEE--EEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEecc
Q psy7108          61 STGMVSASWDKTVKLWNAVETDTQHETIQLLS------DAL--CVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEAR  132 (703)
Q Consensus        61 g~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~------~V~--~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~  132 (703)
                      +..++.++.++.+...|..+++...+......      .+.  .++.. ++..++.++.++.|.-+|.++|+.+-.....
T Consensus        61 ~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~-~~~~V~v~~~~g~v~AlD~~TG~~~W~~~~~  139 (488)
T cd00216          61 DGDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYW-DPRKVFFGTFDGRLVALDAETGKQVWKFGNN  139 (488)
T ss_pred             CCEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEc-cCCeEEEecCCCeEEEEECCCCCEeeeecCC
Confidence            45677788889999999988876544432211      111  11111 2267788888999999999999988776543


Q ss_pred             ccCCCCCCCCccchhhcccCCccEE-EEEEcCCCCEEEEEe---------cCCcEEEEECCCCceEEEEEeccCC--ccc
Q psy7108         133 RDLDSGRLDTDLVTREQSLKAKAVS-TVCYSADGSCILAAG---------QSKYICIYSSREGILLKKFTITQNK--SLD  200 (703)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~V~-~i~~spdg~~l~s~s---------~dg~I~lwD~~~~~~~~~~~~~~~~--~~~  200 (703)
                      .....               ...+. +..+.  +..++.++         .++.+..+|..+|+.+-++......  ...
T Consensus       140 ~~~~~---------------~~~i~ssP~v~--~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~~~~~~~~~  202 (488)
T cd00216         140 DQVPP---------------GYTMTGAPTIV--KKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYTTEPDPNAFP  202 (488)
T ss_pred             CCcCc---------------ceEecCCCEEE--CCEEEEeccccccccCCCCcEEEEEECCCCceeeEeeccCCCcCCCC
Confidence            21000               00000 11111  23444443         3678999999999988776643211  000


Q ss_pred             cc-----------cccceeeeeccCCCEEEEEcccCC------------CCCeeEEECCCCCCCccceeecC--Ccc---
Q psy7108         201 GI-----------NDFINRRKMTEFGNVSLIETRETH------------EGGNVVLKLPGVKKGDMAARVLK--PEV---  252 (703)
Q Consensus       201 ~~-----------~~~v~~~~~spdg~~l~~~~~~~~------------~~~~~~i~iwd~~~~~~~~~~~~--h~~---  252 (703)
                      ..           ...-.+.++.+.+..+++++.++.            ......+.-.|.++|+..-....  |..   
T Consensus       203 ~~~~~~~~~~~~g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~~~~~~~~~~  282 (488)
T cd00216         203 TWGPDRQMWGPGGGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQTTPHDLWDY  282 (488)
T ss_pred             CCCCCcceecCCCCCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEeeCCCCCCccc
Confidence            00           001123455555666777665431            11123678889999987665432  211   


Q ss_pred             -ceEEEEEc----CCCC---EEEEEeCCC-EEEEEcCCCceecce
Q psy7108         253 -RVFCVKFS----PTGQ---AWVAATTEG-VHIYSLDSGYVFDPF  288 (703)
Q Consensus       253 -~V~~l~~s----pdg~---~l~s~s~Dg-v~iwd~~~~~~~~~~  288 (703)
                       ......+.    -+|.   .++.++.+| +...|..+|+.+-..
T Consensus       283 ~~~s~p~~~~~~~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~  327 (488)
T cd00216         283 DGPNQPSLADIKPKDGKPVPAIVHAPKNGFFYVLDRTTGKLISAR  327 (488)
T ss_pred             ccCCCCeEEeccccCCCeeEEEEEECCCceEEEEECCCCcEeeEe
Confidence             00000111    1333   567788888 999999999875433

The alignment model contains an 8-bladed beta-propeller.

>PRK13604 luxD acyl transferase; Provisional

Probab=95.91  E-value=0.0066  Score=62.25  Aligned_cols=53  Identities=15%  Similarity=0.098  Sum_probs=43.5

Q ss_pred             eecchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccccc
Q psy7108         609 GLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFL  667 (703)
Q Consensus       609 ~~~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~  667 (703)
                      +.+|+.+.++|+.+. +..++.++|||||+.++.+.+...+     ++.+++++|++.+
T Consensus        91 g~~Dl~aaid~lk~~-~~~~I~LiG~SmGgava~~~A~~~~-----v~~lI~~sp~~~l  143 (307)
T PRK13604         91 GKNSLLTVVDWLNTR-GINNLGLIAASLSARIAYEVINEID-----LSFLITAVGVVNL  143 (307)
T ss_pred             cHHHHHHHHHHHHhc-CCCceEEEEECHHHHHHHHHhcCCC-----CCEEEEcCCcccH
Confidence            579999999999876 4568999999999999876666432     7778999999874

>KOG3617|consensus

Probab=95.89  E-value=0.014  Score=65.12  Aligned_cols=108  Identities=13%  Similarity=0.194  Sum_probs=82.2

Q ss_pred             EEEEcCCCCCCEEEEEe----CCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEE
Q psy7108          52 CIEFSPVLSSTGMVSAS----WDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVG  127 (703)
Q Consensus        52 ~l~~sp~~dg~~L~sgs----~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~  127 (703)
                      -.+|+|  ...+++.++    ..|.|.|+- ++|++.. -....-.+++++|+|..-.|+.|=.-|.+.+|...+.+...
T Consensus        20 i~SWHP--sePlfAVA~fS~er~GSVtIfa-dtGEPqr-~Vt~P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~ht   95 (1416)
T KOG3617|consen   20 ISSWHP--SEPLFAVASFSPERGGSVTIFA-DTGEPQR-DVTYPVHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHT   95 (1416)
T ss_pred             ccccCC--CCceeEEEEecCCCCceEEEEe-cCCCCCc-ccccceehhhhccChHHHHHhhccccceeEEEecCCceeee
Confidence            357888  888888775    357888875 4554222 22223345679999998888998888999999988776655


Q ss_pred             EEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECC
Q psy7108         128 SVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSR  183 (703)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~  183 (703)
                      ....|..                    ++..+.||++|..++++..-|.+.+|...
T Consensus        96 v~~th~a--------------------~i~~l~wS~~G~~l~t~d~~g~v~lwr~d  131 (1416)
T KOG3617|consen   96 VVETHPA--------------------PIQGLDWSHDGTVLMTLDNPGSVHLWRYD  131 (1416)
T ss_pred             eccCCCC--------------------CceeEEecCCCCeEEEcCCCceeEEEEee
Confidence            5555544                    89999999999999999999999999765

>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I

Probab=95.83  E-value=0.0034  Score=69.78  Aligned_cols=116  Identities=12%  Similarity=0.089  Sum_probs=72.3

Q ss_pred             ccCchhhhhcccCCchhhHHHhHcc-CCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhhhcccccchhhhc
Q psy7108         517 QLKSTRMNELGLYDTTATIDYILNQ-TGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLGNLVTKDMLE  595 (703)
Q Consensus       517 ~~~~~~~~~~g~~d~~~~~~~i~~~-~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  595 (703)
                      ..++|+++-+++..-    -||+.. ++++.+-++.  ..|+.|++.--+++..+.                        
T Consensus       186 ~~~~PlLiVp~~i~k----~yilDL~p~~Slv~~L~--~qGf~V~~iDwrgpg~s~------------------------  235 (532)
T TIGR01838       186 VHKTPLLIVPPWINK----YYILDLRPQNSLVRWLV--EQGHTVFVISWRNPDASQ------------------------  235 (532)
T ss_pred             CCCCcEEEECccccc----ceeeecccchHHHHHHH--HCCcEEEEEECCCCCccc------------------------
Confidence            356778888876422    344432 2334444444  445666664444433211                        


Q ss_pred             ccccceeeeeeeeeecchHHHHHHHHhhCCCCceEEEEeChhHHHHHHH----hcCCchHHHHHHHheecccccccCC
Q psy7108         596 GLYGIYALNIFQVGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIA----GSLRPEYQTKVRLNVLWAQSAFLGN  669 (703)
Q Consensus       596 ~~~~~~~~s~~e~~~~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~----~s~~~~~~~~i~~~~~l~p~~~~~~  669 (703)
                           ..+++++.+..++++.+++|+..+|.++++.+|||+||++..++    .+.++  .++|+.++.++...-+..
T Consensus       236 -----~~~~~ddY~~~~i~~al~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~--~~rv~slvll~t~~Df~~  306 (532)
T TIGR01838       236 -----ADKTFDDYIRDGVIAALEVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGD--DKRIKSATFFTTLLDFSD  306 (532)
T ss_pred             -----ccCChhhhHHHHHHHHHHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCC--CCccceEEEEecCcCCCC
Confidence                 12346677777899999999999999999999999999986432    23221  135888888876555543

This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.

>COG2267 PldB Lysophospholipase [Lipid metabolism]

Probab=95.81  E-value=0.0023  Score=66.40  Aligned_cols=55  Identities=25%  Similarity=0.248  Sum_probs=39.0

Q ss_pred             CCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhhhcc
Q psy7108         529 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLG  586 (703)
Q Consensus       529 ~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~  586 (703)
                      -|+.+.++.+.......+++++|||+||..+..++.+.+   .++...+..+|...+.
T Consensus        91 ~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~---~~i~~~vLssP~~~l~  145 (298)
T COG2267          91 DDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYP---PRIDGLVLSSPALGLG  145 (298)
T ss_pred             HHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCC---ccccEEEEECccccCC
Confidence            344455555555434579999999999998877776655   6777778878765555

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=95.73  E-value=0.59  Score=51.07  Aligned_cols=117  Identities=16%  Similarity=0.175  Sum_probs=75.1

Q ss_pred             EEEEEecCCCEEEEE-ECCC----eEEEEEcCCCcEEEEE-eccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEE
Q psy7108          95 LCVAYKPDGTEIVVA-TLDG----QLIMFDVESAAQVGSV-EARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCI  168 (703)
Q Consensus        95 ~~v~~spdg~~las~-s~dg----~I~vwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l  168 (703)
                      ...++||||+++|.+ +..|    .++++|+++++.+... ...                      ....++|.+|++.|
T Consensus       127 ~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~----------------------~~~~~~W~~d~~~~  184 (414)
T PF02897_consen  127 GGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENP----------------------KFSSVSWSDDGKGF  184 (414)
T ss_dssp             EEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEE----------------------ESEEEEECTTSSEE
T ss_pred             eeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCccccc----------------------ccceEEEeCCCCEE
Confidence            357899999998876 3334    4999999999776432 221                      12349999999887


Q ss_pred             EEEecC-----------CcEEEEECCCCceE--EEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEEC
Q psy7108         169 LAAGQS-----------KYICIYSSREGILL--KKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKL  235 (703)
Q Consensus       169 ~s~s~d-----------g~I~lwD~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~i  235 (703)
                      +....+           ..|+.|.+.+....  ..+......      .....+..++|++++++....+..  ...+.+
T Consensus       185 ~y~~~~~~~~~~~~~~~~~v~~~~~gt~~~~d~lvfe~~~~~------~~~~~~~~s~d~~~l~i~~~~~~~--~s~v~~  256 (414)
T PF02897_consen  185 FYTRFDEDQRTSDSGYPRQVYRHKLGTPQSEDELVFEEPDEP------FWFVSVSRSKDGRYLFISSSSGTS--ESEVYL  256 (414)
T ss_dssp             EEEECSTTTSS-CCGCCEEEEEEETTS-GGG-EEEEC-TTCT------TSEEEEEE-TTSSEEEEEEESSSS--EEEEEE
T ss_pred             EEEEeCcccccccCCCCcEEEEEECCCChHhCeeEEeecCCC------cEEEEEEecCcccEEEEEEEcccc--CCeEEE
Confidence            765432           23888888776432  444433321      024578899999998887765433  256777


Q ss_pred             CCCCCC
Q psy7108         236 PGVKKG  241 (703)
Q Consensus       236 wd~~~~  241 (703)
                      .|+..+
T Consensus       257 ~d~~~~  262 (414)
T PF02897_consen  257 LDLDDG  262 (414)
T ss_dssp             EECCCT
T ss_pred             Eecccc
Confidence            777764

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=95.63  E-value=3  Score=42.49  Aligned_cols=203  Identities=9%  Similarity=0.145  Sum_probs=110.1

Q ss_pred             cCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEE--------------EecCCCcEEEEE--EecCCCEEEEEEC
Q psy7108          48 GPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHE--------------TIQLLSDALCVA--YKPDGTEIVVATL  111 (703)
Q Consensus        48 ~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~--------------~~~~~~~V~~v~--~spdg~~las~s~  111 (703)
                      .+|..+...|  +-+.|+.-+ |+.+.++++..-.....              .......+...+  -.+.+...++...
T Consensus        36 ~~I~ql~vl~--~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~  112 (275)
T PF00780_consen   36 SSITQLSVLP--ELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAV  112 (275)
T ss_pred             ceEEEEEEec--ccCEEEEEc-CCccEEEEchhhccccccccccccccccccccccccCCeeEEeeccccccceEEEEEE
Confidence            3499999999  777776665 49999999865432221              122233455544  1233333334444


Q ss_pred             CCeEEEEEcCCC-----cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCc
Q psy7108         112 DGQLIMFDVESA-----AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGI  186 (703)
Q Consensus       112 dg~I~vwd~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~  186 (703)
                      .++|.+|.....     +..+.+.-.                     ..+.+++|.  ++.++.|.. +...+.|+.++.
T Consensus       113 kk~i~i~~~~~~~~~f~~~~ke~~lp---------------------~~~~~i~~~--~~~i~v~~~-~~f~~idl~~~~  168 (275)
T PF00780_consen  113 KKKILIYEWNDPRNSFSKLLKEISLP---------------------DPPSSIAFL--GNKICVGTS-KGFYLIDLNTGS  168 (275)
T ss_pred             CCEEEEEEEECCcccccceeEEEEcC---------------------CCcEEEEEe--CCEEEEEeC-CceEEEecCCCC
Confidence            568888877653     233444333                     267889998  566777765 448889999776


Q ss_pred             eEEEEEeccCC----ccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccce-eecCCccceEEEEEcC
Q psy7108         187 LLKKFTITQNK----SLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAA-RVLKPEVRVFCVKFSP  261 (703)
Q Consensus       187 ~~~~~~~~~~~----~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~-~~~~h~~~V~~l~~sp  261 (703)
                      ....+......    .......++..+.. +++.+++.-..        .-.+.|. .|+..+ ....-...+.++++. 
T Consensus       169 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~e~Ll~~~~--------~g~fv~~-~G~~~r~~~i~W~~~p~~~~~~-  237 (275)
T PF00780_consen  169 PSELLDPSDSSSSFKSRNSSSKPLGIFQL-SDNEFLLCYDN--------IGVFVNK-NGEPSRKSTIQWSSAPQSVAYS-  237 (275)
T ss_pred             ceEEeCccCCcchhhhcccCCCceEEEEe-CCceEEEEecc--------eEEEEcC-CCCcCcccEEEcCCchhEEEEE-
Confidence            65444322211    00000112222222 33444443221        1111222 333222 111223345566663 


Q ss_pred             CCCEEEEEeCCCEEEEEcCCCceeccee
Q psy7108         262 TGQAWVAATTEGVHIYSLDSGYVFDPFL  289 (703)
Q Consensus       262 dg~~l~s~s~Dgv~iwd~~~~~~~~~~~  289 (703)
                       ..++++.+.++|.||++.+++..+...
T Consensus       238 -~pyli~~~~~~iEV~~~~~~~lvQ~i~  264 (275)
T PF00780_consen  238 -SPYLIAFSSNSIEVRSLETGELVQTIP  264 (275)
T ss_pred             -CCEEEEECCCEEEEEECcCCcEEEEEE
Confidence             458888887779999999998766554

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>PLN02733 phosphatidylcholine-sterol O-acyltransferase

Probab=95.62  E-value=0.015  Score=63.28  Aligned_cols=54  Identities=17%  Similarity=0.214  Sum_probs=46.5

Q ss_pred             cchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCch-HHHHHHHheecccc
Q psy7108         611 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPE-YQTKVRLNVLWAQS  664 (703)
Q Consensus       611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~-~~~~i~~~~~l~p~  664 (703)
                      -++.+.|+.++...+..++++||||||+.+...++..+|+ +...|+.+|++|+.
T Consensus       146 ~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p~~~~k~I~~~I~la~P  200 (440)
T PLN02733        146 DGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHSDVFEKYVNSWIAIAAP  200 (440)
T ss_pred             HHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCCHhHHhHhccEEEECCC
Confidence            3577889988888888899999999999999988888785 56789999999864

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=95.60  E-value=1.5  Score=49.11  Aligned_cols=193  Identities=11%  Similarity=0.137  Sum_probs=103.3

Q ss_pred             CCcEEEEEcCCCceeEEEecCCC--------------------cE-EEEEEecCCCEEEEEECCC---------------
Q psy7108          70 DKTVKLWNAVETDTQHETIQLLS--------------------DA-LCVAYKPDGTEIVVATLDG---------------  113 (703)
Q Consensus        70 Dg~V~iWd~~~~~~~~~~~~~~~--------------------~V-~~v~~spdg~~las~s~dg---------------  113 (703)
                      ++.+...|..+++..........                    .+ ...++.+.+..++.++.++               
T Consensus       174 ~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~  253 (488)
T cd00216         174 RGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNL  253 (488)
T ss_pred             CcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCC
Confidence            57788889988876654432111                    11 1244555566777776665               


Q ss_pred             ---eEEEEEcCCCcEEEEEecccc-CCCCCCCCccchhhcccCCcc-EEEEEEcCCCC---EEEEEecCCcEEEEECCCC
Q psy7108         114 ---QLIMFDVESAAQVGSVEARRD-LDSGRLDTDLVTREQSLKAKA-VSTVCYSADGS---CILAAGQSKYICIYSSREG  185 (703)
Q Consensus       114 ---~I~vwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-V~~i~~spdg~---~l~s~s~dg~I~lwD~~~~  185 (703)
                         .|.-+|.++|+.+-..+.... ....           .....+ +..+. .-+|.   .+++++.+|.+...|.++|
T Consensus       254 ~~~~l~Ald~~tG~~~W~~~~~~~~~~~~-----------~~~s~p~~~~~~-~~~g~~~~~V~~g~~~G~l~ald~~tG  321 (488)
T cd00216         254 YTDSIVALDADTGKVKWFYQTTPHDLWDY-----------DGPNQPSLADIK-PKDGKPVPAIVHAPKNGFFYVLDRTTG  321 (488)
T ss_pred             ceeeEEEEcCCCCCEEEEeeCCCCCCccc-----------ccCCCCeEEecc-ccCCCeeEEEEEECCCceEEEEECCCC
Confidence               799999999998876643211 0000           000000 11111 11333   5777888999999999999


Q ss_pred             ceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCC------------CCCeeEEECCCCCCCccceeecCCc--
Q psy7108         186 ILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETH------------EGGNVVLKLPGVKKGDMAARVLKPE--  251 (703)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~------------~~~~~~i~iwd~~~~~~~~~~~~h~--  251 (703)
                      +.+-.......           .++.+|  ..+++......            ......+.-.|..+|+.+-+.....  
T Consensus       322 ~~~W~~~~~~~-----------~~~~~~--~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~~~W~~~~~~~~  388 (488)
T cd00216         322 KLISARPEVEQ-----------PMAYDP--GLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTGKVVWEKREGTIR  388 (488)
T ss_pred             cEeeEeEeecc-----------ccccCC--ceEEEccccccccCcccccCCCCCCCceEEEEEeCCCCcEeeEeeCCccc
Confidence            98876543210           112222  12222110000            0001245555666665544333210  


Q ss_pred             ------cce--EEEEEcCCCCEEEEEeCCC-EEEEEcCCCceeccee
Q psy7108         252 ------VRV--FCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPFL  289 (703)
Q Consensus       252 ------~~V--~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~~  289 (703)
                            ...  ..+.  -.+..++.++.|| ++.+|.++|+.+-...
T Consensus       389 ~~~~~g~~~~~~~~~--~~g~~v~~g~~dG~l~ald~~tG~~lW~~~  433 (488)
T cd00216         389 DSWNIGFPHWGGSLA--TAGNLVFAGAADGYFRAFDATTGKELWKFR  433 (488)
T ss_pred             cccccCCcccCcceE--ecCCeEEEECCCCeEEEEECCCCceeeEEE
Confidence                  111  1122  2456788888899 9999999998865544

The alignment model contains an 8-bladed beta-propeller.

>KOG2281|consensus

Probab=95.60  E-value=0.0066  Score=66.07  Aligned_cols=93  Identities=15%  Similarity=0.069  Sum_probs=59.3

Q ss_pred             CCchhhHHHhHccCC---CcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhhhcccccchhhhcccccceeeee
Q psy7108         529 YDTTATIDYILNQTG---HNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLGNLVTKDMLEGLYGIYALNI  605 (703)
Q Consensus       529 ~d~~~~~~~i~~~~~---~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~s~  605 (703)
                      .|=-.+..|+...+|   -+++++-|+|+|||+.++++...|+.   ++..++-||++.|..-.+ -+.|   +|-+.+-
T Consensus       708 eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~I---frvAIAGapVT~W~~YDT-gYTE---RYMg~P~  780 (867)
T KOG2281|consen  708 EDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNI---FRVAIAGAPVTDWRLYDT-GYTE---RYMGYPD  780 (867)
T ss_pred             hhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcce---eeEEeccCcceeeeeecc-cchh---hhcCCCc
Confidence            344456678887775   37999999999999999999876653   678889999876653322 1222   2222221


Q ss_pred             eeeeecchHHHHHHHHhhCCCCc
Q psy7108         606 FQVGLYDTTATIDYILNQTGHNS  628 (703)
Q Consensus       606 ~e~~~~d~pa~i~~i~~~t~~~~  628 (703)
                      .+=..|-.-....+|-+-+..++
T Consensus       781 ~nE~gY~agSV~~~Veklpdepn  803 (867)
T KOG2281|consen  781 NNEHGYGAGSVAGHVEKLPDEPN  803 (867)
T ss_pred             cchhcccchhHHHHHhhCCCCCc
Confidence            12223555556666666666555

>COG4757 Predicted alpha/beta hydrolase [General function prediction only]

Probab=95.52  E-value=0.016  Score=55.65  Aligned_cols=40  Identities=20%  Similarity=0.235  Sum_probs=33.6

Q ss_pred             CchhhhhcccCCchhhHHHhHccCCCcceEEEEEecCcee
Q psy7108         519 KSTRMNELGLYDTTATIDYILNQTGHNSLITLGHSLGTTN  558 (703)
Q Consensus       519 ~~~~~~~~g~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~  558 (703)
                      ++..|++-+..|++++++++......-.++.+|||+||-.
T Consensus        79 ~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa  118 (281)
T COG4757          79 SQWRYLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQA  118 (281)
T ss_pred             CccchhhhhhcchHHHHHHHHhhCCCCceEEeecccccee
Confidence            4455678999999999999998666678999999999954

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=95.51  E-value=1.5  Score=44.67  Aligned_cols=157  Identities=20%  Similarity=0.234  Sum_probs=86.5

Q ss_pred             CCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEec-cccCCCC
Q psy7108          60 SSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEA-RRDLDSG  138 (703)
Q Consensus        60 dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~-~~~~~~~  138 (703)
                      .++.|+.|..+| +.++++.......... ....|..+...|+-+.+++-+ |+.+.++++..-........ ...  . 
T Consensus         6 ~~~~L~vGt~~G-l~~~~~~~~~~~~~i~-~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~--~-   79 (275)
T PF00780_consen    6 WGDRLLVGTEDG-LYVYDLSDPSKPTRIL-KLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFP--K-   79 (275)
T ss_pred             CCCEEEEEECCC-EEEEEecCCccceeEe-ecceEEEEEEecccCEEEEEc-CCccEEEEchhhcccccccccccc--c-
Confidence            678999999988 8888883332333332 333499999999887776664 69999999976544331110 000  0 


Q ss_pred             CCCCccchhhcccCCccEEEEE--EcCCCCEEEEEecCCcEEEEECCCC-----ceEEEEEeccCCccccccccceeeee
Q psy7108         139 RLDTDLVTREQSLKAKAVSTVC--YSADGSCILAAGQSKYICIYSSREG-----ILLKKFTITQNKSLDGINDFINRRKM  211 (703)
Q Consensus       139 ~~~~~~~~~~~~~~~~~V~~i~--~spdg~~l~s~s~dg~I~lwD~~~~-----~~~~~~~~~~~~~~~~~~~~v~~~~~  211 (703)
                          ...........+.+...+  -...+...++....+.|.+|.....     +..+.+..+         +.+..++|
T Consensus        80 ----~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~lp---------~~~~~i~~  146 (275)
T PF00780_consen   80 ----SRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEISLP---------DPPSSIAF  146 (275)
T ss_pred             ----cccccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEEcC---------CCcEEEEE
Confidence                000000001112344444  1123333333444458888877653     344554432         35677777


Q ss_pred             ccCCCEEEEEcccCCCCCeeEEECCCCCCCccc
Q psy7108         212 TEFGNVSLIETRETHEGGNVVLKLPGVKKGDMA  244 (703)
Q Consensus       212 spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~  244 (703)
                      .  ++.++++...       ...+.|+.++...
T Consensus       147 ~--~~~i~v~~~~-------~f~~idl~~~~~~  170 (275)
T PF00780_consen  147 L--GNKICVGTSK-------GFYLIDLNTGSPS  170 (275)
T ss_pred             e--CCEEEEEeCC-------ceEEEecCCCCce
Confidence            7  5566666544       3556666655443

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=95.45  E-value=0.55  Score=48.58  Aligned_cols=140  Identities=14%  Similarity=0.272  Sum_probs=94.1

Q ss_pred             CeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe----------cCCcEEEEEC
Q psy7108         113 GQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG----------QSKYICIYSS  182 (703)
Q Consensus       113 g~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s----------~dg~I~lwD~  182 (703)
                      ++++++|.++++.+..+....                      .-.+..+||++.+.+++          +...|.+||.
T Consensus        17 ~rv~viD~d~~k~lGmi~~g~----------------------~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~   74 (342)
T PF06433_consen   17 SRVYVIDADSGKLLGMIDTGF----------------------LGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDT   74 (342)
T ss_dssp             EEEEEEETTTTEEEEEEEEES----------------------SEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEET
T ss_pred             ceEEEEECCCCcEEEEeeccc----------------------CCceeECCCCCEEEEEEEEEeccccccceeEEEEEec
Confidence            479999999999988887653                      34577899999988643          3456999999


Q ss_pred             CCCceEEEEEeccC-CccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcC
Q psy7108         183 REGILLKKFTITQN-KSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSP  261 (703)
Q Consensus       183 ~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~sp  261 (703)
                      .+-.....+..+.. +....  ......++|.||+++++..-.- .   .+|.+-|+..++.+..+..+.  +..+  -|
T Consensus        75 ~TL~~~~EI~iP~k~R~~~~--~~~~~~~ls~dgk~~~V~N~TP-a---~SVtVVDl~~~kvv~ei~~PG--C~~i--yP  144 (342)
T PF06433_consen   75 QTLSPTGEIEIPPKPRAQVV--PYKNMFALSADGKFLYVQNFTP-A---TSVTVVDLAAKKVVGEIDTPG--CWLI--YP  144 (342)
T ss_dssp             TTTEEEEEEEETTS-B--BS----GGGEEE-TTSSEEEEEEESS-S---EEEEEEETTTTEEEEEEEGTS--EEEE--EE
T ss_pred             CcCcccceEecCCcchheec--ccccceEEccCCcEEEEEccCC-C---CeEEEEECCCCceeeeecCCC--EEEE--Ee
Confidence            99999888887764 22221  2455678999999888755321 1   378899998888776665433  2222  23


Q ss_pred             CC-CEEEEEeCCC-EEEEEcC-CCce
Q psy7108         262 TG-QAWVAATTEG-VHIYSLD-SGYV  284 (703)
Q Consensus       262 dg-~~l~s~s~Dg-v~iwd~~-~~~~  284 (703)
                      .+ +.+.+-|.|| +.-..++ .|+.
T Consensus       145 ~~~~~F~~lC~DGsl~~v~Ld~~Gk~  170 (342)
T PF06433_consen  145 SGNRGFSMLCGDGSLLTVTLDADGKE  170 (342)
T ss_dssp             EETTEEEEEETTSCEEEEEETSTSSE
T ss_pred             cCCCceEEEecCCceEEEEECCCCCE
Confidence            22 4577888888 7777776 4444

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=95.44  E-value=5.7  Score=46.65  Aligned_cols=221  Identities=14%  Similarity=0.129  Sum_probs=120.1

Q ss_pred             CCCEEEEEeCCCcEEEEEcCCCceeEEEecCCC--------cEEEEEEec----------------CCCEEEEEECCCeE
Q psy7108          60 SSTGMVSASWDKTVKLWNAVETDTQHETIQLLS--------DALCVAYKP----------------DGTEIVVATLDGQL  115 (703)
Q Consensus        60 dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~--------~V~~v~~sp----------------dg~~las~s~dg~I  115 (703)
                      .+..|+.++.++.|.-.|..+++...+......        ....+++..                .+..++.++.|+.+
T Consensus       193 vgg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~L  272 (764)
T TIGR03074       193 VGDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARL  272 (764)
T ss_pred             ECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeE
Confidence            356788888888998889888876554432111        012233321                34478888899999


Q ss_pred             EEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC--CCCEEEEEec----------CCcEEEEECC
Q psy7108         116 IMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA--DGSCILAAGQ----------SKYICIYSSR  183 (703)
Q Consensus       116 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp--dg~~l~s~s~----------dg~I~lwD~~  183 (703)
                      .-.|.++|+....+.....+.-...-.+.       .. .-..+.-.|  .+..+++|+.          +|.|+-+|.+
T Consensus       273 iALDA~TGk~~W~fg~~G~vdl~~~~g~~-------~~-g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~  344 (764)
T TIGR03074       273 IALDADTGKLCEDFGNNGTVDLTAGMGTT-------PP-GYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVN  344 (764)
T ss_pred             EEEECCCCCEEEEecCCCceeeecccCcC-------CC-cccccccCCEEECCEEEEEecccccccccCCCcEEEEEECC
Confidence            99999999988776432211000000000       00 000111112  1334555532          5889999999


Q ss_pred             CCceEEEEEeccC--C--cccc------ccccceeeeeccCCCEEEEEcccCC------------CCCeeEEECCCCCCC
Q psy7108         184 EGILLKKFTITQN--K--SLDG------INDFINRRKMTEFGNVSLIETRETH------------EGGNVVLKLPGVKKG  241 (703)
Q Consensus       184 ~~~~~~~~~~~~~--~--~~~~------~~~~v~~~~~spdg~~l~~~~~~~~------------~~~~~~i~iwd~~~~  241 (703)
                      +|+.+-.+.....  .  ...+      ....-...++.+....+++...+..            +.-..+|.-.|.++|
T Consensus       345 TGkl~W~~~~g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd~~g~~r~~~~n~y~~slvALD~~TG  424 (764)
T TIGR03074       345 TGALVWAWDPGNPDPTAPPAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPDQWGGDRTPADEKYSSSLVALDATTG  424 (764)
T ss_pred             CCcEeeEEecCCCCcccCCCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccccccCCccccCcccccceEEEEeCCCC
Confidence            9999877763210  0  0000      0001123455666555555443211            011235555688888


Q ss_pred             ccceeecCCccceE---------EEEEcC-CCC---EEEEEeCCC-EEEEEcCCCceecce
Q psy7108         242 DMAARVLKPEVRVF---------CVKFSP-TGQ---AWVAATTEG-VHIYSLDSGYVFDPF  288 (703)
Q Consensus       242 ~~~~~~~~h~~~V~---------~l~~sp-dg~---~l~s~s~Dg-v~iwd~~~~~~~~~~  288 (703)
                      +..-.+......++         -+.+.. +|+   .++.++.+| +.+.|.++|+.+-..
T Consensus       425 k~~W~~Q~~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~~~  485 (764)
T TIGR03074       425 KERWVFQTVHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPIVPV  485 (764)
T ss_pred             ceEEEecccCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEEeec
Confidence            77655543111111         122322 553   678889999 999999999876544

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=95.39  E-value=1.1  Score=45.17  Aligned_cols=149  Identities=14%  Similarity=0.113  Sum_probs=87.5

Q ss_pred             cEEEEEEecCCCEEEEEE---CCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEE
Q psy7108          93 DALCVAYKPDGTEIVVAT---LDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCIL  169 (703)
Q Consensus        93 ~V~~v~~spdg~~las~s---~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~  169 (703)
                      .+.+.++++|++.+|...   ....+.++....... ..+.+                      ..+...+|++++...+
T Consensus        25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~~-~~~~g----------------------~~l~~PS~d~~g~~W~   81 (253)
T PF10647_consen   25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGPVR-PVLTG----------------------GSLTRPSWDPDGWVWT   81 (253)
T ss_pred             cccceEECCCCCeEEEEEEcCCCCEEEEEcCCCcce-eeccC----------------------CccccccccCCCCEEE
Confidence            688999999999887766   234566665432221 11222                      1577889999987777


Q ss_pred             EEecCCcEEEEE-CCCCceEE-EEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC---CC---
Q psy7108         170 AAGQSKYICIYS-SREGILLK-KFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK---KG---  241 (703)
Q Consensus       170 s~s~dg~I~lwD-~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~---~~---  241 (703)
                      +...+....++. ..++.... ......      ....|..+.+||||..+++....+..   ..+.+=-+.   .+   
T Consensus        82 v~~~~~~~~~~~~~~~g~~~~~~v~~~~------~~~~I~~l~vSpDG~RvA~v~~~~~~---~~v~va~V~r~~~g~~~  152 (253)
T PF10647_consen   82 VDDGSGGVRVVRDSASGTGEPVEVDWPG------LRGRITALRVSPDGTRVAVVVEDGGG---GRVYVAGVVRDGDGVPR  152 (253)
T ss_pred             EEcCCCceEEEEecCCCcceeEEecccc------cCCceEEEEECCCCcEEEEEEecCCC---CeEEEEEEEeCCCCCcc
Confidence            766666666663 33333221 111111      11178999999999998887754322   234333221   12   


Q ss_pred             ---ccceeecCCccceEEEEEcCCCCEEEEEeCCC
Q psy7108         242 ---DMAARVLKPEVRVFCVKFSPTGQAWVAATTEG  273 (703)
Q Consensus       242 ---~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg  273 (703)
                         ............+.+++|.+++..++.+...+
T Consensus       153 ~l~~~~~~~~~~~~~v~~v~W~~~~~L~V~~~~~~  187 (253)
T PF10647_consen  153 RLTGPRRVAPPLLSDVTDVAWSDDSTLVVLGRSAG  187 (253)
T ss_pred             eeccceEecccccCcceeeeecCCCEEEEEeCCCC
Confidence               11112223346789999999998876665544

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>KOG2079|consensus

Probab=95.38  E-value=0.061  Score=62.12  Aligned_cols=100  Identities=16%  Similarity=0.188  Sum_probs=71.3

Q ss_pred             CCCEEEEEeCCCcEEEEEcCCCce-eEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCC
Q psy7108          60 SSTGMVSASWDKTVKLWNAVETDT-QHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSG  138 (703)
Q Consensus        60 dg~~L~sgs~Dg~V~iWd~~~~~~-~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~  138 (703)
                      -+..++.|+..|.+-..|+...-. ..+-....++|++++|+.+|+.++.|-.+|.|.+||+..++.++.+..+...   
T Consensus        98 ~~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap---  174 (1206)
T KOG2079|consen   98 VVVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAP---  174 (1206)
T ss_pred             eeeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCc---
Confidence            456788888889888888754311 1222235678999999999999999999999999999999998888776541   


Q ss_pred             CCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCc
Q psy7108         139 RLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKY  176 (703)
Q Consensus       139 ~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~  176 (703)
                                    ...|-.+.+..++..++++...|.
T Consensus       175 --------------~t~vi~v~~t~~nS~llt~D~~Gs  198 (1206)
T KOG2079|consen  175 --------------VTGVIFVGRTSQNSKLLTSDTGGS  198 (1206)
T ss_pred             --------------cceEEEEEEeCCCcEEEEccCCCc
Confidence                          113444445555555666655554

>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II

Probab=95.29  E-value=0.011  Score=65.26  Aligned_cols=139  Identities=13%  Similarity=0.005  Sum_probs=86.0

Q ss_pred             cCchhhhhcccCCchhhHHHhHcc-CCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhhhcccccchhhhcc
Q psy7108         518 LKSTRMNELGLYDTTATIDYILNQ-TGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLGNLVTKDMLEG  596 (703)
Q Consensus       518 ~~~~~~~~~g~~d~~~~~~~i~~~-~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  596 (703)
                      .+.|+++-..+..=    -||+.. ++++.+-++-  ..|++||+.--++|...+                         
T Consensus       214 ~~~PLLIVPp~INK----~YIlDL~P~~SlVr~lv--~qG~~VflIsW~nP~~~~-------------------------  262 (560)
T TIGR01839       214 HARPLLVVPPQINK----FYIFDLSPEKSFVQYCL--KNQLQVFIISWRNPDKAH-------------------------  262 (560)
T ss_pred             CCCcEEEechhhhh----hheeecCCcchHHHHHH--HcCCeEEEEeCCCCChhh-------------------------
Confidence            44555555554311    344432 2455565665  677778885555554322                         


Q ss_pred             cccceeeeeeeeeecchHHHHHHHHhhCCCCceEEEEeChhHHHHHH----HhcCCchHHHHHHHheecccccccCCCCC
Q psy7108         597 LYGIYALNIFQVGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLI----AGSLRPEYQTKVRLNVLWAQSAFLGNLVT  672 (703)
Q Consensus       597 ~~~~~~~s~~e~~~~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~----~~s~~~~~~~~i~~~~~l~p~~~~~~~~~  672 (703)
                          ..+.+++... .+++.++.|...||.++++++||++||++..+    +.+.+++  ++|+.++.++....+.. .+
T Consensus       263 ----r~~~ldDYv~-~i~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~--~~V~sltllatplDf~~-~g  334 (560)
T TIGR01839       263 ----REWGLSTYVD-ALKEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQL--RKVNSLTYLVSLLDSTM-ES  334 (560)
T ss_pred             ----cCCCHHHHHH-HHHHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCC--CceeeEEeeecccccCC-CC
Confidence                2355677775 89999999999999999999999999999887    4555442  26888887775444432 12


Q ss_pred             h-------hhHHHHHHhhccccccchhHhh
Q psy7108         673 R-------DMLEGLYGIYAEYQTISGYFIK  695 (703)
Q Consensus       673 ~-------~~~~~~~~~~~~~~~~~~~~~~  695 (703)
                      .       ..+..+-..+....++|...+.
T Consensus       335 ~l~~f~~e~~~~~~e~~~~~~G~lpg~~ma  364 (560)
T TIGR01839       335 PAALFADEQTLEAAKRRSYQAGVLDGSEMA  364 (560)
T ss_pred             cchhccChHHHHHHHHHHHhcCCcCHHHHH
Confidence            1       1122222344456677777443

This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=95.26  E-value=3.8  Score=41.33  Aligned_cols=154  Identities=12%  Similarity=0.113  Sum_probs=91.1

Q ss_pred             CeEEEEEcCCCCCCEEEEEe-CCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEE-cCCCcEE
Q psy7108          49 PVSCIEFSPVLSSTGMVSAS-WDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFD-VESAAQV  126 (703)
Q Consensus        49 ~V~~l~~sp~~dg~~L~sgs-~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd-~~~~~~~  126 (703)
                      .+.+.++++  +++.++... .++.-.+|-...+....... ....+..-.|++++...+....+....++. ..+++..
T Consensus        25 ~~~s~AvS~--dg~~~A~v~~~~~~~~L~~~~~~~~~~~~~-~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~  101 (253)
T PF10647_consen   25 DVTSPAVSP--DGSRVAAVSEGDGGRSLYVGPAGGPVRPVL-TGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGE  101 (253)
T ss_pred             cccceEECC--CCCeEEEEEEcCCCCEEEEEcCCCcceeec-cCCccccccccCCCCEEEEEcCCCceEEEEecCCCcce
Confidence            688999999  999887665 23334444444443333333 334788889999988777766666666663 2333222


Q ss_pred             E-EEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe---cCCcEEEEECCC---CceEEEEEeccCCcc
Q psy7108         127 G-SVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG---QSKYICIYSSRE---GILLKKFTITQNKSL  199 (703)
Q Consensus       127 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s---~dg~I~lwD~~~---~~~~~~~~~~~~~~~  199 (703)
                      . ......                  ..+.|..+.+||||..++...   .++.|.+--+..   +.. ..+.... ...
T Consensus       102 ~~~v~~~~------------------~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~-~~l~~~~-~~~  161 (253)
T PF10647_consen  102 PVEVDWPG------------------LRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVP-RRLTGPR-RVA  161 (253)
T ss_pred             eEEecccc------------------cCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCc-ceeccce-Eec
Confidence            1 111111                  011699999999999988754   346677665432   211 1111110 111


Q ss_pred             ccccccceeeeeccCCCEEEEEcccC
Q psy7108         200 DGINDFINRRKMTEFGNVSLIETRET  225 (703)
Q Consensus       200 ~~~~~~v~~~~~spdg~~l~~~~~~~  225 (703)
                      ......+..+.|.+++..++.+...+
T Consensus       162 ~~~~~~v~~v~W~~~~~L~V~~~~~~  187 (253)
T PF10647_consen  162 PPLLSDVTDVAWSDDSTLVVLGRSAG  187 (253)
T ss_pred             ccccCcceeeeecCCCEEEEEeCCCC
Confidence            12234788999999999888776654

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=95.25  E-value=1.4  Score=46.60  Aligned_cols=217  Identities=13%  Similarity=0.103  Sum_probs=104.2

Q ss_pred             cCCCccccccccCCCcCeEE-----EEEcCCCCCCEEEEEe-CCCc--EEEEEcCCCceeEEEecCCC-cEEEEEEecCC
Q psy7108          33 MAARVLKPEVLSGHEGPVSC-----IEFSPVLSSTGMVSAS-WDKT--VKLWNAVETDTQHETIQLLS-DALCVAYKPDG  103 (703)
Q Consensus        33 ~tg~~~~~~~l~gH~~~V~~-----l~~sp~~dg~~L~sgs-~Dg~--V~iWd~~~~~~~~~~~~~~~-~V~~v~~spdg  103 (703)
                      .||..+  .+|+.+...-..     =+|.+  ||+.|+.+| .||.  +.+-|+.++ ...++....+ ......++|++
T Consensus        18 ~TG~~V--trLT~~~~~~h~~YF~~~~ft~--dG~kllF~s~~dg~~nly~lDL~t~-~i~QLTdg~g~~~~g~~~s~~~   92 (386)
T PF14583_consen   18 DTGHRV--TRLTPPDGHSHRLYFYQNCFTD--DGRKLLFASDFDGNRNLYLLDLATG-EITQLTDGPGDNTFGGFLSPDD   92 (386)
T ss_dssp             TT--EE--EE-S-TTS-EE---TTS--B-T--TS-EEEEEE-TTSS-EEEEEETTT--EEEE---SS-B-TTT-EE-TTS
T ss_pred             CCCceE--EEecCCCCcccceeecCCCcCC--CCCEEEEEeccCCCcceEEEEcccC-EEEECccCCCCCccceEEecCC
Confidence            466655  556544332222     24667  887766654 4655  455577676 4555554432 23356778999


Q ss_pred             CEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEE--cCCCCEEEEEe---------
Q psy7108         104 TEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCY--SADGSCILAAG---------  172 (703)
Q Consensus       104 ~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~--spdg~~l~s~s---------  172 (703)
                      +.++....+..|+-.|+++.+....+.....                    .+-...|  +.|+..++..-         
T Consensus        93 ~~~~Yv~~~~~l~~vdL~T~e~~~vy~~p~~--------------------~~g~gt~v~n~d~t~~~g~e~~~~d~~~l  152 (386)
T PF14583_consen   93 RALYYVKNGRSLRRVDLDTLEERVVYEVPDD--------------------WKGYGTWVANSDCTKLVGIEISREDWKPL  152 (386)
T ss_dssp             SEEEEEETTTEEEEEETTT--EEEEEE--TT--------------------EEEEEEEEE-TTSSEEEEEEEEGGG----
T ss_pred             CeEEEEECCCeEEEEECCcCcEEEEEECCcc--------------------cccccceeeCCCccEEEEEEEeehhccCc
Confidence            9988777778999999999987766666544                    3333444  34565544321         


Q ss_pred             -------------cCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC
Q psy7108         173 -------------QSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK  239 (703)
Q Consensus       173 -------------~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~  239 (703)
                                   ....|.-.|+.+|+....+..         ..++..+.|||....++.=|..|.-.. ..-+||-++
T Consensus       153 ~~~~~f~e~~~a~p~~~i~~idl~tG~~~~v~~~---------~~wlgH~~fsP~dp~li~fCHEGpw~~-Vd~RiW~i~  222 (386)
T PF14583_consen  153 TKWKGFREFYEARPHCRIFTIDLKTGERKVVFED---------TDWLGHVQFSPTDPTLIMFCHEGPWDL-VDQRIWTIN  222 (386)
T ss_dssp             -SHHHHHHHHHC---EEEEEEETTT--EEEEEEE---------SS-EEEEEEETTEEEEEEEEE-S-TTT-SS-SEEEEE
T ss_pred             cccHHHHHHHhhCCCceEEEEECCCCceeEEEec---------CccccCcccCCCCCCEEEEeccCCcce-eceEEEEEE
Confidence                         113466678888776555542         237788999998777666555443221 112556333


Q ss_pred             C-CccceeecCC--ccceEEEEEcCCCCEEEEEe--CCC----EEEEEcCCCce
Q psy7108         240 K-GDMAARVLKP--EVRVFCVKFSPTGQAWVAAT--TEG----VHIYSLDSGYV  284 (703)
Q Consensus       240 ~-~~~~~~~~~h--~~~V~~l~~spdg~~l~s~s--~Dg----v~iwd~~~~~~  284 (703)
                      + +.....+..+  ...+..=-|.|||..+.--+  ..+    |.-++..+++.
T Consensus       223 ~dg~~~~~v~~~~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~~~  276 (386)
T PF14583_consen  223 TDGSNVKKVHRRMEGESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDTGER  276 (386)
T ss_dssp             TTS---EESS---TTEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT--E
T ss_pred             cCCCcceeeecCCCCcccccccccCCCCEEEEEeecCCCCceEEEeeCCCCCCc
Confidence            2 2222222222  33455567899998874322  222    55667777654

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.24  E-value=0.47  Score=47.17  Aligned_cols=207  Identities=15%  Similarity=0.159  Sum_probs=110.3

Q ss_pred             EEcCCCCCCEEEEEeCC-----CcEEEEEcCCCc-eeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEE--------E
Q psy7108          54 EFSPVLSSTGMVSASWD-----KTVKLWNAVETD-TQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMF--------D  119 (703)
Q Consensus        54 ~~sp~~dg~~L~sgs~D-----g~V~iWd~~~~~-~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vw--------d  119 (703)
                      .|||  ||.+|+..-.|     |.|-|||...+- .+.++..|.-....+.|.+||+.++.+.  |-|..-        +
T Consensus       120 vfs~--dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvan--GGIethpdfgR~~lN  195 (366)
T COG3490         120 VFSP--DGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVAN--GGIETHPDFGRTELN  195 (366)
T ss_pred             ccCC--CCcEEEeecCCCCCCCceEEEEecccccceecccccCCcCcceeEEecCCcEEEEeC--CceecccccCccccc
Confidence            5899  99999876433     678899987442 3344555777778899999999998874  333322        2


Q ss_pred             cCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCC-----cEEEEECCCCceEEEEEec
Q psy7108         120 VESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSK-----YICIYSSREGILLKKFTIT  194 (703)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg-----~I~lwD~~~~~~~~~~~~~  194 (703)
                      +++.++...+-....   + .--.+...+...+.-.+..++..+||..++.+-..|     ---+=-...++.+.-+..+
T Consensus       196 ldsMePSlvlld~at---G-~liekh~Lp~~l~~lSiRHld~g~dgtvwfgcQy~G~~~d~ppLvg~~~~g~~l~~~~~p  271 (366)
T COG3490         196 LDSMEPSLVLLDAAT---G-NLIEKHTLPASLRQLSIRHLDIGRDGTVWFGCQYRGPRNDLPPLVGHFRKGEPLEFLDLP  271 (366)
T ss_pred             hhhcCccEEEEeccc---c-chhhhccCchhhhhcceeeeeeCCCCcEEEEEEeeCCCccCCcceeeccCCCcCcccCCC
Confidence            222222111111000   0 000000111112334678888888887665542211     1111111223333333222


Q ss_pred             cCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-
Q psy7108         195 QNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-  273 (703)
Q Consensus       195 ~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-  273 (703)
                      .. .......+|-+++.+.+...+..++-.|     +...+||..+|..+....-.+  +..++  +...-++..+.+| 
T Consensus       272 ee-~~~~~anYigsiA~n~~~glV~lTSP~G-----N~~vi~da~tG~vv~~a~l~d--aaGva--~~~~gf~vssg~G~  341 (366)
T COG3490         272 EE-QTAAFANYIGSIAANRRDGLVALTSPRG-----NRAVIWDAATGAVVSEAALPD--AAGVA--AAKGGFAVSSGQGR  341 (366)
T ss_pred             HH-HHHHHHhhhhheeecccCCeEEEecCCC-----CeEEEEEcCCCcEEecccccc--cccce--eccCceEEecCCce
Confidence            11 1122334778888888777777777654     478899999997654332211  22222  3344466666666 


Q ss_pred             EEEEE
Q psy7108         274 VHIYS  278 (703)
Q Consensus       274 v~iwd  278 (703)
                      +..++
T Consensus       342 ~~~~s  346 (366)
T COG3490         342 IIFYS  346 (366)
T ss_pred             EEecc
Confidence            76664

>KOG3621|consensus

Probab=95.20  E-value=0.1  Score=57.73  Aligned_cols=114  Identities=17%  Similarity=0.202  Sum_probs=80.1

Q ss_pred             cEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEE
Q psy7108         155 AVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLK  234 (703)
Q Consensus       155 ~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~  234 (703)
                      .|.--+++..+++++.|+..|.+++|+-..+..... +..      +-...+..+..+++..++++++..+      .|.
T Consensus        35 ~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~-~~~------~~~~~~~~~~vs~~e~lvAagt~~g------~V~  101 (726)
T KOG3621|consen   35 RVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKL-KNE------GATGITCVRSVSSVEYLVAAGTASG------RVS  101 (726)
T ss_pred             eEEEEEeecCCceEEEecccceEEEEecCchhhhcc-ccc------CccceEEEEEecchhHhhhhhcCCc------eEE
Confidence            455566777899999999999999999766644322 111      1112555677888888877777654      677


Q ss_pred             CCCCCCCccc---ee---ecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCC
Q psy7108         235 LPGVKKGDMA---AR---VLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDS  281 (703)
Q Consensus       235 iwd~~~~~~~---~~---~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~  281 (703)
                      ++-+..+.+.   ..   ...|...|++++|++|+..+.+|...| |..-.+++
T Consensus       102 v~ql~~~~p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s  155 (726)
T KOG3621|consen  102 VFQLNKELPRDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS  155 (726)
T ss_pred             eehhhccCCCcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence            7765543221   11   123678899999999999999999999 77777765

>KOG2395|consensus

Probab=95.18  E-value=0.23  Score=53.30  Aligned_cols=139  Identities=17%  Similarity=0.213  Sum_probs=88.5

Q ss_pred             CCCEEE-EEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCC--E-----EEEEECCCeEEEEEcCCCc--EEEEE
Q psy7108          60 SSTGMV-SASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGT--E-----IVVATLDGQLIMFDVESAA--QVGSV  129 (703)
Q Consensus        60 dg~~L~-sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~--~-----las~s~dg~I~vwd~~~~~--~~~~~  129 (703)
                      +.++|+ ++..-..++--|++.|+.+ ........|.-+.+.|+.+  .     =+.|-.|..|.-||.+-..  .+...
T Consensus       344 dsnlil~~~~~~~~l~klDIE~GKIV-eEWk~~~di~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~  422 (644)
T KOG2395|consen  344 DSNLILMDGGEQDKLYKLDIERGKIV-EEWKFEDDINMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVV  422 (644)
T ss_pred             ccceEeeCCCCcCcceeeecccceee-eEeeccCCcceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeee
Confidence            344444 3444456777788888544 4444444577788888754  2     2456678899999987322  22222


Q ss_pred             eccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceee
Q psy7108         130 EARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRR  209 (703)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~  209 (703)
                      +++. +.               ......|.+-..+| +|++||.+|.|++||- .+..-++       .+.+...+|..+
T Consensus       423 q~kq-y~---------------~k~nFsc~aTT~sG-~IvvgS~~GdIRLYdr-i~~~AKT-------AlPgLG~~I~hV  477 (644)
T KOG2395|consen  423 QSKQ-YS---------------TKNNFSCFATTESG-YIVVGSLKGDIRLYDR-IGRRAKT-------ALPGLGDAIKHV  477 (644)
T ss_pred             eccc-cc---------------cccccceeeecCCc-eEEEeecCCcEEeehh-hhhhhhh-------cccccCCceeeE
Confidence            2221 11               12246677766666 7999999999999995 4433222       245566799999


Q ss_pred             eeccCCCEEEEEccc
Q psy7108         210 KMTEFGNVSLIETRE  224 (703)
Q Consensus       210 ~~spdg~~l~~~~~~  224 (703)
                      ..+.+|++++.++..
T Consensus       478 dvtadGKwil~Tc~t  492 (644)
T KOG2395|consen  478 DVTADGKWILATCKT  492 (644)
T ss_pred             EeeccCcEEEEeccc
Confidence            999999998887754

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=95.15  E-value=4.4  Score=45.70  Aligned_cols=205  Identities=13%  Similarity=0.129  Sum_probs=116.6

Q ss_pred             CCEEEEEeCCCcEEEEEcCCCceeEEEecC-CCcEE----------EEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEE
Q psy7108          61 STGMVSASWDKTVKLWNAVETDTQHETIQL-LSDAL----------CVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSV  129 (703)
Q Consensus        61 g~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~-~~~V~----------~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~  129 (703)
                      +..++.++.++.|.-.|..+++...+.... ...+.          .+++.  +..++.++.|+.+.-.|.++|+.+-..
T Consensus        69 ~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av~--~~~v~v~t~dg~l~ALDa~TGk~~W~~  146 (527)
T TIGR03075        69 DGVMYVTTSYSRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVALY--DGKVFFGTLDARLVALDAKTGKVVWSK  146 (527)
T ss_pred             CCEEEEECCCCcEEEEECCCCceeeEecCCCCcccccccccccccccceEE--CCEEEEEcCCCEEEEEECCCCCEEeec
Confidence            457777777888999999888765544321 11111          12222  346777888999999999999987665


Q ss_pred             eccccCCCCCCCCccchhhcccCCccEEE-EEEcCCCCEEEEEe------cCCcEEEEECCCCceEEEEEeccCCc----
Q psy7108         130 EARRDLDSGRLDTDLVTREQSLKAKAVST-VCYSADGSCILAAG------QSKYICIYSSREGILLKKFTITQNKS----  198 (703)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~V~~-i~~spdg~~l~s~s------~dg~I~lwD~~~~~~~~~~~~~~~~~----  198 (703)
                      ..... ..               ...+++ .... ++ .+++++      .+|.|..+|.++|+.+-++..-....    
T Consensus       147 ~~~~~-~~---------------~~~~tssP~v~-~g-~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~~p~~~~~~~  208 (527)
T TIGR03075       147 KNGDY-KA---------------GYTITAAPLVV-KG-KVITGISGGEFGVRGYVTAYDAKTGKLVWRRYTVPGDMGYLD  208 (527)
T ss_pred             ccccc-cc---------------cccccCCcEEE-CC-EEEEeecccccCCCcEEEEEECCCCceeEeccCcCCCccccc
Confidence            43210 00               001111 1111 34 344443      26889999999998876654322110    


Q ss_pred             --------cc------------cccccceeeeeccCCCEEEEEccc------CCCCCe----eEEECCCCCCCccceeec
Q psy7108         199 --------LD------------GINDFINRRKMTEFGNVSLIETRE------THEGGN----VVLKLPGVKKGDMAARVL  248 (703)
Q Consensus       199 --------~~------------~~~~~v~~~~~spdg~~l~~~~~~------~~~~~~----~~i~iwd~~~~~~~~~~~  248 (703)
                              ..            +-...-...++.|....++++.++      ....++    .+|.-.|+++|+..-.++
T Consensus       209 ~~~~~~~~~~~~~tw~~~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~TG~~~W~~Q  288 (527)
T TIGR03075       209 KADKPVGGEPGAKTWPGDAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPDTGKIKWHYQ  288 (527)
T ss_pred             ccccccccccccCCCCCCccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEccccCCEEEeee
Confidence                    00            000111234667777777776643      111111    256666888988765544


Q ss_pred             C--Ccc-------ceEEEEEcCCCC---EEEEEeCCC-EEEEEcCCCcee
Q psy7108         249 K--PEV-------RVFCVKFSPTGQ---AWVAATTEG-VHIYSLDSGYVF  285 (703)
Q Consensus       249 ~--h~~-------~V~~l~~spdg~---~l~s~s~Dg-v~iwd~~~~~~~  285 (703)
                      .  |+.       ...-+....+|+   .++.++.+| +.+.|..+|+.+
T Consensus       289 ~~~~D~wD~d~~~~p~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i  338 (527)
T TIGR03075       289 TTPHDEWDYDGVNEMILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKLL  338 (527)
T ss_pred             CCCCCCccccCCCCcEEEEeccCCcEEEEEEEeCCCceEEEEECCCCcee
Confidence            3  221       111223334666   667888899 999999999765

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>PHA02713 hypothetical protein; Provisional

Probab=95.05  E-value=0.44  Score=54.17  Aligned_cols=192  Identities=6%  Similarity=0.024  Sum_probs=92.4

Q ss_pred             CCCEEEEEeCC------CcEEEEEcCCCceeEEEecCCCc-EEEEEEecCCCEEEEEECCC-----eEEEEEcCCCcEEE
Q psy7108          60 SSTGMVSASWD------KTVKLWNAVETDTQHETIQLLSD-ALCVAYKPDGTEIVVATLDG-----QLIMFDVESAAQVG  127 (703)
Q Consensus        60 dg~~L~sgs~D------g~V~iWd~~~~~~~~~~~~~~~~-V~~v~~spdg~~las~s~dg-----~I~vwd~~~~~~~~  127 (703)
                      ++..++.||.+      ..+..||..+..- ........+ -......-+|+..+.||.++     ++..||..+.+-..
T Consensus       303 ~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W-~~~~~m~~~R~~~~~~~~~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~  381 (557)
T PHA02713        303 DNEIIIAGGYNFNNPSLNKVYKINIENKIH-VELPPMIKNRCRFSLAVIDDTIYAIGGQNGTNVERTIECYTMGDDKWKM  381 (557)
T ss_pred             CCEEEEEcCCCCCCCccceEEEEECCCCeE-eeCCCCcchhhceeEEEECCEEEEECCcCCCCCCceEEEEECCCCeEEE
Confidence            56777777754      2366778766531 111111111 11122233677778887654     37778877653221


Q ss_pred             EEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC-----------------------CcEEEEECCC
Q psy7108         128 SVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS-----------------------KYICIYSSRE  184 (703)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d-----------------------g~I~lwD~~~  184 (703)
                      . ..-.   .              .......++  -+|+..+.|+.+                       ..+..||.++
T Consensus       382 ~-~~mp---~--------------~r~~~~~~~--~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~~~~~ve~YDP~t  441 (557)
T PHA02713        382 L-PDMP---I--------------ALSSYGMCV--LDQYIYIIGGRTEHIDYTSVHHMNSIDMEEDTHSSNKVIRYDTVN  441 (557)
T ss_pred             C-CCCC---c--------------ccccccEEE--ECCEEEEEeCCCcccccccccccccccccccccccceEEEECCCC
Confidence            0 0000   0              000111222  256666667654                       2477788877


Q ss_pred             CceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCC-C--ccceeecCCccceEEEEEcC
Q psy7108         185 GILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKK-G--DMAARVLKPEVRVFCVKFSP  261 (703)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~-~--~~~~~~~~h~~~V~~l~~sp  261 (703)
                      .+-...-.....        ........-+|+.+++++.++.......+..||..+ .  ..+..+.........+.+  
T Consensus       442 d~W~~v~~m~~~--------r~~~~~~~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~~~~--  511 (557)
T PHA02713        442 NIWETLPNFWTG--------TIRPGVVSHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHTILH--  511 (557)
T ss_pred             CeEeecCCCCcc--------cccCcEEEECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccceeEEE--
Confidence            654321111111        111122334566666666443222223567898876 3  333333333333333333  


Q ss_pred             CCCEEEEEeCCC---EEEEEcCCC
Q psy7108         262 TGQAWVAATTEG---VHIYSLDSG  282 (703)
Q Consensus       262 dg~~l~s~s~Dg---v~iwd~~~~  282 (703)
                      +|+..++|+.++   +..||..+.
T Consensus       512 ~~~iyv~Gg~~~~~~~e~yd~~~~  535 (557)
T PHA02713        512 DNTIMMLHCYESYMLQDTFNVYTY  535 (557)
T ss_pred             CCEEEEEeeecceeehhhcCcccc
Confidence            677778998888   455665543

>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I

Probab=94.99  E-value=0.01  Score=65.99  Aligned_cols=34  Identities=18%  Similarity=0.202  Sum_probs=28.4

Q ss_pred             cccCCchhhHHHhHccCCCcceEEEEEecCceee
Q psy7108         526 LGLYDTTATIDYILNQTGHNSLITLGHSLGTTNV  559 (703)
Q Consensus       526 ~g~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~  559 (703)
                      ....++.+++++|+...+..++.++|||+||+.+
T Consensus       243 Y~~~~i~~al~~v~~~~g~~kv~lvG~cmGGtl~  276 (532)
T TIGR01838       243 YIRDGVIAALEVVEAITGEKQVNCVGYCIGGTLL  276 (532)
T ss_pred             hHHHHHHHHHHHHHHhcCCCCeEEEEECcCcHHH
Confidence            3344577889999988888999999999999865

This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=94.99  E-value=5.9  Score=41.98  Aligned_cols=207  Identities=12%  Similarity=0.074  Sum_probs=100.4

Q ss_pred             eeccCCCccccccccCCCc-CeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEec-CCCcEEEEEEe--cCCCE
Q psy7108          30 KGDMAARVLKPEVLSGHEG-PVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQ-LLSDALCVAYK--PDGTE  105 (703)
Q Consensus        30 ~~d~tg~~~~~~~l~gH~~-~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~-~~~~V~~v~~s--pdg~~  105 (703)
                      ..|.....+  .+|+.+.+ ......++|  +.+.++-...+..|+--|+.+.+.. .+.. ...-+-...|.  .|+..
T Consensus        64 ~lDL~t~~i--~QLTdg~g~~~~g~~~s~--~~~~~~Yv~~~~~l~~vdL~T~e~~-~vy~~p~~~~g~gt~v~n~d~t~  138 (386)
T PF14583_consen   64 LLDLATGEI--TQLTDGPGDNTFGGFLSP--DDRALYYVKNGRSLRRVDLDTLEER-VVYEVPDDWKGYGTWVANSDCTK  138 (386)
T ss_dssp             EEETTT-EE--EE---SS-B-TTT-EE-T--TSSEEEEEETTTEEEEEETTT--EE-EEEE--TTEEEEEEEEE-TTSSE
T ss_pred             EEEcccCEE--EECccCCCCCccceEEec--CCCeEEEEECCCeEEEEECCcCcEE-EEEECCcccccccceeeCCCccE
Confidence            345444445  56765542 233567788  7787776656678888899887543 4444 44444446664  45555


Q ss_pred             EEEEEC----------------------CCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC
Q psy7108         106 IVVATL----------------------DGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA  163 (703)
Q Consensus       106 las~s~----------------------dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp  163 (703)
                      ++-.-.                      ...|.-.|+.+|+....+....                     .+.-+.|+|
T Consensus       139 ~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~~~v~~~~~---------------------wlgH~~fsP  197 (386)
T PF14583_consen  139 LVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGERKVVFEDTD---------------------WLGHVQFSP  197 (386)
T ss_dssp             EEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT--EEEEEEESS----------------------EEEEEEET
T ss_pred             EEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCceeEEEecCc---------------------cccCcccCC
Confidence            543211                      1236667888887766665433                     678899999


Q ss_pred             CCCEE-EEEe---cCC-cEEEEECCC-CceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCC
Q psy7108         164 DGSCI-LAAG---QSK-YICIYSSRE-GILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPG  237 (703)
Q Consensus       164 dg~~l-~s~s---~dg-~I~lwD~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd  237 (703)
                      ..-.+ +-|-   .+. .-+||-+++ +...+.+..+..      ...+..=-|.|||..+....... .+.+..|.-+|
T Consensus       198 ~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~------~e~~gHEfw~~DG~~i~y~~~~~-~~~~~~i~~~d  270 (386)
T PF14583_consen  198 TDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRME------GESVGHEFWVPDGSTIWYDSYTP-GGQDFWIAGYD  270 (386)
T ss_dssp             TEEEEEEEEE-S-TTTSS-SEEEEETTS---EESS---T------TEEEEEEEE-TTSS-EEEEEEET-TT--EEEEEE-
T ss_pred             CCCCEEEEeccCCcceeceEEEEEEcCCCcceeeecCCC------CcccccccccCCCCEEEEEeecC-CCCceEEEeeC
Confidence            55444 4442   222 135555443 333333221111      23556667999999887755422 23345677778


Q ss_pred             CCCCccceeecCCccceEEEEEcCCCCEEEEEeC
Q psy7108         238 VKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATT  271 (703)
Q Consensus       238 ~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~  271 (703)
                      ..+++.......  .....+.-++||++++-=+.
T Consensus       271 ~~t~~~~~~~~~--p~~~H~~ss~Dg~L~vGDG~  302 (386)
T PF14583_consen  271 PDTGERRRLMEM--PWCSHFMSSPDGKLFVGDGG  302 (386)
T ss_dssp             TTT--EEEEEEE---SEEEEEE-TTSSEEEEEE-
T ss_pred             CCCCCceEEEeC--CceeeeEEcCCCCEEEecCC
Confidence            888754332221  13445566889988765443

>KOG1454|consensus

Probab=94.96  E-value=0.067  Score=56.20  Aligned_cols=58  Identities=21%  Similarity=0.196  Sum_probs=41.3

Q ss_pred             HHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccccCCCCCh
Q psy7108         616 TIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLGNLVTR  673 (703)
Q Consensus       616 ~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~~~~~~~  673 (703)
                      ++...+..-+..+++++|||.|+.++|.+++..|+.-+++-.+-.++|..+.......
T Consensus       117 ~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~  174 (326)
T KOG1454|consen  117 LIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIK  174 (326)
T ss_pred             HHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchh
Confidence            4444555556667999999999999999999988754444433377777776554433

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=94.75  E-value=0.11  Score=37.21  Aligned_cols=34  Identities=24%  Similarity=0.466  Sum_probs=30.1

Q ss_pred             CCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCc
Q psy7108          90 LLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAA  124 (703)
Q Consensus        90 ~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~  124 (703)
                      ....|.+++|+|....||.++.+|.|.++.+ +++
T Consensus        10 l~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~q   43 (47)
T PF12894_consen   10 LPSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQ   43 (47)
T ss_pred             CCCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCc
Confidence            4567999999999999999999999999998 444

>PF09384 UTP15_C: UTP15 C terminal; InterPro: IPR018983 This entry represents the C-terminal domain of the U3 small nucleolar RNA-associated protein 15 (UTP15)

Probab=94.70  E-value=0.046  Score=50.09  Aligned_cols=105  Identities=22%  Similarity=0.310  Sum_probs=84.9

Q ss_pred             hhHhhcCCcceEEEEEE-ecCchhHHHHHhhcc-CcchHHHHHhhccHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q psy7108         300 KEALADKDYAKALMMSL-KLNEQGLIIHVLENI-RTRDIALTVRSLAEIYLEKLLKFIAAMLEVSKHIEFYVSWVSQILM  377 (703)
Q Consensus       300 ~~~l~sg~~~~~l~la~-~l~~~~~~~~v~~~~-~~~~i~~~~~~l~~~~~~~ll~~~~~~~~~~~~~e~~~~~l~~~l~  377 (703)
                      ...|....+..++..++ ....|..+..+++++ ..+.+..++.+.+...+.++|+|+..++.++++...+..++..+++
T Consensus        26 D~~Lr~F~y~~ALD~aL~~~~~p~~~vavl~EL~~R~~L~~AL~~Rde~~L~piL~Fl~k~i~~pr~~~~l~~v~~~ild  105 (148)
T PF09384_consen   26 DKLLRKFRYKKALDAALVKNKSPEVVVAVLEELIRRGALRAALAGRDEESLEPILKFLIKNITDPRYTRILVDVANIILD  105 (148)
T ss_pred             HHHHHcCCHHHHHHHHHhcCCChHHHHHHHHHHHHccHHHHHHHhCCHHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHH
Confidence            36777788888877777 667788888888776 5778999999999999999999999999999999999999999999


Q ss_pred             H----cCCCchh--hHHHHHHHHHHHHhhhhce
Q psy7108         378 V----LKSPSQT--TLVHLQRNLNKKYSDLAKI  404 (703)
Q Consensus       378 ~----l~~~~~~--~l~~L~~~l~~~~~~~~~l  404 (703)
                      .    +......  .+..|+..+++.......+
T Consensus       106 iY~~~~~~s~~v~~~~~~L~~~v~~E~~~~~~l  138 (148)
T PF09384_consen  106 IYSPVIGQSPEVDKLFQKLQRKVQEELQLQKEL  138 (148)
T ss_pred             HHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9    3333333  7777888877666655544

This protein is involved in nucleolar processing of pre-18S ribosomal RNA, and is required for optimal pre-ribosomal RNA transcription by RNA polymerase I together with a subset of U3 proteins required for transcription (t-UTPs). UTP15 is a component of the ribosomal small subunit (SSU) processome, which is a large ribonucleoprotein (RNP) required for processing of precursors to the small subunit RNA, the 18S, of the ribosome [, ]. This domain is found C-terminal to the WD40 repeat (IPR001680 from INTERPRO). UTP15 associates with U3 snoRNA, which is ubiquitous in eukaryotes and is required for nucleolar processing of pre-18S ribosomal RNA []. ; GO: 0006364 rRNA processing, 0005730 nucleolus

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=94.66  E-value=2.4  Score=45.73  Aligned_cols=204  Identities=12%  Similarity=0.118  Sum_probs=99.6

Q ss_pred             cccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEe--c------CCCcEEEEEEec-----CC---CE
Q psy7108          42 VLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETI--Q------LLSDALCVAYKP-----DG---TE  105 (703)
Q Consensus        42 ~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~--~------~~~~V~~v~~sp-----dg---~~  105 (703)
                      .+....++|++++.|   |=.++|.|..+|.+.|.|++....+....  .      ....++++.|+.     |+   -.
T Consensus        81 l~~~~~g~vtal~~S---~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~  157 (395)
T PF08596_consen   81 LLDAKQGPVTALKNS---DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSIC  157 (395)
T ss_dssp             EE---S-SEEEEEE----BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEE
T ss_pred             heeccCCcEeEEecC---CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceE
Confidence            345568999999997   45799999999999999997664333211  1      234578888862     33   36


Q ss_pred             EEEEECCCeEEEEEcC--C-CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEE-EcCC-C---------------
Q psy7108         106 IVVATLDGQLIMFDVE--S-AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVC-YSAD-G---------------  165 (703)
Q Consensus       106 las~s~dg~I~vwd~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~-~spd-g---------------  165 (703)
                      +++|+..|.+.+|.+.  . +.-...+....                ..+.++|..+. ++.+ |               
T Consensus       158 L~vGTn~G~v~~fkIlp~~~g~f~v~~~~~~----------------~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~  221 (395)
T PF08596_consen  158 LLVGTNSGNVLTFKILPSSNGRFSVQFAGAT----------------TNHDSPILSIIPINADTGESALATISAMQGLSK  221 (395)
T ss_dssp             EEEEETTSEEEEEEEEE-GGG-EEEEEEEEE------------------SS----EEEEEETTT--B-B-BHHHHHGGGG
T ss_pred             EEEEeCCCCEEEEEEecCCCCceEEEEeecc----------------ccCCCceEEEEEEECCCCCcccCchhHhhcccc
Confidence            8889999999999774  1 21111111111                00111222222 2111 0               


Q ss_pred             ----CEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeec-----cCCCEEEEEcccCCCCCeeEEECC
Q psy7108         166 ----SCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMT-----EFGNVSLIETRETHEGGNVVLKLP  236 (703)
Q Consensus       166 ----~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-----pdg~~l~~~~~~~~~~~~~~i~iw  236 (703)
                          ..+++...+..++++...+.+...+.. ...       .....+.+-     ..+..++.-..+|      .++++
T Consensus       222 g~~i~g~vVvvSe~~irv~~~~~~k~~~K~~-~~~-------~~~~~~~vv~~~~~~~~~~Lv~l~~~G------~i~i~  287 (395)
T PF08596_consen  222 GISIPGYVVVVSESDIRVFKPPKSKGAHKSF-DDP-------FLCSSASVVPTISRNGGYCLVCLFNNG------SIRIY  287 (395)
T ss_dssp             T----EEEEEE-SSEEEEE-TT---EEEEE--SS--------EEEEEEEEEEEE-EEEEEEEEEEETTS------EEEEE
T ss_pred             CCCcCcEEEEEcccceEEEeCCCCcccceee-ccc-------cccceEEEEeecccCCceEEEEEECCC------cEEEE
Confidence                223444456789999998877655433 111       012223332     2334444444433      67777


Q ss_pred             CCCCCccceeecC----CccceEEEEEcCCCCEEEEEeCCCEEEEE
Q psy7108         237 GVKKGDMAARVLK----PEVRVFCVKFSPTGQAWVAATTEGVHIYS  278 (703)
Q Consensus       237 d~~~~~~~~~~~~----h~~~V~~l~~spdg~~l~s~s~Dgv~iwd  278 (703)
                      .+-.-+.+....-    ....+...+++++|+.++..+...+.++.
T Consensus       288 SLP~Lkei~~~~l~~~~d~~~~~~ssis~~Gdi~~~~gpsE~~l~s  333 (395)
T PF08596_consen  288 SLPSLKEIKSVSLPPPLDSRRLSSSSISRNGDIFYWTGPSEIQLFS  333 (395)
T ss_dssp             ETTT--EEEEEE-SS---HHHHTT-EE-TTS-EEEE-SSSEEEEEE
T ss_pred             ECCCchHhhcccCCCccccccccccEECCCCCEEEEeCcccEEEEE
Confidence            6655544444332    22335567789999988777665544443

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=94.60  E-value=3.8  Score=42.94  Aligned_cols=175  Identities=15%  Similarity=0.237  Sum_probs=94.6

Q ss_pred             cEEEEEcCCCceeEEE-ecCCCcEEEEEE---ecC----CCEEEEEEC---------C-CeEEEEEcCCC----cEEEEE
Q psy7108          72 TVKLWNAVETDTQHET-IQLLSDALCVAY---KPD----GTEIVVATL---------D-GQLIMFDVESA----AQVGSV  129 (703)
Q Consensus        72 ~V~iWd~~~~~~~~~~-~~~~~~V~~v~~---spd----g~~las~s~---------d-g~I~vwd~~~~----~~~~~~  129 (703)
                      .|++.|..+.+.+... +...+.+.+++.   ..+    ..+|++|+.         . |.|.++++...    ..+..+
T Consensus         3 ~i~l~d~~~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i   82 (321)
T PF03178_consen    3 SIRLVDPTTFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLI   82 (321)
T ss_dssp             EEEEEETTTSSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEE
T ss_pred             EEEEEeCCCCeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEE
Confidence            5777777666544222 223444555443   322    357777654         2 88999999884    222222


Q ss_pred             eccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCc-eEEEEEeccCCcccccccccee
Q psy7108         130 EARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGI-LLKKFTITQNKSLDGINDFINR  208 (703)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~-~~~~~~~~~~~~~~~~~~~v~~  208 (703)
                      ..+.                  ..++|++++-- +++ |+++. ++.|.+|++...+ ....-..+..       ..+.+
T Consensus        83 ~~~~------------------~~g~V~ai~~~-~~~-lv~~~-g~~l~v~~l~~~~~l~~~~~~~~~-------~~i~s  134 (321)
T PF03178_consen   83 HSTE------------------VKGPVTAICSF-NGR-LVVAV-GNKLYVYDLDNSKTLLKKAFYDSP-------FYITS  134 (321)
T ss_dssp             EEEE------------------ESS-EEEEEEE-TTE-EEEEE-TTEEEEEEEETTSSEEEEEEE-BS-------SSEEE
T ss_pred             EEEe------------------ecCcceEhhhh-CCE-EEEee-cCEEEEEEccCcccchhhheecce-------EEEEE
Confidence            2111                  13478888765 344 55444 4789999998877 4443332221       13344


Q ss_pred             eeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceee-cCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcC
Q psy7108         209 RKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARV-LKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLD  280 (703)
Q Consensus       209 ~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~-~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~  280 (703)
                      +.  ..+.+++++....   + ..+.-|+....+..... ......++++.|-++++.++.+..+| +.++..+
T Consensus       135 l~--~~~~~I~vgD~~~---s-v~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~  202 (321)
T PF03178_consen  135 LS--VFKNYILVGDAMK---S-VSLLRYDEENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYN  202 (321)
T ss_dssp             EE--EETTEEEEEESSS---S-EEEEEEETTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-
T ss_pred             Ee--ccccEEEEEEccc---C-EEEEEEEccCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEEC
Confidence            43  3455777665432   1 23333444222222111 12345688899987778889999999 8888876

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>PRK10749 lysophospholipase L2; Provisional

Probab=94.54  E-value=0.0055  Score=64.83  Aligned_cols=51  Identities=18%  Similarity=0.080  Sum_probs=33.0

Q ss_pred             CchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108         530 DTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  583 (703)
Q Consensus       530 d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~  583 (703)
                      |+.+.++.+....+..+++++|||+||..+...+.+.|+   .++..+..+|..
T Consensus       116 d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~---~v~~lvl~~p~~  166 (330)
T PRK10749        116 DLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPG---VFDAIALCAPMF  166 (330)
T ss_pred             HHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCC---CcceEEEECchh
Confidence            555555554433345789999999999877655555543   455666666653

>KOG2444|consensus

Probab=94.39  E-value=0.12  Score=49.71  Aligned_cols=106  Identities=10%  Similarity=0.111  Sum_probs=64.9

Q ss_pred             CCCEEEEEeCCCcEEEEEcCCCceeEEEec-CCCcEEE-EEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCC
Q psy7108          60 SSTGMVSASWDKTVKLWNAVETDTQHETIQ-LLSDALC-VAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDS  137 (703)
Q Consensus        60 dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~-~~~~V~~-v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~  137 (703)
                      -+..++.|+.+|.|.+|+............ ....|.+ +.--.++.+.++++.||.|+.|++.-.+.+.....|..   
T Consensus        69 ~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~---  145 (238)
T KOG2444|consen   69 ASAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNF---  145 (238)
T ss_pred             cCceEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCceeeeccccCceeeeeccccC---
Confidence            346788899999999998753222222222 2223333 33334556888999999999999988887766655541   


Q ss_pred             CCCCCccchhhcccCCccEEEEEEcCCCCEEEEE--ecCCcEEEEECCC
Q psy7108         138 GRLDTDLVTREQSLKAKAVSTVCYSADGSCILAA--GQSKYICIYSSRE  184 (703)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~--s~dg~I~lwD~~~  184 (703)
                                      .++.....+..++.++.+  |.|..++.|++..
T Consensus       146 ----------------~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~  178 (238)
T KOG2444|consen  146 ----------------ESGEELIVVGSDEFLKIADTSHDRVLKKWNVEK  178 (238)
T ss_pred             ----------------CCcceeEEecCCceEEeeccccchhhhhcchhh
Confidence                            133334444445555555  5666666666653

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=94.37  E-value=3.6  Score=45.26  Aligned_cols=158  Identities=8%  Similarity=0.065  Sum_probs=91.1

Q ss_pred             CcCeEEEEEcCCCCCCEEEEEe---CCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCC----CEEEEEECCCeEEEEE
Q psy7108          47 EGPVSCIEFSPVLSSTGMVSAS---WDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDG----TEIVVATLDGQLIMFD  119 (703)
Q Consensus        47 ~~~V~~l~~sp~~dg~~L~sgs---~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg----~~las~s~dg~I~vwd  119 (703)
                      -.+|..++|.   ||+.++-..   .+|.++.=|       ..+.+.-+.|..+.|.|-+    ..+.+....+.|.||.
T Consensus        19 iHPvhGlaWT---DGkqVvLT~L~l~~gE~kfGd-------s~viGqFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWq   88 (671)
T PF15390_consen   19 IHPVHGLAWT---DGKQVVLTDLQLHNGEPKFGD-------SKVIGQFEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQ   88 (671)
T ss_pred             hccccceEec---CCCEEEEEeeeeeCCccccCC-------ccEeeccceeeeeeecCcccCCCCceEEEeccceEEEEE
Confidence            4589999997   666554331   223333211       2334445669999999853    2455555678999998


Q ss_pred             cCC-----CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEec
Q psy7108         120 VES-----AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTIT  194 (703)
Q Consensus       120 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~  194 (703)
                      +..     ++.+..-..+-.            ...+.   --..+.|+|....|++-.....-.+++++......+....
T Consensus        89 L~~s~~e~~K~l~sQtcEi~------------e~~pv---LpQGCVWHPk~~iL~VLT~~dvSV~~sV~~d~srVkaDi~  153 (671)
T PF15390_consen   89 LCPSTTERNKLLMSQTCEIR------------EPFPV---LPQGCVWHPKKAILTVLTARDVSVLPSVHCDSSRVKADIK  153 (671)
T ss_pred             eccCccccccceeeeeeecc------------CCccc---CCCcccccCCCceEEEEecCceeEeeeeeeCCceEEEecc
Confidence            852     222222211110            00000   1134679999888877665554456666543322222211


Q ss_pred             cCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC
Q psy7108         195 QNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG  241 (703)
Q Consensus       195 ~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~  241 (703)
                      .       ...|.|.+|..||+.++++-+..     ..-++||-...
T Consensus       154 ~-------~G~IhCACWT~DG~RLVVAvGSs-----LHSyiWd~~qK  188 (671)
T PF15390_consen  154 T-------SGLIHCACWTKDGQRLVVAVGSS-----LHSYIWDSAQK  188 (671)
T ss_pred             C-------CceEEEEEecCcCCEEEEEeCCe-----EEEEEecCchh
Confidence            1       23788999999999988876542     46789985543

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=94.30  E-value=1.3  Score=48.63  Aligned_cols=118  Identities=16%  Similarity=0.164  Sum_probs=71.2

Q ss_pred             cEEEEEEcCCC----CEEEEEecCCcEEEEECCC-----CceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccC
Q psy7108         155 AVSTVCYSADG----SCILAAGQSKYICIYSSRE-----GILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRET  225 (703)
Q Consensus       155 ~V~~i~~spdg----~~l~s~s~dg~I~lwD~~~-----~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~  225 (703)
                      .|..++|.|-+    -.+++.-..+.|.+|.+..     ++.+.....+-...+.   ---..+.|+|....+.+-+..+
T Consensus        58 hV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~p---vLpQGCVWHPk~~iL~VLT~~d  134 (671)
T PF15390_consen   58 HVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFP---VLPQGCVWHPKKAILTVLTARD  134 (671)
T ss_pred             eeeeeeecCcccCCCCceEEEeccceEEEEEeccCccccccceeeeeeeccCCcc---cCCCcccccCCCceEEEEecCc
Confidence            58899999842    2445555668899998852     2332222211111111   1224578999999887766543


Q ss_pred             CCCCeeEEECCCCCCCc-cceeecCCccceEEEEEcCCCCEEEEEeCCC--EEEEEcCC
Q psy7108         226 HEGGNVVLKLPGVKKGD-MAARVLKPEVRVFCVKFSPTGQAWVAATTEG--VHIYSLDS  281 (703)
Q Consensus       226 ~~~~~~~i~iwd~~~~~-~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg--v~iwd~~~  281 (703)
                            .-.+++++... .+..-....+.|.|.+|.+||+.|+++-...  -+|||-..
T Consensus       135 ------vSV~~sV~~d~srVkaDi~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~q  187 (671)
T PF15390_consen  135 ------VSVLPSVHCDSSRVKADIKTSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSAQ  187 (671)
T ss_pred             ------eeEeeeeeeCCceEEEeccCCceEEEEEecCcCCEEEEEeCCeEEEEEecCch
Confidence                  22344444322 2222235667899999999999997776556  67998543

>PHA02857 monoglyceride lipase; Provisional

Probab=94.26  E-value=0.034  Score=56.98  Aligned_cols=52  Identities=21%  Similarity=0.240  Sum_probs=38.8

Q ss_pred             chHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccc
Q psy7108         612 DTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF  666 (703)
Q Consensus       612 d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~  666 (703)
                      |+-+.++++...-...+++++|||+|+.+++.+....|+   .++.+++++|.+.
T Consensus        82 d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~---~i~~lil~~p~~~  133 (276)
T PHA02857         82 DVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPN---LFTAMILMSPLVN  133 (276)
T ss_pred             HHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCcc---ccceEEEeccccc
Confidence            344555555544445579999999999999888877665   5788899999765

>PLN02298 hydrolase, alpha/beta fold family protein

Probab=94.24  E-value=0.017  Score=61.09  Aligned_cols=53  Identities=19%  Similarity=0.166  Sum_probs=36.5

Q ss_pred             cCCchhhHHHhHccC--CCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108         528 LYDTTATIDYILNQT--GHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  583 (703)
Q Consensus       528 ~~d~~~~~~~i~~~~--~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~  583 (703)
                      ..|+.++++++....  ...++.++|||+||..++....+.|+   +++.+++.+|..
T Consensus       115 ~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~---~v~~lvl~~~~~  169 (330)
T PLN02298        115 VEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPE---GFDGAVLVAPMC  169 (330)
T ss_pred             HHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcc---cceeEEEecccc
Confidence            467788888887542  13479999999999877665555543   466666666643

>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]

Probab=94.19  E-value=0.009  Score=62.58  Aligned_cols=54  Identities=20%  Similarity=0.246  Sum_probs=40.9

Q ss_pred             hcccCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhh
Q psy7108         525 ELGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWA  580 (703)
Q Consensus       525 ~~g~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~  580 (703)
                      ++-+.++..+++.|.+.+++.++-.+|||+||+....+++..+..  +++.++.+.
T Consensus       161 dYi~e~l~~aid~v~~itg~~~InliGyCvGGtl~~~ala~~~~k--~I~S~T~lt  214 (445)
T COG3243         161 DYILEGLSEAIDTVKDITGQKDINLIGYCVGGTLLAAALALMAAK--RIKSLTLLT  214 (445)
T ss_pred             HHHHHHHHHHHHHHHHHhCccccceeeEecchHHHHHHHHhhhhc--ccccceeee
Confidence            444456778999999999999999999999998777777654432  466555543

>KOG2395|consensus

Probab=94.13  E-value=0.89  Score=49.01  Aligned_cols=146  Identities=14%  Similarity=0.055  Sum_probs=92.5

Q ss_pred             CCCEE-EEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCE-------EEEEec
Q psy7108         102 DGTEI-VVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSC-------ILAAGQ  173 (703)
Q Consensus       102 dg~~l-as~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~-------l~s~s~  173 (703)
                      +.++| .++.....++-.|++.|+.+....-+.+                     |+-+.+.|+.+.       -+.|-.
T Consensus       344 dsnlil~~~~~~~~l~klDIE~GKIVeEWk~~~d---------------------i~mv~~t~d~K~~Ql~~e~TlvGLs  402 (644)
T KOG2395|consen  344 DSNLILMDGGEQDKLYKLDIERGKIVEEWKFEDD---------------------INMVDITPDFKFAQLTSEQTLVGLS  402 (644)
T ss_pred             ccceEeeCCCCcCcceeeecccceeeeEeeccCC---------------------cceeeccCCcchhcccccccEEeec
Confidence            33433 3444556788999999999999888764                     566777776532       234667


Q ss_pred             CCcEEEEECCCCce--EEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCc
Q psy7108         174 SKYICIYSSREGIL--LKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPE  251 (703)
Q Consensus       174 dg~I~lwD~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~  251 (703)
                      |+.|+-||+|-...  +..-+.+.-   . ......|.+-..+|. +++++..|      -|++||...-+....+.+..
T Consensus       403 ~n~vfriDpRv~~~~kl~~~q~kqy---~-~k~nFsc~aTT~sG~-IvvgS~~G------dIRLYdri~~~AKTAlPgLG  471 (644)
T KOG2395|consen  403 DNSVFRIDPRVQGKNKLAVVQSKQY---S-TKNNFSCFATTESGY-IVVGSLKG------DIRLYDRIGRRAKTALPGLG  471 (644)
T ss_pred             CCceEEecccccCcceeeeeecccc---c-cccccceeeecCCce-EEEeecCC------cEEeehhhhhhhhhcccccC
Confidence            88999999984322  111111110   0 011345555556664 45555543      69999973334444566778


Q ss_pred             cceEEEEEcCCCCEEEEEeCCCEEEEEc
Q psy7108         252 VRVFCVKFSPTGQAWVAATTEGVHIYSL  279 (703)
Q Consensus       252 ~~V~~l~~spdg~~l~s~s~Dgv~iwd~  279 (703)
                      .+|..+..+.||+++++.+..-+.+.++
T Consensus       472 ~~I~hVdvtadGKwil~Tc~tyLlLi~t  499 (644)
T KOG2395|consen  472 DAIKHVDVTADGKWILATCKTYLLLIDT  499 (644)
T ss_pred             CceeeEEeeccCcEEEEecccEEEEEEE
Confidence            8999999999999988777655655554

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=94.06  E-value=0.17  Score=36.11  Aligned_cols=32  Identities=19%  Similarity=0.327  Sum_probs=28.8

Q ss_pred             CcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCC
Q psy7108          47 EGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVET   81 (703)
Q Consensus        47 ~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~   81 (703)
                      ...|.+++|+|  ..++||.|+.||.|.++.+ ++
T Consensus        11 ~~~v~~~~w~P--~mdLiA~~t~~g~v~v~Rl-~~   42 (47)
T PF12894_consen   11 PSRVSCMSWCP--TMDLIALGTEDGEVLVYRL-NW   42 (47)
T ss_pred             CCcEEEEEECC--CCCEEEEEECCCeEEEEEC-CC
Confidence            45799999999  9999999999999999998 44

>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II

Probab=93.97  E-value=0.03  Score=61.87  Aligned_cols=49  Identities=20%  Similarity=0.167  Sum_probs=36.6

Q ss_pred             CchhhHHHhHccCCCcceEEEEEecCceeeee----ccCCCchhhhhHHHhhhhh
Q psy7108         530 DTTATIDYILNQTGHNSLITLGHSLGTTNVLI----AGSLRPEYQTKVRLNVLWA  580 (703)
Q Consensus       530 d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~----~~~~~~~~~~~~~~~~~~~  580 (703)
                      .+.++++.|...++..++.++|||+||++..+    +.+++++  ++|+.++.++
T Consensus       273 ~i~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~--~~V~sltlla  325 (560)
T TIGR01839       273 ALKEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQL--RKVNSLTYLV  325 (560)
T ss_pred             HHHHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCC--CceeeEEeee
Confidence            67889999999999999999999999987665    3344331  1466555554

This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=93.87  E-value=8.2  Score=39.01  Aligned_cols=127  Identities=18%  Similarity=0.263  Sum_probs=84.1

Q ss_pred             cCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEec--CCCcEEEEEEecCCCEEEEEECCCeEEEEEcC
Q psy7108          44 SGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQ--LLSDALCVAYKPDGTEIVVATLDGQLIMFDVE  121 (703)
Q Consensus        44 ~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~--~~~~V~~v~~spdg~~las~s~dg~I~vwd~~  121 (703)
                      .|-...|+++.|+|  +.+.|++......-.||=-.+|+.+ ....  .-+....+.+.-+|++.++--.++.+.++.++
T Consensus        82 ~g~~~nvS~LTynp--~~rtLFav~n~p~~iVElt~~Gdli-rtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd  158 (316)
T COG3204          82 LGETANVSSLTYNP--DTRTLFAVTNKPAAIVELTKEGDLI-RTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVD  158 (316)
T ss_pred             ccccccccceeeCC--CcceEEEecCCCceEEEEecCCceE-EEecccccCChhHeEEecCCEEEEEehhcceEEEEEEc
Confidence            45556699999999  8888887777666666655555433 3332  33455678888888888887778899988887


Q ss_pred             CCcEEEEEeccccCCCCCCCCccchhhcc-cCCccEEEEEEcCCCCEEEEEecCCcEEEEECCC
Q psy7108         122 SAAQVGSVEARRDLDSGRLDTDLVTREQS-LKAKAVSTVCYSADGSCILAAGQSKYICIYSSRE  184 (703)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~  184 (703)
                      ....+..+....           ...... ........++|+|....|..+-.-+-+.||.+..
T Consensus       159 ~~t~~~~~~~~~-----------i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~  211 (316)
T COG3204         159 ADTTVISAKVQK-----------IPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQ  211 (316)
T ss_pred             CCccEEeccceE-----------EeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEec
Confidence            664433322210           000111 1145788999999988888887777777776653

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=93.73  E-value=3.4  Score=43.31  Aligned_cols=114  Identities=11%  Similarity=0.115  Sum_probs=72.7

Q ss_pred             CCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEE--ecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCC
Q psy7108          45 GHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHET--IQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVES  122 (703)
Q Consensus        45 gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~--~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~  122 (703)
                      ...++|++++--.   +. |+.+. .+.|.+|++...+.....  ......+.++...  ++++++|...+.+.++..+.
T Consensus        86 ~~~g~V~ai~~~~---~~-lv~~~-g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~--~~~I~vgD~~~sv~~~~~~~  158 (321)
T PF03178_consen   86 EVKGPVTAICSFN---GR-LVVAV-GNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVF--KNYILVGDAMKSVSLLRYDE  158 (321)
T ss_dssp             EESS-EEEEEEET---TE-EEEEE-TTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEE--TTEEEEEESSSSEEEEEEET
T ss_pred             eecCcceEhhhhC---CE-EEEee-cCEEEEEEccCcccchhhheecceEEEEEEecc--ccEEEEEEcccCEEEEEEEc
Confidence            3478899988764   44 44443 368999999877623322  2233456666555  66999999888888875543


Q ss_pred             -CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECC
Q psy7108         123 -AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSR  183 (703)
Q Consensus       123 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~  183 (703)
                       ...+..+.....                  ...++++++-+|++.++++..+|.+.++...
T Consensus       159 ~~~~l~~va~d~~------------------~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~  202 (321)
T PF03178_consen  159 ENNKLILVARDYQ------------------PRWVTAAEFLVDEDTIIVGDKDGNLFVLRYN  202 (321)
T ss_dssp             TTE-EEEEEEESS-------------------BEEEEEEEE-SSSEEEEEETTSEEEEEEE-
T ss_pred             cCCEEEEEEecCC------------------CccEEEEEEecCCcEEEEEcCCCeEEEEEEC
Confidence             332333322211                  2268899998777789999999999998775

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []

Probab=93.60  E-value=0.069  Score=52.32  Aligned_cols=52  Identities=31%  Similarity=0.241  Sum_probs=35.5

Q ss_pred             chHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCC----------chHHHHHHHheecccc
Q psy7108         612 DTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLR----------PEYQTKVRLNVLWAQS  664 (703)
Q Consensus       612 d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~----------~~~~~~i~~~~~l~p~  664 (703)
                      .+.++|+-|+..||. |+..||||||+++...++...          +-+..++..|+.++.+
T Consensus        61 ~l~~fI~~Vl~~TGa-kVDIVgHS~G~~iaR~yi~~~~~~d~~~~lg~~~~~~v~t~v~lag~  122 (219)
T PF01674_consen   61 QLRAFIDAVLAYTGA-KVDIVGHSMGGTIARYYIKGGGGADKVVNLGPPLTSKVGTFVGLAGA  122 (219)
T ss_dssp             HHHHHHHHHHHHHT---EEEEEETCHHHHHHHHHHHCTGGGTEEE----GGG-EEEEEEES--
T ss_pred             HHHHHHHHHHHhhCC-EEEEEEcCCcCHHHHHHHHHcCCCCcccCcccccccccccccccccc
Confidence            466899999999999 999999999999976665421          1234566677777743

This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....

>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]

Probab=93.52  E-value=0.074  Score=55.96  Aligned_cols=59  Identities=19%  Similarity=0.195  Sum_probs=46.7

Q ss_pred             eeeeeecchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecc-ccc
Q psy7108         605 IFQVGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWA-QSA  665 (703)
Q Consensus       605 ~~e~~~~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~-p~~  665 (703)
                      |++...=++-..||.|.+.||+++++.+||++|||...++++-.+..  +|+.+.+|. |+.
T Consensus       159 ~edYi~e~l~~aid~v~~itg~~~InliGyCvGGtl~~~ala~~~~k--~I~S~T~lts~~D  218 (445)
T COG3243         159 LEDYILEGLSEAIDTVKDITGQKDINLIGYCVGGTLLAAALALMAAK--RIKSLTLLTSPVD  218 (445)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCccccceeeEecchHHHHHHHHhhhhc--ccccceeeecchh
Confidence            44444445667999999999999999999999999999999886654  688777666 443

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=93.49  E-value=5.4  Score=40.24  Aligned_cols=169  Identities=8%  Similarity=0.102  Sum_probs=102.4

Q ss_pred             ecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCE
Q psy7108          88 IQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSC  167 (703)
Q Consensus        88 ~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~  167 (703)
                      .+....+.++.|+|+.+.|++......-.|+=..+|+.++++.-..-                   .....|.|..+|++
T Consensus        82 ~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~-------------------~DpE~Ieyig~n~f  142 (316)
T COG3204          82 LGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGF-------------------SDPETIEYIGGNQF  142 (316)
T ss_pred             ccccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEeccccc-------------------CChhHeEEecCCEE
Confidence            44555699999999999998888777777776678888888764321                   12456888888888


Q ss_pred             EEEEecCCcEEEEECCCCceEEEEEe---ccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCc-c
Q psy7108         168 ILAAGQSKYICIYSSREGILLKKFTI---TQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGD-M  243 (703)
Q Consensus       168 l~s~s~dg~I~lwD~~~~~~~~~~~~---~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~-~  243 (703)
                      .++--+++.+.++.+.....+.....   +-+..... +.....++|+|..+.+++.-...    ...|..|+..... .
T Consensus       143 vi~dER~~~l~~~~vd~~t~~~~~~~~~i~L~~~~k~-N~GfEGlA~d~~~~~l~~aKEr~----P~~I~~~~~~~~~l~  217 (316)
T COG3204         143 VIVDERDRALYLFTVDADTTVISAKVQKIPLGTTNKK-NKGFEGLAWDPVDHRLFVAKERN----PIGIFEVTQSPSSLS  217 (316)
T ss_pred             EEEehhcceEEEEEEcCCccEEeccceEEeccccCCC-CcCceeeecCCCCceEEEEEccC----CcEEEEEecCCcccc
Confidence            88888889998888776533322211   11100111 33566799999998888765432    1234444422110 1


Q ss_pred             ceeecCC-------ccceEEEEEcCCCCEEEE-EeCCC-EEEEEcC
Q psy7108         244 AARVLKP-------EVRVFCVKFSPTGQAWVA-ATTEG-VHIYSLD  280 (703)
Q Consensus       244 ~~~~~~h-------~~~V~~l~~spdg~~l~s-~s~Dg-v~iwd~~  280 (703)
                      ......+       -..|.++.|++..+.|.+ +.+++ +.-.+..
T Consensus       218 ~~~~~~~~~~~~~f~~DvSgl~~~~~~~~LLVLS~ESr~l~Evd~~  263 (316)
T COG3204         218 VHASLDPTADRDLFVLDVSGLEFNAITNSLLVLSDESRRLLEVDLS  263 (316)
T ss_pred             cccccCcccccceEeeccccceecCCCCcEEEEecCCceEEEEecC
Confidence            1111111       134777888876555544 44444 5555554

>KOG4499|consensus

Probab=93.05  E-value=8.1  Score=37.64  Aligned_cols=79  Identities=13%  Similarity=0.081  Sum_probs=48.1

Q ss_pred             ceeeeeccCCCEEEEEcccCCCCCeeEEECCC--CCCCccce-----eecC----CccceEEEEEcCCCCEEEEEeCCC-
Q psy7108         206 INRRKMTEFGNVSLIETRETHEGGNVVLKLPG--VKKGDMAA-----RVLK----PEVRVFCVKFSPTGQAWVAATTEG-  273 (703)
Q Consensus       206 v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd--~~~~~~~~-----~~~~----h~~~V~~l~~spdg~~l~s~s~Dg-  273 (703)
                      -+.++|+.+.+.+++..+..     ..|.-||  ..+|....     .+..    ..-..-.++...+|+..+++-+.+ 
T Consensus       160 sNgl~Wd~d~K~fY~iDsln-----~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~  234 (310)
T KOG4499|consen  160 SNGLAWDSDAKKFYYIDSLN-----YEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGT  234 (310)
T ss_pred             CccccccccCcEEEEEccCc-----eEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcE
Confidence            35688998888766654432     4676665  66664321     1111    011123455566777766666666 


Q ss_pred             EEEEEcCCCceeccee
Q psy7108         274 VHIYSLDSGYVFDPFL  289 (703)
Q Consensus       274 v~iwd~~~~~~~~~~~  289 (703)
                      |.-.|..+|+.+..+.
T Consensus       235 V~~~dp~tGK~L~eik  250 (310)
T KOG4499|consen  235 VQKVDPTTGKILLEIK  250 (310)
T ss_pred             EEEECCCCCcEEEEEE
Confidence            8889999999877665

>PRK10566 esterase; Provisional

Probab=93.04  E-value=0.026  Score=56.87  Aligned_cols=42  Identities=17%  Similarity=0.089  Sum_probs=31.6

Q ss_pred             ccCCchhhHHHhHccC--CCcceEEEEEecCceeeeeccCCCch
Q psy7108         527 GLYDTTATIDYILNQT--GHNSLITLGHSLGTTNVLIAGSLRPE  568 (703)
Q Consensus       527 g~~d~~~~~~~i~~~~--~~~~~~~~g~S~G~~~~~~~~~~~~~  568 (703)
                      .+.|+.+.++|+.+..  +.++++++|||+||++++.++.+.|+
T Consensus        87 ~~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~  130 (249)
T PRK10566         87 NMQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPW  130 (249)
T ss_pred             HHHHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCC
Confidence            3456677888888664  35799999999999888776665554

>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase

Probab=93.01  E-value=0.23  Score=50.84  Aligned_cols=40  Identities=20%  Similarity=0.113  Sum_probs=34.1

Q ss_pred             CCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccc
Q psy7108         624 TGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF  666 (703)
Q Consensus       624 t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~  666 (703)
                      .+.++++++|||+|+.+++.++..+|+   .|+.+++++|.+.
T Consensus        88 l~~~~~~LvG~S~GG~va~~~a~~~p~---~v~~lvl~~~~~~  127 (276)
T TIGR02240        88 LDYGQVNAIGVSWGGALAQQFAHDYPE---RCKKLILAATAAG  127 (276)
T ss_pred             hCcCceEEEEECHHHHHHHHHHHHCHH---HhhheEEeccCCc
Confidence            455689999999999999999888664   7999999998765

This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.

>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated

Probab=93.00  E-value=0.022  Score=57.79  Aligned_cols=51  Identities=27%  Similarity=0.391  Sum_probs=37.2

Q ss_pred             CCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108         529 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  583 (703)
Q Consensus       529 ~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~  583 (703)
                      .|+.++++|+.+. +..++.++|||+||..++....+.|   .++..++.++|+.
T Consensus        84 ~Dv~~ai~~L~~~-~~~~v~LvG~SmGG~vAl~~A~~~p---~~v~~lVL~~P~~  134 (266)
T TIGR03101        84 EDVAAAYRWLIEQ-GHPPVTLWGLRLGALLALDAANPLA---AKCNRLVLWQPVV  134 (266)
T ss_pred             HHHHHHHHHHHhc-CCCCEEEEEECHHHHHHHHHHHhCc---cccceEEEecccc
Confidence            5667788888765 4678999999999987776555443   3566677777764

This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=92.88  E-value=3.9  Score=35.06  Aligned_cols=66  Identities=17%  Similarity=0.271  Sum_probs=49.0

Q ss_pred             EEEEEEec---CC-CEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEE
Q psy7108          94 ALCVAYKP---DG-TEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCIL  169 (703)
Q Consensus        94 V~~v~~sp---dg-~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~  169 (703)
                      |+++++..   || +.|++|+.|..|++|+-+  +.+..+....                     .|++++-... ..++
T Consensus         2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~--e~~~Ei~e~~---------------------~v~~L~~~~~-~~F~   57 (111)
T PF14783_consen    2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGD--EIVAEITETD---------------------KVTSLCSLGG-GRFA   57 (111)
T ss_pred             eeEEEEEecCCCCcceEEEecCCcEEEEEeCC--cEEEEEeccc---------------------ceEEEEEcCC-CEEE
Confidence            56666554   33 589999999999999743  5566665544                     5788887765 5688


Q ss_pred             EEecCCcEEEEECC
Q psy7108         170 AAGQSKYICIYSSR  183 (703)
Q Consensus       170 s~s~dg~I~lwD~~  183 (703)
                      .+..+|+|-+|+-.
T Consensus        58 Y~l~NGTVGvY~~~   71 (111)
T PF14783_consen   58 YALANGTVGVYDRS   71 (111)
T ss_pred             EEecCCEEEEEeCc
Confidence            88999999999853

>KOG4409|consensus

Probab=92.88  E-value=0.34  Score=49.88  Aligned_cols=47  Identities=23%  Similarity=0.261  Sum_probs=40.5

Q ss_pred             HhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccccCCC
Q psy7108         621 LNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLGNL  670 (703)
Q Consensus       621 ~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~~~~  670 (703)
                      +...|-+|.+++|||.||-.++.++-.+|+   +|+.+++.+|+.+....
T Consensus       154 R~~~~L~KmilvGHSfGGYLaa~YAlKyPe---rV~kLiLvsP~Gf~~~~  200 (365)
T KOG4409|consen  154 RKKMGLEKMILVGHSFGGYLAAKYALKYPE---RVEKLILVSPWGFPEKP  200 (365)
T ss_pred             HHHcCCcceeEeeccchHHHHHHHHHhChH---hhceEEEecccccccCC
Confidence            445677899999999999999999988676   59999999999988765

>PHA03098 kelch-like protein; Provisional

Probab=92.81  E-value=2.7  Score=47.60  Aligned_cols=192  Identities=9%  Similarity=0.038  Sum_probs=86.3

Q ss_pred             CCCEEEEEeCCC------cEEEEEcCCCceeEEEecCC-CcEEEEEEecCCCEEEEEECCC-----eEEEEEcCCCcEEE
Q psy7108          60 SSTGMVSASWDK------TVKLWNAVETDTQHETIQLL-SDALCVAYKPDGTEIVVATLDG-----QLIMFDVESAAQVG  127 (703)
Q Consensus        60 dg~~L~sgs~Dg------~V~iWd~~~~~~~~~~~~~~-~~V~~v~~spdg~~las~s~dg-----~I~vwd~~~~~~~~  127 (703)
                      ++..++.|+.++      .+..||..+..- ....... ......+..-+++..+.||.++     .+..||..+.+-..
T Consensus       294 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W-~~~~~~~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~  372 (534)
T PHA03098        294 NNVIYFIGGMNKNNLSVNSVVSYDTKTKSW-NKVPELIYPRKNPGVTVFNNRIYVIGGIYNSISLNTVESWKPGESKWRE  372 (534)
T ss_pred             CCEEEEECCCcCCCCeeccEEEEeCCCCee-eECCCCCcccccceEEEECCEEEEEeCCCCCEecceEEEEcCCCCceee
Confidence            566777776543      456777765532 1111111 1111112223577777777652     46677766553221


Q ss_pred             EEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC------CcEEEEECCCCceEEEEEeccCCcccc
Q psy7108         128 SVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS------KYICIYSSREGILLKKFTITQNKSLDG  201 (703)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d------g~I~lwD~~~~~~~~~~~~~~~~~~~~  201 (703)
                      .    ....          ..    .... +++ .-+++..+.|+.+      +.+..||+.+++-...-..+..  .. 
T Consensus       373 ~----~~lp----------~~----r~~~-~~~-~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~--r~-  429 (534)
T PHA03098        373 E----PPLI----------FP----RYNP-CVV-NVNNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPIS--HY-  429 (534)
T ss_pred             C----CCcC----------cC----Cccc-eEE-EECCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCcc--cc-
Confidence            0    0000          00    0011 112 2246666666632      4588899887654322111110  01 


Q ss_pred             ccccceeeeeccCCCEEEEEcccCCCC--CeeEEECCCCCCCccc--eeecCCccceEEEEEcCCCCEEEEEeCC-----
Q psy7108         202 INDFINRRKMTEFGNVSLIETRETHEG--GNVVLKLPGVKKGDMA--ARVLKPEVRVFCVKFSPTGQAWVAATTE-----  272 (703)
Q Consensus       202 ~~~~v~~~~~spdg~~l~~~~~~~~~~--~~~~i~iwd~~~~~~~--~~~~~h~~~V~~l~~spdg~~l~s~s~D-----  272 (703)
                           ...+...+++.+++++......  ....+..||..+++-.  .....+......+.+  +++.++.|+.+     
T Consensus       430 -----~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~  502 (534)
T PHA03098        430 -----GGCAIYHDGKIYVIGGISYIDNIKVYNIVESYNPVTNKWTELSSLNFPRINASLCIF--NNKIYVVGGDKYEYYI  502 (534)
T ss_pred             -----CceEEEECCEEEEECCccCCCCCcccceEEEecCCCCceeeCCCCCcccccceEEEE--CCEEEEEcCCcCCccc
Confidence                 1122334566666655432111  1234788888765322  111111111222222  56666777654     


Q ss_pred             C-EEEEEcCCC
Q psy7108         273 G-VHIYSLDSG  282 (703)
Q Consensus       273 g-v~iwd~~~~  282 (703)
                      . +.+||..+.
T Consensus       503 ~~v~~yd~~~~  513 (534)
T PHA03098        503 NEIEVYDDKTN  513 (534)
T ss_pred             ceeEEEeCCCC
Confidence            2 667776654

>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT)

Probab=92.79  E-value=0.15  Score=50.53  Aligned_cols=49  Identities=29%  Similarity=0.281  Sum_probs=38.3

Q ss_pred             HHHHHHHHhhC-----CCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecc
Q psy7108         614 TATIDYILNQT-----GHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWA  662 (703)
Q Consensus       614 pa~i~~i~~~t-----~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~  662 (703)
                      -..+++|++.-     +.+++..|||||||.++..++...+....+|+.++.|+
T Consensus        67 ~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~  120 (225)
T PF07819_consen   67 AEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLG  120 (225)
T ss_pred             HHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEc
Confidence            34666666543     67889999999999999998887555557888888887

This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane

>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes

Probab=92.66  E-value=0.093  Score=53.79  Aligned_cols=53  Identities=21%  Similarity=0.265  Sum_probs=42.3

Q ss_pred             chHHHHHHHHhhC--CCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccccc
Q psy7108         612 DTTATIDYILNQT--GHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFL  667 (703)
Q Consensus       612 d~pa~i~~i~~~t--~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~  667 (703)
                      ++-++++++.+..  +.+++++||||+|+.++..+....|.   +|+.+++|.|+.-+
T Consensus        95 ~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~---~v~~iv~LDPa~p~  149 (275)
T cd00707          95 ELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNG---KLGRITGLDPAGPL  149 (275)
T ss_pred             HHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcC---ccceeEEecCCccc
Confidence            5667888887764  45789999999999998888776444   79999999988643

Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.

>PRK10673 acyl-CoA esterase; Provisional

Probab=92.59  E-value=0.11  Score=52.34  Aligned_cols=44  Identities=25%  Similarity=0.351  Sum_probs=32.9

Q ss_pred             chHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecc
Q psy7108         612 DTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWA  662 (703)
Q Consensus       612 d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~  662 (703)
                      |+-+.++.    -+..+++++|||+|++++..++..+|+   .|+.++.++
T Consensus        70 d~~~~l~~----l~~~~~~lvGhS~Gg~va~~~a~~~~~---~v~~lvli~  113 (255)
T PRK10673         70 DLLDTLDA----LQIEKATFIGHSMGGKAVMALTALAPD---RIDKLVAID  113 (255)
T ss_pred             HHHHHHHH----cCCCceEEEEECHHHHHHHHHHHhCHh---hcceEEEEe
Confidence            44455544    355679999999999999998887554   688888764

>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A

Probab=92.48  E-value=0.019  Score=56.00  Aligned_cols=45  Identities=27%  Similarity=0.400  Sum_probs=30.5

Q ss_pred             HHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108         536 DYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  583 (703)
Q Consensus       536 ~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~  583 (703)
                      ..+++.-+..++.++|||+||..++..+.+.|+   +++..+..+|..
T Consensus        57 ~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~---~v~~~vl~~~~~  101 (228)
T PF12697_consen   57 AELLDALGIKKVILVGHSMGGMIALRLAARYPD---RVKGLVLLSPPP  101 (228)
T ss_dssp             HHHHHHTTTSSEEEEEETHHHHHHHHHHHHSGG---GEEEEEEESESS
T ss_pred             hhccccccccccccccccccccccccccccccc---ccccceeecccc
Confidence            334444445789999999999877776655444   666666666554

...

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=92.26  E-value=10  Score=39.28  Aligned_cols=156  Identities=13%  Similarity=0.128  Sum_probs=76.8

Q ss_pred             ccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCC
Q psy7108          43 LSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVES  122 (703)
Q Consensus        43 l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~  122 (703)
                      ...-.+.+..+.-++  ||.+++.++......-||--...-..........|.++.|+|++...+.+ ..|.|+.=+.. 
T Consensus       140 ~~~~~gs~~~~~r~~--dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~-  215 (302)
T PF14870_consen  140 VSETSGSINDITRSS--DGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSDDP-  215 (302)
T ss_dssp             E-S----EEEEEE-T--TS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-T-
T ss_pred             ccCCcceeEeEEECC--CCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEEe-CCcEEEEccCC-
Confidence            344567889999999  99988888776556778743221222223356789999999998776654 78888877621 


Q ss_pred             CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccc
Q psy7108         123 AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGI  202 (703)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~  202 (703)
                       ....++..+..             +.....-.+..++|.+++...++|+. |.+ +.....|+.-+.-..     ....
T Consensus       216 -~~~~~w~~~~~-------------~~~~~~~~~ld~a~~~~~~~wa~gg~-G~l-~~S~DgGktW~~~~~-----~~~~  274 (302)
T PF14870_consen  216 -DDGETWSEPII-------------PIKTNGYGILDLAYRPPNEIWAVGGS-GTL-LVSTDGGKTWQKDRV-----GENV  274 (302)
T ss_dssp             -TEEEEE---B--------------TTSS--S-EEEEEESSSS-EEEEEST-T-E-EEESSTTSS-EE-GG-----GTTS
T ss_pred             -CCccccccccC-------------CcccCceeeEEEEecCCCCEEEEeCC-ccE-EEeCCCCccceECcc-----ccCC
Confidence             11222222110             00011225899999998877776654 544 344455544333221     1122


Q ss_pred             cccceeeeeccCCCEEEEEcc
Q psy7108         203 NDFINRRKMTEFGNVSLIETR  223 (703)
Q Consensus       203 ~~~v~~~~~spdg~~l~~~~~  223 (703)
                      ...+..+.|.++.+.++++..
T Consensus       275 ~~n~~~i~f~~~~~gf~lG~~  295 (302)
T PF14870_consen  275 PSNLYRIVFVNPDKGFVLGQD  295 (302)
T ss_dssp             SS---EEEEEETTEEEEE-ST
T ss_pred             CCceEEEEEcCCCceEEECCC
Confidence            335677888777666666443

>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase

Probab=91.92  E-value=0.22  Score=49.09  Aligned_cols=46  Identities=26%  Similarity=0.328  Sum_probs=35.1

Q ss_pred             HHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccc
Q psy7108         617 IDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  665 (703)
Q Consensus       617 i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~  665 (703)
                      +..++...+..+++++|||+|+.++..++..+|+   +++.+++++|..
T Consensus        60 ~~~~~~~~~~~~~~l~G~S~Gg~ia~~~a~~~~~---~v~~lil~~~~~  105 (251)
T TIGR03695        60 LATLLDQLGIEPFFLVGYSMGGRIALYYALQYPE---RVQGLILESGSP  105 (251)
T ss_pred             HHHHHHHcCCCeEEEEEeccHHHHHHHHHHhCch---heeeeEEecCCC
Confidence            3444555566789999999999999999888764   577777777654

This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.

>KOG2079|consensus

Probab=91.75  E-value=0.49  Score=55.04  Aligned_cols=75  Identities=21%  Similarity=0.342  Sum_probs=56.1

Q ss_pred             CCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEE
Q psy7108         102 DGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYS  181 (703)
Q Consensus       102 dg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD  181 (703)
                      .+..++.|+..|.+-..|+...  +..  .|.+               ..-.++|++++|+.||+.++.|-.+|.|.+||
T Consensus        98 ~~~~ivi~Ts~ghvl~~d~~~n--L~~--~~~n---------------e~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D  158 (1206)
T KOG2079|consen   98 VVVPIVIGTSHGHVLLSDMTGN--LGP--LHQN---------------ERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWD  158 (1206)
T ss_pred             eeeeEEEEcCchhhhhhhhhcc--cch--hhcC---------------CccCCcceeeEecCCCceeccccCCCcEEEEE
Confidence            4567888888899988887643  111  1111               01135899999999999999999999999999


Q ss_pred             CCCCceEEEEEecc
Q psy7108         182 SREGILLKKFTITQ  195 (703)
Q Consensus       182 ~~~~~~~~~~~~~~  195 (703)
                      +..++..+.+..+.
T Consensus       159 ~~~~k~l~~i~e~~  172 (1206)
T KOG2079|consen  159 MHRAKILKVITEHG  172 (1206)
T ss_pred             ccCCcceeeeeecC
Confidence            99988888776444

>KOG4441|consensus

Probab=91.70  E-value=3.4  Score=47.04  Aligned_cols=191  Identities=13%  Similarity=0.125  Sum_probs=98.6

Q ss_pred             CCCEEEEEeCCC------cEEEEEcCCCceeE-EEecCCCcEEEEEEecCCCEEEEEECC-C-----eEEEEEcCCCcEE
Q psy7108          60 SSTGMVSASWDK------TVKLWNAVETDTQH-ETIQLLSDALCVAYKPDGTEIVVATLD-G-----QLIMFDVESAAQV  126 (703)
Q Consensus        60 dg~~L~sgs~Dg------~V~iWd~~~~~~~~-~~~~~~~~V~~v~~spdg~~las~s~d-g-----~I~vwd~~~~~~~  126 (703)
                      .+.+++.|+.++      .+..+|..++.-.. .-......-.+++.. +|...++|+.| |     ++..||.++.+-.
T Consensus       284 ~~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~~~r~~~~~~~~-~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~  362 (571)
T KOG4441|consen  284 SGKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMPSPRCRVGVAVL-NGKLYVVGGYDSGSDRLSSVERYDPRTNQWT  362 (571)
T ss_pred             CCeEEEECCCCCCCcccceeEEecCCcCcEeecCCCCcccccccEEEE-CCEEEEEccccCCCcccceEEEecCCCCcee
Confidence            466777777763      56778877663111 111122233444444 46778888888 3     4777887766522


Q ss_pred             E--EEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCC-----cEEEEECCCCceEEEEEeccCCcc
Q psy7108         127 G--SVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSK-----YICIYSSREGILLKKFTITQNKSL  199 (703)
Q Consensus       127 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg-----~I~lwD~~~~~~~~~~~~~~~~~~  199 (703)
                      .  .+...+                    ......  .-+|...++|+.||     ++-.||.++.+....-.....   
T Consensus       363 ~~a~M~~~R--------------------~~~~v~--~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~~~---  417 (571)
T KOG4441|consen  363 PVAPMNTKR--------------------SDFGVA--VLDGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPMLTR---  417 (571)
T ss_pred             ccCCccCcc--------------------ccceeE--EECCEEEEEeccccccccccEEEecCCCCcccccCCCCcc---
Confidence            2  111100                    011111  22577778888885     477888776543211100000   


Q ss_pred             ccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccc--eeecCCccceEEEEEcCCCCEEEEEeCCC----
Q psy7108         200 DGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMA--ARVLKPEVRVFCVKFSPTGQAWVAATTEG----  273 (703)
Q Consensus       200 ~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~--~~~~~h~~~V~~l~~spdg~~l~s~s~Dg----  273 (703)
                           .-......-+|+.+++++.++....-.++..||..++.-.  ........... ++ .-++...+.|+.|+    
T Consensus       418 -----r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~~~g-~a-~~~~~iYvvGG~~~~~~~  490 (571)
T KOG4441|consen  418 -----RSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPETNTWTLIAPMNTRRSGFG-VA-VLNGKIYVVGGFDGTSAL  490 (571)
T ss_pred             -----eeeeEEEEECCEEEEEcCcCCCccccceEEEEcCCCCceeecCCcccccccce-EE-EECCEEEEECCccCCCcc
Confidence                 1111223346677777765554433467888988776422  22221111121 22 22566678888775    


Q ss_pred             --EEEEEcCCCc
Q psy7108         274 --VHIYSLDSGY  283 (703)
Q Consensus       274 --v~iwd~~~~~  283 (703)
                        |..||..+.+
T Consensus       491 ~~VE~ydp~~~~  502 (571)
T KOG4441|consen  491 SSVERYDPETNQ  502 (571)
T ss_pred             ceEEEEcCCCCc
Confidence              5567766544

>PRK10749 lysophospholipase L2; Provisional

Probab=91.69  E-value=0.3  Score=51.61  Aligned_cols=59  Identities=15%  Similarity=0.002  Sum_probs=44.6

Q ss_pred             eeeeeecchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccccc
Q psy7108         605 IFQVGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFL  667 (703)
Q Consensus       605 ~~e~~~~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~  667 (703)
                      +++++. |+.+.++.+....+..+++++|||+|+.++..++..+|+   .++.+++++|+...
T Consensus       110 ~~~~~~-d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~---~v~~lvl~~p~~~~  168 (330)
T PRK10749        110 FNDYVD-DLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPG---VFDAIALCAPMFGI  168 (330)
T ss_pred             HHHHHH-HHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCC---CcceEEEECchhcc
Confidence            444443 677777776555455789999999999999888888775   57889999997644

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=91.69  E-value=6.9  Score=44.44  Aligned_cols=113  Identities=13%  Similarity=0.250  Sum_probs=68.8

Q ss_pred             CeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCcee-EEEecCCCcEEEEEEe--cCCCEEEEEECCCeEEEEEcCC---
Q psy7108          49 PVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQ-HETIQLLSDALCVAYK--PDGTEIVVATLDGQLIMFDVES---  122 (703)
Q Consensus        49 ~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~-~~~~~~~~~V~~v~~s--pdg~~las~s~dg~I~vwd~~~---  122 (703)
                      ..+-+.-+.  -++.-+.-+...++.|||...+... ...+...+.|.++.|.  |||+.+++.|..+.|.++.-..   
T Consensus        31 ~~~li~gss--~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy  108 (631)
T PF12234_consen   31 NPSLISGSS--IKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDY  108 (631)
T ss_pred             CcceEeecc--cCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhh
Confidence            344444444  3333333333457899999777522 2233457889999985  6888888888999999985321   


Q ss_pred             ------CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEEC
Q psy7108         123 ------AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSS  182 (703)
Q Consensus       123 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~  182 (703)
                            ...+..+.-..                 -...+|.+.+|.++|..++.++  +.+.++|-
T Consensus       109 ~~~~p~w~~i~~i~i~~-----------------~T~h~Igds~Wl~~G~LvV~sG--Nqlfv~dk  155 (631)
T PF12234_consen  109 TNKGPSWAPIRKIDISS-----------------HTPHPIGDSIWLKDGTLVVGSG--NQLFVFDK  155 (631)
T ss_pred             hcCCcccceeEEEEeec-----------------CCCCCccceeEecCCeEEEEeC--CEEEEECC
Confidence                  11222222110                 0123788999999997665443  67888874

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated

Probab=91.66  E-value=0.2  Score=50.92  Aligned_cols=52  Identities=27%  Similarity=0.362  Sum_probs=41.8

Q ss_pred             cchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccc
Q psy7108         611 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF  666 (703)
Q Consensus       611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~  666 (703)
                      -|+-+.++++.+. +..+++.+|||+|+.+.+.+...+|.   .++.+++++|++.
T Consensus        84 ~Dv~~ai~~L~~~-~~~~v~LvG~SmGG~vAl~~A~~~p~---~v~~lVL~~P~~~  135 (266)
T TIGR03101        84 EDVAAAYRWLIEQ-GHPPVTLWGLRLGALLALDAANPLAA---KCNRLVLWQPVVS  135 (266)
T ss_pred             HHHHHHHHHHHhc-CCCCEEEEEECHHHHHHHHHHHhCcc---ccceEEEeccccc
Confidence            4666788887664 56789999999999999888777553   6788999999865

This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=91.62  E-value=16  Score=36.68  Aligned_cols=167  Identities=12%  Similarity=0.056  Sum_probs=97.9

Q ss_pred             eEEEecCCCc--EEEEEEecCCCEEEEEECCC--eEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEE
Q psy7108          84 QHETIQLLSD--ALCVAYKPDGTEIVVATLDG--QLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTV  159 (703)
Q Consensus        84 ~~~~~~~~~~--V~~v~~spdg~~las~s~dg--~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i  159 (703)
                      +.....|...  ...+.|..+|.++-+.+.-|  .|+.+|+.+++......-....                   .-..+
T Consensus        35 vv~~ypHd~~aFTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~-------------------FgEGi   95 (264)
T PF05096_consen   35 VVETYPHDPTAFTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRY-------------------FGEGI   95 (264)
T ss_dssp             EEEEEE--TT-EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT---------------------EEEE
T ss_pred             EEEECCCCCcccCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccc-------------------cceeE
Confidence            3444555544  34588877888888888766  6999999999987665544321                   12334


Q ss_pred             EEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC
Q psy7108         160 CYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK  239 (703)
Q Consensus       160 ~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~  239 (703)
                      +... ++...-.=.++...+||..+.+.+.++....    +|     ..++  .||+.++.+.+.+      .+.++|..
T Consensus        96 t~~~-d~l~qLTWk~~~~f~yd~~tl~~~~~~~y~~----EG-----WGLt--~dg~~Li~SDGS~------~L~~~dP~  157 (264)
T PF05096_consen   96 TILG-DKLYQLTWKEGTGFVYDPNTLKKIGTFPYPG----EG-----WGLT--SDGKRLIMSDGSS------RLYFLDPE  157 (264)
T ss_dssp             EEET-TEEEEEESSSSEEEEEETTTTEEEEEEE-SS----S-------EEE--ECSSCEEEE-SSS------EEEEE-TT
T ss_pred             EEEC-CEEEEEEecCCeEEEEccccceEEEEEecCC----cc-----eEEE--cCCCEEEEECCcc------ceEEECCc
Confidence            4332 3333444567889999999999988886432    22     2333  5677666655442      79999988


Q ss_pred             CCccceeecCC-----ccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecce
Q psy7108         240 KGDMAARVLKP-----EVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPF  288 (703)
Q Consensus       240 ~~~~~~~~~~h-----~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~  288 (703)
                      +.+....+.-.     -..++.+.|- +|...|=.=... |...|..+|++...+
T Consensus       158 ~f~~~~~i~V~~~g~pv~~LNELE~i-~G~IyANVW~td~I~~Idp~tG~V~~~i  211 (264)
T PF05096_consen  158 TFKEVRTIQVTDNGRPVSNLNELEYI-NGKIYANVWQTDRIVRIDPETGKVVGWI  211 (264)
T ss_dssp             T-SEEEEEE-EETTEE---EEEEEEE-TTEEEEEETTSSEEEEEETTT-BEEEEE
T ss_pred             ccceEEEEEEEECCEECCCcEeEEEE-cCEEEEEeCCCCeEEEEeCCCCeEEEEE
Confidence            77655544321     2346667775 555444333333 778888888775443

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>KOG1897|consensus

Probab=91.60  E-value=34  Score=40.32  Aligned_cols=251  Identities=12%  Similarity=0.059  Sum_probs=0.0

Q ss_pred             ccccceeeEEeeecccCCceEEecCC--ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcC
Q psy7108           2 TEFGNVSLIETRETHEGGNVVLKLPG--VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAV   79 (703)
Q Consensus         2 ~~~g~~~~~~~~~~~~~~~~~i~~~~--v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~   79 (703)
                      ...|...+.-..|...+...++++.+  .-++..++++.  -.--.-+..-..+.|+...-++.|+++.. +.+++.-++
T Consensus       625 ~~lGt~P~~Lr~f~sk~~t~vfa~sdrP~viY~~n~kLv--~spls~kev~~~c~f~s~a~~d~l~~~~~-~~l~i~tid  701 (1096)
T KOG1897|consen  625 VTLGTQPISLRTFSSKSRTAVFALSDRPTVIYSSNGKLV--YSPLSLKEVNHMCPFNSDAYPDSLASANG-GALTIGTID  701 (1096)
T ss_pred             cccCCCCcEEEEEeeCCceEEEEeCCCCEEEEecCCcEE--EeccchHHhhhhcccccccCCceEEEecC-CceEEEEec


Q ss_pred             CCcee-EEEecCCCcEEEEEEecCCCEEEEEECCCe--------------EEEEEcCCCcEEEEEeccccCCCCCCCCcc
Q psy7108          80 ETDTQ-HETIQLLSDALCVAYKPDGTEIVVATLDGQ--------------LIMFDVESAAQVGSVEARRDLDSGRLDTDL  144 (703)
Q Consensus        80 ~~~~~-~~~~~~~~~V~~v~~spdg~~las~s~dg~--------------I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~  144 (703)
                      .-++. .+..........+++.+....+++.+....              ++++|-++-+.+...+-...-..-      
T Consensus       702 ~iqkl~irtvpl~~~prrI~~q~~sl~~~v~s~r~e~~~~~~~ee~~~s~l~vlD~nTf~vl~~hef~~~E~~~------  775 (1096)
T KOG1897|consen  702 EIQKLHIRTVPLGESPRRICYQESSLTFGVLSNRIESSAEYYGEEYEVSFLRVLDQNTFEVLSSHEFERNETAL------  775 (1096)
T ss_pred             chhhcceeeecCCCChhheEecccceEEEEEecccccchhhcCCcceEEEEEEecCCceeEEeeccccccceee------


Q ss_pred             chhhcccCCccEEEEEEcCC-CCEEEEEe----------cCCcEEEEECCCCceEEEEEeccCCccccccccceeeeecc
Q psy7108         145 VTREQSLKAKAVSTVCYSAD-GSCILAAG----------QSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTE  213 (703)
Q Consensus       145 ~~~~~~~~~~~V~~i~~spd-g~~l~s~s----------~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp  213 (703)
                                .+.++.|..| +.++++|+          ..|.|.++.+..+..++...-+.-        .-...+...
T Consensus       776 ----------Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v--------~Gav~aL~~  837 (1096)
T KOG1897|consen  776 ----------SIISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETVV--------KGAVYALVE  837 (1096)
T ss_pred             ----------eeeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeeee--------ccceeehhh


Q ss_pred             CCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC---EEEEEcCCCceec
Q psy7108         214 FGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG---VHIYSLDSGYVFD  286 (703)
Q Consensus       214 dg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg---v~iwd~~~~~~~~  286 (703)
                      -...++++-..       .|++|+..+.+.++.-..+..++..+...-.|+.+++|.--+   +.-|+...|....
T Consensus       838 fngkllA~In~-------~vrLye~t~~~eLr~e~~~~~~~~aL~l~v~gdeI~VgDlm~Sitll~y~~~eg~f~e  906 (1096)
T KOG1897|consen  838 FNGKLLAGINQ-------SVRLYEWTTERELRIECNISNPIIALDLQVKGDEIAVGDLMRSITLLQYKGDEGNFEE  906 (1096)
T ss_pred             hCCeEEEecCc-------EEEEEEccccceehhhhcccCCeEEEEEEecCcEEEEeeccceEEEEEEeccCCceEE

>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2

Probab=91.53  E-value=0.19  Score=54.31  Aligned_cols=53  Identities=11%  Similarity=0.117  Sum_probs=44.0

Q ss_pred             cchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCc-h--HHHHHHHheecccc
Q psy7108         611 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRP-E--YQTKVRLNVLWAQS  664 (703)
Q Consensus       611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~-~--~~~~i~~~~~l~p~  664 (703)
                      -.|.+.|+.+.+.+ ..++.+||||||+.+...++...+ +  ..++|+.+|++||.
T Consensus       104 ~~lk~~ie~~~~~~-~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p  159 (389)
T PF02450_consen  104 TKLKQLIEEAYKKN-GKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTP  159 (389)
T ss_pred             HHHHHHHHHHHHhc-CCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCC
Confidence            34778899988888 668999999999999988888764 3  45789999999965

3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process

>PF13449 Phytase-like: Esterase-like activity of phytase

Probab=91.34  E-value=21  Score=37.49  Aligned_cols=169  Identities=13%  Similarity=0.128  Sum_probs=94.5

Q ss_pred             CcCeEEEEEcCCCCCCEEEEEeCCCc------EEEEEcCCC----cee-----EEEecCCC--------cEEEEEEecCC
Q psy7108          47 EGPVSCIEFSPVLSSTGMVSASWDKT------VKLWNAVET----DTQ-----HETIQLLS--------DALCVAYKPDG  103 (703)
Q Consensus        47 ~~~V~~l~~sp~~dg~~L~sgs~Dg~------V~iWd~~~~----~~~-----~~~~~~~~--------~V~~v~~spdg  103 (703)
                      -+.++++.+.|  ++..+++.|++|.      +...++...    ..+     ..+....+        ..-++++.++|
T Consensus        19 ~GGlSgl~~~~--~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g   96 (326)
T PF13449_consen   19 FGGLSGLDYDP--DDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPDG   96 (326)
T ss_pred             cCcEeeEEEeC--CCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecCC
Confidence            46788999997  6667777777777      554554331    011     11111111        34478887888


Q ss_pred             CEEEEEECC------CeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec----
Q psy7108         104 TEIVVATLD------GQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ----  173 (703)
Q Consensus       104 ~~las~s~d------g~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~----  173 (703)
                      .++++.-.+      ..|..++.+ |+....+.-...+......     .........+.+++++|||+.|+++..    
T Consensus        97 ~~~is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~-----~~~~~~N~G~E~la~~~dG~~l~~~~E~~l~  170 (326)
T PF13449_consen   97 SFWISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANG-----TSGRRNNRGFEGLAVSPDGRTLFAAMESPLK  170 (326)
T ss_pred             CEEEEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCc-----cccccCCCCeEEEEECCCCCEEEEEECcccc
Confidence            888777666      778888876 7666555332221100000     011223457999999999996665432    


Q ss_pred             -CC-----------cEEEEECCC-CceEEEEEeccCCcc-ccccccceeeeeccCCCEEEEEcc
Q psy7108         174 -SK-----------YICIYSSRE-GILLKKFTITQNKSL-DGINDFINRRKMTEFGNVSLIETR  223 (703)
Q Consensus       174 -dg-----------~I~lwD~~~-~~~~~~~~~~~~~~~-~~~~~~v~~~~~spdg~~l~~~~~  223 (703)
                       |+           .|..||..+ +.....+........ ......+..+.+-++++.++.--.
T Consensus       171 ~d~~~~~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLvLER~  234 (326)
T PF13449_consen  171 QDGPRANPDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLVLERD  234 (326)
T ss_pred             CCCcccccccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEEEEcc
Confidence             22           234455554 333444432221100 002346788899999997777544

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=91.33  E-value=30  Score=39.13  Aligned_cols=209  Identities=12%  Similarity=0.086  Sum_probs=110.5

Q ss_pred             CCcEEEEEcCCCceeEEEecCC-------------------------------CcEE-EEEEecCCCEEEEEECC-----
Q psy7108          70 DKTVKLWNAVETDTQHETIQLL-------------------------------SDAL-CVAYKPDGTEIVVATLD-----  112 (703)
Q Consensus        70 Dg~V~iWd~~~~~~~~~~~~~~-------------------------------~~V~-~v~~spdg~~las~s~d-----  112 (703)
                      +|.|..+|.++++.+.......                               ..+. .+++.|+..++..+..+     
T Consensus       180 ~G~v~AlD~~TG~~lW~~~~~p~~~~~~~~~~~~~~~~~~~~tw~~~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~  259 (527)
T TIGR03075       180 RGYVTAYDAKTGKLVWRRYTVPGDMGYLDKADKPVGGEPGAKTWPGDAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWN  259 (527)
T ss_pred             CcEEEEEECCCCceeEeccCcCCCcccccccccccccccccCCCCCCccccCCCCccCceeEcCCCCeEEEeCCCCCCCC
Confidence            6789999998887654432211                               1111 24666666666655421     


Q ss_pred             C-----------eEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCC---EEEEEecCCcEE
Q psy7108         113 G-----------QLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGS---CILAAGQSKYIC  178 (703)
Q Consensus       113 g-----------~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~---~l~s~s~dg~I~  178 (703)
                      +           .|.-.|++||+..-.++....        +.+-.  .. .....-+....+|+   .++.+.++|.+.
T Consensus       260 ~~~r~gdnl~~~s~vAld~~TG~~~W~~Q~~~~--------D~wD~--d~-~~~p~l~d~~~~G~~~~~v~~~~K~G~~~  328 (527)
T TIGR03075       260 SHLRPGDNLYTSSIVARDPDTGKIKWHYQTTPH--------DEWDY--DG-VNEMILFDLKKDGKPRKLLAHADRNGFFY  328 (527)
T ss_pred             CCCCCCCCccceeEEEEccccCCEEEeeeCCCC--------CCccc--cC-CCCcEEEEeccCCcEEEEEEEeCCCceEE
Confidence            1           577788889988766654221        00000  00 00112233335676   677899999999


Q ss_pred             EEECCCCceEEEEEecc--C----------Ccc-------------------ccccc--cceeeeeccCCCEEEEEcccC
Q psy7108         179 IYSSREGILLKKFTITQ--N----------KSL-------------------DGIND--FINRRKMTEFGNVSLIETRET  225 (703)
Q Consensus       179 lwD~~~~~~~~~~~~~~--~----------~~~-------------------~~~~~--~v~~~~~spdg~~l~~~~~~~  225 (703)
                      +.|-++|+.+.......  .          ...                   .+...  .-...+++|+...+++...+.
T Consensus       329 vlDr~tG~~i~~~~~~~~~~w~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~Pg~~Gg~~W~~~A~Dp~~g~~yvp~~~~  408 (527)
T TIGR03075       329 VLDRTNGKLLSAEPFVDTVNWATGVDLKTGRPIEVPEARSADGKKGKPVGVCPGFLGGKNWQPMAYSPKTGLFYVPANEV  408 (527)
T ss_pred             EEECCCCceeccccccCCcccccccCCCCCCCccChhhCcCCCCCCCeeEECCCCcCCCCCCCceECCCCCEEEEecccc
Confidence            99999998863211000  0          000                   00000  012256677766666554431


Q ss_pred             C---------------------------CCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEE
Q psy7108         226 H---------------------------EGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIY  277 (703)
Q Consensus       226 ~---------------------------~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iw  277 (703)
                      .                           ..-...+.-+|+.+++..-+.........+. ..-.+..++.++.+| ++.+
T Consensus       409 ~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~g~l~AiD~~tGk~~W~~~~~~p~~~~~-l~t~g~lvf~g~~~G~l~a~  487 (527)
T TIGR03075       409 CMDYEPEKVSYKKGAAYLGAGLTIKPPPDDHMGSLIAWDPITGKIVWEHKEDFPLWGGV-LATAGDLVFYGTLEGYFKAF  487 (527)
T ss_pred             cccccccccccCCCCceeccccccCCCCCCCceeEEEEeCCCCceeeEecCCCCCCCcc-eEECCcEEEEECCCCeEEEE
Confidence            0                           0011345566777776554443221111111 111445667777789 9999


Q ss_pred             EcCCCceecceee
Q psy7108         278 SLDSGYVFDPFLL  290 (703)
Q Consensus       278 d~~~~~~~~~~~~  290 (703)
                      |.++|+.+-.+..
T Consensus       488 D~~TGe~lw~~~~  500 (527)
T TIGR03075       488 DAKTGEELWKFKT  500 (527)
T ss_pred             ECCCCCEeEEEeC
Confidence            9999998765543

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>PLN02652 hydrolase; alpha/beta fold family protein

Probab=91.23  E-value=0.048  Score=59.01  Aligned_cols=55  Identities=27%  Similarity=0.265  Sum_probs=38.7

Q ss_pred             cCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108         528 LYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  583 (703)
Q Consensus       528 ~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~  583 (703)
                      ..|+.+.++++.......+++++|||+||..+..+. ..|++..+++..+..+|..
T Consensus       191 ~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a-~~p~~~~~v~glVL~sP~l  245 (395)
T PLN02652        191 VEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAA-SYPSIEDKLEGIVLTSPAL  245 (395)
T ss_pred             HHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHH-hccCcccccceEEEECccc
Confidence            457777888887654445899999999998765543 3455555677777777754

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=91.03  E-value=21  Score=36.91  Aligned_cols=152  Identities=11%  Similarity=0.092  Sum_probs=72.2

Q ss_pred             cCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEE
Q psy7108          89 QLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCI  168 (703)
Q Consensus        89 ~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l  168 (703)
                      ...+.+..+.-++||++++++.......-||--...-...-...                    ...|..+.|+|++...
T Consensus       142 ~~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~--------------------~~riq~~gf~~~~~lw  201 (302)
T PF14870_consen  142 ETSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNS--------------------SRRIQSMGFSPDGNLW  201 (302)
T ss_dssp             S----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--S--------------------SS-EEEEEE-TTS-EE
T ss_pred             CCcceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCc--------------------cceehhceecCCCCEE
Confidence            35567888999999999888865555667775422111111111                    2379999999998876


Q ss_pred             EEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCc---cce
Q psy7108         169 LAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGD---MAA  245 (703)
Q Consensus       169 ~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~---~~~  245 (703)
                      +.+ +.|.|+.=+...  ...++..+.. ........+..+++.+++...+++.+..       + +.....|+   ...
T Consensus       202 ~~~-~Gg~~~~s~~~~--~~~~w~~~~~-~~~~~~~~~ld~a~~~~~~~wa~gg~G~-------l-~~S~DgGktW~~~~  269 (302)
T PF14870_consen  202 MLA-RGGQIQFSDDPD--DGETWSEPII-PIKTNGYGILDLAYRPPNEIWAVGGSGT-------L-LVSTDGGKTWQKDR  269 (302)
T ss_dssp             EEE-TTTEEEEEE-TT--EEEEE---B--TTSS--S-EEEEEESSSS-EEEEESTT--------E-EEESSTTSS-EE-G
T ss_pred             EEe-CCcEEEEccCCC--CccccccccC-CcccCceeeEEEEecCCCCEEEEeCCcc-------E-EEeCCCCccceECc
Confidence            654 778888877221  2222221111 0111112367889999888777666541       2 11222332   222


Q ss_pred             eecCCccceEEEEEcCCCCEEEEEeCCC
Q psy7108         246 RVLKPEVRVFCVKFSPTGQAWVAATTEG  273 (703)
Q Consensus       246 ~~~~h~~~V~~l~~spdg~~l~s~s~Dg  273 (703)
                      ....-...+..+.|.++.+-++ .+.+|
T Consensus       270 ~~~~~~~n~~~i~f~~~~~gf~-lG~~G  296 (302)
T PF14870_consen  270 VGENVPSNLYRIVFVNPDKGFV-LGQDG  296 (302)
T ss_dssp             GGTTSSS---EEEEEETTEEEE-E-STT
T ss_pred             cccCCCCceEEEEEcCCCceEE-ECCCc
Confidence            2223345688888876655444 45577

>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase

Probab=91.01  E-value=0.1  Score=51.50  Aligned_cols=43  Identities=26%  Similarity=0.310  Sum_probs=28.1

Q ss_pred             HHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhh
Q psy7108         536 DYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQ  581 (703)
Q Consensus       536 ~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p  581 (703)
                      ..++..-+..++.++|||+||..++.+..+.|+   +++.++..+|
T Consensus        61 ~~~~~~~~~~~~~l~G~S~Gg~ia~~~a~~~~~---~v~~lil~~~  103 (251)
T TIGR03695        61 ATLLDQLGIEPFFLVGYSMGGRIALYYALQYPE---RVQGLILESG  103 (251)
T ss_pred             HHHHHHcCCCeEEEEEeccHHHHHHHHHHhCch---heeeeEEecC
Confidence            334444456789999999999988776666553   3444444443

This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.

>PLN02733 phosphatidylcholine-sterol O-acyltransferase

Probab=90.95  E-value=0.062  Score=58.53  Aligned_cols=53  Identities=17%  Similarity=0.215  Sum_probs=37.7

Q ss_pred             CCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCch-hhhhHHHhhhhhh
Q psy7108         529 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPE-YQTKVRLNVLWAQ  581 (703)
Q Consensus       529 ~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~-~~~~~~~~~~~~p  581 (703)
                      .++.+.++.+....+..++.++||||||..+...+...++ ....++.++++++
T Consensus       146 ~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p~~~~k~I~~~I~la~  199 (440)
T PLN02733        146 DGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHSDVFEKYVNSWIAIAA  199 (440)
T ss_pred             HHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCCHhHHhHhccEEEECC
Confidence            3555566666666667899999999999877665555564 4556777776654

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=90.90  E-value=11  Score=40.28  Aligned_cols=108  Identities=8%  Similarity=0.085  Sum_probs=55.2

Q ss_pred             CcEEEEEEecCCCEEEEEE-----------CCC-eEEEEEcCC--CcE--EEEEeccccCCCCCCCCccchhhcccCCcc
Q psy7108          92 SDALCVAYKPDGTEIVVAT-----------LDG-QLIMFDVES--AAQ--VGSVEARRDLDSGRLDTDLVTREQSLKAKA  155 (703)
Q Consensus        92 ~~V~~v~~spdg~~las~s-----------~dg-~I~vwd~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (703)
                      .....++|.++|+.+++-.           ..+ .|.+++-.+  |+.  ...+....                    ..
T Consensus        14 ~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l--------------------~~   73 (367)
T TIGR02604        14 RNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEEL--------------------SM   73 (367)
T ss_pred             CCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCC--------------------CC
Confidence            4567889999998776643           122 676665432  221  12222111                    13


Q ss_pred             EEEEEEcCCCCEEEEEecCCcEEEEECCCC-----ceEEEEEeccCCccccccccceeeeeccCCCEEEEEc
Q psy7108         156 VSTVCYSADGSCILAAGQSKYICIYSSREG-----ILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIET  222 (703)
Q Consensus       156 V~~i~~spdg~~l~s~s~dg~I~lwD~~~~-----~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~  222 (703)
                      ...+++.++|  |++++.+...++.|....     +....+..-.... .........+++.|||..++..+
T Consensus        74 p~Gi~~~~~G--lyV~~~~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~-~~~~~~~~~l~~gpDG~LYv~~G  142 (367)
T TIGR02604        74 VTGLAVAVGG--VYVATPPDILFLRDKDGDDKADGEREVLLSGFGGQI-NNHHHSLNSLAWGPDGWLYFNHG  142 (367)
T ss_pred             ccceeEecCC--EEEeCCCeEEEEeCCCCCCCCCCccEEEEEccCCCC-CcccccccCceECCCCCEEEecc
Confidence            5778899988  444444433334454321     1111111111100 00123467899999998776555

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function

Probab=90.82  E-value=0.25  Score=47.57  Aligned_cols=42  Identities=29%  Similarity=0.429  Sum_probs=34.2

Q ss_pred             eeeeecchHHHHHHHHhhCCC-CceEEEEeChhHHHHHHHhcC
Q psy7108         606 FQVGLYDTTATIDYILNQTGH-NSLITLGHSLGTTNVLIAGSL  647 (703)
Q Consensus       606 ~e~~~~d~pa~i~~i~~~t~~-~~~~~vg~s~g~~~~~~~~s~  647 (703)
                      .++++-|+-+.++|=++.-++ .-++++|||||++...-++.+
T Consensus        73 ~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e  115 (207)
T PF11288_consen   73 FDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKE  115 (207)
T ss_pred             HHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHH
Confidence            567888999888888876644 359999999999998887776

>PHA02857 monoglyceride lipase; Provisional

Probab=90.74  E-value=0.084  Score=54.04  Aligned_cols=53  Identities=21%  Similarity=0.224  Sum_probs=34.9

Q ss_pred             CCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhhh
Q psy7108         529 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF  584 (703)
Q Consensus       529 ~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~  584 (703)
                      .|+-..++++...-...++.++|||+||..+.....+.|+   .++.++..+|...
T Consensus        81 ~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~---~i~~lil~~p~~~  133 (276)
T PHA02857         81 RDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPN---LFTAMILMSPLVN  133 (276)
T ss_pred             HHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCcc---ccceEEEeccccc
Confidence            4555555665544344679999999999877665555544   4677777777543

>KOG4441|consensus

Probab=90.66  E-value=5.8  Score=45.17  Aligned_cols=187  Identities=10%  Similarity=0.108  Sum_probs=93.1

Q ss_pred             eEEEEEcCCCCCCEEEEEeCC-C-----cEEEEEcCCCceeEEEecCCCcEEEEE-EecCCCEEEEEECCCe-----EEE
Q psy7108          50 VSCIEFSPVLSSTGMVSASWD-K-----TVKLWNAVETDTQHETIQLLSDALCVA-YKPDGTEIVVATLDGQ-----LIM  117 (703)
Q Consensus        50 V~~l~~sp~~dg~~L~sgs~D-g-----~V~iWd~~~~~~~~~~~~~~~~V~~v~-~spdg~~las~s~dg~-----I~v  117 (703)
                      -.+++..   ++...++||.| |     ++..||..+.+- .........-...+ -.-+|...|+|+.||.     +-.
T Consensus       325 ~~~~~~~---~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W-~~~a~M~~~R~~~~v~~l~g~iYavGG~dg~~~l~svE~  400 (571)
T KOG4441|consen  325 RVGVAVL---NGKLYVVGGYDSGSDRLSSVERYDPRTNQW-TPVAPMNTKRSDFGVAVLDGKLYAVGGFDGEKSLNSVEC  400 (571)
T ss_pred             cccEEEE---CCEEEEEccccCCCcccceEEEecCCCCce-eccCCccCccccceeEEECCEEEEEeccccccccccEEE
Confidence            3445554   46888899888 3     455677666541 11111111111111 1226778888988864     566


Q ss_pred             EEcCCCcEE--EEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC------CcEEEEECCCCceEE
Q psy7108         118 FDVESAAQV--GSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS------KYICIYSSREGILLK  189 (703)
Q Consensus       118 wd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d------g~I~lwD~~~~~~~~  189 (703)
                      ||..+.+--  ..+...                    ...+-.+.  -+|+..++||.+      .++..||..+++...
T Consensus       401 YDp~~~~W~~va~m~~~--------------------r~~~gv~~--~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~  458 (571)
T KOG4441|consen  401 YDPVTNKWTPVAPMLTR--------------------RSGHGVAV--LGGKLYIIGGGDGSSNCLNSVECYDPETNTWTL  458 (571)
T ss_pred             ecCCCCcccccCCCCcc--------------------eeeeEEEE--ECCEEEEEcCcCCCccccceEEEEcCCCCceee
Confidence            666544321  111110                    01122222  257777777754      357889988876543


Q ss_pred             EEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcccee--ecCCccceEEEEEcCCCCEEE
Q psy7108         190 KFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAAR--VLKPEVRVFCVKFSPTGQAWV  267 (703)
Q Consensus       190 ~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~--~~~h~~~V~~l~~spdg~~l~  267 (703)
                      .-.....+        ...-...-++..+++++.++ .....++..+|..+.+-...  .......+..+.+  ++...+
T Consensus       459 ~~~M~~~R--------~~~g~a~~~~~iYvvGG~~~-~~~~~~VE~ydp~~~~W~~v~~m~~~rs~~g~~~~--~~~ly~  527 (571)
T KOG4441|consen  459 IAPMNTRR--------SGFGVAVLNGKIYVVGGFDG-TSALSSVERYDPETNQWTMVAPMTSPRSAVGVVVL--GGKLYA  527 (571)
T ss_pred             cCCccccc--------ccceEEEECCEEEEECCccC-CCccceEEEEcCCCCceeEcccCccccccccEEEE--CCEEEE
Confidence            32221111        11112334566677766665 33335688888876543222  2222222222222  455668


Q ss_pred             EEeCCC
Q psy7108         268 AATTEG  273 (703)
Q Consensus       268 s~s~Dg  273 (703)
                      +|+.||
T Consensus       528 vGG~~~  533 (571)
T KOG4441|consen  528 VGGFDG  533 (571)
T ss_pred             EecccC
Confidence            888776

>KOG4499|consensus

Probab=90.62  E-value=6.8  Score=38.12  Aligned_cols=142  Identities=10%  Similarity=0.097  Sum_probs=84.6

Q ss_pred             CcCeEEEEEcCCCCCCEEEEEeCC---------CcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEE-EECCCeEE
Q psy7108          47 EGPVSCIEFSPVLSSTGMVSASWD---------KTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVV-ATLDGQLI  116 (703)
Q Consensus        47 ~~~V~~l~~sp~~dg~~L~sgs~D---------g~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las-~s~dg~I~  116 (703)
                      ..+.+.-..+|  +|++++-.-.|         |.++.|-...  ++..+...-.--+.++|+.|.+.+.. -+.+-.|.
T Consensus       108 knR~NDgkvdP--~Gryy~GtMad~~~~le~~~g~Ly~~~~~h--~v~~i~~~v~IsNgl~Wd~d~K~fY~iDsln~~V~  183 (310)
T KOG4499|consen  108 KNRLNDGKVDP--DGRYYGGTMADFGDDLEPIGGELYSWLAGH--QVELIWNCVGISNGLAWDSDAKKFYYIDSLNYEVD  183 (310)
T ss_pred             hcccccCccCC--CCceeeeeeccccccccccccEEEEeccCC--CceeeehhccCCccccccccCcEEEEEccCceEEe
Confidence            44566677889  89885432222         3444554321  22223332223356899988877654 45567787


Q ss_pred             EEE--cCCCcEEE---EEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEE
Q psy7108         117 MFD--VESAAQVG---SVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKF  191 (703)
Q Consensus       117 vwd--~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~  191 (703)
                      -||  ..+|....   .+.-.+.    +          +...-.--.++...+|+..+++-..++|...|..+|+.+..+
T Consensus       184 a~dyd~~tG~~snr~~i~dlrk~----~----------~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~ei  249 (310)
T KOG4499|consen  184 AYDYDCPTGDLSNRKVIFDLRKS----Q----------PFESLEPDGMTIDTEGNLYVATFNGGTVQKVDPTTGKILLEI  249 (310)
T ss_pred             eeecCCCcccccCcceeEEeccC----C----------CcCCCCCCcceEccCCcEEEEEecCcEEEEECCCCCcEEEEE
Confidence            787  55554321   1111110    0          000001123445668888888888899999999999999999


Q ss_pred             EeccCCccccccccceeeeeccC
Q psy7108         192 TITQNKSLDGINDFINRRKMTEF  214 (703)
Q Consensus       192 ~~~~~~~~~~~~~~v~~~~~spd  214 (703)
                      ..+..        .+++++|-..
T Consensus       250 klPt~--------qitsccFgGk  264 (310)
T KOG4499|consen  250 KLPTP--------QITSCCFGGK  264 (310)
T ss_pred             EcCCC--------ceEEEEecCC
Confidence            87755        7888888644

>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins

Probab=90.62  E-value=0.25  Score=46.71  Aligned_cols=55  Identities=22%  Similarity=0.271  Sum_probs=46.2

Q ss_pred             cchHHHHHHHHhhCCCCceEEEEeChhHHH-HHHHhcCCchHHHHHHHheeccccc
Q psy7108         611 YDTTATIDYILNQTGHNSLITLGHSLGTTN-VLIAGSLRPEYQTKVRLNVLWAQSA  665 (703)
Q Consensus       611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~-~~~~~s~~~~~~~~i~~~~~l~p~~  665 (703)
                      -|+-.+|++-.++-+..++.+||+|+|..+ -|++.-..+....+|+.+++|+|..
T Consensus        52 ~Dl~~~i~~y~~~w~~~~vvLiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~  107 (192)
T PF06057_consen   52 ADLARIIRHYRARWGRKRVVLIGYSFGADVLPFIYNRLPAALRARVAQVVLLSPST  107 (192)
T ss_pred             HHHHHHHHHHHHHhCCceEEEEeecCCchhHHHHHhhCCHHHHhheeEEEEeccCC
Confidence            678889999999999999999999999965 5555555557889999999999875

VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].

>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]

Probab=90.53  E-value=6.7  Score=37.51  Aligned_cols=110  Identities=7%  Similarity=0.040  Sum_probs=64.0

Q ss_pred             CCCEEEEEeCC--CcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEE-EECCCeEEEEEcCCCcEEEEEeccccCC
Q psy7108          60 SSTGMVSASWD--KTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVV-ATLDGQLIMFDVESAAQVGSVEARRDLD  136 (703)
Q Consensus        60 dg~~L~sgs~D--g~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las-~s~dg~I~vwd~~~~~~~~~~~~~~~~~  136 (703)
                      +|.++.+.+.-  ..|++||+.+++......-....+..=....-|..+.. .=.+|.-..+|.++-+.+..+.-..   
T Consensus        55 ~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg~~~y~G---  131 (262)
T COG3823          55 DGHILESTGLYGFSKIRVSDLTTGQEIFSEKLAPDTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEELGRFSYEG---  131 (262)
T ss_pred             CCEEEEeccccccceeEEEeccCceEEEEeecCCccccccceeeccceEEEEEeccceeEEEChHHhhhhcccccCC---
Confidence            56667776644  36899999988655443222222222111122333322 2357888899998887776655432   


Q ss_pred             CCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEE
Q psy7108         137 SGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFT  192 (703)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~  192 (703)
                                        .=+.++  .|++.|+.+....+++.-|.++.....+..
T Consensus       132 ------------------eGWgLt--~d~~~LimsdGsatL~frdP~tfa~~~~v~  167 (262)
T COG3823         132 ------------------EGWGLT--SDDKNLIMSDGSATLQFRDPKTFAELDTVQ  167 (262)
T ss_pred             ------------------cceeee--cCCcceEeeCCceEEEecCHHHhhhcceEE
Confidence                              234444  455667777666778888887765555444

>KOG2280|consensus

Probab=90.52  E-value=14  Score=41.94  Aligned_cols=160  Identities=16%  Similarity=0.240  Sum_probs=86.9

Q ss_pred             CCceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEe---cCCCcEEEEEEecC
Q psy7108          26 PGVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETI---QLLSDALCVAYKPD  102 (703)
Q Consensus        26 ~~v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~---~~~~~V~~v~~spd  102 (703)
                      |.+++++.+|+++  ..+.-..+++-.+.|+.   ...|+....||+++++++..........   .....|..+.+..+
T Consensus        64 ~~I~If~~sG~lL--~~~~w~~~~lI~mgWs~---~eeLI~v~k~g~v~Vy~~~ge~ie~~svg~e~~~~~I~ec~~f~~  138 (829)
T KOG2280|consen   64 PYIRIFNISGQLL--GRILWKHGELIGMGWSD---DEELICVQKDGTVHVYGLLGEFIESNSVGFESQMSDIVECRFFHN  138 (829)
T ss_pred             eeEEEEeccccch--HHHHhcCCCeeeecccC---CceEEEEeccceEEEeecchhhhcccccccccccCceeEEEEecC
Confidence            4477888999998  65554445888999995   5667777899999999985432111111   12233555555545


Q ss_pred             CCEEEEEECCCeEEEEE-cCCC---------------cEEEEEeccccCCC--------CC--CCC--ccc-hhhcccCC
Q psy7108         103 GTEIVVATLDGQLIMFD-VESA---------------AQVGSVEARRDLDS--------GR--LDT--DLV-TREQSLKA  153 (703)
Q Consensus       103 g~~las~s~dg~I~vwd-~~~~---------------~~~~~~~~~~~~~~--------~~--~~~--~~~-~~~~~~~~  153 (703)
                      |-.+.+  .+|.+.+-. ....               .+-..+..+.....        +.  .+.  +.. ........
T Consensus       139 GVavlt--~~g~v~~i~~~~~~~~~~~~diP~~~~~~~~Wt~~~~~~~~~~ll~v~~~v~~~~~q~~~~~~q~~~~~~~~  216 (829)
T KOG2280|consen  139 GVAVLT--VSGQVILINGVEEPKLRKMPDIPYNELPKSCWTVFQPHRQSTILLDVDVAVGLHICQVEESRVQLHALSWPN  216 (829)
T ss_pred             ceEEEe--cCCcEEEEcCCCcchhhhCCCCCCccCCCcceeEecCCCcceeEEeechhhhhcccceecccccccccCCCC
Confidence            533333  344443322 1110               00011111100000        00  000  000 00011112


Q ss_pred             ccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEE
Q psy7108         154 KAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFT  192 (703)
Q Consensus       154 ~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~  192 (703)
                      ..+..+..||+.++|+--..+|.|.+-+....++...+.
T Consensus       217 ~~~~ki~VS~n~~~laLyt~~G~i~~vs~D~~~~lce~~  255 (829)
T KOG2280|consen  217 SSVVKISVSPNRRFLALYTETGKIWVVSIDLSQILCEFN  255 (829)
T ss_pred             ceEEEEEEcCCcceEEEEecCCcEEEEecchhhhhhccC
Confidence            467788899999999988889999998888777766655

>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A

Probab=90.50  E-value=0.21  Score=48.49  Aligned_cols=50  Identities=26%  Similarity=0.370  Sum_probs=39.8

Q ss_pred             HHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccccC
Q psy7108         616 TIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLG  668 (703)
Q Consensus       616 ~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~~  668 (703)
                      .+..+++..+.++++.+|||+|+.++..++..+|+   +|+.+++++|.....
T Consensus        55 ~l~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~---~v~~~vl~~~~~~~~  104 (228)
T PF12697_consen   55 DLAELLDALGIKKVILVGHSMGGMIALRLAARYPD---RVKGLVLLSPPPPLP  104 (228)
T ss_dssp             HHHHHHHHTTTSSEEEEEETHHHHHHHHHHHHSGG---GEEEEEEESESSSHH
T ss_pred             hhhhccccccccccccccccccccccccccccccc---ccccceeeccccccc
Confidence            34445566666789999999999999999988776   788889999888543

...

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=90.31  E-value=9.9  Score=43.21  Aligned_cols=114  Identities=15%  Similarity=0.150  Sum_probs=70.8

Q ss_pred             cEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEc--CCCCEEEE
Q psy7108          93 DALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYS--ADGSCILA  170 (703)
Q Consensus        93 ~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~s--pdg~~l~s  170 (703)
                      .+.-+.-|.-++..++-+...++.|||.+.+.....-.-                   ...+.|.++.|.  |||+.+++
T Consensus        31 ~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f-------------------~~~~~I~dLDWtst~d~qsiLa   91 (631)
T PF12234_consen   31 NPSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESF-------------------SEDDPIRDLDWTSTPDGQSILA   91 (631)
T ss_pred             CcceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeee-------------------cCCCceeeceeeecCCCCEEEE
Confidence            344454555455444544456799999988763221111                   013378899885  68999999


Q ss_pred             EecCCcEEEEECC---------CCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCC
Q psy7108         171 AGQSKYICIYSSR---------EGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGV  238 (703)
Q Consensus       171 ~s~dg~I~lwD~~---------~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~  238 (703)
                      .|-.+.|.+|--.         +...++.+.....   .  ..+|....|.++|..++.++.        .+.++|-
T Consensus        92 VGf~~~v~l~~Q~R~dy~~~~p~w~~i~~i~i~~~---T--~h~Igds~Wl~~G~LvV~sGN--------qlfv~dk  155 (631)
T PF12234_consen   92 VGFPHHVLLYTQLRYDYTNKGPSWAPIRKIDISSH---T--PHPIGDSIWLKDGTLVVGSGN--------QLFVFDK  155 (631)
T ss_pred             EEcCcEEEEEEccchhhhcCCcccceeEEEEeecC---C--CCCccceeEecCCeEEEEeCC--------EEEEECC
Confidence            9988999998542         1233444433221   1  136788899999987766553        5777763

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>PF13449 Phytase-like: Esterase-like activity of phytase

Probab=90.29  E-value=14  Score=38.91  Aligned_cols=170  Identities=14%  Similarity=0.161  Sum_probs=94.6

Q ss_pred             CCcEEEEEEecCCCEEEEEECCCe------EEEEEcCC--C--cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEE
Q psy7108          91 LSDALCVAYKPDGTEIVVATLDGQ------LIMFDVES--A--AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVC  160 (703)
Q Consensus        91 ~~~V~~v~~spdg~~las~s~dg~------I~vwd~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~  160 (703)
                      -+....+.+.|++..+++.+.+|.      +...++..  +  ..+....... +..  ......    ....--..+++
T Consensus        19 ~GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-L~~--~~G~~~----~~~~~D~Egi~   91 (326)
T PF13449_consen   19 FGGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIP-LRD--PDGQPF----PKNGLDPEGIA   91 (326)
T ss_pred             cCcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEecccee-ccC--CCCCcC----CcCCCChhHeE
Confidence            356788899876666777777777      65555543  1  1111111000 000  000000    00111345778


Q ss_pred             EcCCCCEEEEEecC------CcEEEEECCCCceEEEEEeccCC-------ccccccccceeeeeccCCCEEEEEcccCC-
Q psy7108         161 YSADGSCILAAGQS------KYICIYSSREGILLKKFTITQNK-------SLDGINDFINRRKMTEFGNVSLIETRETH-  226 (703)
Q Consensus       161 ~spdg~~l~s~s~d------g~I~lwD~~~~~~~~~~~~~~~~-------~~~~~~~~v~~~~~spdg~~l~~~~~~~~-  226 (703)
                      +.++|.++++.-.+      ..|..+|.. |+....+..+...       .-...+..+..++++|+|+.+++.....- 
T Consensus        92 ~~~~g~~~is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E~~l~  170 (326)
T PF13449_consen   92 VPPDGSFWISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAMESPLK  170 (326)
T ss_pred             EecCCCEEEEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEECcccc
Confidence            87888888887667      789999977 7777766544432       11223456788999999996666543321 


Q ss_pred             -CCC--------eeEEECCCCCC-Ccc----ceeecC-----CccceEEEEEcCCCCEEEE
Q psy7108         227 -EGG--------NVVLKLPGVKK-GDM----AARVLK-----PEVRVFCVKFSPTGQAWVA  268 (703)
Q Consensus       227 -~~~--------~~~i~iwd~~~-~~~----~~~~~~-----h~~~V~~l~~spdg~~l~s  268 (703)
                       ++.        ...+..+|..+ ++.    ...+..     ....+..+.+-+++++|+.
T Consensus       171 ~d~~~~~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLvL  231 (326)
T PF13449_consen  171 QDGPRANPDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLVL  231 (326)
T ss_pred             CCCcccccccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEEE
Confidence             111        13445556654 322    222222     3567888999999987654

>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily

Probab=90.15  E-value=0.13  Score=52.37  Aligned_cols=33  Identities=18%  Similarity=0.176  Sum_probs=22.8

Q ss_pred             HHhHccCCCcceEEEEEecCceeeeeccCCCch
Q psy7108         536 DYILNQTGHNSLITLGHSLGTTNVLIAGSLRPE  568 (703)
Q Consensus       536 ~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~  568 (703)
                      ..+++.-+..++.++|||+||..+..++.+.|+
T Consensus        87 ~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~  119 (288)
T TIGR01250        87 EEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQ  119 (288)
T ss_pred             HHHHHHcCCCcEEEEEeehHHHHHHHHHHhCcc
Confidence            334444455679999999999877766665543

This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase

>PLN02652 hydrolase; alpha/beta fold family protein

Probab=90.07  E-value=0.31  Score=52.77  Aligned_cols=57  Identities=26%  Similarity=0.231  Sum_probs=45.4

Q ss_pred             cchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccccC
Q psy7108         611 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLG  668 (703)
Q Consensus       611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~~  668 (703)
                      .|+.+.++++.......+++.+|||+|+.+...++ .+|+...+++.+++.+|...+.
T Consensus       192 ~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a-~~p~~~~~v~glVL~sP~l~~~  248 (395)
T PLN02652        192 EDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAA-SYPSIEDKLEGIVLTSPALRVK  248 (395)
T ss_pred             HHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHH-hccCcccccceEEEECcccccc
Confidence            57888999988765555799999999999987655 4576666889999999987554

>PRK10115 protease 2; Provisional

Probab=90.04  E-value=16  Score=42.71  Aligned_cols=57  Identities=18%  Similarity=0.062  Sum_probs=43.7

Q ss_pred             eeecchHHHHHHHHhh--CCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccccc
Q psy7108         608 VGLYDTTATIDYILNQ--TGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFL  667 (703)
Q Consensus       608 ~~~~d~pa~i~~i~~~--t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~  667 (703)
                      -..-|+-|.++++.+.  +...+|...|-|.||....+++..+|+   ..+..|+..|+.-+
T Consensus       503 ~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pd---lf~A~v~~vp~~D~  561 (686)
T PRK10115        503 NTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPE---LFHGVIAQVPFVDV  561 (686)
T ss_pred             CcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChh---heeEEEecCCchhH
Confidence            3456888999998875  446789999999999999888888776   35566666666644

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=90.03  E-value=11  Score=40.41  Aligned_cols=147  Identities=13%  Similarity=0.161  Sum_probs=75.2

Q ss_pred             CeEEEEEcCCCCCCEEEEEe-----------CCC-cEEEEEcCCC-ce---eEEEecCCCcEEEEEEecCCCEEEEEECC
Q psy7108          49 PVSCIEFSPVLSSTGMVSAS-----------WDK-TVKLWNAVET-DT---QHETIQLLSDALCVAYKPDGTEIVVATLD  112 (703)
Q Consensus        49 ~V~~l~~sp~~dg~~L~sgs-----------~Dg-~V~iWd~~~~-~~---~~~~~~~~~~V~~v~~spdg~~las~s~d  112 (703)
                      ...+++|.+  +|+++++-.           ..+ .|.+++-.++ .+   ...+...-.....+++.++| . ++++..
T Consensus        15 ~P~~ia~d~--~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G-l-yV~~~~   90 (367)
T TIGR02604        15 NPIAVCFDE--RGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG-V-YVATPP   90 (367)
T ss_pred             CCceeeECC--CCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC-E-EEeCCC
Confidence            456789999  898877753           223 5666653322 11   12233334456889999988 4 444444


Q ss_pred             CeEEEE-EcCCC-----cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC------------
Q psy7108         113 GQLIMF-DVESA-----AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS------------  174 (703)
Q Consensus       113 g~I~vw-d~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d------------  174 (703)
                       .|..+ |.+..     +....+.+-..             ....+......++|.|||.+.++.+..            
T Consensus        91 -~i~~~~d~~gdg~ad~~~~~l~~~~~~-------------~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~  156 (367)
T TIGR02604        91 -DILFLRDKDGDDKADGEREVLLSGFGG-------------QINNHHHSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSD  156 (367)
T ss_pred             -eEEEEeCCCCCCCCCCccEEEEEccCC-------------CCCcccccccCceECCCCCEEEecccCCCceeccCCCcc
Confidence             44434 54321     11111111100             000012246789999999876654421            


Q ss_pred             -------CcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEc
Q psy7108         175 -------KYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIET  222 (703)
Q Consensus       175 -------g~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~  222 (703)
                             +.|.-+|..+++. ..+. .      ++ .....++|+++|+.+++..
T Consensus       157 ~~~~~~~g~i~r~~pdg~~~-e~~a-~------G~-rnp~Gl~~d~~G~l~~tdn  202 (367)
T TIGR02604       157 ESRQGLGGGLFRYNPDGGKL-RVVA-H------GF-QNPYGHSVDSWGDVFFCDN  202 (367)
T ss_pred             CcccccCceEEEEecCCCeE-EEEe-c------Cc-CCCccceECCCCCEEEEcc
Confidence                   3344555544332 1221 1      11 1345689999998876544

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=89.77  E-value=4.4  Score=47.18  Aligned_cols=91  Identities=11%  Similarity=0.230  Sum_probs=52.6

Q ss_pred             cEEEEEEecCCCEEEEEECCCeEEEEEcCC-CcEEEEEeccc-cCCCCCCCCccchhhcccCCccEEEEEEcCC---CCE
Q psy7108          93 DALCVAYKPDGTEIVVATLDGQLIMFDVES-AAQVGSVEARR-DLDSGRLDTDLVTREQSLKAKAVSTVCYSAD---GSC  167 (703)
Q Consensus        93 ~V~~v~~spdg~~las~s~dg~I~vwd~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd---g~~  167 (703)
                      .|..+.++|+|+.+|..|..| |.|..+.. ......+++.. .+.+.....+. ..-...+...|..+.|+|.   +..
T Consensus        86 ~v~~i~~n~~g~~lal~G~~~-v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~-~~~~~~~~~~i~qv~WhP~s~~~~~  163 (717)
T PF10168_consen   86 EVHQISLNPTGSLLALVGPRG-VVVLELPRRWGKNGEFEDGKKEINCRTVPVDE-RFFTSNSSLEIKQVRWHPWSESDSH  163 (717)
T ss_pred             eEEEEEECCCCCEEEEEcCCc-EEEEEeccccCccccccCCCcceeEEEEEech-hhccCCCCceEEEEEEcCCCCCCCe
Confidence            578899999999999988755 55544421 10001111000 00000000000 0001223457899999996   588


Q ss_pred             EEEEecCCcEEEEECCCC
Q psy7108         168 ILAAGQSKYICIYSSREG  185 (703)
Q Consensus       168 l~s~s~dg~I~lwD~~~~  185 (703)
                      |++-+.|+++++||+...
T Consensus       164 l~vLtsdn~lR~y~~~~~  181 (717)
T PF10168_consen  164 LVVLTSDNTLRLYDISDP  181 (717)
T ss_pred             EEEEecCCEEEEEecCCC
Confidence            999999999999999763

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>TIGR00976 /NonD putative hydrolase, CocE/NonD family

Probab=89.67  E-value=0.21  Score=56.78  Aligned_cols=49  Identities=24%  Similarity=0.232  Sum_probs=35.2

Q ss_pred             cCCchhhHHHhHccCC-CcceEEEEEecCceeeeeccCCCchhhhhHHHhhhh
Q psy7108         528 LYDTTATIDYILNQTG-HNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLW  579 (703)
Q Consensus       528 ~~d~~~~~~~i~~~~~-~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~  579 (703)
                      ..|+.++++|+...+. ..+++++|||+||+.+|++..+.|.   +++..+..
T Consensus        79 ~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~---~l~aiv~~  128 (550)
T TIGR00976        79 AADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPP---ALRAIAPQ  128 (550)
T ss_pred             chHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCC---ceeEEeec
Confidence            4577889999987642 3599999999999888877665442   44444443

This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.

>KOG2444|consensus

Probab=89.67  E-value=0.91  Score=43.86  Aligned_cols=87  Identities=11%  Similarity=-0.025  Sum_probs=52.9

Q ss_pred             cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCC-CcEEEEEEecCCCEEEEE--
Q psy7108          33 MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLL-SDALCVAYKPDGTEIVVA--  109 (703)
Q Consensus        33 ~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~-~~V~~v~~spdg~~las~--  109 (703)
                      ..|...  .....-...|-++--.-. ++.+..+++.||.||.|++.-.+.+...-.|. .++.....+..++.++.+  
T Consensus        89 ~~g~~~--d~~~s~~e~i~~~Ip~~~-~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~  165 (238)
T KOG2444|consen   89 LEGAHS--DRVCSGEESIDLGIPNGR-DSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGEELIVVGSDEFLKIADT  165 (238)
T ss_pred             ccchHH--Hhhhcccccceecccccc-ccceeEEeccCCceeeeccccCceeeeeccccCCCcceeEEecCCceEEeecc
Confidence            344443  333333444444332221 55688899999999999998776665555666 455555555555666666  


Q ss_pred             ECCCeEEEEEcCC
Q psy7108         110 TLDGQLIMFDVES  122 (703)
Q Consensus       110 s~dg~I~vwd~~~  122 (703)
                      |.|..++.|++..
T Consensus       166 S~d~~~k~W~ve~  178 (238)
T KOG2444|consen  166 SHDRVLKKWNVEK  178 (238)
T ss_pred             ccchhhhhcchhh
Confidence            6666666676653

>KOG1455|consensus

Probab=89.65  E-value=0.42  Score=48.26  Aligned_cols=88  Identities=18%  Similarity=0.261  Sum_probs=52.2

Q ss_pred             cchHHHHHHHHhhCCCC--ceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccccCCCCChh-----hHHHHHHhh
Q psy7108         611 YDTTATIDYILNQTGHN--SLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLGNLVTRD-----MLEGLYGIY  683 (703)
Q Consensus       611 ~d~pa~i~~i~~~t~~~--~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~~~~~~~~-----~~~~~~~~~  683 (703)
                      -|+-+..+.+..+...+  -.++.||||||++.+.+...+|..   ...+++.||+.....-.-|.     .+..+-.++
T Consensus       111 ~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~---w~G~ilvaPmc~i~~~~kp~p~v~~~l~~l~~li  187 (313)
T KOG1455|consen  111 DDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNF---WDGAILVAPMCKISEDTKPHPPVISILTLLSKLI  187 (313)
T ss_pred             HHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcc---cccceeeecccccCCccCCCcHHHHHHHHHHHhC
Confidence            34556677666654322  268999999999999888877864   34566777777655432221     111223444


Q ss_pred             ccccccchh-HhhhhhcCC
Q psy7108         684 AEYQTISGY-FIKLALKTP  701 (703)
Q Consensus       684 ~~~~~~~~~-~~~~~~~~~  701 (703)
                      ......|.. .+..+.|+|
T Consensus       188 P~wk~vp~~d~~~~~~kdp  206 (313)
T KOG1455|consen  188 PTWKIVPTKDIIDVAFKDP  206 (313)
T ss_pred             CceeecCCccccccccCCH
Confidence            555556665 344444444

>PRK05077 frsA fermentation/respiration switch protein; Reviewed

Probab=89.64  E-value=0.13  Score=56.01  Aligned_cols=49  Identities=14%  Similarity=0.287  Sum_probs=35.3

Q ss_pred             hhhHHHhHccC--CCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108         532 TATIDYILNQT--GHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  583 (703)
Q Consensus       532 ~~~~~~i~~~~--~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~  583 (703)
                      .+.++|+...+  +.++++++|||+||+.++.+....|   ++++..+..+|+.
T Consensus       250 ~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p---~ri~a~V~~~~~~  300 (414)
T PRK05077        250 QAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEP---PRLKAVACLGPVV  300 (414)
T ss_pred             HHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCC---cCceEEEEECCcc
Confidence            35778888775  4579999999999998776554433   3567777777653

>KOG2280|consensus

Probab=89.55  E-value=13  Score=42.39  Aligned_cols=185  Identities=12%  Similarity=0.154  Sum_probs=89.0

Q ss_pred             cEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEe-ccccCCCCCCCCccchhhcc
Q psy7108          72 TVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVE-ARRDLDSGRLDTDLVTREQS  150 (703)
Q Consensus        72 ~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  150 (703)
                      .|+|++. +|.......-..+.+-.+.|+.+.. |++...+|++++|++-. +.+.... +...                
T Consensus        65 ~I~If~~-sG~lL~~~~w~~~~lI~mgWs~~ee-LI~v~k~g~v~Vy~~~g-e~ie~~svg~e~----------------  125 (829)
T KOG2280|consen   65 YIRIFNI-SGQLLGRILWKHGELIGMGWSDDEE-LICVQKDGTVHVYGLLG-EFIESNSVGFES----------------  125 (829)
T ss_pred             eEEEEec-cccchHHHHhcCCCeeeecccCCce-EEEEeccceEEEeecch-hhhccccccccc----------------
Confidence            5778886 4434444443444889999997654 55667999999999853 2222210 0000                


Q ss_pred             cCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCC--EEEEEcccCCCC
Q psy7108         151 LKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGN--VSLIETRETHEG  228 (703)
Q Consensus       151 ~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~--~l~~~~~~~~~~  228 (703)
                       ....|..+.+..+|-.+++  .+|.+.+-.-......+++..-+.     ....-++....+++.  .++..-... . 
T Consensus       126 -~~~~I~ec~~f~~GVavlt--~~g~v~~i~~~~~~~~~~~~diP~-----~~~~~~~Wt~~~~~~~~~~ll~v~~~-v-  195 (829)
T KOG2280|consen  126 -QMSDIVECRFFHNGVAVLT--VSGQVILINGVEEPKLRKMPDIPY-----NELPKSCWTVFQPHRQSTILLDVDVA-V-  195 (829)
T ss_pred             -ccCceeEEEEecCceEEEe--cCCcEEEEcCCCcchhhhCCCCCC-----ccCCCcceeEecCCCcceeEEeechh-h-
Confidence             0113444455445643333  345544433222212222221111     111112222222222  111111000 0 


Q ss_pred             CeeEEECCCCCCC-ccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecce
Q psy7108         229 GNVVLKLPGVKKG-DMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPF  288 (703)
Q Consensus       229 ~~~~i~iwd~~~~-~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~  288 (703)
                         -..+...... .....+......+..+..||+.++|+--...| +.+-+.+..+.+..+
T Consensus       196 ---~~~~~q~~~~~~q~~~~~~~~~~~~ki~VS~n~~~laLyt~~G~i~~vs~D~~~~lce~  254 (829)
T KOG2280|consen  196 ---GLHICQVEESRVQLHALSWPNSSVVKISVSPNRRFLALYTETGKIWVVSIDLSQILCEF  254 (829)
T ss_pred             ---hhcccceecccccccccCCCCceEEEEEEcCCcceEEEEecCCcEEEEecchhhhhhcc
Confidence               0111111111 11222233346788899999999999988888 888777766554433

>PLN02517 phosphatidylcholine-sterol O-acyltransferase

Probab=89.45  E-value=0.57  Score=51.93  Aligned_cols=53  Identities=13%  Similarity=0.233  Sum_probs=43.6

Q ss_pred             chHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCC-----------ch-HHHHHHHheecccc
Q psy7108         612 DTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLR-----------PE-YQTKVRLNVLWAQS  664 (703)
Q Consensus       612 d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~-----------~~-~~~~i~~~~~l~p~  664 (703)
                      .|...|+.+...++.+|+.+||||+|+.+.+-++..-           ++ ..+.|+.+|.+||.
T Consensus       198 rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp  262 (642)
T PLN02517        198 RLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGP  262 (642)
T ss_pred             HHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheecccc
Confidence            4888999999988888999999999999988777521           33 44789999999975

>PLN02298 hydrolase, alpha/beta fold family protein

Probab=89.45  E-value=0.37  Score=50.85  Aligned_cols=54  Identities=19%  Similarity=0.148  Sum_probs=42.7

Q ss_pred             cchHHHHHHHHhhC--CCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccccc
Q psy7108         611 YDTTATIDYILNQT--GHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFL  667 (703)
Q Consensus       611 ~d~pa~i~~i~~~t--~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~  667 (703)
                      -|+.++++++....  ...+++++|||+|+.++..+...+|+   .++.+++++|....
T Consensus       116 ~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~---~v~~lvl~~~~~~~  171 (330)
T PLN02298        116 EDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPE---GFDGAVLVAPMCKI  171 (330)
T ss_pred             HHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcc---cceeEEEecccccC
Confidence            67888999887643  22368999999999999888887775   58889999987654

>KOG1552|consensus

Probab=89.37  E-value=0.33  Score=47.94  Aligned_cols=51  Identities=25%  Similarity=0.350  Sum_probs=44.2

Q ss_pred             ecchHHHHHHHHhhCC-CCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccc
Q psy7108         610 LYDTTATIDYILNQTG-HNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  665 (703)
Q Consensus       610 ~~d~pa~i~~i~~~t~-~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~  665 (703)
                      ++|+.|..+++++..| .+++...|+|+|+....-++++.|     +..+|+.+|+.
T Consensus       112 y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~-----~~alVL~SPf~  163 (258)
T KOG1552|consen  112 YADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP-----LAAVVLHSPFT  163 (258)
T ss_pred             hhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC-----cceEEEeccch
Confidence            5899999999999995 788999999999999888888877     56777777775

>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins

Probab=89.33  E-value=40  Score=37.53  Aligned_cols=157  Identities=12%  Similarity=0.080  Sum_probs=76.8

Q ss_pred             eeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCc----EEEEEEecCCCE
Q psy7108          30 KGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSD----ALCVAYKPDGTE  105 (703)
Q Consensus        30 ~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~----V~~v~~spdg~~  105 (703)
                      ..|.+|.+.  ..+..-......+...+  +|.+++..+  +.++..|+. |+.... ......    =..+..-|+|++
T Consensus       132 ~iD~~G~Vr--w~~~~~~~~~~~~~~l~--nG~ll~~~~--~~~~e~D~~-G~v~~~-~~l~~~~~~~HHD~~~l~nGn~  203 (477)
T PF05935_consen  132 LIDNNGDVR--WYLPLDSGSDNSFKQLP--NGNLLIGSG--NRLYEIDLL-GKVIWE-YDLPGGYYDFHHDIDELPNGNL  203 (477)
T ss_dssp             EEETTS-EE--EEE-GGGT--SSEEE-T--TS-EEEEEB--TEEEEE-TT---EEEE-EE--TTEE-B-S-EEE-TTS-E
T ss_pred             EECCCccEE--EEEccCccccceeeEcC--CCCEEEecC--CceEEEcCC-CCEEEe-eecCCcccccccccEECCCCCE
Confidence            346677665  43332222111156677  888887665  677888874 333222 332222    245778899999


Q ss_pred             EEEEEC-------------CCeEEEEEcCCCcEEEEEeccccCCCCCCCCccc----hh-hcccCC--ccEEEEEEcCCC
Q psy7108         106 IVVATL-------------DGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLV----TR-EQSLKA--KAVSTVCYSADG  165 (703)
Q Consensus       106 las~s~-------------dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~--~~V~~i~~spdg  165 (703)
                      |+.+..             ...|..+| .+|+.+..+.....+...+......    .. ......  -.+.++.+.+..
T Consensus       204 L~l~~~~~~~~~~~~~~~~~D~Ivevd-~tG~vv~~wd~~d~ld~~~~~~~~~~~~~~~~~~~~~~DW~H~Nsi~yd~~d  282 (477)
T PF05935_consen  204 LILASETKYVDEDKDVDTVEDVIVEVD-PTGEVVWEWDFFDHLDPYRDTVLKPYPYGDISGSGGGRDWLHINSIDYDPSD  282 (477)
T ss_dssp             EEEEEETTEE-TS-EE---S-EEEEE--TTS-EEEEEEGGGTS-TT--TTGGT--SSSSS-SSTTSBS--EEEEEEETTT
T ss_pred             EEEEeecccccCCCCccEecCEEEEEC-CCCCEEEEEehHHhCCcccccccccccccccccCCCCCCccccCccEEeCCC
Confidence            887772             23477888 8999998887665443222100000    00 000011  148899999955


Q ss_pred             CEEEEEecC-CcEEEEECCCCceEEEEEecc
Q psy7108         166 SCILAAGQS-KYICIYSSREGILLKKFTITQ  195 (703)
Q Consensus       166 ~~l~s~s~d-g~I~lwD~~~~~~~~~~~~~~  195 (703)
                      ..|+..++. ..|...|.++++..-.+..+.
T Consensus       283 d~iivSsR~~s~V~~Id~~t~~i~Wilg~~~  313 (477)
T PF05935_consen  283 DSIIVSSRHQSAVIKIDYRTGKIKWILGPPG  313 (477)
T ss_dssp             TEEEEEETTT-EEEEEE-TTS-EEEEES-ST
T ss_pred             CeEEEEcCcceEEEEEECCCCcEEEEeCCCC
Confidence            555555554 479999988888776665443

Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.

>PRK00870 haloalkane dehalogenase; Provisional

Probab=89.29  E-value=0.52  Score=48.96  Aligned_cols=41  Identities=12%  Similarity=0.093  Sum_probs=32.6

Q ss_pred             HhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccc
Q psy7108         621 LNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS  664 (703)
Q Consensus       621 ~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~  664 (703)
                      +...+.++++++|||+|+.++..++..+|+   +|+.++.++|.
T Consensus       109 l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~  149 (302)
T PRK00870        109 FEQLDLTDVTLVCQDWGGLIGLRLAAEHPD---RFARLVVANTG  149 (302)
T ss_pred             HHHcCCCCEEEEEEChHHHHHHHHHHhChh---heeEEEEeCCC
Confidence            344566789999999999999988887654   68888888764

>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3

Probab=89.25  E-value=21  Score=34.58  Aligned_cols=171  Identities=10%  Similarity=0.096  Sum_probs=0.0

Q ss_pred             EEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcC--CCcEEEEEeccccCCCCCCCCccchhhccc
Q psy7108          74 KLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVE--SAAQVGSVEARRDLDSGRLDTDLVTREQSL  151 (703)
Q Consensus        74 ~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (703)
                      ++++...- ..+++...+.....++-+..+..+++ ...+.|.+|++.  ..+...++..-.                  
T Consensus         1 ~v~~~H~F-~sQ~v~~~~~EP~~~c~~g~d~Lfva-~~g~~Vev~~l~~~~~~~~~~F~Tv~------------------   60 (215)
T PF14761_consen    1 RVYNCHPF-GSQNVVPCEQEPTAVCCGGPDALFVA-ASGCKVEVYDLEQEECPLLCTFSTVG------------------   60 (215)
T ss_pred             CeEEeccc-CCceeeccccCcceeeccCCceEEEE-cCCCEEEEEEcccCCCceeEEEcchh------------------


Q ss_pred             CCccEEEEEEcCCCCEEEE------EecCCcEEEE--------------------------ECCCCceEEEEEeccCCcc
Q psy7108         152 KAKAVSTVCYSADGSCILA------AGQSKYICIY--------------------------SSREGILLKKFTITQNKSL  199 (703)
Q Consensus       152 ~~~~V~~i~~spdg~~l~s------~s~dg~I~lw--------------------------D~~~~~~~~~~~~~~~~~~  199 (703)
                         .|..+.++..|++|++      ++....+++|                          .-..+..+...+.+-.   
T Consensus        61 ---~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~~~~~~v~vRiaG~~v~~~~~~~~~~qleiiElPl~---  134 (215)
T PF14761_consen   61 ---RVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQKEENSPVRVRIAGHRVTPSFNESSKDQLEIIELPLS---  134 (215)
T ss_pred             ---heeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhcccCCcEEEEEcccccccCCCCccccceEEEEecCC---


Q ss_pred             ccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcc----------ceeecCCccceEEEEEcCCCCEEEEE
Q psy7108         200 DGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDM----------AARVLKPEVRVFCVKFSPTGQAWVAA  269 (703)
Q Consensus       200 ~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~----------~~~~~~h~~~V~~l~~spdg~~l~s~  269 (703)
                          ....+++..|-...+++++.+       .+.+|.++....          ...+..|...+.-...+=.+.++|..
T Consensus       135 ----~~p~ciaCC~~tG~LlVg~~~-------~l~lf~l~~~~~~~~~~~~lDFe~~l~~~~~~~~p~~v~ic~~yiA~~  203 (215)
T PF14761_consen  135 ----EPPLCIACCPVTGNLLVGCGN-------KLVLFTLKYQTIQSEKFSFLDFERSLIDHIDNFKPTQVAICEGYIAVM  203 (215)
T ss_pred             ----CCCCEEEecCCCCCEEEEcCC-------EEEEEEEEEEEEecccccEEechhhhhheecCceEEEEEEEeeEEEEe


Q ss_pred             eCCCEEEEEcCC
Q psy7108         270 TTEGVHIYSLDS  281 (703)
Q Consensus       270 s~Dgv~iwd~~~  281 (703)
                      +...++++.+..
T Consensus       204 s~~ev~Vlkl~~  215 (215)
T PF14761_consen  204 SDLEVLVLKLEQ  215 (215)
T ss_pred             cCCEEEEEEEeC

>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A)

Probab=89.16  E-value=0.1  Score=55.15  Aligned_cols=94  Identities=16%  Similarity=0.174  Sum_probs=0.0

Q ss_pred             hhhhcccccccceeecccCccccccCcccCcCCccceeeeecccchhhhhhhhcCCcccccccccccCCCCCCcCCCccc
Q psy7108         418 LFARMRTRGYDIWLWNARGNVYSREHVNLTSEQNKFYRFSCDFNVYTLELISRLGPLRIKPKVEKMETGSSDEESSKDDE  497 (703)
Q Consensus       418 ~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  497 (703)
                      ++..+.++||+|+..|.||...|.........-..                                             
T Consensus        66 ~~~~l~~~G~~V~~~D~rGHG~S~~~~~~~g~~~~---------------------------------------------  100 (332)
T TIGR01607        66 WIENFNKNGYSVYGLDLQGHGESDGLQNLRGHINC---------------------------------------------  100 (332)
T ss_pred             HHHHHHHCCCcEEEecccccCCCccccccccchhh---------------------------------------------


Q ss_pred             ceeecccCcCCCCCCccccccCchhhhhcccCCchhhHHHhHc-------------------cCC-CcceEEEEEecCce
Q psy7108         498 TEIRVLDEDVPRSSDTGDIQLKSTRMNELGLYDTTATIDYILN-------------------QTG-HNSLITLGHSLGTT  557 (703)
Q Consensus       498 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~~~~~~i~~-------------------~~~-~~~~~~~g~S~G~~  557 (703)
                                                .+.=+.|+.+.++.+..                   ... ..+++++|||+||.
T Consensus       101 --------------------------~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~  154 (332)
T TIGR01607       101 --------------------------FDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGN  154 (332)
T ss_pred             --------------------------HHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccH


Q ss_pred             eeeeccCCCchhhh-----hHHHhhhhhhh
Q psy7108         558 NVLIAGSLRPEYQT-----KVRLNVLWAQS  582 (703)
Q Consensus       558 ~~~~~~~~~~~~~~-----~~~~~~~~~p~  582 (703)
                      ++...+.+.++...     .++..+.++|.
T Consensus       155 i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~  184 (332)
T TIGR01607       155 IALRLLELLGKSNENNDKLNIKGCISLSGM  184 (332)
T ss_pred             HHHHHHHHhccccccccccccceEEEeccc

These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.

>KOG2369|consensus

Probab=89.13  E-value=0.56  Score=50.28  Aligned_cols=52  Identities=15%  Similarity=0.178  Sum_probs=43.6

Q ss_pred             chHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCch-----HHHHHHHheeccc
Q psy7108         612 DTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPE-----YQTKVRLNVLWAQ  663 (703)
Q Consensus       612 d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~-----~~~~i~~~~~l~p  663 (703)
                      .|...|+...+..|.+|+..|+||||+...+.++-..+.     .++.|+.|+.+++
T Consensus       167 kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~  223 (473)
T KOG2369|consen  167 KLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWVEAEGPAWCDKYIKSFVNIGA  223 (473)
T ss_pred             HHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhcccccchhHHHHHHHHHHccCc
Confidence            366789999999998899999999999998888876554     4578899998873

>TIGR03611 RutD pyrimidine utilization protein D

Probab=88.99  E-value=0.62  Score=46.41  Aligned_cols=44  Identities=23%  Similarity=0.153  Sum_probs=34.4

Q ss_pred             HhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccccc
Q psy7108         621 LNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFL  667 (703)
Q Consensus       621 ~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~  667 (703)
                      +...+..+++++|||+|+.+++.++...|+   +++.++.+++....
T Consensus        74 i~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~---~v~~~i~~~~~~~~  117 (257)
T TIGR03611        74 LDALNIERFHFVGHALGGLIGLQLALRYPE---RLLSLVLINAWSRP  117 (257)
T ss_pred             HHHhCCCcEEEEEechhHHHHHHHHHHChH---HhHHheeecCCCCC
Confidence            344456789999999999999998887655   68888888876543

This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.

>PRK10985 putative hydrolase; Provisional

Probab=88.90  E-value=0.32  Score=51.22  Aligned_cols=54  Identities=15%  Similarity=0.175  Sum_probs=40.8

Q ss_pred             cchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccc
Q psy7108         611 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  665 (703)
Q Consensus       611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~  665 (703)
                      -|+.+.++++.+..+..+++.+|||+|+.+...+++..++ ...+..++.++|..
T Consensus       115 ~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~-~~~~~~~v~i~~p~  168 (324)
T PRK10985        115 EDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGD-DLPLDAAVIVSAPL  168 (324)
T ss_pred             HHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCC-CCCccEEEEEcCCC
Confidence            6888999999987777789999999999987777776442 12366667777653

>PRK10985 putative hydrolase; Provisional

Probab=88.85  E-value=0.18  Score=53.14  Aligned_cols=37  Identities=19%  Similarity=0.224  Sum_probs=27.5

Q ss_pred             cCCchhhHHHhHccCCCcceEEEEEecCceeeeeccC
Q psy7108         528 LYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGS  564 (703)
Q Consensus       528 ~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~  564 (703)
                      ..|+.+.++++.+.-+..+++++|||+||.++...++
T Consensus       114 ~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~  150 (324)
T PRK10985        114 TEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLA  150 (324)
T ss_pred             hHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHH
Confidence            3567778889987655678999999999975444333

>COG2267 PldB Lysophospholipase [Lipid metabolism]

Probab=88.77  E-value=0.42  Score=49.62  Aligned_cols=112  Identities=17%  Similarity=0.156  Sum_probs=73.7

Q ss_pred             chhhhhcccCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhhhcccccchhhhccccc
Q psy7108         520 STRMNELGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLGNLVTKDMLEGLYG  599 (703)
Q Consensus       520 ~~~~~~~g~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~  599 (703)
                      .+|.+-||+.+.+.-...+...        +.  +.|+.|++.=.|+...+.+       ++.++..            .
T Consensus        35 g~Vvl~HG~~Eh~~ry~~la~~--------l~--~~G~~V~~~D~RGhG~S~r-------~~rg~~~------------~   85 (298)
T COG2267          35 GVVVLVHGLGEHSGRYEELADD--------LA--ARGFDVYALDLRGHGRSPR-------GQRGHVD------------S   85 (298)
T ss_pred             cEEEEecCchHHHHHHHHHHHH--------HH--hCCCEEEEecCCCCCCCCC-------CCcCCch------------h
Confidence            6788899988887744443322        11  6677777766666555432       1000000            1


Q ss_pred             ceeeeeeeeeecchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccccCC
Q psy7108         600 IYALNIFQVGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLGN  669 (703)
Q Consensus       600 ~~~~s~~e~~~~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~~~  669 (703)
                      |-.+      .=|+-+.++.+........++.+|||+|+.+...++...+   .+|..+++.+|+-.+..
T Consensus        86 f~~~------~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~---~~i~~~vLssP~~~l~~  146 (298)
T COG2267          86 FADY------VDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYP---PRIDGLVLSSPALGLGG  146 (298)
T ss_pred             HHHH------HHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCC---ccccEEEEECccccCCh
Confidence            0011      1345567777666444567999999999999999999877   78999999999988874

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=88.53  E-value=5.4  Score=43.10  Aligned_cols=102  Identities=16%  Similarity=0.234  Sum_probs=62.5

Q ss_pred             CCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC-CCEEE
Q psy7108          91 LSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD-GSCIL  169 (703)
Q Consensus        91 ~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd-g~~l~  169 (703)
                      ...+.+++.+|++++.|+...=|.|.++|+.++..++.+++.++-..+..........   +...-....-.+. ..+|+
T Consensus       307 ~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~---~~~~~~~~~~~~~~~l~Lv  383 (415)
T PF14655_consen  307 KREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDR---DRSNSNSPKSSSRFALFLV  383 (415)
T ss_pred             CceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeeccccc---ccccccccCCCCcceEEEE
Confidence            3458899999999988887777999999999999999998877632221000000000   0000000000000 12222


Q ss_pred             -EEecCCcEEEEECCCCceEEEEEecc
Q psy7108         170 -AAGQSKYICIYSSREGILLKKFTITQ  195 (703)
Q Consensus       170 -s~s~dg~I~lwD~~~~~~~~~~~~~~  195 (703)
                       -+-.-|.|-+|++++|..+..+....
T Consensus       384 IyaprRg~lEvW~~~~g~Rv~a~~v~k  410 (415)
T PF14655_consen  384 IYAPRRGILEVWSMRQGPRVAAFNVGK  410 (415)
T ss_pred             EEeccCCeEEEEecCCCCEEEEEEeCC
Confidence             35667899999999999888876543

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=88.37  E-value=2.1  Score=29.73  Aligned_cols=33  Identities=24%  Similarity=0.402  Sum_probs=26.9

Q ss_pred             cCeEEEEEcCCCCC--CEEEEEeCCCcEEEEEcCCC
Q psy7108          48 GPVSCIEFSPVLSS--TGMVSASWDKTVKLWNAVET   81 (703)
Q Consensus        48 ~~V~~l~~sp~~dg--~~L~sgs~Dg~V~iWd~~~~   81 (703)
                      ++|.+++|+|. .+  ++|+.+-.-|.|.|+|+++.
T Consensus         1 GAvR~~kFsP~-~~~~DLL~~~E~~g~vhi~D~R~~   35 (43)
T PF10313_consen    1 GAVRCCKFSPE-PGGNDLLAWAEHQGRVHIVDTRSN   35 (43)
T ss_pred             CCeEEEEeCCC-CCcccEEEEEccCCeEEEEEcccC
Confidence            47899999983 44  68888888899999999853

It contains a characteristic DLL sequence motif.

>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily

Probab=88.27  E-value=0.47  Score=48.10  Aligned_cols=47  Identities=13%  Similarity=0.129  Sum_probs=35.4

Q ss_pred             HHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccc
Q psy7108         616 TIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  665 (703)
Q Consensus       616 ~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~  665 (703)
                      .+..+++..+..+++++|||+|+.+++.++..+|+   .++.++.++|+.
T Consensus        85 ~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~---~v~~lvl~~~~~  131 (288)
T TIGR01250        85 ELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQ---HLKGLIISSMLD  131 (288)
T ss_pred             HHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCcc---ccceeeEecccc
Confidence            34445666666779999999999999998888664   567777766654

This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase

>KOG2100|consensus

Probab=88.14  E-value=0.1  Score=61.04  Aligned_cols=63  Identities=16%  Similarity=0.086  Sum_probs=45.0

Q ss_pred             CchhhHHHhHccC--CCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhhhcccccchhhhc
Q psy7108         530 DTTATIDYILNQT--GHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLGNLVTKDMLE  595 (703)
Q Consensus       530 d~~~~~~~i~~~~--~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  595 (703)
                      |.-.++.++++..  +.+++++.|+|+|||+....+...+  .+.+++.++.+|++++. +...-+.+
T Consensus       591 D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~--~~~fkcgvavaPVtd~~-~yds~~te  655 (755)
T KOG2100|consen  591 DQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDP--GDVFKCGVAVAPVTDWL-YYDSTYTE  655 (755)
T ss_pred             HHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCc--CceEEEEEEecceeeee-eecccccH
Confidence            3334778888776  3579999999999998766665433  23567778999999988 55544444

>PRK00870 haloalkane dehalogenase; Provisional

Probab=88.00  E-value=0.21  Score=51.89  Aligned_cols=36  Identities=11%  Similarity=0.037  Sum_probs=24.5

Q ss_pred             CCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhh
Q psy7108         543 GHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQ  581 (703)
Q Consensus       543 ~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p  581 (703)
                      +..++.++|||+||..+.....+.|   ++++.++..+|
T Consensus       113 ~~~~v~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~  148 (302)
T PRK00870        113 DLTDVTLVCQDWGGLIGLRLAAEHP---DRFARLVVANT  148 (302)
T ss_pred             CCCCEEEEEEChHHHHHHHHHHhCh---hheeEEEEeCC
Confidence            4568999999999987766555443   35555555544

>PLN02511 hydrolase

Probab=87.94  E-value=0.4  Score=51.86  Aligned_cols=52  Identities=17%  Similarity=0.100  Sum_probs=41.0

Q ss_pred             cchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccc
Q psy7108         611 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQ  663 (703)
Q Consensus       611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p  663 (703)
                      -|+.+.++++....+..+++++|||+|++++..++.++|+. ..|...+.+++
T Consensus       157 ~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~-~~v~~~v~is~  208 (388)
T PLN02511        157 GDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGEN-CPLSGAVSLCN  208 (388)
T ss_pred             HHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCC-CCceEEEEECC
Confidence            48899999999887777899999999999999999887752 12555555543

>PLN02511 hydrolase

Probab=87.69  E-value=0.23  Score=53.70  Aligned_cols=40  Identities=18%  Similarity=0.120  Sum_probs=30.7

Q ss_pred             cCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCc
Q psy7108         528 LYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRP  567 (703)
Q Consensus       528 ~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~  567 (703)
                      ..|+.++++++.......++.++|||+||..++..+.+.+
T Consensus       156 ~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~  195 (388)
T PLN02511        156 TGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEG  195 (388)
T ss_pred             hHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcC
Confidence            3477888899887655678999999999987665555544

>PLN02824 hydrolase, alpha/beta fold family protein

Probab=87.68  E-value=0.55  Score=48.50  Aligned_cols=38  Identities=26%  Similarity=0.145  Sum_probs=32.8

Q ss_pred             CCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccc
Q psy7108         625 GHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  665 (703)
Q Consensus       625 ~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~  665 (703)
                      +..+++++|||+|++++..++..+|+   +|+.+++++|..
T Consensus       100 ~~~~~~lvGhS~Gg~va~~~a~~~p~---~v~~lili~~~~  137 (294)
T PLN02824        100 VGDPAFVICNSVGGVVGLQAAVDAPE---LVRGVMLINISL  137 (294)
T ss_pred             cCCCeEEEEeCHHHHHHHHHHHhChh---heeEEEEECCCc
Confidence            45789999999999999999998776   689999988765

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=87.52  E-value=2.4  Score=29.49  Aligned_cols=31  Identities=19%  Similarity=0.218  Sum_probs=25.8

Q ss_pred             cEEEEEEcCCC---CEEEEEecCCcEEEEECCCC
Q psy7108         155 AVSTVCYSADG---SCILAAGQSKYICIYSSREG  185 (703)
Q Consensus       155 ~V~~i~~spdg---~~l~s~s~dg~I~lwD~~~~  185 (703)
                      .|.++.|+|+.   .+|+.+-..+.|.++|++++
T Consensus         2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~~   35 (43)
T PF10313_consen    2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRSN   35 (43)
T ss_pred             CeEEEEeCCCCCcccEEEEEccCCeEEEEEcccC
Confidence            68999999854   47888888899999999953

It contains a characteristic DLL sequence motif.

>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase

Probab=87.43  E-value=0.84  Score=44.99  Aligned_cols=44  Identities=30%  Similarity=0.322  Sum_probs=32.8

Q ss_pred             HhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccccc
Q psy7108         621 LNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFL  667 (703)
Q Consensus       621 ~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~  667 (703)
                      +..-+..+++.+|||+|++++..++..+|.   .++.+++++|...+
T Consensus        73 i~~~~~~~v~liG~S~Gg~~a~~~a~~~p~---~v~~li~~~~~~~~  116 (251)
T TIGR02427        73 LDHLGIERAVFCGLSLGGLIAQGLAARRPD---RVRALVLSNTAAKI  116 (251)
T ss_pred             HHHhCCCceEEEEeCchHHHHHHHHHHCHH---HhHHHhhccCcccc
Confidence            333355689999999999999988887554   57777887766443

Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.

>KOG3630|consensus

Probab=87.41  E-value=1.8  Score=50.86  Aligned_cols=106  Identities=8%  Similarity=0.119  Sum_probs=75.1

Q ss_pred             CcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEE
Q psy7108          47 EGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQV  126 (703)
Q Consensus        47 ~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~  126 (703)
                      ..-..++.|+|. -....+.+..|+.|++..+...............++|++|+|.|+.++.|-..|++.-|.. +++..
T Consensus       155 ~vf~~~~~wnP~-vp~n~av~l~dlsl~V~~~~~~~~~v~s~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P-~leik  232 (1405)
T KOG3630|consen  155 PVFQLKNVWNPL-VPLNSAVDLSDLSLRVKSTKQLAQNVTSFPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEP-SLEIK  232 (1405)
T ss_pred             ccccccccccCC-ccchhhhhccccchhhhhhhhhhhhhcccCcccceeeEEeccccceeeEecCCCeEEEeec-cccee
Confidence            345678889983 3445667788999998877544444444566778999999999999999999999988865 34444


Q ss_pred             EEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEE
Q psy7108         127 GSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILA  170 (703)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s  170 (703)
                      ..+.+...                .....|.+++|-....++++
T Consensus       233 ~~ip~Pp~----------------~e~yrvl~v~Wl~t~eflvv  260 (1405)
T KOG3630|consen  233 SEIPEPPV----------------EENYRVLSVTWLSTQEFLVV  260 (1405)
T ss_pred             ecccCCCc----------------CCCcceeEEEEecceeEEEE
Confidence            44443321                11347999999887777765

>PRK10349 carboxylesterase BioH; Provisional

Probab=87.37  E-value=0.85  Score=45.96  Aligned_cols=51  Identities=25%  Similarity=0.236  Sum_probs=37.5

Q ss_pred             chHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccc
Q psy7108         612 DTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF  666 (703)
Q Consensus       612 d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~  666 (703)
                      .+-.+++.+... +.+++++||||+|+.+++.++..+|   ++|+.+++++|...
T Consensus        60 ~~~~~~~~l~~~-~~~~~~lvGhS~Gg~ia~~~a~~~p---~~v~~lili~~~~~  110 (256)
T PRK10349         60 SLADMAEAVLQQ-APDKAIWLGWSLGGLVASQIALTHP---ERVQALVTVASSPC  110 (256)
T ss_pred             CHHHHHHHHHhc-CCCCeEEEEECHHHHHHHHHHHhCh---HhhheEEEecCccc
Confidence            344455555543 4578999999999999998888755   47888888877543

>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated

Probab=87.37  E-value=0.17  Score=51.98  Aligned_cols=83  Identities=19%  Similarity=0.123  Sum_probs=0.0

Q ss_pred             hhhhcccccccceeecccCccccccCcccCcCCccceeeeecccchhhhhhhhcCCcccccccccccCCCCCCcCCCccc
Q psy7108         418 LFARMRTRGYDIWLWNARGNVYSREHVNLTSEQNKFYRFSCDFNVYTLELISRLGPLRIKPKVEKMETGSSDEESSKDDE  497 (703)
Q Consensus       418 ~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  497 (703)
                      +...+.++||.|...|.||..-|.....--                                                  
T Consensus        49 la~~l~~~G~~v~~~Dl~G~G~S~~~~~~~--------------------------------------------------   78 (274)
T TIGR03100        49 LARRLAEAGFPVLRFDYRGMGDSEGENLGF--------------------------------------------------   78 (274)
T ss_pred             HHHHHHHCCCEEEEeCCCCCCCCCCCCCCH--------------------------------------------------


Q ss_pred             ceeecccCcCCCCCCccccccCchhhhhcccCCchhhHHHhHccC-CCcceEEEEEecCceeeeeccCCCchhhhhHHHh
Q psy7108         498 TEIRVLDEDVPRSSDTGDIQLKSTRMNELGLYDTTATIDYILNQT-GHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLN  576 (703)
Q Consensus       498 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~~~~~~i~~~~-~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~  576 (703)
                                                 +.-..|+.++++++.... +.+++.++|||+||..++......+    +++..
T Consensus        79 ---------------------------~~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~~~----~v~~l  127 (274)
T TIGR03100        79 ---------------------------EGIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPADL----RVAGL  127 (274)
T ss_pred             ---------------------------HHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhhCC----CccEE


Q ss_pred             hhhhh
Q psy7108         577 VLWAQ  581 (703)
Q Consensus       577 ~~~~p  581 (703)
                      +..+|
T Consensus       128 il~~p  132 (274)
T TIGR03100       128 VLLNP  132 (274)
T ss_pred             EEECC

This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.

>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like

Probab=87.33  E-value=0.55  Score=46.76  Aligned_cols=55  Identities=18%  Similarity=0.180  Sum_probs=39.4

Q ss_pred             hHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcC---C---chHHHHHHHheeccccccc
Q psy7108         613 TTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSL---R---PEYQTKVRLNVLWAQSAFL  667 (703)
Q Consensus       613 ~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~---~---~~~~~~i~~~~~l~p~~~~  667 (703)
                      +-..+..+.+.++..+|++++||||+.+..-++..   .   |....++..++++||-...
T Consensus        79 l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~  139 (233)
T PF05990_consen   79 LARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN  139 (233)
T ss_pred             HHHHHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence            33466666666788999999999999886655543   1   2344588888999987644

>PLN02578 hydrolase

Probab=87.28  E-value=1  Score=48.15  Aligned_cols=40  Identities=25%  Similarity=0.289  Sum_probs=32.5

Q ss_pred             CCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccccC
Q psy7108         626 HNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLG  668 (703)
Q Consensus       626 ~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~~  668 (703)
                      .++++.+|||+|+.+++.++..+|+   +++.++.++|...+.
T Consensus       151 ~~~~~lvG~S~Gg~ia~~~A~~~p~---~v~~lvLv~~~~~~~  190 (354)
T PLN02578        151 KEPAVLVGNSLGGFTALSTAVGYPE---LVAGVALLNSAGQFG  190 (354)
T ss_pred             cCCeEEEEECHHHHHHHHHHHhChH---hcceEEEECCCcccc
Confidence            4679999999999999999998665   688888887765443

>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase

Probab=87.20  E-value=0.29  Score=48.40  Aligned_cols=37  Identities=30%  Similarity=0.286  Sum_probs=25.6

Q ss_pred             CCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhh
Q psy7108         543 GHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS  582 (703)
Q Consensus       543 ~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~  582 (703)
                      +..++.++|||+||..++....+.|   ++++.++..+|.
T Consensus        77 ~~~~v~liG~S~Gg~~a~~~a~~~p---~~v~~li~~~~~  113 (251)
T TIGR02427        77 GIERAVFCGLSLGGLIAQGLAARRP---DRVRALVLSNTA  113 (251)
T ss_pred             CCCceEEEEeCchHHHHHHHHHHCH---HHhHHHhhccCc
Confidence            4468999999999987776555443   456666665543

Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.

>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional

Probab=87.16  E-value=0.72  Score=51.02  Aligned_cols=46  Identities=24%  Similarity=0.261  Sum_probs=37.8

Q ss_pred             HHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccccc
Q psy7108         619 YILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFL  667 (703)
Q Consensus       619 ~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~  667 (703)
                      .++...+..+++++|||+|+.+++.++..+|+   +|+.+++++|..+.
T Consensus       266 ~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe---~V~~LVLi~~~~~~  311 (481)
T PLN03087        266 SVLERYKVKSFHIVAHSLGCILALALAVKHPG---AVKSLTLLAPPYYP  311 (481)
T ss_pred             HHHHHcCCCCEEEEEECHHHHHHHHHHHhChH---hccEEEEECCCccc
Confidence            45666777889999999999999999888775   68889998876543

>PRK07868 acyl-CoA synthetase; Validated

Probab=87.02  E-value=0.25  Score=60.48  Aligned_cols=50  Identities=20%  Similarity=0.250  Sum_probs=38.1

Q ss_pred             chHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccc
Q psy7108         612 DTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS  664 (703)
Q Consensus       612 d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~  664 (703)
                      .+.+.++.|...++. +++++|||||+++++.+++.++.  ++|+.++.++..
T Consensus       127 ~l~~~l~~v~~~~~~-~v~lvG~s~GG~~a~~~aa~~~~--~~v~~lvl~~~~  176 (994)
T PRK07868        127 ALSEAIDTVKDVTGR-DVHLVGYSQGGMFCYQAAAYRRS--KDIASIVTFGSP  176 (994)
T ss_pred             HHHHHHHHHHHhhCC-ceEEEEEChhHHHHHHHHHhcCC--CccceEEEEecc
Confidence            577888888888875 79999999999999888775432  257777765543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	703
3dm0_A	694	Maltose Binding Protein Fusion With Rack1 From A. T		3e-08
2ymu_A	577	Structure Of A Highly Repetitive Propeller Structur		7e-07
2h9l_A	329	Wdr5delta23 Length = 329		8e-06
4aow_A	340	Crystal Structure Of The Human Rack1 Protein At A R		8e-06
2zkq_a	317	Structure Of A Mammalian Ribosomal 40s Subunit With		8e-06
3n0e_A	315	Crystal Structure Of Wdr5 Mutant (W330y) Length = 3		8e-06
3n0d_A	315	Crystal Structure Of Wdr5 Mutant (W330f) Length = 3		9e-06
3mxx_A	315	Crystal Structure Of Wdr5 Mutant (S62a) Length = 31		1e-05
2g99_A	308	Structural Basis For The Specific Recognition Of Me		1e-05
2g9a_A	311	Structural Basis For The Specific Recognition Of Me		1e-05
4a7j_A	318	Symmetric Dimethylation Of H3 Arginine 2 Is A Novel		1e-05
3smr_A	312	Crystal Structure Of Human Wd Repeat Domain 5 With		1e-05
2h9m_A	313	Wdr5 In Complex With Unmodified H3k4 Peptide Length		1e-05
3emh_A	318	Structural Basis Of Wdr5-Mll Interaction Length = 3		1e-05
2h13_A	317	Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length		1e-05
3psl_A	318	Fine-Tuning The Stimulation Of Mll1 Methyltransfera		1e-05
2h68_A	312	Histone H3 Recognition And Presentation By The Wdr5		1e-05
2cnx_A	315	Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.		2e-05
1trj_A	314	Homology Model Of Yeast Rack1 Protein Fitted Into 1		2e-05
3rfg_A	319	Crystal Structure Of The Yeast Rack1 Dimer In Space		2e-05
3izb_a	319	Localization Of The Small Subunit Ribosomal Protein		2e-05
3jyv_R	313	Structure Of The 40s Rrna And Proteins And PE TRNA		2e-05
3rfh_A	319	Crystal Structure Of The Yeast Rack1 Dimer In Space		2e-05
2xl2_A	334	Wdr5 In Complex With An Rbbp5 Peptide Recruited To		2e-05
2gnq_A	336	Structure Of Wdr5 Length = 336		2e-05
2co0_A	315	Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs		2e-05
3zey_7	318	High-resolution Cryo-electron Microscopy Structure		2e-05
1k8q_A	377	Crystal Structure Of Dog Gastric Lipase In Complex		4e-05
1k8q_A	377	Crystal Structure Of Dog Gastric Lipase In Complex		1e-04
3frx_A	319	Crystal Structure Of The Yeast Orthologue Of Rack1,		5e-05
1hlg_A	371	Crystal Structure Of Human Gastric Lipase Length =		1e-04
1hlg_A	371	Crystal Structure Of Human Gastric Lipase Length =		4e-04
1vyh_C	410	Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410		4e-04
2xzm_R	343	Crystal Structure Of The Eukaryotic 40s Ribosomal S		8e-04

>pdb|3DM0|A Chain A, Maltose Binding Protein Fusion With Rack1 From A. Thaliana Length = 694

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 44/87 (50%)
Query: 45  GHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGT 104
           GH   VSC+ FSP      +VSASWDKTVK+WN      +            VA  PDG+
Sbjct: 515 GHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGS 574
Query: 105 EIVVATLDGQLIMFDVESAAQVGSVEA 131
                  DG ++++D+    ++ S+EA
Sbjct: 575 LCASGGKDGVVLLWDLAEGKKLYSLEA 601

>pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 115/279 (41%), Gaps = 58/279 (20%)
Query: 41  EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNA----VETDTQHETIQLLSDALC 96
           + L+GH   V  + FSP      + SAS DKTVKLWN     ++T T H      S    
Sbjct: 133 QTLTGHSSSVWGVAFSP--DGQTIASASDDKTVKLWNRNGQLLQTLTGHS-----SSVWG 185
Query: 97  VAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAV 156
           VA+ PDG  I  A+ D  + +++                  G+L   L     S++    
Sbjct: 186 VAFSPDGQTIASASDDKTVKLWNRN----------------GQLLQTLTGHSSSVRG--- 226
Query: 157 STVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGN 216
             V +S DG  I +A   K + ++ +R G LL+  T+T + S   +N    R       +
Sbjct: 227 --VAFSPDGQTIASASDDKTVKLW-NRNGQLLQ--TLTGHSS--SVNGVAFRPDGQTIAS 279
Query: 217 VSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTE---- 272
            S  +T          +KL   + G +   +      V+ V FSP GQ   +A+ +    
Sbjct: 280 ASDDKT----------VKLWN-RNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVK 328
Query: 273 -----GVHIYSLDSGYVFDPFLLDISITPQSVKEALADK 306
                G H+ +L +G+    + +  S   Q++  A  DK
Sbjct: 329 LWNRNGQHLQTL-TGHSSSVWGVAFSPDGQTIASASDDK 366

>pdb|2H9L|A Chain A, Wdr5delta23 Length = 329

Iteration: 1
 Score = 49.3 bits (116), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 105/244 (43%), Gaps = 41/244 (16%)
Query: 41  EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSD-ALCVAY 99
           + +SGH+  +S + +S    S  +VSAS DKT+K+W+ V +    +T++  S+   C  +
Sbjct: 76  KTISGHKLGISDVAWSS--DSNLLVSASDDKTLKIWD-VSSGKCLKTLKGHSNYVFCCNF 132
Query: 100 KPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTV 159
            P    IV  + D  + ++DV++   + ++ A  D                     VS V
Sbjct: 133 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD--------------------PVSAV 172
Query: 160 CYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSL 219
            ++ DGS I+++       I+ +  G  LK         +D  N  ++  K +  G   L
Sbjct: 173 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL-------IDDDNPPVSFVKFSPNGKYIL 225
Query: 220 IETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCV--KFSPTGQAWVAATTEG--VH 275
             T +        LKL    KG         +   +C+   FS TG  W+ + +E   V+
Sbjct: 226 AATLDN------TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 279
Query: 276 IYSL 279
           I++L
Sbjct: 280 IWNL 283

>pdb|4AOW|A Chain A, Crystal Structure Of The Human Rack1 Protein At A Resolution Of 2.45 Angstrom Length = 340

Iteration: 1
 Score = 49.3 bits (116), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 40/86 (46%)
Query: 46  HEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTE 105
           H   VSC+ FSP  S+  +VS  WDK VK+WN      +   I        V   PDG+ 
Sbjct: 170 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSL 229
Query: 106 IVVATLDGQLIMFDVESAAQVGSVEA 131
                 DGQ +++D+     + +++ 
Sbjct: 230 CASGGKDGQAMLWDLNEGKHLYTLDG 255

>pdb|2ZKQ|AA Chain a, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 317

Iteration: 1
 Score = 49.3 bits (116), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 40/86 (46%)
Query: 46  HEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTE 105
           H   VSC+ FSP  S+  +VS  WDK VK+WN      +   I        V   PDG+ 
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSL 206
Query: 106 IVVATLDGQLIMFDVESAAQVGSVEA 131
                 DGQ +++D+     + +++ 
Sbjct: 207 CASGGKDGQAMLWDLNEGKHLYTLDG 232

>pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 105/244 (43%), Gaps = 41/244 (16%)
Query: 41  EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSD-ALCVAY 99
           + +SGH+  +S + +S    S  +VSAS DKT+K+W+ V +    +T++  S+   C  +
Sbjct: 62  KTISGHKLGISDVAWSS--DSNLLVSASDDKTLKIWD-VSSGKCLKTLKGHSNYVFCCNF 118
Query: 100 KPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTV 159
            P    IV  + D  + ++DV++   + ++ A  D                     VS V
Sbjct: 119 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD--------------------PVSAV 158
Query: 160 CYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSL 219
            ++ DGS I+++       I+ +  G  LK         +D  N  ++  K +  G   L
Sbjct: 159 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL-------IDDDNPPVSFVKFSPNGKYIL 211
Query: 220 IETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCV--KFSPTGQAWVAATTEG--VH 275
             T +        LKL    KG         +   +C+   FS TG  W+ + +E   V+
Sbjct: 212 AATLDN------TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 265
Query: 276 IYSL 279
           I++L
Sbjct: 266 IWNL 269

>pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 105/244 (43%), Gaps = 41/244 (16%)
Query: 41  EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSD-ALCVAY 99
           + +SGH+  +S + +S    S  +VSAS DKT+K+W+ V +    +T++  S+   C  +
Sbjct: 62  KTISGHKLGISDVAWSS--DSNLLVSASDDKTLKIWD-VSSGKCLKTLKGHSNYVFCCNF 118
Query: 100 KPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTV 159
            P    IV  + D  + ++DV++   + ++ A  D                     VS V
Sbjct: 119 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD--------------------PVSAV 158
Query: 160 CYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSL 219
            ++ DGS I+++       I+ +  G  LK         +D  N  ++  K +  G   L
Sbjct: 159 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL-------IDDDNPPVSFVKFSPNGKYIL 211
Query: 220 IETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCV--KFSPTGQAWVAATTEG--VH 275
             T +        LKL    KG         +   +C+   FS TG  W+ + +E   V+
Sbjct: 212 AATLDN------TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 265
Query: 276 IYSL 279
           I++L
Sbjct: 266 IWNL 269

>pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 105/244 (43%), Gaps = 41/244 (16%)
Query: 41  EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSD-ALCVAY 99
           + +SGH+  +S + +S    S  +VSAS DKT+K+W+ V +    +T++  S+   C  +
Sbjct: 62  KTISGHKLGISDVAWSS--DSNLLVSASDDKTLKIWD-VSSGKCLKTLKGHSNYVFCCNF 118
Query: 100 KPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTV 159
            P    IV  + D  + ++DV++   + ++ A  D                     VS V
Sbjct: 119 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD--------------------PVSAV 158
Query: 160 CYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSL 219
            ++ DGS I+++       I+ +  G  LK         +D  N  ++  K +  G   L
Sbjct: 159 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL-------IDDDNPPVSFVKFSPNGKYIL 211
Query: 220 IETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCV--KFSPTGQAWVAATTEG--VH 275
             T +        LKL    KG         +   +C+   FS TG  W+ + +E   V+
Sbjct: 212 AATLDN------TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 265
Query: 276 IYSL 279
           I++L
Sbjct: 266 IWNL 269

>pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 105/244 (43%), Gaps = 41/244 (16%)
Query: 41  EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSD-ALCVAY 99
           + +SGH+  +S + +S    S  +VSAS DKT+K+W+ V +    +T++  S+   C  +
Sbjct: 55  KTISGHKLGISDVAWSS--DSNLLVSASDDKTLKIWD-VSSGKCLKTLKGHSNYVFCCNF 111
Query: 100 KPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTV 159
            P    IV  + D  + ++DV++   + ++ A  D                     VS V
Sbjct: 112 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD--------------------PVSAV 151
Query: 160 CYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSL 219
            ++ DGS I+++       I+ +  G  LK         +D  N  ++  K +  G   L
Sbjct: 152 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL-------IDDDNPPVSFVKFSPNGKYIL 204
Query: 220 IETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCV--KFSPTGQAWVAATTEG--VH 275
             T +        LKL    KG         +   +C+   FS TG  W+ + +E   V+
Sbjct: 205 AATLDN------TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 258
Query: 276 IYSL 279
           I++L
Sbjct: 259 IWNL 262

>pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 105/244 (43%), Gaps = 41/244 (16%)
Query: 41  EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSD-ALCVAY 99
           + +SGH+  +S + +S    S  +VSAS DKT+K+W+ V +    +T++  S+   C  +
Sbjct: 58  KTISGHKLGISDVAWSS--DSNLLVSASDDKTLKIWD-VSSGKCLKTLKGHSNYVFCCNF 114
Query: 100 KPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTV 159
            P    IV  + D  + ++DV++   + ++ A  D                     VS V
Sbjct: 115 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD--------------------PVSAV 154
Query: 160 CYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSL 219
            ++ DGS I+++       I+ +  G  LK         +D  N  ++  K +  G   L
Sbjct: 155 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL-------IDDDNPPVSFVKFSPNGKYIL 207
Query: 220 IETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCV--KFSPTGQAWVAATTEG--VH 275
             T +        LKL    KG         +   +C+   FS TG  W+ + +E   V+
Sbjct: 208 AATLDN------TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 261
Query: 276 IYSL 279
           I++L
Sbjct: 262 IWNL 265

>pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 105/244 (43%), Gaps = 41/244 (16%)
Query: 41  EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSD-ALCVAY 99
           + +SGH+  +S + +S    S  +VSAS DKT+K+W+ V +    +T++  S+   C  +
Sbjct: 65  KTISGHKLGISDVAWSS--DSNLLVSASDDKTLKIWD-VSSGKCLKTLKGHSNYVFCCNF 121
Query: 100 KPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTV 159
            P    IV  + D  + ++DV++   + ++ A  D                     VS V
Sbjct: 122 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD--------------------PVSAV 161
Query: 160 CYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSL 219
            ++ DGS I+++       I+ +  G  LK         +D  N  ++  K +  G   L
Sbjct: 162 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL-------IDDDNPPVSFVKFSPNGKYIL 214
Query: 220 IETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCV--KFSPTGQAWVAATTEG--VH 275
             T +        LKL    KG         +   +C+   FS TG  W+ + +E   V+
Sbjct: 215 AATLDN------TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 268
Query: 276 IYSL 279
           I++L
Sbjct: 269 IWNL 272

>pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 105/244 (43%), Gaps = 41/244 (16%)
Query: 41  EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSD-ALCVAY 99
           + +SGH+  +S + +S    S  +VSAS DKT+K+W+ V +    +T++  S+   C  +
Sbjct: 59  KTISGHKLGISDVAWSS--DSNLLVSASDDKTLKIWD-VSSGKCLKTLKGHSNYVFCCNF 115
Query: 100 KPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTV 159
            P    IV  + D  + ++DV++   + ++ A  D                     VS V
Sbjct: 116 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD--------------------PVSAV 155
Query: 160 CYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSL 219
            ++ DGS I+++       I+ +  G  LK         +D  N  ++  K +  G   L
Sbjct: 156 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL-------IDDDNPPVSFVKFSPNGKYIL 208
Query: 220 IETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCV--KFSPTGQAWVAATTEG--VH 275
             T +        LKL    KG         +   +C+   FS TG  W+ + +E   V+
Sbjct: 209 AATLDN------TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 262
Query: 276 IYSL 279
           I++L
Sbjct: 263 IWNL 266

>pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 105/244 (43%), Gaps = 41/244 (16%)
Query: 41  EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSD-ALCVAY 99
           + +SGH+  +S + +S    S  +VSAS DKT+K+W+ V +    +T++  S+   C  +
Sbjct: 60  KTISGHKLGISDVAWSS--DSNLLVSASDDKTLKIWD-VSSGKCLKTLKGHSNYVFCCNF 116
Query: 100 KPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTV 159
            P    IV  + D  + ++DV++   + ++ A  D                     VS V
Sbjct: 117 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD--------------------PVSAV 156
Query: 160 CYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSL 219
            ++ DGS I+++       I+ +  G  LK         +D  N  ++  K +  G   L
Sbjct: 157 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL-------IDDDNPPVSFVKFSPNGKYIL 209
Query: 220 IETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCV--KFSPTGQAWVAATTEG--VH 275
             T +        LKL    KG         +   +C+   FS TG  W+ + +E   V+
Sbjct: 210 AATLDN------TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 263
Query: 276 IYSL 279
           I++L
Sbjct: 264 IWNL 267

>pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 105/244 (43%), Gaps = 41/244 (16%)
Query: 41  EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSD-ALCVAY 99
           + +SGH+  +S + +S    S  +VSAS DKT+K+W+ V +    +T++  S+   C  +
Sbjct: 65  KTISGHKLGISDVAWSS--DSNLLVSASDDKTLKIWD-VSSGKCLKTLKGHSNYVFCCNF 121
Query: 100 KPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTV 159
            P    IV  + D  + ++DV++   + ++ A  D                     VS V
Sbjct: 122 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD--------------------PVSAV 161
Query: 160 CYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSL 219
            ++ DGS I+++       I+ +  G  LK         +D  N  ++  K +  G   L
Sbjct: 162 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL-------IDDDNPPVSFVKFSPNGKYIL 214
Query: 220 IETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCV--KFSPTGQAWVAATTEG--VH 275
             T +        LKL    KG         +   +C+   FS TG  W+ + +E   V+
Sbjct: 215 AATLDN------TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 268
Query: 276 IYSL 279
           I++L
Sbjct: 269 IWNL 272

>pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 105/244 (43%), Gaps = 41/244 (16%)
Query: 41  EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSD-ALCVAY 99
           + +SGH+  +S + +S    S  +VSAS DKT+K+W+ V +    +T++  S+   C  +
Sbjct: 64  KTISGHKLGISDVAWSS--DSNLLVSASDDKTLKIWD-VSSGKCLKTLKGHSNYVFCCNF 120
Query: 100 KPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTV 159
            P    IV  + D  + ++DV++   + ++ A  D                     VS V
Sbjct: 121 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD--------------------PVSAV 160
Query: 160 CYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSL 219
            ++ DGS I+++       I+ +  G  LK         +D  N  ++  K +  G   L
Sbjct: 161 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL-------IDDDNPPVSFVKFSPNGKYIL 213
Query: 220 IETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCV--KFSPTGQAWVAATTEG--VH 275
             T +        LKL    KG         +   +C+   FS TG  W+ + +E   V+
Sbjct: 214 AATLDN------TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 267
Query: 276 IYSL 279
           I++L
Sbjct: 268 IWNL 271

>pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 105/244 (43%), Gaps = 41/244 (16%)
Query: 41  EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSD-ALCVAY 99
           + +SGH+  +S + +S    S  +VSAS DKT+K+W+ V +    +T++  S+   C  +
Sbjct: 65  KTISGHKLGISDVAWSS--DSNLLVSASDDKTLKIWD-VSSGKCLKTLKGHSNYVFCCNF 121
Query: 100 KPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTV 159
            P    IV  + D  + ++DV++   + ++ A  D                     VS V
Sbjct: 122 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD--------------------PVSAV 161
Query: 160 CYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSL 219
            ++ DGS I+++       I+ +  G  LK         +D  N  ++  K +  G   L
Sbjct: 162 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL-------IDDDNPPVSFVKFSPNGKYIL 214
Query: 220 IETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCV--KFSPTGQAWVAATTEG--VH 275
             T +        LKL    KG         +   +C+   FS TG  W+ + +E   V+
Sbjct: 215 AATLDN------TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 268
Query: 276 IYSL 279
           I++L
Sbjct: 269 IWNL 272

>pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 105/244 (43%), Gaps = 41/244 (16%)
Query: 41  EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSD-ALCVAY 99
           + +SGH+  +S + +S    S  +VSAS DKT+K+W+ V +    +T++  S+   C  +
Sbjct: 59  KTISGHKLGISDVAWSS--DSNLLVSASDDKTLKIWD-VSSGKCLKTLKGHSNYVFCCNF 115
Query: 100 KPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTV 159
            P    IV  + D  + ++DV++   + ++ A  D                     VS V
Sbjct: 116 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD--------------------PVSAV 155
Query: 160 CYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSL 219
            ++ DGS I+++       I+ +  G  LK         +D  N  ++  K +  G   L
Sbjct: 156 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL-------IDDDNPPVSFVKFSPNGKYIL 208
Query: 220 IETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCV--KFSPTGQAWVAATTEG--VH 275
             T +        LKL    KG         +   +C+   FS TG  W+ + +E   V+
Sbjct: 209 AATLDN------TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 262
Query: 276 IYSL 279
           I++L
Sbjct: 263 IWNL 266

>pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 108/263 (41%), Gaps = 47/263 (17%)
Query: 43  LSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQ----LLSDALCVA 98
           L+GH   VS ++FSP  +   + S+S DK +K+W A +   + +TI      +SD   VA
Sbjct: 22  LAGHTKAVSSVKFSP--NGEWLASSSADKLIKIWGAYDGKFE-KTISGHKLGISD---VA 75
Query: 99  YKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRD-------------LDSGRLD---- 141
           +  D   +V A+ D  L ++DV S   + +++   +             + SG  D    
Sbjct: 76  WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 135
Query: 142 -----TDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQN 196
                T +  +     +  VS V ++ DGS I+++       I+ +  G  LK       
Sbjct: 136 IWDVKTGMCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL----- 190
Query: 197 KSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFC 256
             +D  N  ++  K +  G   L  T +        LKL    KG         +   +C
Sbjct: 191 --IDDDNPPVSFVKFSPNGKYILAATLDN------TLKLWDYSKGKCLKTYTGHKNEKYC 242
Query: 257 V--KFSPTGQAWVAATTEGVHIY 277
           +   FS TG  W+ + +E   +Y
Sbjct: 243 IFANFSVTGGKWIVSGSEDNMVY 265

>pdb|1TRJ|A Chain A, Homology Model Of Yeast Rack1 Protein Fitted Into 11.7a Cryo-em Map Of Yeast 80s Ribosome Length = 314

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 92/222 (41%), Gaps = 30/222 (13%)
Query: 65  VSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAA 124
           +SASWDKT++LW+    +T    +   SD + V      + I+  + D  + ++ ++   
Sbjct: 81  LSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQC 140
Query: 125 QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSRE 184
                          L T L   +   + + V       D   I++AG  K +  ++   
Sbjct: 141 ---------------LATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWN--- 182
Query: 185 GILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMA 244
              L +F I  +    G N  IN   +T   + +LI +    + G ++L     KK   A
Sbjct: 183 ---LNQFQIEAD--FIGHNSNIN--TLTASPDGTLIAS--AGKDGEIMLWNLAAKK---A 230
Query: 245 ARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYSLDSGYVFD 286
              L  +  VF + FSP      AAT  G+ ++SLD  Y+ D
Sbjct: 231 MYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVD 272

>pdb|3RFG|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P63 Length = 319

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 92/222 (41%), Gaps = 30/222 (13%)
Query: 65  VSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAA 124
           +SASWDKT++LW+    +T    +   SD + V      + I+  + D  + ++ ++   
Sbjct: 81  LSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQC 140
Query: 125 QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSRE 184
                          L T L   +   + + V       D   I++AG  K +  ++   
Sbjct: 141 ---------------LATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWN--- 182
Query: 185 GILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMA 244
              L +F I  +    G N  IN   +T   + +LI +    + G ++L     KK   A
Sbjct: 183 ---LNQFQIEAD--FIGHNSNIN--TLTASPDGTLIAS--AGKDGEIMLWNLAAKK---A 230
Query: 245 ARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYSLDSGYVFD 286
              L  +  VF + FSP      AAT  G+ ++SLD  Y+ D
Sbjct: 231 MYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVD 272

>pdb|3IZB|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome Length = 319

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 92/222 (41%), Gaps = 30/222 (13%)
Query: 65  VSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAA 124
           +SASWDKT++LW+    +T    +   SD + V      + I+  + D  + ++ ++   
Sbjct: 81  LSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQC 140
Query: 125 QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSRE 184
                          L T L   +   + + V       D   I++AG  K +  ++   
Sbjct: 141 ---------------LATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWN--- 182
Query: 185 GILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMA 244
              L +F I  +    G N  IN   +T   + +LI +    + G ++L     KK   A
Sbjct: 183 ---LNQFQIEAD--FIGHNSNIN--TLTASPDGTLIAS--AGKDGEIMLWNLAAKK---A 230
Query: 245 ARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYSLDSGYVFD 286
              L  +  VF + FSP      AAT  G+ ++SLD  Y+ D
Sbjct: 231 MYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVD 272

>pdb|3JYV|R Chain R, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution Length = 313

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 92/222 (41%), Gaps = 30/222 (13%)
Query: 65  VSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAA 124
           +SASWDKT++LW+    +T    +   SD + V      + I+  + D  + ++ ++   
Sbjct: 75  LSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQC 134
Query: 125 QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSRE 184
                          L T L   +   + + V       D   I++AG  K +  ++   
Sbjct: 135 ---------------LATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWN--- 176
Query: 185 GILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMA 244
              L +F I  +    G N  IN   +T   + +LI +    + G ++L     KK   A
Sbjct: 177 ---LNQFQIEAD--FIGHNSNIN--TLTASPDGTLIAS--AGKDGEIMLWNLAAKK---A 224
Query: 245 ARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYSLDSGYVFD 286
              L  +  VF + FSP      AAT  G+ ++SLD  Y+ D
Sbjct: 225 MYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVD 266

>pdb|3RFH|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P21 Length = 319

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 92/222 (41%), Gaps = 30/222 (13%)
Query: 65  VSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAA 124
           +SASWDKT++LW+    +T    +   SD + V      + I+  + D  + ++ ++   
Sbjct: 81  LSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQC 140
Query: 125 QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSRE 184
                          L T L   +   + + V       D   I++AG  K +  ++   
Sbjct: 141 ---------------LATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWN--- 182
Query: 185 GILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMA 244
              L +F I  +    G N  IN   +T   + +LI +    + G ++L     KK   A
Sbjct: 183 ---LNQFQIEAD--FIGHNSNIN--TLTASPDGTLIAS--AGKDGEIMLWNLAAKK---A 230
Query: 245 ARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYSLDSGYVFD 286
              L  +  VF + FSP      AAT  G+ ++SLD  Y+ D
Sbjct: 231 MYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVD 272

>pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 105/244 (43%), Gaps = 41/244 (16%)
Query: 41  EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSD-ALCVAY 99
           + +SGH+  +S + +S    S  +VSAS DKT+K+W+ V +    +T++  S+   C  +
Sbjct: 81  KTISGHKLGISDVAWSS--DSNLLVSASDDKTLKIWD-VSSGKCLKTLKGHSNYVFCCNF 137
Query: 100 KPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTV 159
            P    IV  + D  + ++DV++   + ++ A  D                     VS V
Sbjct: 138 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD--------------------PVSAV 177
Query: 160 CYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSL 219
            ++ DGS I+++       I+ +  G  LK         +D  N  ++  K +  G   L
Sbjct: 178 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL-------IDDDNPPVSFVKFSPNGKYIL 230
Query: 220 IETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCV--KFSPTGQAWVAATTEG--VH 275
             T +        LKL    KG         +   +C+   FS TG  W+ + +E   V+
Sbjct: 231 AATLDN------TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 284
Query: 276 IYSL 279
           I++L
Sbjct: 285 IWNL 288

>pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 105/244 (43%), Gaps = 41/244 (16%)
Query: 41  EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSD-ALCVAY 99
           + +SGH+  +S + +S    S  +VSAS DKT+K+W+ V +    +T++  S+   C  +
Sbjct: 83  KTISGHKLGISDVAWSS--DSNLLVSASDDKTLKIWD-VSSGKCLKTLKGHSNYVFCCNF 139
Query: 100 KPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTV 159
            P    IV  + D  + ++DV++   + ++ A  D                     VS V
Sbjct: 140 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD--------------------PVSAV 179
Query: 160 CYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSL 219
            ++ DGS I+++       I+ +  G  LK         +D  N  ++  K +  G   L
Sbjct: 180 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL-------IDDDNPPVSFVKFSPNGKYIL 232
Query: 220 IETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCV--KFSPTGQAWVAATTEG--VH 275
             T +        LKL    KG         +   +C+   FS TG  W+ + +E   V+
Sbjct: 233 AATLDN------TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 286
Query: 276 IYSL 279
           I++L
Sbjct: 287 IWNL 290

>pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 108/263 (41%), Gaps = 47/263 (17%)
Query: 43  LSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQ----LLSDALCVA 98
           L+GH   VS ++FSP  +   + S+S DK +K+W A +   + +TI      +SD   VA
Sbjct: 22  LAGHTKAVSSVKFSP--NGEWLASSSADKLIKIWGAYDGKFE-KTISGHKLGISD---VA 75
Query: 99  YKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRD-------------LDSGRLD---- 141
           +  D   +V A+ D  L ++DV S   + +++   +             + SG  D    
Sbjct: 76  WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 135
Query: 142 -----TDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQN 196
                T +  +     +  VS V ++ DGS I+++       I+ +  G  LK       
Sbjct: 136 IWDVKTGMCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL----- 190
Query: 197 KSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFC 256
             +D  N  ++  K +  G   L  T +        LKL    KG         +   +C
Sbjct: 191 --IDDDNPPVSFVKFSPNGKYILAATLDND------LKLWDYSKGKCLKTYTGHKNEKYC 242
Query: 257 V--KFSPTGQAWVAATTEGVHIY 277
           +   FS TG  W+ + +E   +Y
Sbjct: 243 IFANFSVTGGKWIVSGSEDNMVY 265

>pdb|3ZEY|7 Chain 7, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 318

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/244 (22%), Positives = 99/244 (40%), Gaps = 44/244 (18%)
Query: 43  LSGHEGPVSCIEFSPVLSSTG--MVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYK 100
           L GH   VS +     LS+ G   VSASWD +++LWN      Q++ +    D L VA+ 
Sbjct: 63  LEGHSAFVSDV----ALSNNGNFAVSASWDHSLRLWNLQNGQCQYKFLGHTKDVLSVAFS 118
Query: 101 PDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVC 160
           PD  +IV    D  L +++V+                      + T  +      VS V 
Sbjct: 119 PDNRQIVSGGRDNALRVWNVKGEC-------------------MHTLSRGAHTDWVSCVR 159
Query: 161 YSA--DGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVS 218
           +S   D   I++ G    + ++    G L+          L G  +++    ++  G++ 
Sbjct: 160 FSPSLDAPVIVSGGWDNLVKVWDLATGRLVTD--------LKGHTNYVTSVTVSPDGSLC 211
Query: 219 LIETRETHEGGNVVLKLPGVKKGD-MAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIY 277
               ++       V +L  + KG+ ++       +   C  FSP      AAT +G+ I+
Sbjct: 212 ASSDKDG------VARLWDLTKGEALSEMAAGAPINQIC--FSPNRYWMCAATEKGIRIF 263
Query: 278 SLDS 281
            L++
Sbjct: 264 DLEN 267

>pdb|1K8Q|A Chain A, Crystal Structure Of Dog Gastric Lipase In Complex With A Phosphonate Inhibitor Length = 377

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 516 IQLKSTRMNELGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVR 574
           ++  +   +E+  YD  ATID+IL +TG + L  +GHS GTT   IA S  P+   +++
Sbjct: 116 VEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIK 174

>pdb|1K8Q|A Chain A, Crystal Structure Of Dog Gastric Lipase In Complex With A Phosphonate Inhibitor Length = 377

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 600 IYALNIFQVGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVR 656
            +A +  ++  YD  ATID+IL +TG + L  +GHS GTT   IA S  P+   +++
Sbjct: 118 FWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIK 174

>pdb|3FRX|A Chain A, Crystal Structure Of The Yeast Orthologue Of Rack1, Asc1. Length = 319

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 90/222 (40%), Gaps = 30/222 (13%)
Query: 65  VSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAA 124
           +SASWDKT++LW+    +T    +   SD   V      + I+  + D  + ++ ++   
Sbjct: 81  LSASWDKTLRLWDVATGETYQRFVGHKSDVXSVDIDKKASXIISGSRDKTIKVWTIKGQC 140
Query: 125 QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSRE 184
                          L T L   +   + + V       D   I++AG  K +  ++   
Sbjct: 141 ---------------LATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKXVKAWN--- 182
Query: 185 GILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMA 244
              L +F I  +    G N  IN   +T   + +LI +    + G + L     KK   A
Sbjct: 183 ---LNQFQIEAD--FIGHNSNIN--TLTASPDGTLIAS--AGKDGEIXLWNLAAKK---A 230
Query: 245 ARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYSLDSGYVFD 286
              L  +  VF + FSP      AAT  G+ ++SLD  Y+ D
Sbjct: 231 XYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVD 272

>pdb|1HLG|A Chain A, Crystal Structure Of Human Gastric Lipase Length = 371

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 516 IQLKSTRMNELGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVR 574
           ++  +   +E+  YD  ATID+I+ +TG   L  +GHS GTT   IA S  P    +++
Sbjct: 108 VEFWAFSFDEMAKYDLPATIDFIVKKTGQKQLHYVGHSQGTTIGFIAFSTNPSLAKRIK 166

>pdb|1HLG|A Chain A, Crystal Structure Of Human Gastric Lipase Length = 371

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 600 IYALNIFQVGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVR 656
            +A +  ++  YD  ATID+I+ +TG   L  +GHS GTT   IA S  P    +++
Sbjct: 110 FWAFSFDEMAKYDLPATIDFIVKKTGQKQLHYVGHSQGTTIGFIAFSTNPSLAKRIK 166

>pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 76/171 (44%), Gaps = 27/171 (15%)
Query: 26  PGVKKGDMAARVLKPE---VLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD 82
           P  +K D    + +P     LSGH  PV+ + F PV S   MVSAS D T+K+W+  ET 
Sbjct: 84  PLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSV--MVSASEDATIKVWD-YETG 140
Query: 83  TQHETIQLLSDALC-VAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLD 141
               T++  +D++  +++   G  +   + D  + ++D +    + ++            
Sbjct: 141 DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGH--------- 191
Query: 142 TDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFT 192
                         VS+V    +G  I++A + K I ++  + G  +K FT
Sbjct: 192 -----------DHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT 231

>pdb|2XZM|R Chain R, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 1 Length = 343

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Query: 41  EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYK 100
           + L+GH   VS +  S    +   +S+SWDKT++LW+     T    +   S+   VA+ 
Sbjct: 70  KALTGHNHFVSDLALSQ--ENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFS 127
Query: 101 PDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLD 136
           PD  +I+ A  + ++ ++++    +  S E     D
Sbjct: 128 PDNRQILSAGAEREIKLWNILGECKFSSAEKENHSD 163

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	703
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	100.0
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	100.0
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	100.0
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	100.0
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	100.0
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	100.0
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	99.97
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	99.97
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	99.97
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	99.97
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	99.97
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	99.97
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	99.97
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	99.97
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	99.97
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	99.97
2pm7_B	297	Protein transport protein SEC13, protein transport	99.97
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	99.97
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	99.97
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	99.97
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	99.97
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	99.97
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	99.97
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	99.97
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	99.97
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	99.97
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	99.97
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	99.97
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	99.96
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	99.96
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	99.96
3jrp_A	379	Fusion protein of protein transport protein SEC13	99.96
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	99.96
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	99.96
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	99.96
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	99.96
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	99.96
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	99.96
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	99.96
2pm7_B	297	Protein transport protein SEC13, protein transport	99.96
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	99.96
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	99.96
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	99.96
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	99.96
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	99.96
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	99.96
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	99.96
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	99.96
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	99.95
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	99.95
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	99.95
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	99.95
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	99.95
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	99.95
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	99.95
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	99.95
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	99.95
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	99.95
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	99.95
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	99.95
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	99.95
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	99.95
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	99.95
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	99.95
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	99.95
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	99.95
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	99.95
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	99.95
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	99.94
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	99.94
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	99.94
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	99.94
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	99.94
3jrp_A	379	Fusion protein of protein transport protein SEC13	99.94
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	99.94
3jro_A	753	Fusion protein of protein transport protein SEC13	99.94
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	99.94
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	99.94
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	99.94
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	99.94
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	99.94
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	99.94
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	99.94
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	99.93
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	99.93
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	99.93
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	99.93
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	99.93
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	99.93
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	99.93
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	99.93
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	99.93
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	99.93
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	99.93
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	99.93
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	99.93
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	99.93
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.93
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	99.92
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	99.92
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	99.92
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.92
3jro_A	753	Fusion protein of protein transport protein SEC13	99.92
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	99.92
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	99.92
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	99.92
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	99.92
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	99.92
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	99.92
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	99.91
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	99.91
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	99.91
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	99.91
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	99.91
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	99.91
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	99.9
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	99.89
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	99.89
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.88
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.87
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.87
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.86
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.86
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	99.86
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	99.85
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.84
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.83
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.83
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.81
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.8
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.79
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.78
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.77
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.76
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.75
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.75
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.75
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.74
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.74
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.74
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.74
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.73
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.73
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.73
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.72
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.72
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.72
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.71
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.7
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.7
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.7
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.69
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.68
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.66
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.66
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.65
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.65
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.64
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.64
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.63
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.62
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.62
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.59
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.59
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.57
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.56
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.56
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	99.54
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.53
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.52
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.48
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.48
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.47
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.47
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.46
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.45
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.44
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.43
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.39
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.36
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.34
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.33
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.3
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.29
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.29
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.28
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.27
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.22
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.21
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.18
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.18
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.15
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.15
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.15
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.14
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	99.13
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	99.1
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.1
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.08
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.08
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.06
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.04
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.02
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	99.02
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.02
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	98.97
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	98.95
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	98.95
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	98.94
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	98.91
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	98.91
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	98.91
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	98.9
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	98.88
2qe8_A	343	Uncharacterized protein; structural genomics, join	98.84
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	98.82
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	98.75
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	98.73
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	98.71
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	98.71
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	98.66
1k8q_A	377	Triacylglycerol lipase, gastric; APHA beta hydrola	98.63
2qe8_A	343	Uncharacterized protein; structural genomics, join	98.62
2ece_A	462	462AA long hypothetical selenium-binding protein;	98.59
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	98.57
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	98.53
2ece_A	462	462AA long hypothetical selenium-binding protein;	98.51
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	98.51
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	98.49
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	98.48
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	98.46
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	98.42
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	98.35
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	98.29
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	98.26
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	98.21
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	98.19
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	98.19
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	98.17
1k8q_A	377	Triacylglycerol lipase, gastric; APHA beta hydrola	98.15
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	98.12
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	98.11
2p4o_A	306	Hypothetical protein; putative lactonase, structur	98.1
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	98.09
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.08
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	98.07
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	98.07
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	98.07
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	98.02
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	97.99
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	97.92
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	97.9
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	97.85
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	97.84
4a2l_A	795	BT_4663, two-component system sensor histidine kin	97.67
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	97.67
4a2l_A	795	BT_4663, two-component system sensor histidine kin	97.64
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	97.6
2p4o_A	306	Hypothetical protein; putative lactonase, structur	97.57
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	97.57
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	97.57
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	97.53
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	97.51
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	97.5
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	97.49
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	97.42
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	97.35
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	97.34
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	97.3
3v65_B	386	Low-density lipoprotein receptor-related protein;	97.28
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	97.28
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	97.24
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	97.2
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	97.2
3v9f_A	781	Two-component system sensor histidine kinase/RESP	97.12
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	97.1
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	97.05
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	96.99
3v9f_A	781	Two-component system sensor histidine kinase/RESP	96.98
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	96.95
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	96.93
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	96.93
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	96.92
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	96.89
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	96.89
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	96.89
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	96.81
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	96.71
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	96.7
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	96.67
3kya_A	496	Putative phosphatase; structural genomics, joint c	96.66
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	96.63
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	96.31
3kya_A	496	Putative phosphatase; structural genomics, joint c	96.3
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	96.26
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	96.23
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	96.09
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	96.07
3icv_A	316	Lipase B, CALB; circular permutation, cleavage on	95.85
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	95.78
4hvt_A	711	Ritya.17583.B, post-proline cleaving enzyme; ssgci	95.68
3i1i_A	377	Homoserine O-acetyltransferase; structural genomic	95.64
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	95.56
3hju_A	342	Monoglyceride lipase; alpha/beta hydrolase, hydrol	95.53
3i1i_A	377	Homoserine O-acetyltransferase; structural genomic	95.29
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	95.27
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	95.27
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	95.12
1tca_A	317	Lipase; hydrolase(carboxylic esterase); HET: NAG;	94.97
1gpl_A	432	RP2 lipase; serine esterase, hydrolase, lipid degr	94.88
3icv_A	316	Lipase B, CALB; circular permutation, cleavage on	94.79
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	94.75
1tca_A	317	Lipase; hydrolase(carboxylic esterase); HET: NAG;	94.74
3s25_A	302	Hypothetical 7-bladed beta-propeller-like protein;	94.59
2fuk_A	220	XC6422 protein; A/B hydrolase, structural genomics	94.49
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	94.35
3rm3_A	270	MGLP, thermostable monoacylglycerol lipase; alpha/	94.29
3trd_A	208	Alpha/beta hydrolase; cellular processes; 1.50A {C	94.26
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	94.25
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	94.24
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	94.16
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	94.15
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	94.14
3pfb_A	270	Cinnamoyl esterase; alpha/beta hydrolase fold, hyd	93.87
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	93.85
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	93.78
2i3d_A	249	AGR_C_3351P, hypothetical protein ATU1826; structu	93.75
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	93.64
2zyr_A	484	Lipase, putative; fatty acid, hydrolase; HET: 1PE;	93.63
2x5x_A	342	PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE	93.62
3iii_A	560	COCE/NOND family hydrolase; structural genomics, c	93.58
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	93.55
3trd_A	208	Alpha/beta hydrolase; cellular processes; 1.50A {C	93.32
2qjw_A	176	Uncharacterized protein XCC1541; putative hydrolas	93.31
2vat_A	444	Acetyl-COA--deacetylcephalosporin C acetyltransfer	93.26
4fbl_A	281	LIPS lipolytic enzyme; thermostable, structural ge	93.16
2b9v_A	652	Alpha-amino acid ester hydrolase; catalytic triad,	93.1
1mpx_A	615	Alpha-amino acid ester hydrolase; alpha/beta hydro	93.09
3ds8_A	254	LIN2722 protein; unkonwn function, structural geno	93.03
2wtm_A	251	EST1E; hydrolase; 1.60A {Clostridium proteoclastic	92.94
2qs9_A	194	Retinoblastoma-binding protein 9; B5T overexpresse	92.9
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	92.87
3hju_A	342	Monoglyceride lipase; alpha/beta hydrolase, hydrol	92.81
3bdi_A	207	Uncharacterized protein TA0194; NP_393672.1, predi	92.77
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	92.72
3lp5_A	250	Putative cell surface hydrolase; structural genom	92.66
3ksr_A	290	Putative serine hydrolase; catalytic triad, struct	92.65
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	92.64
4e15_A	303	Kynurenine formamidase; alpha/beta hydrolase fold,	92.61
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	92.51
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	92.41
3fle_A	249	SE_1780 protein; structural genomics, APC61035.1,	92.39
3pe6_A	303	Monoglyceride lipase; alpha-beta hydrolase fold, 2	92.39
3dkr_A	251	Esterase D; alpha beta hydrolase, mechanism, catal	92.37
3p2m_A	330	Possible hydrolase; alpha/beta hydrolase superfami	92.37
3h04_A	275	Uncharacterized protein; protein with unknown func	92.36
3pfb_A	270	Cinnamoyl esterase; alpha/beta hydrolase fold, hyd	92.35
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	92.35
3qit_A	286	CURM TE, polyketide synthase; thioesterase, alpha/	92.23
3k2i_A	422	Acyl-coenzyme A thioesterase 4; alpha/beta hydrola	92.21
1m33_A	258	BIOH protein; alpha-betta-alpha sandwich, structur	92.2
3oos_A	278	Alpha/beta hydrolase family protein; APC67239.0, p	92.15
2fuk_A	220	XC6422 protein; A/B hydrolase, structural genomics	92.08
3fnb_A	405	Acylaminoacyl peptidase SMU_737; alpha-beta-alpha	92.07
3pe6_A	303	Monoglyceride lipase; alpha-beta hydrolase fold, 2	92.06
2q0x_A	335	Protein DUF1749, uncharacterized protein; alpha/be	91.99
3hlk_A	446	Acyl-coenzyme A thioesterase 2, mitochondrial; alp	91.99
3ibt_A	264	1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO,	91.9
3rm3_A	270	MGLP, thermostable monoacylglycerol lipase; alpha/	91.87
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	91.83
4f0j_A	315	Probable hydrolytic enzyme; alpha/beta hydrolase f	91.8
3fcy_A	346	Xylan esterase 1; alpha/beta hydrolase, carbohydra	91.73
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	91.7
3dqz_A	258	Alpha-hydroxynitrIle lyase-like protein; A/B-hydrl	91.69
2wtm_A	251	EST1E; hydrolase; 1.60A {Clostridium proteoclastic	91.68
2cjp_A	328	Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tu	91.66
1zi8_A	236	Carboxymethylenebutenolidase; alpha and beta prote	91.63
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	91.62
2rau_A	354	Putative esterase; NP_343859.1, putative lipase, s	91.6
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	91.55
1xi4_A	1630	Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle	91.49
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	91.4
3s25_A	302	Hypothetical 7-bladed beta-propeller-like protein;	91.36
1isp_A	181	Lipase; alpha/beta hydrolase fold, hydrolase; 1.30	91.31
3kda_A	301	CFTR inhibitory factor (CIF); alpha/beta hydrolase	91.3
2i3d_A	249	AGR_C_3351P, hypothetical protein ATU1826; structu	91.27
4g9e_A	279	AHL-lactonase, alpha/beta hydrolase fold protein;	91.25
1lns_A	763	X-prolyl dipeptidyl aminopetidase; alpha beta hydr	91.22
3h04_A	275	Uncharacterized protein; protein with unknown func	91.15
2hdw_A	367	Hypothetical protein PA2218; alpha/beta hydrolase	91.14
1jfr_A	262	Lipase; serine hydrolase; 1.90A {Streptomyces exfo	91.0
3llc_A	270	Putative hydrolase; structural genomics, joint cen	90.99
3nuz_A	398	Putative acetyl xylan esterase; structural genomic	90.96
2qjw_A	176	Uncharacterized protein XCC1541; putative hydrolas	90.93
3i2k_A	587	Cocaine esterase; alpha/beta hydrolase, hydrolase;	90.9
2h1i_A	226	Carboxylesterase; structural genomics, PSI-2, prot	90.86
3g8y_A	391	SUSD/RAGB-associated esterase-like protein; struct	90.78
2pbl_A	262	Putative esterase/lipase/thioesterase; alpha/beta-	90.68
1vlq_A	337	Acetyl xylan esterase; TM0077, structural genomics	90.66
3dkr_A	251	Esterase D; alpha beta hydrolase, mechanism, catal	90.57
3ott_A	758	Two-component system sensor histidine kinase; beta	90.54
2b61_A	377	Homoserine O-acetyltransferase; acyl-enzyme, aspar	90.49
1jfr_A	262	Lipase; serine hydrolase; 1.90A {Streptomyces exfo	90.46
3u1t_A	309	DMMA haloalkane dehalogenase; alpha/beta-hydrolase	90.4
3b12_A	304	Fluoroacetate dehalogenase; dehalogease, hydrolase	89.75
1wm1_A	317	Proline iminopeptidase; complex with inhibitor, hy	90.25
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	90.23
3oos_A	278	Alpha/beta hydrolase family protein; APC67239.0, p	90.23
1ex9_A	285	Lactonizing lipase; alpha-beta hydrolase fold, pho	90.18
1w52_X	452	Pancreatic lipase related protein 2; detergent, cl	90.08
3qit_A	286	CURM TE, polyketide synthase; thioesterase, alpha/	90.03
3bdi_A	207	Uncharacterized protein TA0194; NP_393672.1, predi	90.0
3f67_A	241	Putative dienelactone hydrolase; alpha-beta-alpha	89.99
2rau_A	354	Putative esterase; NP_343859.1, putative lipase, s	89.99
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	89.91
2r8b_A	251	AGR_C_4453P, uncharacterized protein ATU2452; APC6	89.91
3qvm_A	282	OLEI00960; structural genomics, PSI-biology, midwe	89.69
1zi8_A	236	Carboxymethylenebutenolidase; alpha and beta prote	89.68
3g9x_A	299	Haloalkane dehalogenase; alpha/beta hydrolase, hel	89.63
1azw_A	313	Proline iminopeptidase; aminopeptidase, serine pro	89.61
1fj2_A	232	Protein (acyl protein thioesterase 1); alpha/beta	89.52
1imj_A	210	CIB, CCG1-interacting factor B; alpha/beta hydrola	89.48
2vat_A	444	Acetyl-COA--deacetylcephalosporin C acetyltransfer	89.47
2xmz_A	269	Hydrolase, alpha/beta hydrolase fold family; menaq	89.46
3bdv_A	191	Uncharacterized protein DUF1234; DUF1234 family pr	89.44
3bjr_A	283	Putative carboxylesterase; structural genomics, jo	89.37
1wm1_A	317	Proline iminopeptidase; complex with inhibitor, hy	89.37
1bu8_A	452	Protein (pancreatic lipase related protein 2); hyd	89.37
4ao6_A	259	Esterase; hydrolase, thermo label; 1.60A {Unidenti	89.31
3e0x_A	245	Lipase-esterase related protein; APC60309, clostri	89.3
1l7a_A	318	Cephalosporin C deacetylase; structural genomics,	89.28
2pl5_A	366	Homoserine O-acetyltransferase; alpha/beta hydrola	89.24
3kxp_A	314	Alpha-(N-acetylaminomethylene)succinic acid hydrol	89.19
3hxk_A	276	Sugar hydrolase; alpha-beta protein., structural g	89.12
1a8q_A	274	Bromoperoxidase A1; haloperoxidase, oxidoreductase	89.09
3r40_A	306	Fluoroacetate dehalogenase; FACD, defluorinase, al	88.99
3vis_A	306	Esterase; alpha/beta-hydrolase fold, polyethylene	88.96
1ufo_A	238	Hypothetical protein TT1662; alpha-beta fold, hydr	88.96
4fbl_A	281	LIPS lipolytic enzyme; thermostable, structural ge	88.94
1azw_A	313	Proline iminopeptidase; aminopeptidase, serine pro	88.87
3kxp_A	314	Alpha-(N-acetylaminomethylene)succinic acid hydrol	88.81
3hss_A	293	Putative bromoperoxidase; alpha beta hydrolase, ox	88.8
1auo_A	218	Carboxylesterase; hydrolase; 1.80A {Pseudomonas fl	88.76
3sty_A	267	Methylketone synthase 1; alpha/beta hydrolase, dec	88.67
2pbl_A	262	Putative esterase/lipase/thioesterase; alpha/beta-	88.67
2puj_A	286	2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola;	88.61
4dnp_A	269	DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petu	88.51
1gpl_A	432	RP2 lipase; serine esterase, hydrolase, lipid degr	88.49
2o2g_A	223	Dienelactone hydrolase; YP_324580.1, structural ge	88.48
1tht_A	305	Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.	88.47
1tht_A	305	Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.	88.46
1ys1_X	320	Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor h	88.42
1ei9_A	279	Palmitoyl protein thioesterase 1; alpha/beta hydro	88.37
4ezi_A	377	Uncharacterized protein; alpha-beta hydrolases fol	88.33
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	88.3
1iup_A	282	META-cleavage product hydrolase; aromatic compound	88.26
3dqz_A	258	Alpha-hydroxynitrIle lyase-like protein; A/B-hydrl	88.06
1vkh_A	273	Putative serine hydrolase; structural genomics, jo	87.99
1u2e_A	289	2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase	87.97
1brt_A	277	Bromoperoxidase A2; haloperoxidase, oxidoreductase	87.93
1r3d_A	264	Conserved hypothetical protein VC1974; structural	87.91
2qs9_A	194	Retinoblastoma-binding protein 9; B5T overexpresse	87.9
2cjp_A	328	Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tu	87.88
4f0j_A	315	Probable hydrolytic enzyme; alpha/beta hydrolase f	87.87
1ufo_A	238	Hypothetical protein TT1662; alpha-beta fold, hydr	87.84
2xua_A	266	PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate	87.83
3l80_A	292	Putative uncharacterized protein SMU.1393C; alpha/	87.82
2pl5_A	366	Homoserine O-acetyltransferase; alpha/beta hydrola	87.81
3ksr_A	290	Putative serine hydrolase; catalytic triad, struct	87.79
4dnp_A	269	DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petu	87.64
1vkh_A	273	Putative serine hydrolase; structural genomics, jo	87.54
2ocg_A	254	Valacyclovir hydrolase; alpha beta hydrolase fold;	87.52
1isp_A	181	Lipase; alpha/beta hydrolase fold, hydrolase; 1.30	87.52
3hss_A	293	Putative bromoperoxidase; alpha beta hydrolase, ox	87.41
2x5x_A	342	PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE	87.39
3r40_A	306	Fluoroacetate dehalogenase; FACD, defluorinase, al	87.35
3qvm_A	282	OLEI00960; structural genomics, PSI-biology, midwe	87.29
1ex9_A	285	Lactonizing lipase; alpha-beta hydrolase fold, pho	87.27
2ocg_A	254	Valacyclovir hydrolase; alpha beta hydrolase fold;	87.23
3og9_A	209	Protein YAHD A copper inducible hydrolase; alpha/b	87.22
1m33_A	258	BIOH protein; alpha-betta-alpha sandwich, structur	87.21
2yys_A	286	Proline iminopeptidase-related protein; TTHA1809,	87.18
3u1t_A	309	DMMA haloalkane dehalogenase; alpha/beta-hydrolase	87.16
2b61_A	377	Homoserine O-acetyltransferase; acyl-enzyme, aspar	87.15
1tqh_A	247	Carboxylesterase precursor; tetrahedral intermedia	87.14
2wue_A	291	2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas	87.09
1q0r_A	298	RDMC, aclacinomycin methylesterase; anthracycline,	87.05
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	87.03
3r0v_A	262	Alpha/beta hydrolase fold protein; structural geno	87.03
3fcy_A	346	Xylan esterase 1; alpha/beta hydrolase, carbohydra	87.02
3e0x_A	245	Lipase-esterase related protein; APC60309, clostri	87.01
1hkh_A	279	Gamma lactamase; hydrolase, alpha/beta hydrolase,	86.94
2zsh_A	351	Probable gibberellin receptor GID1L1; plant hormon	86.91
3l80_A	292	Putative uncharacterized protein SMU.1393C; alpha/	86.9
1a8s_A	273	Chloroperoxidase F; haloperoxidase, oxidoreductase	86.8
1a8q_A	274	Bromoperoxidase A1; haloperoxidase, oxidoreductase	86.77

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=5.2e-33  Score=302.62  Aligned_cols=250  Identities=17%  Similarity=0.237  Sum_probs=225.0

Q ss_pred             ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEE
Q psy7108          28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEI  106 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~l  106 (703)
                      +++|| .++++.  +++.+|.+.|++++|+|  ++++|++|+.|++|++||+.+++....+..|...|.+++|+|+++.|
T Consensus       132 i~vwd~~~~~~~--~~l~~h~~~V~~v~~~~--~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l  207 (410)
T 1vyh_C          132 IKVWDYETGDFE--RTLKGHTDSVQDISFDH--SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHI  207 (410)
T ss_dssp             EEEEETTTCCCC--EEECCCSSCEEEEEECT--TSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEE
T ss_pred             EEEEECCCCcEE--EEEeccCCcEEEEEEcC--CCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEE
Confidence            67777 577888  89999999999999999  99999999999999999999887777777899999999999999999


Q ss_pred             EEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCc
Q psy7108         107 VVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGI  186 (703)
Q Consensus       107 as~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~  186 (703)
                      ++|+.|++|++||++++..+..+.+|..                    .|.+++|+|++++|++|+.|++|++||+++++
T Consensus       208 ~s~s~D~~i~~wd~~~~~~~~~~~~h~~--------------------~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~  267 (410)
T 1vyh_C          208 VSASRDKTIKMWEVQTGYCVKTFTGHRE--------------------WVRMVRPNQDGTLIASCSNDQTVRVWVVATKE  267 (410)
T ss_dssp             EEEETTSEEEEEETTTCCEEEEEECCSS--------------------CEEEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred             EEEeCCCeEEEEECCCCcEEEEEeCCCc--------------------cEEEEEECCCCCEEEEEcCCCeEEEEECCCCc
Confidence            9999999999999999999999988765                    89999999999999999999999999999998


Q ss_pred             eEEEEEeccCCccccccccceeeeeccC--------------------CCEEEEEcccCCCCCeeEEECCCCCCCcccee
Q psy7108         187 LLKKFTITQNKSLDGINDFINRRKMTEF--------------------GNVSLIETRETHEGGNVVLKLPGVKKGDMAAR  246 (703)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~v~~~~~spd--------------------g~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~  246 (703)
                      +...+..+.        ..|.+++|+|+                    |.++++++.++      .|++||+++++++..
T Consensus       268 ~~~~~~~h~--------~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~------~i~iwd~~~~~~~~~  333 (410)
T 1vyh_C          268 CKAELREHR--------HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK------TIKMWDVSTGMCLMT  333 (410)
T ss_dssp             EEEEECCCS--------SCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTS------EEEEEETTTTEEEEE
T ss_pred             eeeEecCCC--------ceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCC------eEEEEECCCCceEEE
Confidence            888776544        48999999997                    56777777653      899999999999999


Q ss_pred             ecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecc------eeeeEEEccchhhhHhhcCCcceEEEEEEec
Q psy7108         247 VLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDP------FLLDISITPQSVKEALADKDYAKALMMSLKL  318 (703)
Q Consensus       247 ~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~------~~~~~~~spd~~~~~l~sg~~~~~l~la~~l  318 (703)
                      +.+|...|.+++|+|+|++|++++.|+ |++||+.++++...      ...+++|+|++  .++++++.|+.+++ |++
T Consensus       334 ~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~--~~l~sgs~D~~i~v-W~~  409 (410)
T 1vyh_C          334 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKV-WEC  409 (410)
T ss_dssp             EECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSS--SCEEEEETTSEEEE-EC-
T ss_pred             EECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCC--CEEEEEeCCCcEEE-EeC
Confidence            999999999999999999999999999 99999988876443      34789999999  88999999999998 864

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=3.8e-33  Score=293.33  Aligned_cols=252  Identities=18%  Similarity=0.276  Sum_probs=222.9

Q ss_pred             ceeeccC-CCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEE
Q psy7108          28 VKKGDMA-ARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEI  106 (703)
Q Consensus        28 v~~~d~t-g~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~l  106 (703)
                      +++|+.. ++......+.+|...|.+++|+|  ++..+++++.|++|++||+.+++....+..+...+.+++|+|++++|
T Consensus        60 v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~--~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l  137 (321)
T 3ow8_A           60 VKVWKWRDERLDLQWSLEGHQLGVVSVDISH--TLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYL  137 (321)
T ss_dssp             EEEEEEETTEEEEEEEECCCSSCEEEEEECS--SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEE
T ss_pred             EEEEECCCCCeeeeeeeccCCCCEEEEEECC--CCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEE
Confidence            4556533 32211146899999999999999  99999999999999999999998777777888899999999999999


Q ss_pred             EEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCc
Q psy7108         107 VVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGI  186 (703)
Q Consensus       107 as~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~  186 (703)
                      ++++.|+.|++||+++++....+..+..                    .|.+++|+|++++|++|+.|+.|++||+++++
T Consensus       138 ~~g~~dg~v~i~~~~~~~~~~~~~~~~~--------------------~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~  197 (321)
T 3ow8_A          138 ATGTHVGKVNIFGVESGKKEYSLDTRGK--------------------FILSIAYSPDGKYLASGAIDGIINIFDIATGK  197 (321)
T ss_dssp             EEECTTSEEEEEETTTCSEEEEEECSSS--------------------CEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred             EEEcCCCcEEEEEcCCCceeEEecCCCc--------------------eEEEEEECCCCCEEEEEcCCCeEEEEECCCCc
Confidence            9999999999999999998888877654                    79999999999999999999999999999999


Q ss_pred             eEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEE
Q psy7108         187 LLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAW  266 (703)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l  266 (703)
                      .+..+..+.        ..|.+++|+|+++++++++.++      .|++||+++++....+.+|...|.+++|+|++++|
T Consensus       198 ~~~~~~~h~--------~~v~~l~~spd~~~l~s~s~dg------~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l  263 (321)
T 3ow8_A          198 LLHTLEGHA--------MPIRSLTFSPDSQLLVTASDDG------YIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHF  263 (321)
T ss_dssp             EEEEECCCS--------SCCCEEEECTTSCEEEEECTTS------CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEE
T ss_pred             EEEEEcccC--------CceeEEEEcCCCCEEEEEcCCC------eEEEEECCCcceeEEEcCCCCceEEEEECCCCCEE
Confidence            888876544        4899999999999999888764      89999999999998999999999999999999999


Q ss_pred             EEEeCCC-EEEEEcCCCceecce------eeeEEEccchhhhHhhcCCcceEEEEEEec
Q psy7108         267 VAATTEG-VHIYSLDSGYVFDPF------LLDISITPQSVKEALADKDYAKALMMSLKL  318 (703)
Q Consensus       267 ~s~s~Dg-v~iwd~~~~~~~~~~------~~~~~~spd~~~~~l~sg~~~~~l~la~~l  318 (703)
                      ++++.|+ |++||+.++++...+      ..+++|+|++  ..+++++.|+.+++ |+.
T Consensus       264 ~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g--~~l~s~~~d~~i~v-wd~  319 (321)
T 3ow8_A          264 VSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNG--SKIVSVGDDQEIHI-YDC  319 (321)
T ss_dssp             EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTS--SEEEEEETTCCEEE-EEC
T ss_pred             EEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCC--CEEEEEeCCCeEEE-EeC
Confidence            9999999 999999998876544      4679999999  78999999999998 875

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=100.00  E-value=7.5e-32  Score=280.96  Aligned_cols=250  Identities=14%  Similarity=0.098  Sum_probs=214.4

Q ss_pred             ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEE
Q psy7108          28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEI  106 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~l  106 (703)
                      +++|| .+++++  +.+.+|..+|.+++|+|  ++++|++|+.|++|++||+.+++....+..|.+.|.+++|+|++++|
T Consensus        37 v~lWd~~~~~~~--~~~~~~~~~v~~~~~~~--~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l  112 (304)
T 2ynn_A           37 VELWNYETQVEV--RSIQVTETPVRAGKFIA--RKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYV  112 (304)
T ss_dssp             EEEEETTTTEEE--EEEECCSSCEEEEEEEG--GGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEE
T ss_pred             EEEEECCCCcee--EEeeccCCcEEEEEEeC--CCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEE
Confidence            66677 467777  88999999999999999  99999999999999999999998888888999999999999999999


Q ss_pred             EEEECCCeEEEEEcCCC-cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC-CCCEEEEEecCCcEEEEECCC
Q psy7108         107 VVATLDGQLIMFDVESA-AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA-DGSCILAAGQSKYICIYSSRE  184 (703)
Q Consensus       107 as~s~dg~I~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp-dg~~l~s~s~dg~I~lwD~~~  184 (703)
                      ++|+.|++|++||++++ .....+.+|..                    .|.+++|+| ++..|++|+.|++|++||+++
T Consensus       113 ~sgs~D~~v~lWd~~~~~~~~~~~~~h~~--------------------~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~  172 (304)
T 2ynn_A          113 LSGSDDLTVKLWNWENNWALEQTFEGHEH--------------------FVMCVAFNPKDPSTFASGCLDRTVKVWSLGQ  172 (304)
T ss_dssp             EEEETTSCEEEEEGGGTTEEEEEECCCCS--------------------CEEEEEECTTCTTEEEEEETTSEEEEEETTC
T ss_pred             EEECCCCeEEEEECCCCcchhhhhcccCC--------------------cEEEEEECCCCCCEEEEEeCCCeEEEEECCC
Confidence            99999999999999887 44556666654                    899999999 678999999999999999988


Q ss_pred             CceEEEEEeccCCccccccccceeeeecc--CCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCC
Q psy7108         185 GILLKKFTITQNKSLDGINDFINRRKMTE--FGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPT  262 (703)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~v~~~~~sp--dg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spd  262 (703)
                      +.....+...       +...+..+.++|  +++++++++.++      .|++||+++++++..+.+|...|.+++|+|+
T Consensus       173 ~~~~~~~~~~-------~~~~v~~~~~~~~~~~~~l~s~s~D~------~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~  239 (304)
T 2ynn_A          173 STPNFTLTTG-------QERGVNYVDYYPLPDKPYMITASDDL------TIKIWDYQTKSCVATLEGHMSNVSFAVFHPT  239 (304)
T ss_dssp             SSCSEEEECC-------CTTCEEEEEECCSTTCCEEEEEETTS------EEEEEETTTTEEEEEEECCSSCEEEEEECSS
T ss_pred             CCccceeccC-------CcCcEEEEEEEEcCCCCEEEEEcCCC------eEEEEeCCCCccceeeCCCCCCEEEEEECCC
Confidence            7766555422       234677788876  677888877664      8999999999999999999999999999999


Q ss_pred             CCEEEEEeCCC-EEEEEcCCCceeccee------eeEEEccchhhhHhhcCCcceEEEE
Q psy7108         263 GQAWVAATTEG-VHIYSLDSGYVFDPFL------LDISITPQSVKEALADKDYAKALMM  314 (703)
Q Consensus       263 g~~l~s~s~Dg-v~iwd~~~~~~~~~~~------~~~~~spd~~~~~l~sg~~~~~l~l  314 (703)
                      +++|++++.|| |++||..+++....+.      .+++++|++...++++|..++.+.+
T Consensus       240 ~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g~~~~  298 (304)
T 2ynn_A          240 LPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVL  298 (304)
T ss_dssp             SSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTEEEEE
T ss_pred             CCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCceEEE
Confidence            99999999999 9999999988765543      5688899885556888877776554

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=5.4e-32  Score=294.54  Aligned_cols=242  Identities=18%  Similarity=0.315  Sum_probs=221.0

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEc
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDV  120 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~  120 (703)
                      ..+.+|.++|++++|+|  ++.+|++|+.||+|++||+.+++....+..|.+.|.+++|+|++++|++|+.|++|++||+
T Consensus       102 ~~l~gh~~~V~~~~~~p--~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~  179 (410)
T 1vyh_C          102 YALSGHRSPVTRVIFHP--VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDF  179 (410)
T ss_dssp             CEEECCSSCEEEEEECS--SSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEET
T ss_pred             EeecccCCcEEEEEEcC--CCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeC
Confidence            67889999999999999  9999999999999999999998877888889999999999999999999999999999999


Q ss_pred             CCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccc
Q psy7108         121 ESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLD  200 (703)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~  200 (703)
                      .+++.+..+.+|..                    .|.+++|+|++++|++|+.|++|++||++++.++.++..|.     
T Consensus       180 ~~~~~~~~~~~h~~--------------------~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~-----  234 (410)
T 1vyh_C          180 QGFECIRTMHGHDH--------------------NVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHR-----  234 (410)
T ss_dssp             TSSCEEECCCCCSS--------------------CEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCS-----
T ss_pred             CCCceeEEEcCCCC--------------------CEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCC-----
Confidence            99998888877765                    89999999999999999999999999999999998887554     


Q ss_pred             cccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCC------------------
Q psy7108         201 GINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPT------------------  262 (703)
Q Consensus       201 ~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spd------------------  262 (703)
                         ..+.++.++|+|..+++++.++      .|++||+.++++...+.+|...|.+++|+|+                  
T Consensus       235 ---~~v~~~~~~~~g~~l~s~s~D~------~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (410)
T 1vyh_C          235 ---EWVRMVRPNQDGTLIASCSNDQ------TVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSG  305 (410)
T ss_dssp             ---SCEEEEEECTTSSEEEEEETTS------CEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-----
T ss_pred             ---ccEEEEEECCCCCEEEEEcCCC------eEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccC
Confidence               4899999999999999888764      8999999999999899999999999999996                  


Q ss_pred             --CCEEEEEeCCC-EEEEEcCCCceecce------eeeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108         263 --GQAWVAATTEG-VHIYSLDSGYVFDPF------LLDISITPQSVKEALADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       263 --g~~l~s~s~Dg-v~iwd~~~~~~~~~~------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~  321 (703)
                        |.+|++|+.|+ |++||+.++.++..+      ..+++|+|++  .++++++.|+.+++ |++...
T Consensus       306 ~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g--~~l~s~s~D~~i~v-wd~~~~  370 (410)
T 1vyh_C          306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGG--KFILSCADDKTLRV-WDYKNK  370 (410)
T ss_dssp             --CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSS--SCEEEEETTTEEEE-ECCTTS
T ss_pred             CCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCC--CEEEEEeCCCeEEE-EECCCC
Confidence              67899999999 999999998875444      4679999999  88999999999999 988654

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=100.00  E-value=9.3e-32  Score=280.29  Aligned_cols=243  Identities=12%  Similarity=0.147  Sum_probs=212.8

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEc
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDV  120 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~  120 (703)
                      +++.+|.+.|++++|+|  ++++|++|+.||+|++||+.++.....+..|...|.+++|+|++++|++|+.|++|++||+
T Consensus         7 ~~~~~h~~~V~~~~fsp--~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~   84 (304)
T 2ynn_A            7 KTFSNRSDRVKGIDFHP--TEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNY   84 (304)
T ss_dssp             EEEEEECSCEEEEEECS--SSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEET
T ss_pred             EeecCCCCceEEEEECC--CCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEEC
Confidence            78999999999999999  9999999999999999999998877888889999999999999999999999999999999


Q ss_pred             CCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCce-EEEEEeccCCcc
Q psy7108         121 ESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGIL-LKKFTITQNKSL  199 (703)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~-~~~~~~~~~~~~  199 (703)
                      ++++.+..+.+|..                    .|.+++|+|++++|++|+.|++|++||++++.. ...+..      
T Consensus        85 ~~~~~~~~~~~h~~--------------------~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~------  138 (304)
T 2ynn_A           85 NTGEKVVDFEAHPD--------------------YIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEG------  138 (304)
T ss_dssp             TTCCEEEEEECCSS--------------------CEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECC------
T ss_pred             CCCcEEEEEeCCCC--------------------cEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcc------
Confidence            99999999988865                    899999999999999999999999999998744 444443      


Q ss_pred             ccccccceeeeecc-CCCEEEEEcccCCCCCeeEEECCCCCCCccceeec-CCccceEEEEEcC--CCCEEEEEeCCC-E
Q psy7108         200 DGINDFINRRKMTE-FGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL-KPEVRVFCVKFSP--TGQAWVAATTEG-V  274 (703)
Q Consensus       200 ~~~~~~v~~~~~sp-dg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~-~h~~~V~~l~~sp--dg~~l~s~s~Dg-v  274 (703)
                        |...|.+++|+| ++..+++++.++      .|++||++++.....+. .|...+..++|+|  ++++|++++.|+ |
T Consensus       139 --h~~~v~~v~~~p~~~~~l~sgs~D~------~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i  210 (304)
T 2ynn_A          139 --HEHFVMCVAFNPKDPSTFASGCLDR------TVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTI  210 (304)
T ss_dssp             --CCSCEEEEEECTTCTTEEEEEETTS------EEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEE
T ss_pred             --cCCcEEEEEECCCCCCEEEEEeCCC------eEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeE
Confidence              445899999999 567777777664      89999998877665554 4667899999987  778999999999 9


Q ss_pred             EEEEcCCCceecce------eeeEEEccchhhhHhhcCCcceEEEEEEecCchh
Q psy7108         275 HIYSLDSGYVFDPF------LLDISITPQSVKEALADKDYAKALMMSLKLNEQG  322 (703)
Q Consensus       275 ~iwd~~~~~~~~~~------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~~  322 (703)
                      ++||+.++++...+      ...++|+|++  ..+++++.|+.+++ |++....
T Consensus       211 ~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~--~~l~s~s~Dg~i~i-Wd~~~~~  261 (304)
T 2ynn_A          211 KIWDYQTKSCVATLEGHMSNVSFAVFHPTL--PIIISGSEDGTLKI-WNSSTYK  261 (304)
T ss_dssp             EEEETTTTEEEEEEECCSSCEEEEEECSSS--SEEEEEETTSCEEE-EETTTCC
T ss_pred             EEEeCCCCccceeeCCCCCCEEEEEECCCC--CEEEEEcCCCeEEE-EECCCCc
Confidence            99999998876544      3568999999  78999999999999 9987543

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=100.00  E-value=2.1e-31  Score=282.75  Aligned_cols=241  Identities=15%  Similarity=0.154  Sum_probs=200.8

Q ss_pred             cCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEE----EecCCCcEEEEEEecCCCEEEEEECCCeEEEEE
Q psy7108          44 SGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHE----TIQLLSDALCVAYKPDGTEIVVATLDGQLIMFD  119 (703)
Q Consensus        44 ~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~----~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd  119 (703)
                      ..|...|++++|+|  + ..|++|+.||+|+|||+.+++....    ..+|.+.|.+++|+|+|++|++|+.|++|++||
T Consensus        79 ~~~~~~v~~~~~s~--d-~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd  155 (344)
T 4gqb_B           79 VQTEAGVADLTWVG--E-RGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWD  155 (344)
T ss_dssp             EEESSCEEEEEEET--T-TEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             eccCCCEEEEEEeC--C-CeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence            34678899999999  7 4788999999999999998765432    336999999999999999999999999999999


Q ss_pred             cCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCC-EEEEEecCCcEEEEECCCCceEEEEEeccCCc
Q psy7108         120 VESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGS-CILAAGQSKYICIYSSREGILLKKFTITQNKS  198 (703)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~-~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~  198 (703)
                      +++++.+..+.+|..                    .|.+++|+|++. .|++++.|++|++||++++++...+....   
T Consensus       156 ~~~~~~~~~~~~h~~--------------------~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~---  212 (344)
T 4gqb_B          156 LAQQVVLSSYRAHAA--------------------QVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSA---  212 (344)
T ss_dssp             TTTTEEEEEECCCSS--------------------CEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC------
T ss_pred             CCCCcEEEEEcCcCC--------------------ceEEEEecCCCCCceeeeccccccccccccccceeeeeecce---
Confidence            999999999988765                    899999999884 78899999999999999998877764322   


Q ss_pred             cccccccceeeeeccCCC-EEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCC-CEEEEEeCCC-EE
Q psy7108         199 LDGINDFINRRKMTEFGN-VSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTG-QAWVAATTEG-VH  275 (703)
Q Consensus       199 ~~~~~~~v~~~~~spdg~-~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg-~~l~s~s~Dg-v~  275 (703)
                         +...+.+++|+|++. ++++++.+      ..|++||+++++++..+.+|...|++++|+|++ ++|++++.|+ |+
T Consensus       213 ---~~~~~~~~~~~p~~~~~l~sg~~d------g~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~  283 (344)
T 4gqb_B          213 ---PGYLPTSLAWHPQQSEVFVFGDEN------GTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLA  283 (344)
T ss_dssp             ----CCCEEEEEECSSCTTEEEEEETT------SEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEE
T ss_pred             ---eeccceeeeecCCCCcceEEeccC------CcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEE
Confidence               223678999999765 55555554      389999999999999999999999999999998 5789999999 99


Q ss_pred             EEEcCCCceec-----ceeeeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108         276 IYSLDSGYVFD-----PFLLDISITPQSVKEALADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       276 iwd~~~~~~~~-----~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~  321 (703)
                      |||+.+++.+.     ..+.+++|+|++. .++++++.|+.+++ |.+...
T Consensus       284 vwd~~~~~~~~~~~H~~~V~~v~~sp~~~-~llas~s~D~~v~~-w~v~~~  332 (344)
T 4gqb_B          284 VLDSSLSELFRSQAHRDFVRDATWSPLNH-SLLTTVGWDHQVVH-HVVPTE  332 (344)
T ss_dssp             EECTTCCEEEEECCCSSCEEEEEECSSST-TEEEEEETTSCEEE-EECCC-
T ss_pred             EEECCCCcEEEEcCCCCCEEEEEEeCCCC-eEEEEEcCCCeEEE-EECCCC
Confidence            99999887643     3457899999882 35778999999998 998754

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=100.00  E-value=3.2e-31  Score=278.26  Aligned_cols=243  Identities=19%  Similarity=0.291  Sum_probs=211.1

Q ss_pred             CCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCe
Q psy7108          35 ARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQ  114 (703)
Q Consensus        35 g~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~  114 (703)
                      +.++  +.+.+|...|++++|+|  ++.+|++|+.|++|++||+.+++....+..|...|.+++|+|+++.|++|+.|++
T Consensus        55 ~~~~--~~~~~h~~~v~~~~~s~--dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~  130 (319)
T 3frx_A           55 GVPV--RSFKGHSHIVQDCTLTA--DGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKT  130 (319)
T ss_dssp             EEEE--EEEECCSSCEEEEEECT--TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSC
T ss_pred             cccc--eEEeCCcccEEEEEECC--CCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCe
Confidence            3455  78999999999999999  9999999999999999999999888888889999999999999999999999999


Q ss_pred             EEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC------CCEEEEEecCCcEEEEECCCCceE
Q psy7108         115 LIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD------GSCILAAGQSKYICIYSSREGILL  188 (703)
Q Consensus       115 I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd------g~~l~s~s~dg~I~lwD~~~~~~~  188 (703)
                      |++||++ ++.+..+.+|..                    .|.+++|+|.      +..+++++.|+.|++||+++++..
T Consensus       131 i~vwd~~-~~~~~~~~~h~~--------------------~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~  189 (319)
T 3frx_A          131 IKVWTIK-GQCLATLLGHND--------------------WVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIE  189 (319)
T ss_dssp             EEEEETT-SCEEEEECCCSS--------------------CEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEE
T ss_pred             EEEEECC-CCeEEEEeccCC--------------------cEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhh
Confidence            9999996 556667766654                    8999999985      458999999999999999998887


Q ss_pred             EEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEE
Q psy7108         189 KKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVA  268 (703)
Q Consensus       189 ~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s  268 (703)
                      ..+..|        ...|.+++|+|+|+++++++.++      .|++||+.+++.+..+..+ ..|.+++|+|++.++++
T Consensus       190 ~~~~~h--------~~~v~~~~~sp~g~~l~s~~~dg------~i~iwd~~~~~~~~~~~~~-~~v~~~~~sp~~~~la~  254 (319)
T 3frx_A          190 ADFIGH--------NSNINTLTASPDGTLIASAGKDG------EIMLWNLAAKKAMYTLSAQ-DEVFSLAFSPNRYWLAA  254 (319)
T ss_dssp             EEECCC--------CSCEEEEEECTTSSEEEEEETTC------EEEEEETTTTEEEEEEECC-SCEEEEEECSSSSEEEE
T ss_pred             eeecCC--------CCcEEEEEEcCCCCEEEEEeCCC------eEEEEECCCCcEEEEecCC-CcEEEEEEcCCCCEEEE
Confidence            776644        44899999999999999888764      8999999999887777654 67999999999999999


Q ss_pred             EeCCCEEEEEcCCCceecc--------------eeeeEEEccchhhhHhhcCCcceEEEEEEecCc
Q psy7108         269 ATTEGVHIYSLDSGYVFDP--------------FLLDISITPQSVKEALADKDYAKALMMSLKLNE  320 (703)
Q Consensus       269 ~s~Dgv~iwd~~~~~~~~~--------------~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~  320 (703)
                      ++.+++++|+++.+.....              ...+++|+|++  .++++++.|+.+++ |++..
T Consensus       255 ~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg--~~l~sg~~Dg~i~v-Wd~~t  317 (319)
T 3frx_A          255 ATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADG--QTLFAGYTDNVIRV-WQVMT  317 (319)
T ss_dssp             EETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTS--SEEEEEETTSCEEE-EEEEE
T ss_pred             EcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCC--CEEEEeecCceEEE-EEEee
Confidence            9988899999887654322              23579999999  89999999999998 98754

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=2.1e-31  Score=280.00  Aligned_cols=252  Identities=15%  Similarity=0.255  Sum_probs=217.1

Q ss_pred             ccCCCccccccccCCCcCeEEEEEcCC--CCCCEEEEEeCCCcEEEEEcCCCcee--EEEecCCCcEEEEEEecCCCEEE
Q psy7108          32 DMAARVLKPEVLSGHEGPVSCIEFSPV--LSSTGMVSASWDKTVKLWNAVETDTQ--HETIQLLSDALCVAYKPDGTEIV  107 (703)
Q Consensus        32 d~tg~~~~~~~l~gH~~~V~~l~~sp~--~dg~~L~sgs~Dg~V~iWd~~~~~~~--~~~~~~~~~V~~v~~spdg~~la  107 (703)
                      +..|.+.  +.+.+|.++|++++|+|.  .++.+|+||+.|++|++|++.++...  ..+.+|...|.+++|+|++..++
T Consensus        19 ~~~g~~~--~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~   96 (321)
T 3ow8_A           19 NQYGILF--KQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAA   96 (321)
T ss_dssp             --CEEEE--EETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEE
T ss_pred             hhhhhee--eecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEE
Confidence            4456666  788899999999999982  13569999999999999999776432  34567999999999999999999


Q ss_pred             EEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCce
Q psy7108         108 VATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGIL  187 (703)
Q Consensus       108 s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~  187 (703)
                      +++.|++|++||+++++.+..+..+..                    .+.+++|+|++++|++++.|+.|++||+++++.
T Consensus        97 s~s~D~~i~lWd~~~~~~~~~~~~~~~--------------------~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~  156 (321)
T 3ow8_A           97 SSSLDAHIRLWDLENGKQIKSIDAGPV--------------------DAWTLAFSPDSQYLATGTHVGKVNIFGVESGKK  156 (321)
T ss_dssp             EEETTSEEEEEETTTTEEEEEEECCTT--------------------CCCCEEECTTSSEEEEECTTSEEEEEETTTCSE
T ss_pred             EEeCCCcEEEEECCCCCEEEEEeCCCc--------------------cEEEEEECCCCCEEEEEcCCCcEEEEEcCCCce
Confidence            999999999999999999988877654                    678899999999999999999999999999988


Q ss_pred             EEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEE
Q psy7108         188 LKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWV  267 (703)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~  267 (703)
                      ...+..+.        ..+.+++|+|+|+++++++.++      .|++||+++++.+..+.+|...|.+++|+|++++|+
T Consensus       157 ~~~~~~~~--------~~v~~~~~spdg~~lasg~~dg------~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~  222 (321)
T 3ow8_A          157 EYSLDTRG--------KFILSIAYSPDGKYLASGAIDG------IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLV  222 (321)
T ss_dssp             EEEEECSS--------SCEEEEEECTTSSEEEEEETTS------CEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEE
T ss_pred             eEEecCCC--------ceEEEEEECCCCCEEEEEcCCC------eEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEE
Confidence            87776544        3789999999999999988764      899999999999999999999999999999999999


Q ss_pred             EEeCCC-EEEEEcCCCceecce------eeeEEEccchhhhHhhcCCcceEEEEEEecCchh
Q psy7108         268 AATTEG-VHIYSLDSGYVFDPF------LLDISITPQSVKEALADKDYAKALMMSLKLNEQG  322 (703)
Q Consensus       268 s~s~Dg-v~iwd~~~~~~~~~~------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~~  322 (703)
                      +++.|+ |++||+.++.....+      ..+++|+|++  ..+++++.|+.+++ |++....
T Consensus       223 s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~--~~l~s~s~D~~v~i-wd~~~~~  281 (321)
T 3ow8_A          223 TASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDD--THFVSSSSDKSVKV-WDVGTRT  281 (321)
T ss_dssp             EECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS--SEEEEEETTSCEEE-EETTTTE
T ss_pred             EEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCC--CEEEEEeCCCcEEE-EeCCCCE
Confidence            999999 999999988764433      4679999999  78999999999999 9987543

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=100.00  E-value=1.4e-30  Score=275.96  Aligned_cols=248  Identities=15%  Similarity=0.181  Sum_probs=215.5

Q ss_pred             ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc----eeEEEecCCCcEEEEEEecC
Q psy7108          28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD----TQHETIQLLSDALCVAYKPD  102 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~----~~~~~~~~~~~V~~v~~spd  102 (703)
                      +++|| .+++.+  ..+..|...|.+++|+|  ++++|++|+.|+.+++|++.+..    .......|.+.|.+++|+++
T Consensus        79 v~iWd~~~~~~~--~~~~~~~~~v~~~~~s~--~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~  154 (340)
T 1got_B           79 LIIWDSYTTNKV--HAIPLRSSWVMTCAYAP--SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDD  154 (340)
T ss_dssp             EEEEETTTCCEE--EEEECSSSCEEEEEECT--TSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEET
T ss_pred             EEEEECCCCCcc--eEeecCCccEEEEEECC--CCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCC
Confidence            66777 567777  88999999999999999  99999999999999999998753    23455679999999999988


Q ss_pred             CCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEEC
Q psy7108         103 GTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSS  182 (703)
Q Consensus       103 g~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~  182 (703)
                      +. +++++.|++|++||+++++.+..+.+|..                    .|.+++|+|+++++++|+.|+.|++||+
T Consensus       155 ~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~--------------------~v~~~~~~~~~~~l~sg~~d~~v~~wd~  213 (340)
T 1got_B          155 NQ-IVTSSGDTTCALWDIETGQQTTTFTGHTG--------------------DVMSLSLAPDTRLFVSGACDASAKLWDV  213 (340)
T ss_dssp             TE-EEEEETTSCEEEEETTTTEEEEEECCCSS--------------------CEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred             Cc-EEEEECCCcEEEEECCCCcEEEEEcCCCC--------------------ceEEEEECCCCCEEEEEeCCCcEEEEEC
Confidence            75 88999999999999999999988888765                    8999999999999999999999999999


Q ss_pred             CCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC--CccceEEEEEc
Q psy7108         183 REGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK--PEVRVFCVKFS  260 (703)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~--h~~~V~~l~~s  260 (703)
                      +++.+...+..|.        ..|.+++|+|+++.+++++.++      .|++||+++++....+..  +...|.+++|+
T Consensus       214 ~~~~~~~~~~~h~--------~~v~~v~~~p~~~~l~s~s~d~------~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s  279 (340)
T 1got_B          214 REGMCRQTFTGHE--------SDINAICFFPNGNAFATGSDDA------TCRLFDLRADQELMTYSHDNIICGITSVSFS  279 (340)
T ss_dssp             TTCSEEEEECCCS--------SCEEEEEECTTSSEEEEEETTS------CEEEEETTTTEEEEEECCTTCCSCEEEEEEC
T ss_pred             CCCeeEEEEcCCc--------CCEEEEEEcCCCCEEEEEcCCC------cEEEEECCCCcEEEEEccCCcccceEEEEEC
Confidence            9999888876544        4899999999999999888764      899999998876655542  33579999999


Q ss_pred             CCCCEEEEEeCCC-EEEEEcCCCceecce------eeeEEEccchhhhHhhcCCcceEEEEEEe
Q psy7108         261 PTGQAWVAATTEG-VHIYSLDSGYVFDPF------LLDISITPQSVKEALADKDYAKALMMSLK  317 (703)
Q Consensus       261 pdg~~l~s~s~Dg-v~iwd~~~~~~~~~~------~~~~~~spd~~~~~l~sg~~~~~l~la~~  317 (703)
                      |+|++|++|+.|+ |++||+.++.....+      +.+++|+|++  ..+++++.|+.+++ |+
T Consensus       280 ~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg--~~l~s~s~D~~i~i-Wd  340 (340)
T 1got_B          280 KSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDG--MAVATGSWDSFLKI-WN  340 (340)
T ss_dssp             TTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS--SCEEEEETTSCEEE-EC
T ss_pred             CCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCC--CEEEEEcCCccEEe-cC
Confidence            9999999999999 999999887764433      4679999999  88999999999988 64

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=100.00  E-value=1.1e-30  Score=276.76  Aligned_cols=241  Identities=15%  Similarity=0.222  Sum_probs=213.8

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEc
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDV  120 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~  120 (703)
                      +++.+|.++|++++|+|  ++++|++|+.||+|++||+.++.....+..|...|.+++|+|++++|++|+.|+.|++||+
T Consensus        49 ~~l~gH~~~v~~~~~s~--d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~  126 (340)
T 1got_B           49 RTLRGHLAKIYAMHWGT--DSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNL  126 (340)
T ss_dssp             EEECCCSSCEEEEEECT--TSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEET
T ss_pred             eeecCCCCceEEEEECC--CCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence            78999999999999999  9999999999999999999998888888889999999999999999999999999999999


Q ss_pred             CCCc----EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccC
Q psy7108         121 ESAA----QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQN  196 (703)
Q Consensus       121 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~  196 (703)
                      .+++    ....+.+|.                    +.|.++.|++++. +++++.|++|++||+++++++..+..|. 
T Consensus       127 ~~~~~~~~~~~~~~~h~--------------------~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~-  184 (340)
T 1got_B          127 KTREGNVRVSRELAGHT--------------------GYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHT-  184 (340)
T ss_dssp             TTCSBSCEEEEEEECCS--------------------SCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCS-
T ss_pred             ccCCCcceeEEEecCCC--------------------ccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCC-
Confidence            8753    344555554                    4899999998875 8899999999999999999888876544 


Q ss_pred             CccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EE
Q psy7108         197 KSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VH  275 (703)
Q Consensus       197 ~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~  275 (703)
                             ..|.+++|+|+++.+++++.++      .|++||++++++...+.+|...|.+++|+|++++|++++.|+ |+
T Consensus       185 -------~~v~~~~~~~~~~~l~sg~~d~------~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~  251 (340)
T 1got_B          185 -------GDVMSLSLAPDTRLFVSGACDA------SAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCR  251 (340)
T ss_dssp             -------SCEEEEEECTTSSEEEEEETTS------CEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred             -------CceEEEEECCCCCEEEEEeCCC------cEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEE
Confidence                   4899999999999988887764      899999999999999999999999999999999999999999 99


Q ss_pred             EEEcCCCceecce--------eeeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108         276 IYSLDSGYVFDPF--------LLDISITPQSVKEALADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       276 iwd~~~~~~~~~~--------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~  321 (703)
                      +||+.+++....+        ..+++|+|++  .++++++.++.+.+ |++...
T Consensus       252 iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g--~~l~~g~~d~~i~v-wd~~~~  302 (340)
T 1got_B          252 LFDLRADQELMTYSHDNIICGITSVSFSKSG--RLLLAGYDDFNCNV-WDALKA  302 (340)
T ss_dssp             EEETTTTEEEEEECCTTCCSCEEEEEECTTS--SEEEEEETTSEEEE-EETTTC
T ss_pred             EEECCCCcEEEEEccCCcccceEEEEECCCC--CEEEEECCCCeEEE-EEcccC
Confidence            9999987764332        3678999999  88999999999998 987543

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=99.97  E-value=6.7e-31  Score=280.45  Aligned_cols=248  Identities=15%  Similarity=0.178  Sum_probs=197.5

Q ss_pred             cccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCcee----EEEecCCCcEEEEEEecCCCEEEEEECCCeEEE
Q psy7108          42 VLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQ----HETIQLLSDALCVAYKPDGTEIVVATLDGQLIM  117 (703)
Q Consensus        42 ~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~----~~~~~~~~~V~~v~~spdg~~las~s~dg~I~v  117 (703)
                      ...+|...|++++|+|  ++. +++++.||+|++||+.+++..    .....|.+.|.+++|+|++++|++|+.|+.|++
T Consensus        89 ~~~~~~~~V~~~~~s~--d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~i  165 (357)
T 4g56_B           89 AGVQTEAGVTDVAWVS--EKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKV  165 (357)
T ss_dssp             EEEECSSCEEEEEEET--TTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEE
T ss_pred             ccCCCCCCEEEEEEcC--CCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEE
Confidence            4457999999999999  765 556788999999999877533    233468999999999999999999999999999


Q ss_pred             EEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCC-EEEEEecCCcEEEEECCCCceEEEEEeccC
Q psy7108         118 FDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGS-CILAAGQSKYICIYSSREGILLKKFTITQN  196 (703)
Q Consensus       118 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~-~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~  196 (703)
                      ||+++++.+..+.+|..                    .|++++|+|++. .+++++.|+.|++||++++++...+..   
T Consensus       166 wd~~~~~~~~~~~~h~~--------------------~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~---  222 (357)
T 4g56_B          166 WDLSQKAVLKSYNAHSS--------------------EVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDF---  222 (357)
T ss_dssp             EETTTTEEEEEECCCSS--------------------CEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCC---
T ss_pred             EECCCCcEEEEEcCCCC--------------------CEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeee---
Confidence            99999999999988765                    899999999875 788999999999999999876654432   


Q ss_pred             CccccccccceeeeeccCCC-EEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCC-CEEEEEeCCC-
Q psy7108         197 KSLDGINDFINRRKMTEFGN-VSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTG-QAWVAATTEG-  273 (703)
Q Consensus       197 ~~~~~~~~~v~~~~~spdg~-~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg-~~l~s~s~Dg-  273 (703)
                         ..+...+.+++|+|++. .+++++.+      ..|++||++++++...+.+|...|++++|+|++ ++|++++.|+ 
T Consensus       223 ---~~~~~~v~~v~~sp~~~~~la~g~~d------~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~  293 (357)
T 4g56_B          223 ---CASDTIPTSVTWHPEKDDTFACGDET------GNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCT  293 (357)
T ss_dssp             ---TTCCSCEEEEEECTTSTTEEEEEESS------SCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSC
T ss_pred             ---ccccccccchhhhhcccceEEEeecc------cceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCE
Confidence               22345789999999865 45555544      379999999999999999999999999999997 5789999999 


Q ss_pred             EEEEEcCCCceecc-----eeeeEEEcc-chhhhHhhcCCcceEEEEEEecCchhHHHHH
Q psy7108         274 VHIYSLDSGYVFDP-----FLLDISITP-QSVKEALADKDYAKALMMSLKLNEQGLIIHV  327 (703)
Q Consensus       274 v~iwd~~~~~~~~~-----~~~~~~~sp-d~~~~~l~sg~~~~~l~la~~l~~~~~~~~v  327 (703)
                      |+|||+++++.+..     .+.+++|+| ++  ..+++++.|+.+++ |++........+
T Consensus       294 i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~--~~l~s~s~Dg~v~i-W~~~~~~~~~~~  350 (357)
T 4g56_B          294 VAVLDADFSEVFRDLSHRDFVTGVAWSPLDH--SKFTTVGWDHKVLH-HHLPSEGRTENL  350 (357)
T ss_dssp             EEEECTTSCEEEEECCCSSCEEEEEECSSST--TEEEEEETTSCEEE-EECC--------
T ss_pred             EEEEECCCCcEeEECCCCCCEEEEEEeCCCC--CEEEEEcCCCeEEE-EECCCCCccccc
Confidence            99999999887543     357799998 67  78999999999999 998766544444

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=99.97  E-value=1.3e-29  Score=270.21  Aligned_cols=249  Identities=14%  Similarity=0.206  Sum_probs=215.3

Q ss_pred             ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCC------ceeEEEecCCCcEEEEEEe
Q psy7108          28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVET------DTQHETIQLLSDALCVAYK  100 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~------~~~~~~~~~~~~V~~v~~s  100 (703)
                      +++|| .+++..  ..+..|...|.+++|+|  ++..|++|+.|+.+++|++...      .....+..|.+.|.+++|+
T Consensus        88 v~vWd~~~~~~~--~~~~~~~~~v~~~~~sp--~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~  163 (354)
T 2pbi_B           88 VIVWDSFTTNKE--HAVTMPCTWVMACAYAP--SGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFT  163 (354)
T ss_dssp             EEEEETTTCCEE--EEEECSSSCCCEEEECT--TSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEEC
T ss_pred             EEEEECCCCCcc--eEEecCCCCEEEEEECC--CCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEe
Confidence            66777 467777  78889999999999999  9999999999999999998643      1345566799999999999


Q ss_pred             cCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC--CCCEEEEEecCCcEE
Q psy7108         101 PDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA--DGSCILAAGQSKYIC  178 (703)
Q Consensus       101 pdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp--dg~~l~s~s~dg~I~  178 (703)
                      |++..|++++.|++|++||+++++.+..+.+|..                    .|.+++|+|  +++.|++|+.|++|+
T Consensus       164 ~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~--------------------~v~~~~~~~~~~g~~l~sgs~Dg~v~  223 (354)
T 2pbi_B          164 NSDMQILTASGDGTCALWDVESGQLLQSFHGHGA--------------------DVLCLDLAPSETGNTFVSGGCDKKAM  223 (354)
T ss_dssp             SSSSEEEEEETTSEEEEEETTTCCEEEEEECCSS--------------------CEEEEEECCCSSCCEEEEEETTSCEE
T ss_pred             CCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCC--------------------CeEEEEEEeCCCCCEEEEEeCCCeEE
Confidence            9999999999999999999999999999988765                    899999987  578999999999999


Q ss_pred             EEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC--CccceEE
Q psy7108         179 IYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK--PEVRVFC  256 (703)
Q Consensus       179 lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~--h~~~V~~  256 (703)
                      +||+++++++..+..|.        ..|++++|+|++..+++++.++      .|++||+++++....+..  +...+.+
T Consensus       224 ~wd~~~~~~~~~~~~h~--------~~v~~v~~~p~~~~l~s~s~D~------~v~lwd~~~~~~~~~~~~~~~~~~~~~  289 (354)
T 2pbi_B          224 VWDMRSGQCVQAFETHE--------SDVNSVRYYPSGDAFASGSDDA------TCRLYDLRADREVAIYSKESIIFGASS  289 (354)
T ss_dssp             EEETTTCCEEEEECCCS--------SCEEEEEECTTSSEEEEEETTS------CEEEEETTTTEEEEEECCTTCCSCEEE
T ss_pred             EEECCCCcEEEEecCCC--------CCeEEEEEeCCCCEEEEEeCCC------eEEEEECCCCcEEEEEcCCCcccceeE
Confidence            99999999988876544        4899999999999999888764      899999998876655543  3457899


Q ss_pred             EEEcCCCCEEEEEeCCC-EEEEEcCCCceecce------eeeEEEccchhhhHhhcCCcceEEEEEEe
Q psy7108         257 VKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPF------LLDISITPQSVKEALADKDYAKALMMSLK  317 (703)
Q Consensus       257 l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~------~~~~~~spd~~~~~l~sg~~~~~l~la~~  317 (703)
                      ++|+|+|++|++++.|+ |++||+.+++....+      ..+++|+|++  .++++++.|+.+++ |.
T Consensus       290 ~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg--~~l~sgs~D~~v~v-W~  354 (354)
T 2pbi_B          290 VDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDG--TAFCSGSWDHTLRV-WA  354 (354)
T ss_dssp             EEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTS--SCEEEEETTSEEEE-EC
T ss_pred             EEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCC--CEEEEEcCCCCEEe-cC
Confidence            99999999999999999 999999888764433      4679999999  89999999999988 63

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=99.97  E-value=7.2e-30  Score=271.05  Aligned_cols=260  Identities=13%  Similarity=0.195  Sum_probs=203.8

Q ss_pred             ceeeccCCCc-c-ccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc--eeEEEecCCCcEEEEEEecCC
Q psy7108          28 VKKGDMAARV-L-KPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD--TQHETIQLLSDALCVAYKPDG  103 (703)
Q Consensus        28 v~~~d~tg~~-~-~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~--~~~~~~~~~~~V~~v~~spdg  103 (703)
                      +++|+..+.. . ......+|.+.|++++|+|  ++++|++|+.|+++++|++..+.  ....+..|...|.+++|+|++
T Consensus        40 i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp--~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~  117 (345)
T 3fm0_A           40 IRIWGTEGDSWICKSVLSEGHQRTVRKVAWSP--CGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSG  117 (345)
T ss_dssp             EEEEEEETTEEEEEEEECSSCSSCEEEEEECT--TSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTS
T ss_pred             EEEEEcCCCcceeeeeeccccCCcEEEEEECC--CCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCC
Confidence            6777754432 1 0123478999999999999  99999999999999999997764  345566799999999999999


Q ss_pred             CEEEEEECCCeEEEEEcCCCcE---EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEE
Q psy7108         104 TEIVVATLDGQLIMFDVESAAQ---VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIY  180 (703)
Q Consensus       104 ~~las~s~dg~I~vwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lw  180 (703)
                      ++|++|+.|++|++||++++..   +..+.+|.                    ..|.+++|+|++++|++++.|++|++|
T Consensus       118 ~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~--------------------~~v~~~~~~p~~~~l~s~s~d~~i~~w  177 (345)
T 3fm0_A          118 NLLATCSRDKSVWVWEVDEEDEYECVSVLNSHT--------------------QDVKHVVWHPSQELLASASYDDTVKLY  177 (345)
T ss_dssp             SEEEEEETTSCEEEEEECTTSCEEEEEEECCCC--------------------SCEEEEEECSSSSCEEEEETTSCEEEE
T ss_pred             CEEEEEECCCeEEEEECCCCCCeEEEEEecCcC--------------------CCeEEEEECCCCCEEEEEeCCCcEEEE
Confidence            9999999999999999987643   44455554                    389999999999999999999999999


Q ss_pred             ECCCCceE--EEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCc---------------c
Q psy7108         181 SSREGILL--KKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGD---------------M  243 (703)
Q Consensus       181 D~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~---------------~  243 (703)
                      |.+++...  .++.        +|...|.+++|+|+|+++++++.++      .|++||.....               +
T Consensus       178 ~~~~~~~~~~~~~~--------~h~~~v~~l~~sp~g~~l~s~s~D~------~v~iW~~~~~~~~~~~~~~~~~~~~~~  243 (345)
T 3fm0_A          178 REEEDDWVCCATLE--------GHESTVWSLAFDPSGQRLASCSDDR------TVRIWRQYLPGNEQGVACSGSDPSWKC  243 (345)
T ss_dssp             EEETTEEEEEEEEC--------CCSSCEEEEEECTTSSEEEEEETTS------CEEEEEEECTTCTTCCCCC---CEEEE
T ss_pred             EecCCCEEEEEEec--------CCCCceEEEEECCCCCEEEEEeCCC------eEEEeccccCCCCccceeeccCCccce
Confidence            99887543  3443        4556899999999999999888764      89999864321               1


Q ss_pred             ceeecC-CccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCce---------------ecceeeeEEEccchhhhHhhcC
Q psy7108         244 AARVLK-PEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYV---------------FDPFLLDISITPQSVKEALADK  306 (703)
Q Consensus       244 ~~~~~~-h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~---------------~~~~~~~~~~spd~~~~~l~sg  306 (703)
                      +..+.+ |...|.+++|+|++..|++++.|+ |++|+...+..               +...+.+++|+|++ ..+++++
T Consensus       244 ~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~-~~~laS~  322 (345)
T 3fm0_A          244 ICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKE-PGLLASC  322 (345)
T ss_dssp             EEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSS-TTEEEEE
T ss_pred             eEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCC-ceEEEEc
Confidence            223333 788999999999999999999999 99999876431               12335679999986 1378999


Q ss_pred             CcceEEEEEEecCchhHHH
Q psy7108         307 DYAKALMMSLKLNEQGLII  325 (703)
Q Consensus       307 ~~~~~l~la~~l~~~~~~~  325 (703)
                      +.|+.+++ |++...+.+.
T Consensus       323 s~Dg~v~~-W~~~~~~~~~  340 (345)
T 3fm0_A          323 SDDGEVAF-WKYQRPEGLH  340 (345)
T ss_dssp             ETTSCEEE-EEECC-----
T ss_pred             CCCCcEEE-EEecCCCCcc
Confidence            99999999 9998765443

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=99.97  E-value=6e-30  Score=272.73  Aligned_cols=242  Identities=17%  Similarity=0.285  Sum_probs=211.3

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEc
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDV  120 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~  120 (703)
                      +++.+|.++|++++|+|  ++.+|+||+.||+|++||..++........|...|.+++|+|+|+.+++++.|+.+++|++
T Consensus        58 ~~l~gH~~~V~~~~~s~--d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~  135 (354)
T 2pbi_B           58 RTLKGHGNKVLCMDWCK--DKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPL  135 (354)
T ss_dssp             EEEECCSSCEEEEEECT--TSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEEC
T ss_pred             EEecCCCCeEEEEEECC--CCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEE
Confidence            78899999999999999  9999999999999999999988877777788899999999999999999999999999998


Q ss_pred             CCCc------EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEec
Q psy7108         121 ESAA------QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTIT  194 (703)
Q Consensus       121 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~  194 (703)
                      ....      ....+.+                    |.+.|.+++|+|+++.|++++.|++|++||+++++++..+..|
T Consensus       136 ~~~~~~~~~~~~~~~~~--------------------h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h  195 (354)
T 2pbi_B          136 TFDKNENMAAKKKSVAM--------------------HTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGH  195 (354)
T ss_dssp             CCCTTCCSGGGCEEEEE--------------------CSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred             eccccccccccceeeec--------------------cCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCC
Confidence            6532      1223333                    4558999999999999999999999999999999999888765


Q ss_pred             cCCccccccccceeeeecc--CCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCC
Q psy7108         195 QNKSLDGINDFINRRKMTE--FGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTE  272 (703)
Q Consensus       195 ~~~~~~~~~~~v~~~~~sp--dg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~D  272 (703)
                      ..        .|.+++++|  +|+.+++++.++      .|++||+++++++..+..|...|.+++|+|+++.|++++.|
T Consensus       196 ~~--------~v~~~~~~~~~~g~~l~sgs~Dg------~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D  261 (354)
T 2pbi_B          196 GA--------DVLCLDLAPSETGNTFVSGGCDK------KAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDD  261 (354)
T ss_dssp             SS--------CEEEEEECCCSSCCEEEEEETTS------CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             CC--------CeEEEEEEeCCCCCEEEEEeCCC------eEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCC
Confidence            54        788888887  567888877664      89999999999999999999999999999999999999999


Q ss_pred             C-EEEEEcCCCceecce--------eeeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108         273 G-VHIYSLDSGYVFDPF--------LLDISITPQSVKEALADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       273 g-v~iwd~~~~~~~~~~--------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~  321 (703)
                      + |++||+.++.....+        ...++|+|++  .++++++.++.+++ |++...
T Consensus       262 ~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g--~~l~~g~~d~~i~v-wd~~~~  316 (354)
T 2pbi_B          262 ATCRLYDLRADREVAIYSKESIIFGASSVDFSLSG--RLLFAGYNDYTINV-WDVLKG  316 (354)
T ss_dssp             SCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTS--SEEEEEETTSCEEE-EETTTC
T ss_pred             CeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCC--CEEEEEECCCcEEE-EECCCC
Confidence            9 999999887654322        2568999999  88999999999999 987544

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=99.97  E-value=6.7e-30  Score=270.93  Aligned_cols=242  Identities=18%  Similarity=0.235  Sum_probs=197.1

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEc
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDV  120 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~  120 (703)
                      ..+.+|...|++++|+|  ++.++++|+.|++|++||+.+++....+..|...|.+++|+|++++|++++.|++|++||+
T Consensus        70 ~~l~~h~~~V~~~~~~~--~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~  147 (343)
T 2xzm_R           70 KALTGHNHFVSDLALSQ--ENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNI  147 (343)
T ss_dssp             EEECCCSSCEEEEEECS--STTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEES
T ss_pred             chhccCCCceEEEEECC--CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEec
Confidence            67899999999999999  9999999999999999999999888888889999999999999999999999999999999


Q ss_pred             CCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCC----------CEEEEEecCCcEEEEECCCCceEEE
Q psy7108         121 ESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADG----------SCILAAGQSKYICIYSSREGILLKK  190 (703)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg----------~~l~s~s~dg~I~lwD~~~~~~~~~  190 (703)
                      ... .......                 ...|...|.+++|+|++          .++++++.|+.|++||. .......
T Consensus       148 ~~~-~~~~~~~-----------------~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~  208 (343)
T 2xzm_R          148 LGE-CKFSSAE-----------------KENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYT  208 (343)
T ss_dssp             SSC-EEEECCT-----------------TTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEE
T ss_pred             cCC-ceeeeec-----------------ccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEE
Confidence            743 2222221                 11245589999999987          78999999999999994 4555556


Q ss_pred             EEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEe
Q psy7108         191 FTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAAT  270 (703)
Q Consensus       191 ~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s  270 (703)
                      +..|        ...|.+++|+|+|+++++++.++      .|++||+.+.........+...|.+++|+|+++++++++
T Consensus       209 ~~~h--------~~~v~~~~~s~~g~~l~sgs~dg------~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~~  274 (343)
T 2xzm_R          209 FKAH--------ESNVNHLSISPNGKYIATGGKDK------KLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVGT  274 (343)
T ss_dssp             EECC--------SSCEEEEEECTTSSEEEEEETTC------EEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEEE
T ss_pred             EcCc--------cccceEEEECCCCCEEEEEcCCC------eEEEEECCCCcccceeecCCCcEEEEEECCCCCEEEEEC
Confidence            5544        44899999999999999988764      899999954433333333456799999999999887766


Q ss_pred             CCCEEEEEcCCCceec-------------------ceeeeEEEccchhhhHhhcCCcceEEEEEEecCc
Q psy7108         271 TEGVHIYSLDSGYVFD-------------------PFLLDISITPQSVKEALADKDYAKALMMSLKLNE  320 (703)
Q Consensus       271 ~Dgv~iwd~~~~~~~~-------------------~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~  320 (703)
                      .+++++|++.+++...                   ....+++|+|++  ..+++++.|+.+++ |++..
T Consensus       275 d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g--~~l~sg~~Dg~v~~-w~~~~  340 (343)
T 2xzm_R          275 DQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALG--KKLFAGFTDGVIRT-FSFET  340 (343)
T ss_dssp             SSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSS--CCEEEEETTSEEEE-EEEEE
T ss_pred             CCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCC--CeEEEecCCceEEE-EEEEc
Confidence            5559999998765322                   123579999999  88999999999998 88653

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=99.97  E-value=3.9e-30  Score=272.94  Aligned_cols=222  Identities=11%  Similarity=0.131  Sum_probs=181.0

Q ss_pred             ceeec-cCCCcccc--ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCC
Q psy7108          28 VKKGD-MAARVLKP--EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGT  104 (703)
Q Consensus        28 v~~~d-~tg~~~~~--~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~  104 (703)
                      +++|| .+++++..  ..+.+|.+.|++++|+|  ++++|++|+.|++|++||+.+++....+..|.+.|.+++|+|++.
T Consensus       105 v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~sp--dg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~  182 (344)
T 4gqb_B          105 VELWELDENETLIVSKFCKYEHDDIVSTVSVLS--SGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKD  182 (344)
T ss_dssp             EEEEEECTTSSCEEEEEEEECCSSCEEEEEECT--TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCT
T ss_pred             EEEEeccCCCceeEeeccccCCCCCEEEEEECC--CCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCC
Confidence            45555 35655410  23458999999999999  999999999999999999999988888888999999999999985


Q ss_pred             -EEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC-CCEEEEEecCCcEEEEEC
Q psy7108         105 -EIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD-GSCILAAGQSKYICIYSS  182 (703)
Q Consensus       105 -~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd-g~~l~s~s~dg~I~lwD~  182 (703)
                       .|++++.|++|++||+++++....+..+.                  +...+.+++|+|+ +++|++|+.|++|++||+
T Consensus       183 ~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~------------------~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~  244 (344)
T 4gqb_B          183 SVFLSCSEDNRILLWDTRCPKPASQIGCSA------------------PGYLPTSLAWHPQQSEVFVFGDENGTVSLVDT  244 (344)
T ss_dssp             TEEEEEETTSCEEEEETTSSSCEEECC----------------------CCCEEEEEECSSCTTEEEEEETTSEEEEEES
T ss_pred             Cceeeeccccccccccccccceeeeeecce------------------eeccceeeeecCCCCcceEEeccCCcEEEEEC
Confidence             78999999999999999998887765432                  2336899999995 578889999999999999


Q ss_pred             CCCceEEEEEeccCCccccccccceeeeeccCCC-EEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcC
Q psy7108         183 REGILLKKFTITQNKSLDGINDFINRRKMTEFGN-VSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSP  261 (703)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~-~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~sp  261 (703)
                      ++++++.++..|..        .|++++|+|++. ++++++.+      +.|++||+.+++.. .+.+|...|++++|+|
T Consensus       245 ~~~~~~~~~~~h~~--------~v~~v~fsp~g~~~lasgs~D------~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp  309 (344)
T 4gqb_B          245 KSTSCVLSSAVHSQ--------CVTGLVFSPHSVPFLASLSED------CSLAVLDSSLSELF-RSQAHRDFVRDATWSP  309 (344)
T ss_dssp             CC--CCEEEECCSS--------CEEEEEECSSSSCCEEEEETT------SCEEEECTTCCEEE-EECCCSSCEEEEEECS
T ss_pred             CCCcEEEEEcCCCC--------CEEEEEEccCCCeEEEEEeCC------CeEEEEECCCCcEE-EEcCCCCCEEEEEEeC
Confidence            99999888876554        899999999985 55565554      38999999988754 5678999999999999


Q ss_pred             CCCE-EEEEeCCC-EEEEEcCCCce
Q psy7108         262 TGQA-WVAATTEG-VHIYSLDSGYV  284 (703)
Q Consensus       262 dg~~-l~s~s~Dg-v~iwd~~~~~~  284 (703)
                      +++. |++++.|+ |++|++++...
T Consensus       310 ~~~~llas~s~D~~v~~w~v~~~~~  334 (344)
T 4gqb_B          310 LNHSLLTTVGWDHQVVHHVVPTEPL  334 (344)
T ss_dssp             SSTTEEEEEETTSCEEEEECCC---
T ss_pred             CCCeEEEEEcCCCeEEEEECCCCCC
Confidence            9875 67999999 99999987543

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=99.97  E-value=7.7e-30  Score=267.70  Aligned_cols=240  Identities=18%  Similarity=0.248  Sum_probs=202.0

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc-----eeEEEecCCCcEEEEEEecCCCEEEEEECCCeE
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD-----TQHETIQLLSDALCVAYKPDGTEIVVATLDGQL  115 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~-----~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I  115 (703)
                      .+|.||.++|++++|+|. ++++|+||+.|++|++|++....     ....+..|...|.+++|+|++++|++|+.|++|
T Consensus        11 ~~l~gH~~~V~~l~~~~~-~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v   89 (319)
T 3frx_A           11 GTLEGHNGWVTSLATSAG-QPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTL   89 (319)
T ss_dssp             EEECCCSSCEEEEEECSS-CTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred             EEEccccceEEEEEccCC-CccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEE
Confidence            688999999999999992 34899999999999999986432     244566799999999999999999999999999


Q ss_pred             EEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEecc
Q psy7108         116 IMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQ  195 (703)
Q Consensus       116 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~  195 (703)
                      ++||+++++.+..+.+|..                    .|.+++|+|++++|++|+.|++|++||++. .++..+..  
T Consensus        90 ~~wd~~~~~~~~~~~~h~~--------------------~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~-~~~~~~~~--  146 (319)
T 3frx_A           90 RLWDVATGETYQRFVGHKS--------------------DVMSVDIDKKASMIISGSRDKTIKVWTIKG-QCLATLLG--  146 (319)
T ss_dssp             EEEETTTTEEEEEEECCSS--------------------CEEEEEECTTSCEEEEEETTSCEEEEETTS-CEEEEECC--
T ss_pred             EEEECCCCCeeEEEccCCC--------------------cEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CeEEEEec--
Confidence            9999999999999988765                    899999999999999999999999999974 45555543  


Q ss_pred             CCccccccccceeeeeccCC------CEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEE
Q psy7108         196 NKSLDGINDFINRRKMTEFG------NVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAA  269 (703)
Q Consensus       196 ~~~~~~~~~~v~~~~~spdg------~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~  269 (703)
                            |...+.++.++|.+      ..+++++.++      .|++||+++++....+.+|...|.+++|+|+|++|+++
T Consensus       147 ------h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~------~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~  214 (319)
T 3frx_A          147 ------HNDWVSQVRVVPNEKADDDSVTIISAGNDK------MVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASA  214 (319)
T ss_dssp             ------CSSCEEEEEECCC------CCEEEEEETTS------CEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEE
T ss_pred             ------cCCcEEEEEEccCCCCCCCccEEEEEeCCC------EEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEE
Confidence                  44588999999854      3666666553      89999999998888889999999999999999999999


Q ss_pred             eCCC-EEEEEcCCCceecce-----eeeEEEccchhhhHhhcCCcceEEEEEEecCc
Q psy7108         270 TTEG-VHIYSLDSGYVFDPF-----LLDISITPQSVKEALADKDYAKALMMSLKLNE  320 (703)
Q Consensus       270 s~Dg-v~iwd~~~~~~~~~~-----~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~  320 (703)
                      +.|+ |++||+.+++....+     ..+++|+|++  ..++.+..++ +.+ |.++.
T Consensus       215 ~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~--~~la~~~~~~-i~v-~~~~~  267 (319)
T 3frx_A          215 GKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNR--YWLAAATATG-IKV-FSLDP  267 (319)
T ss_dssp             ETTCEEEEEETTTTEEEEEEECCSCEEEEEECSSS--SEEEEEETTE-EEE-EEETT
T ss_pred             eCCCeEEEEECCCCcEEEEecCCCcEEEEEEcCCC--CEEEEEcCCC-cEE-EEeCc
Confidence            9999 999999998775444     3679999999  6666665443 555 66543

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=99.97  E-value=2.1e-29  Score=262.97  Aligned_cols=252  Identities=23%  Similarity=0.344  Sum_probs=216.4

Q ss_pred             ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEE
Q psy7108          28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEI  106 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~l  106 (703)
                      +++|+ .+++..  ..+.+|...|.+++|+|  ++++|++|+.|+.|++||+.+++....+..|...|.+++|+|++++|
T Consensus        47 i~iw~~~~~~~~--~~~~~h~~~v~~~~~~~--~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  122 (312)
T 4ery_A           47 IKIWGAYDGKFE--KTISGHKLGISDVAWSS--DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLI  122 (312)
T ss_dssp             EEEEETTTCCEE--EEECCCSSCEEEEEECT--TSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEE
T ss_pred             EEEEeCCCcccc--hhhccCCCceEEEEEcC--CCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEE
Confidence            67777 467777  88999999999999999  99999999999999999999998888888899999999999999999


Q ss_pred             EEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCc
Q psy7108         107 VVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGI  186 (703)
Q Consensus       107 as~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~  186 (703)
                      ++|+.|+.|++||+++++.+..+..|..                    .|.+++|+|+++++++++.|+.|++||+++++
T Consensus       123 ~s~~~d~~i~iwd~~~~~~~~~~~~~~~--------------------~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~  182 (312)
T 4ery_A          123 VSGSFDESVRIWDVKTGKCLKTLPAHSD--------------------PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ  182 (312)
T ss_dssp             EEEETTSCEEEEETTTCCEEEEECCCSS--------------------CEEEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred             EEEeCCCcEEEEECCCCEEEEEecCCCC--------------------cEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc
Confidence            9999999999999999999888877654                    89999999999999999999999999999998


Q ss_pred             eEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEE--EEE-cCCC
Q psy7108         187 LLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFC--VKF-SPTG  263 (703)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~--l~~-spdg  263 (703)
                      .+..+...       +...+..++|+|+++++++++.++      .|++||+++++....+.+|...+..  ..+ .+++
T Consensus       183 ~~~~~~~~-------~~~~~~~~~~~~~~~~l~~~~~d~------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (312)
T 4ery_A          183 CLKTLIDD-------DNPPVSFVKFSPNGKYILAATLDN------TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGG  249 (312)
T ss_dssp             EEEEECCS-------SCCCEEEEEECTTSSEEEEEETTT------EEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSS
T ss_pred             eeeEEecc-------CCCceEEEEECCCCCEEEEEcCCC------eEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCC
Confidence            87766432       234788899999999999888764      8999999999888888877654322  233 4678


Q ss_pred             CEEEEEeCCC-EEEEEcCCCceecce------eeeEEEccchhhhHhhcCC--cceEEEEEEecC
Q psy7108         264 QAWVAATTEG-VHIYSLDSGYVFDPF------LLDISITPQSVKEALADKD--YAKALMMSLKLN  319 (703)
Q Consensus       264 ~~l~s~s~Dg-v~iwd~~~~~~~~~~------~~~~~~spd~~~~~l~sg~--~~~~l~la~~l~  319 (703)
                      +++++++.|| |++||+.+++....+      ...++++|++  ..+++++  .|+.+++ |+.+
T Consensus       250 ~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~--~~l~s~~~~~d~~i~~-W~~d  311 (312)
T 4ery_A          250 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE--NIIASAALENDKTIKL-WKSD  311 (312)
T ss_dssp             CEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSS--SEEEEEECTTTCCEEE-EECC
T ss_pred             cEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcC--CceEEEEccCCccEEE-ecCC
Confidence            8999999999 999999998875544      3678999999  6666654  6889998 8754

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=99.97  E-value=2.1e-29  Score=272.38  Aligned_cols=258  Identities=15%  Similarity=0.233  Sum_probs=212.0

Q ss_pred             ceeec-cCCCccccccccCCCc------------------CeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEe
Q psy7108          28 VKKGD-MAARVLKPEVLSGHEG------------------PVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETI   88 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l~gH~~------------------~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~   88 (703)
                      +++|+ .+|+.+  ..+.+|..                  .|++++|+|  ++++|++|+.|++|++||+.+++....+.
T Consensus        87 v~i~~~~~g~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~--dg~~l~s~~~d~~i~iwd~~~~~~~~~~~  162 (393)
T 1erj_A           87 TQVYRVSDGSLV--ARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSP--DGKFLATGAEDRLIRIWDIENRKIVMILQ  162 (393)
T ss_dssp             EEEEETTTCCEE--EEECC-----------------CCCCBEEEEEECT--TSSEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred             EEEEEecCCCEE--EEecCccccccccccccccccCCCceeEEEEEECC--CCCEEEEEcCCCeEEEEECCCCcEEEEEc
Confidence            55666 467766  66665542                  499999999  99999999999999999999887777777


Q ss_pred             cCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC-CCCE
Q psy7108          89 QLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA-DGSC  167 (703)
Q Consensus        89 ~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp-dg~~  167 (703)
                      .|...|.+++|+|+++.|++++.|++|++||+++++....+..+.                     .+.+++|+| ++++
T Consensus       163 ~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~---------------------~v~~~~~~~~~~~~  221 (393)
T 1erj_A          163 GHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIED---------------------GVTTVAVSPGDGKY  221 (393)
T ss_dssp             CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSS---------------------CEEEEEECSTTCCE
T ss_pred             cCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCC---------------------CcEEEEEECCCCCE
Confidence            899999999999999999999999999999999998877776433                     689999999 8999


Q ss_pred             EEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC------
Q psy7108         168 ILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG------  241 (703)
Q Consensus       168 l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~------  241 (703)
                      |++|+.|+.|++||++++..+..+.... ....+|...|.+++|+|+|+.+++++.++      .|++||+++.      
T Consensus       222 l~~~s~d~~v~iwd~~~~~~~~~~~~~~-~~~~~h~~~v~~v~~~~~g~~l~s~s~d~------~v~~wd~~~~~~~~~~  294 (393)
T 1erj_A          222 IAAGSLDRAVRVWDSETGFLVERLDSEN-ESGTGHKDSVYSVVFTRDGQSVVSGSLDR------SVKLWNLQNANNKSDS  294 (393)
T ss_dssp             EEEEETTSCEEEEETTTCCEEEEEC-------CCCSSCEEEEEECTTSSEEEEEETTS------EEEEEEC---------
T ss_pred             EEEEcCCCcEEEEECCCCcEEEeecccc-cCCCCCCCCEEEEEECCCCCEEEEEeCCC------EEEEEECCCCCCcccc
Confidence            9999999999999999998877764221 12345777999999999999999887764      8999998763      


Q ss_pred             ------ccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecce------eeeEEEcc------chhhhH
Q psy7108         242 ------DMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPF------LLDISITP------QSVKEA  302 (703)
Q Consensus       242 ------~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~------~~~~~~sp------d~~~~~  302 (703)
                            .+...+.+|...|.+++|+|++++|++++.|+ |++||..+++....+      ..++++++      ++  ..
T Consensus       295 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~--~~  372 (393)
T 1erj_A          295 KTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEY--NV  372 (393)
T ss_dssp             ------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTC--EE
T ss_pred             cCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCC--CE
Confidence                  33456678999999999999999999999999 999999998875444      35677765      55  68


Q ss_pred             hhcCCcceEEEEEEecCc
Q psy7108         303 LADKDYAKALMMSLKLNE  320 (703)
Q Consensus       303 l~sg~~~~~l~la~~l~~  320 (703)
                      +++++.|+.+++ |++..
T Consensus       373 l~sgs~Dg~i~i-W~~~~  389 (393)
T 1erj_A          373 FATGSGDCKARI-WKYKK  389 (393)
T ss_dssp             EEEEETTSEEEE-EEEEE
T ss_pred             EEEECCCCcEEE-Ccccc
Confidence            999999999999 98754

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=99.97  E-value=2.1e-29  Score=262.93  Aligned_cols=243  Identities=19%  Similarity=0.306  Sum_probs=212.8

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEc
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDV  120 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~  120 (703)
                      .++.+|.++|++++|+|  ++++|++|+.||.|++|++.+++....+..|...|.+++|+|++++|++++.|+.|++||+
T Consensus        17 ~~~~gh~~~v~~~~~s~--~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~   94 (312)
T 4ery_A           17 FTLAGHTKAVSSVKFSP--NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV   94 (312)
T ss_dssp             EEECCCSSCEEEEEECT--TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred             EEEcccCCcEEEEEECC--CCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEEC
Confidence            67899999999999999  9999999999999999999988777777789999999999999999999999999999999


Q ss_pred             CCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccc
Q psy7108         121 ESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLD  200 (703)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~  200 (703)
                      ++++.+..+.+|..                    .|.+++|+|++++|++++.|+.|++||+++++++..+..+.     
T Consensus        95 ~~~~~~~~~~~~~~--------------------~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-----  149 (312)
T 4ery_A           95 SSGKCLKTLKGHSN--------------------YVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHS-----  149 (312)
T ss_dssp             TTCCEEEEEECCSS--------------------CEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCS-----
T ss_pred             CCCcEEEEEcCCCC--------------------CEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCC-----
Confidence            99999999888765                    89999999999999999999999999999999888776544     


Q ss_pred             cccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeec-CCccceEEEEEcCCCCEEEEEeCCC-EEEEE
Q psy7108         201 GINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL-KPEVRVFCVKFSPTGQAWVAATTEG-VHIYS  278 (703)
Q Consensus       201 ~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~-~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd  278 (703)
                         ..+.+++|+|+++.+++++.++      .|++||+++++....+. .+...+..++|+|++++|++++.|+ |++||
T Consensus       150 ---~~v~~~~~~~~~~~l~~~~~d~------~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd  220 (312)
T 4ery_A          150 ---DPVSAVHFNRDGSLIVSSSYDG------LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD  220 (312)
T ss_dssp             ---SCEEEEEECTTSSEEEEEETTS------CEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEE
T ss_pred             ---CcEEEEEEcCCCCEEEEEeCCC------cEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEE
Confidence               4899999999999998888764      89999999988776654 4567799999999999999999999 99999


Q ss_pred             cCCCceeccee--------eeEEEc-cchhhhHhhcCCcceEEEEEEecCchh
Q psy7108         279 LDSGYVFDPFL--------LDISIT-PQSVKEALADKDYAKALMMSLKLNEQG  322 (703)
Q Consensus       279 ~~~~~~~~~~~--------~~~~~s-pd~~~~~l~sg~~~~~l~la~~l~~~~  322 (703)
                      +.+++....+.        ....++ +++  .++++++.++.+++ |++....
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~sg~~dg~i~v-wd~~~~~  270 (312)
T 4ery_A          221 YSKGKCLKTYTGHKNEKYCIFANFSVTGG--KWIVSGSEDNLVYI-WNLQTKE  270 (312)
T ss_dssp             TTTTEEEEEECSSCCSSSCCCEEEECSSS--CEEEECCTTSCEEE-EETTTCC
T ss_pred             CCCCcEEEEEEecCCceEEEEEEEEeCCC--cEEEEECCCCEEEE-EECCCch
Confidence            99887654442        122333 455  67899999999998 9987653

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=99.97  E-value=7.3e-30  Score=264.98  Aligned_cols=240  Identities=15%  Similarity=0.157  Sum_probs=198.3

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCC--ceeEEEecCCCcEEEEEEecC--CCEEEEEECCCeEE
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVET--DTQHETIQLLSDALCVAYKPD--GTEIVVATLDGQLI  116 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~--~~~~~~~~~~~~V~~v~~spd--g~~las~s~dg~I~  116 (703)
                      .++.+|.+.|++++|+|  +|++|+||+.|++|++||+.+.  +....+..|.+.|.+++|+|+  +++|++|+.|++|+
T Consensus         3 ~~~~~h~~~V~~~~~s~--~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~   80 (297)
T 2pm7_B            3 VIANAHNEMIHDAVMDY--YGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVM   80 (297)
T ss_dssp             EECCSCSSCEEEEEECT--TSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEE
T ss_pred             eeccCCcCceEEEEECC--CCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEE
Confidence            46789999999999999  9999999999999999999753  345667789999999999864  89999999999999


Q ss_pred             EEEcCCCc--EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC--CCEEEEEecCCcEEEEECCCCce--EEE
Q psy7108         117 MFDVESAA--QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD--GSCILAAGQSKYICIYSSREGIL--LKK  190 (703)
Q Consensus       117 vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd--g~~l~s~s~dg~I~lwD~~~~~~--~~~  190 (703)
                      +||+++++  .+..+.+|.                    ..|.+++|+|+  +.+|++++.|++|++||++++..  ...
T Consensus        81 iWd~~~~~~~~~~~~~~h~--------------------~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~  140 (297)
T 2pm7_B           81 IWKEENGRWSQIAVHAVHS--------------------ASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPII  140 (297)
T ss_dssp             EEEBSSSCBCCCEEECCCS--------------------SCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEE
T ss_pred             EEEcCCCceEEEEEeecCC--------------------CceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeee
Confidence            99998774  344454444                    38999999997  89999999999999999987632  223


Q ss_pred             EEeccCCccccccccceeeeeccC-------------CCEEEEEcccCCCCCeeEEECCCCCCCc----cceeecCCccc
Q psy7108         191 FTITQNKSLDGINDFINRRKMTEF-------------GNVSLIETRETHEGGNVVLKLPGVKKGD----MAARVLKPEVR  253 (703)
Q Consensus       191 ~~~~~~~~~~~~~~~v~~~~~spd-------------g~~l~~~~~~~~~~~~~~i~iwd~~~~~----~~~~~~~h~~~  253 (703)
                      +.        +|...|.+++|+|+             ++.+++++.++      .|++||+++++    ....+.+|...
T Consensus       141 ~~--------~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~------~v~lwd~~~~~~~~~~~~~l~~H~~~  206 (297)
T 2pm7_B          141 ID--------AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN------LVKIWKYNSDAQTYVLESTLEGHSDW  206 (297)
T ss_dssp             EE--------CCSSCEEEEEECCCC------------CCEEEEEETTS------CEEEEEEETTTTEEEEEEEECCCSSC
T ss_pred             ee--------cccCccceEeecCCcccccccCCCCCCcceEEEEcCCC------cEEEEEEcCCCceEEEEEEecCCCCc
Confidence            33        34558999999997             46777777653      89999998765    45667889999


Q ss_pred             eEEEEEcCCC---CEEEEEeCCC-EEEEEcCCCc------e-----ecceeeeEEEccchhhhHhhcCCcceEEEEEEec
Q psy7108         254 VFCVKFSPTG---QAWVAATTEG-VHIYSLDSGY------V-----FDPFLLDISITPQSVKEALADKDYAKALMMSLKL  318 (703)
Q Consensus       254 V~~l~~spdg---~~l~s~s~Dg-v~iwd~~~~~------~-----~~~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l  318 (703)
                      |.+++|+|++   ++|++++.|+ |++|++++..      .     +.....+++|+|++  ..|++++.|+.+++ |+.
T Consensus       207 V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g--~~las~~~D~~v~l-w~~  283 (297)
T 2pm7_B          207 VRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSG--NVLALSGGDNKVTL-WKE  283 (297)
T ss_dssp             EEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSS--CCEEEEETTSCEEE-EEE
T ss_pred             eEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCC--CEEEEEcCCCcEEE-EEE
Confidence            9999999995   7899999999 9999987642      1     12334679999999  88999999999998 987


Q ss_pred             C
Q psy7108         319 N  319 (703)
Q Consensus       319 ~  319 (703)
                      +
T Consensus       284 ~  284 (297)
T 2pm7_B          284 N  284 (297)
T ss_dssp             C
T ss_pred             C
Confidence            5

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=99.97  E-value=1.5e-29  Score=266.77  Aligned_cols=251  Identities=13%  Similarity=0.190  Sum_probs=190.9

Q ss_pred             ceeeccCC---Cccccccc-cC-CCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCC-------ceeEEEecCCCcEE
Q psy7108          28 VKKGDMAA---RVLKPEVL-SG-HEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVET-------DTQHETIQLLSDAL   95 (703)
Q Consensus        28 v~~~d~tg---~~~~~~~l-~g-H~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~-------~~~~~~~~~~~~V~   95 (703)
                      +++|+...   +++  ..+ .+ |.+.|++++|+|  ++++|++|+.|++|++||+...       .....+..|.+.|.
T Consensus        36 i~lw~~~~~~~~~~--~~~~~~~h~~~v~~v~~sp--~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~  111 (330)
T 2hes_X           36 IKLVSVKYDDFTLI--DVLDETAHKKAIRSVAWRP--HTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVK  111 (330)
T ss_dssp             EEEEECSSSCCEEE--EEECTTCCCSCEEEEEECT--TSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEE
T ss_pred             EEEEEecCCCeEEE--EEEecCCccCCEEEEEECC--CCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEE
Confidence            55565432   333  455 44 999999999999  9999999999999999998532       23345567999999


Q ss_pred             EEEEecCCCEEEEEECCCeEEEEEcCCC----cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEE
Q psy7108          96 CVAYKPDGTEIVVATLDGQLIMFDVESA----AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAA  171 (703)
Q Consensus        96 ~v~~spdg~~las~s~dg~I~vwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~  171 (703)
                      +++|+|+|++|++|+.|++|++||++..    +.+..+.+|..                    .|.+++|+|++++|+++
T Consensus       112 ~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~--------------------~v~~v~~~p~~~~l~s~  171 (330)
T 2hes_X          112 GVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQ--------------------DVKHVIWHPSEALLASS  171 (330)
T ss_dssp             EEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSS--------------------CEEEEEECSSSSEEEEE
T ss_pred             EEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCC--------------------ceEEEEECCCCCEEEEE
Confidence            9999999999999999999999999532    45566666654                    89999999999999999


Q ss_pred             ecCCcEEEEECCCC--ceEEEEEeccCCccccccccceeeeeccC--CCEEEEEcccCCCCCeeEEECCCCCCC------
Q psy7108         172 GQSKYICIYSSREG--ILLKKFTITQNKSLDGINDFINRRKMTEF--GNVSLIETRETHEGGNVVLKLPGVKKG------  241 (703)
Q Consensus       172 s~dg~I~lwD~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~spd--g~~l~~~~~~~~~~~~~~i~iwd~~~~------  241 (703)
                      +.|++|++||..++  +++..+.+        |...|.+++|+|+  +..+++++.++      .|++||+.++      
T Consensus       172 s~D~~i~iW~~~~~~~~~~~~~~~--------h~~~v~~~~~~~~~~~~~l~s~s~D~------~v~iw~~~~~~~~~~~  237 (330)
T 2hes_X          172 SYDDTVRIWKDYDDDWECVAVLNG--------HEGTVWSSDFDKTEGVFRLCSGSDDS------TVRVWKYMGDDEDDQQ  237 (330)
T ss_dssp             ETTSCEEEEEEETTEEEEEEEECC--------CSSCEEEEEECCSSSSCEEEEEETTS------CEEEEEEEEECTTSCE
T ss_pred             cCCCeEEEEECCCCCeeEEEEccC--------CCCcEEEEEecCCCCeeEEEEEeCCC------eEEEEEecCCCccccc
Confidence            99999999999876  45555544        4458999999999  56677766653      8999998765      


Q ss_pred             --ccceeecC-CccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCc--ee-------cc-eeeeEEEcc--chhhhHhhc
Q psy7108         242 --DMAARVLK-PEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGY--VF-------DP-FLLDISITP--QSVKEALAD  305 (703)
Q Consensus       242 --~~~~~~~~-h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~--~~-------~~-~~~~~~~sp--d~~~~~l~s  305 (703)
                        .+...+.. |...|.+++|++++ .|++++.|| |++|+..+++  ..       .. ....++|+|  ++  .+|++
T Consensus       238 ~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~--~~las  314 (330)
T 2hes_X          238 EWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGK--TILAT  314 (330)
T ss_dssp             EEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-------CCEEE
T ss_pred             eeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCc--eEEEE
Confidence              23333444 88999999999765 799999999 9999988763  11       11 346788999  56  78999


Q ss_pred             CCcceEEEEEEecCc
Q psy7108         306 KDYAKALMMSLKLNE  320 (703)
Q Consensus       306 g~~~~~l~la~~l~~  320 (703)
                      ++.|+.+++ |++..
T Consensus       315 ~s~Dg~v~~-W~~~~  328 (330)
T 2hes_X          315 GGDDGIVNF-WSLEK  328 (330)
T ss_dssp             EETTSEEEE-EEC--
T ss_pred             ecCCCcEEE-EEecc
Confidence            999999999 98764

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=99.97  E-value=7.9e-30  Score=270.73  Aligned_cols=247  Identities=16%  Similarity=0.225  Sum_probs=203.1

Q ss_pred             CccccccccCCCc-CeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEE--E-ecCCCcEEEEEEecCCCEEEEEEC
Q psy7108          36 RVLKPEVLSGHEG-PVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHE--T-IQLLSDALCVAYKPDGTEIVVATL  111 (703)
Q Consensus        36 ~~~~~~~l~gH~~-~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~--~-~~~~~~V~~v~~spdg~~las~s~  111 (703)
                      +++  .++.+|.+ .|.+++|+|  +|++||+|+.|++|+|||+.++.....  . ..|...|.+++|+|+|++|++|+.
T Consensus         6 ~~~--~~~~~h~~~~v~~l~~sp--~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~   81 (345)
T 3fm0_A            6 VLL--GRVPAHPDSRCWFLAWNP--AGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASF   81 (345)
T ss_dssp             EEE--EEECCSTTSCEEEEEECT--TSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEET
T ss_pred             EEe--eeecCCCCCcEEEEEECC--CCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEEC
Confidence            455  78889988 999999999  999999999999999999987753322  2 358999999999999999999999


Q ss_pred             CCeEEEEEcCCCc--EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEE
Q psy7108         112 DGQLIMFDVESAA--QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLK  189 (703)
Q Consensus       112 dg~I~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~  189 (703)
                      |++|++||++++.  .+..+.+|..                    .|.+++|+|++++|++|+.|++|++||++++....
T Consensus        82 D~~v~iw~~~~~~~~~~~~~~~h~~--------------------~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~  141 (345)
T 3fm0_A           82 DATTCIWKKNQDDFECVTTLEGHEN--------------------EVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYE  141 (345)
T ss_dssp             TSCEEEEEECCC-EEEEEEECCCSS--------------------CEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEE
T ss_pred             CCcEEEEEccCCCeEEEEEccCCCC--------------------CceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeE
Confidence            9999999998764  4566766654                    89999999999999999999999999998764332


Q ss_pred             EEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCc--cceeecCCccceEEEEEcCCCCEEE
Q psy7108         190 KFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGD--MAARVLKPEVRVFCVKFSPTGQAWV  267 (703)
Q Consensus       190 ~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~--~~~~~~~h~~~V~~l~~spdg~~l~  267 (703)
                      ...     .+.+|...|.+++|+|+++.+++++.++      .|++||.++++  +...+.+|...|++++|+|+|++|+
T Consensus       142 ~~~-----~~~~h~~~v~~~~~~p~~~~l~s~s~d~------~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~  210 (345)
T 3fm0_A          142 CVS-----VLNSHTQDVKHVVWHPSQELLASASYDD------TVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLA  210 (345)
T ss_dssp             EEE-----EECCCCSCEEEEEECSSSSCEEEEETTS------CEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred             EEE-----EecCcCCCeEEEEECCCCCEEEEEeCCC------cEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEE
Confidence            221     1223555899999999999999888764      89999988774  4467789999999999999999999


Q ss_pred             EEeCCC-EEEEEcCCCce----------------------ecceeeeEEEccchhhhHhhcCCcceEEEEEEecCc
Q psy7108         268 AATTEG-VHIYSLDSGYV----------------------FDPFLLDISITPQSVKEALADKDYAKALMMSLKLNE  320 (703)
Q Consensus       268 s~s~Dg-v~iwd~~~~~~----------------------~~~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~  320 (703)
                      +++.|+ |++|+......                      +.....+++|+|++  ..+++++.++.+++ |..+.
T Consensus       211 s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~--~~l~s~~~d~~i~v-w~~~~  283 (345)
T 3fm0_A          211 SCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLT--GALATACGDDAIRV-FQEDP  283 (345)
T ss_dssp             EEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTT--CCEEEEETTSCEEE-EEECT
T ss_pred             EEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCC--CEEEEEeCCCeEEE-EEeCC
Confidence            999999 99999632211                      12234678999998  78899999999998 87653

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=99.97  E-value=5.5e-30  Score=275.71  Aligned_cols=267  Identities=17%  Similarity=0.229  Sum_probs=214.1

Q ss_pred             CCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCC
Q psy7108          34 AARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDG  113 (703)
Q Consensus        34 tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg  113 (703)
                      +..+.  ++|.+|.++|++++|+|  ++++|+||+.||+|++||+.+++....+..|...|.+++|+|+|++|++|+.|+
T Consensus        55 ~~~~~--~~l~gH~~~V~~~~~sp--~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~  130 (380)
T 3iz6_a           55 DLVCC--RTLQGHSGKVYSLDWTP--EKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDS  130 (380)
T ss_dssp             CCEEE--EEECCCSSCEEEEEECT--TSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSS
T ss_pred             eeEEe--ecccccccEEEEEEEcC--CCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCC
Confidence            44556  88999999999999999  999999999999999999999888888888999999999999999999999999


Q ss_pred             eEEEEEcCCCc-------EEEEEeccccCCCCC--------------CCCc--cc------------hhhcccCCccEEE
Q psy7108         114 QLIMFDVESAA-------QVGSVEARRDLDSGR--------------LDTD--LV------------TREQSLKAKAVST  158 (703)
Q Consensus       114 ~I~vwd~~~~~-------~~~~~~~~~~~~~~~--------------~~~~--~~------------~~~~~~~~~~V~~  158 (703)
                      .|++||+.+..       ....+.+|.......              ....  .+            ......|...|.+
T Consensus       131 ~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~  210 (380)
T 3iz6_a          131 ACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLS  210 (380)
T ss_dssp             CCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEE
T ss_pred             cEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEE
Confidence            99999986532       123344443321100              0000  00            0011457788999


Q ss_pred             EEEcC-CCCEEEEEecCCcEEEEECCC-CceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECC
Q psy7108         159 VCYSA-DGSCILAAGQSKYICIYSSRE-GILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLP  236 (703)
Q Consensus       159 i~~sp-dg~~l~s~s~dg~I~lwD~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iw  236 (703)
                      ++|+| +++++++|+.|++|++||++. +..+..+.+        |...|.+++|+|+++.+++++.++      .|++|
T Consensus       211 ~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~--------h~~~v~~v~~~p~~~~l~s~s~D~------~i~lw  276 (380)
T 3iz6_a          211 LSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHG--------HEGDINSVKFFPDGQRFGTGSDDG------TCRLF  276 (380)
T ss_dssp             EEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECC--------CSSCCCEEEECTTSSEEEEECSSS------CEEEE
T ss_pred             EEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECC--------cCCCeEEEEEecCCCeEEEEcCCC------eEEEE
Confidence            99987 889999999999999999984 466666654        445899999999999999888764      89999


Q ss_pred             CCCCCccceeecCCc-------cceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecc----------eeeeEEEccch
Q psy7108         237 GVKKGDMAARVLKPE-------VRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDP----------FLLDISITPQS  298 (703)
Q Consensus       237 d~~~~~~~~~~~~h~-------~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~----------~~~~~~~spd~  298 (703)
                      |+++++.+..+..+.       ..|.+++|+|+|++|++|+.|| |++||+.+++....          .+.+++|+|++
T Consensus       277 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg  356 (380)
T 3iz6_a          277 DMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDG  356 (380)
T ss_dssp             ETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSS
T ss_pred             ECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCC
Confidence            999998776665432       2489999999999999999999 99999987765432          24679999999


Q ss_pred             hhhHhhcCCcceEEEEEEecCch
Q psy7108         299 VKEALADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       299 ~~~~l~sg~~~~~l~la~~l~~~  321 (703)
                        ..+++++.|+.+++ |++...
T Consensus       357 --~~l~sgs~D~~i~i-W~~~~~  376 (380)
T 3iz6_a          357 --SALCTGSWDKNLKI-WAFSGH  376 (380)
T ss_dssp             --SEEEEECTTSCEEE-EECCSS
T ss_pred             --CEEEEeeCCCCEEE-EecCCC
Confidence              88999999999999 988753

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=99.97  E-value=3.9e-29  Score=286.41  Aligned_cols=266  Identities=18%  Similarity=0.223  Sum_probs=214.4

Q ss_pred             ceeeccCCCccccccccCCCcCeEEEEEcCCCCCC-EEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEE
Q psy7108          28 VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSST-GMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEI  106 (703)
Q Consensus        28 v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~-~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~l  106 (703)
                      +.+|| ++++.  ..+.+|.+.|++++|+|  ++. .|++|+.|++|++||..+++....+..|...|.+++|+|||++|
T Consensus       131 v~~wd-~~~~~--~~l~gh~~~v~~v~f~p--~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~l  205 (611)
T 1nr0_A          131 VFLFD-TGTSN--GNLTGQARAMNSVDFKP--SRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLF  205 (611)
T ss_dssp             EEETT-TCCBC--BCCCCCSSCEEEEEECS--SSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred             EEEee-CCCCc--ceecCCCCCceEEEECC--CCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEE
Confidence            44566 56777  88999999999999999  876 69999999999999998876667777899999999999999999


Q ss_pred             EEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCc
Q psy7108         107 VVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGI  186 (703)
Q Consensus       107 as~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~  186 (703)
                      ++++.|++|++||+.+++....+....             .....|.+.|.+++|+|+|++|++++.|++|++||+++++
T Consensus       206 as~s~D~~i~lwd~~~g~~~~~~~~~~-------------~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~  272 (611)
T 1nr0_A          206 ASTGGDGTIVLYNGVDGTKTGVFEDDS-------------LKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLK  272 (611)
T ss_dssp             EEEETTSCEEEEETTTCCEEEECBCTT-------------SSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred             EEEECCCcEEEEECCCCcEeeeecccc-------------ccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCc
Confidence            999999999999999998887764210             0112356699999999999999999999999999999998


Q ss_pred             eEEEEEeccC-----------------------------------CccccccccceeeeeccCCCEEEEEcccCCCCCee
Q psy7108         187 LLKKFTITQN-----------------------------------KSLDGINDFINRRKMTEFGNVSLIETRETHEGGNV  231 (703)
Q Consensus       187 ~~~~~~~~~~-----------------------------------~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~  231 (703)
                      ++.++..+..                                   ..+.+|...|.+++|+|+|+.+++++.++      
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~------  346 (611)
T 1nr0_A          273 VEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEG------  346 (611)
T ss_dssp             EEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTS------
T ss_pred             eeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCC------
Confidence            8877653211                                   12346788999999999999999888764      


Q ss_pred             EEECCCCCCCccceee-c--------------------------------------------------------------
Q psy7108         232 VLKLPGVKKGDMAARV-L--------------------------------------------------------------  248 (703)
Q Consensus       232 ~i~iwd~~~~~~~~~~-~--------------------------------------------------------------  248 (703)
                      .|++||+.+++....+ .                                                              
T Consensus       347 ~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~  426 (611)
T 1nr0_A          347 HINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIA  426 (611)
T ss_dssp             CEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCE
T ss_pred             cEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEE
Confidence            7888887665432211 0                                                              


Q ss_pred             -------------------CCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCce-------ecceeeeEEEccchhhh
Q psy7108         249 -------------------KPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYV-------FDPFLLDISITPQSVKE  301 (703)
Q Consensus       249 -------------------~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~-------~~~~~~~~~~spd~~~~  301 (703)
                                         .|...+.+++|+|||++|++|+.|+ |++|++.++..       +.....+++|+|++  .
T Consensus       427 ~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg--~  504 (611)
T 1nr0_A          427 VAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNG--A  504 (611)
T ss_dssp             EEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTS--S
T ss_pred             EEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeeccCCCCceEEEEECCCC--C
Confidence                               1223467899999999999999999 99999987643       22335779999999  8


Q ss_pred             HhhcCCcceEEEEEEecCc
Q psy7108         302 ALADKDYAKALMMSLKLNE  320 (703)
Q Consensus       302 ~l~sg~~~~~l~la~~l~~  320 (703)
                      ++++++.++.+++ |++..
T Consensus       505 ~las~s~d~~v~~-w~~~~  522 (611)
T 1nr0_A          505 FLVATDQSRKVIP-YSVAN  522 (611)
T ss_dssp             EEEEEETTSCEEE-EEGGG
T ss_pred             EEEEEcCCCCEEE-EEcCC
Confidence            8999999999998 88653

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=99.97  E-value=2.2e-29  Score=288.39  Aligned_cols=251  Identities=14%  Similarity=0.232  Sum_probs=210.0

Q ss_pred             ceeecc-CCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCce--eEEEecCCCcEEEEEEecCCC
Q psy7108          28 VKKGDM-AARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDT--QHETIQLLSDALCVAYKPDGT  104 (703)
Q Consensus        28 v~~~d~-tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~--~~~~~~~~~~V~~v~~spdg~  104 (703)
                      +.+|+. +++..  .++.+|.+.|++++|+|  +|++||||+.||+|+|||+.+++.  ......|.+.|.+++|+|||+
T Consensus        41 v~l~~~~~~~~~--~~~~~h~~~v~~~~~sp--dg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~  116 (611)
T 1nr0_A           41 VYTVPVGSLTDT--EIYTEHSHQTTVAKTSP--SGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESK  116 (611)
T ss_dssp             EEEEETTCSSCC--EEECCCSSCEEEEEECT--TSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSC
T ss_pred             EEEecCCCcccC--eEecCCCCceEEEEECC--CCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCC
Confidence            455663 57777  89999999999999999  999999999999999999975432  345567999999999999999


Q ss_pred             EEEEEECC----CeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCC-EEEEEecCCcEEE
Q psy7108         105 EIVVATLD----GQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGS-CILAAGQSKYICI  179 (703)
Q Consensus       105 ~las~s~d----g~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~-~l~s~s~dg~I~l  179 (703)
                      .|++++.+    +.|++||  +++....+.+|.                    +.|++++|+|++. .|++|+.|++|++
T Consensus       117 ~l~~~~~~~~~~~~v~~wd--~~~~~~~l~gh~--------------------~~v~~v~f~p~~~~~l~s~s~D~~v~l  174 (611)
T 1nr0_A          117 RIAAVGEGRERFGHVFLFD--TGTSNGNLTGQA--------------------RAMNSVDFKPSRPFRIISGSDDNTVAI  174 (611)
T ss_dssp             EEEEEECCSSCSEEEEETT--TCCBCBCCCCCS--------------------SCEEEEEECSSSSCEEEEEETTSCEEE
T ss_pred             EEEEEECCCCceeEEEEee--CCCCcceecCCC--------------------CCceEEEECCCCCeEEEEEeCCCeEEE
Confidence            99998875    3688887  455444555554                    4899999999987 5999999999999


Q ss_pred             EECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeec-------CCcc
Q psy7108         180 YSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL-------KPEV  252 (703)
Q Consensus       180 wD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~-------~h~~  252 (703)
                      ||.+++++..++..|        ...|.+++|+|+|+.+++++.++      .|++||..+++....+.       +|..
T Consensus       175 wd~~~~~~~~~l~~H--------~~~V~~v~fspdg~~las~s~D~------~i~lwd~~~g~~~~~~~~~~~~~~~h~~  240 (611)
T 1nr0_A          175 FEGPPFKFKSTFGEH--------TKFVHSVRYNPDGSLFASTGGDG------TIVLYNGVDGTKTGVFEDDSLKNVAHSG  240 (611)
T ss_dssp             EETTTBEEEEEECCC--------SSCEEEEEECTTSSEEEEEETTS------CEEEEETTTCCEEEECBCTTSSSCSSSS
T ss_pred             EECCCCeEeeeeccc--------cCceEEEEECCCCCEEEEEECCC------cEEEEECCCCcEeeeeccccccccccCC
Confidence            999988887776544        45899999999999999888764      89999999988776663       7999


Q ss_pred             ceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecc--------------------------------------------
Q psy7108         253 RVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDP--------------------------------------------  287 (703)
Q Consensus       253 ~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~--------------------------------------------  287 (703)
                      .|.+++|+|+|++|++++.|+ |++||+.+++....                                            
T Consensus       241 ~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~  320 (611)
T 1nr0_A          241 SVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVR  320 (611)
T ss_dssp             CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEE
T ss_pred             CEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEE
Confidence            999999999999999999999 99999988764321                                            


Q ss_pred             -----eeeeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108         288 -----FLLDISITPQSVKEALADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       288 -----~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~  321 (703)
                           ...+++|+|++  ..+++++.|+.+++ |++...
T Consensus       321 ~gh~~~v~~l~~spdg--~~l~s~s~D~~v~~-Wd~~~~  356 (611)
T 1nr0_A          321 YGHNKAITALSSSADG--KTLFSADAEGHINS-WDISTG  356 (611)
T ss_dssp             CCCSSCEEEEEECTTS--SEEEEEETTSCEEE-EETTTC
T ss_pred             cCCCCCEEEEEEeCCC--CEEEEEeCCCcEEE-EECCCC
Confidence                 12468899999  88999999999998 988653

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=99.97  E-value=3.5e-29  Score=291.26  Aligned_cols=243  Identities=18%  Similarity=0.263  Sum_probs=206.5

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEc
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDV  120 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~  120 (703)
                      +.+.+|...|++++|+|  ++++|+||+.||+|++||+.++.....+..|...|.+++|+|+++.|++|+.|++|++||.
T Consensus       424 ~~~~~h~~~v~~v~~s~--~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~  501 (694)
T 3dm0_A          424 RRLTGHSHFVEDVVLSS--DGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNT  501 (694)
T ss_dssp             EEEECCSSCEEEEEECT--TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECT
T ss_pred             ceecCCCCcEEEEEECC--CCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEC
Confidence            67899999999999999  9999999999999999999998888888889999999999999999999999999999998


Q ss_pred             CCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCC--CEEEEEecCCcEEEEECCCCceEEEEEeccCCc
Q psy7108         121 ESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADG--SCILAAGQSKYICIYSSREGILLKKFTITQNKS  198 (703)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg--~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~  198 (703)
                      ...........                 ...|...|.+++|+|++  ..+++++.|++|++||++++++...+..|.   
T Consensus       502 ~~~~~~~~~~~-----------------~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~---  561 (694)
T 3dm0_A          502 LGECKYTISEG-----------------GEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHT---  561 (694)
T ss_dssp             TSCEEEEECSS-----------------TTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCS---
T ss_pred             CCCcceeeccC-----------------CCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCC---
Confidence            65543322211                 12355689999999987  689999999999999999998887776544   


Q ss_pred             cccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCCEEEEE
Q psy7108         199 LDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYS  278 (703)
Q Consensus       199 ~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dgv~iwd  278 (703)
                           ..|.+++|+|+|+.+++++.++      .|++||+++++.+..+.. ...|.+++|+|++.++++++.++|++||
T Consensus       562 -----~~v~~v~~spdg~~l~sg~~Dg------~i~iwd~~~~~~~~~~~~-~~~v~~~~~sp~~~~l~~~~~~~i~iwd  629 (694)
T 3dm0_A          562 -----GYVSTVAVSPDGSLCASGGKDG------VVLLWDLAEGKKLYSLEA-NSVIHALCFSPNRYWLCAATEHGIKIWD  629 (694)
T ss_dssp             -----SCEEEEEECTTSSEEEEEETTS------BCEEEETTTTEEEECCBC-SSCEEEEEECSSSSEEEEEETTEEEEEE
T ss_pred             -----CCEEEEEEeCCCCEEEEEeCCC------eEEEEECCCCceEEEecC-CCcEEEEEEcCCCcEEEEEcCCCEEEEE
Confidence                 4899999999999999888764      899999999987766554 4679999999999988888766699999


Q ss_pred             cCCCceecce-------------------------eeeEEEccchhhhHhhcCCcceEEEEEEecCc
Q psy7108         279 LDSGYVFDPF-------------------------LLDISITPQSVKEALADKDYAKALMMSLKLNE  320 (703)
Q Consensus       279 ~~~~~~~~~~-------------------------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~  320 (703)
                      +.++.....+                         ..+++|+|++  ..|++++.|+.+++ |++.+
T Consensus       630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg--~~l~sgs~Dg~i~i-W~i~~  693 (694)
T 3dm0_A          630 LESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADG--STLFSGYTDGVIRV-WGIGR  693 (694)
T ss_dssp             TTTTEEEEEECCCCC----------------CCCCEEEEEECTTS--SEEEEEETTSEEEE-EEC--
T ss_pred             CCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCC--CEEEEEcCCCeEEE-EeccC
Confidence            9988764332                         2468899999  89999999999999 98763

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=99.97  E-value=1.4e-28  Score=260.70  Aligned_cols=242  Identities=17%  Similarity=0.192  Sum_probs=198.2

Q ss_pred             ccccCCCcCeEEEEE-----cCCCCCCEEEEEeCCCcEEEEEcCCCc-------eeEEEecCCCcEEEEEEecCCCEEEE
Q psy7108          41 EVLSGHEGPVSCIEF-----SPVLSSTGMVSASWDKTVKLWNAVETD-------TQHETIQLLSDALCVAYKPDGTEIVV  108 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~-----sp~~dg~~L~sgs~Dg~V~iWd~~~~~-------~~~~~~~~~~~V~~v~~spdg~~las  108 (703)
                      .+|.||.+.|++++|     ++. ++++|+||+.|++|++||+.+.+       ....+..|...|.+++|+|++.++++
T Consensus        15 ~~l~gH~~~V~~~~~~~s~~~~~-d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s   93 (343)
T 2xzm_R           15 GILEGHSDWVTSIVAGFSQKENE-DSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAIS   93 (343)
T ss_dssp             EEEECCSSCEEEEEECCCSSTTC-CCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEE
T ss_pred             eeeccchhhhhheeeEEEeecCC-CCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEE
Confidence            788999999999999     543 78999999999999999997542       23455679999999999999999999


Q ss_pred             EECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceE
Q psy7108         109 ATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILL  188 (703)
Q Consensus       109 ~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~  188 (703)
                      |+.|++|++||+++++.+..+.+|..                    .|.+++|+|++++|++++.|++|++||+... ..
T Consensus        94 ~s~D~~v~lwd~~~~~~~~~~~~h~~--------------------~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~-~~  152 (343)
T 2xzm_R           94 SSWDKTLRLWDLRTGTTYKRFVGHQS--------------------EVYSVAFSPDNRQILSAGAEREIKLWNILGE-CK  152 (343)
T ss_dssp             EETTSEEEEEETTSSCEEEEEECCCS--------------------CEEEEEECSSTTEEEEEETTSCEEEEESSSC-EE
T ss_pred             EcCCCcEEEEECCCCcEEEEEcCCCC--------------------cEEEEEECCCCCEEEEEcCCCEEEEEeccCC-ce
Confidence            99999999999999999999988765                    8999999999999999999999999999843 32


Q ss_pred             EEEEeccCCccccccccceeeeeccCC----------CEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEE
Q psy7108         189 KKFTITQNKSLDGINDFINRRKMTEFG----------NVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVK  258 (703)
Q Consensus       189 ~~~~~~~~~~~~~~~~~v~~~~~spdg----------~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~  258 (703)
                      ....     ...++...+.+++|+|++          .++++++.++      .|++|| .+.+....+.+|...|.+++
T Consensus       153 ~~~~-----~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~------~i~iwd-~~~~~~~~~~~h~~~v~~~~  220 (343)
T 2xzm_R          153 FSSA-----EKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDG------RLKVWN-TNFQIRYTFKAHESNVNHLS  220 (343)
T ss_dssp             EECC-----TTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTS------EEEEEE-TTTEEEEEEECCSSCEEEEE
T ss_pred             eeee-----cccCCCceeeeeeeccccccccccCCCCCEEEEEcCCC------EEEEEc-CCCceeEEEcCccccceEEE
Confidence            2221     123466689999999987          5677766653      899999 44566667889999999999


Q ss_pred             EcCCCCEEEEEeCCC-EEEEEcCCC-ceec-----ceeeeEEEccchhhhHhhcCCcceEEEEEEecCc
Q psy7108         259 FSPTGQAWVAATTEG-VHIYSLDSG-YVFD-----PFLLDISITPQSVKEALADKDYAKALMMSLKLNE  320 (703)
Q Consensus       259 ~spdg~~l~s~s~Dg-v~iwd~~~~-~~~~-----~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~  320 (703)
                      |+|+|++|++++.|+ |++||+... ....     ....+++|+|++  .+++.+ .++.+++ |++..
T Consensus       221 ~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~--~~la~~-~d~~v~i-w~~~~  285 (343)
T 2xzm_R          221 ISPNGKYIATGGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKL--QWVAVG-TDQGVKI-FNLMT  285 (343)
T ss_dssp             ECTTSSEEEEEETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSS--CEEEEE-ESSCEEE-EESSS
T ss_pred             ECCCCCEEEEEcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCC--CEEEEE-CCCCEEE-EEeCC
Confidence            999999999999999 999998433 2222     224679999998  566544 5677887 88754

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=99.97  E-value=1.1e-28  Score=260.24  Aligned_cols=241  Identities=13%  Similarity=0.167  Sum_probs=194.1

Q ss_pred             CCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc-eeEEEe--c-CCCcEEEEEEecCCCEEEEEE
Q psy7108          35 ARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD-TQHETI--Q-LLSDALCVAYKPDGTEIVVAT  110 (703)
Q Consensus        35 g~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~-~~~~~~--~-~~~~V~~v~~spdg~~las~s  110 (703)
                      .+++  +++.+|.++|++++|+|  +  +|++|+.|++|++||+..+. ......  . |...|.+++|+|++++|++|+
T Consensus         4 ~~~~--~~~~~h~~~v~~~~~s~--~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s   77 (330)
T 2hes_X            4 INLI--KSLKLYKEKIWSFDFSQ--G--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGS   77 (330)
T ss_dssp             CEEE--EEEECCSSCEEEEEEET--T--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEE
T ss_pred             cccc--eeeccCCCceeeeccCC--C--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEe
Confidence            3455  78899999999999999  6  99999999999999998653 233332  3 889999999999999999999


Q ss_pred             CCCeEEEEEcCC-------CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECC
Q psy7108         111 LDGQLIMFDVES-------AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSR  183 (703)
Q Consensus       111 ~dg~I~vwd~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~  183 (703)
                      .|++|++||++.       .+.+..+.+|..                    .|.+++|+|++++|++|+.|++|++||++
T Consensus        78 ~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~--------------------~V~~v~~sp~g~~las~s~D~~v~iwd~~  137 (330)
T 2hes_X           78 FDSTVSIWAKEESADRTFEMDLLAIIEGHEN--------------------EVKGVAWSNDGYYLATCSRDKSVWIWETD  137 (330)
T ss_dssp             TTSCEEEEEC-------CCCEEEEEEC------------------------CEEEEEECTTSCEEEEEETTSCEEEEECC
T ss_pred             CCCcEEEEEcccCcCccccceeEEEEcCCCC--------------------cEEEEEECCCCCEEEEEeCCCEEEEEecc
Confidence            999999999853       234555555544                    89999999999999999999999999995


Q ss_pred             CC----ceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC--ccceeecCCccceEEE
Q psy7108         184 EG----ILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG--DMAARVLKPEVRVFCV  257 (703)
Q Consensus       184 ~~----~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~--~~~~~~~~h~~~V~~l  257 (703)
                      ..    +++..+..        |...|.+++|+|++..+++++.++      .|++||..++  +++..+.+|...|.++
T Consensus       138 ~~~~~~~~~~~~~~--------h~~~v~~v~~~p~~~~l~s~s~D~------~i~iW~~~~~~~~~~~~~~~h~~~v~~~  203 (330)
T 2hes_X          138 ESGEEYECISVLQE--------HSQDVKHVIWHPSEALLASSSYDD------TVRIWKDYDDDWECVAVLNGHEGTVWSS  203 (330)
T ss_dssp             TTCCCCEEEEEECC--------CSSCEEEEEECSSSSEEEEEETTS------CEEEEEEETTEEEEEEEECCCSSCEEEE
T ss_pred             CCCCCeEEEEEecc--------CCCceEEEEECCCCCEEEEEcCCC------eEEEEECCCCCeeEEEEccCCCCcEEEE
Confidence            32    34445443        445899999999999999888764      8999998766  5677888999999999


Q ss_pred             EEcCC--CCEEEEEeCCC-EEEEEcCCCc--------e-------ecceeeeEEEccchhhhHhhcCCcceEEEEEEecC
Q psy7108         258 KFSPT--GQAWVAATTEG-VHIYSLDSGY--------V-------FDPFLLDISITPQSVKEALADKDYAKALMMSLKLN  319 (703)
Q Consensus       258 ~~spd--g~~l~s~s~Dg-v~iwd~~~~~--------~-------~~~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~  319 (703)
                      +|+|+  +..|++++.|+ |++|++.++.        .       +.....+++|++++   .+++++.|+.+++ |+..
T Consensus       204 ~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~---~l~s~~~dg~v~i-w~~~  279 (330)
T 2hes_X          204 DFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG---LIASVGADGVLAV-YEEV  279 (330)
T ss_dssp             EECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS---CEEEEETTSCEEE-EEEE
T ss_pred             EecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC---EEEEEeCCCEEEE-EEcC
Confidence            99999  67899999999 9999986541        1       22335678898765   6788899999998 8764

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=99.97  E-value=2.1e-29  Score=263.94  Aligned_cols=243  Identities=14%  Similarity=0.152  Sum_probs=192.6

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCce--eEEEecCCCcEEEEEEec--CCCEEEEEECCCeEE
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDT--QHETIQLLSDALCVAYKP--DGTEIVVATLDGQLI  116 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~--~~~~~~~~~~V~~v~~sp--dg~~las~s~dg~I~  116 (703)
                      .++.+|.++|++++|+|  +|++|+||+.|++|++||+.++..  ...+..|.+.|.+++|+|  ++++|++|+.|++|+
T Consensus         7 ~~~~~H~~~V~~v~~s~--~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~   84 (316)
T 3bg1_A            7 TVDTSHEDMIHDAQMDY--YGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVI   84 (316)
T ss_dssp             -------CCEEEEEECG--GGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEE
T ss_pred             eecccccCeEEEeeEcC--CCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEE
Confidence            45689999999999999  999999999999999999987642  345667999999999986  489999999999999


Q ss_pred             EEEcCCCc--EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC--CCEEEEEecCCcEEEEECCCCceEEEEE
Q psy7108         117 MFDVESAA--QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD--GSCILAAGQSKYICIYSSREGILLKKFT  192 (703)
Q Consensus       117 vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd--g~~l~s~s~dg~I~lwD~~~~~~~~~~~  192 (703)
                      +||+++++  ....+.+|..                    .|.+++|+|+  +.+|++|+.|++|++||++++...... 
T Consensus        85 iWd~~~~~~~~~~~~~~h~~--------------------~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~-  143 (316)
T 3bg1_A           85 IWREENGTWEKSHEHAGHDS--------------------SVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVK-  143 (316)
T ss_dssp             EECCSSSCCCEEEEECCCSS--------------------CCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEEC-
T ss_pred             EEECCCCcceEEEEccCCCC--------------------ceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCccee-
Confidence            99998873  4555656544                    8999999998  789999999999999999876322111 


Q ss_pred             eccCCccccccccceeeeeccCC-----------------CEEEEEcccCCCCCeeEEECCCCCCC---ccceeecCCcc
Q psy7108         193 ITQNKSLDGINDFINRRKMTEFG-----------------NVSLIETRETHEGGNVVLKLPGVKKG---DMAARVLKPEV  252 (703)
Q Consensus       193 ~~~~~~~~~~~~~v~~~~~spdg-----------------~~l~~~~~~~~~~~~~~i~iwd~~~~---~~~~~~~~h~~  252 (703)
                          ....+|...+.+++|+|++                 +.+++++.+      ..|++||++..   ++...+.+|..
T Consensus       144 ----~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D------~~v~lWd~~~~~~~~~~~~l~~h~~  213 (316)
T 3bg1_A          144 ----KINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCD------NLIKLWKEEEDGQWKEEQKLEAHSD  213 (316)
T ss_dssp             ----CBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTT------SBCCEEEECTTSCEEEEECCBCCSS
T ss_pred             ----eeeccccCCcceEEEccccCCccccccccccCccccceEEEecCC------CeEEEEEeCCCCccceeeecccCCC
Confidence                1234566688999999983                 566665554      38999998754   35667788999


Q ss_pred             ceEEEEEcCCC----CEEEEEeCCC-EEEEEcCCC-------ce---ecceeeeEEEccchhhhHhhcCCcceEEEEEEe
Q psy7108         253 RVFCVKFSPTG----QAWVAATTEG-VHIYSLDSG-------YV---FDPFLLDISITPQSVKEALADKDYAKALMMSLK  317 (703)
Q Consensus       253 ~V~~l~~spdg----~~l~s~s~Dg-v~iwd~~~~-------~~---~~~~~~~~~~spd~~~~~l~sg~~~~~l~la~~  317 (703)
                      .|.+++|+|++    +.|++++.|+ |++|++.+.       ..   +.....+++|+|++  ..+++++.|+.+++ |+
T Consensus       214 ~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g--~~las~~~D~~v~l-w~  290 (316)
T 3bg1_A          214 WVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITA--NILAVSGGDNKVTL-WK  290 (316)
T ss_dssp             CEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTT--CCEEEEESSSCEEE-EE
T ss_pred             ceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCC--CEEEEEcCCCeEEE-EE
Confidence            99999999987    7899999999 999998762       11   22335789999999  88999999999999 98


Q ss_pred             cC
Q psy7108         318 LN  319 (703)
Q Consensus       318 l~  319 (703)
                      ..
T Consensus       291 ~~  292 (316)
T 3bg1_A          291 ES  292 (316)
T ss_dssp             EC
T ss_pred             EC
Confidence            75

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=99.97  E-value=5e-28  Score=274.55  Aligned_cols=244  Identities=24%  Similarity=0.371  Sum_probs=213.8

Q ss_pred             ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEE
Q psy7108          28 VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIV  107 (703)
Q Consensus        28 v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~la  107 (703)
                      +++|+.+++.+  ..+.+|...|.+++|+|  +++.|++|+.||.+++||. +++.......|...|.+++|+|||++|+
T Consensus       327 i~~w~~~~~~~--~~~~~~~~~v~~~~~s~--~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~  401 (577)
T 2ymu_A          327 VKLWNRNGQHL--QTLTGHSSSVWGVAFSP--DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIA  401 (577)
T ss_dssp             EEEEETTSCEE--EEECCCSSCEEEEEECT--TSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEE
T ss_pred             EEEEeCCCCee--EEEeCCCCCEEEEEECC--CCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEE
Confidence            77888888888  88999999999999999  9999999999999999996 4556777778999999999999999999


Q ss_pred             EEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCce
Q psy7108         108 VATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGIL  187 (703)
Q Consensus       108 s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~  187 (703)
                      +++.|+.|++||. +++.+..+.+|..                    .|++++|+||+++|++++.|+.|++||. +++.
T Consensus       402 ~~~~d~~v~~~~~-~~~~~~~~~~~~~--------------------~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~  459 (577)
T 2ymu_A          402 SASDDKTVKLWNR-NGQLLQTLTGHSS--------------------SVWGVAFSPDDQTIASASDDKTVKLWNR-NGQL  459 (577)
T ss_dssp             EEETTSEEEEECT-TCCEEEEEECCSS--------------------CEEEEEECTTSSEEEEEETTSEEEEEET-TSCE
T ss_pred             EEeCCCEEEEEeC-CCCEEEEecCCCC--------------------CeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCE
Confidence            9999999999995 5677777777655                    8999999999999999999999999996 4666


Q ss_pred             EEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEE
Q psy7108         188 LKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWV  267 (703)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~  267 (703)
                      +..+..+.        ..|.+++|+|+++.+++++.++      .|++||. +++++..+.+|...|++++|+|||++|+
T Consensus       460 ~~~~~~~~--------~~v~~~~~spd~~~las~~~d~------~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~  524 (577)
T 2ymu_A          460 LQTLTGHS--------SSVRGVAFSPDGQTIASASDDK------TVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIA  524 (577)
T ss_dssp             EEEEECCS--------SCEEEEEECTTSCEEEEEETTS------EEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEE
T ss_pred             EEEEcCCC--------CCEEEEEEcCCCCEEEEEeCCC------EEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEE
Confidence            66666544        4899999999999999887764      8999995 6788888999999999999999999999


Q ss_pred             EEeCCC-EEEEEcCCCceecce------eeeEEEccchhhhHhhcCCcceEEEEEEe
Q psy7108         268 AATTEG-VHIYSLDSGYVFDPF------LLDISITPQSVKEALADKDYAKALMMSLK  317 (703)
Q Consensus       268 s~s~Dg-v~iwd~~~~~~~~~~------~~~~~~spd~~~~~l~sg~~~~~l~la~~  317 (703)
                      +++.|+ |++||.. ++.+..+      +.+++|+||+  .+|++++.|+++++ |+
T Consensus       525 s~~~dg~v~lwd~~-~~~~~~~~~h~~~v~~~~fs~dg--~~l~s~~~D~~i~~-Wd  577 (577)
T 2ymu_A          525 SASDDKTVKLWNRN-GQLLQTLTGHSSSVWGVAFSPDG--QTIASASSDKTVKL-WN  577 (577)
T ss_dssp             EEETTSEEEEECTT-SCEEEEEECCSSCEEEEEECTTS--SCEEEEETTSCEEE-EC
T ss_pred             EEECcCEEEEEeCC-CCEEEEEcCCCCCEEEEEEcCCC--CEEEEEeCCCEEEE-eC
Confidence            999999 9999964 5554433      4679999999  88999999999988 74

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=99.97  E-value=2.2e-28  Score=264.41  Aligned_cols=236  Identities=16%  Similarity=0.286  Sum_probs=199.6

Q ss_pred             CCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCC------------------CcEEEEEEecCCCEE
Q psy7108          45 GHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLL------------------SDALCVAYKPDGTEI  106 (703)
Q Consensus        45 gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~------------------~~V~~v~~spdg~~l  106 (703)
                      +|.+.|++++|+|  +|++|++|+ |+++++|++.+++....+..+.                  ..|.+++|+|+|++|
T Consensus        62 ~h~~~V~~v~fsp--dg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l  138 (393)
T 1erj_A           62 DHTSVVCCVKFSN--DGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFL  138 (393)
T ss_dssp             ECSSCCCEEEECT--TSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEE
T ss_pred             CCCCEEEEEEECC--CCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEE
Confidence            6999999999999  999999987 6899999999887655544332                  248999999999999


Q ss_pred             EEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCc
Q psy7108         107 VVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGI  186 (703)
Q Consensus       107 as~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~  186 (703)
                      ++|+.|+.|++||+++++.+..+.+|..                    .|.+++|+|+++.|++++.|++|++||+++++
T Consensus       139 ~s~~~d~~i~iwd~~~~~~~~~~~~h~~--------------------~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~  198 (393)
T 1erj_A          139 ATGAEDRLIRIWDIENRKIVMILQGHEQ--------------------DIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQ  198 (393)
T ss_dssp             EEEETTSCEEEEETTTTEEEEEECCCSS--------------------CEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred             EEEcCCCeEEEEECCCCcEEEEEccCCC--------------------CEEEEEEcCCCCEEEEecCCCcEEEEECCCCe
Confidence            9999999999999999999888888765                    89999999999999999999999999999998


Q ss_pred             eEEEEEeccCCccccccccceeeeecc-CCCEEEEEcccCCCCCeeEEECCCCCCCccceee-------cCCccceEEEE
Q psy7108         187 LLKKFTITQNKSLDGINDFINRRKMTE-FGNVSLIETRETHEGGNVVLKLPGVKKGDMAARV-------LKPEVRVFCVK  258 (703)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~v~~~~~sp-dg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~-------~~h~~~V~~l~  258 (703)
                      +...+..         ...+.+++++| +++++++++.++      .|++||+++++.+..+       .+|...|.+++
T Consensus       199 ~~~~~~~---------~~~v~~~~~~~~~~~~l~~~s~d~------~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~  263 (393)
T 1erj_A          199 CSLTLSI---------EDGVTTVAVSPGDGKYIAAGSLDR------AVRVWDSETGFLVERLDSENESGTGHKDSVYSVV  263 (393)
T ss_dssp             EEEEEEC---------SSCEEEEEECSTTCCEEEEEETTS------CEEEEETTTCCEEEEEC------CCCSSCEEEEE
T ss_pred             eEEEEEc---------CCCcEEEEEECCCCCEEEEEcCCC------cEEEEECCCCcEEEeecccccCCCCCCCCEEEEE
Confidence            8777652         23688999999 888888877664      8999999998876655       57889999999


Q ss_pred             EcCCCCEEEEEeCCC-EEEEEcCCCce------------------ecceeeeEEEccchhhhHhhcCCcceEEEEEEecC
Q psy7108         259 FSPTGQAWVAATTEG-VHIYSLDSGYV------------------FDPFLLDISITPQSVKEALADKDYAKALMMSLKLN  319 (703)
Q Consensus       259 ~spdg~~l~s~s~Dg-v~iwd~~~~~~------------------~~~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~  319 (703)
                      |+|+|++|++++.|+ |++||+.+...                  +.....+++++|++  .++++++.|+.+.+ |++.
T Consensus       264 ~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~l~sgs~D~~v~i-wd~~  340 (393)
T 1erj_A          264 FTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQND--EYILSGSKDRGVLF-WDKK  340 (393)
T ss_dssp             ECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGG--CEEEEEETTSEEEE-EETT
T ss_pred             ECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCC--CEEEEEeCCCeEEE-EECC
Confidence            999999999999999 99999876422                  12234678999999  88999999999998 9876


Q ss_pred             ch
Q psy7108         320 EQ  321 (703)
Q Consensus       320 ~~  321 (703)
                      ..
T Consensus       341 ~~  342 (393)
T 1erj_A          341 SG  342 (393)
T ss_dssp             TC
T ss_pred             CC
Confidence            54

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=99.96  E-value=1.1e-28  Score=263.14  Aligned_cols=207  Identities=13%  Similarity=0.149  Sum_probs=175.1

Q ss_pred             cccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCC-EEEEEECCCeEEEEEc
Q psy7108          42 VLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGT-EIVVATLDGQLIMFDV  120 (703)
Q Consensus        42 ~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~-~las~s~dg~I~vwd~  120 (703)
                      ...+|.+.|++++|+|  ++++|++|+.|++|++||+.+++....+..|...|.+++|+|++. .+++++.|+.|++||+
T Consensus       134 ~~~~h~~~V~~v~~sp--dg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~  211 (357)
T 4g56_B          134 AKYEHDDIVKTLSVFS--DGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDT  211 (357)
T ss_dssp             EECCCSSCEEEEEECS--SSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCT
T ss_pred             ccCCCCCCEEEEEECC--CCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEEC
Confidence            3458999999999999  999999999999999999999887777888999999999999985 7899999999999999


Q ss_pred             CCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC-CCEEEEEecCCcEEEEECCCCceEEEEEeccCCcc
Q psy7108         121 ESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD-GSCILAAGQSKYICIYSSREGILLKKFTITQNKSL  199 (703)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd-g~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~  199 (703)
                      ++++....+..+.                  +...+.+++|+|+ +.+|++|+.|+.|++||+++++++..+..+.    
T Consensus       212 ~~~~~~~~~~~~~------------------~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~----  269 (357)
T 4g56_B          212 RKPKPATRIDFCA------------------SDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHS----  269 (357)
T ss_dssp             TSSSCBCBCCCTT------------------CCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCS----
T ss_pred             CCCceeeeeeecc------------------ccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccc----
Confidence            9887655443321                  2347999999997 5688899999999999999999888876544    


Q ss_pred             ccccccceeeeeccCCC-EEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcC-CCCEEEEEeCCC-EEE
Q psy7108         200 DGINDFINRRKMTEFGN-VSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSP-TGQAWVAATTEG-VHI  276 (703)
Q Consensus       200 ~~~~~~v~~~~~spdg~-~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~sp-dg~~l~s~s~Dg-v~i  276 (703)
                          ..|++++|+|++. ++++++.+      +.|++||+++++.... .+|...|++++|+| ++++|++++.|+ |++
T Consensus       270 ----~~v~~l~~sp~~~~~lasgs~D------~~i~iwd~~~~~~~~~-~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~i  338 (357)
T 4g56_B          270 ----QNITGLAYSYHSSPFLASISED------CTVAVLDADFSEVFRD-LSHRDFVTGVAWSPLDHSKFTTVGWDHKVLH  338 (357)
T ss_dssp             ----SCEEEEEECSSSSCCEEEEETT------SCEEEECTTSCEEEEE-CCCSSCEEEEEECSSSTTEEEEEETTSCEEE
T ss_pred             ----eeEEEEEEcCCCCCEEEEEeCC------CEEEEEECCCCcEeEE-CCCCCCEEEEEEeCCCCCEEEEEcCCCeEEE
Confidence                4899999999986 45555554      3899999999887654 58999999999999 799999999999 999


Q ss_pred             EEcCCCc
Q psy7108         277 YSLDSGY  283 (703)
Q Consensus       277 wd~~~~~  283 (703)
                      |++.+..
T Consensus       339 W~~~~~~  345 (357)
T 4g56_B          339 HHLPSEG  345 (357)
T ss_dssp             EECC---
T ss_pred             EECCCCC
Confidence            9997643

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=99.96  E-value=1.8e-27  Score=249.63  Aligned_cols=233  Identities=15%  Similarity=0.241  Sum_probs=204.9

Q ss_pred             CCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc--eeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCC
Q psy7108          45 GHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD--TQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVES  122 (703)
Q Consensus        45 gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~--~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~  122 (703)
                      +|...|.+++|+|  ++++|++++.||.|++||+.+++  .......|...|.+++|+|+++.+++++.|+.|++||+++
T Consensus        95 ~~~~~v~~~~~~~--~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~  172 (337)
T 1gxr_A           95 NRDNYIRSCKLLP--DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN  172 (337)
T ss_dssp             CTTSBEEEEEECT--TSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred             CCCCcEEEEEEcC--CCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCC
Confidence            7999999999999  99999999999999999998876  3455666889999999999999999999999999999999


Q ss_pred             CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccc
Q psy7108         123 AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGI  202 (703)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~  202 (703)
                      ++....+..|..                    .+.+++|+|+++.|++++.|+.|++||+++++.+..+.         +
T Consensus       173 ~~~~~~~~~~~~--------------------~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~---------~  223 (337)
T 1gxr_A          173 QTLVRQFQGHTD--------------------GASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD---------F  223 (337)
T ss_dssp             TEEEEEECCCSS--------------------CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE---------C
T ss_pred             CceeeeeecccC--------------------ceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec---------C
Confidence            998888877654                    89999999999999999999999999999998877764         2


Q ss_pred             cccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCC
Q psy7108         203 NDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDS  281 (703)
Q Consensus       203 ~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~  281 (703)
                      ...+.+++|+|+++.+++++.++      .+++||+++++. .....|...|.+++|+|++++|++++.|| +++|++.+
T Consensus       224 ~~~v~~~~~s~~~~~l~~~~~~~------~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~  296 (337)
T 1gxr_A          224 TSQIFSLGYCPTGEWLAVGMESS------NVEVLHVNKPDK-YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPY  296 (337)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTS------CEEEEETTSSCE-EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred             CCceEEEEECCCCCEEEEEcCCC------cEEEEECCCCCe-EEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCC
Confidence            33789999999999999887654      799999988765 45678999999999999999999999999 99999998


Q ss_pred             Cceecce-----eeeEEEccchhhhHhhcCCcceEEEEEEec
Q psy7108         282 GYVFDPF-----LLDISITPQSVKEALADKDYAKALMMSLKL  318 (703)
Q Consensus       282 ~~~~~~~-----~~~~~~spd~~~~~l~sg~~~~~l~la~~l  318 (703)
                      ++.....     ..+++|+|++  ..+++++.++.+.+ |++
T Consensus       297 ~~~~~~~~~~~~v~~~~~s~~~--~~l~~~~~dg~i~i-w~~  335 (337)
T 1gxr_A          297 GASIFQSKESSSVLSCDISVDD--KYIVTGSGDKKATV-YEV  335 (337)
T ss_dssp             CCEEEEEECSSCEEEEEECTTS--CEEEEEETTSCEEE-EEE
T ss_pred             CeEEEEecCCCcEEEEEECCCC--CEEEEecCCCeEEE-EEE
Confidence            8765322     3678999999  78889999999887 765

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=99.96  E-value=3.8e-27  Score=267.25  Aligned_cols=246  Identities=24%  Similarity=0.367  Sum_probs=215.0

Q ss_pred             ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEE
Q psy7108          28 VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIV  107 (703)
Q Consensus        28 v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~la  107 (703)
                      +++|+.+++++  ..+.+|.+.|.+++|+|  ++..|++++.|++|++||.... .......|...|.+++|+|+++.++
T Consensus       286 i~~w~~~~~~~--~~~~~h~~~v~~~~~~~--~~~~l~t~~~d~~i~~w~~~~~-~~~~~~~~~~~v~~~~~s~~g~~l~  360 (577)
T 2ymu_A          286 VKLWNRNGQLL--QTLTGHSSSVWGVAFSP--DGQTIASASDDKTVKLWNRNGQ-HLQTLTGHSSSVWGVAFSPDGQTIA  360 (577)
T ss_dssp             EEEEETTSCEE--EEECCCSSCEEEEEECT--TSSEEEEEETTSCEEEEETTSC-EEEEECCCSSCEEEEEECTTSSEEE
T ss_pred             EEEEeCCCcEE--EEEecCCCCeEEEEECC--CCCEEEEEeCCCeEEEEeCCCC-eeEEEeCCCCCEEEEEECCCCCEEE
Confidence            67889899988  89999999999999999  9999999999999999998554 5667778999999999999999999


Q ss_pred             EEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCce
Q psy7108         108 VATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGIL  187 (703)
Q Consensus       108 s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~  187 (703)
                      +++.|+.|++||. +++.+..+.+|..                    .|.+++|+||+++|++++.|+.|++||. +++.
T Consensus       361 ~~~~dg~v~~~~~-~~~~~~~~~~~~~--------------------~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~  418 (577)
T 2ymu_A          361 SASDDKTVKLWNR-NGQLLQTLTGHSS--------------------SVRGVAFSPDGQTIASASDDKTVKLWNR-NGQL  418 (577)
T ss_dssp             EEETTSEEEEEET-TCCEEEEEECCSS--------------------CEEEEEECTTSSCEEEEETTSEEEEECT-TCCE
T ss_pred             EEeCCCEEEEEcC-CCCEEEEecCCCC--------------------CeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCE
Confidence            9999999999995 5777777777654                    8999999999999999999999999995 5667


Q ss_pred             EEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEE
Q psy7108         188 LKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWV  267 (703)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~  267 (703)
                      +..+..+.        ..|.+++|+|+++.+++++.++      .+++||. +++....+.+|...|.+++|+|++++|+
T Consensus       419 ~~~~~~~~--------~~v~~~~~s~d~~~l~~~~~d~------~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~la  483 (577)
T 2ymu_A          419 LQTLTGHS--------SSVWGVAFSPDDQTIASASDDK------TVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIA  483 (577)
T ss_dssp             EEEEECCS--------SCEEEEEECTTSSEEEEEETTS------EEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEE
T ss_pred             EEEecCCC--------CCeEEEEECCCCCEEEEEcCCC------EEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEE
Confidence            77766544        4899999999999999887663      8999996 5677788889999999999999999999


Q ss_pred             EEeCCC-EEEEEcCCCceecce------eeeEEEccchhhhHhhcCCcceEEEEEEecC
Q psy7108         268 AATTEG-VHIYSLDSGYVFDPF------LLDISITPQSVKEALADKDYAKALMMSLKLN  319 (703)
Q Consensus       268 s~s~Dg-v~iwd~~~~~~~~~~------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~  319 (703)
                      +++.|+ |++|+. +++....+      ..+++|+|++  .+|++++.|+.+++ |+..
T Consensus       484 s~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg--~~l~s~~~dg~v~l-wd~~  538 (577)
T 2ymu_A          484 SASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDG--QTIASASDDKTVKL-WNRN  538 (577)
T ss_dssp             EEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTS--SCEEEEETTSEEEE-ECTT
T ss_pred             EEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCC--CEEEEEECcCEEEE-EeCC
Confidence            999999 999996 45554433      3679999999  88999999999998 8854

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=99.96  E-value=5.4e-28  Score=258.02  Aligned_cols=247  Identities=15%  Similarity=0.162  Sum_probs=203.3

Q ss_pred             CCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCC--CceeEEEecCCCcEEEEEEecC--CCEEEEEE
Q psy7108          35 ARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVE--TDTQHETIQLLSDALCVAYKPD--GTEIVVAT  110 (703)
Q Consensus        35 g~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~--~~~~~~~~~~~~~V~~v~~spd--g~~las~s  110 (703)
                      |+++  .++.+|.++|++++|+|  ++++|++|+.||.|++||+..  ......+..|...|.+++|+|+  +++|++++
T Consensus         1 G~~~--~~~~~h~~~v~~~~~s~--~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~   76 (379)
T 3jrp_A            1 GSMV--VIANAHNELIHDAVLDY--YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCS   76 (379)
T ss_dssp             ------CCEEECCCCEEEEEECS--SSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE
T ss_pred             CCcc--EEecCCcccEEEEEEcC--CCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEec
Confidence            4556  88999999999999999  999999999999999999973  3344556679999999999987  89999999


Q ss_pred             CCCeEEEEEcCCCc--EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC--CCEEEEEecCCcEEEEECCCCc
Q psy7108         111 LDGQLIMFDVESAA--QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD--GSCILAAGQSKYICIYSSREGI  186 (703)
Q Consensus       111 ~dg~I~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd--g~~l~s~s~dg~I~lwD~~~~~  186 (703)
                      .||.|++||+++++  ....+..|..                    .|.+++|+|+  +++|++++.|+.|++||++++.
T Consensus        77 ~dg~v~iwd~~~~~~~~~~~~~~~~~--------------------~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~  136 (379)
T 3jrp_A           77 YDGKVLIWKEENGRWSQIAVHAVHSA--------------------SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENG  136 (379)
T ss_dssp             TTSCEEEEEEETTEEEEEEEECCCSS--------------------CEEEEEECCGGGCSEEEEEETTSEEEEEECCTTS
T ss_pred             cCCEEEEEEcCCCceeEeeeecCCCc--------------------ceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCC
Confidence            99999999999987  5555655543                    8999999999  9999999999999999999874


Q ss_pred             eEEEEEeccCCccccccccceeeeecc-------------CCCEEEEEcccCCCCCeeEEECCCCCCCc----cceeecC
Q psy7108         187 LLKKFTITQNKSLDGINDFINRRKMTE-------------FGNVSLIETRETHEGGNVVLKLPGVKKGD----MAARVLK  249 (703)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~v~~~~~sp-------------dg~~l~~~~~~~~~~~~~~i~iwd~~~~~----~~~~~~~  249 (703)
                      ......      ..++...|.+++|+|             ++..+++++.++      .|++||++++.    ....+.+
T Consensus       137 ~~~~~~------~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg------~i~i~d~~~~~~~~~~~~~~~~  204 (379)
T 3jrp_A          137 TTSPII------IDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN------LVKIWKYNSDAQTYVLESTLEG  204 (379)
T ss_dssp             CCCEEE------EECCTTCEEEEEECCCC----------CTTCEEEEEETTS------CEEEEEEETTTTEEEEEEEECC
T ss_pred             ceeeEE------ecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCC------eEEEEEecCCCcceeeEEEEec
Confidence            332222      123445899999999             688888887764      79999998764    3456678


Q ss_pred             CccceEEEEEcCC---CCEEEEEeCCC-EEEEEcCCCce-----------ecceeeeEEEccchhhhHhhcCCcceEEEE
Q psy7108         250 PEVRVFCVKFSPT---GQAWVAATTEG-VHIYSLDSGYV-----------FDPFLLDISITPQSVKEALADKDYAKALMM  314 (703)
Q Consensus       250 h~~~V~~l~~spd---g~~l~s~s~Dg-v~iwd~~~~~~-----------~~~~~~~~~~spd~~~~~l~sg~~~~~l~l  314 (703)
                      |...|.+++|+|+   +++|++++.|| |++|++.++..           +.....+++|+|++  ..+++++.++.+.+
T Consensus       205 h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g--~~l~~~~~dg~i~i  282 (379)
T 3jrp_A          205 HSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSG--NVLALSGGDNKVTL  282 (379)
T ss_dssp             CSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSS--CCEEEEESSSSEEE
T ss_pred             ccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCC--CEEEEecCCCcEEE
Confidence            9999999999999   89999999999 99999988631           12234678999999  78888888999998


Q ss_pred             EEecCc
Q psy7108         315 SLKLNE  320 (703)
Q Consensus       315 a~~l~~  320 (703)
                       |+++.
T Consensus       283 -w~~~~  287 (379)
T 3jrp_A          283 -WKENL  287 (379)
T ss_dssp             -EEEEE
T ss_pred             -EeCCC
Confidence             88764

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=99.96  E-value=1.4e-27  Score=253.55  Aligned_cols=259  Identities=14%  Similarity=0.178  Sum_probs=216.1

Q ss_pred             ccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEEC
Q psy7108          32 DMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATL  111 (703)
Q Consensus        32 d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~  111 (703)
                      ...|...++..+.+|.++|++++|+|  ++++|++|+.||.|++||+.+++....+..|...|.+++|+|++++|++++.
T Consensus        17 ~~~G~~~~~~~l~~h~~~v~~~~~s~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~   94 (369)
T 3zwl_B           17 YFQGSHMKAIKLTGHERPLTQVKYNK--EGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSA   94 (369)
T ss_dssp             CSSCCSEEEEEEECCSSCEEEEEECT--TSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred             EEeccccccEEEEEeeceEEEEEEcC--CCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeC
Confidence            34666665577899999999999999  9999999999999999999998888888889999999999999999999999


Q ss_pred             CCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC-----CcEEEEECCCCc
Q psy7108         112 DGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS-----KYICIYSSREGI  186 (703)
Q Consensus       112 dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d-----g~I~lwD~~~~~  186 (703)
                      |+.|++||+++++.+..+. +..                    .+.+++|+|+++++++++.+     +.|++||++...
T Consensus        95 dg~i~iwd~~~~~~~~~~~-~~~--------------------~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~  153 (369)
T 3zwl_B           95 DYSIKLWDVSNGQCVATWK-SPV--------------------PVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDS  153 (369)
T ss_dssp             TTEEEEEETTTCCEEEEEE-CSS--------------------CEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECT
T ss_pred             CCeEEEEECCCCcEEEEee-cCC--------------------CeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCc
Confidence            9999999999999888877 322                    79999999999999999998     999999998764


Q ss_pred             eEEEEEeccC---Cccccccc--cceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCC-CccceeecCCccceEEEEEc
Q psy7108         187 LLKKFTITQN---KSLDGIND--FINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKK-GDMAARVLKPEVRVFCVKFS  260 (703)
Q Consensus       187 ~~~~~~~~~~---~~~~~~~~--~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~-~~~~~~~~~h~~~V~~l~~s  260 (703)
                      ....+.....   .....+..  .+.+++|+|+++.+++++.++      .|++||+++ ++....+..|...|.+++|+
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg------~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~  227 (369)
T 3zwl_B          154 ATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDG------KISKYDVSNNYEYVDSIDLHEKSISDMQFS  227 (369)
T ss_dssp             TTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTS------EEEEEETTTTTEEEEEEECCSSCEEEEEEC
T ss_pred             cceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCC------EEEEEECCCCcEeEEEEecCCCceeEEEEC
Confidence            3322221111   11222333  789999999999999887764      899999998 67788888999999999999


Q ss_pred             CCCCEEEEEeCCC-EEEEEcCCCceecce---------------------------------------------------
Q psy7108         261 PTGQAWVAATTEG-VHIYSLDSGYVFDPF---------------------------------------------------  288 (703)
Q Consensus       261 pdg~~l~s~s~Dg-v~iwd~~~~~~~~~~---------------------------------------------------  288 (703)
                      |++++|++++.|+ |++||+.+++....+                                                   
T Consensus       228 ~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~  307 (369)
T 3zwl_B          228 PDLTYFITSSRDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEE  307 (369)
T ss_dssp             TTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCE
T ss_pred             CCCCEEEEecCCceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcc
Confidence            9999999999999 999999876543211                                                   


Q ss_pred             ----------eeeEEEccchhhhHhhcCCcceEEEEEEecCchh
Q psy7108         289 ----------LLDISITPQSVKEALADKDYAKALMMSLKLNEQG  322 (703)
Q Consensus       289 ----------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~~  322 (703)
                                ..+++|+|++  .++++++.++.+++ |+++...
T Consensus       308 ~~~~~~~~~~v~~~~~s~~~--~~l~s~~~dg~v~i-w~~~~~~  348 (369)
T 3zwl_B          308 IGRVQGHFGPLNTVAISPQG--TSYASGGEDGFIRL-HHFEKSY  348 (369)
T ss_dssp             EEEEECCSSCEEEEEECTTS--SEEEEEETTSEEEE-EEECHHH
T ss_pred             hhheecccCcEEEEEECCCC--CEEEEEcCCCeEEE-EECcccc
Confidence                      1347888888  78889999999998 9887653

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=99.96  E-value=2.3e-27  Score=249.48  Aligned_cols=265  Identities=17%  Similarity=0.206  Sum_probs=208.9

Q ss_pred             CCCccccccccCCCcCeEEEEEcCCCC-CCEEEEEeCCCcEEEEEcCCCc-----eeEEEecCCCcEEEEEEecCCCEEE
Q psy7108          34 AARVLKPEVLSGHEGPVSCIEFSPVLS-STGMVSASWDKTVKLWNAVETD-----TQHETIQLLSDALCVAYKPDGTEIV  107 (703)
Q Consensus        34 tg~~~~~~~l~gH~~~V~~l~~sp~~d-g~~L~sgs~Dg~V~iWd~~~~~-----~~~~~~~~~~~V~~v~~spdg~~la  107 (703)
                      +.++.  .+|+||++.|++++|+|  + +++|+|||.||+|+|||+.+.+     ....+..|...|.+++|+|++++|+
T Consensus        27 ~~~l~--~tL~GH~~~V~~v~~sp--~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~  102 (340)
T 4aow_A           27 QMTLR--GTLKGHNGWVTQIATTP--QFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFAL  102 (340)
T ss_dssp             EEEEE--EEECCCSSCEEEEEECT--TCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred             ceEEE--EEECCccCCEEEEEEeC--CCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEE
Confidence            44555  78999999999999999  6 6899999999999999997654     2344556899999999999999999


Q ss_pred             EEECCCeEEEEEcCCCcEEEEEeccccCCC-------------CC----------CCCccchhhcccCCccEEEEEEcCC
Q psy7108         108 VATLDGQLIMFDVESAAQVGSVEARRDLDS-------------GR----------LDTDLVTREQSLKAKAVSTVCYSAD  164 (703)
Q Consensus       108 s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~-------------~~----------~~~~~~~~~~~~~~~~V~~i~~spd  164 (703)
                      +++.|+.|++|+............+.....             +.          ............|...+..++|+++
T Consensus       103 s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~  182 (340)
T 4aow_A          103 SGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPN  182 (340)
T ss_dssp             EEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSC
T ss_pred             EEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccC
Confidence            999999999999988876655544322110             00          0001112233457788999999886


Q ss_pred             C--CEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCc
Q psy7108         165 G--SCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGD  242 (703)
Q Consensus       165 g--~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~  242 (703)
                      +  ..+++++.|+.|++||+++++.+..+..+.        ..|++++|+|+++++++++.++      .|++||+++++
T Consensus       183 ~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~--------~~v~~~~~s~~~~~l~s~s~Dg------~i~iwd~~~~~  248 (340)
T 4aow_A          183 SSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHT--------GYLNTVTVSPDGSLCASGGKDG------QAMLWDLNEGK  248 (340)
T ss_dssp             SSSCEEEEEETTSCEEEEETTTTEEEEEECCCS--------SCEEEEEECTTSSEEEEEETTC------EEEEEETTTTE
T ss_pred             CCCcEEEEEcCCCEEEEEECCCCceeeEecCCC--------CcEEEEEECCCCCEEEEEeCCC------eEEEEEeccCc
Confidence            4  578899999999999999999888876544        4899999999999999888764      89999999998


Q ss_pred             cceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecc---------------eeeeEEEccchhhhHhhcC
Q psy7108         243 MAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDP---------------FLLDISITPQSVKEALADK  306 (703)
Q Consensus       243 ~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~---------------~~~~~~~spd~~~~~l~sg  306 (703)
                      .+..+..+ ..|.+++|+|++.++ +++.|+ |++||++++.....               ...+++|+|++  .+|+++
T Consensus       249 ~~~~~~~~-~~v~~~~~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg--~~l~sg  324 (340)
T 4aow_A          249 HLYTLDGG-DIINALCFSPNRYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADG--QTLFAG  324 (340)
T ss_dssp             EEEEEECS-SCEEEEEECSSSSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTS--SEEEEE
T ss_pred             eeeeecCC-ceEEeeecCCCCcee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCC--CEEEEE
Confidence            87766654 579999999988655 455677 99999988765332               23578999999  889999


Q ss_pred             CcceEEEEEEecCch
Q psy7108         307 DYAKALMMSLKLNEQ  321 (703)
Q Consensus       307 ~~~~~l~la~~l~~~  321 (703)
                      +.|+.+++ |++...
T Consensus       325 s~Dg~v~i-W~~~tG  338 (340)
T 4aow_A          325 YTDNLVRV-WQVTIG  338 (340)
T ss_dssp             ETTSCEEE-EEEEC-
T ss_pred             eCCCEEEE-EeCCCc
Confidence            99999999 988654

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=99.96  E-value=1.4e-28  Score=263.47  Aligned_cols=214  Identities=11%  Similarity=0.162  Sum_probs=173.4

Q ss_pred             ceeecc-CC--CccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc---eeEEEecCCCcEEEEEEec
Q psy7108          28 VKKGDM-AA--RVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD---TQHETIQLLSDALCVAYKP  101 (703)
Q Consensus        28 v~~~d~-tg--~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~---~~~~~~~~~~~V~~v~~sp  101 (703)
                      +++|+. ++  +++  ..+.+|.+.|++++|+|  ++++|++|+.|++|++||+.++.   .......|...|.+++|+|
T Consensus        35 i~iw~~~~~~~~~~--~~~~~h~~~v~~~~~s~--~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~  110 (377)
T 3dwl_C           35 VELYEQDGNGWKHA--RTFSDHDKIVTCVDWAP--KSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSP  110 (377)
T ss_dssp             BCEEEEETTEEEEC--CCBCCCSSCEEEEEECT--TTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCT
T ss_pred             EEEEEccCCceEEE--EEEecCCceEEEEEEeC--CCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECC
Confidence            566664 44  566  88999999999999999  99999999999999999998875   4566667999999999999


Q ss_pred             CCCEEEEEECCCeEEEEEcCCCcE---EEEEec-cccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcE
Q psy7108         102 DGTEIVVATLDGQLIMFDVESAAQ---VGSVEA-RRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYI  177 (703)
Q Consensus       102 dg~~las~s~dg~I~vwd~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I  177 (703)
                      +++.|++++.|+.|++||+++++.   ...+.. |.                    ..|.+++|+|++++|++++.|+.|
T Consensus       111 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~--------------------~~v~~~~~~~~~~~l~~~~~d~~i  170 (377)
T 3dwl_C          111 NEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLR--------------------STILSLDWHPNNVLLAAGCADRKA  170 (377)
T ss_dssp             TSSCCEEEESSSCEEECCC-----CCCCEEECSSCC--------------------SCEEEEEECTTSSEEEEEESSSCE
T ss_pred             CCCEEEEEecCCeEEEEEECCcccceeeeEeecccC--------------------CCeEEEEEcCCCCEEEEEeCCCEE
Confidence            999999999999999999998763   455554 43                    489999999999999999999999


Q ss_pred             EEEECCCCc------------------eEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC
Q psy7108         178 CIYSSREGI------------------LLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK  239 (703)
Q Consensus       178 ~lwD~~~~~------------------~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~  239 (703)
                      ++||++...                  ++..+         +|...|.+++|+|+|+++++++.++      .|++||+.
T Consensus       171 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~v~~~~~sp~~~~l~~~~~d~------~i~iwd~~  235 (377)
T 3dwl_C          171 YVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY---------PSGGWVHAVGFSPSGNALAYAGHDS------SVTIAYPS  235 (377)
T ss_dssp             EEEEECCSSCC-CCCSCSSCSCCCEEEEEECC---------CCSSSEEEEEECTTSSCEEEEETTT------EEC-CEEC
T ss_pred             EEEEEEecccCCCccccccccccchhhhhhcc---------cCCceEEEEEECCCCCEEEEEeCCC------cEEEEECC
Confidence            999996432                  22222         4566899999999999999888764      89999999


Q ss_pred             CCcc----ceeecCCccceEEEEEcCCCCEEEEEeCCCEEEEEcC
Q psy7108         240 KGDM----AARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYSLD  280 (703)
Q Consensus       240 ~~~~----~~~~~~h~~~V~~l~~spdg~~l~s~s~Dgv~iwd~~  280 (703)
                      +++.    +..+..|...|.+++|+|++++|++++.+++.+|+..
T Consensus       236 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~  280 (377)
T 3dwl_C          236 APEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQGN  280 (377)
T ss_dssp             STTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEEEECCC
T ss_pred             CCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEEEEEeC
Confidence            9987    7788899999999999999999999988887688765

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=99.96  E-value=5.2e-28  Score=260.25  Aligned_cols=215  Identities=16%  Similarity=0.268  Sum_probs=184.2

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEE-----ecCCCcEEEEEEec-CCCEEEEEECCCe
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHET-----IQLLSDALCVAYKP-DGTEIVVATLDGQ  114 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~-----~~~~~~V~~v~~sp-dg~~las~s~dg~  114 (703)
                      +++.+|.+.|.+++|+|. ++..|++|+.|++|++||+.+++.....     ..|...|.+++|+| +++.+++|+.|++
T Consensus       151 ~~~~gh~~~v~~~~~~~~-~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~  229 (380)
T 3iz6_a          151 RVLTGHKGYASSCQYVPD-QETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTT  229 (380)
T ss_dssp             CBCCCCSSCCCCCBCCSS-SSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSC
T ss_pred             eeccCCCcceEEEEEecC-CCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCe
Confidence            678999999999999993 3567999999999999999998766555     45888999999987 8899999999999


Q ss_pred             EEEEEcC-CCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEe
Q psy7108         115 LIMFDVE-SAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTI  193 (703)
Q Consensus       115 I~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~  193 (703)
                      |++||++ +++.+..+.+|..                    .|.+++|+|++++|++|+.|++|++||++++.++..+..
T Consensus       230 v~~wd~~~~~~~~~~~~~h~~--------------------~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~  289 (380)
T 3iz6_a          230 VRLWDLRITSRAVRTYHGHEG--------------------DINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNR  289 (380)
T ss_dssp             EEEEETTTTCCCCEEECCCSS--------------------CCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECC
T ss_pred             EEEEECCCCCcceEEECCcCC--------------------CeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecc
Confidence            9999998 4566777777654                    899999999999999999999999999999998888765


Q ss_pred             ccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceee----cCCccceEEEEEcCCCCEEEEE
Q psy7108         194 TQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARV----LKPEVRVFCVKFSPTGQAWVAA  269 (703)
Q Consensus       194 ~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~----~~h~~~V~~l~~spdg~~l~s~  269 (703)
                      +... ...+...+.+++|+|+|+++++++.++      .|++||..+++....+    .+|...|.+++|+|+|++|++|
T Consensus       290 ~~~~-~~~~~~~v~~~~~s~~g~~l~~g~~dg------~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sg  362 (380)
T 3iz6_a          290 EPDR-NDNELPIVTSVAFSISGRLLFAGYSNG------DCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTG  362 (380)
T ss_dssp             CCSS-SCCSSCSCSEEEECSSSSEEEEECTTS------CEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEE
T ss_pred             cccc-cccccCceEEEEECCCCCEEEEEECCC------CEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEe
Confidence            4331 122334689999999999999988764      8999999988876665    5799999999999999999999


Q ss_pred             eCCC-EEEEEcCCCc
Q psy7108         270 TTEG-VHIYSLDSGY  283 (703)
Q Consensus       270 s~Dg-v~iwd~~~~~  283 (703)
                      +.|+ |++|++...+
T Consensus       363 s~D~~i~iW~~~~~~  377 (380)
T 3iz6_a          363 SWDKNLKIWAFSGHR  377 (380)
T ss_dssp             CTTSCEEEEECCSSS
T ss_pred             eCCCCEEEEecCCCc
Confidence            9999 9999997654

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=99.96  E-value=2.5e-27  Score=256.78  Aligned_cols=259  Identities=13%  Similarity=0.182  Sum_probs=211.9

Q ss_pred             ceeec-cCCCccccccccC-CCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCE
Q psy7108          28 VKKGD-MAARVLKPEVLSG-HEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTE  105 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l~g-H~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~  105 (703)
                      +++|+ .+++..  ..+.. |.+.|++++|+|  ++++|++|+.||.|++||+.+++.......|...|.+++|+  ++.
T Consensus       115 v~lw~~~~~~~~--~~~~~~~~~~v~~v~~s~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~  188 (401)
T 4aez_A          115 VYVWNADSGSVS--ALAETDESTYVASVKWSH--DGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWN--RHV  188 (401)
T ss_dssp             EEEEETTTCCEE--EEEECCTTCCEEEEEECT--TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEE--TTE
T ss_pred             EEEeeCCCCcEe--EeeecCCCCCEEEEEECC--CCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEEC--CCE
Confidence            55566 366666  55554 899999999999  99999999999999999999988888888899999999994  679


Q ss_pred             EEEEECCCeEEEEEcC-CCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCC
Q psy7108         106 IVVATLDGQLIMFDVE-SAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSRE  184 (703)
Q Consensus       106 las~s~dg~I~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~  184 (703)
                      +++++.||.|++||++ .+.....+.+|..                    .|.+++|+|++++|++++.|+.|++||+++
T Consensus       189 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~--------------------~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~  248 (401)
T 4aez_A          189 LSSGSRSGAIHHHDVRIANHQIGTLQGHSS--------------------EVCGLAWRSDGLQLASGGNDNVVQIWDARS  248 (401)
T ss_dssp             EEEEETTSEEEEEETTSSSCEEEEEECCSS--------------------CEEEEEECTTSSEEEEEETTSCEEEEETTC
T ss_pred             EEEEcCCCCEEEEecccCcceeeEEcCCCC--------------------CeeEEEEcCCCCEEEEEeCCCeEEEccCCC
Confidence            9999999999999998 4566777777654                    899999999999999999999999999999


Q ss_pred             CceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCC
Q psy7108         185 GILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQ  264 (703)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~  264 (703)
                      ++.+..+..+.        ..|.+++|+|++..+++.+++..+   ..|++||+.+++....+. +...|.+++|+|+++
T Consensus       249 ~~~~~~~~~~~--------~~v~~~~~~p~~~~ll~~~~gs~d---~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~  316 (401)
T 4aez_A          249 SIPKFTKTNHN--------AAVKAVAWCPWQSNLLATGGGTMD---KQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSK  316 (401)
T ss_dssp             SSEEEEECCCS--------SCCCEEEECTTSTTEEEEECCTTT---CEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSS
T ss_pred             CCccEEecCCc--------ceEEEEEECCCCCCEEEEecCCCC---CEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCC
Confidence            98887776443        489999999988776665431111   489999999998877664 567899999999999


Q ss_pred             EEEEEe--CCC-EEEEEcCCCceecc--------eeeeEEEccchhhhHhhcCCcceEEEEEEecCchhHHHHH
Q psy7108         265 AWVAAT--TEG-VHIYSLDSGYVFDP--------FLLDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIHV  327 (703)
Q Consensus       265 ~l~s~s--~Dg-v~iwd~~~~~~~~~--------~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~~~~~~v  327 (703)
                      .+++++  .|| |++|++.++.....        ....++|+|++  ..+++++.++.+.+ |++.....+.+.
T Consensus       317 ~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg--~~l~s~~~dg~i~i-w~~~~~~~~~~~  387 (401)
T 4aez_A          317 EIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDG--RILSTAASDENLKF-WRVYDGDHVKRP  387 (401)
T ss_dssp             EEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTS--SEEEEECTTSEEEE-EECCC-------
T ss_pred             eEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCC--CEEEEEeCCCcEEE-EECCCCcccccc
Confidence            998854  788 99999988655333        23568999999  88999999999999 999877655543

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=99.96  E-value=1.3e-27  Score=278.01  Aligned_cols=245  Identities=17%  Similarity=0.262  Sum_probs=205.9

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc-----eeEEEecCCCcEEEEEEecCCCEEEEEECCCeE
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD-----TQHETIQLLSDALCVAYKPDGTEIVVATLDGQL  115 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~-----~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I  115 (703)
                      ..+.+|++.|++++|+|. ++++|+|||.|++|++|++.+..     ....+..|...|.+++|+|++++|++|+.|++|
T Consensus       376 ~~l~~H~~~V~~v~~~~~-~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v  454 (694)
T 3dm0_A          376 GTMRAHTDMVTAIATPID-NADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGEL  454 (694)
T ss_dssp             EEEECCSSCEEEEECCTT-CCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred             hhcccCCceeEEEEecCC-CCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcE
Confidence            568899999999999983 45799999999999999997543     234566799999999999999999999999999


Q ss_pred             EEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEecc
Q psy7108         116 IMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQ  195 (703)
Q Consensus       116 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~  195 (703)
                      ++||+.+++....+.+|..                    .|.+++|+|+++.|++|+.|++|++||....... .+.   
T Consensus       455 ~vwd~~~~~~~~~~~~h~~--------------------~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~-~~~---  510 (694)
T 3dm0_A          455 RLWDLAAGVSTRRFVGHTK--------------------DVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKY-TIS---  510 (694)
T ss_dssp             EEEETTTTEEEEEEECCSS--------------------CEEEEEECTTSSCEEEEETTSCEEEECTTSCEEE-EEC---
T ss_pred             EEEECCCCcceeEEeCCCC--------------------CEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcce-eec---
Confidence            9999999999998888765                    8999999999999999999999999998754332 221   


Q ss_pred             CCccccccccceeeeeccCC--CEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC
Q psy7108         196 NKSLDGINDFINRRKMTEFG--NVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG  273 (703)
Q Consensus       196 ~~~~~~~~~~v~~~~~spdg--~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg  273 (703)
                       ....+|...|.+++|+|++  ..+++++.+      +.|++||+++++....+.+|...|.+++|+|++++|++++.|+
T Consensus       511 -~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d------~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg  583 (694)
T 3dm0_A          511 -EGGEGHRDWVSCVRFSPNTLQPTIVSASWD------KTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDG  583 (694)
T ss_dssp             -SSTTSCSSCEEEEEECSCSSSCEEEEEETT------SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred             -cCCCCCCCcEEEEEEeCCCCcceEEEEeCC------CeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCC
Confidence             1234577789999999987  456666655      3899999999999889999999999999999999999999999


Q ss_pred             -EEEEEcCCCceecce-----eeeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108         274 -VHIYSLDSGYVFDPF-----LLDISITPQSVKEALADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       274 -v~iwd~~~~~~~~~~-----~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~  321 (703)
                       |++||+.+++.+..+     ...++|+|++  .+++.+. +..+++ |++...
T Consensus       584 ~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~--~~l~~~~-~~~i~i-wd~~~~  633 (694)
T 3dm0_A          584 VVLLWDLAEGKKLYSLEANSVIHALCFSPNR--YWLCAAT-EHGIKI-WDLESK  633 (694)
T ss_dssp             BCEEEETTTTEEEECCBCSSCEEEEEECSSS--SEEEEEE-TTEEEE-EETTTT
T ss_pred             eEEEEECCCCceEEEecCCCcEEEEEEcCCC--cEEEEEc-CCCEEE-EECCCC
Confidence             999999998875443     4678999998  5555544 455777 888754

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=99.96  E-value=5.1e-27  Score=254.22  Aligned_cols=265  Identities=17%  Similarity=0.215  Sum_probs=205.7

Q ss_pred             CCceEEecCCceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCC-------ceeEEEecC
Q psy7108          18 GGNVVLKLPGVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVET-------DTQHETIQL   90 (703)
Q Consensus        18 ~~~~~i~~~~v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~-------~~~~~~~~~   90 (703)
                      +.+..+.+|+........+.+  ..+.+|.++|++++|+|. ++++|++|+.||+|++||+.++       .....+..|
T Consensus        54 ~~~g~i~v~~~~~~~~~~~~~--~~~~~h~~~V~~~~~~p~-~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h  130 (402)
T 2aq5_A           54 SGGGAFLVLPLGKTGRVDKNV--PLVCGHTAPVLDIAWCPH-NDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGH  130 (402)
T ss_dssp             SSSCCEEEEETTCCEECCTTC--CCBCCCSSCEEEEEECTT-CTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECC
T ss_pred             cCCCEEEEEECccCCCCCCCC--ceEecCCCCEEEEEeCCC-CCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCC
Confidence            334445555443211111344  678899999999999995 6889999999999999999887       456677789


Q ss_pred             CCcEEEEEEecCC-CEEEEEECCCeEEEEEcCCCcEEEEE--eccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCE
Q psy7108          91 LSDALCVAYKPDG-TEIVVATLDGQLIMFDVESAAQVGSV--EARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSC  167 (703)
Q Consensus        91 ~~~V~~v~~spdg-~~las~s~dg~I~vwd~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~  167 (703)
                      ...|.+++|+|++ ..|++++.|+.|++||+++++.+..+  ..|..                    .|.+++|+|++++
T Consensus       131 ~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~--------------------~v~~~~~~~~~~~  190 (402)
T 2aq5_A          131 TKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPD--------------------TIYSVDWSRDGAL  190 (402)
T ss_dssp             SSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCS--------------------CEEEEEECTTSSC
T ss_pred             CCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCC--------------------ceEEEEECCCCCE
Confidence            9999999999998 69999999999999999999988888  55544                    8999999999999


Q ss_pred             EEEEecCCcEEEEECCCCceEEEE-EeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcc-ce
Q psy7108         168 ILAAGQSKYICIYSSREGILLKKF-TITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDM-AA  245 (703)
Q Consensus       168 l~s~s~dg~I~lwD~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~-~~  245 (703)
                      |++++.|+.|++||+++++.+..+ ..+..       ..+.++.|+|+++.++++....   .+..|++||+++++. ..
T Consensus       191 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~g~~~~---~d~~i~iwd~~~~~~~~~  260 (402)
T 2aq5_A          191 ICTSCRDKRVRVIEPRKGTVVAEKDRPHEG-------TRPVHAVFVSEGKILTTGFSRM---SERQVALWDTKHLEEPLS  260 (402)
T ss_dssp             EEEEETTSEEEEEETTTTEEEEEEECSSCS-------SSCCEEEECSTTEEEEEEECTT---CCEEEEEEETTBCSSCSE
T ss_pred             EEEEecCCcEEEEeCCCCceeeeeccCCCC-------CcceEEEEcCCCcEEEEeccCC---CCceEEEEcCccccCCce
Confidence            999999999999999999988877 34333       1478899999999888873211   115899999998764 32


Q ss_pred             ee-cCCccceEEEEEcCCCCEEEE-EeCCC-EEEEEcCCCce----ec-----ceeeeEEEccchhhhHhhcCCcceEEE
Q psy7108         246 RV-LKPEVRVFCVKFSPTGQAWVA-ATTEG-VHIYSLDSGYV----FD-----PFLLDISITPQSVKEALADKDYAKALM  313 (703)
Q Consensus       246 ~~-~~h~~~V~~l~~spdg~~l~s-~s~Dg-v~iwd~~~~~~----~~-----~~~~~~~~spd~~~~~l~sg~~~~~l~  313 (703)
                      .. ..|...+.+++|+|+++.+++ ++.|+ |++|++.+++.    +.     ....+++|+|++  .++++++  +.++
T Consensus       261 ~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~--~~~~s~~--~~~~  336 (402)
T 2aq5_A          261 LQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKR--GLEVNKC--EIAR  336 (402)
T ss_dssp             EEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGG--GSCGGGT--EEEE
T ss_pred             EEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccc--ccceecc--eeEE
Confidence            22 357788999999999999965 55788 99999998773    21     224679999999  5666543  4666


Q ss_pred             EEEecCc
Q psy7108         314 MSLKLNE  320 (703)
Q Consensus       314 la~~l~~  320 (703)
                      + |++..
T Consensus       337 ~-~~l~~  342 (402)
T 2aq5_A          337 F-YKLHE  342 (402)
T ss_dssp             E-EEEET
T ss_pred             E-EEcCC
Confidence            5 66653

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=99.96  E-value=4.1e-27  Score=244.18  Aligned_cols=234  Identities=14%  Similarity=0.213  Sum_probs=181.2

Q ss_pred             eeecccCCceEEecCC--ceeeccC---CCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc--ee
Q psy7108          12 TRETHEGGNVVLKLPG--VKKGDMA---ARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD--TQ   84 (703)
Q Consensus        12 ~~~~~~~~~~~i~~~~--v~~~d~t---g~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~--~~   84 (703)
                      ..|...|...+....+  +++|+..   ++++  .++.+|.++|++++|+|..++++|+||+.|++|++||+.++.  ..
T Consensus        15 ~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~--~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~   92 (297)
T 2pm7_B           15 AVMDYYGKRMATCSSDKTIKIFEVEGETHKLI--DTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQI   92 (297)
T ss_dssp             EEECTTSSEEEEEETTSCEEEEEBCSSCBCCC--EEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCC
T ss_pred             EEECCCCCEEEEEeCCCEEEEEecCCCCcEEE--EEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEE
Confidence            3444444444433333  6677643   3566  889999999999999861138999999999999999998764  34


Q ss_pred             EEEecCCCcEEEEEEecC--CCEEEEEECCCeEEEEEcCCCcE--EEEEeccccCCCCCCCCccchhhcccCCccEEEEE
Q psy7108          85 HETIQLLSDALCVAYKPD--GTEIVVATLDGQLIMFDVESAAQ--VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVC  160 (703)
Q Consensus        85 ~~~~~~~~~V~~v~~spd--g~~las~s~dg~I~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~  160 (703)
                      .....|...|.+++|+|+  +.+|++++.|+.|++||++++..  ...+.+|.                    ..|.+++
T Consensus        93 ~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~--------------------~~v~~~~  152 (297)
T 2pm7_B           93 AVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHA--------------------IGVNSAS  152 (297)
T ss_dssp             EEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCS--------------------SCEEEEE
T ss_pred             EEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeeccc--------------------CccceEe
Confidence            455568999999999998  89999999999999999987632  23444544                    4899999


Q ss_pred             EcCC-------------CCEEEEEecCCcEEEEECCCCc----eEEEEEeccCCccccccccceeeeeccCC---CEEEE
Q psy7108         161 YSAD-------------GSCILAAGQSKYICIYSSREGI----LLKKFTITQNKSLDGINDFINRRKMTEFG---NVSLI  220 (703)
Q Consensus       161 ~spd-------------g~~l~s~s~dg~I~lwD~~~~~----~~~~~~~~~~~~~~~~~~~v~~~~~spdg---~~l~~  220 (703)
                      |+|+             +++|++|+.|++|++||++++.    ....+.        +|...|.+++|+|++   .++++
T Consensus       153 ~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~--------~H~~~V~~v~~sp~~~~~~~las  224 (297)
T 2pm7_B          153 WAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE--------GHSDWVRDVAWSPTVLLRSYMAS  224 (297)
T ss_dssp             ECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEEC--------CCSSCEEEEEECCCCSSSEEEEE
T ss_pred             ecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEec--------CCCCceEEEEECCCCCCceEEEE
Confidence            9997             5799999999999999998765    333443        455699999999995   66666


Q ss_pred             EcccCCCCCeeEEECCCCCCCcc---ceee--cCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCC
Q psy7108         221 ETRETHEGGNVVLKLPGVKKGDM---AARV--LKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDS  281 (703)
Q Consensus       221 ~~~~~~~~~~~~i~iwd~~~~~~---~~~~--~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~  281 (703)
                      ++.+      +.|++||+++...   ...+  ..|...|.+++|+|+|++|++++.|+ |++|+...
T Consensus       225 ~s~D------~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~  285 (297)
T 2pm7_B          225 VSQD------RTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL  285 (297)
T ss_dssp             EETT------SCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred             EECC------CcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence            6655      3899999876431   1122  46788999999999999999999999 99999763

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=99.96  E-value=2.1e-27  Score=249.38  Aligned_cols=250  Identities=13%  Similarity=0.170  Sum_probs=204.1

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc----eeEEEecCCCcEEEEEEec--CCCEEEEEECCCe
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD----TQHETIQLLSDALCVAYKP--DGTEIVVATLDGQ  114 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~----~~~~~~~~~~~V~~v~~sp--dg~~las~s~dg~  114 (703)
                      ..+.+|.+.|++++|+|  ++++|++|+.||+|++||+.++.    ....+..|...|.+++|+|  ++++|++++.||.
T Consensus         5 ~~~~gH~~~v~~~~~~~--~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~   82 (351)
T 3f3f_A            5 PFDSGHDDLVHDVVYDF--YGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKT   82 (351)
T ss_dssp             CEECCCSSCEEEEEECS--SSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred             ccCcccccceeEEEEcC--CCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCe
Confidence            56789999999999999  99999999999999999998764    3344557999999999999  6999999999999


Q ss_pred             EEEEEcCCC---------cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC--CCEEEEEecCCcEEEEECC
Q psy7108         115 LIMFDVESA---------AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD--GSCILAAGQSKYICIYSSR  183 (703)
Q Consensus       115 I~vwd~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd--g~~l~s~s~dg~I~lwD~~  183 (703)
                      |++||++++         +.+..+..|.                    ..|.+++|+|+  ++++++++.|+.|++||++
T Consensus        83 v~vwd~~~~~~~~~~~~~~~~~~~~~~~--------------------~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~  142 (351)
T 3f3f_A           83 VKLWEEDPDQEECSGRRWNKLCTLNDSK--------------------GSLYSVKFAPAHLGLKLACLGNDGILRLYDAL  142 (351)
T ss_dssp             EEEEEECTTSCTTSSCSEEEEEEECCCS--------------------SCEEEEEECCGGGCSEEEEEETTCEEEEEECS
T ss_pred             EEEEecCCCcccccccCcceeeeecccC--------------------CceeEEEEcCCCCCcEEEEecCCCcEEEecCC
Confidence            999999887         4455555554                    38999999999  9999999999999999999


Q ss_pred             CCceEEEEEec-----cCCccccccccceeeeeccC---CCEEEEEcccCCCCCeeEEECCCCCCCcc--ceeecCCccc
Q psy7108         184 EGILLKKFTIT-----QNKSLDGINDFINRRKMTEF---GNVSLIETRETHEGGNVVLKLPGVKKGDM--AARVLKPEVR  253 (703)
Q Consensus       184 ~~~~~~~~~~~-----~~~~~~~~~~~v~~~~~spd---g~~l~~~~~~~~~~~~~~i~iwd~~~~~~--~~~~~~h~~~  253 (703)
                      +++.+..+...     ......++...+.+++|+|+   +..+++++.++      .+.+|+...++.  ...+.+|...
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~------~~~~~~~~~~~~~~~~~~~~h~~~  216 (351)
T 3f3f_A          143 EPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQ------AIIYQRGKDGKLHVAAKLPGHKSL  216 (351)
T ss_dssp             STTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTE------EEEEEECTTSCEEEEEECCCCCSC
T ss_pred             ChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCC------cEEEEccCCCceeeeeecCCCCcc
Confidence            87654433211     11223356678999999997   88888877653      666776666654  5667789999


Q ss_pred             eEEEEEcCCC----CEEEEEeCCC-EEEEEcCCCc---------------------------------------------
Q psy7108         254 VFCVKFSPTG----QAWVAATTEG-VHIYSLDSGY---------------------------------------------  283 (703)
Q Consensus       254 V~~l~~spdg----~~l~s~s~Dg-v~iwd~~~~~---------------------------------------------  283 (703)
                      |.+++|+|++    ++|++++.|| |++||+.++.                                             
T Consensus       217 i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (351)
T 3f3f_A          217 IRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQV  296 (351)
T ss_dssp             EEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEE
T ss_pred             eeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccc
Confidence            9999999998    7899999999 9999997641                                             


Q ss_pred             -ee------cceeeeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108         284 -VF------DPFLLDISITPQSVKEALADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       284 -~~------~~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~  321 (703)
                       ..      .....+++|+|++  .++++++.|+.+++ |+++..
T Consensus       297 ~~~~~~~~h~~~v~~~~~s~~~--~~l~s~~~dg~v~i-w~~~~~  338 (351)
T 3f3f_A          297 ELLSEHDDHNGEVWSVSWNLTG--TILSSAGDDGKVRL-WKATYS  338 (351)
T ss_dssp             EEEEEECTTSSCEEEEEECSSS--CCEEEEETTSCEEE-EEECTT
T ss_pred             cEEEEEecccccEEEEEEcCCC--CEEEEecCCCcEEE-EecCcC
Confidence             11      1224679999999  89999999999999 998754

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=99.96  E-value=5.5e-28  Score=260.48  Aligned_cols=255  Identities=11%  Similarity=0.143  Sum_probs=206.9

Q ss_pred             ccccCCCcCeEEEEEcCCCC----C---CEEEEEeCCCcEEEEEcCCCce-----eEEEecC-----CCcEEEEEEe---
Q psy7108          41 EVLSGHEGPVSCIEFSPVLS----S---TGMVSASWDKTVKLWNAVETDT-----QHETIQL-----LSDALCVAYK---  100 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~d----g---~~L~sgs~Dg~V~iWd~~~~~~-----~~~~~~~-----~~~V~~v~~s---  100 (703)
                      ..+.+|..+|++++|+|  +    +   .+|++++.||.|++||+.++..     ......|     ...|.+++|+   
T Consensus        56 ~~~~~h~~~v~~~~~~~--~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  133 (397)
T 1sq9_A           56 YSHFVHKSGLHHVDVLQ--AIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASN  133 (397)
T ss_dssp             EEEECCTTCEEEEEEEE--EEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC
T ss_pred             eEEecCCCcEEEEEEec--ccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeecc
Confidence            78889999999999999  9    9   9999999999999999988765     6666667     4899999999   


Q ss_pred             -cCCCE-EEEEECCCeEEEEEcCC------CcEEE-----EEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCE
Q psy7108         101 -PDGTE-IVVATLDGQLIMFDVES------AAQVG-----SVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSC  167 (703)
Q Consensus       101 -pdg~~-las~s~dg~I~vwd~~~------~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~  167 (703)
                       |+++. |++++.||.|++||+++      ++.+.     .+.+..             .....|...|.+++|+|++ .
T Consensus       134 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~i~~~~~~~~~-~  199 (397)
T 1sq9_A          134 DRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTV-------------ESPMTPSQFATSVDISERG-L  199 (397)
T ss_dssp             ----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEE-------------CCSSSSCCCCCEEEECTTS-E
T ss_pred             CCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeee-------------ccccCCCCCceEEEECCCc-e
Confidence             99999 99999999999999987      54443     443200             0001234589999999999 9


Q ss_pred             EEEEecCCcEEEEECCCCceEEEEEeccCCccccc---cccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccc
Q psy7108         168 ILAAGQSKYICIYSSREGILLKKFTITQNKSLDGI---NDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMA  244 (703)
Q Consensus       168 l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~  244 (703)
                      +++++.|+.|++||+++++.+..+...     .+|   ...+.+++|+|+++.+++++.++   ....|++||+++++.+
T Consensus       200 l~~~~~dg~i~i~d~~~~~~~~~~~~~-----~~h~~~~~~i~~i~~~~~~~~l~~~~~d~---~~g~i~i~d~~~~~~~  271 (397)
T 1sq9_A          200 IATGFNNGTVQISELSTLRPLYNFESQ-----HSMINNSNSIRSVKFSPQGSLLAIAHDSN---SFGCITLYETEFGERI  271 (397)
T ss_dssp             EEEECTTSEEEEEETTTTEEEEEEECC-----C---CCCCCEEEEEECSSTTEEEEEEEET---TEEEEEEEETTTCCEE
T ss_pred             EEEEeCCCcEEEEECCCCceeEEEecc-----ccccccCCccceEEECCCCCEEEEEecCC---CCceEEEEECCCCccc
Confidence            999999999999999999988888751     012   34899999999999999887651   1138999999999988


Q ss_pred             eeecC-------------CccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecce----------------------
Q psy7108         245 ARVLK-------------PEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPF----------------------  288 (703)
Q Consensus       245 ~~~~~-------------h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~----------------------  288 (703)
                      ..+..             |...|.+++|+|++++|++++.|+ |++||+.+++....+                      
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  351 (397)
T 1sq9_A          272 GSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDS  351 (397)
T ss_dssp             EEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCB
T ss_pred             ceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhcccccccc
Confidence            88888             999999999999999999999999 999999988764333                      


Q ss_pred             -----eeeEEEccchhh--------hHhhcCCcceEEEEEEecCc
Q psy7108         289 -----LLDISITPQSVK--------EALADKDYAKALMMSLKLNE  320 (703)
Q Consensus       289 -----~~~~~~spd~~~--------~~l~sg~~~~~l~la~~l~~  320 (703)
                           ..+++|+|++..        .++++++.++.+.+ |++..
T Consensus       352 ~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~i-w~~~~  395 (397)
T 1sq9_A          352 LAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRW-FREAG  395 (397)
T ss_dssp             CSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEE-EEEEC
T ss_pred             ccCCceeEEEeccccccccccccccceEEEecCCCcEEE-EEcCC
Confidence                 356899999721        37888999999998 88754

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=99.96  E-value=5e-28  Score=262.29  Aligned_cols=259  Identities=12%  Similarity=0.139  Sum_probs=214.7

Q ss_pred             ceeeccCC-----CccccccccCCCcCeEEEEEcCCCC-CCEEEEEeCCCcEEEEEcCCCc------eeEE---EecCCC
Q psy7108          28 VKKGDMAA-----RVLKPEVLSGHEGPVSCIEFSPVLS-STGMVSASWDKTVKLWNAVETD------TQHE---TIQLLS   92 (703)
Q Consensus        28 v~~~d~tg-----~~~~~~~l~gH~~~V~~l~~sp~~d-g~~L~sgs~Dg~V~iWd~~~~~------~~~~---~~~~~~   92 (703)
                      +++|+...     +.+  ..+.+|.+.|++++|+|  + +.+|++++.||+|++||+.++.      ....   ...|..
T Consensus        91 v~vw~~~~~~~~~~~~--~~~~~h~~~v~~~~~~~--~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~  166 (416)
T 2pm9_A           91 LELYSTNEANNAINSM--ARFSNHSSSVKTVKFNA--KQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVD  166 (416)
T ss_dssp             EEEECCSSTTSCCCEE--EECCCSSSCCCEEEECS--SSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSC
T ss_pred             EEEeecccccccccch--hhccCCccceEEEEEcC--CCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCC
Confidence            66676443     466  88899999999999999  7 8999999999999999998875      3322   246888


Q ss_pred             cEEEEEEecC-CCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCC-CEEEE
Q psy7108          93 DALCVAYKPD-GTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADG-SCILA  170 (703)
Q Consensus        93 ~V~~v~~spd-g~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg-~~l~s  170 (703)
                      .|.+++|+|+ +..+++++.|+.|++||+++++.+..+..+..              ...|...|.+++|+|++ .++++
T Consensus       167 ~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~--------------~~~~~~~v~~~~~~~~~~~~l~~  232 (416)
T 2pm9_A          167 EVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSP--------------NSGIKQQLSVVEWHPKNSTRVAT  232 (416)
T ss_dssp             CCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCC--------------SSCCCCCEEEEEECSSCTTEEEE
T ss_pred             CeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEecccc--------------ccccCCceEEEEECCCCCCEEEE
Confidence            9999999999 78999999999999999999998888876531              01224589999999997 68999


Q ss_pred             EecCC---cEEEEECCCC-ceEEEEEeccCCccccccccceeeeecc-CCCEEEEEcccCCCCCeeEEECCCCCCCccce
Q psy7108         171 AGQSK---YICIYSSREG-ILLKKFTITQNKSLDGINDFINRRKMTE-FGNVSLIETRETHEGGNVVLKLPGVKKGDMAA  245 (703)
Q Consensus       171 ~s~dg---~I~lwD~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~sp-dg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~  245 (703)
                      ++.|+   .|++||++++ .+...+.       .+|...|.+++|+| +++.+++++.++      .|++||+++++.+.
T Consensus       233 ~~~d~~~~~i~~~d~~~~~~~~~~~~-------~~~~~~v~~~~~s~~~~~~l~s~~~dg------~v~~wd~~~~~~~~  299 (416)
T 2pm9_A          233 ATGSDNDPSILIWDLRNANTPLQTLN-------QGHQKGILSLDWCHQDEHLLLSSGRDN------TVLLWNPESAEQLS  299 (416)
T ss_dssp             EECCSSSCCCCEEETTSTTSCSBCCC-------SCCSSCEEEEEECSSCSSCEEEEESSS------EEEEECSSSCCEEE
T ss_pred             EECCCCCceEEEEeCCCCCCCcEEee-------cCccCceeEEEeCCCCCCeEEEEeCCC------CEEEeeCCCCccce
Confidence            99998   9999999986 3433332       04556899999999 888888887764      89999999999999


Q ss_pred             eecCCccceEEEEEcCCC-CEEEEEeCCC-EEEEEcCCCceec-------------------------------------
Q psy7108         246 RVLKPEVRVFCVKFSPTG-QAWVAATTEG-VHIYSLDSGYVFD-------------------------------------  286 (703)
Q Consensus       246 ~~~~h~~~V~~l~~spdg-~~l~s~s~Dg-v~iwd~~~~~~~~-------------------------------------  286 (703)
                      .+..|...|.+++|+|++ +++++++.|+ |++|++.++....                                     
T Consensus       300 ~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  379 (416)
T 2pm9_A          300 QFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAP  379 (416)
T ss_dssp             EEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCC
T ss_pred             eecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCC
Confidence            999999999999999999 8999999999 9999998765321                                     


Q ss_pred             ----ceeeeEEEccchhhhHhhcCCcceEEEEEEecCc
Q psy7108         287 ----PFLLDISITPQSVKEALADKDYAKALMMSLKLNE  320 (703)
Q Consensus       287 ----~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~  320 (703)
                          .....++|+|++  .+++.++.++.+++ |++..
T Consensus       380 ~~~~~~~~~~~~s~dg--~~la~~~~d~~v~~-w~~~~  414 (416)
T 2pm9_A          380 TWYGEPSPAAHWAFGG--KLVQITPDGKGVSI-TNPKI  414 (416)
T ss_dssp             STTCCCSCCCEEETTT--EEECBCTTSSCBCC-BCCCC
T ss_pred             ccccCCccceEEeeCC--eEEEEeCCCCeEEE-EEecc
Confidence                112368999999  89999999999998 88764

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=99.96  E-value=3.7e-27  Score=251.19  Aligned_cols=257  Identities=13%  Similarity=0.201  Sum_probs=207.2

Q ss_pred             ceeeccC-CC--ccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEE--EecCCCcEEEEEEecC
Q psy7108          28 VKKGDMA-AR--VLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHE--TIQLLSDALCVAYKPD  102 (703)
Q Consensus        28 v~~~d~t-g~--~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~--~~~~~~~V~~v~~spd  102 (703)
                      +++|+.. ++  ++  ..+.+|...|++++|+|  ++++|++++.||.|++||+.+++....  ...|...|.+++|+|+
T Consensus        32 v~i~~~~~~~~~~~--~~~~~h~~~v~~~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~  107 (372)
T 1k8k_C           32 VHIYEKSGNKWVQV--HELKEHNGQVTGVDWAP--DSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPN  107 (372)
T ss_dssp             EEEEEEETTEEEEE--EEEECCSSCEEEEEEET--TTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTT
T ss_pred             EEEEeCCCCcEEee--eeecCCCCcccEEEEeC--CCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCC
Confidence            5666644 43  66  88999999999999999  999999999999999999987753333  3568899999999999


Q ss_pred             CCEEEEEECCCeEEEEEcCCCcE---EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEE
Q psy7108         103 GTEIVVATLDGQLIMFDVESAAQ---VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICI  179 (703)
Q Consensus       103 g~~las~s~dg~I~vwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~l  179 (703)
                      +++|++++.|+.|++||+++++.   ...+..                   .|...|.+++|+|++++|++++.|+.|++
T Consensus       108 ~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~-------------------~~~~~i~~~~~~~~~~~l~~~~~dg~i~~  168 (372)
T 1k8k_C          108 EKKFAVGSGSRVISICYFEQENDWWVCKHIKK-------------------PIRSTVLSLDWHPNSVLLAAGSCDFKCRI  168 (372)
T ss_dssp             SSEEEEEETTSSEEEEEEETTTTEEEEEEECT-------------------TCCSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred             CCEEEEEeCCCEEEEEEecCCCcceeeeeeec-------------------ccCCCeeEEEEcCCCCEEEEEcCCCCEEE
Confidence            99999999999999999988763   222211                   12348999999999999999999999999


Q ss_pred             EECC------------------CCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC
Q psy7108         180 YSSR------------------EGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG  241 (703)
Q Consensus       180 wD~~------------------~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~  241 (703)
                      ||++                  .++++..+..        +...+.+++|+|+++.+++++.++      .|++||++++
T Consensus       169 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~v~~~~~~~~~~~l~~~~~d~------~i~i~d~~~~  234 (372)
T 1k8k_C          169 FSAYIKEVEERPAPTPWGSKMPFGELMFESSS--------SCGWVHGVCFSANGSRVAWVSHDS------TVCLADADKK  234 (372)
T ss_dssp             EECCCTTTSCCCCCBTTBSCCCTTCEEEECCC--------CSSCEEEEEECSSSSEEEEEETTT------EEEEEEGGGT
T ss_pred             EEcccccccccccccccccccchhhheEecCC--------CCCeEEEEEECCCCCEEEEEeCCC------EEEEEECCCC
Confidence            9964                  5566665543        445899999999999999888764      8999999999


Q ss_pred             ccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCC--Cc-----------------------------------
Q psy7108         242 DMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDS--GY-----------------------------------  283 (703)
Q Consensus       242 ~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~--~~-----------------------------------  283 (703)
                      +.+..+..|...|.+++|+|++++++++ .|+ +++|++.+  +.                                   
T Consensus       235 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (372)
T 1k8k_C          235 MAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEG  313 (372)
T ss_dssp             TEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC----
T ss_pred             ceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhccccccccc
Confidence            9999999999999999999999988887 777 99999987  31                                   


Q ss_pred             ----------eecceeeeEEEccch--hhhHhhcCCcceEEEEEEecCchhH
Q psy7108         284 ----------VFDPFLLDISITPQS--VKEALADKDYAKALMMSLKLNEQGL  323 (703)
Q Consensus       284 ----------~~~~~~~~~~~spd~--~~~~l~sg~~~~~l~la~~l~~~~~  323 (703)
                                .+...+.++++.+..  ...++++++.|+.+++ |++...+.
T Consensus       314 ~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~-W~~~~~~~  364 (372)
T 1k8k_C          314 SAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSI-WDVRSLES  364 (372)
T ss_dssp             -----CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEE-EEHHHHHH
T ss_pred             CccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEE-EEecChhH
Confidence                      112234567766432  0147889999999999 99876543

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=99.96  E-value=8.1e-27  Score=250.59  Aligned_cols=245  Identities=11%  Similarity=0.150  Sum_probs=201.2

Q ss_pred             CCccccccccCCCcCeEEEEEcCCCCC-CEEEEEeCCCcEEEEEcCCCceeEEEe--cCCCcEEEEEEec-CCCEEEEEE
Q psy7108          35 ARVLKPEVLSGHEGPVSCIEFSPVLSS-TGMVSASWDKTVKLWNAVETDTQHETI--QLLSDALCVAYKP-DGTEIVVAT  110 (703)
Q Consensus        35 g~~~~~~~l~gH~~~V~~l~~sp~~dg-~~L~sgs~Dg~V~iWd~~~~~~~~~~~--~~~~~V~~v~~sp-dg~~las~s  110 (703)
                      .++.  +.+.+|.+.|++++|+|  ++ ++|++|+.||+|++||+.++.......  .|...|.+++|+| +++.|++++
T Consensus        63 ~~~~--~~~~~h~~~v~~~~~~~--~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~  138 (383)
T 3ei3_B           63 YKLH--RTASPFDRRVTSLEWHP--THPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSS  138 (383)
T ss_dssp             CEEE--EEECCCSSCEEEEEECS--SCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEE
T ss_pred             cceE--EeccCCCCCEEEEEECC--CCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEe
Confidence            4455  77889999999999999  88 999999999999999998876555443  5999999999999 779999999


Q ss_pred             CCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEE
Q psy7108         111 LDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKK  190 (703)
Q Consensus       111 ~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~  190 (703)
                      .|+.|++||+++ .....+..+..                 +...|.+++|+|++++|++++.|+.|++||+ +++.+..
T Consensus       139 ~d~~i~iwd~~~-~~~~~~~~~~~-----------------~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~  199 (383)
T 3ei3_B          139 IRGATTLRDFSG-SVIQVFAKTDS-----------------WDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFK  199 (383)
T ss_dssp             TTTEEEEEETTS-CEEEEEECCCC-----------------SSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEE
T ss_pred             CCCEEEEEECCC-CceEEEeccCC-----------------CCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEE
Confidence            999999999985 55555555432                 2347999999999999999999999999999 4667777


Q ss_pred             EEeccCCccccccccceeeeeccCCC-EEEEEcccCCCCCeeEEECCCCCC----CccceeecCCccceEEEEEcC-CCC
Q psy7108         191 FTITQNKSLDGINDFINRRKMTEFGN-VSLIETRETHEGGNVVLKLPGVKK----GDMAARVLKPEVRVFCVKFSP-TGQ  264 (703)
Q Consensus       191 ~~~~~~~~~~~~~~~v~~~~~spdg~-~l~~~~~~~~~~~~~~i~iwd~~~----~~~~~~~~~h~~~V~~l~~sp-dg~  264 (703)
                      +..+.        ..|.+++|+|+++ .+++++.++      .|++||+++    +...... +|...|.+++|+| +++
T Consensus       200 ~~~h~--------~~v~~~~~~~~~~~~l~s~~~d~------~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~  264 (383)
T 3ei3_B          200 EKLHK--------AKVTHAEFNPRCDWLMATSSVDA------TVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDST  264 (383)
T ss_dssp             EECSS--------SCEEEEEECSSCTTEEEEEETTS------EEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSC
T ss_pred             eccCC--------CcEEEEEECCCCCCEEEEEeCCC------EEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCC
Confidence            66544        4899999999999 677666553      899999998    4444444 6899999999999 999


Q ss_pred             EEEEEeCCC-EEEEEcCCCceeccee-----------------------eeEEEccchhhhHhhcCCcceEEEEEEecCc
Q psy7108         265 AWVAATTEG-VHIYSLDSGYVFDPFL-----------------------LDISITPQSVKEALADKDYAKALMMSLKLNE  320 (703)
Q Consensus       265 ~l~s~s~Dg-v~iwd~~~~~~~~~~~-----------------------~~~~~spd~~~~~l~sg~~~~~l~la~~l~~  320 (703)
                      +|++++.|+ |++||+.++.....+.                       ..++++|++  .+  +++.++.+.+ |++..
T Consensus       265 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg--~~--s~s~d~~i~i-wd~~~  339 (383)
T 3ei3_B          265 KLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDD--QL--LLNDKRTIDI-YDANS  339 (383)
T ss_dssp             EEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCT--TT--CTTCCCCEEE-EETTT
T ss_pred             EEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCc--cc--ccCCCCeEEE-EecCC
Confidence            999999999 9999998876543332                       126778888  44  8889999998 98865


Q ss_pred             hh
Q psy7108         321 QG  322 (703)
Q Consensus       321 ~~  322 (703)
                      ..
T Consensus       340 ~~  341 (383)
T 3ei3_B          340 GG  341 (383)
T ss_dssp             CC
T ss_pred             Cc
Confidence            43

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=99.96  E-value=3.7e-27  Score=256.11  Aligned_cols=259  Identities=11%  Similarity=0.132  Sum_probs=210.5

Q ss_pred             ceeecc-CCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEE
Q psy7108          28 VKKGDM-AARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEI  106 (703)
Q Consensus        28 v~~~d~-tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~l  106 (703)
                      +++||. +++..  ..+.+| ..+....|+|  ++++|++|+.||.|++||+.++........|.+.|.+++|+|++++|
T Consensus        80 v~i~d~~~~~~~--~~~~~~-~~~~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l  154 (420)
T 3vl1_A           80 DFLFNTIIRDGS--KMLKRA-DYTAVDTAKL--QMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEAL  154 (420)
T ss_dssp             EEEEECCSEETT--TTSCSC-CEEEEEEECS--SSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEE
T ss_pred             EEEEEeccccee--eEEecC-CceEEEEEec--CCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEE
Confidence            444552 45555  666666 4555667889  99999999999999999998876555445799999999999999999


Q ss_pred             EEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCc
Q psy7108         107 VVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGI  186 (703)
Q Consensus       107 as~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~  186 (703)
                      ++++.|+.|++||+++++.+..+.+|..                    .|.+++|+|+++.|++++.|+.|++||+++++
T Consensus       155 ~s~s~d~~i~iwd~~~~~~~~~~~~h~~--------------------~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~  214 (420)
T 3vl1_A          155 ISSSQDMQLKIWSVKDGSNPRTLIGHRA--------------------TVTDIAIIDRGRNVLSASLDGTIRLWECGTGT  214 (420)
T ss_dssp             EEEETTSEEEEEETTTCCCCEEEECCSS--------------------CEEEEEEETTTTEEEEEETTSCEEEEETTTTE
T ss_pred             EEEeCCCeEEEEeCCCCcCceEEcCCCC--------------------cEEEEEEcCCCCEEEEEcCCCcEEEeECCCCc
Confidence            9999999999999999998888887765                    89999999999999999999999999999999


Q ss_pred             eEEEEEeccCC----------------ccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeec-C
Q psy7108         187 LLKKFTITQNK----------------SLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL-K  249 (703)
Q Consensus       187 ~~~~~~~~~~~----------------~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~-~  249 (703)
                      .+..+..+...                ....+...+.+++|+|+++.+++++.++      .|++||+++++....+. .
T Consensus       215 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg------~i~i~d~~~~~~~~~~~~~  288 (420)
T 3vl1_A          215 TIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSG------VITVHNVFSKEQTIQLPSK  288 (420)
T ss_dssp             EEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTS------CEEEEETTTCCEEEEECCT
T ss_pred             eeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCC------eEEEEECCCCceeEEcccc
Confidence            98888754321                0111235677788899999999888764      79999999988766665 4


Q ss_pred             CccceEEEEEcCCCC-EEEEEeCCC-EEEEEcCCCce-ecce-------eeeEEEccchhhhHhhcCCcceEEEEEEecC
Q psy7108         250 PEVRVFCVKFSPTGQ-AWVAATTEG-VHIYSLDSGYV-FDPF-------LLDISITPQSVKEALADKDYAKALMMSLKLN  319 (703)
Q Consensus       250 h~~~V~~l~~spdg~-~l~s~s~Dg-v~iwd~~~~~~-~~~~-------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~  319 (703)
                      |...|.+++|+|+++ +|++++.|| |++||+.+++. ...+       ...+ +.+++  ..+++++.++.+++ |++.
T Consensus       289 ~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~-~~~~~--~~l~s~~~d~~v~i-w~~~  364 (420)
T 3vl1_A          289 FTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNV-YFAAG--ALFVSSGFDTSIKL-DIIS  364 (420)
T ss_dssp             TSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEE-EEETT--EEEEEETTTEEEEE-EEEC
T ss_pred             cCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEE-EeCCC--CEEEEecCCccEEE-Eecc
Confidence            788999999999999 999999999 99999988754 2222       2334 45566  68899999999999 9987


Q ss_pred             ch
Q psy7108         320 EQ  321 (703)
Q Consensus       320 ~~  321 (703)
                      .+
T Consensus       365 ~~  366 (420)
T 3vl1_A          365 DP  366 (420)
T ss_dssp             CT
T ss_pred             CC
Confidence            63

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=99.96  E-value=3.7e-28  Score=257.96  Aligned_cols=260  Identities=10%  Similarity=0.126  Sum_probs=209.8

Q ss_pred             ceeecc-CCCccccccccC-----CCcCeEEEEEcCCCC----CCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEE
Q psy7108          28 VKKGDM-AARVLKPEVLSG-----HEGPVSCIEFSPVLS----STGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCV   97 (703)
Q Consensus        28 v~~~d~-tg~~~~~~~l~g-----H~~~V~~l~~sp~~d----g~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v   97 (703)
                      +++|+. +++.+  ..+..     |.+.|++++|+|  +    +.+|++|+.||.|++||+.+++....+..|...|.++
T Consensus        46 v~vw~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~  121 (366)
T 3k26_A           46 VTLYECHSQGEI--RLLQSYVDADADENFYTCAWTY--DSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINEL  121 (366)
T ss_dssp             EEEEEECGGGCE--EEEEEEECSCTTCCEEEEEEEE--CTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEE
T ss_pred             EEEEEcCCCcEE--EeeeeccccCCCCcEEEEEecc--CCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEE
Confidence            556663 45555  55543     568899999999  7    6799999999999999999988777777899999999


Q ss_pred             EEec-CCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCc
Q psy7108          98 AYKP-DGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKY  176 (703)
Q Consensus        98 ~~sp-dg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~  176 (703)
                      +|+| +++.|++++.||.|++||+++++.+..+....                 .|...|.+++|+|++++|++++.|+.
T Consensus       122 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-----------------~~~~~v~~~~~~~~~~~l~~~~~dg~  184 (366)
T 3k26_A          122 KFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVE-----------------GHRDEVLSADYDLLGEKIMSCGMDHS  184 (366)
T ss_dssp             EECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTT-----------------SCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred             EECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccc-----------------cccCceeEEEECCCCCEEEEecCCCC
Confidence            9999 89999999999999999999999888773211                 12348999999999999999999999


Q ss_pred             EEEEECCCCceEEEEEec--------------------cCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECC
Q psy7108         177 ICIYSSREGILLKKFTIT--------------------QNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLP  236 (703)
Q Consensus       177 I~lwD~~~~~~~~~~~~~--------------------~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iw  236 (703)
                      |++||+++++....+...                    ......++...|.+++|+  ++.+++++.++      .|++|
T Consensus       185 i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~------~i~~w  256 (366)
T 3k26_A          185 LKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCEN------AIVCW  256 (366)
T ss_dssp             EEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSS------EEEEE
T ss_pred             EEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCC------EEEEE
Confidence            999999987554322210                    001122366789999998  67888777654      89999


Q ss_pred             CCCCCcc--------------ceeecCCccceEEEEEcCC--CCEEEEEeCCC-EEEEEcCCCceec------------c
Q psy7108         237 GVKKGDM--------------AARVLKPEVRVFCVKFSPT--GQAWVAATTEG-VHIYSLDSGYVFD------------P  287 (703)
Q Consensus       237 d~~~~~~--------------~~~~~~h~~~V~~l~~spd--g~~l~s~s~Dg-v~iwd~~~~~~~~------------~  287 (703)
                      |+.+++.              ...+..|...|++++|+|+  +++|++++.|| |++|++.+++...            .
T Consensus       257 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~  336 (366)
T 3k26_A          257 KPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGA  336 (366)
T ss_dssp             EESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCS
T ss_pred             eCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCC
Confidence            9987754              5666778889999999999  99999999999 9999999875321            2


Q ss_pred             eeeeEEEccchhhhHhhcCCcceEEEEEEecC
Q psy7108         288 FLLDISITPQSVKEALADKDYAKALMMSLKLN  319 (703)
Q Consensus       288 ~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~  319 (703)
                      ...+++|+|++  .++++++.++.+.+ |++.
T Consensus       337 ~v~~~~~s~~~--~~l~s~~~dg~i~i-wd~~  365 (366)
T 3k26_A          337 AIRQTSFSRDS--SILIAVCDDASIWR-WDRL  365 (366)
T ss_dssp             CEEEEEECTTS--SEEEEEETTSEEEE-EEC-
T ss_pred             ceEEEEeCCCC--CeEEEEeCCCEEEE-EEec
Confidence            34679999999  88999999999998 8864

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=99.96  E-value=4.2e-27  Score=254.97  Aligned_cols=253  Identities=15%  Similarity=0.232  Sum_probs=209.2

Q ss_pred             CCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcE
Q psy7108          46 HEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQ  125 (703)
Q Consensus        46 H~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~  125 (703)
                      |.+.|++++|+|  ++++|++|+.||.|++|| .++.....+..|...|.+++|+|+++.|++++.|+.|++||+++++.
T Consensus       107 ~~~~v~~~~~s~--~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~  183 (425)
T 1r5m_A          107 TTNQVTCLAWSH--DGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTV  183 (425)
T ss_dssp             -CBCEEEEEECT--TSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEE
T ss_pred             CCCceEEEEEcC--CCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcE
Confidence            788999999999  999999999999999999 56667777778999999999999999999999999999999999998


Q ss_pred             EEEEeccccCC---------------CC-C--------------------CCCccchhhcccCCccEEEEEEcCCCCEEE
Q psy7108         126 VGSVEARRDLD---------------SG-R--------------------LDTDLVTREQSLKAKAVSTVCYSADGSCIL  169 (703)
Q Consensus       126 ~~~~~~~~~~~---------------~~-~--------------------~~~~~~~~~~~~~~~~V~~i~~spdg~~l~  169 (703)
                      +..+..+....               .. .                    ............|...|.+++|+|++++|+
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~  263 (425)
T 1r5m_A          184 MQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLL  263 (425)
T ss_dssp             EEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEE
T ss_pred             EEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEE
Confidence            88777654320               00 0                    000011112335788999999999999999


Q ss_pred             EEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC
Q psy7108         170 AAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK  249 (703)
Q Consensus       170 s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~  249 (703)
                      +++.|+.|++||+++++.+..+..+.        ..+.+++|+|++ .+++++.++      .|++||+++++....+..
T Consensus       264 ~~~~d~~i~i~d~~~~~~~~~~~~~~--------~~i~~~~~~~~~-~l~~~~~d~------~i~i~d~~~~~~~~~~~~  328 (425)
T 1r5m_A          264 SASDDGTLRIWHGGNGNSQNCFYGHS--------QSIVSASWVGDD-KVISCSMDG------SVRLWSLKQNTLLALSIV  328 (425)
T ss_dssp             EEETTSCEEEECSSSBSCSEEECCCS--------SCEEEEEEETTT-EEEEEETTS------EEEEEETTTTEEEEEEEC
T ss_pred             EEcCCCEEEEEECCCCccceEecCCC--------ccEEEEEECCCC-EEEEEeCCC------cEEEEECCCCcEeEeccc
Confidence            99999999999999988877775443        489999999999 777666553      899999999999988999


Q ss_pred             CccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCc--------------------eecc--------eeeeEEEccchhh
Q psy7108         250 PEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGY--------------------VFDP--------FLLDISITPQSVK  300 (703)
Q Consensus       250 h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~--------------------~~~~--------~~~~~~~spd~~~  300 (703)
                      |...|.+++|+|++++|++++.|| |++|++.++.                    ....        ...+++|+|++  
T Consensus       329 ~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~--  406 (425)
T 1r5m_A          329 DGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAG--  406 (425)
T ss_dssp             TTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTS--
T ss_pred             CCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCC--
Confidence            999999999999999999999999 9999998776                    3221        45679999999  


Q ss_pred             hHhhcCCcceEEEEEEecC
Q psy7108         301 EALADKDYAKALMMSLKLN  319 (703)
Q Consensus       301 ~~l~sg~~~~~l~la~~l~  319 (703)
                      ..+++++.++.+.+ |++.
T Consensus       407 ~~l~~~~~dg~i~i-w~~~  424 (425)
T 1r5m_A          407 NKISVAYSLQEGSV-VAIP  424 (425)
T ss_dssp             SEEEEEESSSCCEE-EECC
T ss_pred             ceEEEEecCceEEE-Eeec
Confidence            78889999999988 8764

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=99.95  E-value=1.4e-26  Score=242.69  Aligned_cols=239  Identities=12%  Similarity=0.185  Sum_probs=202.8

Q ss_pred             cccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCcee---EEEe--cCCCcEEEEEEecCCCEEEEEECCCeEE
Q psy7108          42 VLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQ---HETI--QLLSDALCVAYKPDGTEIVVATLDGQLI  116 (703)
Q Consensus        42 ~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~---~~~~--~~~~~V~~v~~spdg~~las~s~dg~I~  116 (703)
                      ...+|.++|++++|+|  ++++|++++ ||.|++||+.+++..   ....  .|...|.+++|+|+++.|++++.|+.|+
T Consensus        46 ~~~~h~~~v~~~~~~~--~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~  122 (337)
T 1gxr_A           46 NTLNHGEVVCAVTISN--PTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLS  122 (337)
T ss_dssp             EEECCSSCCCEEEECS--SSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEE
T ss_pred             eeccCCCceEEEEEec--CCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEE
Confidence            3458999999999999  999999999 999999999876532   2222  6889999999999999999999999999


Q ss_pred             EEEcCCCc--EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEec
Q psy7108         117 MFDVESAA--QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTIT  194 (703)
Q Consensus       117 vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~  194 (703)
                      +||+++++  ....+..+..                    .+.+++|+|+++++++++.|+.|++||+++++.+..+..+
T Consensus       123 ~~d~~~~~~~~~~~~~~~~~--------------------~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~  182 (337)
T 1gxr_A          123 IWDLAAPTPRIKAELTSSAP--------------------ACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGH  182 (337)
T ss_dssp             EEECCCC--EEEEEEECSSS--------------------CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred             EEECCCCCcceeeecccCCC--------------------ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecc
Confidence            99999887  4455555543                    7999999999999999999999999999999888877644


Q ss_pred             cCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-
Q psy7108         195 QNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-  273 (703)
Q Consensus       195 ~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-  273 (703)
                      .        ..+.+++|+|+++.+++++.++      .+++||+++++..... .+...+.+++|+|+++++++++.++ 
T Consensus       183 ~--------~~i~~~~~~~~~~~l~~~~~dg------~i~~~d~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~~  247 (337)
T 1gxr_A          183 T--------DGASCIDISNDGTKLWTGGLDN------TVRSWDLREGRQLQQH-DFTSQIFSLGYCPTGEWLAVGMESSN  247 (337)
T ss_dssp             S--------SCEEEEEECTTSSEEEEEETTS------EEEEEETTTTEEEEEE-ECSSCEEEEEECTTSSEEEEEETTSC
T ss_pred             c--------CceEEEEECCCCCEEEEEecCC------cEEEEECCCCceEeee-cCCCceEEEEECCCCCEEEEEcCCCc
Confidence            3        4899999999999999887664      8999999998876655 4677899999999999999999999 


Q ss_pred             EEEEEcCCCceec-----ceeeeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108         274 VHIYSLDSGYVFD-----PFLLDISITPQSVKEALADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       274 v~iwd~~~~~~~~-----~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~  321 (703)
                      +++|++.+++...     .....++|+|++  ..+++++.++.+.+ |++...
T Consensus       248 i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~dg~i~~-~~~~~~  297 (337)
T 1gxr_A          248 VEVLHVNKPDKYQLHLHESCVLSLKFAYCG--KWFVSTGKDNLLNA-WRTPYG  297 (337)
T ss_dssp             EEEEETTSSCEEEECCCSSCEEEEEECTTS--SEEEEEETTSEEEE-EETTTC
T ss_pred             EEEEECCCCCeEEEcCCccceeEEEECCCC--CEEEEecCCCcEEE-EECCCC
Confidence            9999998876532     224679999999  78899999999998 988654

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=99.95  E-value=5.8e-27  Score=248.03  Aligned_cols=258  Identities=12%  Similarity=0.186  Sum_probs=206.6

Q ss_pred             ceeecc-CCCccccccccCCCcCeEEEEEcCCCC---CCEEEEEeCCCcEEEEEcCCCc-eeEEEecCCCcEEEEEE---
Q psy7108          28 VKKGDM-AARVLKPEVLSGHEGPVSCIEFSPVLS---STGMVSASWDKTVKLWNAVETD-TQHETIQLLSDALCVAY---   99 (703)
Q Consensus        28 v~~~d~-tg~~~~~~~l~gH~~~V~~l~~sp~~d---g~~L~sgs~Dg~V~iWd~~~~~-~~~~~~~~~~~V~~v~~---   99 (703)
                      +++|+. +++.. .....+|.++|++++|+|  +   +.+|++|+.||.|++||+.+++ ....+..|...|.+++|   
T Consensus        46 v~iw~~~~~~~~-~~~~~~~~~~v~~~~~~~--~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~  122 (357)
T 3i2n_A           46 IQLYEIQHGDLK-LLREIEKAKPIKCGTFGA--TSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGG  122 (357)
T ss_dssp             EEEEEECSSSEE-EEEEEEESSCEEEEECTT--CCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESG
T ss_pred             EEEEeCCCCccc-ceeeecccCcEEEEEEcC--CCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccc
Confidence            556663 44443 122347999999999999  7   6999999999999999999887 66777789999999954   


Q ss_pred             ---ecCCCEEEEEECCCeEEEEEcCCCc-EEEEEeccccCCCCCCCCccchhhcccCCccEEEEE----EcCCCCEEEEE
Q psy7108         100 ---KPDGTEIVVATLDGQLIMFDVESAA-QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVC----YSADGSCILAA  171 (703)
Q Consensus       100 ---spdg~~las~s~dg~I~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~----~spdg~~l~s~  171 (703)
                         +|+++.|++++.|+.|++||+++++ .+..+..+...                +...+.+++    |+|++++++++
T Consensus       123 ~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~----------------~~~~v~~~~~~~~~~~~~~~l~~~  186 (357)
T 3i2n_A          123 LGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGE----------------NKRDCWTVAFGNAYNQEERVVCAG  186 (357)
T ss_dssp             GGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTS----------------CCCCEEEEEEECCCC-CCCEEEEE
T ss_pred             cccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCC----------------CCCceEEEEEEeccCCCCCEEEEE
Confidence               6899999999999999999999886 56666554321                123688888    78999999999


Q ss_pred             ecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeecc---CCCEEEEEcccCCCCCeeEEECCCCCCCccceeec
Q psy7108         172 GQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTE---FGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL  248 (703)
Q Consensus       172 s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp---dg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~  248 (703)
                      +.|+.|++||+++++......         +...+.+++|+|   ++..+++++.++      .|++||+++++....+.
T Consensus       187 ~~d~~i~i~d~~~~~~~~~~~---------~~~~v~~~~~~~~~~~~~~l~~~~~dg------~i~i~d~~~~~~~~~~~  251 (357)
T 3i2n_A          187 YDNGDIKLFDLRNMALRWETN---------IKNGVCSLEFDRKDISMNKLVATSLEG------KFHVFDMRTQHPTKGFA  251 (357)
T ss_dssp             ETTSEEEEEETTTTEEEEEEE---------CSSCEEEEEESCSSSSCCEEEEEESTT------EEEEEEEEEEETTTEEE
T ss_pred             ccCCeEEEEECccCceeeecC---------CCCceEEEEcCCCCCCCCEEEEECCCC------eEEEEeCcCCCccccee
Confidence            999999999999988754422         334899999999   899998887664      89999999887766655


Q ss_pred             -----CCccceEEEEEcCCCC-EEEEEeCCC-EEEEEcCCCcee-------------------------cceeeeEEEcc
Q psy7108         249 -----KPEVRVFCVKFSPTGQ-AWVAATTEG-VHIYSLDSGYVF-------------------------DPFLLDISITP  296 (703)
Q Consensus       249 -----~h~~~V~~l~~spdg~-~l~s~s~Dg-v~iwd~~~~~~~-------------------------~~~~~~~~~sp  296 (703)
                           .|...|.+++|+|+++ ++++++.|| |++|++.++...                         .....+++|+|
T Consensus       252 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~  331 (357)
T 3i2n_A          252 SVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSP  331 (357)
T ss_dssp             EEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECS
T ss_pred             eeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcC
Confidence                 8999999999999998 799999999 999998764321                         12236799999


Q ss_pred             chhhhHhh-cCCcceEEEEEEecCchh
Q psy7108         297 QSVKEALA-DKDYAKALMMSLKLNEQG  322 (703)
Q Consensus       297 d~~~~~l~-sg~~~~~l~la~~l~~~~  322 (703)
                      ++  ..++ +++.++.+++ |++....
T Consensus       332 ~~--~~l~~s~~~d~~i~i-w~~~~~~  355 (357)
T 3i2n_A          332 DK--RGLCVCSSFDQTVRV-LIVTKLN  355 (357)
T ss_dssp             SS--TTEEEEEETTSEEEE-EEECC--
T ss_pred             CC--CeEEEEecCCCcEEE-EECCCcc
Confidence            99  7787 8999999999 9987654

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=99.95  E-value=1.1e-26  Score=252.50  Aligned_cols=273  Identities=13%  Similarity=0.163  Sum_probs=208.6

Q ss_pred             ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEE
Q psy7108          28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEI  106 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~l  106 (703)
                      +++|| .++++.  ..+.+|.+.|++++|+|  ++++|++|+.|++|++||+.+++....+..|...|.+++|+|+++.|
T Consensus       121 i~iwd~~~~~~~--~~~~~h~~~v~~~~~~~--~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l  196 (420)
T 3vl1_A          121 IKVLDSNFNLQR--EIDQAHVSEITKLKFFP--SGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNV  196 (420)
T ss_dssp             EEEECTTSCEEE--EETTSSSSCEEEEEECT--TSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEE
T ss_pred             EEEEeCCCccee--eecccccCccEEEEECC--CCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEE
Confidence            66677 356666  77889999999999999  99999999999999999999988888888899999999999999999


Q ss_pred             EEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCC----ccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEEC
Q psy7108         107 VVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDT----DLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSS  182 (703)
Q Consensus       107 as~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~  182 (703)
                      ++++.|+.|++||+++++.+..+..+..........    .........+...+.+++|+|++++|++++.|+.|++||+
T Consensus       197 ~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~  276 (420)
T 3vl1_A          197 LSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNV  276 (420)
T ss_dssp             EEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEET
T ss_pred             EEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEEC
Confidence            999999999999999999998887654311100000    0000011223456777788999999999999999999999


Q ss_pred             CCCceEEEEEeccCCccccccccceeeeeccCCC-EEEEEcccCCCCCeeEEECCCCCCCcc-ceeecC-CccceEEEEE
Q psy7108         183 REGILLKKFTITQNKSLDGINDFINRRKMTEFGN-VSLIETRETHEGGNVVLKLPGVKKGDM-AARVLK-PEVRVFCVKF  259 (703)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~-~l~~~~~~~~~~~~~~i~iwd~~~~~~-~~~~~~-h~~~V~~l~~  259 (703)
                      ++++....+..       ++...+.+++|+|+++ ++++++.++      .|++||+++++. +..+.. |...|.++.+
T Consensus       277 ~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~l~~g~~dg------~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~  343 (420)
T 3vl1_A          277 FSKEQTIQLPS-------KFTCSCNSLTVDGNNANYIYAGYENG------MLAQWDLRSPECPVGEFLINEGTPINNVYF  343 (420)
T ss_dssp             TTCCEEEEECC-------TTSSCEEEEEECSSCTTEEEEEETTS------EEEEEETTCTTSCSEEEEESTTSCEEEEEE
T ss_pred             CCCceeEEccc-------ccCCCceeEEEeCCCCCEEEEEeCCC------eEEEEEcCCCcCchhhhhccCCCCceEEEe
Confidence            99887776642       2445899999999999 777777654      899999998754 556665 6677888854


Q ss_pred             cCCCCEEEEEeCCC-EEEEEcCCCcee---------------cceeeeEEEccchhh--hHhhcCCcceEEEEEEecCc
Q psy7108         260 SPTGQAWVAATTEG-VHIYSLDSGYVF---------------DPFLLDISITPQSVK--EALADKDYAKALMMSLKLNE  320 (703)
Q Consensus       260 spdg~~l~s~s~Dg-v~iwd~~~~~~~---------------~~~~~~~~~spd~~~--~~l~sg~~~~~l~la~~l~~  320 (703)
                       |++++|++++.|+ |++|++......               .....+++|+|++..  .+++.|+ ++.+.+ |++.+
T Consensus       344 -~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~-~g~~~~-~~~~~  419 (420)
T 3vl1_A          344 -AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGK-NNFCAL-YNLSN  419 (420)
T ss_dssp             -ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEET-TTEEEE-EESCC
T ss_pred             -CCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcC-CceEEE-EeccC
Confidence             5788999999999 999998764221               112356899999820  1455554 455555 77654

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=99.95  E-value=7.7e-27  Score=248.78  Aligned_cols=246  Identities=13%  Similarity=0.105  Sum_probs=205.1

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc--eeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEE
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD--TQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMF  118 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~--~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vw  118 (703)
                      ..+..|.++|++++|+|  ++++|++|+.|+.|++||+.+++  ....+..|...|.+++|+|++++|++++.|+.|++|
T Consensus         2 ~~~~~~~~~i~~~~~s~--~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vw   79 (372)
T 1k8k_C            2 AYHSFLVEPISCHAWNK--DRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVW   79 (372)
T ss_dssp             CEEESCSSCCCEEEECT--TSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred             ceecccCCCeEEEEECC--CCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEE
Confidence            45677999999999999  99999999999999999998876  666677899999999999999999999999999999


Q ss_pred             EcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCc
Q psy7108         119 DVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKS  198 (703)
Q Consensus       119 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~  198 (703)
                      |+++++........                  .|...|.+++|+|++++|++++.|+.|++||++.+.........    
T Consensus        80 d~~~~~~~~~~~~~------------------~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~----  137 (372)
T 1k8k_C           80 TLKGRTWKPTLVIL------------------RINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHI----  137 (372)
T ss_dssp             EEETTEEEEEEECC------------------CCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEE----
T ss_pred             ECCCCeeeeeEEee------------------cCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeee----
Confidence            99888765544321                  12348999999999999999999999999999987642222111    


Q ss_pred             cccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC------------------CCccceeecCCccceEEEEEc
Q psy7108         199 LDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK------------------KGDMAARVLKPEVRVFCVKFS  260 (703)
Q Consensus       199 ~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~------------------~~~~~~~~~~h~~~V~~l~~s  260 (703)
                      ..++...+.+++|+|+++.+++++.++      .+++||++                  .++....+..|...|.+++|+
T Consensus       138 ~~~~~~~i~~~~~~~~~~~l~~~~~dg------~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  211 (372)
T 1k8k_C          138 KKPIRSTVLSLDWHPNSVLLAAGSCDF------KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFS  211 (372)
T ss_dssp             CTTCCSCEEEEEECTTSSEEEEEETTS------CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEEC
T ss_pred             ecccCCCeeEEEEcCCCCEEEEEcCCC------CEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEEC
Confidence            123456899999999999999887664      79999953                  567777788899999999999


Q ss_pred             CCCCEEEEEeCCC-EEEEEcCCCceecce------eeeEEEccchhhhHhhcCCcceEEEEEEecCc
Q psy7108         261 PTGQAWVAATTEG-VHIYSLDSGYVFDPF------LLDISITPQSVKEALADKDYAKALMMSLKLNE  320 (703)
Q Consensus       261 pdg~~l~s~s~Dg-v~iwd~~~~~~~~~~------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~  320 (703)
                      |++++|++++.|+ |++||+.+++....+      ...++|+|++  .+++++ .++.+.+ |++..
T Consensus       212 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~-~d~~i~i-~~~~~  274 (372)
T 1k8k_C          212 ANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITES--SLVAAG-HDCFPVL-FTYDS  274 (372)
T ss_dssp             SSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETT--EEEEEE-TTSSCEE-EEEET
T ss_pred             CCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCC--CEEEEE-eCCeEEE-EEccC
Confidence            9999999999999 999999988775444      3678999999  677777 7888887 88765

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=99.95  E-value=2e-28  Score=262.36  Aligned_cols=239  Identities=15%  Similarity=0.121  Sum_probs=189.3

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCC--ceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEE
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVET--DTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMF  118 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~--~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vw  118 (703)
                      ..+..|.++|++++|+|  ++++|++|+.|+.|++||+.++  .....+..|...|.+++|+|++++|++++.|+.|++|
T Consensus         5 ~~~~~~~~~v~~~~~s~--~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vw   82 (377)
T 3dwl_C            5 QVLHILPKPSYEHAFNS--QRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVY   82 (377)
T ss_dssp             EEEEECSSCCSCCEECS--SSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC
T ss_pred             eeEecCCCcEEEEEECC--CCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEE
Confidence            44556788999999999  9999999999999999999877  4555666799999999999999999999999999999


Q ss_pred             EcCCCc---EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCce---EEEEE
Q psy7108         119 DVESAA---QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGIL---LKKFT  192 (703)
Q Consensus       119 d~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~---~~~~~  192 (703)
                      |+++++   ....+..|.                    ..|.+++|+|+++.|++++.|+.|++||+++++.   ...+.
T Consensus        83 d~~~~~~~~~~~~~~~~~--------------------~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~  142 (377)
T 3dwl_C           83 EKRPDGTWKQTLVLLRLN--------------------RAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLK  142 (377)
T ss_dssp             ------CCCCEEECCCCS--------------------SCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEEC
T ss_pred             EcCCCCceeeeeEecccC--------------------CceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEee
Confidence            999876   444454544                    4899999999999999999999999999998763   45544


Q ss_pred             eccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC------------------CCccceeecCCccce
Q psy7108         193 ITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK------------------KGDMAARVLKPEVRV  254 (703)
Q Consensus       193 ~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~------------------~~~~~~~~~~h~~~V  254 (703)
                      .       .|...|.+++|+|+++.+++++.++      .|++||+.                  .+++...+ .|...|
T Consensus       143 ~-------~h~~~v~~~~~~~~~~~l~~~~~d~------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v  208 (377)
T 3dwl_C          143 R-------PLRSTILSLDWHPNNVLLAAGCADR------KAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWV  208 (377)
T ss_dssp             S-------SCCSCEEEEEECTTSSEEEEEESSS------CEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSE
T ss_pred             c-------ccCCCeEEEEEcCCCCEEEEEeCCC------EEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceE
Confidence            3       1455899999999999999888764      79999985                  24455555 899999


Q ss_pred             EEEEEcCCCCEEEEEeCCC-EEEEEcCCCce----ecce------eeeEEEccchhhhHhhcCCcceEEEEEEecC
Q psy7108         255 FCVKFSPTGQAWVAATTEG-VHIYSLDSGYV----FDPF------LLDISITPQSVKEALADKDYAKALMMSLKLN  319 (703)
Q Consensus       255 ~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~----~~~~------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~  319 (703)
                      .+++|+|++++|++++.|+ |++||+.+++.    ...+      ..+++|+|++  .++++++.++.+.  |...
T Consensus       209 ~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~--~~l~~~~~~~~~~--~~~~  280 (377)
T 3dwl_C          209 HAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANES--AIVAAGYNYSPIL--LQGN  280 (377)
T ss_dssp             EEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETT--EEEEEESSSSEEE--ECCC
T ss_pred             EEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCC--CEEEEEcCCcEEE--EEeC
Confidence            9999999999999999999 99999998876    3333      3679999999  7888888777664  4443

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=99.95  E-value=1.7e-26  Score=250.28  Aligned_cols=245  Identities=13%  Similarity=0.233  Sum_probs=205.4

Q ss_pred             cCCCcCeEEEEEcCCCCCC-EEEEEeCCCcEEEEEc----CCCc------eeEEEec----------CCCcEEEEEEecC
Q psy7108          44 SGHEGPVSCIEFSPVLSST-GMVSASWDKTVKLWNA----VETD------TQHETIQ----------LLSDALCVAYKPD  102 (703)
Q Consensus        44 ~gH~~~V~~l~~sp~~dg~-~L~sgs~Dg~V~iWd~----~~~~------~~~~~~~----------~~~~V~~v~~spd  102 (703)
                      ..|.++|++++|+|  +++ +|++|+.||.|++|++    .+++      ....+..          |.+.|.+++|+|+
T Consensus        42 ~~~~~~v~~~~~s~--~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  119 (425)
T 1r5m_A           42 IVKLDNIVSSTWNP--LDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHD  119 (425)
T ss_dssp             EEECSCCSEEEECS--SCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTT
T ss_pred             eeccCceEEEEECC--CCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCC
Confidence            34669999999999  999 9999999999999999    8776      3333333          5669999999999


Q ss_pred             CCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEEC
Q psy7108         103 GTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSS  182 (703)
Q Consensus       103 g~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~  182 (703)
                      +++|++++.||.|++|| .+++.+..+..|..                    .|.+++|+|++++|++++.|+.|++||+
T Consensus       120 ~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~--------------------~v~~~~~~~~~~~l~~~~~d~~i~iwd~  178 (425)
T 1r5m_A          120 GNSIVTGVENGELRLWN-KTGALLNVLNFHRA--------------------PIVSVKWNKDGTHIISMDVENVTILWNV  178 (425)
T ss_dssp             SSEEEEEETTSCEEEEE-TTSCEEEEECCCCS--------------------CEEEEEECTTSSEEEEEETTCCEEEEET
T ss_pred             CCEEEEEeCCCeEEEEe-CCCCeeeeccCCCc--------------------cEEEEEECCCCCEEEEEecCCeEEEEEC
Confidence            99999999999999999 67778888877654                    8999999999999999999999999999


Q ss_pred             CCCceEEEEEeccCC------------------------------------------------ccccccccceeeeeccC
Q psy7108         183 REGILLKKFTITQNK------------------------------------------------SLDGINDFINRRKMTEF  214 (703)
Q Consensus       183 ~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~v~~~~~spd  214 (703)
                      ++++.+..+..+...                                                .+.++...+.+++|+|+
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~  258 (425)
T 1r5m_A          179 ISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDT  258 (425)
T ss_dssp             TTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETT
T ss_pred             CCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCC
Confidence            998887766543321                                                22356678999999999


Q ss_pred             CCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecce-----
Q psy7108         215 GNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPF-----  288 (703)
Q Consensus       215 g~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~-----  288 (703)
                      ++.+++++.++      .|++||+++++....+..|...|.+++|+|++ .+++++.|+ |++||+.+++....+     
T Consensus       259 ~~~l~~~~~d~------~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~  331 (425)
T 1r5m_A          259 NKLLLSASDDG------TLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGV  331 (425)
T ss_dssp             TTEEEEEETTS------CEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTC
T ss_pred             CCEEEEEcCCC------EEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCc
Confidence            99988887664      79999999999998998999999999999999 999999999 999999988775444     


Q ss_pred             -eeeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108         289 -LLDISITPQSVKEALADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       289 -~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~  321 (703)
                       ...++|+|++  ..+++++.++.+.+ |++...
T Consensus       332 ~i~~~~~s~~~--~~l~~~~~dg~i~i-~~~~~~  362 (425)
T 1r5m_A          332 PIFAGRISQDG--QKYAVAFMDGQVNV-YDLKKL  362 (425)
T ss_dssp             CEEEEEECTTS--SEEEEEETTSCEEE-EECHHH
T ss_pred             cEEEEEEcCCC--CEEEEEECCCeEEE-EECCCC
Confidence             3578999999  78999999999998 887644

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=99.95  E-value=2.4e-26  Score=246.88  Aligned_cols=247  Identities=9%  Similarity=0.128  Sum_probs=198.1

Q ss_pred             ceeecc-CCCccccccc--cCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecC---CCcEEEEEEec
Q psy7108          28 VKKGDM-AARVLKPEVL--SGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQL---LSDALCVAYKP  101 (703)
Q Consensus        28 v~~~d~-tg~~~~~~~l--~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~---~~~V~~v~~sp  101 (703)
                      +++||. +++..  ..+  .+|.+.|.+++|+|. ++++|++++.|+.|++||+.+ ........+   ...|.+++|+|
T Consensus        98 i~iwd~~~~~~~--~~~~~~~h~~~v~~~~~~~~-~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~  173 (383)
T 3ei3_B           98 IILWDYDVQNKT--SFIQGMGPGDAITGMKFNQF-NTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSV  173 (383)
T ss_dssp             EEEEETTSTTCE--EEECCCSTTCBEEEEEEETT-EEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEET
T ss_pred             EEEEeCCCcccc--eeeecCCcCCceeEEEeCCC-CCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECC
Confidence            677774 44554  444  479999999999993 468999999999999999986 355555443   47899999999


Q ss_pred             CCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCC-EEEEEecCCcEEEE
Q psy7108         102 DGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGS-CILAAGQSKYICIY  180 (703)
Q Consensus       102 dg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~-~l~s~s~dg~I~lw  180 (703)
                      +++.|++++.|+.|++||+ +++.+..+.+|..                    .|.+++|+|+++ ++++++.|+.|++|
T Consensus       174 ~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~--------------------~v~~~~~~~~~~~~l~s~~~d~~i~iw  232 (383)
T 3ei3_B          174 SRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKA--------------------KVTHAEFNPRCDWLMATSSVDATVKLW  232 (383)
T ss_dssp             TTTEEEEEETTSEEEEEET-TSCEEEEEECSSS--------------------CEEEEEECSSCTTEEEEEETTSEEEEE
T ss_pred             CCCEEEEECCCCCEEEEEC-CCCEEEEeccCCC--------------------cEEEEEECCCCCCEEEEEeCCCEEEEE
Confidence            9999999999999999999 5777788877655                    899999999999 99999999999999


Q ss_pred             ECCC----CceEEEEEeccCCccccccccceeeeecc-CCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCc----
Q psy7108         181 SSRE----GILLKKFTITQNKSLDGINDFINRRKMTE-FGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPE----  251 (703)
Q Consensus       181 D~~~----~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-dg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~----  251 (703)
                      |+++    +.++..+.         +...|.+++|+| +++.+++++.++      .|++||+++++....+..|.    
T Consensus       233 d~~~~~~~~~~~~~~~---------~~~~v~~~~~s~~~~~~l~~~~~d~------~i~iwd~~~~~~~~~~~~~~~~~~  297 (383)
T 3ei3_B          233 DLRNIKDKNSYIAEMP---------HEKPVNAAYFNPTDSTKLLTTDQRN------EIRVYSSYDWSKPDQIIIHPHRQF  297 (383)
T ss_dssp             EGGGCCSTTCEEEEEE---------CSSCEEEEEECTTTSCEEEEEESSS------EEEEEETTBTTSCSEEEECCBCCC
T ss_pred             eCCCCCcccceEEEec---------CCCceEEEEEcCCCCCEEEEEcCCC------cEEEEECCCCcccccccccccccc
Confidence            9998    55665552         334899999999 999999887764      89999999987766655432    


Q ss_pred             -------------cceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceeccee--------eeEEEccchhhhHhhcCCcc
Q psy7108         252 -------------VRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPFL--------LDISITPQSVKEALADKDYA  309 (703)
Q Consensus       252 -------------~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~~--------~~~~~spd~~~~~l~sg~~~  309 (703)
                                   ..+..++|+|++++  +++.|+ |++||+.+++....+.        ..++|+|++  .++++++ +
T Consensus       298 ~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g--~~l~s~s-d  372 (383)
T 3ei3_B          298 QHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTG--DVLASGM-G  372 (383)
T ss_dssp             TTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTS--SEEEEEE-T
T ss_pred             ccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCc--cEEEEec-C
Confidence                         33445666777766  777889 9999999988755443        335999999  7888886 8


Q ss_pred             eEEEEEEecCc
Q psy7108         310 KALMMSLKLNE  320 (703)
Q Consensus       310 ~~l~la~~l~~  320 (703)
                      +.+++ |++++
T Consensus       373 ~~i~i-w~~~~  382 (383)
T 3ei3_B          373 FNILI-WNRED  382 (383)
T ss_dssp             TEEEE-EECC-
T ss_pred             CcEEE-EecCC
Confidence            99998 98864

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.95  E-value=1.5e-27  Score=266.47  Aligned_cols=244  Identities=10%  Similarity=0.075  Sum_probs=189.2

Q ss_pred             cccCCceEEecCCceeeccCCCcc--ccccccCCCcCeEEEEEcCCCC------CCEEEEEeCCCcEEEEEcCCCce---
Q psy7108          15 THEGGNVVLKLPGVKKGDMAARVL--KPEVLSGHEGPVSCIEFSPVLS------STGMVSASWDKTVKLWNAVETDT---   83 (703)
Q Consensus        15 ~~~~~~~~i~~~~v~~~d~tg~~~--~~~~l~gH~~~V~~l~~sp~~d------g~~L~sgs~Dg~V~iWd~~~~~~---   83 (703)
                      +..+.+..+++|++.    ++++.  ...++.+|.+.|.+++|+|  +      +.+||+|+.||+|++||+.++..   
T Consensus       177 aS~s~D~tI~iWd~~----~~~~~~~~~~~l~~~~~~V~~v~wsp--~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~  250 (524)
T 2j04_B          177 DKEKHSSCIQIFKMN----TSTLHCVKVQTIVHSFGEVWDLKWHE--GCHAPHLVGCLSFVSQEGTINFLEIIDNATDVH  250 (524)
T ss_dssp             -----CEEEEEEEEE----TTTCCEEEEEEEEECCCSEEEEEECS--SCCCSSSSCEEEEEETTSCEEEEECCCCSSSSS
T ss_pred             ccCCCCceEEEEEcc----CCCCCceEEEEEEecCCcEEEEEECC--CCCCCCCCceEEEEecCCeEEEEEcCCCccccc
Confidence            445566777777654    33321  0034678899999999999  5      57999999999999999976532   


Q ss_pred             --------eEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCc-EEEEEeccccCCCCCCCCccchhhcccCCc
Q psy7108          84 --------QHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAA-QVGSVEARRDLDSGRLDTDLVTREQSLKAK  154 (703)
Q Consensus        84 --------~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (703)
                              ...+..|...|.+++|+|++ .|++|+.||+|++||+++++ ....+.+|..                    
T Consensus       251 ~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~--------------------  309 (524)
T 2j04_B          251 VFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDS--------------------  309 (524)
T ss_dssp             EEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEECSSS--------------------
T ss_pred             cceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEeecccc--------------------
Confidence                    12445688999999999864 89999999999999998763 3345666554                    


Q ss_pred             cEEEE--EEcCCC-CEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCee
Q psy7108         155 AVSTV--CYSADG-SCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNV  231 (703)
Q Consensus       155 ~V~~i--~~spdg-~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~  231 (703)
                      .|.++  +|+|++ ++|++|+.|++|++||++++++..++..+...      ..|.+++|+|+++.+++++.++      
T Consensus       310 ~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~------~~v~~v~fsp~~~~l~s~~~d~------  377 (524)
T 2j04_B          310 YILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRG------SNLVPVVYCPQIYSYIYSDGAS------  377 (524)
T ss_dssp             CEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSC------CSCCCEEEETTTTEEEEECSSS------
T ss_pred             cEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccccccccc------CcccceEeCCCcCeEEEeCCCC------
Confidence            89999  578888 89999999999999999998877666554320      1477899999999888776653      


Q ss_pred             EEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecc-----------eeeeEEEccch
Q psy7108         232 VLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDP-----------FLLDISITPQS  298 (703)
Q Consensus       232 ~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~-----------~~~~~~~spd~  298 (703)
                      .|++||++++.+...+.+|...|++++|||+|+.|++|+.|+ |++|++..+ .+..           ...+++|+|++
T Consensus       378 tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~-~~~~~~~~~~~~~~~~v~~v~~sp~g  455 (524)
T 2j04_B          378 SLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARR-LLHGIKNSSATQKSLRLWKWDYSIKD  455 (524)
T ss_dssp             EEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS-TTTCC------CCCCEEEECBCCSSS
T ss_pred             cEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHh-hccccccCccceeeeEEEEeccCCCC
Confidence            899999999988888889999999999999999999999999 999997653 2211           12466777776

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=99.95  E-value=2.1e-27  Score=260.38  Aligned_cols=210  Identities=12%  Similarity=0.133  Sum_probs=167.9

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCcee--EEEecCCCcEEEEEEec-CCCEEEEEECCCeEEE
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQ--HETIQLLSDALCVAYKP-DGTEIVVATLDGQLIM  117 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~--~~~~~~~~~V~~v~~sp-dg~~las~s~dg~I~v  117 (703)
                      +...+|...|+|++|+|. ++++||+|+.||+|+|||+.+++..  ....+|.+.|++++|+| ++++|++|+.||+|++
T Consensus       113 ~~~~~~~~~V~~l~~~P~-~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~i  191 (435)
T 4e54_B          113 QKAAPFDRRATSLAWHPT-HPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRL  191 (435)
T ss_dssp             CEEEECSSCEEEEEECSS-CTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEE
T ss_pred             ccCCCCCCCEEEEEEeCC-CCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEE
Confidence            455689999999999994 5679999999999999999876543  33456999999999998 6889999999999999


Q ss_pred             EEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCC
Q psy7108         118 FDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNK  197 (703)
Q Consensus       118 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~  197 (703)
                      ||++++........+.                  +...+.+++|+|++++|++|+.||.|++||++.. .+..       
T Consensus       192 wd~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~-~~~~-------  245 (435)
T 4e54_B          192 QDFKGNILRVFASSDT------------------INIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK-ELWN-------  245 (435)
T ss_dssp             EETTSCEEEEEECCSS------------------CSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC-BCCC-------
T ss_pred             eeccCCceeEEeccCC------------------CCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc-eeEE-------
Confidence            9998765433332222                  1235788999999999999999999999998753 3333       


Q ss_pred             ccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcccee---ecCCccceEEEEEcCCCCEEEEEeCCC-
Q psy7108         198 SLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAAR---VLKPEVRVFCVKFSPTGQAWVAATTEG-  273 (703)
Q Consensus       198 ~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~---~~~h~~~V~~l~~spdg~~l~s~s~Dg-  273 (703)
                       +.+|...|.+++|+|++..++++++.+     ..|++||+++.+....   ..+|...|++++|+|+|++|++++.|+ 
T Consensus       246 -~~~h~~~v~~v~~~p~~~~~~~s~s~d-----~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~  319 (435)
T 4e54_B          246 -LRMHKKKVTHVALNPCCDWFLATASVD-----QTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSE  319 (435)
T ss_dssp             -SBCCSSCEEEEEECTTCSSEEEEEETT-----SBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSC
T ss_pred             -EecccceEEeeeecCCCceEEEEecCc-----ceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCE
Confidence             345666999999999998655444322     3799999988764433   346899999999999999999999999 


Q ss_pred             EEEEEcCCCc
Q psy7108         274 VHIYSLDSGY  283 (703)
Q Consensus       274 v~iwd~~~~~  283 (703)
                      |+||++.++.
T Consensus       320 i~iwd~~~~~  329 (435)
T 4e54_B          320 IRVYSASQWD  329 (435)
T ss_dssp             EEEEESSSSS
T ss_pred             EEEEECCCCc
Confidence            9999987654

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=99.95  E-value=6.8e-27  Score=255.89  Aligned_cols=266  Identities=15%  Similarity=0.212  Sum_probs=212.4

Q ss_pred             eeccCCCccccccc-cCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCC---Cce--eEEEecCCCcEEEEEEecCC
Q psy7108          30 KGDMAARVLKPEVL-SGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVE---TDT--QHETIQLLSDALCVAYKPDG  103 (703)
Q Consensus        30 ~~d~tg~~~~~~~l-~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~---~~~--~~~~~~~~~~V~~v~~spdg  103 (703)
                      .|+.+|+++  ..+ .+|.++|++++|+|. ++++|++|+.||+|++||+.+   +..  ......|...|.+++|+|++
T Consensus        47 ~w~~~g~~~--~~~~~~h~~~V~~~~~s~~-~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~  123 (437)
T 3gre_A           47 MGNLRGKLI--ATLMENEPNSITSSAVSPG-ETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNF  123 (437)
T ss_dssp             GGGCCCCEE--EEECTTTTSCEEEEEEECS-SSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTS
T ss_pred             cccccceEE--eeeccCCCCceEEEEECCC-CCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCC
Confidence            478889998  888 999999999999994 688999999999999999876   321  23344699999999999999


Q ss_pred             CEEEEEECCCeEEEEEcC---CCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEE--EcCCCCEEEEEecCCcEE
Q psy7108         104 TEIVVATLDGQLIMFDVE---SAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVC--YSADGSCILAAGQSKYIC  178 (703)
Q Consensus       104 ~~las~s~dg~I~vwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~--~spdg~~l~s~s~dg~I~  178 (703)
                      +.|++++.||.|++||++   +++....+..+.-        .........+...+.++.  ++++++.|++++.|+.|+
T Consensus       124 ~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i--------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~  195 (437)
T 3gre_A          124 DAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECI--------RKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVI  195 (437)
T ss_dssp             SEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEE--------EEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEE
T ss_pred             CEEEEEeCCCEEEEEEeccccCCceeecccccee--------EEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEE
Confidence            999999999999999995   6666665554310        000000111445677777  678999999999999999


Q ss_pred             EEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeec-CCccceEEE
Q psy7108         179 IYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL-KPEVRVFCV  257 (703)
Q Consensus       179 lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~-~h~~~V~~l  257 (703)
                      +||+++++++..+..+.      |...|.+++|+|+++.+++++.++      .|++||+++++++..+. .|...|.++
T Consensus       196 iwd~~~~~~~~~~~~~~------h~~~v~~~~~s~~~~~l~s~~~dg------~i~iwd~~~~~~~~~~~~~~~~~v~~~  263 (437)
T 3gre_A          196 IFDIRTLERLQIIENSP------RHGAVSSICIDEECCVLILGTTRG------IIDIWDIRFNVLIRSWSFGDHAPITHV  263 (437)
T ss_dssp             EEETTTCCEEEEEECCG------GGCCEEEEEECTTSCEEEEEETTS------CEEEEETTTTEEEEEEBCTTCEEEEEE
T ss_pred             EEeCCCCeeeEEEccCC------CCCceEEEEECCCCCEEEEEcCCC------eEEEEEcCCccEEEEEecCCCCceEEE
Confidence            99999999998887521      334899999999999999888764      89999999998887775 788899999


Q ss_pred             EEc----CCCCEEEEEeCCC-EEEEEcCCCceeccee--------------------------------eeEEEccchhh
Q psy7108         258 KFS----PTGQAWVAATTEG-VHIYSLDSGYVFDPFL--------------------------------LDISITPQSVK  300 (703)
Q Consensus       258 ~~s----pdg~~l~s~s~Dg-v~iwd~~~~~~~~~~~--------------------------------~~~~~spd~~~  300 (703)
                      +|+    |++++|++++.|+ |++||+.+++....+.                                .+++|+ ++  
T Consensus       264 ~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~--  340 (437)
T 3gre_A          264 EVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-ND--  340 (437)
T ss_dssp             EECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TT--
T ss_pred             EeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cc--
Confidence            665    4678999999999 9999999887543332                                335666 45  


Q ss_pred             hHhhcCCcceEEEEEEecCchh
Q psy7108         301 EALADKDYAKALMMSLKLNEQG  322 (703)
Q Consensus       301 ~~l~sg~~~~~l~la~~l~~~~  322 (703)
                      .++++++.|+.+++ |++....
T Consensus       341 ~~l~s~~~d~~i~~-wd~~~~~  361 (437)
T 3gre_A          341 KILLTDEATSSIVM-FSLNELS  361 (437)
T ss_dssp             EEEEEEGGGTEEEE-EETTCGG
T ss_pred             eEEEecCCCCeEEE-EECCCcc
Confidence            67889999999999 9988664

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=99.95  E-value=6.5e-27  Score=253.54  Aligned_cols=252  Identities=9%  Similarity=0.173  Sum_probs=205.5

Q ss_pred             cCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCC----CceeEEEecCCCcEEEEEEecC-CCEEEEEECCCeEEEE
Q psy7108          44 SGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVE----TDTQHETIQLLSDALCVAYKPD-GTEIVVATLDGQLIMF  118 (703)
Q Consensus        44 ~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~----~~~~~~~~~~~~~V~~v~~spd-g~~las~s~dg~I~vw  118 (703)
                      ..|...|++++|+|  ++.+|++|+.||.|++||+.+    ......+..|...|.+++|+|+ +++|++++.|+.|++|
T Consensus        64 ~~~~~~v~~~~~s~--~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iw  141 (416)
T 2pm9_A           64 LQVDSKFNDLDWSH--NNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIW  141 (416)
T ss_dssp             CCCSSCEEEEEECS--SSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBC
T ss_pred             EecCCceEEEEECC--CCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEE
Confidence            36899999999999  999999999999999999987    3355666679999999999998 8999999999999999


Q ss_pred             EcCCCc------EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC-CCEEEEEecCCcEEEEECCCCceEEEE
Q psy7108         119 DVESAA------QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD-GSCILAAGQSKYICIYSSREGILLKKF  191 (703)
Q Consensus       119 d~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd-g~~l~s~s~dg~I~lwD~~~~~~~~~~  191 (703)
                      |+++++      ....+                 .....|...|.+++|+|+ +..+++++.|+.|++||+++++.+..+
T Consensus       142 d~~~~~~~~~~~~~~~~-----------------~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~  204 (416)
T 2pm9_A          142 DMNKCTESPSNYTPLTP-----------------GQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHL  204 (416)
T ss_dssp             BTTTTSSCTTTCCCBCC-----------------CCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEE
T ss_pred             ECCCCcccccccccccc-----------------ccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEE
Confidence            998875      21111                 011235568999999999 789999999999999999999988887


Q ss_pred             EeccCCccccccccceeeeeccCCC-EEEEEcccCCCCCeeEEECCCCCCC-ccceeec-CCccceEEEEEcC-CCCEEE
Q psy7108         192 TITQNKSLDGINDFINRRKMTEFGN-VSLIETRETHEGGNVVLKLPGVKKG-DMAARVL-KPEVRVFCVKFSP-TGQAWV  267 (703)
Q Consensus       192 ~~~~~~~~~~~~~~v~~~~~spdg~-~l~~~~~~~~~~~~~~i~iwd~~~~-~~~~~~~-~h~~~V~~l~~sp-dg~~l~  267 (703)
                      ..+..  ..++...+.+++|+|++. .+++++.++   ....|++||++++ .....+. +|...|.+++|+| ++++|+
T Consensus       205 ~~~~~--~~~~~~~v~~~~~~~~~~~~l~~~~~d~---~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~  279 (416)
T 2pm9_A          205 SYTSP--NSGIKQQLSVVEWHPKNSTRVATATGSD---NDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLL  279 (416)
T ss_dssp             CCCCC--SSCCCCCEEEEEECSSCTTEEEEEECCS---SSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEE
T ss_pred             ecccc--ccccCCceEEEEECCCCCCEEEEEECCC---CCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEE
Confidence            65432  123356899999999985 555555432   1127999999986 5666777 8999999999999 999999


Q ss_pred             EEeCCC-EEEEEcCCCceecce------eeeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108         268 AATTEG-VHIYSLDSGYVFDPF------LLDISITPQSVKEALADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       268 s~s~Dg-v~iwd~~~~~~~~~~------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~  321 (703)
                      +++.|+ |++||+.+++....+      ..+++|+|++ ..++++++.++.+++ |++...
T Consensus       280 s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~-~~~l~s~~~d~~i~i-w~~~~~  338 (416)
T 2pm9_A          280 SSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEA-PDLFACASFDNKIEV-QTLQNL  338 (416)
T ss_dssp             EEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTC-TTEEEECCSSSEEEE-EESCCC
T ss_pred             EEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCC-CCEEEEEecCCcEEE-EEccCC
Confidence            999999 999999998876544      3579999987 247889999999998 998754

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=99.95  E-value=1.6e-26  Score=253.16  Aligned_cols=263  Identities=11%  Similarity=0.175  Sum_probs=200.3

Q ss_pred             CCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc-----------eeEEEecCC------------CcEEEEEEec
Q psy7108          45 GHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD-----------TQHETIQLL------------SDALCVAYKP  101 (703)
Q Consensus        45 gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~-----------~~~~~~~~~------------~~V~~v~~sp  101 (703)
                      .|.+.|++++|+|  ++++||+|+.||.|++||+.++.           ....+..|.            +.|.+++|+|
T Consensus        26 ~~~~~V~~v~~s~--~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~  103 (447)
T 3dw8_B           26 AEADIISTVEFNH--SGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLP  103 (447)
T ss_dssp             CGGGSEEEEEECS--SSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECC
T ss_pred             cccCcEEEEEECC--CCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcC
Confidence            4689999999999  99999999999999999998775           255666787            8899999999


Q ss_pred             CC--CEEEEEECCCeEEEEEcCCCcEEEEEeccccCCC-----CCC-CCcc--------------chhhcccCCccEEEE
Q psy7108         102 DG--TEIVVATLDGQLIMFDVESAAQVGSVEARRDLDS-----GRL-DTDL--------------VTREQSLKAKAVSTV  159 (703)
Q Consensus       102 dg--~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~-----~~~-~~~~--------------~~~~~~~~~~~V~~i  159 (703)
                      ++  ..|++++.|+.|++||+.+++..........-.+     ... ....              .......|...|.++
T Consensus       104 ~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~  183 (447)
T 3dw8_B          104 QKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSI  183 (447)
T ss_dssp             CCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEE
T ss_pred             CCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEE
Confidence            98  7999999999999999987554321100000000     000 0000              001124577899999


Q ss_pred             EEcCCCCEEEEEecCCcEEEEECCC-CceEEEEEeccCCccccccccceeeeeccCC-CEEEEEcccCCCCCeeEEECCC
Q psy7108         160 CYSADGSCILAAGQSKYICIYSSRE-GILLKKFTITQNKSLDGINDFINRRKMTEFG-NVSLIETRETHEGGNVVLKLPG  237 (703)
Q Consensus       160 ~~spdg~~l~s~s~dg~I~lwD~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg-~~l~~~~~~~~~~~~~~i~iwd  237 (703)
                      +|+|++++|++| .|+.|++||+++ ++....+... .....+|...|.+++|+|++ +.+++++.++      .|++||
T Consensus       184 ~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg------~i~iwd  255 (447)
T 3dw8_B          184 SINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIK-PANMEELTEVITAAEFHPNSCNTFVYSSSKG------TIRLCD  255 (447)
T ss_dssp             EECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECC-CSSGGGCCCCEEEEEECSSCTTEEEEEETTS------CEEEEE
T ss_pred             EEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecc-cccccccCcceEEEEECCCCCcEEEEEeCCC------eEEEEE
Confidence            999999999998 799999999994 4444444322 22456677899999999999 8888877664      899999


Q ss_pred             CCCCcc----ceeecCCcc------------ceEEEEEcCCCCEEEEEeCCC-EEEEEcCC-Cceecceee---------
Q psy7108         238 VKKGDM----AARVLKPEV------------RVFCVKFSPTGQAWVAATTEG-VHIYSLDS-GYVFDPFLL---------  290 (703)
Q Consensus       238 ~~~~~~----~~~~~~h~~------------~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~-~~~~~~~~~---------  290 (703)
                      +++++.    ...+..|..            .|.+++|+|+|++|++++. + |++||+.+ ++....+..         
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~  334 (447)
T 3dw8_B          256 MRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLC  334 (447)
T ss_dssp             TTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHH
T ss_pred             CcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccccccc
Confidence            999886    677777776            8999999999999999999 8 99999987 665544431         


Q ss_pred             ------------eEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108         291 ------------DISITPQSVKEALADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       291 ------------~~~~spd~~~~~l~sg~~~~~l~la~~l~~~  321 (703)
                                  .++|+|++  .++++++.++.+.+ |++...
T Consensus       335 ~~~~~~~i~~~~~~~~s~~~--~~l~s~s~dg~v~i-wd~~~~  374 (447)
T 3dw8_B          335 SLYENDCIFDKFECCWNGSD--SVVMTGSYNNFFRM-FDRNTK  374 (447)
T ss_dssp             HHHHTSGGGCCCCEEECTTS--SEEEEECSTTEEEE-EETTTC
T ss_pred             ccccccccccceEEEECCCC--CEEEEeccCCEEEE-EEcCCC
Confidence                        28999999  78899999999999 998764

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=99.95  E-value=3.6e-26  Score=242.56  Aligned_cols=244  Identities=14%  Similarity=0.230  Sum_probs=193.4

Q ss_pred             CCCccccccccCCCcCeEEEEEcCCCC---CCEEEEEeCCCcEEEEEcCC-Ccee-EEEecCCCcEEEEEEecCCCEEEE
Q psy7108          34 AARVLKPEVLSGHEGPVSCIEFSPVLS---STGMVSASWDKTVKLWNAVE-TDTQ-HETIQLLSDALCVAYKPDGTEIVV  108 (703)
Q Consensus        34 tg~~~~~~~l~gH~~~V~~l~~sp~~d---g~~L~sgs~Dg~V~iWd~~~-~~~~-~~~~~~~~~V~~v~~spdg~~las  108 (703)
                      ..+.+  ..+.+|.+.|++++|+|  +   |++|++|+.||.|++||+.+ +... .....|...|.+++|+|++++|++
T Consensus        28 ~~~~~--~~~~~h~~~v~~~~~~~--~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s  103 (368)
T 3mmy_A           28 PMKDI--EVTSSPDDSIGCLSFSP--PTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFT  103 (368)
T ss_dssp             TTCCE--ECSSCCSSCEEEEEECC--TTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEE
T ss_pred             Cccee--EeccCCCCceEEEEEcC--CCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEE
Confidence            34555  78899999999999999  7   69999999999999999987 4444 556679999999999999999999


Q ss_pred             EECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEE--cCCCCEEEEEecCCcEEEEECCCCc
Q psy7108         109 ATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCY--SADGSCILAAGQSKYICIYSSREGI  186 (703)
Q Consensus       109 ~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~--spdg~~l~s~s~dg~I~lwD~~~~~  186 (703)
                      ++.||.|++||+++++.... ..|.                    ..|.+++|  +|++++|++++.|+.|++||+++++
T Consensus       104 ~~~dg~v~iwd~~~~~~~~~-~~~~--------------------~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~  162 (368)
T 3mmy_A          104 ASCDKTAKMWDLSSNQAIQI-AQHD--------------------APVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSN  162 (368)
T ss_dssp             EETTSEEEEEETTTTEEEEE-EECS--------------------SCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSS
T ss_pred             EcCCCcEEEEEcCCCCceee-cccc--------------------CceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCc
Confidence            99999999999999887653 3343                    38999999  9999999999999999999999988


Q ss_pred             eEEEEEeccCC---------------------------------ccccccccceeeeeccCCCE----EEEEcccCCCCC
Q psy7108         187 LLKKFTITQNK---------------------------------SLDGINDFINRRKMTEFGNV----SLIETRETHEGG  229 (703)
Q Consensus       187 ~~~~~~~~~~~---------------------------------~~~~~~~~v~~~~~spdg~~----l~~~~~~~~~~~  229 (703)
                      ++..+..+...                                 ..........++++.+++..    +++++.++    
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg----  238 (368)
T 3mmy_A          163 PMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEG----  238 (368)
T ss_dssp             CSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTS----
T ss_pred             EEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCC----
Confidence            77776643310                                 00011123344555544443    66666553    


Q ss_pred             eeEEECCCCCCC---ccceeecCCcc------------ceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecce-----
Q psy7108         230 NVVLKLPGVKKG---DMAARVLKPEV------------RVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPF-----  288 (703)
Q Consensus       230 ~~~i~iwd~~~~---~~~~~~~~h~~------------~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~-----  288 (703)
                        .+++||++..   .....+..|..            .|.+++|+|++++|++++.|| |++||+.+++....+     
T Consensus       239 --~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~  316 (368)
T 3mmy_A          239 --RVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQ  316 (368)
T ss_dssp             --EEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSS
T ss_pred             --cEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCC
Confidence              8999999887   45666677766            699999999999999999999 999999998775443     


Q ss_pred             -eeeEEEccchhhhHhhcCCcce
Q psy7108         289 -LLDISITPQSVKEALADKDYAK  310 (703)
Q Consensus       289 -~~~~~~spd~~~~~l~sg~~~~  310 (703)
                       ..+++|+|++  .++++++.++
T Consensus       317 ~v~~~~~s~~g--~~l~~~s~d~  337 (368)
T 3mmy_A          317 PISACCFNHNG--NIFAYASSYD  337 (368)
T ss_dssp             CEEEEEECTTS--SCEEEEECCC
T ss_pred             CceEEEECCCC--CeEEEEeccc
Confidence             4679999999  7777766544

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=99.95  E-value=3.1e-26  Score=252.68  Aligned_cols=270  Identities=16%  Similarity=0.191  Sum_probs=214.5

Q ss_pred             ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEe--cCCC
Q psy7108          28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYK--PDGT  104 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~s--pdg~  104 (703)
                      +++|| .+++++  ..+.+|.+.|++++|+|  ++ .|++|+.||+|++||+.+++.......|.+.|.+++|+  ++++
T Consensus       144 i~vwd~~~~~~~--~~~~~h~~~V~~l~~~~--~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~  218 (464)
T 3v7d_B          144 IRVYDSINKKFL--LQLSGHDGGVWALKYAH--GG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIK  218 (464)
T ss_dssp             EEEEETTTTEEE--EEECCCSSCEEEEEECS--TT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCE
T ss_pred             EEEEECCCCcEE--EEEeCCCcCEEEEEEcC--CC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCC
Confidence            66777 578888  89999999999999999  66 99999999999999999987777777899999999998  5778


Q ss_pred             EEEEEECCCeEEEEEcCCCcEEEEEeccccCCC---CCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEE
Q psy7108         105 EIVVATLDGQLIMFDVESAAQVGSVEARRDLDS---GRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYS  181 (703)
Q Consensus       105 ~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD  181 (703)
                      .+++++.|+.|++||+++++.............   ..............|...+.++  +++++++++++.|+.|++||
T Consensus       219 ~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd  296 (464)
T 3v7d_B          219 YIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWD  296 (464)
T ss_dssp             EEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEE
T ss_pred             EEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEE
Confidence            999999999999999988764432221111000   0000001112233456677776  67899999999999999999


Q ss_pred             CCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcC
Q psy7108         182 SREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSP  261 (703)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~sp  261 (703)
                      +++++++..+..+.        ..+.+++|+|+++.+++++.++      .|++||+++++++..+.+|...|.+++|+ 
T Consensus       297 ~~~~~~~~~~~~~~--------~~v~~~~~~~~~~~l~sg~~dg------~i~vwd~~~~~~~~~~~~h~~~v~~~~~~-  361 (464)
T 3v7d_B          297 VAQMKCLYILSGHT--------DRIYSTIYDHERKRCISASMDT------TIRIWDLENGELMYTLQGHTALVGLLRLS-  361 (464)
T ss_dssp             TTTTEEEEEECCCS--------SCEEEEEEETTTTEEEEEETTS------CEEEEETTTTEEEEEECCCSSCEEEEEEC-
T ss_pred             CCCCcEEEEecCCC--------CCEEEEEEcCCCCEEEEEeCCC------cEEEEECCCCcEEEEEeCCCCcEEEEEEc-
Confidence            99999988876544        4899999999999999888764      89999999999999999999999999997 


Q ss_pred             CCCEEEEEeCCC-EEEEEcCCCceecce-----eeeEEEccchhhhHhhcCCcceEEEEEEecCchhHH
Q psy7108         262 TGQAWVAATTEG-VHIYSLDSGYVFDPF-----LLDISITPQSVKEALADKDYAKALMMSLKLNEQGLI  324 (703)
Q Consensus       262 dg~~l~s~s~Dg-v~iwd~~~~~~~~~~-----~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~~~~  324 (703)
                       ++++++++.|| |++||+.++......     ...++++|++  .++++++ ++.+.+ |++.....+
T Consensus       362 -~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~-dg~i~i-wd~~~g~~~  425 (464)
T 3v7d_B          362 -DKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSD--NILVSGS-ENQFNI-YNLRSGKLV  425 (464)
T ss_dssp             -SSEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECS--SEEEEEE-TTEEEE-EETTTCCEE
T ss_pred             -CCEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCC--CEEEEec-CCeEEE-EECCCCcEE
Confidence             57999999999 999999987654333     2457889998  7788877 788888 998765443

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=99.95  E-value=3e-26  Score=270.91  Aligned_cols=242  Identities=12%  Similarity=0.157  Sum_probs=214.6

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEc
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDV  120 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~  120 (703)
                      +++.+|.+.|++++|+|  ++++|++|+.||.|++||+.++.....+..|.+.|.+++|+|++++|++++.||.|++||+
T Consensus         7 ~~~~~h~~~v~~i~~sp--~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~   84 (814)
T 3mkq_A            7 KTFSNRSDRVKGIDFHP--TEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNY   84 (814)
T ss_dssp             EEEEEECSCEEEEEECS--SSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEET
T ss_pred             eeeecCCCceEEEEECC--CCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEEC
Confidence            78899999999999999  9999999999999999999998877888889999999999999999999999999999999


Q ss_pred             CCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCC-ceEEEEEeccCCcc
Q psy7108         121 ESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREG-ILLKKFTITQNKSL  199 (703)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~-~~~~~~~~~~~~~~  199 (703)
                      .+++.+..+.+|..                    .|++++|+|++++|++++.|+.|++||++++ .....+..+.    
T Consensus        85 ~~~~~~~~~~~~~~--------------------~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~----  140 (814)
T 3mkq_A           85 NTGEKVVDFEAHPD--------------------YIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHE----  140 (814)
T ss_dssp             TTCCEEEEEECCSS--------------------CEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCS----
T ss_pred             CCCcEEEEEecCCC--------------------CEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCC----
Confidence            99999999888765                    8999999999999999999999999999987 5555555443    


Q ss_pred             ccccccceeeeecc-CCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCc-cceEEEEEcC--CCCEEEEEeCCC-E
Q psy7108         200 DGINDFINRRKMTE-FGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPE-VRVFCVKFSP--TGQAWVAATTEG-V  274 (703)
Q Consensus       200 ~~~~~~v~~~~~sp-dg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~-~~V~~l~~sp--dg~~l~s~s~Dg-v  274 (703)
                          ..+.+++|+| ++..+++++.++      .|++||+.+++.......+. ..+.+++|+|  +++++++++.|| |
T Consensus       141 ----~~v~~~~~~p~~~~~l~~~~~dg------~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i  210 (814)
T 3mkq_A          141 ----HFVMCVAFNPKDPSTFASGCLDR------TVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTI  210 (814)
T ss_dssp             ----SCEEEEEEETTEEEEEEEEETTS------EEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEE
T ss_pred             ----CcEEEEEEEcCCCCEEEEEeCCC------eEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEE
Confidence                4899999999 788888877664      89999999888777776654 8899999999  999999999999 9


Q ss_pred             EEEEcCCCceecce------eeeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108         275 HIYSLDSGYVFDPF------LLDISITPQSVKEALADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       275 ~iwd~~~~~~~~~~------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~  321 (703)
                      ++||+.+++....+      ...++|+|++  ..+++++.++.+.+ |++...
T Consensus       211 ~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~dg~v~v-wd~~~~  260 (814)
T 3mkq_A          211 KIWDYQTKSCVATLEGHMSNVSFAVFHPTL--PIIISGSEDGTLKI-WNSSTY  260 (814)
T ss_dssp             EEEETTTTEEEEEEECCSSCEEEEEECSSS--SEEEEEETTSCEEE-EETTTC
T ss_pred             EEEECCCCcEEEEEcCCCCCEEEEEEcCCC--CEEEEEeCCCeEEE-EECCCC
Confidence            99999988765444      3578999999  78999999999998 887653

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=99.95  E-value=1.8e-25  Score=231.85  Aligned_cols=247  Identities=14%  Similarity=0.212  Sum_probs=206.5

Q ss_pred             ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCC---ceeEEEecCCCcEEEEEEecCC
Q psy7108          28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVET---DTQHETIQLLSDALCVAYKPDG  103 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~---~~~~~~~~~~~~V~~v~~spdg  103 (703)
                      +++|| .+++..  ..+.+|.+.|.+++|+|  ++++|++|+.||.+++|++...   ........|...|.+++|  ++
T Consensus        41 v~vw~~~~~~~~--~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~  114 (313)
T 3odt_A           41 VRLWSKDDQWLG--TVVYTGQGFLNSVCYDS--EKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QD  114 (313)
T ss_dssp             EEEEEESSSEEE--EEEEECSSCEEEEEEET--TTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ET
T ss_pred             EEEEECCCCEEE--EEeecCCccEEEEEECC--CCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cC
Confidence            56666 355666  78889999999999999  9999999999999999998754   345566679999999999  57


Q ss_pred             CEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC-CCCEEEEEecCCcEEEEEC
Q psy7108         104 TEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA-DGSCILAAGQSKYICIYSS  182 (703)
Q Consensus       104 ~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp-dg~~l~s~s~dg~I~lwD~  182 (703)
                      +.+++++.|+.|++||  .++....+..|..                    .+.+++|+| +++.+++++.|+.|++|| 
T Consensus       115 ~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~--------------------~v~~~~~~~~~~~~l~~~~~d~~i~i~d-  171 (313)
T 3odt_A          115 GVVISGSWDKTAKVWK--EGSLVYNLQAHNA--------------------SVWDAKVVSFSENKFLTASADKTIKLWQ-  171 (313)
T ss_dssp             TEEEEEETTSEEEEEE--TTEEEEEEECCSS--------------------CEEEEEEEETTTTEEEEEETTSCEEEEE-
T ss_pred             CEEEEEeCCCCEEEEc--CCcEEEecccCCC--------------------ceeEEEEccCCCCEEEEEECCCCEEEEe-
Confidence            8999999999999999  6777777777654                    899999988 999999999999999999 


Q ss_pred             CCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCC
Q psy7108         183 REGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPT  262 (703)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spd  262 (703)
                       ..+....+...       +...+.+++|+|++. +++++.++      .|++||+++++.+..+..|...|.+++|+|+
T Consensus       172 -~~~~~~~~~~~-------~~~~i~~~~~~~~~~-~~~~~~dg------~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~  236 (313)
T 3odt_A          172 -NDKVIKTFSGI-------HNDVVRHLAVVDDGH-FISCSNDG------LIKLVDMHTGDVLRTYEGHESFVYCIKLLPN  236 (313)
T ss_dssp             -TTEEEEEECSS-------CSSCEEEEEEEETTE-EEEEETTS------EEEEEETTTCCEEEEEECCSSCEEEEEECTT
T ss_pred             -cCceEEEEecc-------CcccEEEEEEcCCCe-EEEccCCC------eEEEEECCchhhhhhhhcCCceEEEEEEecC
Confidence             44555555431       335899999999999 66666553      8999999999999999999999999999999


Q ss_pred             CCEEEEEeCCC-EEEEEcCCCceecce------eeeEEEccchhhhHhhcCCcceEEEEEEecCchhH
Q psy7108         263 GQAWVAATTEG-VHIYSLDSGYVFDPF------LLDISITPQSVKEALADKDYAKALMMSLKLNEQGL  323 (703)
Q Consensus       263 g~~l~s~s~Dg-v~iwd~~~~~~~~~~------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~~~  323 (703)
                      + .+++++.|+ |++||+.+++....+      ...++|+|++  . +.+++.++.+.+ |+++....
T Consensus       237 ~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~--~-~~~~~~dg~i~i-w~~~~~~~  299 (313)
T 3odt_A          237 G-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNG--D-IIVGSSDNLVRI-FSQEKSRW  299 (313)
T ss_dssp             S-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTS--C-EEEEETTSCEEE-EESCGGGC
T ss_pred             C-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCC--C-EEEEeCCCcEEE-EeCCCCce
Confidence            9 589999999 999999998875544      3578999999  4 456888999998 99887643

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=99.95  E-value=6.7e-26  Score=267.94  Aligned_cols=248  Identities=14%  Similarity=0.101  Sum_probs=214.8

Q ss_pred             ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEE
Q psy7108          28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEI  106 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~l  106 (703)
                      +.+|| .+++.+  ..+.+|.++|++++|+|  ++++|++|+.||.|++||+.+++.......|.+.|.+++|+|+++.|
T Consensus        37 v~iwd~~~~~~~--~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l  112 (814)
T 3mkq_A           37 VEIWNYETQVEV--RSIQVTETPVRAGKFIA--RKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYV  112 (814)
T ss_dssp             EEEEETTTTEEE--EEEECCSSCEEEEEEEG--GGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEE
T ss_pred             EEEEECCCCceE--EEEecCCCcEEEEEEeC--CCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEE
Confidence            66777 578888  89999999999999999  99999999999999999999998888888899999999999999999


Q ss_pred             EEEECCCeEEEEEcCCC-cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC-CCCEEEEEecCCcEEEEECCC
Q psy7108         107 VVATLDGQLIMFDVESA-AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA-DGSCILAAGQSKYICIYSSRE  184 (703)
Q Consensus       107 as~s~dg~I~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp-dg~~l~s~s~dg~I~lwD~~~  184 (703)
                      ++++.||.|++||++++ .....+.+|..                    .|.+++|+| +++.+++++.|+.|++||+++
T Consensus       113 ~~~~~dg~i~vw~~~~~~~~~~~~~~~~~--------------------~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~  172 (814)
T 3mkq_A          113 LSGSDDLTVKLWNWENNWALEQTFEGHEH--------------------FVMCVAFNPKDPSTFASGCLDRTVKVWSLGQ  172 (814)
T ss_dssp             EEEETTSEEEEEEGGGTSEEEEEEECCSS--------------------CEEEEEEETTEEEEEEEEETTSEEEEEETTC
T ss_pred             EEEcCCCEEEEEECCCCceEEEEEcCCCC--------------------cEEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence            99999999999999987 66667776654                    899999999 889999999999999999998


Q ss_pred             CceEEEEEeccCCccccccccceeeeecc--CCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCC
Q psy7108         185 GILLKKFTITQNKSLDGINDFINRRKMTE--FGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPT  262 (703)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~v~~~~~sp--dg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spd  262 (703)
                      +.....+..+.       ...+..++|+|  ++..+++++.++      .|++||..+++....+.+|...|.+++|+|+
T Consensus       173 ~~~~~~~~~~~-------~~~v~~~~~~~~~~~~~l~~~~~dg------~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~  239 (814)
T 3mkq_A          173 STPNFTLTTGQ-------ERGVNYVDYYPLPDKPYMITASDDL------TIKIWDYQTKSCVATLEGHMSNVSFAVFHPT  239 (814)
T ss_dssp             SSCSEEEECCC-------TTCCCEEEECCSTTCCEEEEECTTS------EEEEEETTTTEEEEEEECCSSCEEEEEECSS
T ss_pred             CcceeEEecCC-------CCCEEEEEEEECCCCCEEEEEeCCC------EEEEEECCCCcEEEEEcCCCCCEEEEEEcCC
Confidence            87777665433       24788999999  899998888764      8999999999999889999999999999999


Q ss_pred             CCEEEEEeCCC-EEEEEcCCCceecce------eeeEEEccchhhhHhhcCCcceEE
Q psy7108         263 GQAWVAATTEG-VHIYSLDSGYVFDPF------LLDISITPQSVKEALADKDYAKAL  312 (703)
Q Consensus       263 g~~l~s~s~Dg-v~iwd~~~~~~~~~~------~~~~~~spd~~~~~l~sg~~~~~l  312 (703)
                      ++++++++.|| |++|++.+++....+      ...++|+|++...+++.+..++..
T Consensus       240 ~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~  296 (814)
T 3mkq_A          240 LPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFT  296 (814)
T ss_dssp             SSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEE
T ss_pred             CCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEE
Confidence            99999999999 999999988765443      367899999844346665544433

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=99.95  E-value=5.9e-26  Score=244.72  Aligned_cols=252  Identities=12%  Similarity=0.090  Sum_probs=204.0

Q ss_pred             CCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEe-------------cCCCcEEEEEEe
Q psy7108          34 AARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETI-------------QLLSDALCVAYK  100 (703)
Q Consensus        34 tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~-------------~~~~~V~~v~~s  100 (703)
                      .++..  ..+.+|.++|++++|+|. ++++|++|+.||.|++||+.++.......             .|...|.+++|+
T Consensus        32 ~~~~~--~~~~~h~~~v~~~~~s~~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  108 (408)
T 4a11_B           32 LNKDR--DVERIHGGGINTLDIEPV-EGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWY  108 (408)
T ss_dssp             ECTTE--EECCCCSSCEEEEEECTT-TCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEEC
T ss_pred             cCcce--eeeeccCCcEEEEEEecC-CCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEc
Confidence            45666  788999999999999995 68999999999999999998775433322             388999999999


Q ss_pred             c-CCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC---CCEEEEEecCCc
Q psy7108         101 P-DGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD---GSCILAAGQSKY  176 (703)
Q Consensus       101 p-dg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd---g~~l~s~s~dg~  176 (703)
                      | ++..|++++.|+.|++||+++++....+....                     .+.+++|+|.   +.++++++.|+.
T Consensus       109 ~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~  167 (408)
T 4a11_B          109 PHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEE---------------------TVYSHHMSPVSTKHCLVAVGTRGPK  167 (408)
T ss_dssp             TTCTTCEEEEETTSEEEEEETTTTEEEEEEECSS---------------------CEEEEEECSSCSSCCEEEEEESSSS
T ss_pred             cCCCcEEEEEeCCCeEEEeeCCCCccceeccCCC---------------------ceeeeEeecCCCCCcEEEEEcCCCe
Confidence            9 77899999999999999999999888776432                     6899999884   459999999999


Q ss_pred             EEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCE-EEEEcccCCCCCeeEEECCCCCCCc-cceee-------
Q psy7108         177 ICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNV-SLIETRETHEGGNVVLKLPGVKKGD-MAARV-------  247 (703)
Q Consensus       177 I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~-l~~~~~~~~~~~~~~i~iwd~~~~~-~~~~~-------  247 (703)
                      |++||+++++.+..+..+.        ..|.+++|+|+++. +++++.++      .|++||++++. ....+       
T Consensus       168 v~~~d~~~~~~~~~~~~~~--------~~v~~~~~~~~~~~ll~~~~~dg------~i~i~d~~~~~~~~~~~~~~~~~~  233 (408)
T 4a11_B          168 VQLCDLKSGSCSHILQGHR--------QEILAVSWSPRYDYILATASADS------RVKLWDVRRASGCLITLDQHNGKK  233 (408)
T ss_dssp             EEEEESSSSCCCEEECCCC--------SCEEEEEECSSCTTEEEEEETTS------CEEEEETTCSSCCSEECCTTTTCS
T ss_pred             EEEEeCCCcceeeeecCCC--------CcEEEEEECCCCCcEEEEEcCCC------cEEEEECCCCCccccccccccccc
Confidence            9999999998887776443        48999999999995 55655543      79999998765 22222       


Q ss_pred             --------cCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCcee---------------------------------
Q psy7108         248 --------LKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVF---------------------------------  285 (703)
Q Consensus       248 --------~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~---------------------------------  285 (703)
                              ..|...|.+++|+|++++|++++.|+ +++||+.+++..                                 
T Consensus       234 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (408)
T 4a11_B          234 SQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYG  313 (408)
T ss_dssp             CCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEET
T ss_pred             ceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecC
Confidence                    46888999999999999999999999 999998875431                                 


Q ss_pred             --------------------cceeeeEEEccchhhhHhhcCCcceEEEEEEecCchhHHHH
Q psy7108         286 --------------------DPFLLDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIH  326 (703)
Q Consensus       286 --------------------~~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~~~~~~  326 (703)
                                          .....+++|+|++  .++++++.++.+.+ |++...+.+..
T Consensus       314 ~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~--~~l~s~~~dg~i~i-w~~~~~~~~~~  371 (408)
T 4a11_B          314 STIAVYTVYSGEQITMLKGHYKTVDCCVFQSNF--QELYSGSRDCNILA-WVPSLYEPVPD  371 (408)
T ss_dssp             TEEEEEETTTCCEEEEECCCSSCEEEEEEETTT--TEEEEEETTSCEEE-EEECC------
T ss_pred             CEEEEEECcCCcceeeeccCCCeEEEEEEcCCC--CEEEEECCCCeEEE-EeCCCCCccCC
Confidence                                1112568999999  88999999999999 99987755443

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=99.95  E-value=2e-26  Score=248.13  Aligned_cols=251  Identities=14%  Similarity=0.193  Sum_probs=206.8

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc------eeEEEecCCCcEEEEEEecC----C---CEEE
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD------TQHETIQLLSDALCVAYKPD----G---TEIV  107 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~------~~~~~~~~~~~V~~v~~spd----g---~~la  107 (703)
                      .++.+|.++|++++|+|    ++|++|+.||+|++|++.+++      ....+..|...|.+++|+|+    +   ++|+
T Consensus        10 ~~~~~h~~~i~~~~~~~----~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~   85 (397)
T 1sq9_A           10 NAGKAHDADIFSVSACN----SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVA   85 (397)
T ss_dssp             EESSCSSSCEEEEEECS----SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEE
T ss_pred             hhhhhhhcCeEEEEecC----CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEE
Confidence            67889999999999987    799999999999999998886      57777789999999999999    9   9999


Q ss_pred             EEECCCeEEEEEcCCCcE-----EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEc----CCCCE-EEEEecCCcE
Q psy7108         108 VATLDGQLIMFDVESAAQ-----VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYS----ADGSC-ILAAGQSKYI  177 (703)
Q Consensus       108 s~s~dg~I~vwd~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~s----pdg~~-l~s~s~dg~I  177 (703)
                      +++.|+.|++||+.+++.     ...+..+...               .....|.+++|+    |+++. |++++.|+.|
T Consensus        86 s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i  150 (397)
T 1sq9_A           86 TTSFSGDLLFYRITREDETKKVIFEKLDLLDSD---------------MKKHSFWALKWGASNDRLLSHRLVATDVKGTT  150 (397)
T ss_dssp             EEETTSCEEEEEEEECTTTCCEEEEEECCSCTT---------------GGGSCEEEEEEECCC----CEEEEEEETTSCE
T ss_pred             EEcCCCCEEEEEccCCcccccccceeecccccc---------------cCCCcEEEEEEeeccCCCCceEEEEEeCCCcE
Confidence            999999999999998876     7777666310               002389999999    99999 9999999999


Q ss_pred             EEEECCC------CceEE-----EEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcccee
Q psy7108         178 CIYSSRE------GILLK-----KFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAAR  246 (703)
Q Consensus       178 ~lwD~~~------~~~~~-----~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~  246 (703)
                      ++||+++      ++.+.     .+.... .....+...+.+++|+|++ .+++++.++      .|++||+++++.+..
T Consensus       151 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~-~l~~~~~dg------~i~i~d~~~~~~~~~  222 (397)
T 1sq9_A          151 YIWKFHPFADESNSLTLNWSPTLELQGTV-ESPMTPSQFATSVDISERG-LIATGFNNG------TVQISELSTLRPLYN  222 (397)
T ss_dssp             EEEEEESSSSHHHHTTTCCCCEEEEEEEE-CCSSSSCCCCCEEEECTTS-EEEEECTTS------EEEEEETTTTEEEEE
T ss_pred             EEEeCCccccccccceeeccCcceeeeee-ccccCCCCCceEEEECCCc-eEEEEeCCC------cEEEEECCCCceeEE
Confidence            9999998      65554     543210 0012245589999999999 777777653      899999999998888


Q ss_pred             ecC---C---ccceEEEEEcCCCCEEEEEeCC---C-EEEEEcCCCceecce-------------------eeeEEEccc
Q psy7108         247 VLK---P---EVRVFCVKFSPTGQAWVAATTE---G-VHIYSLDSGYVFDPF-------------------LLDISITPQ  297 (703)
Q Consensus       247 ~~~---h---~~~V~~l~~spdg~~l~s~s~D---g-v~iwd~~~~~~~~~~-------------------~~~~~~spd  297 (703)
                      +..   |   ...|.+++|+|++++|++++.|   + |++||+.+++....+                   ..+++|+|+
T Consensus       223 ~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  302 (397)
T 1sq9_A          223 FESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDS  302 (397)
T ss_dssp             EECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSS
T ss_pred             EeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCC
Confidence            888   8   9999999999999999999999   8 999999988764333                   356899999


Q ss_pred             hhhhHhhcCCcceEEEEEEecCch
Q psy7108         298 SVKEALADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       298 ~~~~~l~sg~~~~~l~la~~l~~~  321 (703)
                      +  .++++++.++.+.+ |++...
T Consensus       303 ~--~~l~~~~~dg~i~i-wd~~~~  323 (397)
T 1sq9_A          303 G--ETLCSAGWDGKLRF-WDVKTK  323 (397)
T ss_dssp             S--SEEEEEETTSEEEE-EETTTT
T ss_pred             C--CEEEEEeCCCeEEE-EEcCCC
Confidence            9  78999999999998 998754

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=99.95  E-value=3.2e-26  Score=250.75  Aligned_cols=248  Identities=13%  Similarity=0.175  Sum_probs=192.0

Q ss_pred             ccccCCC------------cCeEEEEEcCCCCC--CEEEEEeCCCcEEEEEcCCCcee----------------------
Q psy7108          41 EVLSGHE------------GPVSCIEFSPVLSS--TGMVSASWDKTVKLWNAVETDTQ----------------------   84 (703)
Q Consensus        41 ~~l~gH~------------~~V~~l~~sp~~dg--~~L~sgs~Dg~V~iWd~~~~~~~----------------------   84 (703)
                      ..+.+|.            +.|++++|+|  ++  ..|++++.|++|++||+.++...                      
T Consensus        75 ~~~~~h~~~~~~~~~~~~~~~V~~l~~~~--~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  152 (447)
T 3dw8_B           75 STFQSHEPEFDYLKSLEIEEKINKIRWLP--QKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTL  152 (447)
T ss_dssp             EEEECCCCEEEGGGTEEECCCCCEEEECC--CCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSC
T ss_pred             cccccccccccccccccccCceEEEEEcC--CCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccce
Confidence            7889998            8999999999  87  79999999999999998764321                      


Q ss_pred             -----------------EE-EecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCC-CcEEEEEeccccCCCCCCCCccc
Q psy7108          85 -----------------HE-TIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVES-AAQVGSVEARRDLDSGRLDTDLV  145 (703)
Q Consensus        85 -----------------~~-~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~  145 (703)
                                       .. ...|...|.+++|+|++++|++| .|+.|++||+++ ++....+....            
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~------------  219 (447)
T 3dw8_B          153 RVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKP------------  219 (447)
T ss_dssp             CCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCC------------
T ss_pred             EeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeeccc------------
Confidence                             11 23588999999999999999998 799999999984 44444332111            


Q ss_pred             hhhcccCCccEEEEEEcCCC-CEEEEEecCCcEEEEECCCCce----EEEEEeccCC----ccccccccceeeeeccCCC
Q psy7108         146 TREQSLKAKAVSTVCYSADG-SCILAAGQSKYICIYSSREGIL----LKKFTITQNK----SLDGINDFINRRKMTEFGN  216 (703)
Q Consensus       146 ~~~~~~~~~~V~~i~~spdg-~~l~s~s~dg~I~lwD~~~~~~----~~~~~~~~~~----~~~~~~~~v~~~~~spdg~  216 (703)
                       .....|...|.+++|+|++ +.|++|+.|+.|++||+++++.    ...+..+...    ...++...|.+++|+|+|+
T Consensus       220 -~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~  298 (447)
T 3dw8_B          220 -ANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGR  298 (447)
T ss_dssp             -SSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSS
T ss_pred             -ccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCC
Confidence             0123456689999999998 9999999999999999999876    5666544321    1122334899999999999


Q ss_pred             EEEEEcccCCCCCeeEEECCCCCC-CccceeecCCccc---------------eEEEEEcCCCCEEEEEeCCC-EEEEEc
Q psy7108         217 VSLIETRETHEGGNVVLKLPGVKK-GDMAARVLKPEVR---------------VFCVKFSPTGQAWVAATTEG-VHIYSL  279 (703)
Q Consensus       217 ~l~~~~~~~~~~~~~~i~iwd~~~-~~~~~~~~~h~~~---------------V~~l~~spdg~~l~s~s~Dg-v~iwd~  279 (703)
                      ++++++. +      .|++||+++ ++++..+..|...               +..++|+|++++|++++.|| |++||+
T Consensus       299 ~l~~~~~-~------~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~  371 (447)
T 3dw8_B          299 YMMTRDY-L------SVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDR  371 (447)
T ss_dssp             EEEEEES-S------EEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEET
T ss_pred             EEEEeeC-C------eEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEc
Confidence            9988765 4      899999997 8888888887642               23499999999999999999 999999


Q ss_pred             CCCceec--------------------------------------ceeeeEEEccchhhhHhhcCCcceEEE
Q psy7108         280 DSGYVFD--------------------------------------PFLLDISITPQSVKEALADKDYAKALM  313 (703)
Q Consensus       280 ~~~~~~~--------------------------------------~~~~~~~~spd~~~~~l~sg~~~~~l~  313 (703)
                      .+++...                                      .....++|+|++  ..++.+..+....
T Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~--~~la~~~~~~~~~  441 (447)
T 3dw8_B          372 NTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKE--NIIAVATTNNLYI  441 (447)
T ss_dssp             TTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSS--SEEEEECSSCEEE
T ss_pred             CCCcceeeeecccccccccccCCccccccCCcccccccccccccCCceeEEEECCCC--CEEEEEecceeee
Confidence            9886532                                      012458999999  7777777665443

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=99.94  E-value=1.7e-25  Score=243.97  Aligned_cols=253  Identities=14%  Similarity=0.228  Sum_probs=208.6

Q ss_pred             ceeec-cCCCccccccc--cCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCC
Q psy7108          28 VKKGD-MAARVLKPEVL--SGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGT  104 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l--~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~  104 (703)
                      |++|| .+|+++  +.+  .+|...|++++|+|  +|++|++|+.||+|++||+.+++.+.....|...+.+++++  +.
T Consensus       127 V~lWd~~tg~~~--~~~~~~~~~~~V~sv~fsp--dg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~--~~  200 (420)
T 4gga_A          127 VYLWSASSGDIL--QLLQMEQPGEYISSVAWIK--EGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--SY  200 (420)
T ss_dssp             EEEEETTTCCEE--EEEECCSTTCCEEEEEECT--TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TT
T ss_pred             EEEEECCCCCEE--EEEEecCCCCcEEEEEECC--CCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeC--CC
Confidence            66676 478877  544  57888999999999  99999999999999999999998888888899999988775  67


Q ss_pred             EEEEEECCCeEEEEEcCCC-cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECC
Q psy7108         105 EIVVATLDGQLIMFDVESA-AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSR  183 (703)
Q Consensus       105 ~las~s~dg~I~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~  183 (703)
                      .+++|+.|+.+++||.... ..+..+.+|..                    .+..+.|+|+++++++++.|+.+++||..
T Consensus       201 ~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~--------------------~~~~~~~~~~g~~l~s~~~D~~v~i~~~~  260 (420)
T 4gga_A          201 ILSSGSRSGHIHHHDVRVAEHHVATLSGHSQ--------------------EVCGLRWAPDGRHLASGGNDNLVNVWPSA  260 (420)
T ss_dssp             EEEEEETTSEEEEEETTSSSCEEEEEECCSS--------------------CEEEEEECTTSSEEEEEETTSCEEEEESS
T ss_pred             EEEEEeCCCceeEeeecccceeeEEeccccc--------------------ceeeeeecCCCCeeeeeeccccceEEeec
Confidence            9999999999999999864 45566777655                    89999999999999999999999999998


Q ss_pred             CCce----EEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEE
Q psy7108         184 EGIL----LKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKF  259 (703)
Q Consensus       184 ~~~~----~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~  259 (703)
                      +++.    +....        .+...|.+++|+|++..+++.+...   .++.|++||+.++++...+..+ ..+.++.|
T Consensus       261 ~~~~~~~~~~~~~--------~~~~~V~~~~~~p~~~~~la~~~gs---~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~  328 (420)
T 4gga_A          261 PGEGGWVPLQTFT--------QHQGAVKAVAWCPWQSNVLATGGGT---SDRHIRIWNVCSGACLSAVDAH-SQVCSILW  328 (420)
T ss_dssp             CCSSCSCCSEEEC--------CCSSCEEEEEECTTCTTEEEEEECT---TTCEEEEEETTTTEEEEEEECS-SCEEEEEE
T ss_pred             cccccceeeeeec--------ccCCceeeeeeCCCcccEEEEEeec---CCCEEEEEeCCccccceeeccc-cceeeeee
Confidence            7653    22222        3445899999999887665543221   1248999999999887776654 56889999


Q ss_pred             cCCCCEEEEEe--CCC-EEEEEcCCCceecce------eeeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108         260 SPTGQAWVAAT--TEG-VHIYSLDSGYVFDPF------LLDISITPQSVKEALADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       260 spdg~~l~s~s--~Dg-v~iwd~~~~~~~~~~------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~  321 (703)
                      +|+++.+++++  .|+ |+|||+.+++.+..+      +.+++|+|++  ..|++++.|+++++ |++.+.
T Consensus       329 ~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg--~~l~S~s~D~tvri-Wdv~~~  396 (420)
T 4gga_A          329 SPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDG--ATVASAAADETLRL-WRCFEL  396 (420)
T ss_dssp             ETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTS--SCEEEEETTTEEEE-ECCSCS
T ss_pred             cCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCC--CEEEEEecCCeEEE-EECCCC
Confidence            99999998765  678 999999998876554      4679999999  88999999999999 998653

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=99.94  E-value=2e-25  Score=234.70  Aligned_cols=225  Identities=20%  Similarity=0.259  Sum_probs=174.8

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEc
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDV  120 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~  120 (703)
                      +.+.+|...|++++|+|  ++++|++|+.|+.|++|+............+...+....++++++.|++++.|+.+++||+
T Consensus        80 ~~l~~h~~~V~~~~~s~--dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~  157 (340)
T 4aow_A           80 RALRGHSHFVSDVVISS--DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT  157 (340)
T ss_dssp             EEECCCSSCEEEEEECT--TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECT
T ss_pred             EEEeCCCCCEEEEEECC--CCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEe
Confidence            67899999999999999  9999999999999999999888766666777788888888888888888888999999988


Q ss_pred             CCCcEEEE-EeccccCC------CCC------------------CCCccchhhcccCCccEEEEEEcCCCCEEEEEecCC
Q psy7108         121 ESAAQVGS-VEARRDLD------SGR------------------LDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSK  175 (703)
Q Consensus       121 ~~~~~~~~-~~~~~~~~------~~~------------------~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg  175 (703)
                      ........ ..+|....      ...                  ............|.+.|++++|+|++++|++|+.|+
T Consensus       158 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg  237 (340)
T 4aow_A          158 LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDG  237 (340)
T ss_dssp             TSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTC
T ss_pred             CCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCC
Confidence            65543221 11111100      000                  000111122345778999999999999999999999


Q ss_pred             cEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceee--------
Q psy7108         176 YICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARV--------  247 (703)
Q Consensus       176 ~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~--------  247 (703)
                      .|++||+++.+++..+..+         ..+.+++|+|++..++.+. +      ..|++||++++.....+        
T Consensus       238 ~i~iwd~~~~~~~~~~~~~---------~~v~~~~~~~~~~~~~~~~-d------~~i~iwd~~~~~~~~~~~~~~~~~~  301 (340)
T 4aow_A          238 QAMLWDLNEGKHLYTLDGG---------DIINALCFSPNRYWLCAAT-G------PSIKIWDLEGKIIVDELKQEVISTS  301 (340)
T ss_dssp             EEEEEETTTTEEEEEEECS---------SCEEEEEECSSSSEEEEEE-T------TEEEEEETTTTEEEEEECCC-----
T ss_pred             eEEEEEeccCceeeeecCC---------ceEEeeecCCCCceeeccC-C------CEEEEEECCCCeEEEeccccceeee
Confidence            9999999999988877632         3688999999987665543 3      27999999887654443        


Q ss_pred             -cCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCc
Q psy7108         248 -LKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGY  283 (703)
Q Consensus       248 -~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~  283 (703)
                       ..|...|++++|+|||++|++|+.|| |+||++.+|.
T Consensus       302 ~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt  339 (340)
T 4aow_A          302 SKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT  339 (340)
T ss_dssp             --CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred             ccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence             35788999999999999999999999 9999999885

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=99.94  E-value=6.6e-25  Score=232.86  Aligned_cols=243  Identities=15%  Similarity=0.220  Sum_probs=186.3

Q ss_pred             ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEE
Q psy7108          28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEI  106 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~l  106 (703)
                      +++|| .+++.+  ..+.+|.+.|++++|+|  ++++|++++.||.|++||+.+++...... +...|.+++|+|+++.+
T Consensus        56 i~vwd~~~~~~~--~~~~~h~~~v~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l  130 (369)
T 3zwl_B           56 ASVWYSLNGERL--GTLDGHTGTIWSIDVDC--FTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYF  130 (369)
T ss_dssp             EEEEETTTCCEE--EEECCCSSCEEEEEECT--TSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEE
T ss_pred             EEEEeCCCchhh--hhhhhcCCcEEEEEEcC--CCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEE
Confidence            77787 578888  89999999999999999  99999999999999999998886554443 77778888888877777


Q ss_pred             EEEECC-----CeEEEEEcCCCc-----------------------EEEEEecccc---CCCCC---------CCC-ccc
Q psy7108         107 VVATLD-----GQLIMFDVESAA-----------------------QVGSVEARRD---LDSGR---------LDT-DLV  145 (703)
Q Consensus       107 as~s~d-----g~I~vwd~~~~~-----------------------~~~~~~~~~~---~~~~~---------~~~-~~~  145 (703)
                      ++++.+     +.|++||++++.                       .+..+.-+.+   +..+.         ... ...
T Consensus       131 ~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~  210 (369)
T 3zwl_B          131 LAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEY  210 (369)
T ss_dssp             EEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEE
T ss_pred             EEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEe
Confidence            777777     777777775432                       1111111000   00000         000 111


Q ss_pred             hhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccC
Q psy7108         146 TREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRET  225 (703)
Q Consensus       146 ~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~  225 (703)
                      ......|...|.+++|+|++++|++++.|+.|++||+++++.+..+..         ...+..++|+|+++.+++++.++
T Consensus       211 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~---------~~~~~~~~~~~~~~~l~~~~~~~  281 (369)
T 3zwl_B          211 VDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYET---------DCPLNTAVITPLKEFIILGGGQE  281 (369)
T ss_dssp             EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC---------SSCEEEEEECSSSSEEEEEECCC
T ss_pred             EEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecC---------CCCceeEEecCCCceEEEeecCC
Confidence            122334667999999999999999999999999999999998888762         23788999999999999887654


Q ss_pred             C--------CCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCce
Q psy7108         226 H--------EGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYV  284 (703)
Q Consensus       226 ~--------~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~  284 (703)
                      .        ..+...+++||..+++....+.+|...|.+++|+|++++|++++.|| |++|+++.+..
T Consensus       282 ~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~  349 (369)
T 3zwl_B          282 AKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKSYF  349 (369)
T ss_dssp             -------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECHHHH
T ss_pred             CceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECccccc
Confidence            1        11223799999999999999999999999999999999999999999 99999986543

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=99.94  E-value=2.9e-26  Score=240.06  Aligned_cols=221  Identities=17%  Similarity=0.218  Sum_probs=171.9

Q ss_pred             ceeecc-CCC--ccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc--eeEEEecCCCcEEEEEEecC
Q psy7108          28 VKKGDM-AAR--VLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD--TQHETIQLLSDALCVAYKPD  102 (703)
Q Consensus        28 v~~~d~-tg~--~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~--~~~~~~~~~~~V~~v~~spd  102 (703)
                      +++||. +++  ++  ..+.+|.++|++++|+|..++++|+||+.|++|++||++++.  .......|...|.+++|+|+
T Consensus        37 v~lwd~~~~~~~~~--~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~  114 (316)
T 3bg1_A           37 VKIFDVRNGGQILI--ADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPH  114 (316)
T ss_dssp             EEEEEEETTEEEEE--EEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCT
T ss_pred             EEEEEecCCCcEEE--EEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCC
Confidence            555663 343  45  788999999999999861138999999999999999998763  34455679999999999998


Q ss_pred             --CCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC----------------
Q psy7108         103 --GTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD----------------  164 (703)
Q Consensus       103 --g~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd----------------  164 (703)
                        +.+|++|+.|++|++||++++.......                 ....|...|.+++|+|+                
T Consensus       115 ~~g~~lasgs~D~~i~lwd~~~~~~~~~~~-----------------~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~  177 (316)
T 3bg1_A          115 DYGLILACGSSDGAISLLTYTGEGQWEVKK-----------------INNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPN  177 (316)
T ss_dssp             TTCSCEEEECSSSCEEEEEECSSSCEEECC-----------------BTTSSSSCBCCCEECCCCCC------CCSCCCC
T ss_pred             CCCcEEEEEcCCCCEEEEecCCCCCcceee-----------------eeccccCCcceEEEccccCCccccccccccCcc
Confidence              7899999999999999998763221111                 01224457888999987                


Q ss_pred             -CCEEEEEecCCcEEEEECCCCc---eEEEEEeccCCccccccccceeeeeccCC----CEEEEEcccCCCCCeeEEECC
Q psy7108         165 -GSCILAAGQSKYICIYSSREGI---LLKKFTITQNKSLDGINDFINRRKMTEFG----NVSLIETRETHEGGNVVLKLP  236 (703)
Q Consensus       165 -g~~l~s~s~dg~I~lwD~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~spdg----~~l~~~~~~~~~~~~~~i~iw  236 (703)
                       +++|++|+.|++|++||++...   +...        +.+|...|.+++|+|++    +.+++++.++      .|++|
T Consensus       178 ~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~--------l~~h~~~V~~v~~sp~~~~~~~~las~s~D~------~v~iw  243 (316)
T 3bg1_A          178 YIKRFASGGCDNLIKLWKEEEDGQWKEEQK--------LEAHSDWVRDVAWAPSIGLPTSTIASCSQDG------RVFIW  243 (316)
T ss_dssp             CCCBEECCBTTSBCCEEEECTTSCEEEEEC--------CBCCSSCEEEEECCCCSSCSCCEEEEEETTC------EEEEE
T ss_pred             ccceEEEecCCCeEEEEEeCCCCccceeee--------cccCCCceEEEEecCCCCCCCceEEEEcCCC------eEEEE
Confidence             4789999999999999997653   3333        34566699999999997    6777777653      89999


Q ss_pred             CCCCCc----cceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCC
Q psy7108         237 GVKKGD----MAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDS  281 (703)
Q Consensus       237 d~~~~~----~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~  281 (703)
                      |+.+..    ....+..|...|.+++|+|++++|++++.|+ |++|+...
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~  293 (316)
T 3bg1_A          244 TCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESV  293 (316)
T ss_dssp             ECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECT
T ss_pred             EccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECC
Confidence            987631    2234556888999999999999999999999 99999763

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=99.94  E-value=1.5e-25  Score=239.67  Aligned_cols=196  Identities=17%  Similarity=0.205  Sum_probs=159.6

Q ss_pred             CcEEEEEEecCCCEEEEEE--CCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEE
Q psy7108          92 SDALCVAYKPDGTEIVVAT--LDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCIL  169 (703)
Q Consensus        92 ~~V~~v~~spdg~~las~s--~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~  169 (703)
                      ..+.+++|||||+++++++  .|++|++||+++++.+..+..+.                     .|.+++|+|||++++
T Consensus       134 ~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~---------------------~V~~v~fspdg~~l~  192 (365)
T 4h5i_A          134 DYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRG---------------------EVKDLHFSTDGKVVA  192 (365)
T ss_dssp             CCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSS---------------------CCCEEEECTTSSEEE
T ss_pred             cCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCC---------------------ceEEEEEccCCceEE
Confidence            4588999999999987654  68999999999999988876432                     689999999999999


Q ss_pred             EEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcc----ce
Q psy7108         170 AAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDM----AA  245 (703)
Q Consensus       170 s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~----~~  245 (703)
                      +++. +.+++|+..++..+....      ..++...+.+++|+|+++.+++++.++.  ....+++|+...+..    ..
T Consensus       193 s~s~-~~~~~~~~~~~~~~~~~~------~~~~~~~v~~v~fspdg~~l~~~s~d~~--~~~~i~~~~~~~~~~~~~~~~  263 (365)
T 4h5i_A          193 YITG-SSLEVISTVTGSCIARKT------DFDKNWSLSKINFIADDTVLIAASLKKG--KGIVLTKISIKSGNTSVLRSK  263 (365)
T ss_dssp             EECS-SCEEEEETTTCCEEEEEC------CCCTTEEEEEEEEEETTEEEEEEEESSS--CCEEEEEEEEETTEEEEEEEE
T ss_pred             eccc-eeEEEEEeccCcceeeee------cCCCCCCEEEEEEcCCCCEEEEEecCCc--ceeEEeecccccceecceeee
Confidence            9885 567778877777654432      2235568999999999999998876542  224788888776543    34


Q ss_pred             eecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecce-------eeeEEEccchhhhHhhcCCcceEEEEEEe
Q psy7108         246 RVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPF-------LLDISITPQSVKEALADKDYAKALMMSLK  317 (703)
Q Consensus       246 ~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~-------~~~~~~spd~~~~~l~sg~~~~~l~la~~  317 (703)
                      .+.+|...|++++|||||++||+|+.|+ |+|||+.+++++..+       +.+++|+||+  .+|++++.|+++++ |+
T Consensus       264 ~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg--~~laS~S~D~tvrv-w~  340 (365)
T 4h5i_A          264 QVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDS--TYVASVSAANTIHI-IK  340 (365)
T ss_dssp             EEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTS--CEEEEEETTSEEEE-EE
T ss_pred             eecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCC--CEEEEEeCCCeEEE-EE
Confidence            5668899999999999999999999999 999999998875443       4689999999  89999999999999 99


Q ss_pred             cCc
Q psy7108         318 LNE  320 (703)
Q Consensus       318 l~~  320 (703)
                      +..
T Consensus       341 ip~  343 (365)
T 4h5i_A          341 LPL  343 (365)
T ss_dssp             CCT
T ss_pred             cCC
Confidence            853

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=99.94  E-value=3e-25  Score=236.66  Aligned_cols=224  Identities=14%  Similarity=0.246  Sum_probs=181.5

Q ss_pred             ceeecc---CCCccccccccCCCcCeEEEEEcCCCC--CCEEEEEeCCCcEEEEEcCCCc--eeEEEecCCCcEEEEEEe
Q psy7108          28 VKKGDM---AARVLKPEVLSGHEGPVSCIEFSPVLS--STGMVSASWDKTVKLWNAVETD--TQHETIQLLSDALCVAYK  100 (703)
Q Consensus        28 v~~~d~---tg~~~~~~~l~gH~~~V~~l~~sp~~d--g~~L~sgs~Dg~V~iWd~~~~~--~~~~~~~~~~~V~~v~~s  100 (703)
                      +++|+.   +++++  ..+.+|.++|++++|+|  +  +++|++|+.||.|++||+.++.  .......|...|.+++|+
T Consensus        35 i~iw~~~~~~~~~~--~~~~~h~~~v~~~~~~~--~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~  110 (379)
T 3jrp_A           35 IKIFEVEGETHKLI--DTLTGHEGPVWRVDWAH--PKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWA  110 (379)
T ss_dssp             EEEEEEETTEEEEE--EEECCCSSCEEEEEECC--GGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEEC
T ss_pred             EEEEecCCCcceee--eEecCCCCcEEEEEeCC--CCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeC
Confidence            666764   45566  78899999999999998  6  8999999999999999998876  455556689999999999


Q ss_pred             cC--CCEEEEEECCCeEEEEEcCCCcE--EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC-------------
Q psy7108         101 PD--GTEIVVATLDGQLIMFDVESAAQ--VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA-------------  163 (703)
Q Consensus       101 pd--g~~las~s~dg~I~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp-------------  163 (703)
                      |+  +..+++++.|+.|++||++++..  ...+..|.                    ..|.+++|+|             
T Consensus       111 ~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~--------------------~~v~~~~~~~~~~~~~~~~~~~~  170 (379)
T 3jrp_A          111 PHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHA--------------------IGVNSASWAPATIEEDGEHNGTK  170 (379)
T ss_dssp             CGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCT--------------------TCEEEEEECCCC----------C
T ss_pred             CCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCC--------------------CceEEEEEcCccccccccccCCC
Confidence            99  99999999999999999988733  33444443                    3899999999             


Q ss_pred             CCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccC---CCEEEEEcccCCCCCeeEEECCCCCC
Q psy7108         164 DGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEF---GNVSLIETRETHEGGNVVLKLPGVKK  240 (703)
Q Consensus       164 dg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spd---g~~l~~~~~~~~~~~~~~i~iwd~~~  240 (703)
                      ++..+++++.|+.|++||++++........    .+.+|...|.+++|+|+   ++.+++++.++      .|++||+++
T Consensus       171 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~----~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg------~i~iwd~~~  240 (379)
T 3jrp_A          171 ESRKFVTGGADNLVKIWKYNSDAQTYVLES----TLEGHSDWVRDVAWSPTVLLRSYLASVSQDR------TCIIWTQDN  240 (379)
T ss_dssp             TTCEEEEEETTSCEEEEEEETTTTEEEEEE----EECCCSSCEEEEEECCCCSSSEEEEEEETTS------CEEEEEESS
T ss_pred             CCCEEEEEeCCCeEEEEEecCCCcceeeEE----EEecccCcEeEEEECCCCCCCCeEEEEeCCC------EEEEEeCCC
Confidence            699999999999999999987654322211    12245568999999999   78888877664      799999988


Q ss_pred             Cc-----cceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCcee
Q psy7108         241 GD-----MAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVF  285 (703)
Q Consensus       241 ~~-----~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~  285 (703)
                      ++     .......|...|.+++|+|+|++|++++.|| |++|++..+...
T Consensus       241 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~  291 (379)
T 3jrp_A          241 EQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKW  291 (379)
T ss_dssp             TTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETTEE
T ss_pred             CCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCCcc
Confidence            64     2222334888999999999999999999999 999999865443

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=99.94  E-value=7.1e-26  Score=240.32  Aligned_cols=243  Identities=13%  Similarity=0.156  Sum_probs=200.5

Q ss_pred             cccCCCcCeEEEEEcCCCC----CCEEEEEeCCCcEEEEEcCCCceeEEEec-----CCCcEEEEEEecC----CCEEEE
Q psy7108          42 VLSGHEGPVSCIEFSPVLS----STGMVSASWDKTVKLWNAVETDTQHETIQ-----LLSDALCVAYKPD----GTEIVV  108 (703)
Q Consensus        42 ~l~gH~~~V~~l~~sp~~d----g~~L~sgs~Dg~V~iWd~~~~~~~~~~~~-----~~~~V~~v~~spd----g~~las  108 (703)
                      ...+|.++|++++|+|  +    ...+++++.++.|++||+.+++....+..     |...|.+++|+|+    +++|++
T Consensus        13 ~~~~h~~~v~~i~~~p--~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~   90 (366)
T 3k26_A           13 LKEDHNQPLFGVQFNW--HSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAV   90 (366)
T ss_dssp             EECTTCSCEEEEEECT--TCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEE
T ss_pred             eecCCCCceEEEEEec--ccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEE
Confidence            4568999999999998  4    44566666677999999987765544443     5578999999999    679999


Q ss_pred             EECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC-CCCEEEEEecCCcEEEEECCCCce
Q psy7108         109 ATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA-DGSCILAAGQSKYICIYSSREGIL  187 (703)
Q Consensus       109 ~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp-dg~~l~s~s~dg~I~lwD~~~~~~  187 (703)
                      |+.||.|++||+.+++.+..+.+|..                    .|.+++|+| ++++|++++.|+.|++||+++++.
T Consensus        91 ~~~dg~i~v~d~~~~~~~~~~~~~~~--------------------~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~  150 (366)
T 3k26_A           91 AGSRGIIRIINPITMQCIKHYVGHGN--------------------AINELKFHPRDPNLLLSVSKDHALRLWNIQTDTL  150 (366)
T ss_dssp             EETTCEEEEECTTTCCEEEEEESCCS--------------------CEEEEEECSSCTTEEEEEETTSCEEEEETTTTEE
T ss_pred             ecCCCEEEEEEchhceEeeeecCCCC--------------------cEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeE
Confidence            99999999999999999998887765                    899999999 999999999999999999999988


Q ss_pred             EEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC------------------
Q psy7108         188 LKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK------------------  249 (703)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~------------------  249 (703)
                      +..+..     ..++...|.+++|+|+++.+++++.++      .|++||+++++....+..                  
T Consensus       151 ~~~~~~-----~~~~~~~v~~~~~~~~~~~l~~~~~dg------~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (366)
T 3k26_A          151 VAIFGG-----VEGHRDEVLSADYDLLGEKIMSCGMDH------SLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKI  219 (366)
T ss_dssp             EEEECS-----TTSCSSCEEEEEECTTSSEEEEEETTS------CEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEE
T ss_pred             EEEecc-----cccccCceeEEEECCCCCEEEEecCCC------CEEEEECCCCccccccceeEEecCCCCcccccceee
Confidence            877632     123556899999999999999888764      899999998765544332                  


Q ss_pred             ----------CccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCce--------------ecc------eeeeEEEccc-
Q psy7108         250 ----------PEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYV--------------FDP------FLLDISITPQ-  297 (703)
Q Consensus       250 ----------h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~--------------~~~------~~~~~~~spd-  297 (703)
                                |...|.+++|+  ++++++++.|+ |++||+.++..              ...      ....++|+|+ 
T Consensus       220 ~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~  297 (366)
T 3k26_A          220 HFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDF  297 (366)
T ss_dssp             CCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECT
T ss_pred             ccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCC
Confidence                      88999999999  77999999999 99999987644              111      1245788888 


Q ss_pred             -hhhhHhhcCCcceEEEEEEecCchh
Q psy7108         298 -SVKEALADKDYAKALMMSLKLNEQG  322 (703)
Q Consensus       298 -~~~~~l~sg~~~~~l~la~~l~~~~  322 (703)
                       +  .++++++.++.+.+ |++....
T Consensus       298 ~~--~~l~~~~~dg~i~v-wd~~~~~  320 (366)
T 3k26_A          298 WQ--KMLALGNQVGKLYV-WDLEVED  320 (366)
T ss_dssp             TS--SEEEEECTTSCEEE-EECCSSS
T ss_pred             CC--cEEEEEecCCcEEE-EECCCCC
Confidence             7  88999999999998 9987653

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=99.94  E-value=5.7e-26  Score=266.31  Aligned_cols=243  Identities=15%  Similarity=0.157  Sum_probs=199.5

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCC--ceeEEEecCCCcEEEEEEecC--CCEEEEEECCCeEE
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVET--DTQHETIQLLSDALCVAYKPD--GTEIVVATLDGQLI  116 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~--~~~~~~~~~~~~V~~v~~spd--g~~las~s~dg~I~  116 (703)
                      .++.+|.++|++++|+|  ++++|++|+.||+|++||+.++  ........|.+.|.+++|+|+  ++.|++|+.||.|+
T Consensus         3 ~~l~gH~~~V~~l~~s~--dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~   80 (753)
T 3jro_A            3 VIANAHNELIHDAVLDY--YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVL   80 (753)
T ss_dssp             -----CCCCEEEECCCS--SSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEE
T ss_pred             eecccCcceeEEEEECC--CCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEE
Confidence            67899999999999999  9999999999999999999743  344556679999999999998  99999999999999


Q ss_pred             EEEcCCCc--EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC--CCEEEEEecCCcEEEEECCCCceEEEEE
Q psy7108         117 MFDVESAA--QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD--GSCILAAGQSKYICIYSSREGILLKKFT  192 (703)
Q Consensus       117 vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd--g~~l~s~s~dg~I~lwD~~~~~~~~~~~  192 (703)
                      +||+++++  ....+.+|..                    .|++++|+|+  ++.+++|+.||.|++||++++.......
T Consensus        81 vwd~~~~~~~~~~~~~~h~~--------------------~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~  140 (753)
T 3jro_A           81 IWKEENGRWSQIAVHAVHSA--------------------SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPII  140 (753)
T ss_dssp             EEEEETTEEEEEEEECCCSS--------------------CEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEE
T ss_pred             EEECCCCcccccccccCCCC--------------------CeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeE
Confidence            99999886  5555555544                    8999999999  9999999999999999999874322221


Q ss_pred             eccCCccccccccceeeeecc-------------CCCEEEEEcccCCCCCeeEEECCCCCCC----ccceeecCCccceE
Q psy7108         193 ITQNKSLDGINDFINRRKMTE-------------FGNVSLIETRETHEGGNVVLKLPGVKKG----DMAARVLKPEVRVF  255 (703)
Q Consensus       193 ~~~~~~~~~~~~~v~~~~~sp-------------dg~~l~~~~~~~~~~~~~~i~iwd~~~~----~~~~~~~~h~~~V~  255 (703)
                            ..++...|.+++|+|             ++..+++++.++      .|++||++++    .....+.+|...|.
T Consensus       141 ------~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg------~I~iwd~~~~~~~~~~~~~~~~h~~~V~  208 (753)
T 3jro_A          141 ------IDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN------LVKIWKYNSDAQTYVLESTLEGHSDWVR  208 (753)
T ss_dssp             ------EECCSSCEEEEEECCCC---------CGGGCCEEEEETTS------CEEEEEEETTTTEEEEEEEECCCSSCEE
T ss_pred             ------eecCCCceEEEEecCcccccccccccCCCCCEEEEEECCC------eEEEEeccCCcccceeeeeecCCCCcEE
Confidence                  123445899999999             588888888764      7999999877    44556778999999


Q ss_pred             EEEEcCC---CCEEEEEeCCC-EEEEEcCCCce-----------ecceeeeEEEccchhhhHhhcCCcceEEEEEEecCc
Q psy7108         256 CVKFSPT---GQAWVAATTEG-VHIYSLDSGYV-----------FDPFLLDISITPQSVKEALADKDYAKALMMSLKLNE  320 (703)
Q Consensus       256 ~l~~spd---g~~l~s~s~Dg-v~iwd~~~~~~-----------~~~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~  320 (703)
                      +++|+|+   ++++++++.|| |++||+.++..           +.....+++|+|++  ..+++++.++.+.+ |+++.
T Consensus       209 ~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg--~~l~s~s~Dg~I~v-wd~~~  285 (753)
T 3jro_A          209 DVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSG--NVLALSGGDNKVTL-WKENL  285 (753)
T ss_dssp             EEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTT--CCEEEECSSSCEEC-CBCCS
T ss_pred             EEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCC--CEEEEEcCCCEEEE-EecCC
Confidence            9999999   89999999999 99999988631           12234678999999  88999999999998 98874

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=99.94  E-value=1.9e-25  Score=238.88  Aligned_cols=206  Identities=15%  Similarity=0.153  Sum_probs=165.1

Q ss_pred             CCCcCeEEEEEcCCCCCCEEEEE--eCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCC
Q psy7108          45 GHEGPVSCIEFSPVLSSTGMVSA--SWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVES  122 (703)
Q Consensus        45 gH~~~V~~l~~sp~~dg~~L~sg--s~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~  122 (703)
                      .+...+.+++|+|  ||++++++  +.|++|+|||+.+++.... ..|.+.|.+++|+|||+++++++. +.+.+|+..+
T Consensus       131 ~~~~~~~~v~fSp--Dg~~la~as~~~d~~i~iwd~~~~~~~~~-~~~~~~V~~v~fspdg~~l~s~s~-~~~~~~~~~~  206 (365)
T 4h5i_A          131 NADDYTKLVYISR--EGTVAAIASSKVPAIMRIIDPSDLTEKFE-IETRGEVKDLHFSTDGKVVAYITG-SSLEVISTVT  206 (365)
T ss_dssp             CTTCCEEEEEECT--TSSCEEEEESCSSCEEEEEETTTTEEEEE-EECSSCCCEEEECTTSSEEEEECS-SCEEEEETTT
T ss_pred             CcccCEEEEEEcC--CCCEEEEEECCCCCEEEEeECCCCcEEEE-eCCCCceEEEEEccCCceEEeccc-eeEEEEEecc
Confidence            4556799999999  99998755  4789999999998865544 468889999999999999999975 5677777777


Q ss_pred             CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCC----cEEEEECCCCceEEEEEeccCCc
Q psy7108         123 AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSK----YICIYSSREGILLKKFTITQNKS  198 (703)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg----~I~lwD~~~~~~~~~~~~~~~~~  198 (703)
                      ++........                  .|...|.+++|+|+++.+++++.|+    .+++||+..........    ..
T Consensus       207 ~~~~~~~~~~------------------~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~----~~  264 (365)
T 4h5i_A          207 GSCIARKTDF------------------DKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRS----KQ  264 (365)
T ss_dssp             CCEEEEECCC------------------CTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEE----EE
T ss_pred             CcceeeeecC------------------CCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceee----ee
Confidence            7665433221                  1334799999999999999998887    68899988765422111    11


Q ss_pred             cccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceee-cCCccceEEEEEcCCCCEEEEEeCCC-EEE
Q psy7108         199 LDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARV-LKPEVRVFCVKFSPTGQAWVAATTEG-VHI  276 (703)
Q Consensus       199 ~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~-~~h~~~V~~l~~spdg~~l~s~s~Dg-v~i  276 (703)
                      +.++...|++++|+|+|+++++++.++      .|++||+++++++..+ .+|...|++++|||||++||+++.|+ |+|
T Consensus       265 ~~~~~~~V~~~~~Spdg~~lasgs~D~------~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrv  338 (365)
T 4h5i_A          265 VTNRFKGITSMDVDMKGELAVLASNDN------SIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHI  338 (365)
T ss_dssp             EESSCSCEEEEEECTTSCEEEEEETTS------CEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEE
T ss_pred             ecCCCCCeEeEEECCCCCceEEEcCCC------EEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEE
Confidence            223455899999999999999988764      8999999999988775 68999999999999999999999999 999


Q ss_pred             EEcCCC
Q psy7108         277 YSLDSG  282 (703)
Q Consensus       277 wd~~~~  282 (703)
                      |+++..
T Consensus       339 w~ip~~  344 (365)
T 4h5i_A          339 IKLPLN  344 (365)
T ss_dssp             EECCTT
T ss_pred             EEcCCC
Confidence            999654

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=99.94  E-value=1.5e-24  Score=247.35  Aligned_cols=257  Identities=11%  Similarity=0.140  Sum_probs=212.9

Q ss_pred             ceeeccCCCccccccccCCCcCeEEEEEcCCCCCC-EEEEEeCCCcEEEEEcCCCceeEEEecCCC---cEEEEEEecC-
Q psy7108          28 VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSST-GMVSASWDKTVKLWNAVETDTQHETIQLLS---DALCVAYKPD-  102 (703)
Q Consensus        28 v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~-~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~---~V~~v~~spd-  102 (703)
                      +..|| +++.+  ..+.+|.+.|++++|+|  +++ .+++++.|+.|++||+.+++....+..|..   .|.+++|+|+ 
T Consensus       144 v~~~d-~~~~~--~~~~~~~~~v~~~~~~~--~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  218 (615)
T 1pgu_A          144 FISWD-SGNSL--GEVSGHSQRINACHLKQ--SRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDS  218 (615)
T ss_dssp             EEETT-TCCEE--EECCSCSSCEEEEEECS--SSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTT
T ss_pred             EEEEE-CCCcc--eeeecCCccEEEEEECC--CCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCC
Confidence            44566 66777  88999999999999999  887 899999999999999988877777777888   9999999999 


Q ss_pred             CCEEEEEECCCeEEEEEcCCCcEEEEE-e---ccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEE
Q psy7108         103 GTEIVVATLDGQLIMFDVESAAQVGSV-E---ARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYIC  178 (703)
Q Consensus       103 g~~las~s~dg~I~vwd~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~  178 (703)
                      +++|++++.|+.|++||+++++.+..+ .   .|.                    ..|.+++|+ ++++|++++.|+.|+
T Consensus       219 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~--------------------~~v~~~~~~-~~~~l~~~~~d~~i~  277 (615)
T 1pgu_A          219 GEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQ--------------------GGIFALSWL-DSQKFATVGADATIR  277 (615)
T ss_dssp             CCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCC--------------------SCEEEEEES-SSSEEEEEETTSEEE
T ss_pred             CCEEEEEeCCCeEEEEECCCCCEeEEecccccccC--------------------CceEEEEEc-CCCEEEEEcCCCcEE
Confidence            999999999999999999999988887 4   443                    378888888 888888888888888


Q ss_pred             EEECCCCceEEEEEecc---------------------------------------------------------------
Q psy7108         179 IYSSREGILLKKFTITQ---------------------------------------------------------------  195 (703)
Q Consensus       179 lwD~~~~~~~~~~~~~~---------------------------------------------------------------  195 (703)
                      +||+++++.+..+..+.                                                               
T Consensus       278 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg  357 (615)
T 1pgu_A          278 VWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDG  357 (615)
T ss_dssp             EEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTS
T ss_pred             EEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCC
Confidence            88887665544433220                                                               


Q ss_pred             --------------------------------------------------------------------------------
Q psy7108         196 --------------------------------------------------------------------------------  195 (703)
Q Consensus       196 --------------------------------------------------------------------------------  195 (703)
                                                                                                      
T Consensus       358 ~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~  437 (615)
T 1pgu_A          358 RIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTG  437 (615)
T ss_dssp             CEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTC
T ss_pred             eEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCC
Confidence                                                                                            


Q ss_pred             -----------------------------C--------------CccccccccceeeeeccCCCEEEEEcccCCCCCeeE
Q psy7108         196 -----------------------------N--------------KSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVV  232 (703)
Q Consensus       196 -----------------------------~--------------~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~  232 (703)
                                                   +              ....++...|.+++|+|+|+++++++.++      .
T Consensus       438 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg------~  511 (615)
T 1pgu_A          438 DIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMG------K  511 (615)
T ss_dssp             CEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTS------C
T ss_pred             ceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCC------e
Confidence                                         0              11223456788899999999998887764      7


Q ss_pred             EECCCCCCCccceeecC-CccceEEEEEcC----------CCCEEEEEeCCC-EEEEEcCCC-ceec------ceeeeEE
Q psy7108         233 LKLPGVKKGDMAARVLK-PEVRVFCVKFSP----------TGQAWVAATTEG-VHIYSLDSG-YVFD------PFLLDIS  293 (703)
Q Consensus       233 i~iwd~~~~~~~~~~~~-h~~~V~~l~~sp----------dg~~l~s~s~Dg-v~iwd~~~~-~~~~------~~~~~~~  293 (703)
                      |++||+.+++.+..+.+ |...|++++|+|          ++++|++++.|+ |++|++.++ +...      ....+++
T Consensus       512 i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~  591 (615)
T 1pgu_A          512 ILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLL  591 (615)
T ss_dssp             EEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEE
T ss_pred             EEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEE
Confidence            99999999998888887 999999999999          999999999999 999999987 4433      2347799


Q ss_pred             EccchhhhHhhcCCcceEEEEEEecCc
Q psy7108         294 ITPQSVKEALADKDYAKALMMSLKLNE  320 (703)
Q Consensus       294 ~spd~~~~~l~sg~~~~~l~la~~l~~  320 (703)
                      |+|++  . +++++.++.+++ |+++.
T Consensus       592 ~s~~~--~-l~s~~~d~~v~i-w~~~~  614 (615)
T 1pgu_A          592 WETPS--T-LVSSGADACIKR-WNVVL  614 (615)
T ss_dssp             EEETT--E-EEEEETTSCEEE-EEEC-
T ss_pred             EcCCC--C-eEEecCCceEEE-Eeeec
Confidence            99999  6 899999999998 98763

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=99.94  E-value=4.5e-26  Score=246.28  Aligned_cols=256  Identities=16%  Similarity=0.141  Sum_probs=169.2

Q ss_pred             cCCceEEecCCceeecc-CCCccccccccCCCcCeEEEEEcCC------CCCCEEEEEeCCCcEEEEEcCCCceeEEEec
Q psy7108          17 EGGNVVLKLPGVKKGDM-AARVLKPEVLSGHEGPVSCIEFSPV------LSSTGMVSASWDKTVKLWNAVETDTQHETIQ   89 (703)
Q Consensus        17 ~~~~~~i~~~~v~~~d~-tg~~~~~~~l~gH~~~V~~l~~sp~------~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~   89 (703)
                      .+.+..+++|+.+.... ....+  ..+.||.+.|++++|+|.      .|+++|||||.|++|+|||+.++.+......
T Consensus       107 ~~~d~~v~lw~~~~~~~~~~~~~--~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~  184 (393)
T 4gq1_A          107 VCQDNTVRLIITKNETIITQHVL--GGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYP  184 (393)
T ss_dssp             EETTSCEEEEEEETTEEEEEEEE--CTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEE
T ss_pred             EeCCCcEEEEECCCCccceeeee--cccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecC
Confidence            33444555555442211 11233  578999999999999861      1578999999999999999988888888889


Q ss_pred             CCCcEEEEEEecCCC-EEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCC-----CCCccchhhcccCCccEEEEEEc-
Q psy7108          90 LLSDALCVAYKPDGT-EIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGR-----LDTDLVTREQSLKAKAVSTVCYS-  162 (703)
Q Consensus        90 ~~~~V~~v~~spdg~-~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~V~~i~~s-  162 (703)
                      |.+.|.+++|+|++. +|++++.|++|++||+++++.......+.......     ............|...+.++.|+ 
T Consensus       185 ~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~  264 (393)
T 4gq1_A          185 LSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIG  264 (393)
T ss_dssp             CSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEET
T ss_pred             CCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeec
Confidence            999999999999885 79999999999999999987765554433211110     00011112234567788999986 


Q ss_pred             CCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCc-----------cccccccceeeeecc-CCCEEEEEcccCCCCCe
Q psy7108         163 ADGSCILAAGQSKYICIYSSREGILLKKFTITQNKS-----------LDGINDFINRRKMTE-FGNVSLIETRETHEGGN  230 (703)
Q Consensus       163 pdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~-----------~~~~~~~v~~~~~sp-dg~~l~~~~~~~~~~~~  230 (703)
                      ||++.|++++.|+++++||+.++.....+..+....           .... .......++| .+..++++++.+     
T Consensus       265 ~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~sgs~D-----  338 (393)
T 4gq1_A          265 SDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLF-PSLLGACPHPRYMDYFATAHSQH-----  338 (393)
T ss_dssp             TTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSS-CCSSCCEECSSCTTEEEEEETTT-----
T ss_pred             CCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEcccccccccc-CcceeEEEccCCCCEEEEEECCC-----
Confidence            799999999999999999999877665554332210           0011 1222233443 344444444322     


Q ss_pred             eEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCCEEEEEcC
Q psy7108         231 VVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYSLD  280 (703)
Q Consensus       231 ~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dgv~iwd~~  280 (703)
                      ..|++||..+++.......|...|.+++|||||++||+++.+|+.+|.+.
T Consensus       339 g~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~Gv~lvrL~  388 (393)
T 4gq1_A          339 GLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGSVLLTRLM  388 (393)
T ss_dssp             TEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSEEEEEEEG
T ss_pred             CEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEe
Confidence            38999999999988888889999999999999999999999998888764

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=99.94  E-value=1.2e-25  Score=236.01  Aligned_cols=239  Identities=15%  Similarity=0.221  Sum_probs=185.2

Q ss_pred             ceeeccC-C----CccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc---------eeEEEecCCCc
Q psy7108          28 VKKGDMA-A----RVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD---------TQHETIQLLSD   93 (703)
Q Consensus        28 v~~~d~t-g----~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~---------~~~~~~~~~~~   93 (703)
                      +++|+.. +    ++.  ..+.+|.++|++++|+|..++++|++|+.||+|++||+.++.         .......|...
T Consensus        35 i~iw~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~  112 (351)
T 3f3f_A           35 IKVFKLDKDTSNWELS--DSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGS  112 (351)
T ss_dssp             EEEEEECSSSCCEEEE--EEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSC
T ss_pred             EEEEECCCCCCcceec--ceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCc
Confidence            5556533 2    355  778899999999999982128999999999999999998763         35556679999


Q ss_pred             EEEEEEecC--CCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC---CCEE
Q psy7108          94 ALCVAYKPD--GTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD---GSCI  168 (703)
Q Consensus        94 V~~v~~spd--g~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd---g~~l  168 (703)
                      |.+++|+|+  ++++++++.|+.|++||+++++.+..+......       .........+...+.+++|+|+   +..+
T Consensus       113 v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~p~~~~~~~l  185 (351)
T 3f3f_A          113 LYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEM-------KVLSIPPANHLQSDFCLSWCPSRFSPEKL  185 (351)
T ss_dssp             EEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEE-------ESCSCCCSSCSCCCEEEEECCCSSSCCEE
T ss_pred             eeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccc-------cccccccCCcccceeEEEeccCCCCCcEE
Confidence            999999999  999999999999999999887654333221110       0011112245668999999997   9999


Q ss_pred             EEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCC----CEEEEEcccCCCCCeeEEECCCCCCC---
Q psy7108         169 LAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFG----NVSLIETRETHEGGNVVLKLPGVKKG---  241 (703)
Q Consensus       169 ~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg----~~l~~~~~~~~~~~~~~i~iwd~~~~---  241 (703)
                      ++++.|+.+.+|+...++......      ..+|...|.+++|+|++    +.+++++.++      .|++||++++   
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg------~i~iwd~~~~~~~  253 (351)
T 3f3f_A          186 AVSALEQAIIYQRGKDGKLHVAAK------LPGHKSLIRSISWAPSIGRWYQLIATGCKDG------RIRIFKITEKLSP  253 (351)
T ss_dssp             EEEETTEEEEEEECTTSCEEEEEE------CCCCCSCEEEEEECCCSSCSSEEEEEEETTS------CEEEEEEEECC--
T ss_pred             EEecCCCcEEEEccCCCceeeeee------cCCCCcceeEEEECCCCCCcceEEEEEcCCC------eEEEEeCCCCcCc
Confidence            999999999888888776532222      23455689999999998    6777777653      7999998864   


Q ss_pred             -------------------------------------------ccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEE
Q psy7108         242 -------------------------------------------DMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIY  277 (703)
Q Consensus       242 -------------------------------------------~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iw  277 (703)
                                                                 +.+..+.+|...|++++|+|++++|++++.|| |++|
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw  333 (351)
T 3f3f_A          254 LASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLW  333 (351)
T ss_dssp             -------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEE
T ss_pred             cccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEE
Confidence                                                       45566678999999999999999999999999 9999


Q ss_pred             EcCCCceecc
Q psy7108         278 SLDSGYVFDP  287 (703)
Q Consensus       278 d~~~~~~~~~  287 (703)
                      ++.+++....
T Consensus       334 ~~~~~~~~~~  343 (351)
T 3f3f_A          334 KATYSNEFKC  343 (351)
T ss_dssp             EECTTSCEEE
T ss_pred             ecCcCcchhh
Confidence            9998766543

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=99.94  E-value=1e-25  Score=246.48  Aligned_cols=205  Identities=14%  Similarity=0.175  Sum_probs=168.5

Q ss_pred             CCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcC---CCceeEEEe----------c--CCCcEEEEE--EecCCCEEE
Q psy7108          45 GHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAV---ETDTQHETI----------Q--LLSDALCVA--YKPDGTEIV  107 (703)
Q Consensus        45 gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~---~~~~~~~~~----------~--~~~~V~~v~--~spdg~~la  107 (703)
                      +|.++|++++|+|  ++++|++|+.||+|++||+.   +++......          .  +...+.++.  +++++..|+
T Consensus       109 ~h~~~v~~~~~~~--~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  186 (437)
T 3gre_A          109 DCSSTVTQITMIP--NFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLV  186 (437)
T ss_dssp             ECSSCEEEEEECT--TSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEE
T ss_pred             cCCCCEEEEEEeC--CCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEE
Confidence            6999999999999  99999999999999999994   443222111          1  456677777  568899999


Q ss_pred             EEECCCeEEEEEcCCCcEEEEEec--cccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCC
Q psy7108         108 VATLDGQLIMFDVESAAQVGSVEA--RRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREG  185 (703)
Q Consensus       108 s~s~dg~I~vwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~  185 (703)
                      +++.|+.|++||+++++.+..+.+  |..                    .|++++|+|++++|++|+.|+.|++||++++
T Consensus       187 ~~~~d~~i~iwd~~~~~~~~~~~~~~h~~--------------------~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~  246 (437)
T 3gre_A          187 ALTNLSRVIIFDIRTLERLQIIENSPRHG--------------------AVSSICIDEECCVLILGTTRGIIDIWDIRFN  246 (437)
T ss_dssp             EEETTSEEEEEETTTCCEEEEEECCGGGC--------------------CEEEEEECTTSCEEEEEETTSCEEEEETTTT
T ss_pred             EEeCCCeEEEEeCCCCeeeEEEccCCCCC--------------------ceEEEEECCCCCEEEEEcCCCeEEEEEcCCc
Confidence            999999999999999999999887  443                    8999999999999999999999999999999


Q ss_pred             ceEEEEEeccCCccccccccceee----eeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC------------
Q psy7108         186 ILLKKFTITQNKSLDGINDFINRR----KMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK------------  249 (703)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~v~~~----~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~------------  249 (703)
                      +++..+...       +...|.++    .|++++..+++++.+      ..|++||++++++...+.+            
T Consensus       247 ~~~~~~~~~-------~~~~v~~~~~~~~~s~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  313 (437)
T 3gre_A          247 VLIRSWSFG-------DHAPITHVEVCQFYGKNSVIVVGGSSK------TFLTIWNFVKGHCQYAFINSDEQPSMEHFLP  313 (437)
T ss_dssp             EEEEEEBCT-------TCEEEEEEEECTTTCTTEEEEEEESTT------EEEEEEETTTTEEEEEEESSSSCCCGGGGSC
T ss_pred             cEEEEEecC-------CCCceEEEEeccccCCCccEEEEEcCC------CcEEEEEcCCCcEEEEEEcCCCCCccceecc
Confidence            888877521       23478888    455667788887766      4899999998876555442            


Q ss_pred             --------------CccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCcee
Q psy7108         250 --------------PEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVF  285 (703)
Q Consensus       250 --------------h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~  285 (703)
                                    |...|++++|+ ++++|++++.|+ |++||+.+++..
T Consensus       314 ~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~  363 (437)
T 3gre_A          314 IEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSS  363 (437)
T ss_dssp             BCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGC
T ss_pred             cccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccc
Confidence                          56678899999 778999999999 999999887653

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=99.94  E-value=1.4e-25  Score=237.30  Aligned_cols=245  Identities=13%  Similarity=0.184  Sum_probs=198.4

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEE-EEEeC---CCcEEEEEcCCCceeE-EEecCCCcEEEEEEecC---CCEEEEEECC
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGM-VSASW---DKTVKLWNAVETDTQH-ETIQLLSDALCVAYKPD---GTEIVVATLD  112 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L-~sgs~---Dg~V~iWd~~~~~~~~-~~~~~~~~V~~v~~spd---g~~las~s~d  112 (703)
                      ..+.+|.+.|++++|+|  ++..+ ++|+.   ||.|++||+.+++... ....|...|.+++|+|+   +++|++++.|
T Consensus        12 ~~~~~h~~~v~~~~~~p--~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d   89 (357)
T 3i2n_A           12 HIQKGFNYTVFDCKWVP--CSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFG   89 (357)
T ss_dssp             EEEEECSSCEEEEEECT--TSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETT
T ss_pred             hhccCCCCceEEEEEcC--CCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCC
Confidence            56688999999999999  88655 56665   9999999998876543 34479999999999999   6999999999


Q ss_pred             CeEEEEEcCCCc-EEEEEeccccCCCCCCCCccchhhcccCCccEEEEE------EcCCCCEEEEEecCCcEEEEECCCC
Q psy7108         113 GQLIMFDVESAA-QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVC------YSADGSCILAAGQSKYICIYSSREG  185 (703)
Q Consensus       113 g~I~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~------~spdg~~l~s~s~dg~I~lwD~~~~  185 (703)
                      |.|++||+++++ .+..+.+|..                    .|.+++      |+|+++.|++++.|+.|++||++++
T Consensus        90 g~i~iwd~~~~~~~~~~~~~~~~--------------------~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~  149 (357)
T 3i2n_A           90 GNLHIWNLEAPEMPVYSVKGHKE--------------------IINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQK  149 (357)
T ss_dssp             SCEEEECTTSCSSCSEEECCCSS--------------------CEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSC
T ss_pred             CeEEEEeCCCCCccEEEEEeccc--------------------ceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCC
Confidence            999999999887 7777777654                    899995      5789999999999999999999988


Q ss_pred             c-eEEEEEeccCCccccccccceeee----eccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEc
Q psy7108         186 I-LLKKFTITQNKSLDGINDFINRRK----MTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFS  260 (703)
Q Consensus       186 ~-~~~~~~~~~~~~~~~~~~~v~~~~----~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~s  260 (703)
                      . .+..+..+...    ....+.+++    |+|+++.+++++.++      .|++||+++++.. ....|...|.+++|+
T Consensus       150 ~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~l~~~~~d~------~i~i~d~~~~~~~-~~~~~~~~v~~~~~~  218 (357)
T 3i2n_A          150 DDPVANMEPVQGE----NKRDCWTVAFGNAYNQEERVVCAGYDNG------DIKLFDLRNMALR-WETNIKNGVCSLEFD  218 (357)
T ss_dssp             SSCSEEECCCTTS----CCCCEEEEEEECCCC-CCCEEEEEETTS------EEEEEETTTTEEE-EEEECSSCEEEEEES
T ss_pred             CCcceeccccCCC----CCCceEEEEEEeccCCCCCEEEEEccCC------eEEEEECccCcee-eecCCCCceEEEEcC
Confidence            6 66666544331    123566666    789999999888764      8999999988764 346688899999999


Q ss_pred             C---CCCEEEEEeCCC-EEEEEcCCCceecc-----------eeeeEEEccchhhh-HhhcCCcceEEEEEEecCch
Q psy7108         261 P---TGQAWVAATTEG-VHIYSLDSGYVFDP-----------FLLDISITPQSVKE-ALADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       261 p---dg~~l~s~s~Dg-v~iwd~~~~~~~~~-----------~~~~~~~spd~~~~-~l~sg~~~~~l~la~~l~~~  321 (703)
                      |   +++.+++++.|| |++||+.+++....           ...+++|+|++  . ++++++.++.+.+ |++...
T Consensus       219 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~~~~~dg~i~i-wd~~~~  292 (357)
T 3i2n_A          219 RKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQN--RELFLTAGGAGGLHL-WKYEYP  292 (357)
T ss_dssp             CSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTE--EEEEEEEETTSEEEE-EEEECC
T ss_pred             CCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCC--CcEEEEEeCCCcEEE-eecCCC
Confidence            9   999999999999 99999987654322           23678999998  6 7899999999998 887644

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=99.94  E-value=1.2e-24  Score=269.49  Aligned_cols=259  Identities=14%  Similarity=0.228  Sum_probs=224.1

Q ss_pred             ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEec--CCC
Q psy7108          28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKP--DGT  104 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~sp--dg~  104 (703)
                      +++|| .+++.+  ..+.+|.+.|.+++|+|  ++++|++|+.||+|++||+.+++.......|...|.+++|+|  ++.
T Consensus       639 i~vw~~~~~~~~--~~~~~h~~~v~~~~~s~--~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~  714 (1249)
T 3sfz_A          639 LQVFKAETGEKL--LDIKAHEDEVLCCAFSS--DDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHL  714 (1249)
T ss_dssp             EEEEETTTCCEE--EEECCCSSCEEEEEECT--TSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCC
T ss_pred             EEEEECCCCCEE--EEeccCCCCEEEEEEec--CCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCce
Confidence            67777 578888  89999999999999999  999999999999999999999988888888999999999999  456


Q ss_pred             EEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCC
Q psy7108         105 EIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSRE  184 (703)
Q Consensus       105 ~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~  184 (703)
                      .+++|+.|+.|++||+++++....+.+|..                    .|++++|+|+++.+++++.||.|++||+++
T Consensus       715 ~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~--------------------~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~  774 (1249)
T 3sfz_A          715 LLATGSNDFFLKLWDLNQKECRNTMFGHTN--------------------SVNHCRFSPDDELLASCSADGTLRLWDVRS  774 (1249)
T ss_dssp             EEEEEETTSCEEEEETTSSSEEEEECCCSS--------------------CEEEEEECSSTTEEEEEESSSEEEEEEGGG
T ss_pred             EEEEEeCCCeEEEEECCCcchhheecCCCC--------------------CEEEEEEecCCCEEEEEECCCeEEEEeCCC
Confidence            899999999999999999999988888765                    899999999999999999999999999999


Q ss_pred             CceEEEEEeccC-----CccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeec-CCccceEEEE
Q psy7108         185 GILLKKFTITQN-----KSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL-KPEVRVFCVK  258 (703)
Q Consensus       185 ~~~~~~~~~~~~-----~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~-~h~~~V~~l~  258 (703)
                      +.....+.....     .........+.+++|+|+|+.+++++.+       .+.+||..++....... +|...|.+++
T Consensus       775 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~-------~v~~~d~~~~~~~~~~~~~~~~~v~~~~  847 (1249)
T 3sfz_A          775 ANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKN-------KVLLFDIHTSGLLAEIHTGHHSTIQYCD  847 (1249)
T ss_dssp             TEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETT-------EEEEEETTTCCEEEEEECSSSSCCCEEE
T ss_pred             CcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCC-------cEEEEEecCCCceeEEcCCCCCceEEEE
Confidence            988777654321     1112233478899999999999887743       69999999988776665 7889999999


Q ss_pred             EcCCCCEEEEEeCCC-EEEEEcCCCceecce------eeeEEEccchhhhHhhcCCcceEEEEEEecCc
Q psy7108         259 FSPTGQAWVAATTEG-VHIYSLDSGYVFDPF------LLDISITPQSVKEALADKDYAKALMMSLKLNE  320 (703)
Q Consensus       259 ~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~  320 (703)
                      |+|+++.+++++.|+ |++|++.++.....+      ..+++|+|++  ..+++++.++.+++ |++..
T Consensus       848 ~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg--~~l~s~s~dg~v~v-w~~~~  913 (1249)
T 3sfz_A          848 FSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDG--SSFLTASDDQTIRV-WETKK  913 (1249)
T ss_dssp             ECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTS--SEEEEEETTSCEEE-EEHHH
T ss_pred             EcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCC--CEEEEEeCCCeEEE-EEccc
Confidence            999999999999999 999999988765443      4679999999  78999999999998 88653

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=99.93  E-value=1.9e-25  Score=235.26  Aligned_cols=237  Identities=13%  Similarity=0.213  Sum_probs=195.4

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc---eeEEEecCCCcEEEEEEecCCC-EEEEEECCCeEE
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD---TQHETIQLLSDALCVAYKPDGT-EIVVATLDGQLI  116 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~---~~~~~~~~~~~V~~v~~spdg~-~las~s~dg~I~  116 (703)
                      ....+|.+.|++++|+|  ++++|++++.||.|++|++.++.   .......|...|.+++|+|+++ +|++++.||.|+
T Consensus         5 ~~~~~h~~~v~~~~~s~--~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~   82 (342)
T 1yfq_A            5 QIEQAPKDYISDIKIIP--SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEIL   82 (342)
T ss_dssp             ECSSCCSSCEEEEEEEG--GGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEE
T ss_pred             ecccCCCCcEEEEEEcC--CCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEE
Confidence            44568999999999999  99999999999999999998776   3556668999999999999999 999999999999


Q ss_pred             EEEc-CCCcEEEEEec--cccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCC---------
Q psy7108         117 MFDV-ESAAQVGSVEA--RRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSRE---------  184 (703)
Q Consensus       117 vwd~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~---------  184 (703)
                      +||+ .+++. ..+.+  |.                    ..|.+++|+| ++.+++++.|+.|++||+++         
T Consensus        83 ~wd~~~~~~~-~~~~~~~~~--------------------~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~  140 (342)
T 1yfq_A           83 KVDLIGSPSF-QALTNNEAN--------------------LGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVK  140 (342)
T ss_dssp             EECSSSSSSE-EECBSCCCC--------------------SCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEE
T ss_pred             EEEeccCCce-EeccccCCC--------------------CceEEEEeCC-CCEEEEEcCCCeEEEEccccccccccccc
Confidence            9999 87765 44544  43                    4899999999 99999999999999999986         


Q ss_pred             CceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCC-Ccc--ceeecCCccceEEEEEcC
Q psy7108         185 GILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKK-GDM--AARVLKPEVRVFCVKFSP  261 (703)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~-~~~--~~~~~~h~~~V~~l~~sp  261 (703)
                      ++++..+        . +...+.+++|+|++  +++++.++      .|++||+++ +..  ......|...+.+++|+|
T Consensus       141 ~~~~~~~--------~-~~~~v~~~~~~~~~--l~~~~~d~------~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~  203 (342)
T 1yfq_A          141 NLNSNNT--------K-VKNKIFTMDTNSSR--LIVGMNNS------QVQWFRLPLCEDDNGTIEESGLKYQIRDVALLP  203 (342)
T ss_dssp             ESCSSSS--------S-SCCCEEEEEECSSE--EEEEESTT------EEEEEESSCCTTCCCEEEECSCSSCEEEEEECS
T ss_pred             CCeeeEE--------e-eCCceEEEEecCCc--EEEEeCCC------eEEEEECCccccccceeeecCCCCceeEEEECC
Confidence            4333222        1 45689999999988  66665543      899999988 543  334456888999999999


Q ss_pred             -CCCEEEEEeCCC-EEEEEcCCC------ce------ecc---------eeeeEEEccchhhhHhhcCCcceEEEEEEec
Q psy7108         262 -TGQAWVAATTEG-VHIYSLDSG------YV------FDP---------FLLDISITPQSVKEALADKDYAKALMMSLKL  318 (703)
Q Consensus       262 -dg~~l~s~s~Dg-v~iwd~~~~------~~------~~~---------~~~~~~~spd~~~~~l~sg~~~~~l~la~~l  318 (703)
                       +++++++++.|| +++|+++..      +.      +..         ...+++|+|++  .++++++.++.+.+ |++
T Consensus       204 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~--~~l~~~~~dg~i~v-wd~  280 (342)
T 1yfq_A          204 KEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRH--KFLYTAGSDGIISC-WNL  280 (342)
T ss_dssp             GGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTT--CCEEEEETTSCEEE-EET
T ss_pred             CCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCC--CEEEEecCCceEEE-EcC
Confidence             999999999999 999999876      22      111         45678999999  78999999999998 988


Q ss_pred             Cch
Q psy7108         319 NEQ  321 (703)
Q Consensus       319 ~~~  321 (703)
                      ...
T Consensus       281 ~~~  283 (342)
T 1yfq_A          281 QTR  283 (342)
T ss_dssp             TTT
T ss_pred             ccH
Confidence            754

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=99.93  E-value=2e-24  Score=233.76  Aligned_cols=221  Identities=14%  Similarity=0.208  Sum_probs=183.3

Q ss_pred             ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCC-CceeEEEecCCCcEEEEEEecCCCE
Q psy7108          28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVE-TDTQHETIQLLSDALCVAYKPDGTE  105 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~-~~~~~~~~~~~~~V~~v~~spdg~~  105 (703)
                      +++|| .+++.+  ..+.+|...|.+++|++    +.|++|+.||.|++||+.. .........|.+.|.+++|+|+++.
T Consensus       158 i~iwd~~~~~~~--~~~~~~~~~v~~~~~~~----~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  231 (401)
T 4aez_A          158 VDIYDVESQTKL--RTMAGHQARVGCLSWNR----HVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQ  231 (401)
T ss_dssp             EEEEETTTCCEE--EEECCCSSCEEEEEEET----TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSE
T ss_pred             EEEEECcCCeEE--EEecCCCCceEEEEECC----CEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCE
Confidence            67777 467777  89999999999999965    7999999999999999984 4456666779999999999999999


Q ss_pred             EEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCC-EEEEEe--cCCcEEEEEC
Q psy7108         106 IVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGS-CILAAG--QSKYICIYSS  182 (703)
Q Consensus       106 las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~-~l~s~s--~dg~I~lwD~  182 (703)
                      |++++.|+.|++||+++++....+..|..                    .|.+++|+|++. .+++++  .|+.|++||+
T Consensus       232 l~s~~~d~~v~iwd~~~~~~~~~~~~~~~--------------------~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~  291 (401)
T 4aez_A          232 LASGGNDNVVQIWDARSSIPKFTKTNHNA--------------------AVKAVAWCPWQSNLLATGGGTMDKQIHFWNA  291 (401)
T ss_dssp             EEEEETTSCEEEEETTCSSEEEEECCCSS--------------------CCCEEEECTTSTTEEEEECCTTTCEEEEEET
T ss_pred             EEEEeCCCeEEEccCCCCCccEEecCCcc--------------------eEEEEEECCCCCCEEEEecCCCCCEEEEEEC
Confidence            99999999999999999998888877654                    899999999775 555554  6999999999


Q ss_pred             CCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccce--eecCCccceEEEEEc
Q psy7108         183 REGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAA--RVLKPEVRVFCVKFS  260 (703)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~--~~~~h~~~V~~l~~s  260 (703)
                      ++++++..+..         ...+.+++|+|+++.++++++.. +   ..|++||+.+++...  .+.+|...|.+++|+
T Consensus       292 ~~~~~~~~~~~---------~~~v~~~~~s~~~~~l~~~~g~~-d---g~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s  358 (401)
T 4aez_A          292 ATGARVNTVDA---------GSQVTSLIWSPHSKEIMSTHGFP-D---NNLSIWSYSSSGLTKQVDIPAHDTRVLYSALS  358 (401)
T ss_dssp             TTCCEEEEEEC---------SSCEEEEEECSSSSEEEEEECTT-T---CEEEEEEEETTEEEEEEEEECCSSCCCEEEEC
T ss_pred             CCCCEEEEEeC---------CCcEEEEEECCCCCeEEEEeecC-C---CcEEEEecCCccceeEEEecCCCCCEEEEEEC
Confidence            99998888752         23789999999999998864211 1   389999999865443  456899999999999


Q ss_pred             CCCCEEEEEeCCC-EEEEEcCCCceecc
Q psy7108         261 PTGQAWVAATTEG-VHIYSLDSGYVFDP  287 (703)
Q Consensus       261 pdg~~l~s~s~Dg-v~iwd~~~~~~~~~  287 (703)
                      |+|++|++++.|| |++|++.+++....
T Consensus       359 ~dg~~l~s~~~dg~i~iw~~~~~~~~~~  386 (401)
T 4aez_A          359 PDGRILSTAASDENLKFWRVYDGDHVKR  386 (401)
T ss_dssp             TTSSEEEEECTTSEEEEEECCC------
T ss_pred             CCCCEEEEEeCCCcEEEEECCCCccccc
Confidence            9999999999999 99999998876543

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=99.93  E-value=1.6e-24  Score=224.80  Aligned_cols=236  Identities=13%  Similarity=0.208  Sum_probs=197.9

Q ss_pred             CccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeE
Q psy7108          36 RVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQL  115 (703)
Q Consensus        36 ~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I  115 (703)
                      ++.  +++.+|.+.|++++| |  ++++|++|+.||.|++||+.++........|...|.+++|+|+++.+++++.|+.|
T Consensus         9 ~~~--~~l~~h~~~v~~~~~-~--~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i   83 (313)
T 3odt_A            9 QLS--ATLKGHDQDVRDVVA-V--DDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMI   83 (313)
T ss_dssp             EEE--EEECCCSSCEEEEEE-E--ETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCE
T ss_pred             HHH--HHhhCCCCCcEEEEe-c--CCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeE
Confidence            455  789999999999999 8  89999999999999999998887777778899999999999999999999999999


Q ss_pred             EEEEcCCC---cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEE
Q psy7108         116 IMFDVESA---AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFT  192 (703)
Q Consensus       116 ~vwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~  192 (703)
                      ++|++...   +....+.+|.                    ..|.+++|  +++.+++++.|+.|++||  .++....+.
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~--------------------~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~  139 (313)
T 3odt_A           84 NGVPLFATSGEDPLYTLIGHQ--------------------GNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQ  139 (313)
T ss_dssp             EEEETTCCTTSCC-CEECCCS--------------------SCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEE
T ss_pred             EEEEeeecCCCCcccchhhcc--------------------cCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecc
Confidence            99998754   3444555544                    48999999  578999999999999999  566666666


Q ss_pred             eccCCccccccccceeeeecc-CCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC-CccceEEEEEcCCCCEEEEEe
Q psy7108         193 ITQNKSLDGINDFINRRKMTE-FGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK-PEVRVFCVKFSPTGQAWVAAT  270 (703)
Q Consensus       193 ~~~~~~~~~~~~~v~~~~~sp-dg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~-h~~~V~~l~~spdg~~l~s~s  270 (703)
                      .+.        ..+.+++++| ++..+++++.++      .+++||  ..+....+.. |...+.+++|+|++. +++++
T Consensus       140 ~~~--------~~v~~~~~~~~~~~~l~~~~~d~------~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~  202 (313)
T 3odt_A          140 AHN--------ASVWDAKVVSFSENKFLTASADK------TIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCS  202 (313)
T ss_dssp             CCS--------SCEEEEEEEETTTTEEEEEETTS------CEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEE
T ss_pred             cCC--------CceeEEEEccCCCCEEEEEECCC------CEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEcc
Confidence            544        4889999988 888888877664      799999  4445555665 889999999999998 99999


Q ss_pred             CCC-EEEEEcCCCceecce------eeeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108         271 TEG-VHIYSLDSGYVFDPF------LLDISITPQSVKEALADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       271 ~Dg-v~iwd~~~~~~~~~~------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~  321 (703)
                      .|+ |++||+.+++....+      ..+++|+|++  . +++++.++.+.+ |++...
T Consensus       203 ~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~--~-l~~~~~dg~v~i-wd~~~~  256 (313)
T 3odt_A          203 NDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG--D-IVSCGEDRTVRI-WSKENG  256 (313)
T ss_dssp             TTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS--C-EEEEETTSEEEE-ECTTTC
T ss_pred             CCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC--C-EEEEecCCEEEE-EECCCC
Confidence            999 999999988876544      3679999998  3 778889999998 987654

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=99.93  E-value=6e-25  Score=240.41  Aligned_cols=242  Identities=12%  Similarity=0.213  Sum_probs=198.0

Q ss_pred             ccccCCCcCeEEEEEcCCCC-CCEEEEEeCCCcEEEEEcCC----------CceeEEEecCCCcEEEEEEecCCC-EEEE
Q psy7108          41 EVLSGHEGPVSCIEFSPVLS-STGMVSASWDKTVKLWNAVE----------TDTQHETIQLLSDALCVAYKPDGT-EIVV  108 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~d-g~~L~sgs~Dg~V~iWd~~~----------~~~~~~~~~~~~~V~~v~~spdg~-~las  108 (703)
                      ....+|.+.|++++|+|  + +.+|++++.||.|++|++.+          ......+..|...|.+++|+|++. .|++
T Consensus       122 ~~~~~h~~~v~~l~~~p--~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s  199 (430)
T 2xyi_A          122 EIKINHEGEVNRARYMP--QNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLS  199 (430)
T ss_dssp             EEEEEESSCCSEEEEET--TEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEE
T ss_pred             EEEEcCCCcEEEEEECC--CCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEE
Confidence            45568999999999999  6 68999999999999999976          445667778999999999999998 9999


Q ss_pred             EECCCeEEEEEcCCCcE-------EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC-CCCEEEEEecCCcEEEE
Q psy7108         109 ATLDGQLIMFDVESAAQ-------VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA-DGSCILAAGQSKYICIY  180 (703)
Q Consensus       109 ~s~dg~I~vwd~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp-dg~~l~s~s~dg~I~lw  180 (703)
                      |+.||.|++||+.++..       ...+.+                    |...|.+++|+| ++..|++++.|+.|++|
T Consensus       200 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~--------------------h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~  259 (430)
T 2xyi_A          200 ASDDHTICLWDINATPKEHRVIDAKNIFTG--------------------HTAVVEDVAWHLLHESLFGSVADDQKLMIW  259 (430)
T ss_dssp             ECTTSCEEEEETTSCCBGGGEEECSEEECC--------------------CSSCEEEEEECSSCTTEEEEEETTSEEEEE
T ss_pred             EeCCCeEEEEeCCCCCCCCceeccceeecC--------------------CCCCEeeeEEeCCCCCEEEEEeCCCeEEEE
Confidence            99999999999987422       122323                    445899999999 67899999999999999


Q ss_pred             ECCCC---ceEEEEEeccCCccccccccceeeeeccCCCE-EEEEcccCCCCCeeEEECCCCCC-CccceeecCCccceE
Q psy7108         181 SSREG---ILLKKFTITQNKSLDGINDFINRRKMTEFGNV-SLIETRETHEGGNVVLKLPGVKK-GDMAARVLKPEVRVF  255 (703)
Q Consensus       181 D~~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~-l~~~~~~~~~~~~~~i~iwd~~~-~~~~~~~~~h~~~V~  255 (703)
                      |++++   +.+..+..        +...|++++|+|+++. +++++.+      +.|++||+++ ++.+..+..|...|.
T Consensus       260 d~~~~~~~~~~~~~~~--------~~~~v~~i~~~p~~~~~l~tg~~d------g~v~vwd~~~~~~~~~~~~~h~~~v~  325 (430)
T 2xyi_A          260 DTRNNNTSKPSHTVDA--------HTAEVNCLSFNPYSEFILATGSAD------KTVALWDLRNLKLKLHSFESHKDEIF  325 (430)
T ss_dssp             ETTCSCSSSCSEEEEC--------CSSCEEEEEECSSCTTEEEEEETT------SEEEEEETTCTTSCSEEEECCSSCEE
T ss_pred             ECCCCCCCcceeEeec--------CCCCeEEEEeCCCCCCEEEEEeCC------CeEEEEeCCCCCCCeEEeecCCCCEE
Confidence            99986   45555543        3458999999999985 5555554      3899999998 566778888999999


Q ss_pred             EEEEcCCCC-EEEEEeCCC-EEEEEcCCC--------------cee------cceeeeEEEccchhhh-HhhcCCcceEE
Q psy7108         256 CVKFSPTGQ-AWVAATTEG-VHIYSLDSG--------------YVF------DPFLLDISITPQSVKE-ALADKDYAKAL  312 (703)
Q Consensus       256 ~l~~spdg~-~l~s~s~Dg-v~iwd~~~~--------------~~~------~~~~~~~~~spd~~~~-~l~sg~~~~~l  312 (703)
                      +++|+|+++ .|++++.|+ |+|||+...              +.+      .....+++|+|++  . ++++++.++.+
T Consensus       326 ~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~--~~~l~s~s~dg~i  403 (430)
T 2xyi_A          326 QVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE--PWIICSVSEDNIM  403 (430)
T ss_dssp             EEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSS--TTEEEEEETTSEE
T ss_pred             EEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCC--CCEEEEEECCCCE
Confidence            999999996 589999999 999999762              221      2234679999998  6 78889999999


Q ss_pred             EEEEecCch
Q psy7108         313 MMSLKLNEQ  321 (703)
Q Consensus       313 ~la~~l~~~  321 (703)
                      .+ |++...
T Consensus       404 ~i-w~~~~~  411 (430)
T 2xyi_A          404 QV-WQMAEN  411 (430)
T ss_dssp             EE-EEECHH
T ss_pred             EE-eEcccc
Confidence            98 998754

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=99.93  E-value=2.4e-24  Score=224.08  Aligned_cols=256  Identities=12%  Similarity=0.204  Sum_probs=203.5

Q ss_pred             ceeec-cCCCccccccc--cCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCC
Q psy7108          28 VKKGD-MAARVLKPEVL--SGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGT  104 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l--~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~  104 (703)
                      |++|| .+|+++  +++  .+|...|++++|+|  ++++|++|+.||+|++||+++++.......|...+.++.+  ++.
T Consensus        47 V~iWd~~tg~~~--~~~~~~~~~~~V~~v~~~~--~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~--~~~  120 (318)
T 4ggc_A           47 VYLWSASSGDIL--QLLQMEQPGEYISSVAWIK--EGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSY  120 (318)
T ss_dssp             EEEEETTTCCEE--EEEECCSTTCCEEEEEECT--TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE--ETT
T ss_pred             EEEEECCCCCEE--EEEEecCCCCeEEEEEECC--CCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeec--CCC
Confidence            56666 478887  655  57888999999999  9999999999999999999999888888889888876554  578


Q ss_pred             EEEEEECCCeEEEEEcCCC-cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECC
Q psy7108         105 EIVVATLDGQLIMFDVESA-AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSR  183 (703)
Q Consensus       105 ~las~s~dg~I~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~  183 (703)
                      .+++++.++.+++|+..+. ..+..+.+|..                    .+..++++++++++++++.|+.|++||++
T Consensus       121 ~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~l~s~~~d~~i~iwd~~  180 (318)
T 4ggc_A          121 ILSSGSRSGHIHHHDVRVAEHHVATLSGHSQ--------------------EVCGLRWAPDGRHLASGGNDNLVNVWPSA  180 (318)
T ss_dssp             EEEEEETTSEEEEEETTSSSCEEEEEECCSS--------------------CEEEEEECTTSSEEEEEETTSCEEEEESS
T ss_pred             EEEEEecCCceEeeecCCCceeEEEEcCccC--------------------ceEEEEEcCCCCEEEEEecCcceeEEECC
Confidence            9999999999999999876 44556666654                    89999999999999999999999999999


Q ss_pred             CCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCC
Q psy7108         184 EGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTG  263 (703)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg  263 (703)
                      +++......    .....+...+..++++|++..++.....+.+   ..|++||......... ..+...+..+.|+|++
T Consensus       181 ~~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~---~~i~lwd~~~~~~~~~-~~~~~~v~~~~~~~~~  252 (318)
T 4ggc_A          181 PGEGGWVPL----QTFTQHQGAVKAVAWCPWQSNVLATGGGTSD---RHIRIWNVCSGACLSA-VDAHSQVCSILWSPHY  252 (318)
T ss_dssp             CBTTBSCCS----EEECCCCSCEEEEEECTTSTTEEEEEECTTT---CEEEEEETTTCCEEEE-EECSSCEEEEEEETTT
T ss_pred             CCcccccce----eeecccCCceEEEEecCCCCcEEEEEecCCC---CEEEEEeccccccccc-ccceeeeeeeeecccc
Confidence            865322111    0112234578899999988766543332212   4899999988765543 4466779999999999


Q ss_pred             CEEEEEe--CCC-EEEEEcCCCceecce------eeeEEEccchhhhHhhcCCcceEEEEEEecCc
Q psy7108         264 QAWVAAT--TEG-VHIYSLDSGYVFDPF------LLDISITPQSVKEALADKDYAKALMMSLKLNE  320 (703)
Q Consensus       264 ~~l~s~s--~Dg-v~iwd~~~~~~~~~~------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~  320 (703)
                      +.+++++  .|+ |++||+.+++.+..+      +.+++|+|++  .+|++++.|+.+++ |++.+
T Consensus       253 ~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg--~~l~S~s~D~~v~i-Wd~~~  315 (318)
T 4ggc_A          253 KELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDG--ATVASAAADETLRL-WRCFE  315 (318)
T ss_dssp             TEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTS--SCEEEEETTTEEEE-ECCSC
T ss_pred             cceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCC--CEEEEEecCCeEEE-EECCC
Confidence            9987655  678 999999999876554      4679999999  88999999999999 98864

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=99.93  E-value=9e-25  Score=239.27  Aligned_cols=244  Identities=15%  Similarity=0.319  Sum_probs=199.7

Q ss_pred             ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEE
Q psy7108          28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEI  106 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~l  106 (703)
                      +++|| .+++++  ..+.+|.+.|.+++|    ++++|++|+.||+|++||+.+++.......|...|.+++|+  +..+
T Consensus       155 i~iwd~~~~~~~--~~~~~h~~~v~~l~~----~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l  226 (435)
T 1p22_A          155 IKIWDKNTLECK--RILTGHTGSVLCLQY----DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMM  226 (435)
T ss_dssp             EEEEESSSCCEE--EEECCCSSCEEEEEC----CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC--TTEE
T ss_pred             EEEEeCCCCeEE--EEEcCCCCcEEEEEE----CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc--CCEE
Confidence            56666 477888  899999999999988    45899999999999999999998888888899999999997  4599


Q ss_pred             EEEECCCeEEEEEcCCCcEE---EEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECC
Q psy7108         107 VVATLDGQLIMFDVESAAQV---GSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSR  183 (703)
Q Consensus       107 as~s~dg~I~vwd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~  183 (703)
                      ++|+.||.|++||+++++..   ..+.+|.                    ..|.+++|  +++++++|+.|+.|++||++
T Consensus       227 ~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~--------------------~~v~~~~~--~~~~l~s~~~dg~i~vwd~~  284 (435)
T 1p22_A          227 VTCSKDRSIAVWDMASPTDITLRRVLVGHR--------------------AAVNVVDF--DDKYIVSASGDRTIKVWNTS  284 (435)
T ss_dssp             EEEETTSCEEEEECSSSSCCEEEEEECCCS--------------------SCEEEEEE--ETTEEEEEETTSEEEEEETT
T ss_pred             EEeeCCCcEEEEeCCCCCCceeeeEecCCC--------------------CcEEEEEe--CCCEEEEEeCCCeEEEEECC
Confidence            99999999999999887654   4444444                    48999999  78999999999999999999


Q ss_pred             CCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCC
Q psy7108         184 EGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTG  263 (703)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg  263 (703)
                      +++++..+..+..        .+.++.+  ++..+++++.++      .|++||+++++++..+.+|...|.+++|  ++
T Consensus       285 ~~~~~~~~~~~~~--------~v~~~~~--~~~~l~~g~~dg------~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~  346 (435)
T 1p22_A          285 TCEFVRTLNGHKR--------GIACLQY--RDRLVVSGSSDN------TIRLWDIECGACLRVLEGHEELVRCIRF--DN  346 (435)
T ss_dssp             TCCEEEEEECCSS--------CEEEEEE--ETTEEEEEETTS------CEEEEETTTCCEEEEECCCSSCEEEEEC--CS
T ss_pred             cCcEEEEEcCCCC--------cEEEEEe--CCCEEEEEeCCC------eEEEEECCCCCEEEEEeCCcCcEEEEEe--cC
Confidence            9999988875544        7778877  467888877664      8999999999999999999999999998  78


Q ss_pred             CEEEEEeCCC-EEEEEcCCCc---------eecce------eeeEEEccchhhhHhhcCCcceEEEEEEecCchhHH
Q psy7108         264 QAWVAATTEG-VHIYSLDSGY---------VFDPF------LLDISITPQSVKEALADKDYAKALMMSLKLNEQGLI  324 (703)
Q Consensus       264 ~~l~s~s~Dg-v~iwd~~~~~---------~~~~~------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~~~~  324 (703)
                      +++++|+.|| |++||+.++.         ....+      ..++++  ++  ..+++++.|+.+.+ |++......
T Consensus       347 ~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~--~~l~s~s~Dg~i~i-wd~~~~~~~  418 (435)
T 1p22_A          347 KRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DE--FQIVSSSHDDTILI-WDFLNDPAA  418 (435)
T ss_dssp             SEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CS--SCEEECCSSSEEEE-EC-------
T ss_pred             CEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CC--CEEEEEeCCCEEEE-EECCCCCCc
Confidence            8999999999 9999986654         22222      345666  55  67899999999999 998765433

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=99.93  E-value=2.2e-24  Score=237.77  Aligned_cols=243  Identities=12%  Similarity=0.210  Sum_probs=199.8

Q ss_pred             ccccCCCcCe-EEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEE
Q psy7108          41 EVLSGHEGPV-SCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFD  119 (703)
Q Consensus        41 ~~l~gH~~~V-~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd  119 (703)
                      ..+.+|.+.| .++.+    ++++|++|+.||+|++||+.+++....+..|.+.|.+++|+|++ .+++|+.||+|++||
T Consensus       115 ~~l~~h~~~v~~~~~~----~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd  189 (464)
T 3v7d_B          115 TTLRGHMTSVITCLQF----EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWD  189 (464)
T ss_dssp             EEEECCSSSCEEEEEE----ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEE
T ss_pred             EEEcCCCCCcEEEEEE----CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEE
Confidence            6789998885 66555    45799999999999999999998778888899999999999988 999999999999999


Q ss_pred             cCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEc--CCCCEEEEEecCCcEEEEECCCCceEEEEEecc--
Q psy7108         120 VESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYS--ADGSCILAAGQSKYICIYSSREGILLKKFTITQ--  195 (703)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~s--pdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~--  195 (703)
                      +++++.+..+.+|..                    .|.+++|+  ++++++++++.|+.|++||++++..........  
T Consensus       190 ~~~~~~~~~~~~h~~--------------------~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~  249 (464)
T 3v7d_B          190 IKKGCCTHVFEGHNS--------------------TVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDY  249 (464)
T ss_dssp             TTTTEEEEEECCCSS--------------------CEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCS
T ss_pred             CCCCcEEEEECCCCC--------------------ccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCc
Confidence            999999988887765                    89999998  578999999999999999999876433211110  


Q ss_pred             -------------CCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCC
Q psy7108         196 -------------NKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPT  262 (703)
Q Consensus       196 -------------~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spd  262 (703)
                                   .....++...+.+  ++++++.+++++.++      .|++||+++++.+..+.+|...|.+++|+|+
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~~~~~l~~~~~d~------~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~  321 (464)
T 3v7d_B          250 PLVFHTPEENPYFVGVLRGHMASVRT--VSGHGNIVVSGSYDN------TLIVWDVAQMKCLYILSGHTDRIYSTIYDHE  321 (464)
T ss_dssp             SEEESCGGGCTTEEEEECCCSSCEEE--EEEETTEEEEEETTS------CEEEEETTTTEEEEEECCCSSCEEEEEEETT
T ss_pred             ceEeeccCCCeEEEEEccCccceEEE--EcCCCCEEEEEeCCC------eEEEEECCCCcEEEEecCCCCCEEEEEEcCC
Confidence                         0012234445554  478899998888764      8999999999999999999999999999999


Q ss_pred             CCEEEEEeCCC-EEEEEcCCCceeccee------eeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108         263 GQAWVAATTEG-VHIYSLDSGYVFDPFL------LDISITPQSVKEALADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       263 g~~l~s~s~Dg-v~iwd~~~~~~~~~~~------~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~  321 (703)
                      ++.+++++.|+ |++||+.+++....+.      ..+.+++    ..+++++.++.+++ |++...
T Consensus       322 ~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~----~~l~s~s~dg~v~v-wd~~~~  382 (464)
T 3v7d_B          322 RKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSD----KFLVSAAADGSIRG-WDANDY  382 (464)
T ss_dssp             TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECS----SEEEEEETTSEEEE-EETTTC
T ss_pred             CCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEcC----CEEEEEeCCCcEEE-EECCCC
Confidence            99999999999 9999999988765543      4566663    57889999999998 988753

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=99.93  E-value=3e-24  Score=235.72  Aligned_cols=231  Identities=19%  Similarity=0.368  Sum_probs=158.1

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEc
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDV  120 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~  120 (703)
                      ..+.+|...|.+++|++    +.+++|+.||+|++||+.+++.......|...|.+++|  +++.+++++.|+.|++||+
T Consensus       193 ~~~~~h~~~v~~~~~~~----~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~  266 (445)
T 2ovr_B          193 HTLYGHTSTVRCMHLHE----KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDP  266 (445)
T ss_dssp             EEECCCSSCEEEEEEET----TEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEG
T ss_pred             EEECCCCCcEEEEEecC----CEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEEC
Confidence            44444444444444432    33444444444444444444443444444444444444  3444444444444444444


Q ss_pred             CCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccc
Q psy7108         121 ESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLD  200 (703)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~  200 (703)
                      ++++.+..+.+                    |...|.+++|  +++.+++++.|+.|++||+++++++..+..+..    
T Consensus       267 ~~~~~~~~~~~--------------------~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~----  320 (445)
T 2ovr_B          267 ETETCLHTLQG--------------------HTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS----  320 (445)
T ss_dssp             GGTEEEEEECC--------------------CSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCS----
T ss_pred             CCCcEeEEecC--------------------CCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcc----
Confidence            44444444443                    4458999999  789999999999999999999998888765443    


Q ss_pred             cccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC---CccceEEEEEcCCCCEEEEEeCCC-EEE
Q psy7108         201 GINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK---PEVRVFCVKFSPTGQAWVAATTEG-VHI  276 (703)
Q Consensus       201 ~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~---h~~~V~~l~~spdg~~l~s~s~Dg-v~i  276 (703)
                          .+.++.+  +++.+++++.++      .|++||+++++....+..   |...|.+++|+  ++++++++.|| |++
T Consensus       321 ----~v~~~~~--~~~~l~~~~~dg------~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~i  386 (445)
T 2ovr_B          321 ----LTSGMEL--KDNILVSGNADS------TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKL  386 (445)
T ss_dssp             ----CEEEEEE--ETTEEEEEETTS------CEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEE
T ss_pred             ----cEEEEEE--eCCEEEEEeCCC------eEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEE
Confidence                5555555  567888777654      899999999988888776   88899999996  57999999999 999


Q ss_pred             EEcCCCceecce-----------eeeEEEccchhhhHhhcCCcceE----EEEEEecCc
Q psy7108         277 YSLDSGYVFDPF-----------LLDISITPQSVKEALADKDYAKA----LMMSLKLNE  320 (703)
Q Consensus       277 wd~~~~~~~~~~-----------~~~~~~spd~~~~~l~sg~~~~~----l~la~~l~~  320 (703)
                      ||+.+++....+           ..+++|+|++  ..+++++.++.    +.+ |+++.
T Consensus       387 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~--~~la~~~~dg~~~~~l~v-~df~~  442 (445)
T 2ovr_B          387 WDLKTGEFIRNLVTLESGGSGGVVWRIRASNTK--LVCAVGSRNGTEETKLLV-LDFDV  442 (445)
T ss_dssp             EETTTCCEEEEEEECTTGGGTCEEEEEEECSSE--EEEEEECSSSSSCCEEEE-EECCC
T ss_pred             EECCCCceeeeeeccccCCCCceEEEEEecCCE--EEEEEcccCCCCccEEEE-EECCC
Confidence            999998876554           4679999999  78888888886    665 76653

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.93  E-value=2.3e-25  Score=248.73  Aligned_cols=248  Identities=7%  Similarity=0.090  Sum_probs=183.3

Q ss_pred             cccCCCcCeEEEEEcCCCCC---------CEEEE-------------------EeCCCcEEEEEcCCCcee----EEEec
Q psy7108          42 VLSGHEGPVSCIEFSPVLSS---------TGMVS-------------------ASWDKTVKLWNAVETDTQ----HETIQ   89 (703)
Q Consensus        42 ~l~gH~~~V~~l~~sp~~dg---------~~L~s-------------------gs~Dg~V~iWd~~~~~~~----~~~~~   89 (703)
                      ++. +.+.|.+++|+|  ++         ++||+                   ++.|++|+||++.+++..    ..+..
T Consensus       129 ~~~-~~~~V~sv~w~p--~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~  205 (524)
T 2j04_B          129 IYN-VGGLVTDIAWLN--IEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVH  205 (524)
T ss_dssp             EEE-CCC--CCCSCEE--ECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEE
T ss_pred             EEE-CCCceeEEEecc--cCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEe
Confidence            444 678899999998  65         55655                   557899999999776532    22345


Q ss_pred             CCCcEEEEEEecC------CCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC
Q psy7108          90 LLSDALCVAYKPD------GTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA  163 (703)
Q Consensus        90 ~~~~V~~v~~spd------g~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp  163 (703)
                      |.+.|.+++|+|+      +.+||+++.||+|++||+.+++.......+.         .........|...|++++|+|
T Consensus       206 ~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~---------~~p~~~l~~h~~~v~sv~~s~  276 (524)
T 2j04_B          206 SFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMC---------EKPSLTLSLADSLITTFDFLS  276 (524)
T ss_dssp             CCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECC---------CSCSEEECCTTTCEEEEEESS
T ss_pred             cCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceee---------cCceEEEEcCCCCEEEEEecC
Confidence            6789999999997      5799999999999999998764210000000         000011233556899999998


Q ss_pred             CCCEEEEEecCCcEEEEECCCCc-eEEEEEeccCCccccccccceee--eeccCC-CEEEEEcccCCCCCeeEEECCCCC
Q psy7108         164 DGSCILAAGQSKYICIYSSREGI-LLKKFTITQNKSLDGINDFINRR--KMTEFG-NVSLIETRETHEGGNVVLKLPGVK  239 (703)
Q Consensus       164 dg~~l~s~s~dg~I~lwD~~~~~-~~~~~~~~~~~~~~~~~~~v~~~--~~spdg-~~l~~~~~~~~~~~~~~i~iwd~~  239 (703)
                      ++ .|++|+.||+|++||++++. +...+..        |...|.++  +++|+| ..+++++.++      +|++||++
T Consensus       277 ~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~--------H~~~V~sv~~~~s~~g~~~laS~S~D~------tvklWD~~  341 (524)
T 2j04_B          277 PT-TVVCGFKNGFVAEFDLTDPEVPSFYDQV--------HDSYILSVSTAYSDFEDTVVSTVAVDG------YFYIFNPK  341 (524)
T ss_dssp             SS-EEEEEETTSEEEEEETTBCSSCSEEEEC--------SSSCEEEEEEECCTTSCCEEEEEETTS------EEEEECGG
T ss_pred             CC-eEEEEeCCCEEEEEECCCCCCceEEeec--------ccccEEEEEEEcCCCCCeEEEEeccCC------eEEEEECC
Confidence            64 89999999999999999763 3344444        44589998  578888 7777777664      99999999


Q ss_pred             CCccceeecCCcc--ceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceec------ceeeeEEEccchhhhHhhcCCcce
Q psy7108         240 KGDMAARVLKPEV--RVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFD------PFLLDISITPQSVKEALADKDYAK  310 (703)
Q Consensus       240 ~~~~~~~~~~h~~--~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~------~~~~~~~~spd~~~~~l~sg~~~~  310 (703)
                      ++++...+.+|..  .|.+++|+|+++.+++++.|+ |++||+.++.+..      ..+.+++|+|++  ..+++++.|+
T Consensus       342 ~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g--~~l~Sgs~Dg  419 (524)
T 2j04_B          342 DIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLH--PMVLAGSADG  419 (524)
T ss_dssp             GHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSC--CBCEEEETTT
T ss_pred             CCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCC--CeEEEEECCC
Confidence            9887766666543  588999999999999999999 9999998876533      235789999999  7899999999


Q ss_pred             EEEEEEecC
Q psy7108         311 ALMMSLKLN  319 (703)
Q Consensus       311 ~l~la~~l~  319 (703)
                      ++++ |++.
T Consensus       420 tv~l-wd~~  427 (524)
T 2j04_B          420 SLII-TNAA  427 (524)
T ss_dssp             EEEC-CBSC
T ss_pred             EEEE-Eech
Confidence            9998 8764

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=99.93  E-value=1.2e-23  Score=226.66  Aligned_cols=216  Identities=15%  Similarity=0.167  Sum_probs=173.0

Q ss_pred             CCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCC---CEEEEEECCCeEEEEEcC
Q psy7108          45 GHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDG---TEIVVATLDGQLIMFDVE  121 (703)
Q Consensus        45 gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg---~~las~s~dg~I~vwd~~  121 (703)
                      +|...|.+++|+|. ++.+|++++.||.|++||+.+++ ......+...+.+++|+|.+   ..+++++.|+.|++||++
T Consensus        97 ~~~~~v~~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~  174 (408)
T 4a11_B           97 VHRYSVETVQWYPH-DTGMFTSSSFDKTLKVWDTNTLQ-TADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLK  174 (408)
T ss_dssp             CCSSCEEEEEECTT-CTTCEEEEETTSEEEEEETTTTE-EEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESS
T ss_pred             cCCCcEEEEEEccC-CCcEEEEEeCCCeEEEeeCCCCc-cceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCC
Confidence            69999999999994 56799999999999999998875 44455688899999999854   499999999999999999


Q ss_pred             CCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCC-EEEEEecCCcEEEEECCCCc-eEEEEEeccC---
Q psy7108         122 SAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGS-CILAAGQSKYICIYSSREGI-LLKKFTITQN---  196 (703)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~-~l~s~s~dg~I~lwD~~~~~-~~~~~~~~~~---  196 (703)
                      +++.+..+..|..                    .|.+++|+|+++ .+++++.|+.|++||++++. +...+..+..   
T Consensus       175 ~~~~~~~~~~~~~--------------------~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~  234 (408)
T 4a11_B          175 SGSCSHILQGHRQ--------------------EILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKS  234 (408)
T ss_dssp             SSCCCEEECCCCS--------------------CEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSC
T ss_pred             CcceeeeecCCCC--------------------cEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccc
Confidence            9988888877654                    899999999998 58899999999999998865 4444432211   


Q ss_pred             ----CccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC---------------------------------
Q psy7108         197 ----KSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK---------------------------------  239 (703)
Q Consensus       197 ----~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~---------------------------------  239 (703)
                          ....++...|.+++|+|+++.+++++.++      .+++||+.                                 
T Consensus       235 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (408)
T 4a11_B          235 QAVESANTAHNGKVNGLCFTSDGLHLLTVGTDN------RMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFV  308 (408)
T ss_dssp             CCTTTSSCSCSSCEEEEEECTTSSEEEEEETTS------CEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEE
T ss_pred             eeeccccccccCceeEEEEcCCCCEEEEecCCC------eEEEEECCCCccceeccccccccccccceeEEecCCCceEE
Confidence                12245677899999999999999887764      45566554                                 


Q ss_pred             --------------CCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecce
Q psy7108         240 --------------KGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPF  288 (703)
Q Consensus       240 --------------~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~  288 (703)
                                    +++.+..+.+|...|.+++|+|++++|++++.|| |++|++.+++.....
T Consensus       309 ~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~  372 (408)
T 4a11_B          309 FVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDD  372 (408)
T ss_dssp             EEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC-------
T ss_pred             EEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCC
Confidence                          4445556677999999999999999999999999 999999988775543

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=99.93  E-value=5e-24  Score=234.45  Aligned_cols=225  Identities=11%  Similarity=0.078  Sum_probs=181.7

Q ss_pred             CCCcCeEEEEEcCCCCCCEE-EEEeCCCcEEEEEcC--CCceeEEEe--cCCCcEEEEEEecCCCEEEEEECCCeEEEEE
Q psy7108          45 GHEGPVSCIEFSPVLSSTGM-VSASWDKTVKLWNAV--ETDTQHETI--QLLSDALCVAYKPDGTEIVVATLDGQLIMFD  119 (703)
Q Consensus        45 gH~~~V~~l~~sp~~dg~~L-~sgs~Dg~V~iWd~~--~~~~~~~~~--~~~~~V~~v~~spdg~~las~s~dg~I~vwd  119 (703)
                      +|.+.|++++|+|  ++++| ++|+.||+|++||+.  +++....+.  .+...|.+++|+|++++|++++.|+.|++|+
T Consensus       100 ~~~~~v~~~~~s~--d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~  177 (450)
T 2vdu_B          100 PIYSYIRNLRLTS--DESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSID  177 (450)
T ss_dssp             CCCCCEEEEEECT--TSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred             ccCCceEEEEEcC--CCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEe
Confidence            4556899999999  99996 899999999999998  666555554  5778999999999999999999999999999


Q ss_pred             cCCCcEEE----EEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC---CCEEEEEecCCcEEEEECCCCceEEEEE
Q psy7108         120 VESAAQVG----SVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD---GSCILAAGQSKYICIYSSREGILLKKFT  192 (703)
Q Consensus       120 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd---g~~l~s~s~dg~I~lwD~~~~~~~~~~~  192 (703)
                      +.+++...    .+.+|                    ...|++++|+|+   +++|++++.|+.|++||+++++++..+.
T Consensus       178 ~~~~~~~~~~~~~~~~h--------------------~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~  237 (450)
T 2vdu_B          178 INSIPEEKFTQEPILGH--------------------VSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWL  237 (450)
T ss_dssp             TTSCCCSSCCCCCSEEC--------------------SSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEEC
T ss_pred             cCCcccccccceeeecc--------------------cCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeee
Confidence            98776432    33333                    448999999999   9999999999999999999988877642


Q ss_pred             eccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC-----------------------
Q psy7108         193 ITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK-----------------------  249 (703)
Q Consensus       193 ~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~-----------------------  249 (703)
                             .+|...|.+++|+ +++++++++.++      .|++||+++++++..+..                       
T Consensus       238 -------~~h~~~v~~~~~s-d~~~l~s~~~d~------~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (450)
T 2vdu_B          238 -------FGHKHFVSSICCG-KDYLLLSAGGDD------KIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENN  303 (450)
T ss_dssp             -------CCCSSCEEEEEEC-STTEEEEEESSS------EEEEEETTTCCEEEEEECHHHHGGGCCTTSBC---------
T ss_pred             -------cCCCCceEEEEEC-CCCEEEEEeCCC------eEEEEECCCCcEeeeecchhhhhhhhhhccccccccccccc
Confidence                   2345589999999 999999887653      899999999987766652                       


Q ss_pred             --CccceEEEEEcCCCCEEEEEe-CCC-EEEEEc--CCC---ceecc-----eeeeEEEccchhhhHhhcCC
Q psy7108         250 --PEVRVFCVKFSPTGQAWVAAT-TEG-VHIYSL--DSG---YVFDP-----FLLDISITPQSVKEALADKD  307 (703)
Q Consensus       250 --h~~~V~~l~~spdg~~l~s~s-~Dg-v~iwd~--~~~---~~~~~-----~~~~~~~spd~~~~~l~sg~  307 (703)
                        ....|.+++|+|+++++++++ .++ |++|++  .++   .....     ...+++|+|++  .+++.++
T Consensus       304 ~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~--~~v~~~~  373 (450)
T 2vdu_B          304 DIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFPYNVISLSAHNDE--FQVTLDN  373 (450)
T ss_dssp             -CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECSSCEEEEEEETTE--EEEEECC
T ss_pred             ccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccCCceEEEEecCCc--EEEEEec
Confidence              235689999999999999998 788 999999  555   33322     23678999976  4444444

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=99.93  E-value=1.7e-24  Score=227.92  Aligned_cols=238  Identities=9%  Similarity=0.048  Sum_probs=188.0

Q ss_pred             ceeecc-CCC---ccccccccCCCcCeEEEEEcCCCCCC-EEEEEeCCCcEEEEEc-CCCceeEEEec--CCCcEEEEEE
Q psy7108          28 VKKGDM-AAR---VLKPEVLSGHEGPVSCIEFSPVLSST-GMVSASWDKTVKLWNA-VETDTQHETIQ--LLSDALCVAY   99 (703)
Q Consensus        28 v~~~d~-tg~---~~~~~~l~gH~~~V~~l~~sp~~dg~-~L~sgs~Dg~V~iWd~-~~~~~~~~~~~--~~~~V~~v~~   99 (703)
                      +++|+. +++   ..  ..+.+|...|++++|+|  +++ +|++|+.||.|++||+ .++ ....+..  |...|.+++|
T Consensus        35 v~iw~~~~~~~~~~~--~~~~~~~~~v~~~~~~~--~~~~~l~~~~~dg~i~~wd~~~~~-~~~~~~~~~~~~~v~~l~~  109 (342)
T 1yfq_A           35 LTVYKFDIQAKNVDL--LQSLRYKHPLLCCNFID--NTDLQIYVGTVQGEILKVDLIGSP-SFQALTNNEANLGICRICK  109 (342)
T ss_dssp             EEEEEEETTTTEEEE--EEEEECSSCEEEEEEEE--SSSEEEEEEETTSCEEEECSSSSS-SEEECBSCCCCSCEEEEEE
T ss_pred             EEEEEeCCCCccccc--eeeeecCCceEEEEECC--CCCcEEEEEcCCCeEEEEEeccCC-ceEeccccCCCCceEEEEe
Confidence            555663 333   14  56679999999999999  999 9999999999999999 776 4466677  9999999999


Q ss_pred             ecCCCEEEEEECCCeEEEEEcCC---------CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEE
Q psy7108         100 KPDGTEIVVATLDGQLIMFDVES---------AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILA  170 (703)
Q Consensus       100 spdg~~las~s~dg~I~vwd~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s  170 (703)
                      +| ++.+++++.|+.|++||+++         ++.+..+.                     +...|.+++|+|++  +++
T Consensus       110 ~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~---------------------~~~~v~~~~~~~~~--l~~  165 (342)
T 1yfq_A          110 YG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK---------------------VKNKIFTMDTNSSR--LIV  165 (342)
T ss_dssp             ET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS---------------------SCCCEEEEEECSSE--EEE
T ss_pred             CC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe---------------------eCCceEEEEecCCc--EEE
Confidence            99 99999999999999999875         33222221                     34589999999987  999


Q ss_pred             EecCCcEEEEECCC-CceE-EEEEeccCCccccccccceeeeecc-CCCEEEEEcccCCCCCeeEEECCCCCCC------
Q psy7108         171 AGQSKYICIYSSRE-GILL-KKFTITQNKSLDGINDFINRRKMTE-FGNVSLIETRETHEGGNVVLKLPGVKKG------  241 (703)
Q Consensus       171 ~s~dg~I~lwD~~~-~~~~-~~~~~~~~~~~~~~~~~v~~~~~sp-dg~~l~~~~~~~~~~~~~~i~iwd~~~~------  241 (703)
                      ++.|+.|++||+++ +... ....       ..+...+.+++|+| +++.+++++.++      .+++|+++..      
T Consensus       166 ~~~d~~i~i~d~~~~~~~~~~~~~-------~~~~~~i~~i~~~~~~~~~l~~~~~dg------~i~i~~~~~~~~~~~~  232 (342)
T 1yfq_A          166 GMNNSQVQWFRLPLCEDDNGTIEE-------SGLKYQIRDVALLPKEQEGYACSSIDG------RVAVEFFDDQGDDYNS  232 (342)
T ss_dssp             EESTTEEEEEESSCCTTCCCEEEE-------CSCSSCEEEEEECSGGGCEEEEEETTS------EEEEEECCTTCCSTTC
T ss_pred             EeCCCeEEEEECCccccccceeee-------cCCCCceeEEEECCCCCCEEEEEecCC------cEEEEEEcCCCccccc
Confidence            99999999999998 5432 2221       12344789999999 999999888764      8999988876      


Q ss_pred             ccceeecCCcc---------ceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceeccee-------eeEEEccchhhhHhh
Q psy7108         242 DMAARVLKPEV---------RVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPFL-------LDISITPQSVKEALA  304 (703)
Q Consensus       242 ~~~~~~~~h~~---------~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~~-------~~~~~spd~~~~~l~  304 (703)
                      +....+..|..         .|.+++|+|++++|++++.|| |++||+.+++....+.       .+++  |++  ..++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~--~~l~  308 (342)
T 1yfq_A          233 SKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSD--NILC  308 (342)
T ss_dssp             TTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECS--SEEE
T ss_pred             ccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCC--CeEE
Confidence            66777777755         899999999999999999999 9999999887644332       3344  777  5666


Q ss_pred             cCCcceE
Q psy7108         305 DKDYAKA  311 (703)
Q Consensus       305 sg~~~~~  311 (703)
                      +++.|+.
T Consensus       309 s~s~Dg~  315 (342)
T 1yfq_A          309 LATSDDT  315 (342)
T ss_dssp             EEEECTH
T ss_pred             EEecCCc
Confidence            6666654

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=99.93  E-value=6.3e-25  Score=232.50  Aligned_cols=255  Identities=11%  Similarity=0.064  Sum_probs=188.6

Q ss_pred             ecccCCceEEecCCceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcC---------CCcee
Q psy7108          14 ETHEGGNVVLKLPGVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAV---------ETDTQ   84 (703)
Q Consensus        14 ~~~~~~~~~i~~~~v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~---------~~~~~   84 (703)
                      +...+.+..+++|++.    +++++  ..+.  ...|.++.|+|  +   +++++.|++|++|+..         ++...
T Consensus        51 l~sg~~Dg~v~iwd~~----~~~~~--~~~~--~~~v~~~~~~~--~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~  117 (343)
T 3lrv_A           51 CMCRCEDGALHFTQLK----DSKTI--TTIT--TPNPRTGGEHP--A---IISRGPCNRLLLLYPGNQITILDSKTNKVL  117 (343)
T ss_dssp             EEEEEETTEEEEEEES----SSSCE--EEEE--EECCCTTCCCC--S---EEEECSTTEEEEEETTTEEEEEETTTCCEE
T ss_pred             EEEECCCCcEEEEECC----CCcEE--EEEe--cCCceeeeeCC--c---eEEecCCCeEEEEEccCceEEeecCCccee
Confidence            3444555666666654    67777  6665  57888999999  6   9999999999999765         33323


Q ss_pred             EEEe-cCCCcEEEEEEec--CCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEE
Q psy7108          85 HETI-QLLSDALCVAYKP--DGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCY  161 (703)
Q Consensus        85 ~~~~-~~~~~V~~v~~sp--dg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~  161 (703)
                      .... .|.+.|.+++|+|  +++++++++.||+|++||+++++.......+.                   ...+.+++|
T Consensus       118 ~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~-------------------~~~i~~~~~  178 (343)
T 3lrv_A          118 REIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKS-------------------DVEYSSGVL  178 (343)
T ss_dssp             EEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCS-------------------SCCCCEEEE
T ss_pred             EEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCC-------------------CCceEEEEE
Confidence            3332 4668899999999  99999999999999999999998866654432                   236899999


Q ss_pred             cCCCCEEEEEecCCcEEEEECCCCceE-EEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCC
Q psy7108         162 SADGSCILAAGQSKYICIYSSREGILL-KKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKK  240 (703)
Q Consensus       162 spdg~~l~s~s~dg~I~lwD~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~  240 (703)
                      +|++++|++|+.|+.|++||+++++.. ..+..       +|...|.+++|+|+|.++++++.+       .|++||+++
T Consensus       179 ~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~-------~h~~~v~~l~fs~~g~~l~s~~~~-------~v~iwd~~~  244 (343)
T 3lrv_A          179 HKDSLLLALYSPDGILDVYNLSSPDQASSRFPV-------DEEAKIKEVKFADNGYWMVVECDQ-------TVVCFDLRK  244 (343)
T ss_dssp             CTTSCEEEEECTTSCEEEEESSCTTSCCEECCC-------CTTSCEEEEEECTTSSEEEEEESS-------BEEEEETTS
T ss_pred             CCCCCEEEEEcCCCEEEEEECCCCCCCccEEec-------cCCCCEEEEEEeCCCCEEEEEeCC-------eEEEEEcCC
Confidence            999999999999999999999998876 55543       145599999999999999887732       699999999


Q ss_pred             CccceeecC---CccceE--EEEEcCCCCEEEEEeC-CC-EEEEEcCCCcee-c-ceeeeEEEcc---chhhhHhhcCCc
Q psy7108         241 GDMAARVLK---PEVRVF--CVKFSPTGQAWVAATT-EG-VHIYSLDSGYVF-D-PFLLDISITP---QSVKEALADKDY  308 (703)
Q Consensus       241 ~~~~~~~~~---h~~~V~--~l~~spdg~~l~s~s~-Dg-v~iwd~~~~~~~-~-~~~~~~~~sp---d~~~~~l~sg~~  308 (703)
                      ++....+..   |...+.  +++|+|+|++|++++. |+ +++|++.+.... . .....+.|++   +.  ..+..++.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~  322 (343)
T 3lrv_A          245 DVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTKDEESALCLQSDTADF--TDMDVVCG  322 (343)
T ss_dssp             STTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEEEEEEECCC----CCC--CEEEEEEE
T ss_pred             CCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceEecCceeEecCcccccc--ceeEEEec
Confidence            877655443   434444  6999999999999988 88 999998665431 1 1123456666   44  45666666


Q ss_pred             ceEEEEEE
Q psy7108         309 AKALMMSL  316 (703)
Q Consensus       309 ~~~l~la~  316 (703)
                      ++.+.+.+
T Consensus       323 d~~~~~~~  330 (343)
T 3lrv_A          323 DGGIAAIL  330 (343)
T ss_dssp             TTEEEEEE
T ss_pred             CCceEEEE
Confidence            66666633

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=99.93  E-value=2.7e-24  Score=235.17  Aligned_cols=210  Identities=14%  Similarity=0.191  Sum_probs=173.2

Q ss_pred             CCccccccccCCCcCeEEEEEcCCCCCC-EEEEEeCCCcEEEEEcCCCce-------eEEEecCCCcEEEEEEec-CCCE
Q psy7108          35 ARVLKPEVLSGHEGPVSCIEFSPVLSST-GMVSASWDKTVKLWNAVETDT-------QHETIQLLSDALCVAYKP-DGTE  105 (703)
Q Consensus        35 g~~~~~~~l~gH~~~V~~l~~sp~~dg~-~L~sgs~Dg~V~iWd~~~~~~-------~~~~~~~~~~V~~v~~sp-dg~~  105 (703)
                      .+.+  ..+.+|.+.|++++|+|  ++. +|++|+.||+|++|++.++..       ......|...|.+++|+| ++..
T Consensus       171 ~~~~--~~~~~h~~~v~~l~~~~--~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~  246 (430)
T 2xyi_A          171 CQPD--LRLRGHQKEGYGLSWNP--NLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESL  246 (430)
T ss_dssp             CCCS--EEEECCSSCCCCEEECT--TSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTE
T ss_pred             CCCc--EEecCCCCCeEEEEeCC--CCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCE
Confidence            3555  78899999999999999  777 999999999999999987432       234456889999999999 6789


Q ss_pred             EEEEECCCeEEEEEcCCC---cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCC-EEEEEecCCcEEEEE
Q psy7108         106 IVVATLDGQLIMFDVESA---AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGS-CILAAGQSKYICIYS  181 (703)
Q Consensus       106 las~s~dg~I~vwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~-~l~s~s~dg~I~lwD  181 (703)
                      |++++.|+.|++||++++   +.+..+..|.                    ..|++++|+|++. .+++|+.|+.|++||
T Consensus       247 l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~--------------------~~v~~i~~~p~~~~~l~tg~~dg~v~vwd  306 (430)
T 2xyi_A          247 FGSVADDQKLMIWDTRNNNTSKPSHTVDAHT--------------------AEVNCLSFNPYSEFILATGSADKTVALWD  306 (430)
T ss_dssp             EEEEETTSEEEEEETTCSCSSSCSEEEECCS--------------------SCEEEEEECSSCTTEEEEEETTSEEEEEE
T ss_pred             EEEEeCCCeEEEEECCCCCCCcceeEeecCC--------------------CCeEEEEeCCCCCCEEEEEeCCCeEEEEe
Confidence            999999999999999977   4555555554                    3899999999987 688999999999999


Q ss_pred             CCC-CceEEEEEeccCCccccccccceeeeeccCCCE-EEEEcccCCCCCeeEEECCCCCC--------------Cccce
Q psy7108         182 SRE-GILLKKFTITQNKSLDGINDFINRRKMTEFGNV-SLIETRETHEGGNVVLKLPGVKK--------------GDMAA  245 (703)
Q Consensus       182 ~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~-l~~~~~~~~~~~~~~i~iwd~~~--------------~~~~~  245 (703)
                      +++ ..++..+..+.        ..|.+++|+|+++. +++++.+      +.|++||+..              .+.+.
T Consensus       307 ~~~~~~~~~~~~~h~--------~~v~~i~~sp~~~~~l~s~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~  372 (430)
T 2xyi_A          307 LRNLKLKLHSFESHK--------DEIFQVQWSPHNETILASSGTD------RRLHVWDLSKIGEEQSTEDAEDGPPELLF  372 (430)
T ss_dssp             TTCTTSCSEEEECCS--------SCEEEEEECSSCTTEEEEEETT------SCCEEEEGGGTTCCCCHHHHHHCCTTEEE
T ss_pred             CCCCCCCeEEeecCC--------CCEEEEEECCCCCCEEEEEeCC------CcEEEEeCCCCccccCccccccCCcceEE
Confidence            998 55666666443        48999999999975 5555444      3799999987              24555


Q ss_pred             eecCCccceEEEEEcCCCC-EEEEEeCCC-EEEEEcCCC
Q psy7108         246 RVLKPEVRVFCVKFSPTGQ-AWVAATTEG-VHIYSLDSG  282 (703)
Q Consensus       246 ~~~~h~~~V~~l~~spdg~-~l~s~s~Dg-v~iwd~~~~  282 (703)
                      ...+|...|.+++|+|+++ .+++++.|+ |+||++...
T Consensus       373 ~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~  411 (430)
T 2xyi_A          373 IHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN  411 (430)
T ss_dssp             ECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred             EcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence            6668899999999999999 889999999 999998754

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.93  E-value=2e-24  Score=222.42  Aligned_cols=201  Identities=9%  Similarity=0.131  Sum_probs=148.8

Q ss_pred             CeEEEEEcCCCC----CCEEEEEeC--------------------CCcEEEEEcC-CCceeEEEecCCCcEEEEEEec--
Q psy7108          49 PVSCIEFSPVLS----STGMVSASW--------------------DKTVKLWNAV-ETDTQHETIQLLSDALCVAYKP--  101 (703)
Q Consensus        49 ~V~~l~~sp~~d----g~~L~sgs~--------------------Dg~V~iWd~~-~~~~~~~~~~~~~~V~~v~~sp--  101 (703)
                      .|++++++|  +    ++.+++++.                    |+.|++|++. +++.......|...+..++|+|  
T Consensus       113 ~v~sla~sp--d~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~  190 (356)
T 2w18_A          113 EIRALFCSS--DDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQ  190 (356)
T ss_dssp             EEEEECC--------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEE
T ss_pred             ceEEEEECC--CccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccC
Confidence            455666666  7    777777653                    8888999984 4555566667888888999998  


Q ss_pred             -CCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEE------------
Q psy7108         102 -DGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCI------------  168 (703)
Q Consensus       102 -dg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l------------  168 (703)
                       ++..|++++.|++|++||+++++.+.++.++..                 +...+.+++|+|+|+.+            
T Consensus       191 g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~-----------------~v~~v~~vafSpdG~~lvs~s~~~~~w~l  253 (356)
T 2w18_A          191 GMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDS-----------------YQASVCHKAYSEMGLLFIVLSHPCAKESE  253 (356)
T ss_dssp             TSTTEEEEEETTSEEEEEETTTCCEEEEEECCC--------------------CCCEEEEEEETTEEEEEEC--------
T ss_pred             CCCceEEEecCCCcEEEEECCCCcEEEEEcCCCc-----------------ceeeeEEEEECCCCCEEEEeccCCCccee
Confidence             779999999999999999999999999986542                 11257788999999876            


Q ss_pred             EEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeec
Q psy7108         169 LAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL  248 (703)
Q Consensus       169 ~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~  248 (703)
                      ++|+.|++|++||..+++.+..+....   .+++...+.+.  +.++..+++++.++      +|++||+.+++++..+.
T Consensus       254 aSGs~D~tIklWd~~tgk~l~v~~~~~---p~Gh~~~~lsg--~~sg~~lASgS~Dg------TIkIWDl~tGk~l~tL~  322 (356)
T 2w18_A          254 SLRSPVFQLIVINPKTTLSVGVMLYCL---PPGQAGRFLEG--DVKDHCAAAILTSG------TIAIWDLLLGQCTALLP  322 (356)
T ss_dssp             ----CCEEEEEEETTTTEEEEEEEECC---CTTCCCCEEEE--EEETTEEEEEETTS------CEEEEETTTCSEEEEEC
T ss_pred             eccCCCcEEEEEECCCCEEEEEEEeec---cCCCcceeEcc--ccCCCEEEEEcCCC------cEEEEECCCCcEEEEec
Confidence            567789999999999998877654221   12332233222  33366667666553      89999999999999999


Q ss_pred             CCccceE-EEEEcCCCCEEEEEeCCC-EEEEEc
Q psy7108         249 KPEVRVF-CVKFSPTGQAWVAATTEG-VHIYSL  279 (703)
Q Consensus       249 ~h~~~V~-~l~~spdg~~l~s~s~Dg-v~iwd~  279 (703)
                      +|...+. .++|||||++|++|+.|+ |+|||.
T Consensus       323 gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~  355 (356)
T 2w18_A          323 PVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY  355 (356)
T ss_dssp             CC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred             CCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence            8887665 589999999999999999 999985

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=99.92  E-value=8e-24  Score=232.29  Aligned_cols=242  Identities=16%  Similarity=0.259  Sum_probs=208.1

Q ss_pred             ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEE
Q psy7108          28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEI  106 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~l  106 (703)
                      +++|| .+++++  ..+.+|.+.|.+++|++    +.+++|+.||+|++||+.+++.......|...|.+++|+  ++.+
T Consensus       141 i~vwd~~~~~~~--~~~~~h~~~v~~~~~~~----~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l  212 (445)
T 2ovr_B          141 LKVWSAVTGKCL--RTLVGHTGGVWSSQMRD----NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRV  212 (445)
T ss_dssp             EEEEETTTCCEE--EECCCCSSCEEEEEEET----TEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEE
T ss_pred             EEEEECCCCcEE--EEEcCCCCCEEEEEecC----CEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEE
Confidence            66777 578888  89999999999999975    699999999999999999998777788899999999996  5789


Q ss_pred             EEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCc
Q psy7108         107 VVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGI  186 (703)
Q Consensus       107 as~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~  186 (703)
                      ++|+.||.|++||+++++.+..+.+|..                    .|.+++|  +++.+++++.|+.|++||+++++
T Consensus       213 ~s~s~dg~i~~wd~~~~~~~~~~~~~~~--------------------~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~  270 (445)
T 2ovr_B          213 VSGSRDATLRVWDIETGQCLHVLMGHVA--------------------AVRCVQY--DGRRVVSGAYDFMVKVWDPETET  270 (445)
T ss_dssp             EEEETTSEEEEEESSSCCEEEEEECCSS--------------------CEEEEEE--CSSCEEEEETTSCEEEEEGGGTE
T ss_pred             EEEeCCCEEEEEECCCCcEEEEEcCCcc--------------------cEEEEEE--CCCEEEEEcCCCEEEEEECCCCc
Confidence            9999999999999999999988888765                    8999998  68899999999999999999999


Q ss_pred             eEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEE
Q psy7108         187 LLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAW  266 (703)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l  266 (703)
                      ++..+..+.        ..+.++.+  ++..+++++.++      .|++||+++++....+.+|...+.++.++  ++++
T Consensus       271 ~~~~~~~~~--------~~v~~~~~--~~~~l~~~~~d~------~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l  332 (445)
T 2ovr_B          271 CLHTLQGHT--------NRVYSLQF--DGIHVVSGSLDT------SIRVWDVETGNCIHTLTGHQSLTSGMELK--DNIL  332 (445)
T ss_dssp             EEEEECCCS--------SCEEEEEE--CSSEEEEEETTS------CEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEE
T ss_pred             EeEEecCCC--------CceEEEEE--CCCEEEEEeCCC------eEEEEECCCCCEEEEEcCCcccEEEEEEe--CCEE
Confidence            888876544        37888888  788888887764      79999999999999999999999888774  6799


Q ss_pred             EEEeCCC-EEEEEcCCCceeccee---------eeEEEccchhhhHhhcCCcceEEEEEEecCchh
Q psy7108         267 VAATTEG-VHIYSLDSGYVFDPFL---------LDISITPQSVKEALADKDYAKALMMSLKLNEQG  322 (703)
Q Consensus       267 ~s~s~Dg-v~iwd~~~~~~~~~~~---------~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~~  322 (703)
                      ++++.|| |++||+.+++....+.         .+++++  +  ..+++++.++.+.+ |++....
T Consensus       333 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~--~~l~s~~~dg~v~i-wd~~~~~  393 (445)
T 2ovr_B          333 VSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--K--NFVITSSDDGTVKL-WDLKTGE  393 (445)
T ss_dssp             EEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--S--SEEEEEETTSEEEE-EETTTCC
T ss_pred             EEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--C--CEEEEEeCCCeEEE-EECCCCc
Confidence            9999999 9999999887754442         345664  4  57889999999999 9987653

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=99.92  E-value=7.6e-24  Score=262.26  Aligned_cols=242  Identities=13%  Similarity=0.215  Sum_probs=211.3

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEc
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDV  120 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~  120 (703)
                      ..+.+|.+.|++++|+|  ++++|++|+.||+|++||+.+++....+..|.+.|.+++|+|+|++|++++.|++|++||+
T Consensus       609 ~~~~~h~~~v~~~~~s~--~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~  686 (1249)
T 3sfz_A          609 LVVRPHTDAVYHACFSQ--DGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDS  686 (1249)
T ss_dssp             EEECCCSSCEEEEEECT--TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred             EEEecccccEEEEEECC--CCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEEC
Confidence            56789999999999999  9999999999999999999999888888889999999999999999999999999999999


Q ss_pred             CCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC--CCCEEEEEecCCcEEEEECCCCceEEEEEeccCCc
Q psy7108         121 ESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA--DGSCILAAGQSKYICIYSSREGILLKKFTITQNKS  198 (703)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp--dg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~  198 (703)
                      .+++.+..+.+|..                    .|.+++|+|  ++..+++|+.|+.|++||++++++...+..|.   
T Consensus       687 ~~~~~~~~~~~~~~--------------------~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~---  743 (1249)
T 3sfz_A          687 ATGKLVHTYDEHSE--------------------QVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHT---  743 (1249)
T ss_dssp             TTCCEEEEEECCSS--------------------CEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCS---
T ss_pred             CCCceEEEEcCCCC--------------------cEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCC---
Confidence            99999999988765                    899999999  55689999999999999999999888876544   


Q ss_pred             cccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC-------------CccceEEEEEcCCCCE
Q psy7108         199 LDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK-------------PEVRVFCVKFSPTGQA  265 (703)
Q Consensus       199 ~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~-------------h~~~V~~l~~spdg~~  265 (703)
                           ..|.+++|+|+++.+++++.++      .|++||+.+++....+..             ....+.+++|+|+|+.
T Consensus       744 -----~~v~~~~~sp~~~~l~s~s~dg------~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~  812 (1249)
T 3sfz_A          744 -----NSVNHCRFSPDDELLASCSADG------TLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDK  812 (1249)
T ss_dssp             -----SCEEEEEECSSTTEEEEEESSS------EEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSE
T ss_pred             -----CCEEEEEEecCCCEEEEEECCC------eEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCE
Confidence                 4899999999999999888764      899999998865544331             2336889999999999


Q ss_pred             EEEEeCCCEEEEEcCCCceecce-------eeeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108         266 WVAATTEGVHIYSLDSGYVFDPF-------LLDISITPQSVKEALADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       266 l~s~s~Dgv~iwd~~~~~~~~~~-------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~  321 (703)
                      +++++.+.+.+|++.++......       ...++|+|++  ..+++++.++.+.+ |++...
T Consensus       813 l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~--~~l~~~~~dg~v~v-wd~~~~  872 (1249)
T 3sfz_A          813 IIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYD--HLAVIALSQYCVEL-WNIDSR  872 (1249)
T ss_dssp             EEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSST--TEEEEECSSSCEEE-EETTTT
T ss_pred             EEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCC--CEEEEEeCCCeEEE-EEcCCC
Confidence            99988555999999988765443       3568999999  88899999999998 887754

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=99.92  E-value=2.9e-24  Score=232.48  Aligned_cols=236  Identities=14%  Similarity=0.158  Sum_probs=191.1

Q ss_pred             CeEEEEEcCCCCCC-EEEEEeCCCcEEEEEcCCCce----eEEEecCCCcEEEEEEec-CCCEEEEEECCCeEEEEEcCC
Q psy7108          49 PVSCIEFSPVLSST-GMVSASWDKTVKLWNAVETDT----QHETIQLLSDALCVAYKP-DGTEIVVATLDGQLIMFDVES  122 (703)
Q Consensus        49 ~V~~l~~sp~~dg~-~L~sgs~Dg~V~iWd~~~~~~----~~~~~~~~~~V~~v~~sp-dg~~las~s~dg~I~vwd~~~  122 (703)
                      ....++++|  +.. ++++++.||.|++|++.....    ...+..|.+.|.+++|+| ++++|++|+.||.|++||+.+
T Consensus        36 ~~~~~~~~~--~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~  113 (402)
T 2aq5_A           36 DSGFCAVNP--KFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPD  113 (402)
T ss_dssp             SSCSEEECS--SEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCT
T ss_pred             CCCcEEECC--CeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccC
Confidence            445688998  554 444678999999999966532    233456999999999999 999999999999999999998


Q ss_pred             C-------cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCC-CEEEEEecCCcEEEEECCCCceEEEEEec
Q psy7108         123 A-------AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADG-SCILAAGQSKYICIYSSREGILLKKFTIT  194 (703)
Q Consensus       123 ~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg-~~l~s~s~dg~I~lwD~~~~~~~~~~~~~  194 (703)
                      +       +.+..+.+|..                    .|.+++|+|++ +.|++++.|+.|++||+++++.+..+.  
T Consensus       114 ~~~~~~~~~~~~~~~~h~~--------------------~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--  171 (402)
T 2aq5_A          114 GGLVLPLREPVITLEGHTK--------------------RVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLG--  171 (402)
T ss_dssp             TCCSSCBCSCSEEEECCSS--------------------CEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEEC--
T ss_pred             CCCccccCCceEEecCCCC--------------------eEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEe--
Confidence            7       45566666554                    89999999998 699999999999999999998887762  


Q ss_pred             cCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceee-cCCccc-eEEEEEcCCCCEEEEE---
Q psy7108         195 QNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARV-LKPEVR-VFCVKFSPTGQAWVAA---  269 (703)
Q Consensus       195 ~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~-~~h~~~-V~~l~~spdg~~l~s~---  269 (703)
                          ..+|...|.+++|+|+++.+++++.++      .|++||+++++.+..+ ..|... +.+++|+|++++++++   
T Consensus       172 ----~~~~~~~v~~~~~~~~~~~l~~~~~d~------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~  241 (402)
T 2aq5_A          172 ----PDVHPDTIYSVDWSRDGALICTSCRDK------RVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSR  241 (402)
T ss_dssp             ----TTTCCSCEEEEEECTTSSCEEEEETTS------EEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECT
T ss_pred             ----cCCCCCceEEEEECCCCCEEEEEecCC------cEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccC
Confidence                023445899999999999999888764      8999999999888887 677765 8999999999999999   


Q ss_pred             eCCC-EEEEEcCCCce-e-------cceeeeEEEccchhhhHh-hcCCcceEEEEEEecCch
Q psy7108         270 TTEG-VHIYSLDSGYV-F-------DPFLLDISITPQSVKEAL-ADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       270 s~Dg-v~iwd~~~~~~-~-------~~~~~~~~~spd~~~~~l-~sg~~~~~l~la~~l~~~  321 (703)
                      +.|+ |++||+.++.. .       ......++|+|++  ..+ .+++.++.+.+ |++...
T Consensus       242 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~--~~l~~~g~~dg~i~i-~d~~~~  300 (402)
T 2aq5_A          242 MSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDT--NIVYLCGKGDSSIRY-FEITSE  300 (402)
T ss_dssp             TCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTT--TEEEEEETTCSCEEE-EEECSS
T ss_pred             CCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCC--CEEEEEEcCCCeEEE-EEecCC
Confidence            7888 99999987654 1       1123568999998  555 46777899998 887654

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.92  E-value=7.2e-23  Score=220.10  Aligned_cols=258  Identities=13%  Similarity=0.191  Sum_probs=203.5

Q ss_pred             cccCCceEEecCCceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEE-EEEeCCCcEEEEEcCCCceeEEEecCCCc
Q psy7108          15 THEGGNVVLKLPGVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGM-VSASWDKTVKLWNAVETDTQHETIQLLSD   93 (703)
Q Consensus        15 ~~~~~~~~i~~~~v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L-~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~   93 (703)
                      ...+.+..+++|+..    +++++  ..+.+|. .+.+++|+|  +++.+ ++++.|++|++||+.+++.... ..+...
T Consensus         6 vs~~~d~~v~v~d~~----~~~~~--~~~~~~~-~~~~~~~s~--dg~~l~~~~~~d~~i~v~d~~~~~~~~~-~~~~~~   75 (391)
T 1l0q_A            6 IANSESDNISVIDVT----SNKVT--ATIPVGS-NPMGAVISP--DGTKVYVANAHSNDVSIIDTATNNVIAT-VPAGSS   75 (391)
T ss_dssp             EEETTTTEEEEEETT----TTEEE--EEEECSS-SEEEEEECT--TSSEEEEEEGGGTEEEEEETTTTEEEEE-EECSSS
T ss_pred             EEcCCCCEEEEEECC----CCeEE--EEeecCC-CcceEEECC--CCCEEEEECCCCCeEEEEECCCCeEEEE-EECCCC
Confidence            334455566766654    67777  7787775 489999999  99876 6777999999999988855444 444559


Q ss_pred             EEEEEEecCCCEEEEEE-CCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEE-EEE
Q psy7108          94 ALCVAYKPDGTEIVVAT-LDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCI-LAA  171 (703)
Q Consensus        94 V~~v~~spdg~~las~s-~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l-~s~  171 (703)
                      +.+++|+|+++.|++++ .++.|++||+.+++.+..+..+.                     .+.+++|+|+++.+ +++
T Consensus        76 v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~---------------------~~~~~~~s~dg~~l~~~~  134 (391)
T 1l0q_A           76 PQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGK---------------------SPLGLALSPDGKKLYVTN  134 (391)
T ss_dssp             EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS---------------------SEEEEEECTTSSEEEEEE
T ss_pred             ccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCC---------------------CcceEEECCCCCEEEEEe
Confidence            99999999999886555 57999999999999888777643                     58999999999987 677


Q ss_pred             ecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCc
Q psy7108         172 GQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPE  251 (703)
Q Consensus       172 s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~  251 (703)
                      +.|+.|++||+++++.+..+..+.         .+..++|+|+|+.+++++..+     ..|++||+++++....+. +.
T Consensus       135 ~~~~~v~~~d~~~~~~~~~~~~~~---------~~~~~~~~~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~~~~-~~  199 (391)
T 1l0q_A          135 NGDKTVSVINTVTKAVINTVSVGR---------SPKGIAVTPDGTKVYVANFDS-----MSISVIDTVTNSVIDTVK-VE  199 (391)
T ss_dssp             TTTTEEEEEETTTTEEEEEEECCS---------SEEEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEEEE-CS
T ss_pred             CCCCEEEEEECCCCcEEEEEecCC---------CcceEEECCCCCEEEEEeCCC-----CEEEEEECCCCeEEEEEe-cC
Confidence            789999999999998887776432         457899999999886654432     389999999987765554 45


Q ss_pred             cceEEEEEcCCCCEEEEEe---CCC-EEEEEcCCCceeccee-----eeEEEccchhhhHh-hcCCcceEEEEEEecCch
Q psy7108         252 VRVFCVKFSPTGQAWVAAT---TEG-VHIYSLDSGYVFDPFL-----LDISITPQSVKEAL-ADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       252 ~~V~~l~~spdg~~l~s~s---~Dg-v~iwd~~~~~~~~~~~-----~~~~~spd~~~~~l-~sg~~~~~l~la~~l~~~  321 (703)
                      ..+.+++|+|+|+++++++   .++ |++||+.+++....+.     ..++|+|++  ..+ .+++.++.+.+ |++...
T Consensus       200 ~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg--~~l~~s~~~d~~v~v-~d~~~~  276 (391)
T 1l0q_A          200 AAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDG--KKVYVALSFXNTVSV-IDTATN  276 (391)
T ss_dssp             SEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSSEEEEEECTTS--SEEEEEETTTTEEEE-EETTTT
T ss_pred             CCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCCccEEEEccCC--CEEEEEcCCCCEEEE-EECCCC
Confidence            6789999999999998887   577 9999999887654443     568999998  544 66677888888 887754

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=99.92  E-value=5.3e-24  Score=249.56  Aligned_cols=222  Identities=15%  Similarity=0.250  Sum_probs=180.5

Q ss_pred             ceeecc---CCCccccccccCCCcCeEEEEEcCCCC--CCEEEEEeCCCcEEEEEcCCCc--eeEEEecCCCcEEEEEEe
Q psy7108          28 VKKGDM---AARVLKPEVLSGHEGPVSCIEFSPVLS--STGMVSASWDKTVKLWNAVETD--TQHETIQLLSDALCVAYK  100 (703)
Q Consensus        28 v~~~d~---tg~~~~~~~l~gH~~~V~~l~~sp~~d--g~~L~sgs~Dg~V~iWd~~~~~--~~~~~~~~~~~V~~v~~s  100 (703)
                      +++|+.   +++++  ..+.+|.++|++++|+|  +  +++|++|+.||+|++||+.++.  .......|...|.+++|+
T Consensus        33 I~vwd~~~~~~~~~--~~l~~h~~~V~~l~~s~--~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~s  108 (753)
T 3jro_A           33 IKIFEVEGETHKLI--DTLTGHEGPVWRVDWAH--PKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWA  108 (753)
T ss_dssp             EEEEEEETTEEEEE--EEECCCSSCEEEEEECC--TTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEEC
T ss_pred             EEEEecCCCCCccc--eeccCCcCceEEEEecC--CCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEEC
Confidence            555653   45566  78899999999999998  6  9999999999999999998875  455666799999999999


Q ss_pred             cC--CCEEEEEECCCeEEEEEcCCCcE--EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC-------------
Q psy7108         101 PD--GTEIVVATLDGQLIMFDVESAAQ--VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA-------------  163 (703)
Q Consensus       101 pd--g~~las~s~dg~I~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp-------------  163 (703)
                      |+  ++.+++|+.||.|++||++++..  ...+.+|                    ...|.+++|+|             
T Consensus       109 p~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~--------------------~~~v~~l~~~p~~~~~~~~~~~~~  168 (753)
T 3jro_A          109 PHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAH--------------------AIGVNSASWAPATIEEDGEHNGTK  168 (753)
T ss_dssp             CGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECC--------------------SSCEEEEEECCCC---------CG
T ss_pred             CCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecC--------------------CCceEEEEecCcccccccccccCC
Confidence            99  99999999999999999987732  3334444                    34899999999             


Q ss_pred             CCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccC---CCEEEEEcccCCCCCeeEEECCCCCC
Q psy7108         164 DGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEF---GNVSLIETRETHEGGNVVLKLPGVKK  240 (703)
Q Consensus       164 dg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spd---g~~l~~~~~~~~~~~~~~i~iwd~~~  240 (703)
                      +++.+++|+.||.|++||++++........    .+.+|...|.+++|+|+   ++.+++++.++      .|++||+.+
T Consensus       169 d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~----~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg------~I~iwd~~~  238 (753)
T 3jro_A          169 ESRKFVTGGADNLVKIWKYNSDAQTYVLES----TLEGHSDWVRDVAWSPTVLLRSYLASVSQDR------TCIIWTQDN  238 (753)
T ss_dssp             GGCCEEEEETTSCEEEEEEETTTTEEEEEE----EECCCSSCEEEEEECCCCSSSEEEEEEESSS------CEEEEEESS
T ss_pred             CCCEEEEEECCCeEEEEeccCCcccceeee----eecCCCCcEEEEEeccCCCCCCEEEEEecCC------EEEEecCCC
Confidence            589999999999999999988743221110    12245568999999999   88888877664      899999988


Q ss_pred             Cc-----cceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCc
Q psy7108         241 GD-----MAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGY  283 (703)
Q Consensus       241 ~~-----~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~  283 (703)
                      ++     .......|...|++++|+|+|+++++++.|| |++|++.++.
T Consensus       239 ~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~  287 (753)
T 3jro_A          239 EQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG  287 (753)
T ss_dssp             SSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSSS
T ss_pred             CCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCC
Confidence            64     3333446888999999999999999999999 9999998644

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.92  E-value=1.4e-23  Score=229.54  Aligned_cols=197  Identities=12%  Similarity=0.097  Sum_probs=159.6

Q ss_pred             CCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCC-----cEEEEEEecCCCEEEEEECCCeEEEEE
Q psy7108          45 GHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLS-----DALCVAYKPDGTEIVVATLDGQLIMFD  119 (703)
Q Consensus        45 gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~-----~V~~v~~spdg~~las~s~dg~I~vwd  119 (703)
                      +|.+.|.+++|||  +|+.||+++.||+|++||.++  .... ..|..     .|.+++|||||++||+|+.||+|++||
T Consensus        83 ~~~~~V~~vawSP--dG~~LAs~s~dg~V~iwd~~~--~l~~-l~~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd  157 (588)
T 2j04_A           83 QPVCYPRVCKPSP--IDDWMAVLSNNGNVSVFKDNK--MLTN-LDSKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFS  157 (588)
T ss_dssp             SCSCCEEEEEECS--SSSCEEEEETTSCEEEEETTE--EEEE-CCCSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEE
T ss_pred             CCCCcEEEEEECC--CCCEEEEEeCCCcEEEEeCCc--eeee-ccCCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEE
Confidence            5689999999999  999999999999999999543  3333 33544     499999999999999999999999999


Q ss_pred             cCCCc-------EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCce---EE
Q psy7108         120 VESAA-------QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGIL---LK  189 (703)
Q Consensus       120 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~---~~  189 (703)
                      +.++.       .+.++..+..                +|...|.+++|+|||  +++++.|++|++||+.++..   ..
T Consensus       158 ~~~~~l~~~~~i~l~ti~~~~~----------------gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~  219 (588)
T 2j04_A          158 IRKNSENTPEFYFESSIRLSDA----------------GSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSR  219 (588)
T ss_dssp             CCCCTTTCCCCEEEEEEECSCT----------------TCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEE
T ss_pred             CCCCccccccceeeeeeecccc----------------cccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCcccccee
Confidence            99875       3566644321                244589999999999  88899999999999988763   23


Q ss_pred             EEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEE--cCCCCEEE
Q psy7108         190 KFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKF--SPTGQAWV  267 (703)
Q Consensus       190 ~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~--spdg~~l~  267 (703)
                      ++..       +|...|.+++|+  |+.+++++.       +.|++||+.+++......+|...|.+++|  +||+..++
T Consensus       220 tL~~-------~h~~~V~svaFs--g~~LASa~~-------~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La  283 (588)
T 2j04_A          220 MIQN-------ASRRKITDLKIV--DYKVVLTCP-------GYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILL  283 (588)
T ss_dssp             EEEC-------CCSSCCCCEEEE--TTEEEEECS-------SEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEE
T ss_pred             eecc-------cccCcEEEEEEE--CCEEEEEeC-------CeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEE
Confidence            4421       234589999999  677777653       28999999988774445489999999999  99999999


Q ss_pred             EEeCCCEEEEEcC
Q psy7108         268 AATTEGVHIYSLD  280 (703)
Q Consensus       268 s~s~Dgv~iwd~~  280 (703)
                      ++++||.++|..+
T Consensus       284 ~a~edG~klw~~d  296 (588)
T 2j04_A          284 MSNKTSYKVLLED  296 (588)
T ss_dssp             ECSSCEEEEEESS
T ss_pred             EEcCCCCEEEeec
Confidence            9999998888864

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=99.92  E-value=1e-23  Score=240.39  Aligned_cols=235  Identities=12%  Similarity=0.142  Sum_probs=201.1

Q ss_pred             cCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCC----ceeEEEecCCCc-EEEEEEec--CCCEEEEEECCCeEE
Q psy7108          44 SGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVET----DTQHETIQLLSD-ALCVAYKP--DGTEIVVATLDGQLI  116 (703)
Q Consensus        44 ~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~----~~~~~~~~~~~~-V~~v~~sp--dg~~las~s~dg~I~  116 (703)
                      ..|.+.|++++|+|  ++++|++++ |+.|++||+.++    +....+..|... |.+++|+|  ++++|++++.||.|+
T Consensus        15 ~~~~~~v~~~~~sp--dg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~   91 (615)
T 1pgu_A           15 STQRNFTTHLSYDP--TTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVI   91 (615)
T ss_dssp             CCCTTCCCCCEEET--TTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEE
T ss_pred             CCccCceeEEEECC--CCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEE
Confidence            46899999999999  999999998 789999999988    777888889999 99999999  999999999999999


Q ss_pred             EEEcCCC--------cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC----CcEEEEECCC
Q psy7108         117 MFDVESA--------AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS----KYICIYSSRE  184 (703)
Q Consensus       117 vwd~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d----g~I~lwD~~~  184 (703)
                      +||+.++        +....+..|..                    .|.+++|+|++++|++++.+    +.|++||  .
T Consensus        92 vw~~~~~~~~~~~~~~~~~~~~~~~~--------------------~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~  149 (615)
T 1pgu_A           92 VWGWTFDKESNSVEVNVKSEFQVLAG--------------------PISDISWDFEGRRLCVVGEGRDNFGVFISWD--S  149 (615)
T ss_dssp             EEEEEEEGGGTEEEEEEEEEEECCSS--------------------CEEEEEECTTSSEEEEEECCSSCSEEEEETT--T
T ss_pred             EEeCCCCcccccccccccchhhcccc--------------------cEEEEEEeCCCCEEEEeccCCCCccEEEEEE--C
Confidence            9999755        55556655543                    89999999999999999987    6888888  4


Q ss_pred             CceEEEEEeccCCccccccccceeeeeccCCC-EEEEEcccCCCCCeeEEECCCCCCCccceeecCCcc---ceEEEEEc
Q psy7108         185 GILLKKFTITQNKSLDGINDFINRRKMTEFGN-VSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEV---RVFCVKFS  260 (703)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~-~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~---~V~~l~~s  260 (703)
                      ++.+..+..        |...|.+++|+|+++ .+++++.+      ..+++||..+++....+..|..   .|.+++|+
T Consensus       150 ~~~~~~~~~--------~~~~v~~~~~~~~~~~~l~~~~~d------~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~  215 (615)
T 1pgu_A          150 GNSLGEVSG--------HSQRINACHLKQSRPMRSMTVGDD------GSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFS  215 (615)
T ss_dssp             CCEEEECCS--------CSSCEEEEEECSSSSCEEEEEETT------TEEEEEETTTBEEEEEECSSSCTTCCEEEEEEC
T ss_pred             CCcceeeec--------CCccEEEEEECCCCCcEEEEEeCC------CcEEEEeCCCcceeeeecccCCCCceEEEEEEC
Confidence            556655543        445899999999998 56665554      3899999999999989999998   99999999


Q ss_pred             CC-CCEEEEEeCCC-EEEEEcCCCceecce----------eeeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108         261 PT-GQAWVAATTEG-VHIYSLDSGYVFDPF----------LLDISITPQSVKEALADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       261 pd-g~~l~s~s~Dg-v~iwd~~~~~~~~~~----------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~  321 (703)
                      |+ ++++++++.|+ |++||+.+++....+          ...++|+ ++  ..+++++.++.+.+ |++...
T Consensus       216 ~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~--~~l~~~~~d~~i~~-wd~~~~  284 (615)
T 1pgu_A          216 PDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DS--QKFATVGADATIRV-WDVTTS  284 (615)
T ss_dssp             STTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SS--SEEEEEETTSEEEE-EETTTT
T ss_pred             CCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CC--CEEEEEcCCCcEEE-EECCCC
Confidence            99 99999999999 999999988765544          3568888 77  78899999999998 988754

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=99.92  E-value=1.8e-23  Score=248.93  Aligned_cols=210  Identities=12%  Similarity=0.113  Sum_probs=175.7

Q ss_pred             ccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCC
Q psy7108          43 LSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVES  122 (703)
Q Consensus        43 l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~  122 (703)
                      ..||.+.|++++|+|  ++++||+|+.||+|++|+..+.+ ......|...|.+++|+| |++|++++.|++|++||+++
T Consensus        13 ~~gh~~~V~~lafsp--dg~~lAsgs~Dg~I~lw~~~~~~-~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~   88 (902)
T 2oaj_A           13 KYGMSSKPIAAAFDF--TQNLLAIATVTGEVHIYGQQQVE-VVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYS   88 (902)
T ss_dssp             EEECSSCEEEEEEET--TTTEEEEEETTSEEEEECSTTCE-EEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTT
T ss_pred             ccCCCCCcEEEEECC--CCCEEEEEeCCCEEEEEeCCCcE-EEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCC
Confidence            358999999999999  99999999999999999987663 344456888999999999 88999999999999999999


Q ss_pred             CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccC----Cc
Q psy7108         123 AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQN----KS  198 (703)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~----~~  198 (703)
                      ++.+..+..+ .                    .|++++|+|++++|++|+.||.|++||++++++. .+..+..    ..
T Consensus        89 ~~~~~~~~~~-~--------------------~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~-~~~i~~~~~~~~~  146 (902)
T 2oaj_A           89 QKVLTTVFVP-G--------------------KITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLS-SFKLDNLQKSSFF  146 (902)
T ss_dssp             CSEEEEEECS-S--------------------CEEEEECCTTCSEEEEEETTSCEEEEETTTTEEE-EEEECCHHHHHTC
T ss_pred             CcEEEEEcCC-C--------------------CEEEEEECCCCCEEEEEcCCCcEEEEECCCCccc-cceeccccccccc
Confidence            9988877532 2                    7999999999999999999999999999988763 3322110    23


Q ss_pred             cccccccceeeeeccCC-CEEEEEcccCCCCCeeEEECCCCCCCccceeecCC------------------ccceEEEEE
Q psy7108         199 LDGINDFINRRKMTEFG-NVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKP------------------EVRVFCVKF  259 (703)
Q Consensus       199 ~~~~~~~v~~~~~spdg-~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h------------------~~~V~~l~~  259 (703)
                      ..+|...|.+++|+|++ ..+++++.+      ..+ +||+++++....+..|                  ...|.+++|
T Consensus       147 ~~~h~~~V~sl~~sp~~~~~l~~g~~d------g~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~f  219 (902)
T 2oaj_A          147 PAARLSPIVSIQWNPRDIGTVLISYEY------VTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLY  219 (902)
T ss_dssp             SSSCCCCCCEEEEETTEEEEEEEECSS------CEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEE
T ss_pred             cccCCCCeEEEEEccCCCCEEEEEeCC------CcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEE
Confidence            45677899999999975 566665554      378 9999998877766654                  467999999


Q ss_pred             cCCCCEEEEEeCCC-EEEEEcCCCcee
Q psy7108         260 SPTGQAWVAATTEG-VHIYSLDSGYVF  285 (703)
Q Consensus       260 spdg~~l~s~s~Dg-v~iwd~~~~~~~  285 (703)
                      +|+|++|++++.|+ |++||+.+++.+
T Consensus       220 spdg~~lasgs~Dg~i~lWd~~~g~~~  246 (902)
T 2oaj_A          220 HPNSLHIITIHEDNSLVFWDANSGHMI  246 (902)
T ss_dssp             CTTSSEEEEEETTCCEEEEETTTCCEE
T ss_pred             cCCCCEEEEEECCCeEEEEECCCCcEE
Confidence            99999999999999 999999887754

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=99.92  E-value=5.1e-24  Score=230.15  Aligned_cols=239  Identities=11%  Similarity=0.030  Sum_probs=160.8

Q ss_pred             CCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEE-----EecCCCcEEEEEEec--------CCCEEEEEECC
Q psy7108          46 HEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHE-----TIQLLSDALCVAYKP--------DGTEIVVATLD  112 (703)
Q Consensus        46 H~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~-----~~~~~~~V~~v~~sp--------dg~~las~s~d  112 (703)
                      |...+....+.+  ++.+|++|+.|++|+|||+.+++....     ..+|.+.|.+++|+|        |+++||+|+.|
T Consensus        88 ~~~~~~~~~~~~--~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D  165 (393)
T 4gq1_A           88 HDGDGNVNSSPV--YSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDD  165 (393)
T ss_dssp             ---------CCE--EEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETT
T ss_pred             cCCCcceeecCC--CCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECC
Confidence            344444444455  677899999999999999988754332     235899999999998        88999999999


Q ss_pred             CeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCC-EEEEEecCCcEEEEECCCCceEEEE
Q psy7108         113 GQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGS-CILAAGQSKYICIYSSREGILLKKF  191 (703)
Q Consensus       113 g~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~-~l~s~s~dg~I~lwD~~~~~~~~~~  191 (703)
                      ++|++||++++.....+..|..                    .|.+++|+|++. +|++++.|++|++||+++++.....
T Consensus       166 ~tv~~Wd~~~~~~~~~~~~~~~--------------------~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~  225 (393)
T 4gq1_A          166 CTLIIWRLTDEGPILAGYPLSS--------------------PGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEEN  225 (393)
T ss_dssp             SEEEEEEEETTEEEEEEEECSS--------------------CEEEEEEETTEEEEEEEEETTSEEEEEETTCCC-----
T ss_pred             CeEEEEECCCCceeeeecCCCC--------------------CcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccc
Confidence            9999999998888777777655                    899999999874 7999999999999999988765443


Q ss_pred             EeccC-----------------Cccccccccceeeeec-cCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccc
Q psy7108         192 TITQN-----------------KSLDGINDFINRRKMT-EFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVR  253 (703)
Q Consensus       192 ~~~~~-----------------~~~~~~~~~v~~~~~s-pdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~  253 (703)
                      ..+..                 ....++...+.++.|+ ++|+.++.++.++      .+++||+..++....+..|...
T Consensus       226 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~------~i~vwd~~~~~~~~~l~~~~~~  299 (393)
T 4gq1_A          226 SQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSG------AWLRWNLFANNDYNEISDSTMK  299 (393)
T ss_dssp             -----CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTS------EEEEEEC---------------
T ss_pred             cccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCC------CEEEEECccCCCCceEeeecCc
Confidence            32111                 1123566788888886 8999988877663      8999999888766666555554


Q ss_pred             eEEEEEcC--------------------CCCEEEEEeCCC-EEEEEcCCCceecc------eeeeEEEccchhhhHhhcC
Q psy7108         254 VFCVKFSP--------------------TGQAWVAATTEG-VHIYSLDSGYVFDP------FLLDISITPQSVKEALADK  306 (703)
Q Consensus       254 V~~l~~sp--------------------dg~~l~s~s~Dg-v~iwd~~~~~~~~~------~~~~~~~spd~~~~~l~sg  306 (703)
                      +..+.++|                    ++.++++|+.|| |++||+.+++....      .+.+++|+|||  ..|+.+
T Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG--~~LA~a  377 (393)
T 4gq1_A          300 LGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDG--SHLAIA  377 (393)
T ss_dssp             ----CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTS--SEEEEE
T ss_pred             cccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCC--CEEEEE
Confidence            44443333                    233567788899 99999998876433      34689999999  888888


Q ss_pred             CcceEEEE
Q psy7108         307 DYAKALMM  314 (703)
Q Consensus       307 ~~~~~l~l  314 (703)
                      +.++.+.+
T Consensus       378 s~~Gv~lv  385 (393)
T 4gq1_A          378 TEGSVLLT  385 (393)
T ss_dssp             ESSEEEEE
T ss_pred             eCCCeEEE
Confidence            87665443

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=99.92  E-value=1.3e-23  Score=223.71  Aligned_cols=269  Identities=9%  Similarity=0.074  Sum_probs=177.2

Q ss_pred             CCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEE-EEEECC
Q psy7108          34 AARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEI-VVATLD  112 (703)
Q Consensus        34 tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~l-as~s~d  112 (703)
                      +.+.+  ..+.+|.+.|++++|+|  ||++|++|+.|+ +++|++.+......  .+...+..+++.++++.+ ++++.|
T Consensus         8 ~~~~~--~~~~~h~~~V~~v~fs~--dg~~la~g~~~~-~~iw~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~d   80 (355)
T 3vu4_A            8 TRNPI--VPENHVSNPVTDYEFNQ--DQSCLILSTLKS-FEIYNVHPVAHIMS--QEMRHLSKVRMLHRTNYVAFVTGVK   80 (355)
T ss_dssp             -------------CCCCCEEEECT--TSSEEEEECSSE-EEEEEETTEEEEEE--EECSCCCEEEECTTSSEEEEECSST
T ss_pred             ccCCc--cccccCCCceEEEEECC--CCCEEEEEcCCE-EEEEecCCcceeee--eecCCeEEEEEcCCCCEEEEEECCc
Confidence            34555  67789999999999999  999999998775 78999877643332  222357888999998887 456778


Q ss_pred             CeEEEEEcCCCcEEEEEeccccCCCCCCCCccc--------------hhhccc--CCccEEEEEEcCCCCEEEE--EecC
Q psy7108         113 GQLIMFDVESAAQVGSVEARRDLDSGRLDTDLV--------------TREQSL--KAKAVSTVCYSADGSCILA--AGQS  174 (703)
Q Consensus       113 g~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~--~~~~V~~i~~spdg~~l~s--~s~d  174 (703)
                      ++|++||..+++.+..+..+..+..-....+..              ......  .......+++++  ..+++  |+.|
T Consensus        81 ~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~--~~la~~sg~~~  158 (355)
T 3vu4_A           81 EVVHIWDDVKKQDVSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSN--GLLVYSNEFNL  158 (355)
T ss_dssp             TEEEEEETTTTEEEEEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEET--TEEEEEESSCT
T ss_pred             cEEEEEECCCCcEEEEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEc--cEEEEeCCCcC
Confidence            999999999999888776433110000000000              000000  000223344454  45555  4678


Q ss_pred             CcEEEEECCCCceEEEEEec-------c-CCccccccccceeeeeccCCCEEEEEcccCCCCCeeE-EECCCCCCCccce
Q psy7108         175 KYICIYSSREGILLKKFTIT-------Q-NKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVV-LKLPGVKKGDMAA  245 (703)
Q Consensus       175 g~I~lwD~~~~~~~~~~~~~-------~-~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~-i~iwd~~~~~~~~  245 (703)
                      |.|++||++++.........       . ...+.+|...|.+++|+|+|+++++++.++      + |++||+++++++.
T Consensus       159 g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~------~~v~iwd~~~~~~~~  232 (355)
T 3vu4_A          159 GQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDG------TIIRVFKTEDGVLVR  232 (355)
T ss_dssp             TCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTC------SEEEEEETTTCCEEE
T ss_pred             cEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCC------CEEEEEECCCCcEEE
Confidence            88888888876421100000       0 122345667999999999999999988764      6 9999999999998


Q ss_pred             eec-C-CccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecce-----------------------------eeeEE
Q psy7108         246 RVL-K-PEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPF-----------------------------LLDIS  293 (703)
Q Consensus       246 ~~~-~-h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~-----------------------------~~~~~  293 (703)
                      .+. + |...|.+++|+|+|++|++++.|+ |++|++..+......                             ...++
T Consensus       233 ~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  312 (355)
T 3vu4_A          233 EFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIA  312 (355)
T ss_dssp             EEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEE
T ss_pred             EEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEE
Confidence            887 5 999999999999999999999999 999999765321100                             14478


Q ss_pred             EccchhhhHhhcCCcceEEEEEEecCc
Q psy7108         294 ITPQSVKEALADKDYAKALMMSLKLNE  320 (703)
Q Consensus       294 ~spd~~~~~l~sg~~~~~l~la~~l~~  320 (703)
                      |++++  ..++.+..++.+.. |.+..
T Consensus       313 ~~~d~--~~l~~~~~dg~~~~-~~~~~  336 (355)
T 3vu4_A          313 WISES--SLVVVWPHTRMIET-FKVVF  336 (355)
T ss_dssp             ESSSS--EEEEEETTTTEEEE-EEEEE
T ss_pred             EeCCC--CEEEEEeCCCeEEE-EEEEc
Confidence            99998  77888888888776 66543

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=99.92  E-value=6.1e-23  Score=223.64  Aligned_cols=234  Identities=12%  Similarity=0.119  Sum_probs=188.6

Q ss_pred             eeecccCCceEEecCC--ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCce-eEEE
Q psy7108          12 TRETHEGGNVVLKLPG--VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDT-QHET   87 (703)
Q Consensus        12 ~~~~~~~~~~~i~~~~--v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~-~~~~   87 (703)
                      ..+..+|...+....+  +++|| .+++++  +.+.+|...|.++++++    ..|++|+.|+.+++||...... ....
T Consensus       153 v~fspdg~~lasgs~Dg~v~iWd~~~~~~~--~~~~~h~~~v~~~s~~~----~~l~sgs~d~~i~~~d~~~~~~~~~~~  226 (420)
T 4gga_A          153 VAWIKEGNYLAVGTSSAEVQLWDVQQQKRL--RNMTSHSARVGSLSWNS----YILSSGSRSGHIHHHDVRVAEHHVATL  226 (420)
T ss_dssp             EEECTTSSEEEEEETTSCEEEEETTTTEEE--EEECCCSSCEEEEEEET----TEEEEEETTSEEEEEETTSSSCEEEEE
T ss_pred             EEECCCCCEEEEEECCCeEEEEEcCCCcEE--EEEeCCCCceEEEeeCC----CEEEEEeCCCceeEeeecccceeeEEe
Confidence            3344444444433333  77787 578888  89999999999988855    7999999999999999886554 4555


Q ss_pred             ecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcE----EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC
Q psy7108          88 IQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQ----VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA  163 (703)
Q Consensus        88 ~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp  163 (703)
                      ..|...+.++.|+|+++.+++++.|+.+++||..+++.    +.....                    |...|.+++|+|
T Consensus       227 ~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~--------------------~~~~V~~~~~~p  286 (420)
T 4gga_A          227 SGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQ--------------------HQGAVKAVAWCP  286 (420)
T ss_dssp             ECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECC--------------------CSSCEEEEEECT
T ss_pred             cccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecc--------------------cCCceeeeeeCC
Confidence            67999999999999999999999999999999987653    223333                    345899999999


Q ss_pred             CCC-EEEE--EecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCC
Q psy7108         164 DGS-CILA--AGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKK  240 (703)
Q Consensus       164 dg~-~l~s--~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~  240 (703)
                      ++. .+++  |+.|++|++||++++++...+..+         ..+.++.|+|+++.+++++... +   ..|++||..+
T Consensus       287 ~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~---------~~v~~~~~~~~~~~lv~~sg~~-d---~~I~iwd~~~  353 (420)
T 4gga_A          287 WQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH---------SQVCSILWSPHYKELISGHGFA-Q---NQLVIWKYPT  353 (420)
T ss_dssp             TCTTEEEEEECTTTCEEEEEETTTTEEEEEEECS---------SCEEEEEEETTTTEEEEEECTT-T---CCEEEEETTT
T ss_pred             CcccEEEEEeecCCCEEEEEeCCccccceeeccc---------cceeeeeecCCCCeEEEEEecC-C---CEEEEEECCC
Confidence            654 4554  457999999999999988877643         2678899999999988766421 1   3799999999


Q ss_pred             CccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCce
Q psy7108         241 GDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYV  284 (703)
Q Consensus       241 ~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~  284 (703)
                      ++++..+.+|...|++++|+|||++|+||+.|+ |+||++.....
T Consensus       354 ~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~  398 (420)
T 4gga_A          354 MAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELDP  398 (420)
T ss_dssp             CCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSSC
T ss_pred             CcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCc
Confidence            999999999999999999999999999999999 99999876543

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=99.91  E-value=6.2e-23  Score=223.84  Aligned_cols=249  Identities=11%  Similarity=0.096  Sum_probs=202.7

Q ss_pred             ceeecc-CCCccccc-----cccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEec
Q psy7108          28 VKKGDM-AARVLKPE-----VLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKP  101 (703)
Q Consensus        28 v~~~d~-tg~~~~~~-----~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~sp  101 (703)
                      +.+||. +++.+  +     .+.+|.+.|.+++|+|  ++.++++++.|+.|++||+.+++....+..|...+.+++|+|
T Consensus       146 i~~~d~~~g~~~--~~~~~~~~~~~~~~v~~~~~~~--~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~  221 (433)
T 3bws_A          146 MDVLDINSGQTV--RLSPPEKYKKKLGFVETISIPE--HNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDP  221 (433)
T ss_dssp             EEEEETTTCCEE--EECCCHHHHTTCCEEEEEEEGG--GTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEET
T ss_pred             EEEEECCCCeEe--eecCcccccccCCceeEEEEcC--CCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcC
Confidence            677773 46665  4     5678999999999999  999999999999999999998877777777889999999999


Q ss_pred             CCCEEEEEE-CCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe--------
Q psy7108         102 DGTEIVVAT-LDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG--------  172 (703)
Q Consensus       102 dg~~las~s-~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s--------  172 (703)
                      +++.+++++ .|+.|++||+++++.+..+..+.                     .+.+++|+|+++.+++++        
T Consensus       222 ~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~---------------------~~~~~~~~~~g~~l~~~~~~~~~~~~  280 (433)
T 3bws_A          222 IRDLVYCSNWISEDISVIDRKTKLEIRKTDKIG---------------------LPRGLLLSKDGKELYIAQFSASNQES  280 (433)
T ss_dssp             TTTEEEEEETTTTEEEEEETTTTEEEEECCCCS---------------------EEEEEEECTTSSEEEEEEEESCTTCS
T ss_pred             CCCEEEEEecCCCcEEEEECCCCcEEEEecCCC---------------------CceEEEEcCCCCEEEEEECCCCcccc
Confidence            999886555 79999999999998877765533                     589999999999999887        


Q ss_pred             cCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCcc
Q psy7108         173 QSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEV  252 (703)
Q Consensus       173 ~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~  252 (703)
                      .|+.|++||+++++.+..+.         +...+.+++|+|+++.+++++..+     ..+++||+.+++....+. +..
T Consensus       281 ~dg~i~~~d~~~~~~~~~~~---------~~~~~~~~~~~~~g~~l~~~~~~~-----~~v~v~d~~~~~~~~~~~-~~~  345 (433)
T 3bws_A          281 GGGRLGIYSMDKEKLIDTIG---------PPGNKRHIVSGNTENKIYVSDMCC-----SKIEVYDLKEKKVQKSIP-VFD  345 (433)
T ss_dssp             CCEEEEEEETTTTEEEEEEE---------EEECEEEEEECSSTTEEEEEETTT-----TEEEEEETTTTEEEEEEE-CSS
T ss_pred             CCCeEEEEECCCCcEEeecc---------CCCCcceEEECCCCCEEEEEecCC-----CEEEEEECCCCcEEEEec-CCC
Confidence            48899999999988776653         123677899999998776664332     389999999887776654 667


Q ss_pred             ceEEEEEcCCCCEEEEEeC---------------CC-EEEEEcCCCceecce-----eeeEEEccchhhhHhhcC-Ccce
Q psy7108         253 RVFCVKFSPTGQAWVAATT---------------EG-VHIYSLDSGYVFDPF-----LLDISITPQSVKEALADK-DYAK  310 (703)
Q Consensus       253 ~V~~l~~spdg~~l~s~s~---------------Dg-v~iwd~~~~~~~~~~-----~~~~~~spd~~~~~l~sg-~~~~  310 (703)
                      .+.+++|+|+|+++++++.               || |++||+.+++....+     ...++|+|++  ..++.+ ..++
T Consensus       346 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg--~~l~~~~~~d~  423 (433)
T 3bws_A          346 KPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPTGLDVSPDN--RYLVISDFLDH  423 (433)
T ss_dssp             SEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSSEEEEEECTTS--CEEEEEETTTT
T ss_pred             CCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCCCCceEEEcCCC--CEEEEEECCCC
Confidence            7999999999999988776               57 999999998876544     3578999999  666554 4588


Q ss_pred             EEEEEEecC
Q psy7108         311 ALMMSLKLN  319 (703)
Q Consensus       311 ~l~la~~l~  319 (703)
                      .+.+ |+++
T Consensus       424 ~i~v-~~~~  431 (433)
T 3bws_A          424 QIRV-YRRD  431 (433)
T ss_dssp             EEEE-EEET
T ss_pred             eEEE-EEec
Confidence            8887 8775

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=99.91  E-value=4.2e-24  Score=226.18  Aligned_cols=225  Identities=11%  Similarity=0.073  Sum_probs=178.7

Q ss_pred             EEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCC---------Cc
Q psy7108          54 EFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVES---------AA  124 (703)
Q Consensus        54 ~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~---------~~  124 (703)
                      .+.+  ++..|++|+.||+|++||+.+++......  ...|.+++|+|+   +++++.|++|++|+.+.         ++
T Consensus        43 ~~~~--d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~  115 (343)
T 3lrv_A           43 SMYY--DKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNK  115 (343)
T ss_dssp             SSSE--EEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCC
T ss_pred             hhcC--CCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcc
Confidence            4455  78999999999999999999887655554  456778889988   99999999999997763         33


Q ss_pred             EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC--CCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccc
Q psy7108         125 QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA--DGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGI  202 (703)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp--dg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~  202 (703)
                      .+..+.                   ..|.+.|.+++|+|  +++++++++.|++|++||++++++......+       +
T Consensus       116 ~~~~~~-------------------~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~-------~  169 (343)
T 3lrv_A          116 VLREIE-------------------VDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAK-------S  169 (343)
T ss_dssp             EEEEEE-------------------CCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCC-------S
T ss_pred             eeEEee-------------------cCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecC-------C
Confidence            232222                   12345899999999  9999999999999999999999886655322       2


Q ss_pred             cccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccc-eeecC-CccceEEEEEcCCCCEEEEEeCCCEEEEEcC
Q psy7108         203 NDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMA-ARVLK-PEVRVFCVKFSPTGQAWVAATTEGVHIYSLD  280 (703)
Q Consensus       203 ~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~-~~~~~-h~~~V~~l~~spdg~~l~s~s~Dgv~iwd~~  280 (703)
                      ...+.+++|+|+|..+++++.++      .|++||+++++.. ..+.. |...|.+++|+|+|.+|++++.+.|++||+.
T Consensus       170 ~~~i~~~~~~pdg~~lasg~~dg------~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~  243 (343)
T 3lrv_A          170 DVEYSSGVLHKDSLLLALYSPDG------ILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTVVCFDLR  243 (343)
T ss_dssp             SCCCCEEEECTTSCEEEEECTTS------CEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESSBEEEEETT
T ss_pred             CCceEEEEECCCCCEEEEEcCCC------EEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCCeEEEEEcC
Confidence            23689999999999999888764      8999999999877 67777 9999999999999999999994449999999


Q ss_pred             CCceecce--------ee---eEEEccchhhhHhhcCCc-ceEEEEEEecCc
Q psy7108         281 SGYVFDPF--------LL---DISITPQSVKEALADKDY-AKALMMSLKLNE  320 (703)
Q Consensus       281 ~~~~~~~~--------~~---~~~~spd~~~~~l~sg~~-~~~l~la~~l~~  320 (703)
                      +++....+        ..   .++|+|++  .++++++. ++.+++ |++..
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~l~~~s~~d~~i~v-~~~~~  292 (343)
T 3lrv_A          244 KDVGTLAYPTYTIPEFKTGTVTYDIDDSG--KNMIAYSNESNSLTI-YKFDK  292 (343)
T ss_dssp             SSTTCBSSCCCBC-----CCEEEEECTTS--SEEEEEETTTTEEEE-EEECT
T ss_pred             CCCcceeecccccccccccceEEEECCCC--CEEEEecCCCCcEEE-EEEcc
Confidence            87654322        11   49999999  78888666 778887 77653

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=99.91  E-value=2.1e-23  Score=229.42  Aligned_cols=237  Identities=11%  Similarity=0.093  Sum_probs=189.7

Q ss_pred             CcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc---eeEEEe-----------------------------------
Q psy7108          47 EGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD---TQHETI-----------------------------------   88 (703)
Q Consensus        47 ~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~---~~~~~~-----------------------------------   88 (703)
                      ..++.+++|+|  +|++|+++ .++.|++||+.+++   ......                                   
T Consensus         4 ~~p~~~v~~s~--dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (450)
T 2vdu_B            4 IHPLQNLLTSR--DGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNK   80 (450)
T ss_dssp             ECCCCEEEECS--SSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC--------------------------------
T ss_pred             cccEEEEEecC--CCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCc
Confidence            35889999999  99966665 57899999998887   333222                                   


Q ss_pred             -------------------cCCCcEEEEEEecCCCEE-EEEECCCeEEEEEcC--CCcEEEEEeccccCCCCCCCCccch
Q psy7108          89 -------------------QLLSDALCVAYKPDGTEI-VVATLDGQLIMFDVE--SAAQVGSVEARRDLDSGRLDTDLVT  146 (703)
Q Consensus        89 -------------------~~~~~V~~v~~spdg~~l-as~s~dg~I~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~  146 (703)
                                         .|.+.|.+++|+|++++| ++++.||.|++||+.  +++.+..+..+.             
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~-------------  147 (450)
T 2vdu_B           81 GDSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFC-------------  147 (450)
T ss_dssp             -------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEE-------------
T ss_pred             CccccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeeccc-------------
Confidence                               123369999999999996 889899999999999  888888776432             


Q ss_pred             hhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccC---CCEEEEEcc
Q psy7108         147 REQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEF---GNVSLIETR  223 (703)
Q Consensus       147 ~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spd---g~~l~~~~~  223 (703)
                           +...|.+++|+|++++|++++.|+.|++||+.++.....    ....+.+|...|.+++|+|+   ++++++++.
T Consensus       148 -----~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~----~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~  218 (450)
T 2vdu_B          148 -----FSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKF----TQEPILGHVSMLTDVHLIKDSDGHQFIITSDR  218 (450)
T ss_dssp             -----CSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSC----CCCCSEECSSCEEEEEEEECTTSCEEEEEEET
T ss_pred             -----CCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccc----cceeeecccCceEEEEEcCCCCCCcEEEEEcC
Confidence                 133799999999999999999999999999988764320    01123345568999999999   888888776


Q ss_pred             cCCCCCeeEEECCCCCCCcccee-ecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceeccee------------
Q psy7108         224 ETHEGGNVVLKLPGVKKGDMAAR-VLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPFL------------  289 (703)
Q Consensus       224 ~~~~~~~~~i~iwd~~~~~~~~~-~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~~------------  289 (703)
                      ++      .|++||+.+++.+.. ..+|...|.+++|+ ++++|++++.|+ |++||+.+++....+.            
T Consensus       219 d~------~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~  291 (450)
T 2vdu_B          219 DE------HIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQ  291 (450)
T ss_dssp             TS------CEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTT
T ss_pred             CC------cEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhc
Confidence            53      899999999988776 55899999999999 999999999999 9999999987644332            


Q ss_pred             -------------------eeEEEccchhhhHhhcCC-cceEEEEEEec
Q psy7108         290 -------------------LDISITPQSVKEALADKD-YAKALMMSLKL  318 (703)
Q Consensus       290 -------------------~~~~~spd~~~~~l~sg~-~~~~l~la~~l  318 (703)
                                         ..+.++|++  .+++.+. .++.+.+ |++
T Consensus       292 ~~~~~~~~~~~~~~~~~~v~~i~~~~~~--~~l~~~~~~d~~i~i-w~~  337 (450)
T 2vdu_B          292 HLAPPRFQNENNDIIEFAVSKIIKSKNL--PFVAFFVEATKCIII-LEM  337 (450)
T ss_dssp             SBC----------CBCCCEEEEEECSSS--SEEEEEETTCSEEEE-EEE
T ss_pred             ccccccccccccccceEEEEEEEEeCCC--CEEEEEECCCCeEEE-EEe
Confidence                               357888888  6666665 7888888 887

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=99.91  E-value=4.4e-24  Score=233.84  Aligned_cols=257  Identities=11%  Similarity=0.121  Sum_probs=191.0

Q ss_pred             ceeecc-CCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEec---CCCcEEEEEEecCC
Q psy7108          28 VKKGDM-AARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQ---LLSDALCVAYKPDG  103 (703)
Q Consensus        28 v~~~d~-tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~---~~~~V~~v~~spdg  103 (703)
                      |++||. +++......+.+|.++|++++|+|. ++++|+|||.||+|++||++++. ......   +...+.+++|+|++
T Consensus       144 i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~-~~~~l~s~s~D~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  221 (435)
T 4e54_B          144 IMLWNFGIKDKPTFIKGIGAGGSITGLKFNPL-NTNQFYASSMEGTTRLQDFKGNI-LRVFASSDTINIWFCSLDVSASS  221 (435)
T ss_dssp             EEEECSSCCSCCEEECCCSSSCCCCEEEECSS-CTTEEEEECSSSCEEEEETTSCE-EEEEECCSSCSCCCCCEEEETTT
T ss_pred             EEEEECCCCCceeEEEccCCCCCEEEEEEeCC-CCCEEEEEeCCCEEEEeeccCCc-eeEEeccCCCCccEEEEEECCCC
Confidence            566663 3332211456799999999999984 68899999999999999997653 333333   33457889999999


Q ss_pred             CEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCC-EEEEEecCCcEEEEEC
Q psy7108         104 TEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGS-CILAAGQSKYICIYSS  182 (703)
Q Consensus       104 ~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~-~l~s~s~dg~I~lwD~  182 (703)
                      ++|++|+.||.|++||++. +.+..+.+|                    ...|.+++|+|++. ++++++.|+.|++||+
T Consensus       222 ~~l~~g~~dg~i~~wd~~~-~~~~~~~~h--------------------~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~  280 (435)
T 4e54_B          222 RMVVTGDNVGNVILLNMDG-KELWNLRMH--------------------KKKVTHVALNPCCDWFLATASVDQTVKIWDL  280 (435)
T ss_dssp             TEEEEECSSSBEEEEESSS-CBCCCSBCC--------------------SSCEEEEEECTTCSSEEEEEETTSBCCEEET
T ss_pred             CEEEEEeCCCcEeeeccCc-ceeEEEecc--------------------cceEEeeeecCCCceEEEEecCcceeeEEec
Confidence            9999999999999999864 344444444                    44899999999876 6788999999999999


Q ss_pred             CCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCcc------ceEE
Q psy7108         183 REGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEV------RVFC  256 (703)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~------~V~~  256 (703)
                      ++.+....+.     ...+|...|++++|+|+|+++++++.++      .|++||+.+++....+..|..      .+..
T Consensus       281 ~~~~~~~~~~-----~~~~h~~~v~~~~~spdg~~l~s~~~D~------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  349 (435)
T 4e54_B          281 RQVRGKASFL-----YSLPHRHPVNAACFSPDGARLLTTDQKS------EIRVYSASQWDCPLGLIPHPHRHFQHLTPIK  349 (435)
T ss_dssp             TTCCSSSCCS-----BCCBCSSCEEECCBCTTSSEEEEEESSS------CEEEEESSSSSSEEEECCCCCCCCSSSCCCB
T ss_pred             ccccccceEE-----EeeeccccccceeECCCCCeeEEEcCCC------EEEEEECCCCccceEEecccccccccceeEE
Confidence            9875433221     1234667899999999999999888764      899999999887766665532      2334


Q ss_pred             EEEcCCCCEEEEEe------------CCC-EEEEEcCCCceeccee-------eeE-EEccchhhhHhhcCCcceEEEEE
Q psy7108         257 VKFSPTGQAWVAAT------------TEG-VHIYSLDSGYVFDPFL-------LDI-SITPQSVKEALADKDYAKALMMS  315 (703)
Q Consensus       257 l~~spdg~~l~s~s------------~Dg-v~iwd~~~~~~~~~~~-------~~~-~~spd~~~~~l~sg~~~~~l~la  315 (703)
                      ..|+|++..+++++            .++ |++||..+++....+.       .++ +|+|++  .+|++++ ++.+++ 
T Consensus       350 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg--~~lasg~-d~~i~i-  425 (435)
T 4e54_B          350 AAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMG--DTLASAM-GYHILI-  425 (435)
T ss_dssp             CEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTS--SCEEEEC-SSEEEE-
T ss_pred             EEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCC--CEEEEEc-CCcEEE-
Confidence            56777777766654            234 9999999988754432       333 699999  7888876 678888 


Q ss_pred             EecCchh
Q psy7108         316 LKLNEQG  322 (703)
Q Consensus       316 ~~l~~~~  322 (703)
                      |++.+.+
T Consensus       426 W~~~~gk  432 (435)
T 4e54_B          426 WSQQEAR  432 (435)
T ss_dssp             CCCC---
T ss_pred             EECCcCe
Confidence            9987653

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.91  E-value=1.2e-23  Score=229.99  Aligned_cols=235  Identities=11%  Similarity=0.065  Sum_probs=175.1

Q ss_pred             CCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCe
Q psy7108          35 ARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQ  114 (703)
Q Consensus        35 g~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~  114 (703)
                      ++..  +.+.+|...|.+++|+|  +|       .++++.+|+.+.. ... ...|...|.+++|||||+.||+++.||.
T Consensus        42 ~~~~--~~l~gh~~~v~~V~FsP--dg-------~~~~~~~~~~~~~-~~~-~~~~~~~V~~vawSPdG~~LAs~s~dg~  108 (588)
T 2j04_A           42 PKYA--KDINCNSKNLFHVKEFP--LE-------FENKLDFELAQQN-GLL-NSQPVCYPRVCKPSPIDDWMAVLSNNGN  108 (588)
T ss_dssp             ECCC--SCCSSBGGGTEEEEEEC--CC-------CCCTTTTSCCCSS-CSS-TTSCSCCEEEEEECSSSSCEEEEETTSC
T ss_pred             cccc--ceecCCCccEEEEEECC--CC-------CcceEEEEeCCCc-eEe-ecCCCCcEEEEEECCCCCEEEEEeCCCc
Confidence            4444  55577888888888888  66       4555555543221 111 2245788999999999999999999999


Q ss_pred             EEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCce-------
Q psy7108         115 LIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGIL-------  187 (703)
Q Consensus       115 I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~-------  187 (703)
                      |++||.++  .+..+. |....               ....+.+++|||||++|++|+.||+|++||+.++..       
T Consensus       109 V~iwd~~~--~l~~l~-~~~~~---------------~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~  170 (588)
T 2j04_A          109 VSVFKDNK--MLTNLD-SKGNL---------------SSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYF  170 (588)
T ss_dssp             EEEEETTE--EEEECC-CSSCS---------------TTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEE
T ss_pred             EEEEeCCc--eeeecc-CCCcc---------------ccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCcccccccee
Confidence            99999644  555555 43200               022599999999999999999999999999998753       


Q ss_pred             EEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccc---eee-cCCccceEEEEEcCCC
Q psy7108         188 LKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMA---ARV-LKPEVRVFCVKFSPTG  263 (703)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~---~~~-~~h~~~V~~l~~spdg  263 (703)
                      +.++..+.    .+|...|.+++|+|+|  +++++.+      +.+++||+.+++..   ..+ .+|...|.+++|+  |
T Consensus       171 l~ti~~~~----~gh~~~V~sVawSPdg--Laass~D------~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g  236 (588)
T 2j04_A          171 ESSIRLSD----AGSKDWVTHIVWYEDV--LVAALSN------NSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--D  236 (588)
T ss_dssp             EEEEECSC----TTCCCCEEEEEEETTE--EEEEETT------CCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--T
T ss_pred             eeeeeccc----ccccccEEEEEEcCCc--EEEEeCC------CeEEEEECCCCccccceeeecccccCcEEEEEEE--C
Confidence            45554333    2466799999999999  5555544      48999999887743   345 4788899999999  6


Q ss_pred             CEEEEEeCCC-EEEEEcCCCce-ecc-----eeeeEEE--ccchhhhHhhcCCcceEEEEEEecC
Q psy7108         264 QAWVAATTEG-VHIYSLDSGYV-FDP-----FLLDISI--TPQSVKEALADKDYAKALMMSLKLN  319 (703)
Q Consensus       264 ~~l~s~s~Dg-v~iwd~~~~~~-~~~-----~~~~~~~--spd~~~~~l~sg~~~~~l~la~~l~  319 (703)
                      +.+|+++ ++ |++|++.+++. ...     ...++++  +|++  ..++.+..+++ ++ |..+
T Consensus       237 ~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~--~~La~a~edG~-kl-w~~d  296 (588)
T 2j04_A          237 YKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKES--TILLMSNKTSY-KV-LLED  296 (588)
T ss_dssp             TEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSC--EEEEECSSCEE-EE-EESS
T ss_pred             CEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCC--CEEEEEcCCCC-EE-Eeec
Confidence            8999998 57 99999988776 222     2467899  9999  77888888898 77 7776

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=99.91  E-value=4.5e-23  Score=218.61  Aligned_cols=241  Identities=13%  Similarity=0.094  Sum_probs=182.9

Q ss_pred             ceeeccC--CCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEE--ecCC
Q psy7108          28 VKKGDMA--ARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAY--KPDG  103 (703)
Q Consensus        28 v~~~d~t--g~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~--spdg  103 (703)
                      +++|+..  ++.+ ...+.+|.+.|++++|+|  ++++|++|+.||.|++||+.+++ ......|...|.+++|  +|++
T Consensus        66 i~iw~~~~~~~~~-~~~~~~h~~~v~~~~~~~--~~~~l~s~~~dg~v~iwd~~~~~-~~~~~~~~~~v~~~~~~~~~~~  141 (368)
T 3mmy_A           66 VRCWEVQDSGQTI-PKAQQMHTGPVLDVCWSD--DGSKVFTASCDKTAKMWDLSSNQ-AIQIAQHDAPVKTIHWIKAPNY  141 (368)
T ss_dssp             EEEEEECTTSCEE-EEEEEECSSCEEEEEECT--TSSEEEEEETTSEEEEEETTTTE-EEEEEECSSCEEEEEEEECSSC
T ss_pred             EEEEEcCCCCcee-EEEeccccCCEEEEEECc--CCCEEEEEcCCCcEEEEEcCCCC-ceeeccccCceEEEEEEeCCCC
Confidence            5566633  3332 267889999999999999  99999999999999999998875 4557789999999999  8999


Q ss_pred             CEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCC---------------------CCCccchhhcccCCccEEEEEEc
Q psy7108         104 TEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGR---------------------LDTDLVTREQSLKAKAVSTVCYS  162 (703)
Q Consensus       104 ~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~V~~i~~s  162 (703)
                      ++|++++.|+.|++||+++++.+..+..+.......                     ............+...+.++++.
T Consensus       142 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (368)
T 3mmy_A          142 SCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIF  221 (368)
T ss_dssp             EEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEE
T ss_pred             CEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEc
Confidence            999999999999999999988777776543211000                     00000011111223455666666


Q ss_pred             CCCCE----EEEEecCCcEEEEECCCC---ceEEEEEeccC----CccccccccceeeeeccCCCEEEEEcccCCCCCee
Q psy7108         163 ADGSC----ILAAGQSKYICIYSSREG---ILLKKFTITQN----KSLDGINDFINRRKMTEFGNVSLIETRETHEGGNV  231 (703)
Q Consensus       163 pdg~~----l~s~s~dg~I~lwD~~~~---~~~~~~~~~~~----~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~  231 (703)
                      ++...    +++++.|+.|++||++..   .....+..+..    ....++...|.+++|+|+++++++++.++      
T Consensus       222 ~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg------  295 (368)
T 3mmy_A          222 KDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDG------  295 (368)
T ss_dssp             ECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTS------
T ss_pred             ccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCC------
Confidence            55544    999999999999999987   45556654432    11223334799999999999999888764      


Q ss_pred             EEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEE
Q psy7108         232 VLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYS  278 (703)
Q Consensus       232 ~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd  278 (703)
                      .|++||+.+++++..+..|...|.+++|+|+|++|++++.|+ .+.|+
T Consensus       296 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~  343 (368)
T 3mmy_A          296 RFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHE  343 (368)
T ss_dssp             CEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGG
T ss_pred             eEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEeccccccccc
Confidence            799999999999999999999999999999999999999987 44443

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=99.90  E-value=1.7e-22  Score=221.08  Aligned_cols=209  Identities=14%  Similarity=0.232  Sum_probs=177.1

Q ss_pred             ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCcee---EEEecCCCcEEEEEEecCC
Q psy7108          28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQ---HETIQLLSDALCVAYKPDG  103 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~---~~~~~~~~~V~~v~~spdg  103 (703)
                      +++|| .+++++  ..+.+|.+.|.+++|++    +.+++|+.||+|++||+.++...   .....|...|.+++|  ++
T Consensus       195 i~vwd~~~~~~~--~~~~~h~~~v~~l~~~~----~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~  266 (435)
T 1p22_A          195 VRVWDVNTGEML--NTLIHHCEAVLHLRFNN----GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DD  266 (435)
T ss_dssp             EEEEESSSCCEE--EEECCCCSCEEEEECCT----TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ET
T ss_pred             EEEEECCCCcEE--EEEcCCCCcEEEEEEcC----CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CC
Confidence            66677 578888  89999999999999976    59999999999999999877654   455679999999999  68


Q ss_pred             CEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECC
Q psy7108         104 TEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSR  183 (703)
Q Consensus       104 ~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~  183 (703)
                      +.+++|+.||.|++||+++++.+..+.+|..                    .|.+++|+  ++.+++|+.|+.|++||++
T Consensus       267 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~--------------------~v~~~~~~--~~~l~~g~~dg~i~iwd~~  324 (435)
T 1p22_A          267 KYIVSASGDRTIKVWNTSTCEFVRTLNGHKR--------------------GIACLQYR--DRLVVSGSSDNTIRLWDIE  324 (435)
T ss_dssp             TEEEEEETTSEEEEEETTTCCEEEEEECCSS--------------------CEEEEEEE--TTEEEEEETTSCEEEEETT
T ss_pred             CEEEEEeCCCeEEEEECCcCcEEEEEcCCCC--------------------cEEEEEeC--CCEEEEEeCCCeEEEEECC
Confidence            8999999999999999999999999988765                    79999884  7899999999999999999


Q ss_pred             CCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCc---------cceeecCCccce
Q psy7108         184 EGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGD---------MAARVLKPEVRV  254 (703)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~---------~~~~~~~h~~~V  254 (703)
                      +++++..+..+.        ..|.++++  ++..+++++.++      .|++||+.+++         +...+.+|...|
T Consensus       325 ~~~~~~~~~~h~--------~~v~~~~~--~~~~l~sg~~dg------~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v  388 (435)
T 1p22_A          325 CGACLRVLEGHE--------ELVRCIRF--DNKRIVSGAYDG------KIKVWDLVAALDPRAPAGTLCLRTLVEHSGRV  388 (435)
T ss_dssp             TCCEEEEECCCS--------SCEEEEEC--CSSEEEEEETTS------CEEEEEHHHHTSTTSCTTTTEEEEECCCSSCC
T ss_pred             CCCEEEEEeCCc--------CcEEEEEe--cCCEEEEEeCCC------cEEEEECCCCCCccccccchheeeccCCCCCe
Confidence            999988876544        47888888  788888887764      89999988765         677788999999


Q ss_pred             EEEEEcCCCCEEEEEeCCC-EEEEEcCCCce
Q psy7108         255 FCVKFSPTGQAWVAATTEG-VHIYSLDSGYV  284 (703)
Q Consensus       255 ~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~  284 (703)
                      .+++|  +++.|++++.|| |++||+.+...
T Consensus       389 ~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~  417 (435)
T 1p22_A          389 FRLQF--DEFQIVSSSHDDTILIWDFLNDPA  417 (435)
T ss_dssp             CCEEE--CSSCEEECCSSSEEEEEC------
T ss_pred             EEEEe--CCCEEEEEeCCCEEEEEECCCCCC
Confidence            99999  788999999999 99999987654

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=99.89  E-value=6.3e-22  Score=235.71  Aligned_cols=216  Identities=13%  Similarity=0.089  Sum_probs=170.6

Q ss_pred             CCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc------------------------------------------
Q psy7108          45 GHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD------------------------------------------   82 (703)
Q Consensus        45 gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~------------------------------------------   82 (703)
                      +|...|++++|+|  ++++||+|+.||+|+||++.+++                                          
T Consensus       486 ~h~~~V~svafsp--dg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  563 (902)
T 2oaj_A          486 AKELAVDKISFAA--ETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQ  563 (902)
T ss_dssp             SSSCCEEEEEEET--TTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSE
T ss_pred             CCCCceeEEEecC--CCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCC
Confidence            8999999999999  99999999999999999997652                                          


Q ss_pred             ---eeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhc-ccCCccEEE
Q psy7108          83 ---TQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQ-SLKAKAVST  158 (703)
Q Consensus        83 ---~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~V~~  158 (703)
                         +...+..|.+.|++++|+||| +||+|+.|++|++||++++..+......               .. .+|...|++
T Consensus       564 g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~---------------~~~~gh~~~V~s  627 (902)
T 2oaj_A          564 GFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIR---------------EISGAQSACVTC  627 (902)
T ss_dssp             EEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGG---------------GTCSSCCCCEEE
T ss_pred             ccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehh---------------HhccccccceEE
Confidence               133445599999999999999 9999999999999999887765432211               11 145668999


Q ss_pred             EEEc-----CCC---CEEEEEecCCcEEEEEC---CCCceEEEEEeccCCccccccccceeee-ec--------------
Q psy7108         159 VCYS-----ADG---SCILAAGQSKYICIYSS---REGILLKKFTITQNKSLDGINDFINRRK-MT--------------  212 (703)
Q Consensus       159 i~~s-----pdg---~~l~s~s~dg~I~lwD~---~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~s--------------  212 (703)
                      ++|+     |||   ++|++|+.|++|++||+   .+|++...+.++....   +...|.+++ |+              
T Consensus       628 v~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~~~~~~~~~~~---~~~~v~~i~~~~~~~~~~~~a~~~~~  704 (902)
T 2oaj_A          628 IEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGKFDVQLMDITNVT---SKGPIHKIDAFSKETKSSCLATIPKM  704 (902)
T ss_dssp             EEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCEEEEEEEEEECC---SSCCCCEEEEEETTTCCBCBCBHHHH
T ss_pred             EEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCcEEEEecCceecC---CCCceEEEEeEecCCCCcccCCHHHH
Confidence            9999     885   89999999999999999   7888888887764211   122444444 43              


Q ss_pred             --------cCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEE---E------EcCCCCEEEEEeCCC-E
Q psy7108         213 --------EFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCV---K------FSPTGQAWVAATTEG-V  274 (703)
Q Consensus       213 --------pdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l---~------~spdg~~l~s~s~Dg-v  274 (703)
                              +++..+++ + +      ..+++|++.++++.++...|...+.++   .      |++++..|++++.|| |
T Consensus       705 ~~l~~~~~~~~~~l~~-~-~------~~ir~~~~~~~k~~~k~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~g~i  776 (902)
T 2oaj_A          705 QNLSKGLCIPGIVLIT-G-F------DDIRLITLGKSKSTHKGFKYPLAATGLSYISTVEKNNDRKNLTVIITLEINGHL  776 (902)
T ss_dssp             HGGGGTCCCCEEEEEE-C-S------SEEEEECTTCCCEEEEECSSCEEEEEEEEEEEECSSSCEEEEEEEEEEETTSEE
T ss_pred             hccCCCCCCCeEEEEE-e-c------cceEEEeCccccceeeEcccceeeeEEEEEEeccccccccCceEEEEEeCCCcE
Confidence                    34443333 3 2      279999999999888887777777776   5      788999999999999 9


Q ss_pred             EEEEcCCCceeccee
Q psy7108         275 HIYSLDSGYVFDPFL  289 (703)
Q Consensus       275 ~iwd~~~~~~~~~~~  289 (703)
                      ++|++.+.+++....
T Consensus       777 ~~~s~p~l~~~~~~~  791 (902)
T 2oaj_A          777 RVFTIPDFKEQMSEH  791 (902)
T ss_dssp             EEEETTTCCEEEEEE
T ss_pred             EEEECcchHHHhhcc
Confidence            999999999876554

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=99.89  E-value=3.2e-21  Score=200.37  Aligned_cols=220  Identities=13%  Similarity=0.096  Sum_probs=176.9

Q ss_pred             ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCce-eEEEecCCCcEEEEEEecCCCE
Q psy7108          28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDT-QHETIQLLSDALCVAYKPDGTE  105 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~-~~~~~~~~~~V~~v~~spdg~~  105 (703)
                      +++|+ .+++++  +.+.+|...+.++.+.    +..+++|+.++.+++|+...... ......|...+.+++++++++.
T Consensus        91 v~iw~~~~~~~~--~~~~~h~~~~~~~~~~----~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (318)
T 4ggc_A           91 VQLWDVQQQKRL--RNMTSHSARVGSLSWN----SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRH  164 (318)
T ss_dssp             EEEEETTTTEEE--EEEECCSSCEEEEEEE----TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSE
T ss_pred             EEEeecCCceeE--EEecCccceEEEeecC----CCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCE
Confidence            56676 578888  8999999999877664    58999999999999999887654 4555679999999999999999


Q ss_pred             EEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEE---EEEecCCcEEEEEC
Q psy7108         106 IVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCI---LAAGQSKYICIYSS  182 (703)
Q Consensus       106 las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l---~s~s~dg~I~lwD~  182 (703)
                      +++++.|+.|++||+++++......                .....+.+.|.+++++|++..+   ++++.+++|++||.
T Consensus       165 l~s~~~d~~i~iwd~~~~~~~~~~~----------------~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~  228 (318)
T 4ggc_A          165 LASGGNDNLVNVWPSAPGEGGWVPL----------------QTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNV  228 (318)
T ss_dssp             EEEEETTSCEEEEESSCBTTBSCCS----------------EEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEET
T ss_pred             EEEEecCcceeEEECCCCcccccce----------------eeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEec
Confidence            9999999999999998765321110                0111234479999999976543   35667899999999


Q ss_pred             CCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCC
Q psy7108         183 REGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPT  262 (703)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spd  262 (703)
                      +.........         +...+..+.++|++..+++++...    +..|++||+++++++..+.+|...|++++|+||
T Consensus       229 ~~~~~~~~~~---------~~~~v~~~~~~~~~~~~~~~sg~~----d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spd  295 (318)
T 4ggc_A          229 CSGACLSAVD---------AHSQVCSILWSPHYKELISGHGFA----QNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPD  295 (318)
T ss_dssp             TTCCEEEEEE---------CSSCEEEEEEETTTTEEEEEECTT----TCCEEEEETTTCCEEEEECCCSSCEEEEEECTT
T ss_pred             cccccccccc---------ceeeeeeeeecccccceEEEEEcC----CCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCC
Confidence            9887766544         223678899999999888765321    137999999999999999999999999999999


Q ss_pred             CCEEEEEeCCC-EEEEEcCCC
Q psy7108         263 GQAWVAATTEG-VHIYSLDSG  282 (703)
Q Consensus       263 g~~l~s~s~Dg-v~iwd~~~~  282 (703)
                      |++|++|+.|+ |+|||+...
T Consensus       296 g~~l~S~s~D~~v~iWd~~~~  316 (318)
T 4ggc_A          296 GATVASAAADETLRLWRCFEL  316 (318)
T ss_dssp             SSCEEEEETTTEEEEECCSCC
T ss_pred             CCEEEEEecCCeEEEEECCCC
Confidence            99999999999 999998654

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.88  E-value=1.4e-20  Score=202.28  Aligned_cols=221  Identities=14%  Similarity=0.192  Sum_probs=178.2

Q ss_pred             ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEE-EEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCE
Q psy7108          28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMV-SASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTE  105 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~-sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~  105 (703)
                      +++|| .+++++  ..+..|. .+.+++|+|  ++++|+ +++.|+.|++||+.+++.. ....+...+.+++|+|+++.
T Consensus        56 i~v~d~~~~~~~--~~~~~~~-~v~~~~~sp--dg~~l~~~~~~~~~v~v~d~~~~~~~-~~~~~~~~~~~~~~s~dg~~  129 (391)
T 1l0q_A           56 VSIIDTATNNVI--ATVPAGS-SPQGVAVSP--DGKQVYVTNMASSTLSVIDTTSNTVA-GTVKTGKSPLGLALSPDGKK  129 (391)
T ss_dssp             EEEEETTTTEEE--EEEECSS-SEEEEEECT--TSSEEEEEETTTTEEEEEETTTTEEE-EEEECSSSEEEEEECTTSSE
T ss_pred             EEEEECCCCeEE--EEEECCC-CccceEECC--CCCEEEEEECCCCEEEEEECCCCeEE-EEEeCCCCcceEEECCCCCE
Confidence            66777 477777  7776655 899999999  999775 5557799999999887544 44455668999999999998


Q ss_pred             E-EEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEE-EEEecCCcEEEEECC
Q psy7108         106 I-VVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCI-LAAGQSKYICIYSSR  183 (703)
Q Consensus       106 l-as~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l-~s~s~dg~I~lwD~~  183 (703)
                      + ++++.|+.|++||+.+++....+..+.                     .+.+++|+|+++.+ ++++.++.|++||++
T Consensus       130 l~~~~~~~~~v~~~d~~~~~~~~~~~~~~---------------------~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~  188 (391)
T 1l0q_A          130 LYVTNNGDKTVSVINTVTKAVINTVSVGR---------------------SPKGIAVTPDGTKVYVANFDSMSISVIDTV  188 (391)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEEEECCS---------------------SEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred             EEEEeCCCCEEEEEECCCCcEEEEEecCC---------------------CcceEEECCCCCEEEEEeCCCCEEEEEECC
Confidence            7 677779999999999999888877654                     57899999999988 566788999999999


Q ss_pred             CCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCC
Q psy7108         184 EGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTG  263 (703)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg  263 (703)
                      +++....+..         ...+.+++|+|+|+.+++++.+.   .+..|++||+.+++....+..+. .+.+++|+|+|
T Consensus       189 ~~~~~~~~~~---------~~~~~~~~~~~~g~~l~~~~~~~---~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg  255 (391)
T 1l0q_A          189 TNSVIDTVKV---------EAAPSGIAVNPEGTKAYVTNVDK---YFNTVSMIDTGTNKITARIPVGP-DPAGIAVTPDG  255 (391)
T ss_dssp             TTEEEEEEEC---------SSEEEEEEECTTSSEEEEEEECS---SCCEEEEEETTTTEEEEEEECCS-SEEEEEECTTS
T ss_pred             CCeEEEEEec---------CCCccceEECCCCCEEEEEecCc---CCCcEEEEECCCCeEEEEEecCC-CccEEEEccCC
Confidence            9988776652         23678899999999988877421   12489999999998877777654 57899999999


Q ss_pred             CEE-EEEeCCC-EEEEEcCCCceecce
Q psy7108         264 QAW-VAATTEG-VHIYSLDSGYVFDPF  288 (703)
Q Consensus       264 ~~l-~s~s~Dg-v~iwd~~~~~~~~~~  288 (703)
                      +++ ++++.|+ |++||+.+++....+
T Consensus       256 ~~l~~s~~~d~~v~v~d~~~~~~~~~~  282 (391)
T 1l0q_A          256 KKVYVALSFXNTVSVIDTATNTITATM  282 (391)
T ss_dssp             SEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred             CEEEEEcCCCCEEEEEECCCCcEEEEE
Confidence            988 5667788 999999998775543

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.87  E-value=2e-20  Score=203.43  Aligned_cols=231  Identities=12%  Similarity=0.178  Sum_probs=177.4

Q ss_pred             ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCC---cEEEEEcCCCceeEEEecCCCcEEEEEEecCCC
Q psy7108          28 VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDK---TVKLWNAVETDTQHETIQLLSDALCVAYKPDGT  104 (703)
Q Consensus        28 v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg---~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~  104 (703)
                      +.+||.++...  +.+.+|.+.|.+++|+|  +|+.|++++.|+   .|++||+.+++. ..+..+...+.+++|+|||+
T Consensus       161 i~i~d~~g~~~--~~l~~~~~~v~~~~~Sp--dg~~la~~s~~~~~~~i~~~d~~tg~~-~~l~~~~~~~~~~~~spdg~  235 (415)
T 2hqs_A          161 LRVSDYDGYNQ--FVVHRSPQPLMSPAWSP--DGSKLAYVTFESGRSALVIQTLANGAV-RQVASFPRHNGAPAFSPDGS  235 (415)
T ss_dssp             EEEEETTSCSC--EEEEEESSCEEEEEECT--TSSEEEEEECTTSSCEEEEEETTTCCE-EEEECCSSCEEEEEECTTSS
T ss_pred             EEEEcCCCCCC--EEEeCCCCcceeeEEcC--CCCEEEEEEecCCCcEEEEEECCCCcE-EEeecCCCcccCEEEcCCCC
Confidence            45666667777  88999999999999999  999999999885   999999988754 45667888999999999999


Q ss_pred             EEE-EEECCC--eEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec-CC--cEE
Q psy7108         105 EIV-VATLDG--QLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ-SK--YIC  178 (703)
Q Consensus       105 ~la-s~s~dg--~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~-dg--~I~  178 (703)
                      .|+ +++.|+  .|++||+++++. ..+..+.                    ..+.+++|+|||+.|++++. ++  .|+
T Consensus       236 ~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~--------------------~~~~~~~~spdg~~l~~~s~~~g~~~i~  294 (415)
T 2hqs_A          236 KLAFALSKTGSLNLYVMDLASGQI-RQVTDGR--------------------SNNTEPTWFPDSQNLAFTSDQAGRPQVY  294 (415)
T ss_dssp             EEEEEECTTSSCEEEEEETTTCCE-EECCCCS--------------------SCEEEEEECTTSSEEEEEECTTSSCEEE
T ss_pred             EEEEEEecCCCceEEEEECCCCCE-EeCcCCC--------------------CcccceEECCCCCEEEEEECCCCCcEEE
Confidence            888 555555  499999998875 3444433                    27899999999999998876 44  688


Q ss_pred             EEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEE
Q psy7108         179 IYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVK  258 (703)
Q Consensus       179 lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~  258 (703)
                      +||+.+++.. .+..        +...+.+++|+|+|+++++++.++   +...|.+||+.+++.. .+..+. .+.+++
T Consensus       295 ~~d~~~~~~~-~l~~--------~~~~~~~~~~spdG~~l~~~~~~~---g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~  360 (415)
T 2hqs_A          295 KVNINGGAPQ-RITW--------EGSQNQDADVSSDGKFMVMVSSNG---GQQHIAKQDLATGGVQ-VLSSTF-LDETPS  360 (415)
T ss_dssp             EEETTSSCCE-ECCC--------SSSEEEEEEECTTSSEEEEEEECS---SCEEEEEEETTTCCEE-ECCCSS-SCEEEE
T ss_pred             EEECCCCCEE-EEec--------CCCcccCeEECCCCCEEEEEECcC---CceEEEEEECCCCCEE-EecCCC-CcCCeE
Confidence            8899887643 2221        223678899999999998877642   2358999999988764 444454 899999


Q ss_pred             EcCCCCEEEEEeCCC----EEEEEcCCCcee-----cceeeeEEEccch
Q psy7108         259 FSPTGQAWVAATTEG----VHIYSLDSGYVF-----DPFLLDISITPQS  298 (703)
Q Consensus       259 ~spdg~~l~s~s~Dg----v~iwd~~~~~~~-----~~~~~~~~~spd~  298 (703)
                      |+|||+.|++++.++    |.+|+++++...     .....+++|+|..
T Consensus       361 ~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~~~~~~v~~~~~~~~~  409 (415)
T 2hqs_A          361 LAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSPYL  409 (415)
T ss_dssp             ECTTSSEEEEEEEETTEEEEEEEETTSCCEEECCCSSSEEEEEEECCCC
T ss_pred             EcCCCCEEEEEEcCCCccEEEEEECCCCcEEEeeCCCCCCcCCcccccc
Confidence            999999998877654    788998755432     1224667888754

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.87  E-value=1.4e-20  Score=193.70  Aligned_cols=254  Identities=13%  Similarity=0.110  Sum_probs=165.9

Q ss_pred             eEEEEEcCCCCCC---EEEEEeCCCcEEEEEcCCC---ceeEEEecCCC-------------------------cEEEEE
Q psy7108          50 VSCIEFSPVLSST---GMVSASWDKTVKLWNAVET---DTQHETIQLLS-------------------------DALCVA   98 (703)
Q Consensus        50 V~~l~~sp~~dg~---~L~sgs~Dg~V~iWd~~~~---~~~~~~~~~~~-------------------------~V~~v~   98 (703)
                      +.++-|-.  .+-   .+++++. .+|++|+..+.   +.......|+.                         .|.+++
T Consensus        42 ~~~~~~~~--~~~~~~~~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla  118 (356)
T 2w18_A           42 VSAMFWER--AGCKEPCIITACE-DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALF  118 (356)
T ss_dssp             EEEEEEC------CEEEEEEEES-SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEEC
T ss_pred             Eeeeeecc--CCCCccEEEEecc-ceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEE
Confidence            56666654  333   5677776 58999999887   33333333332                         567788


Q ss_pred             EecC----CCEEEEEECCCeEEEEEcCCCcEEEEE-eccccCCCCC--CCCccchhhcccCCccEEEEEEcC---CCCEE
Q psy7108          99 YKPD----GTEIVVATLDGQLIMFDVESAAQVGSV-EARRDLDSGR--LDTDLVTREQSLKAKAVSTVCYSA---DGSCI  168 (703)
Q Consensus        99 ~spd----g~~las~s~dg~I~vwd~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~V~~i~~sp---dg~~l  168 (703)
                      ++||    ++.+++++.  .+.+|++.+++.+.+. .+|......-  ............|...++.++|+|   ++..|
T Consensus       119 ~spd~~~~~~~l~s~g~--~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~L  196 (356)
T 2w18_A          119 CSSDDESEKQVLLKSGN--IKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEAL  196 (356)
T ss_dssp             C------CCEEEEEEEE--EEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEE
T ss_pred             ECCCccccccEEEeCCC--eEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceE
Confidence            8888    888888764  2555666555554442 2222100000  000011112223445777888888   77999


Q ss_pred             EEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccC------CCCCeeEEECCCCCCCc
Q psy7108         169 LAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRET------HEGGNVVLKLPGVKKGD  242 (703)
Q Consensus       169 ~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~------~~~~~~~i~iwd~~~~~  242 (703)
                      ++++.|++|++||++++++++++..+..     +...+.+++|+|+|+.+++.+.+.      ....+.++++||..+++
T Consensus       197 aSgS~D~TIkIWDl~TGk~l~tL~g~~~-----~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk  271 (356)
T 2w18_A          197 LGTTIMNNIVIWNLKTGQLLKKMHIDDS-----YQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTL  271 (356)
T ss_dssp             EEEETTSEEEEEETTTCCEEEEEECCC--------CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTE
T ss_pred             EEecCCCcEEEEECCCCcEEEEEcCCCc-----ceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCE
Confidence            9999999999999999999999975433     123677789999999886544210      01234799999999998


Q ss_pred             cceee-----cCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceeccee------e-eEEEccchhhhHhhcCCcc
Q psy7108         243 MAARV-----LKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPFL------L-DISITPQSVKEALADKDYA  309 (703)
Q Consensus       243 ~~~~~-----~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~~------~-~~~~spd~~~~~l~sg~~~  309 (703)
                      .+..+     .+|...+.+..++  +..+++++.|+ |+|||+.++++...+.      . .++|+||+  .+|++|+.|
T Consensus       272 ~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG--~~LaSGS~D  347 (356)
T 2w18_A          272 SVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTD--SHLLAGQKD  347 (356)
T ss_dssp             EEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSS--SEEEEECTT
T ss_pred             EEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCC--CEEEEEECC
Confidence            76544     3566555544444  78899999999 9999999998766543      2 47999999  889999999


Q ss_pred             eEEEEEEec
Q psy7108         310 KALMMSLKL  318 (703)
Q Consensus       310 ~~l~la~~l  318 (703)
                      +++++ |+.
T Consensus       348 ~TIkl-Wd~  355 (356)
T 2w18_A          348 GNIFV-YHY  355 (356)
T ss_dssp             SCEEE-EEE
T ss_pred             CcEEE-ecC
Confidence            99998 874

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.86  E-value=1.2e-20  Score=205.30  Aligned_cols=256  Identities=13%  Similarity=0.099  Sum_probs=189.2

Q ss_pred             EEecCCc--eeeccCCCccccccccCCCcCeEEEEEcCC------------CCCCEEEEEeCC------CcEEEEEcCCC
Q psy7108          22 VLKLPGV--KKGDMAARVLKPEVLSGHEGPVSCIEFSPV------------LSSTGMVSASWD------KTVKLWNAVET   81 (703)
Q Consensus        22 ~i~~~~v--~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~------------~dg~~L~sgs~D------g~V~iWd~~~~   81 (703)
                      .+++|++  .    +|+++....+.+|...+..+++++.            ..+..++.++.+      ++|++||+.. 
T Consensus        94 ~i~lwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g-  168 (415)
T 2hqs_A           94 AYQLVDTGGA----PGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDG-  168 (415)
T ss_dssp             EEEEEECSSS----TTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTS-
T ss_pred             EEEEEeCCCC----CCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCC-
Confidence            4566655  3    6665523458899988888887741            016778777664      7999999974 


Q ss_pred             ceeEEEecCCCcEEEEEEecCCCEEEEEECCC---eEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEE
Q psy7108          82 DTQHETIQLLSDALCVAYKPDGTEIVVATLDG---QLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVST  158 (703)
Q Consensus        82 ~~~~~~~~~~~~V~~v~~spdg~~las~s~dg---~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~  158 (703)
                      .....+..|...+.+++|+|||+.|++++.++   .|++||+++++... +..+..                    .+.+
T Consensus       169 ~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~-l~~~~~--------------------~~~~  227 (415)
T 2hqs_A          169 YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ-VASFPR--------------------HNGA  227 (415)
T ss_dssp             CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEE-EECCSS--------------------CEEE
T ss_pred             CCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEE-eecCCC--------------------cccC
Confidence            45677778999999999999999999999885   99999999988753 444332                    7899


Q ss_pred             EEEcCCCCEEE-EEecCCc--EEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEEC
Q psy7108         159 VCYSADGSCIL-AAGQSKY--ICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKL  235 (703)
Q Consensus       159 i~~spdg~~l~-s~s~dg~--I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~i  235 (703)
                      ++|+|||+.|+ +++.++.  |++||+++++. ..+..        +...+.+++|+|||+.+++++..+   +...|.+
T Consensus       228 ~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~--------~~~~~~~~~~spdg~~l~~~s~~~---g~~~i~~  295 (415)
T 2hqs_A          228 PAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTD--------GRSNNTEPTWFPDSQNLAFTSDQA---GRPQVYK  295 (415)
T ss_dssp             EEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCC--------CSSCEEEEEECTTSSEEEEEECTT---SSCEEEE
T ss_pred             EEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcC--------CCCcccceEECCCCCEEEEEECCC---CCcEEEE
Confidence            99999999888 5665554  99999998865 33322        334788999999999988877532   2247888


Q ss_pred             CCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCC---C-EEEEEcCCCceecc----eeeeEEEccchhhhHhhcCC
Q psy7108         236 PGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTE---G-VHIYSLDSGYVFDP----FLLDISITPQSVKEALADKD  307 (703)
Q Consensus       236 wd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~D---g-v~iwd~~~~~~~~~----~~~~~~~spd~~~~~l~sg~  307 (703)
                      ||+.+++. ..+..+...+.+++|+|||++|++++.+   . |.+|++.+++....    ....++|+|++  ..++.++
T Consensus       296 ~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~spdg--~~l~~~s  372 (415)
T 2hqs_A          296 VNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNG--TMVIYSS  372 (415)
T ss_dssp             EETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCSSSCEEEEECTTS--SEEEEEE
T ss_pred             EECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEecCCCCcCCeEEcCCC--CEEEEEE
Confidence            89988764 3455566788999999999999888764   3 89999998766321    24578999999  5555555


Q ss_pred             cce---EEEEEEecC
Q psy7108         308 YAK---ALMMSLKLN  319 (703)
Q Consensus       308 ~~~---~l~la~~l~  319 (703)
                      .++   .+.+ |++.
T Consensus       373 ~~~~~~~l~~-~d~~  386 (415)
T 2hqs_A          373 SQGMGSVLNL-VSTD  386 (415)
T ss_dssp             EETTEEEEEE-EETT
T ss_pred             cCCCccEEEE-EECC
Confidence            444   4544 6654

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.86  E-value=2.9e-22  Score=233.26  Aligned_cols=259  Identities=15%  Similarity=0.187  Sum_probs=174.1

Q ss_pred             ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCC-----CceeEEEecCCCc---------
Q psy7108          28 VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVE-----TDTQHETIQLLSD---------   93 (703)
Q Consensus        28 v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~-----~~~~~~~~~~~~~---------   93 (703)
                      +.+||..+...  ..+..|...+.+++|+|  ||+.|+++ .|+.|++|++.+     ++.......+...         
T Consensus       103 i~~~d~~~~~~--~~l~~~~~~~~~~~~Sp--dG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~  177 (706)
T 2z3z_A          103 LVGFDMLARKV--TYLFDTNEETASLDFSP--VGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQ  177 (706)
T ss_dssp             EEEEETTTTEE--EEEECCTTCCTTCEECT--TSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGG
T ss_pred             EEEEECCCCce--EEccCCcccccCCcCCC--CCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhh
Confidence            66677554444  56667788899999999  99999995 679999999987     6433222223332         


Q ss_pred             -----EEEEEEecCCCEEEEEE---------------------------------CCCeEEEEEcCCCcEEEEEeccccC
Q psy7108          94 -----ALCVAYKPDGTEIVVAT---------------------------------LDGQLIMFDVESAAQVGSVEARRDL  135 (703)
Q Consensus        94 -----V~~v~~spdg~~las~s---------------------------------~dg~I~vwd~~~~~~~~~~~~~~~~  135 (703)
                           +.+++|+|||++|++++                                 .+..|++||+.+++........   
T Consensus       178 ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~---  254 (706)
T 2z3z_A          178 REFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGE---  254 (706)
T ss_dssp             GCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCS---
T ss_pred             hhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCC---
Confidence                 47899999999999987                                 3467999999988764433211   


Q ss_pred             CCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCC-----cEEEEECCCCceEEEEEeccCCccccccccceeee
Q psy7108         136 DSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSK-----YICIYSSREGILLKKFTITQNKSLDGINDFINRRK  210 (703)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg-----~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  210 (703)
                                     .+...+.+++|+|||+.|++++.++     .|++||+.+++....+......   .....+.+++
T Consensus       255 ---------------~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~---~~~~~~~~~~  316 (706)
T 2z3z_A          255 ---------------PKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDK---HYVEPLHPLT  316 (706)
T ss_dssp             ---------------CTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECS---SCCCCCSCCE
T ss_pred             ---------------CCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCC---CeECccCCce
Confidence                           1234789999999999999987765     8999999998444433321110   1111346789


Q ss_pred             ecc--CCCEEEEEcccCCCCCeeEEECCCCC-CCccceeecCCccceEE-EEEcCCCCEEEEEeCC-C-----EEEEEcC
Q psy7108         211 MTE--FGNVSLIETRETHEGGNVVLKLPGVK-KGDMAARVLKPEVRVFC-VKFSPTGQAWVAATTE-G-----VHIYSLD  280 (703)
Q Consensus       211 ~sp--dg~~l~~~~~~~~~~~~~~i~iwd~~-~~~~~~~~~~h~~~V~~-l~~spdg~~l~s~s~D-g-----v~iwd~~  280 (703)
                      |+|  ||++++++..++      .+++|++. ++.....+..+...+.+ ++|+|||+.|+.++.+ +     |..|++.
T Consensus       317 ~sp~~dg~~l~~~~~~g------~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~  390 (706)
T 2z3z_A          317 FLPGSNNQFIWQSRRDG------WNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIK  390 (706)
T ss_dssp             ECTTCSSEEEEEECTTS------SCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETT
T ss_pred             eecCCCCEEEEEEccCC------ccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcC
Confidence            999  999777665442      45566554 45566667777777877 7999999988655543 2     5566666


Q ss_pred             CCceec----ceeeeEEEccchhhhHhhcC--Cc--ceEEEEEEecCch
Q psy7108         281 SGYVFD----PFLLDISITPQSVKEALADK--DY--AKALMMSLKLNEQ  321 (703)
Q Consensus       281 ~~~~~~----~~~~~~~~spd~~~~~l~sg--~~--~~~l~la~~l~~~  321 (703)
                      ++....    .....++|+|++  ..++..  +.  ...+.+ |++...
T Consensus       391 ~~~~~~l~~~~~~~~~~~spdg--~~l~~~~~~~~~p~~i~l-~d~~~~  436 (706)
T 2z3z_A          391 GGKTKDLTPESGMHRTQLSPDG--SAIIDIFQSPTVPRKVTV-TNIGKG  436 (706)
T ss_dssp             CCCCEESCCSSSEEEEEECTTS--SEEEEEEECSSCSCEEEE-EESSSC
T ss_pred             CCCceeccCCCceEEEEECCCC--CEEEEEecCCCCCcEEEE-EECCCC
Confidence            654321    123568999999  444322  11  134555 666544

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=99.86  E-value=4e-20  Score=196.73  Aligned_cols=252  Identities=11%  Similarity=0.102  Sum_probs=167.2

Q ss_pred             EeeecccCCceEEecCC-ceeecc-CCCccccccccCCCcCeEEEEEcCCCCCCEE-EEEeCCCcEEEEEcCCCceeEEE
Q psy7108          11 ETRETHEGGNVVLKLPG-VKKGDM-AARVLKPEVLSGHEGPVSCIEFSPVLSSTGM-VSASWDKTVKLWNAVETDTQHET   87 (703)
Q Consensus        11 ~~~~~~~~~~~~i~~~~-v~~~d~-tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L-~sgs~Dg~V~iWd~~~~~~~~~~   87 (703)
                      ...|..+|...+....+ +++|+. +++..    ...+...+..+++.+  +++.+ ++++.|++|++||..+++... .
T Consensus        24 ~v~fs~dg~~la~g~~~~~~iw~~~~~~~~----~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~v~iWd~~~~~~~~-~   96 (355)
T 3vu4_A           24 DYEFNQDQSCLILSTLKSFEIYNVHPVAHI----MSQEMRHLSKVRMLH--RTNYVAFVTGVKEVVHIWDDVKKQDVS-R   96 (355)
T ss_dssp             EEEECTTSSEEEEECSSEEEEEEETTEEEE----EEEECSCCCEEEECT--TSSEEEEECSSTTEEEEEETTTTEEEE-E
T ss_pred             EEEECCCCCEEEEEcCCEEEEEecCCccee----eeeecCCeEEEEEcC--CCCEEEEEECCccEEEEEECCCCcEEE-E
Confidence            34444444433333222 456663 33333    222333588899999  77777 567888999999998886554 4


Q ss_pred             ecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCC-cEEEEEe-----------------cccc-------CCCCCC--
Q psy7108          88 IQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESA-AQVGSVE-----------------ARRD-------LDSGRL--  140 (703)
Q Consensus        88 ~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~-~~~~~~~-----------------~~~~-------~~~~~~--  140 (703)
                      ..+...|.+++|+++.  ++++ .|+.|++||+.++ +.+..+.                 +..+       +..+..  
T Consensus        97 ~~~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~  173 (355)
T 3vu4_A           97 IKVDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSAT  173 (355)
T ss_dssp             EECSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC-----
T ss_pred             EECCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCccc
Confidence            4577899999998764  3333 3677888887766 2211111                 1100       000000  


Q ss_pred             --CCc------cc-hhhcccCCccEEEEEEcCCCCEEEEEecCCc-EEEEECCCCceEEEEEeccCCccccccccceeee
Q psy7108         141 --DTD------LV-TREQSLKAKAVSTVCYSADGSCILAAGQSKY-ICIYSSREGILLKKFTITQNKSLDGINDFINRRK  210 (703)
Q Consensus       141 --~~~------~~-~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~-I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  210 (703)
                        ...      .. ......|.+.|++++|+|+|++|++|+.|++ |++||+++++++..+...      .|...|.+++
T Consensus       174 ~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g------~h~~~v~~~~  247 (355)
T 3vu4_A          174 TQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRG------LDRADVVDMK  247 (355)
T ss_dssp             -------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECT------TCCSCEEEEE
T ss_pred             cccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcC------CCCCcEEEEE
Confidence              000      00 2234568889999999999999999999998 999999999999888621      1334899999


Q ss_pred             eccCCCEEEEEcccCCCCCeeEEECCCCCCCccce--eec---------------------CCccceEEEEEcCCCCEEE
Q psy7108         211 MTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAA--RVL---------------------KPEVRVFCVKFSPTGQAWV  267 (703)
Q Consensus       211 ~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~--~~~---------------------~h~~~V~~l~~spdg~~l~  267 (703)
                      |+|+|+++++++.++      .|++||++.+....  .+.                     ........++|+|||+.++
T Consensus       248 ~s~~~~~l~s~s~d~------~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~  321 (355)
T 3vu4_A          248 WSTDGSKLAVVSDKW------TLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVV  321 (355)
T ss_dssp             ECTTSCEEEEEETTC------EEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEE
T ss_pred             ECCCCCEEEEEECCC------EEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEE
Confidence            999999999888764      89999987653211  100                     1112236789999999999


Q ss_pred             EEeCCC-EEEEEcCCCce
Q psy7108         268 AATTEG-VHIYSLDSGYV  284 (703)
Q Consensus       268 s~s~Dg-v~iwd~~~~~~  284 (703)
                      +++.|| +++|++..+..
T Consensus       322 ~~~~dg~~~~~~~~~~~~  339 (355)
T 3vu4_A          322 VWPHTRMIETFKVVFDDE  339 (355)
T ss_dssp             EETTTTEEEEEEEEEETT
T ss_pred             EEeCCCeEEEEEEEcCCC
Confidence            999999 99999865543

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=99.85  E-value=2.5e-19  Score=195.23  Aligned_cols=218  Identities=11%  Similarity=0.074  Sum_probs=173.8

Q ss_pred             ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEE-EEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCE
Q psy7108          28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMV-SASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTE  105 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~-sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~  105 (703)
                      +++|| .+++.+  ..+..|...+.+++|+|  +++.++ +++.|+.|++||+.+++. .........+.+++|+|+|+.
T Consensus       193 v~~~d~~~~~~~--~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~g~~  267 (433)
T 3bws_A          193 VHVFDLKTLAYK--ATVDLTGKWSKILLYDP--IRDLVYCSNWISEDISVIDRKTKLE-IRKTDKIGLPRGLLLSKDGKE  267 (433)
T ss_dssp             EEEEETTTCCEE--EEEECSSSSEEEEEEET--TTTEEEEEETTTTEEEEEETTTTEE-EEECCCCSEEEEEEECTTSSE
T ss_pred             EEEEECCCceEE--EEEcCCCCCeeEEEEcC--CCCEEEEEecCCCcEEEEECCCCcE-EEEecCCCCceEEEEcCCCCE
Confidence            56677 466777  88889999999999999  888875 555899999999988754 444455667999999999999


Q ss_pred             EEEEE--------CCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEE-EEEecCCc
Q psy7108         106 IVVAT--------LDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCI-LAAGQSKY  176 (703)
Q Consensus       106 las~s--------~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l-~s~s~dg~  176 (703)
                      +++++        .|+.|++||+++++....+....                     .+.+++|+|+++.+ ++++.|+.
T Consensus       268 l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~---------------------~~~~~~~~~~g~~l~~~~~~~~~  326 (433)
T 3bws_A          268 LYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPG---------------------NKRHIVSGNTENKIYVSDMCCSK  326 (433)
T ss_dssp             EEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEE---------------------CEEEEEECSSTTEEEEEETTTTE
T ss_pred             EEEEECCCCccccCCCeEEEEECCCCcEEeeccCCC---------------------CcceEEECCCCCEEEEEecCCCE
Confidence            99988        48899999999998776653322                     67899999999765 55688999


Q ss_pred             EEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCC---------CCeeEEECCCCCCCccceee
Q psy7108         177 ICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHE---------GGNVVLKLPGVKKGDMAARV  247 (703)
Q Consensus       177 I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~---------~~~~~i~iwd~~~~~~~~~~  247 (703)
                      |++||+++++.+..+..         ...+.+++|+|+|+.+++++.....         ..+..|++||..+++....+
T Consensus       327 v~v~d~~~~~~~~~~~~---------~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~  397 (433)
T 3bws_A          327 IEVYDLKEKKVQKSIPV---------FDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFW  397 (433)
T ss_dssp             EEEEETTTTEEEEEEEC---------SSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEE
T ss_pred             EEEEECCCCcEEEEecC---------CCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEe
Confidence            99999999988777652         2367899999999988887754210         01248999999999887776


Q ss_pred             cCCccceEEEEEcCCCCEEEEEeC-CC-EEEEEcCC
Q psy7108         248 LKPEVRVFCVKFSPTGQAWVAATT-EG-VHIYSLDS  281 (703)
Q Consensus       248 ~~h~~~V~~l~~spdg~~l~s~s~-Dg-v~iwd~~~  281 (703)
                      .. ...+.+++|+|+|++|++++. |+ |++|+++.
T Consensus       398 ~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~  432 (433)
T 3bws_A          398 EA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG  432 (433)
T ss_dssp             EC-SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred             cC-CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence            65 457899999999999988775 88 99999863

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.84  E-value=1.9e-21  Score=226.87  Aligned_cols=248  Identities=9%  Similarity=0.095  Sum_probs=163.5

Q ss_pred             ceeeccC-CCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcE------------
Q psy7108          28 VKKGDMA-ARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDA------------   94 (703)
Q Consensus        28 v~~~d~t-g~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V------------   94 (703)
                      +.+||.. +++.......+|...+.+++|||  ||+.|++++. +.|++||+.+++.......+...+            
T Consensus        93 i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SP--dG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~e  169 (723)
T 1xfd_A           93 YVLSKIPHGDPQSLDPPEVSNAKLQYAGWGP--KGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEE  169 (723)
T ss_dssp             EEEEESSSCCCEECCCTTCCSCCCSBCCBCS--STTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHH
T ss_pred             EEEEECCCCceEeccCCccccccccccEECC--CCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEE
Confidence            3467643 44320133345666799999999  9999999986 799999998875544333333333            


Q ss_pred             ------EEEEEecCCCEEEEEECCC----------------------------------eEEEEEcCCCcEEEEEecccc
Q psy7108          95 ------LCVAYKPDGTEIVVATLDG----------------------------------QLIMFDVESAAQVGSVEARRD  134 (703)
Q Consensus        95 ------~~v~~spdg~~las~s~dg----------------------------------~I~vwd~~~~~~~~~~~~~~~  134 (703)
                            .+++|||||+.|++++.|+                                  .|++||+.+++....+..+..
T Consensus       170 e~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~  249 (723)
T 1xfd_A          170 EILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDD  249 (723)
T ss_dssp             TTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCC
T ss_pred             EeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCcc
Confidence                  7899999999999987653                                  688888887765444443211


Q ss_pred             CCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec----CCcEEEEECCCCceEEEEEeccCCccccccccc----
Q psy7108         135 LDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ----SKYICIYSSREGILLKKFTITQNKSLDGINDFI----  206 (703)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~----dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v----  206 (703)
                                    ...+...+..++|+|||+.+++.+.    +..|++||+.++++...+..+..       ..+    
T Consensus       250 --------------~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~-------~~~~~~~  308 (723)
T 1xfd_A          250 --------------PRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESE-------AWLHRQN  308 (723)
T ss_dssp             --------------GGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECS-------SCCCCCC
T ss_pred             --------------CCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccC-------CEEeccC
Confidence                          0112347899999999998877643    35799999999987766543322       122    


Q ss_pred             eeeeeccCCCEEEEE-cccC-CCCCeeEEECCC-CCCCc--cceeecCCccceEE-EEEcCCCCEEEEEeCC---C-EEE
Q psy7108         207 NRRKMTEFGNVSLIE-TRET-HEGGNVVLKLPG-VKKGD--MAARVLKPEVRVFC-VKFSPTGQAWVAATTE---G-VHI  276 (703)
Q Consensus       207 ~~~~~spdg~~l~~~-~~~~-~~~~~~~i~iwd-~~~~~--~~~~~~~h~~~V~~-l~~spdg~~l~s~s~D---g-v~i  276 (703)
                      ..++|+|||+.+++. +..+ .......+.+|| ..+++  +...+..+...+.. ++|+|||+.|+..+.+   + +++
T Consensus       309 ~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l  388 (723)
T 1xfd_A          309 EEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQL  388 (723)
T ss_dssp             CCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEE
T ss_pred             CCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEE
Confidence            378999999988775 3221 111135788888 45544  14444444445554 6999999999765554   6 889


Q ss_pred             EEcCCCc--e---ec------ceeeeEEEccchh
Q psy7108         277 YSLDSGY--V---FD------PFLLDISITPQSV  299 (703)
Q Consensus       277 wd~~~~~--~---~~------~~~~~~~~spd~~  299 (703)
                      |+++...  .   +.      .....++|+|++.
T Consensus       389 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~  422 (723)
T 1xfd_A          389 YSANTVGNFNRQCLSCDLVENCTYFSASFSHSMD  422 (723)
T ss_dssp             EEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSS
T ss_pred             EEEeCCCCCCcceecccccCCCCeEEEEECCCCC
Confidence            9986421  1   11      1135689999983

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.83  E-value=2.7e-22  Score=228.14  Aligned_cols=232  Identities=9%  Similarity=0.076  Sum_probs=162.0

Q ss_pred             ceeeccCCCccccccccCCC-cCeEEEEEcCCCCCCEEEEEeC---CCcEEEEEcCC--CceeEEEecCCCcEEEEEEec
Q psy7108          28 VKKGDMAARVLKPEVLSGHE-GPVSCIEFSPVLSSTGMVSASW---DKTVKLWNAVE--TDTQHETIQLLSDALCVAYKP  101 (703)
Q Consensus        28 v~~~d~tg~~~~~~~l~gH~-~~V~~l~~sp~~dg~~L~sgs~---Dg~V~iWd~~~--~~~~~~~~~~~~~V~~v~~sp  101 (703)
                      +++|+.++...  +.+..|. ..+.+++|+|  | +.+++++.   +...++|.+..  ...... ......+...+|+|
T Consensus        46 ~~lw~~~~g~~--~~lt~~~~~~~~~~~~sp--d-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~~-l~~~~~~~~~~~s~  119 (582)
T 3o4h_A           46 VNAYLYDGGET--VKLNREPINSVLDPHYGV--G-RVILVRDVSKGAEQHALFKVNTSRPGEEQR-LEAVKPMRILSGVD  119 (582)
T ss_dssp             EEEEEEETTEE--EECCSSCCSEECEECTTC--S-EEEEEEECSTTSCCEEEEEEETTSTTCCEE-CTTSCSBEEEEEEE
T ss_pred             eeEEEEcCCCc--EeeecccccccccccCCC--C-eEEEEeccCCCCcceEEEEEeccCCCcccc-ccCCCCceeeeeCC
Confidence            45565455544  5666665 6899999999  8 77777765   45567766543  322233 33333455779999


Q ss_pred             CCCE-EEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC----Cc
Q psy7108         102 DGTE-IVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS----KY  176 (703)
Q Consensus       102 dg~~-las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d----g~  176 (703)
                      ||+. +++++.++.+.+||+.+++.......+                      . .+++|+|||+.|++++.+    +.
T Consensus       120 dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~----------------------~-~~~~~spDG~~la~~~~~~~~~~~  176 (582)
T 3o4h_A          120 TGEAVVFTGATEDRVALYALDGGGLRELARLP----------------------G-FGFVSDIRGDLIAGLGFFGGGRVS  176 (582)
T ss_dssp             CSSCEEEEEECSSCEEEEEEETTEEEEEEEES----------------------S-CEEEEEEETTEEEEEEEEETTEEE
T ss_pred             CCCeEEEEecCCCCceEEEccCCcEEEeecCC----------------------C-ceEEECCCCCEEEEEEEcCCCCeE
Confidence            9863 334444555669999988765544331                      2 678999999999988776    77


Q ss_pred             EEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEE
Q psy7108         177 ICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFC  256 (703)
Q Consensus       177 I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~  256 (703)
                      |++||+.+++.. .+..+        ...+..++|||||+.++.+..+    +...|++||+.+++.. .+..|...+.+
T Consensus       177 i~~~d~~~g~~~-~l~~~--------~~~~~~~~~SpDG~~l~~~~~~----~~~~i~~~d~~~~~~~-~~~~~~~~~~~  242 (582)
T 3o4h_A          177 LFTSNLSSGGLR-VFDSG--------EGSFSSASISPGMKVTAGLETA----REARLVTVDPRDGSVE-DLELPSKDFSS  242 (582)
T ss_dssp             EEEEETTTCCCE-EECCS--------SCEEEEEEECTTSCEEEEEECS----SCEEEEEECTTTCCEE-ECCCSCSHHHH
T ss_pred             EEEEcCCCCCce-EeecC--------CCccccceECCCCCEEEEccCC----CeeEEEEEcCCCCcEE-EccCCCcChhh
Confidence            999999988764 33322        3367899999999998843332    2358999999998877 67777777777


Q ss_pred             EE--------EcCCCCEEEEEeCCC-EEEEEcCCCceecc---eeeeEEEccchhhhHhhcCC
Q psy7108         257 VK--------FSPTGQAWVAATTEG-VHIYSLDSGYVFDP---FLLDISITPQSVKEALADKD  307 (703)
Q Consensus       257 l~--------~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~---~~~~~~~spd~~~~~l~sg~  307 (703)
                      ++        |+|||..+++++.++ +++|++  ++....   ...+++|+ ++  ..+.+.+
T Consensus       243 ~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~~~~~~v~~~~~s-dg--~~l~~~s  300 (582)
T 3o4h_A          243 YRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVEAPQGNHGRVVLW-RG--KLVTSHT  300 (582)
T ss_dssp             HCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEECCCSSEEEEEEEE-TT--EEEEEEE
T ss_pred             hhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeeccCCCceEEEEec-CC--EEEEEEc
Confidence            77        999998889999999 999999  655432   23467788 77  4444433

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.83  E-value=1e-18  Score=183.04  Aligned_cols=255  Identities=11%  Similarity=0.030  Sum_probs=180.8

Q ss_pred             ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeC-CCcEEEEEcCCCce-eEEEecCCCcEEEEEEecCCC
Q psy7108          28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASW-DKTVKLWNAVETDT-QHETIQLLSDALCVAYKPDGT  104 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~-Dg~V~iWd~~~~~~-~~~~~~~~~~V~~v~~spdg~  104 (703)
                      +.+|| .+++++  ..+..+...+ +++|+|  +++++++++. ++.|.+||+.+++. ......+.....+++|+|+|+
T Consensus        22 v~~~d~~~~~~~--~~~~~~~~~~-~~~~s~--dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~   96 (331)
T 3u4y_A           22 ISFFSTDTLEIL--NQITLGYDFV-DTAITS--DCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQ   96 (331)
T ss_dssp             EEEEETTTCCEE--EEEECCCCEE-EEEECS--SSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSS
T ss_pred             EEEEeCccccee--eeEEccCCcc-eEEEcC--CCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCC
Confidence            33444 367777  6666666677 999999  9997766655 88999999988866 444444555555599999999


Q ss_pred             EEEEEECCC---eEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEE-ecCCc-EEE
Q psy7108         105 EIVVATLDG---QLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAA-GQSKY-ICI  179 (703)
Q Consensus       105 ~las~s~dg---~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~-s~dg~-I~l  179 (703)
                      +++++..++   .|.+||+.+++.+..+....                     ...+++|+|||++++++ ..++. |.+
T Consensus        97 ~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~---------------------~~~~~~~spdg~~l~~~~~~~~~~i~~  155 (331)
T 3u4y_A           97 FAVTVTGLNHPFNMQSYSFLKNKFISTIPIPY---------------------DAVGIAISPNGNGLILIDRSSANTVRR  155 (331)
T ss_dssp             EEEECCCSSSSCEEEEEETTTTEEEEEEECCT---------------------TEEEEEECTTSSCEEEEEETTTTEEEE
T ss_pred             EEEEecCCCCcccEEEEECCCCCeEEEEECCC---------------------CccceEECCCCCEEEEEecCCCceEEE
Confidence            999555443   89999999999887776543                     46899999999866655 45578 999


Q ss_pred             EECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcc---ceeecCCccceEE
Q psy7108         180 YSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDM---AARVLKPEVRVFC  256 (703)
Q Consensus       180 wD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~---~~~~~~h~~~V~~  256 (703)
                      |++.....+...... .  . ........++|+|+|+.+++++..+     ..|.+||+.+++.   +..+.. ...+.+
T Consensus       156 ~~~~~~g~~~~~~~~-~--~-~~~~~~~~~~~spdg~~l~v~~~~~-----~~v~v~d~~~~~~~~~~~~~~~-~~~~~~  225 (331)
T 3u4y_A          156 FKIDADGVLFDTGQE-F--I-SGGTRPFNITFTPDGNFAFVANLIG-----NSIGILETQNPENITLLNAVGT-NNLPGT  225 (331)
T ss_dssp             EEECTTCCEEEEEEE-E--E-CSSSSEEEEEECTTSSEEEEEETTT-----TEEEEEECSSTTSCEEEEEEEC-SSCCCC
T ss_pred             EEECCCCcEeecCCc-c--c-cCCCCccceEECCCCCEEEEEeCCC-----CeEEEEECCCCcccceeeeccC-CCCCce
Confidence            999864433222100 0  0 1122467899999999777766432     3799999998887   555553 356788


Q ss_pred             EEEcCCCCEEEEEeC-CC-EEEEEcCCCce--eccee-------------eeEEEccchhhhHh-hcCCcceEEEEEEec
Q psy7108         257 VKFSPTGQAWVAATT-EG-VHIYSLDSGYV--FDPFL-------------LDISITPQSVKEAL-ADKDYAKALMMSLKL  318 (703)
Q Consensus       257 l~~spdg~~l~s~s~-Dg-v~iwd~~~~~~--~~~~~-------------~~~~~spd~~~~~l-~sg~~~~~l~la~~l  318 (703)
                      ++|+|||+++++++. ++ |.+||..+++.  ...+.             ..++|+|++  ..+ .++..++.+.+ |++
T Consensus       226 ~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg--~~l~v~~~~~~~v~v-~d~  302 (331)
T 3u4y_A          226 IVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTE--TKLFISANISRELKV-FTI  302 (331)
T ss_dssp             EEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTS--SEEEEEETTTTEEEE-EET
T ss_pred             EEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCC--CEEEEecCCCCcEEE-EEe
Confidence            999999998866654 44 99999998876  22211             226999999  444 34455667777 887


Q ss_pred             Cch
Q psy7108         319 NEQ  321 (703)
Q Consensus       319 ~~~  321 (703)
                      ..+
T Consensus       303 ~~~  305 (331)
T 3u4y_A          303 SGK  305 (331)
T ss_dssp             TSC
T ss_pred             cCC
Confidence            754

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.81  E-value=5.9e-19  Score=180.39  Aligned_cols=235  Identities=13%  Similarity=0.157  Sum_probs=166.1

Q ss_pred             CCceEEecCCceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCC-CceeEEEecC-CCcEE
Q psy7108          18 GGNVVLKLPGVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVE-TDTQHETIQL-LSDAL   95 (703)
Q Consensus        18 ~~~~~i~~~~v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~-~~~~~~~~~~-~~~V~   95 (703)
                      +.+..+.+|++.    +++ .  ..+..|...|.+++|+|  ++++|++++ ++.|++||+.+ ++.......+ ...+.
T Consensus        19 ~~~~~i~~~d~~----~~~-~--~~~~~~~~~v~~~~~sp--dg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~   88 (297)
T 2ojh_A           19 SMRSSIEIFNIR----TRK-M--RVVWQTPELFEAPNWSP--DGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNN   88 (297)
T ss_dssp             CCCEEEEEEETT----TTE-E--EEEEEESSCCEEEEECT--TSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCS
T ss_pred             CcceeEEEEeCC----CCc-e--eeeccCCcceEeeEECC--CCCEEEEEc-CCeEEEEeCCCCCCceEecccccccccc
Confidence            444555555443    343 4  56677999999999999  999999987 78999999988 6543333333 36788


Q ss_pred             EEEEecCCCEEEEEEC--CC--eEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEE-E
Q psy7108          96 CVAYKPDGTEIVVATL--DG--QLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCIL-A  170 (703)
Q Consensus        96 ~v~~spdg~~las~s~--dg--~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~-s  170 (703)
                      +++|+|+|+.|++++.  ++  .|..|+..+++. ..+..+                     ..+..++|+||++.|+ +
T Consensus        89 ~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~---------------------~~~~~~~~spdg~~l~~~  146 (297)
T 2ojh_A           89 DHGISPDGALYAISDKVEFGKSAIYLLPSTGGTP-RLMTKN---------------------LPSYWHGWSPDGKSFTYC  146 (297)
T ss_dssp             CCEECTTSSEEEEEECTTTSSCEEEEEETTCCCC-EECCSS---------------------SSEEEEEECTTSSEEEEE
T ss_pred             ceEECCCCCEEEEEEeCCCCcceEEEEECCCCce-EEeecC---------------------CCccceEECCCCCEEEEE
Confidence            9999999999999983  34  455555555542 222222                     1478899999999887 6


Q ss_pred             EecCCcEEEEECC--CCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC-CCccceee
Q psy7108         171 AGQSKYICIYSSR--EGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK-KGDMAARV  247 (703)
Q Consensus       171 ~s~dg~I~lwD~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~-~~~~~~~~  247 (703)
                      ++.++.+++|++.  ++.. ..+.        .+...+.+++|+|+|+.+++++..+     ..+++|++. .+.....+
T Consensus       147 ~~~~~~~~l~~~~~~~~~~-~~~~--------~~~~~~~~~~~s~dg~~l~~~~~~~-----~~~~i~~~~~~~~~~~~~  212 (297)
T 2ojh_A          147 GIRDQVFDIYSMDIDSGVE-TRLT--------HGEGRNDGPDYSPDGRWIYFNSSRT-----GQMQIWRVRVDGSSVERI  212 (297)
T ss_dssp             EEETTEEEEEEEETTTCCE-EECC--------CSSSCEEEEEECTTSSEEEEEECTT-----SSCEEEEEETTSSCEEEC
T ss_pred             ECCCCceEEEEEECCCCcc-eEcc--------cCCCccccceECCCCCEEEEEecCC-----CCccEEEECCCCCCcEEE
Confidence            7788989999864  3333 2222        2234788999999999888766422     246677665 44556667


Q ss_pred             cCCccceEEEEEcCCCCEEEEEeCC-----------C-EEEEEcCCCceecce--------eeeEEEccch
Q psy7108         248 LKPEVRVFCVKFSPTGQAWVAATTE-----------G-VHIYSLDSGYVFDPF--------LLDISITPQS  298 (703)
Q Consensus       248 ~~h~~~V~~l~~spdg~~l~s~s~D-----------g-v~iwd~~~~~~~~~~--------~~~~~~spd~  298 (703)
                      ..+...+.+++|+|+|++|++++.+           + |.+|++.+++.....        ...++|+|++
T Consensus       213 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg  283 (297)
T 2ojh_A          213 TDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDG  283 (297)
T ss_dssp             CCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTS
T ss_pred             ecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCC
Confidence            7788889999999999999888765           4 899999887652221        2457788887

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.80  E-value=1e-17  Score=188.13  Aligned_cols=263  Identities=14%  Similarity=0.150  Sum_probs=189.3

Q ss_pred             ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEc--CCCceeEEEecCCCcEEEEEEec---
Q psy7108          28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNA--VETDTQHETIQLLSDALCVAYKP---  101 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~--~~~~~~~~~~~~~~~V~~v~~sp---  101 (703)
                      +.+|| .+++++  .++..+.. +.+++|+|  +|++|++++.|++|++||+  .+++.... ..+...+..++|+|   
T Consensus       161 V~v~D~~t~~~~--~~i~~g~~-~~~v~~sp--dg~~l~v~~~d~~V~v~D~~~~t~~~~~~-i~~g~~p~~va~sp~~~  234 (543)
T 1nir_A          161 IALVDGDSKKIV--KVIDTGYA-VHISRMSA--SGRYLLVIGRDARIDMIDLWAKEPTKVAE-IKIGIEARSVESSKFKG  234 (543)
T ss_dssp             EEEEETTTCCEE--EEEECSTT-EEEEEECT--TSCEEEEEETTSEEEEEETTSSSCEEEEE-EECCSEEEEEEECCSTT
T ss_pred             EEEEECCCceEE--EEEecCcc-cceEEECC--CCCEEEEECCCCeEEEEECcCCCCcEEEE-EecCCCcceEEeCCCcC
Confidence            44455 478888  88873333 89999999  9999999999999999999  67654444 44667789999999   


Q ss_pred             -CCCEEEEEEC-CCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccC-CccEEEEEEcCCCCEE-EEEecCCcE
Q psy7108         102 -DGTEIVVATL-DGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLK-AKAVSTVCYSADGSCI-LAAGQSKYI  177 (703)
Q Consensus       102 -dg~~las~s~-dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~V~~i~~spdg~~l-~s~s~dg~I  177 (703)
                       ||+++++++. +++|.+||..+++.+..+..+.....          ....| ...+..+.++|++..+ ++...++.|
T Consensus       235 ~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~----------~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i  304 (543)
T 1nir_A          235 YEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVD----------TQTYHPEPRVAAIIASHEHPEFIVNVKETGKV  304 (543)
T ss_dssp             CTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSS----------SCCEESCCCEEEEEECSSSSEEEEEETTTTEE
T ss_pred             CCCCEEEEEEccCCeEEEEeccccccceeecccCcccC----------ccccccCCceEEEEECCCCCEEEEEECCCCeE
Confidence             9999999885 89999999999999988875321000          00001 1268899999987655 456678999


Q ss_pred             EEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC----Cccc
Q psy7108         178 CIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK----PEVR  253 (703)
Q Consensus       178 ~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~----h~~~  253 (703)
                      .+||+.+.+.+.......       ...+..+.|+|+|+++++++..+     ..|.+||..++++...+..    |.+.
T Consensus       305 ~vvd~~~~~~l~~~~i~~-------~~~~~~~~~spdg~~l~va~~~~-----~~v~v~D~~tg~l~~~i~~g~~ph~g~  372 (543)
T 1nir_A          305 LLVNYKDIDNLTVTSIGA-------APFLHDGGWDSSHRYFMTAANNS-----NKVAVIDSKDRRLSALVDVGKTPHPGR  372 (543)
T ss_dssp             EEEECTTSSSCEEEEEEC-------CSSCCCEEECTTSCEEEEEEGGG-----TEEEEEETTTTEEEEEEECSSSBCCTT
T ss_pred             EEEEecCCCcceeEEecc-------CcCccCceECCCCCEEEEEecCC-----CeEEEEECCCCeEEEeeccCCCCCCCC
Confidence            999998876544222111       23567899999999887766432     3799999999988777664    5444


Q ss_pred             eEEEEEcCC-CCEEEEEe-CCC-EEEEEcCC-------Cceeccee------eeEEEccchhhhHhhcCC-------cce
Q psy7108         254 VFCVKFSPT-GQAWVAAT-TEG-VHIYSLDS-------GYVFDPFL------LDISITPQSVKEALADKD-------YAK  310 (703)
Q Consensus       254 V~~l~~spd-g~~l~s~s-~Dg-v~iwd~~~-------~~~~~~~~------~~~~~spd~~~~~l~sg~-------~~~  310 (703)
                      ...+ ++|+ |..+++++ .|+ |.+|++++       .++++.+.      ..+.++|++  ..|....       .+.
T Consensus       373 g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg--~~l~v~~~~~~~~~~~~  449 (543)
T 1nir_A          373 GANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKS--SHLYVDTTFNPDARISQ  449 (543)
T ss_dssp             CEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTC--CEEEECCTTCSSHHHHT
T ss_pred             Cccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCC--CcEEEecCCCCCcccCc
Confidence            4333 4787 55567765 467 99999988       66655543      458999999  5555544       366


Q ss_pred             EEEEEEecCchh
Q psy7108         311 ALMMSLKLNEQG  322 (703)
Q Consensus       311 ~l~la~~l~~~~  322 (703)
                      ++.+ |++++.+
T Consensus       450 ~v~v-~d~~~~~  460 (543)
T 1nir_A          450 SVAV-FDLKNLD  460 (543)
T ss_dssp             CEEE-EETTCTT
T ss_pred             eEEE-EECCCCC
Confidence            7877 8877653

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.79  E-value=9.6e-18  Score=175.86  Aligned_cols=268  Identities=11%  Similarity=0.115  Sum_probs=176.0

Q ss_pred             eeecccCCceEEecCCceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCC-CcEEEEEcC--CCce-eEEE
Q psy7108          12 TRETHEGGNVVLKLPGVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWD-KTVKLWNAV--ETDT-QHET   87 (703)
Q Consensus        12 ~~~~~~~~~~~i~~~~v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~D-g~V~iWd~~--~~~~-~~~~   87 (703)
                      .++..++.+..+.+|++..   +++.. ......|...+.+++|+|  ++++|++++.+ +.|++|++.  ++.. ....
T Consensus         6 ~l~~~~~~~~~v~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~sp--dg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~   79 (343)
T 1ri6_A            6 TVYIASPESQQIHVWNLNH---EGALT-LTQVVDVPGQVQPMVVSP--DKRYLYVGVRPEFRVLAYRIAPDDGALTFAAE   79 (343)
T ss_dssp             EEEEEEGGGTEEEEEEECT---TSCEE-EEEEEECSSCCCCEEECT--TSSEEEEEETTTTEEEEEEECTTTCCEEEEEE
T ss_pred             EEEEeCCCCCeEEEEEECC---CCcEE-EeeeEecCCCCceEEECC--CCCEEEEeecCCCeEEEEEecCCCCceeeccc
Confidence            3444444555666665531   34322 012235778899999999  99999888876 899999997  4432 2222


Q ss_pred             ecCCCcEEEEEEecCCCEEEEEEC-CCeEEEEEcCCC---cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC
Q psy7108          88 IQLLSDALCVAYKPDGTEIVVATL-DGQLIMFDVESA---AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA  163 (703)
Q Consensus        88 ~~~~~~V~~v~~spdg~~las~s~-dg~I~vwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp  163 (703)
                      ......+.+++|+|+|+.+++++. ++.|.+||++++   +....+..+.                     .+.+++|+|
T Consensus        80 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~---------------------~~~~~~~s~  138 (343)
T 1ri6_A           80 SALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLD---------------------GCHSANISP  138 (343)
T ss_dssp             EECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCT---------------------TBCCCEECT
T ss_pred             cccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCC---------------------CceEEEECC
Confidence            333447899999999998877765 889999999533   3333333322                     477899999


Q ss_pred             CCCEEEEEe-cCCcEEEEECCC-CceEEEE--EeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC
Q psy7108         164 DGSCILAAG-QSKYICIYSSRE-GILLKKF--TITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK  239 (703)
Q Consensus       164 dg~~l~s~s-~dg~I~lwD~~~-~~~~~~~--~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~  239 (703)
                      +|+.+++++ .++.|.+||+.+ ++.....  .....     ....+..++|+|+|+.+++++..+     ..+.+||+.
T Consensus       139 dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~pdg~~l~~~~~~~-----~~i~~~~~~  208 (343)
T 1ri6_A          139 DNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTV-----EGAGPRHMVFHPNEQYAYCVNELN-----SSVDVWELK  208 (343)
T ss_dssp             TSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECS-----TTCCEEEEEECTTSSEEEEEETTT-----TEEEEEESS
T ss_pred             CCCEEEEecCCCCEEEEEEecCCCceeeecccccccC-----CCCCcceEEECCCCCEEEEEeCCC-----CEEEEEEec
Confidence            999888877 889999999987 6543322  11111     113567899999999877665322     379999985


Q ss_pred             C--Ccc--ceeec----C--CccceEEEEEcCCCCEEEEE-eCCC-EEEEEcC--CCc--eecce-----eeeEEEccch
Q psy7108         240 K--GDM--AARVL----K--PEVRVFCVKFSPTGQAWVAA-TTEG-VHIYSLD--SGY--VFDPF-----LLDISITPQS  298 (703)
Q Consensus       240 ~--~~~--~~~~~----~--h~~~V~~l~~spdg~~l~s~-s~Dg-v~iwd~~--~~~--~~~~~-----~~~~~~spd~  298 (703)
                      .  ++.  .....    +  ....+.+++|+|+|++|+++ ..++ +.+|++.  ++.  ....+     ...++|+|++
T Consensus       209 ~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg  288 (343)
T 1ri6_A          209 DPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSG  288 (343)
T ss_dssp             CTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTS
T ss_pred             CCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCC
Confidence            3  432  11221    1  12356789999999988644 4677 9999998  332  22111     3568999999


Q ss_pred             hhhHhhc-CCcceEEEEEEecC
Q psy7108         299 VKEALAD-KDYAKALMMSLKLN  319 (703)
Q Consensus       299 ~~~~l~s-g~~~~~l~la~~l~  319 (703)
                        ..+.. +..++.+.+ |+++
T Consensus       289 --~~l~~~~~~~~~v~v-~~~d  307 (343)
T 1ri6_A          289 --KYLIAAGQKSHHISV-YEIV  307 (343)
T ss_dssp             --SEEEEECTTTCEEEE-EEEE
T ss_pred             --CEEEEecCCCCeEEE-EEEc
Confidence              54443 435677776 7554

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.78  E-value=8.5e-17  Score=169.59  Aligned_cols=235  Identities=10%  Similarity=0.164  Sum_probs=177.8

Q ss_pred             ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEE-EEeCCCcEEEEEcCCCceeEEEecCCC---------cEEE
Q psy7108          28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMV-SASWDKTVKLWNAVETDTQHETIQLLS---------DALC   96 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~-sgs~Dg~V~iWd~~~~~~~~~~~~~~~---------~V~~   96 (703)
                      +..|| .+++.+  ..+.. ...+.+++|+|  +++.++ ++..++.|.+||..+++....+..+..         .+.+
T Consensus        71 v~~~d~~~~~~~--~~~~~-~~~~~~~~~s~--dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (353)
T 3vgz_A           71 VYRLDPVTLEVT--QAIHN-DLKPFGATINN--TTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRE  145 (353)
T ss_dssp             EEEECTTTCCEE--EEEEE-SSCCCSEEEET--TTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEE
T ss_pred             EEEEcCCCCeEE--EEEec-CCCcceEEECC--CCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCce
Confidence            55566 366666  55553 34578899999  998554 556679999999988876555544322         2788


Q ss_pred             EEEecCCCEEEEEE--CCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC
Q psy7108          97 VAYKPDGTEIVVAT--LDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS  174 (703)
Q Consensus        97 v~~spdg~~las~s--~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d  174 (703)
                      ++|+|+|+.+++++  .++.|.+||+.+++....+..+..                    .+..++|+|+|+.+++++.+
T Consensus       146 ~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~--------------------~~~~~~~s~dg~~l~~~~~~  205 (353)
T 3vgz_A          146 LVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGK--------------------MSTGLALDSEGKRLYTTNAD  205 (353)
T ss_dssp             EEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCT--------------------TCCCCEEETTTTEEEEECTT
T ss_pred             EEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCC--------------------ccceEEECCCCCEEEEEcCC
Confidence            99999999887776  478899999999998887763322                    46778999999999999999


Q ss_pred             CcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccce
Q psy7108         175 KYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRV  254 (703)
Q Consensus       175 g~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V  254 (703)
                      +.|.+||+.+++....+.....    +....+..++++|+|+.++++...+     ..|.+||..+++....+..+.  .
T Consensus       206 ~~i~~~d~~~~~~~~~~~~~~~----~~~~~~~~~~~s~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~~~~~~~--~  274 (353)
T 3vgz_A          206 GELITIDTADNKILSRKKLLDD----GKEHFFINISLDTARQRAFITDSKA-----AEVLVVDTRNGNILAKVAAPE--S  274 (353)
T ss_dssp             SEEEEEETTTTEEEEEEECCCS----SSCCCEEEEEEETTTTEEEEEESSS-----SEEEEEETTTCCEEEEEECSS--C
T ss_pred             CeEEEEECCCCeEEEEEEcCCC----CCCcccceEEECCCCCEEEEEeCCC-----CEEEEEECCCCcEEEEEEcCC--C
Confidence            9999999999988877764221    1233567899999999887776432     379999999988776666443  2


Q ss_pred             EEEEEcCCCCEEEEEe-CCC-EEEEEcCCCceeccee-----eeEEEccch
Q psy7108         255 FCVKFSPTGQAWVAAT-TEG-VHIYSLDSGYVFDPFL-----LDISITPQS  298 (703)
Q Consensus       255 ~~l~~spdg~~l~s~s-~Dg-v~iwd~~~~~~~~~~~-----~~~~~spd~  298 (703)
                      .+++|+|+|+++++++ .++ |.+||..+++....+.     ..++|+|++
T Consensus       275 ~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg  325 (353)
T 3vgz_A          275 LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADG  325 (353)
T ss_dssp             CCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCSEEEEEEECTTS
T ss_pred             ceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCCCCCeEEEcCCC
Confidence            5699999999776555 567 9999999888755443     568889988

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.77  E-value=7e-18  Score=197.22  Aligned_cols=245  Identities=9%  Similarity=0.044  Sum_probs=175.1

Q ss_pred             CcCeEEEEEcCCCCCCEEEEEeC-CC-----cEEEEEcCCCceeEEEecCC------------------------CcEEE
Q psy7108          47 EGPVSCIEFSPVLSSTGMVSASW-DK-----TVKLWNAVETDTQHETIQLL------------------------SDALC   96 (703)
Q Consensus        47 ~~~V~~l~~sp~~dg~~L~sgs~-Dg-----~V~iWd~~~~~~~~~~~~~~------------------------~~V~~   96 (703)
                      ...+.+++|+|  ||++|++++. |+     +|++||+.+++.......+.                        ..+.+
T Consensus        36 ~~~~~~~~~Sp--dG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  113 (741)
T 2ecf_A           36 GPTLMKPKVAP--DGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVD  113 (741)
T ss_dssp             CCCCEEEEECT--TSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCC
T ss_pred             CCCCCCceEec--CCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcce
Confidence            45799999999  9999999998 88     89999998886544433332                        23788


Q ss_pred             EEEecCCCEEEEEECCCeEEEEEcCCCc--EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC
Q psy7108          97 VAYKPDGTEIVVATLDGQLIMFDVESAA--QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS  174 (703)
Q Consensus        97 v~~spdg~~las~s~dg~I~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d  174 (703)
                      ++|||||++|++++. +.|++||+.+++  ....+..+                    ...+..++|+|||++|++++ +
T Consensus       114 ~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~--------------------~~~~~~~~~SPDG~~la~~~-~  171 (741)
T 2ecf_A          114 YQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHG--------------------EGFATDAKLSPKGGFVSFIR-G  171 (741)
T ss_dssp             CEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCS--------------------SSCEEEEEECTTSSEEEEEE-T
T ss_pred             eEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccC--------------------CcccccccCCCCCCEEEEEe-C
Confidence            999999999999886 999999998872  22223332                    23789999999999999887 4


Q ss_pred             CcEEEEECCCCceEEEEEeccCCcccccc--------ccceeeeeccCCCEEEEEcccCC--------------------
Q psy7108         175 KYICIYSSREGILLKKFTITQNKSLDGIN--------DFINRRKMTEFGNVSLIETRETH--------------------  226 (703)
Q Consensus       175 g~I~lwD~~~~~~~~~~~~~~~~~~~~~~--------~~v~~~~~spdg~~l~~~~~~~~--------------------  226 (703)
                      +.|++||+.+++..............++.        ..+..++|||||+.+++++.++.                    
T Consensus       172 ~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~  251 (741)
T 2ecf_A          172 RNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQ  251 (741)
T ss_dssp             TEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEE
T ss_pred             CcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEe
Confidence            68999999988765433222111001110        12477999999999988765431                    


Q ss_pred             -------CCCeeEEECCCCCC-Cccceeec--CCccceEEEEEcCCCCEEEEEeC-----CC-EEEEEcCCCceeccee-
Q psy7108         227 -------EGGNVVLKLPGVKK-GDMAARVL--KPEVRVFCVKFSPTGQAWVAATT-----EG-VHIYSLDSGYVFDPFL-  289 (703)
Q Consensus       227 -------~~~~~~i~iwd~~~-~~~~~~~~--~h~~~V~~l~~spdg~~l~s~s~-----Dg-v~iwd~~~~~~~~~~~-  289 (703)
                             ......|.+||+.+ ++......  .|...+.+++| |||++|++++.     +. |.+||+.+++....+. 
T Consensus       252 ~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~  330 (741)
T 2ecf_A          252 RYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHE  330 (741)
T ss_dssp             ECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEE
T ss_pred             ecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEc
Confidence                   11223788999988 77654433  47788999999 99999987653     34 8999999887643321 


Q ss_pred             ---------eeEEEccchhhhHhhcCCcceEEEEEEecC
Q psy7108         290 ---------LDISITPQSVKEALADKDYAKALMMSLKLN  319 (703)
Q Consensus       290 ---------~~~~~spd~~~~~l~sg~~~~~l~la~~l~  319 (703)
                               ..++|+||+  .++.+++.++...+ |..+
T Consensus       331 ~~~~~~~~~~~~~~spdg--~~~~~~~~~g~~~l-~~~~  366 (741)
T 2ecf_A          331 TSPTWVPLHNSLRFLDDG--SILWSSERTGFQHL-YRID  366 (741)
T ss_dssp             ECSSCCCCCSCCEECTTS--CEEEEECTTSSCEE-EEEC
T ss_pred             CCCCcCCcCCceEECCCC--eEEEEecCCCccEE-EEEc
Confidence                     368999999  46666666665555 4443

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.76  E-value=7.2e-18  Score=197.15  Aligned_cols=233  Identities=11%  Similarity=0.088  Sum_probs=163.6

Q ss_pred             CeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc--eeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEE
Q psy7108          49 PVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD--TQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQV  126 (703)
Q Consensus        49 ~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~--~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~  126 (703)
                      .|.+++|||  ||++|++++. +.|++||+.++.  ....+..+...+.+++|||||+.|++++ ++.|++||+.+++..
T Consensus       110 ~v~~~~~Sp--Dg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~  185 (741)
T 2ecf_A          110 GIVDYQWSP--DAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQM  185 (741)
T ss_dssp             ESCCCEECT--TSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEE
T ss_pred             CcceeEECC--CCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEE
Confidence            388999999  9999999987 899999998773  4455666778899999999999999987 569999999988765


Q ss_pred             EEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCC-------------------------------
Q psy7108         127 GSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSK-------------------------------  175 (703)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg-------------------------------  175 (703)
                      .....+...... ...+.. .  ......+..++|+|||++|++++.|+                               
T Consensus       186 ~~~~~~~~~~~~-g~~~~v-~--~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~  261 (741)
T 2ecf_A          186 QLTADGSTTIGN-GIAEFV-A--DEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANV  261 (741)
T ss_dssp             ECCCCCCSSEEE-SCCCHH-H--HHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCC
T ss_pred             EeccCCccceec-ccccee-e--eeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCC
Confidence            543332110000 000000 0  00012257799999999999987665                               


Q ss_pred             --cEEEEECCC-CceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCcc
Q psy7108         176 --YICIYSSRE-GILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEV  252 (703)
Q Consensus       176 --~I~lwD~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~  252 (703)
                        .|++||+.+ ++.......      ..+...+..++| |||+.+++.+.+. ...+..|.+||+.+++.......+..
T Consensus       262 ~~~l~~~d~~~~~~~~~~~~~------~~~~~~~~~~~~-pDg~~l~~~~~~~-~~~~~~i~~~d~~~g~~~~~~~~~~~  333 (741)
T 2ecf_A          262 QVKLGVISPAEQAQTQWIDLG------KEQDIYLARVNW-RDPQHLSFQRQSR-DQKKLDLVEVTLASNQQRVLAHETSP  333 (741)
T ss_dssp             EEEEEEECSSTTCCCEEECCC------SCSSEEEEEEEE-EETTEEEEEEEET-TSSEEEEEEEETTTCCEEEEEEEECS
T ss_pred             eeEEEEEECCCCCceEEecCC------CCcceEEEEEEe-CCCCEEEEEEecc-cCCeEEEEEEECCCCceEEEEEcCCC
Confidence              789999988 765433211      124457889999 9999998876532 23346899999999887665554432


Q ss_pred             ----ceEEEEEcCCCCEEEEEeCCC-EEEEEcC-CCceecce------eeeE-EEccch
Q psy7108         253 ----RVFCVKFSPTGQAWVAATTEG-VHIYSLD-SGYVFDPF------LLDI-SITPQS  298 (703)
Q Consensus       253 ----~V~~l~~spdg~~l~s~s~Dg-v~iwd~~-~~~~~~~~------~~~~-~~spd~  298 (703)
                          .+.+++|+|||+++++++.|+ ++||.++ .+. ...+      ...+ .|+|++
T Consensus       334 ~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg  391 (741)
T 2ecf_A          334 TWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKA  391 (741)
T ss_dssp             SCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTT
T ss_pred             CcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCC
Confidence                456899999999888888888 7777765 232 2222      1234 599998

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.75  E-value=2.2e-16  Score=166.48  Aligned_cols=246  Identities=9%  Similarity=0.077  Sum_probs=181.4

Q ss_pred             CCcCeEEEEEcCCCCCCEEEEEeC-------CCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEE-ECCCeEEE
Q psy7108          46 HEGPVSCIEFSPVLSSTGMVSASW-------DKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVA-TLDGQLIM  117 (703)
Q Consensus        46 H~~~V~~l~~sp~~dg~~L~sgs~-------Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~-s~dg~I~v  117 (703)
                      ....+..++|+|  +++.+++++.       ++.|.+||..+++....+ .....+.+++|+|+|+.++++ ..++.|.+
T Consensus        39 ~~~~~~~~~~s~--dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~  115 (353)
T 3vgz_A           39 VGKGAYEMAYSQ--QENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAI-HNDLKPFGATINNTTQTLWFGNTVNSAVTA  115 (353)
T ss_dssp             EESSEEEEEEET--TTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEE-EESSCCCSEEEETTTTEEEEEETTTTEEEE
T ss_pred             hccCccceEECC--CCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEE-ecCCCcceEEECCCCCEEEEEecCCCEEEE
Confidence            345688999999  9998888774       568999999888654444 445567889999999966555 44789999


Q ss_pred             EEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe--cCCcEEEEECCCCceEEEEEecc
Q psy7108         118 FDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG--QSKYICIYSSREGILLKKFTITQ  195 (703)
Q Consensus       118 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s--~dg~I~lwD~~~~~~~~~~~~~~  195 (703)
                      ||..+++.+..+..+......           ......+.+++|+|+|+.+++++  .++.|.+||+.+++.+..+....
T Consensus       116 ~d~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~  184 (353)
T 3vgz_A          116 IDAKTGEVKGRLVLDDRKRTE-----------EVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTG  184 (353)
T ss_dssp             EETTTCCEEEEEESCCCCCCS-----------SCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCC
T ss_pred             EeCCCCeeEEEEecCCCcccc-----------ccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCC
Confidence            999999988887764321000           00011368899999999888776  47889999999998887765222


Q ss_pred             CCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC----CccceEEEEEcCCCCEEEEEeC
Q psy7108         196 NKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK----PEVRVFCVKFSPTGQAWVAATT  271 (703)
Q Consensus       196 ~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~----h~~~V~~l~~spdg~~l~s~s~  271 (703)
                              ..+..++|+|+|+.++++..++      .+.+||..+++....+..    +...+.+++|+|+|+.+++++.
T Consensus       185 --------~~~~~~~~s~dg~~l~~~~~~~------~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~  250 (353)
T 3vgz_A          185 --------KMSTGLALDSEGKRLYTTNADG------ELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDS  250 (353)
T ss_dssp             --------TTCCCCEEETTTTEEEEECTTS------EEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEES
T ss_pred             --------CccceEEECCCCCEEEEEcCCC------eEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeC
Confidence                    2467889999999988877643      788999999887766553    4556888999999998877665


Q ss_pred             C-C-EEEEEcCCCceeccee----eeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108         272 E-G-VHIYSLDSGYVFDPFL----LDISITPQSVKEALADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       272 D-g-v~iwd~~~~~~~~~~~----~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~  321 (703)
                      + + |.+||..+++....+.    ..++|+|++.. ++.+...++.+.+ |+....
T Consensus       251 ~~~~v~~~d~~~~~~~~~~~~~~~~~~~~s~dg~~-l~v~~~~~~~v~~-~d~~~~  304 (353)
T 3vgz_A          251 KAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNE-AYVTHRQAGKVSV-IDAKSY  304 (353)
T ss_dssp             SSSEEEEEETTTCCEEEEEECSSCCCEEEETTTTE-EEEEETTTTEEEE-EETTTT
T ss_pred             CCCEEEEEECCCCcEEEEEEcCCCceEEECCCCCE-EEEEECCCCeEEE-EECCCC
Confidence            5 5 9999999888755443    46889999832 3444445667776 776543

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.75  E-value=1.2e-19  Score=209.47  Aligned_cols=208  Identities=13%  Similarity=0.016  Sum_probs=141.6

Q ss_pred             ccccCCCcCeE---------EEEEc--CCCCCCE-EEEEeC-CCcEEEEEcC--CCceeEEEec-----CCCcEEEEEEe
Q psy7108          41 EVLSGHEGPVS---------CIEFS--PVLSSTG-MVSASW-DKTVKLWNAV--ETDTQHETIQ-----LLSDALCVAYK  100 (703)
Q Consensus        41 ~~l~gH~~~V~---------~l~~s--p~~dg~~-L~sgs~-Dg~V~iWd~~--~~~~~~~~~~-----~~~~V~~v~~s  100 (703)
                      +.+..|...+.         ...|+  |  ||+. |+.++. +..|.+|++.  +......+..     +...+.+++|+
T Consensus        61 ~~l~~~~~~~~~~~~~~~~~~~~~~~SP--Dg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~s  138 (662)
T 3azo_A           61 ESALPAPWNVRNRVFEYSGFPWAGVPRP--AGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLL  138 (662)
T ss_dssp             EESSCTTCCBCCCGGGTCCCCEEEECCS--SSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEE
T ss_pred             ceeCCCCccccccccccCCccceeeeec--CCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEEC
Confidence            66777776766         66676  9  9998 776654 4555556654  2034455554     45678899999


Q ss_pred             cCCCEEEEEECC----------CeEEEEEcCC------CcEEEEEe-ccccCCCCCCCCccchhhcccCCccEEEEEEcC
Q psy7108         101 PDGTEIVVATLD----------GQLIMFDVES------AAQVGSVE-ARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA  163 (703)
Q Consensus       101 pdg~~las~s~d----------g~I~vwd~~~------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp  163 (703)
                      |||+.|++++.+          ..|++||+.+      ++.. .+. .+.                    ..+..++|||
T Consensus       139 pDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~l~~~~~--------------------~~~~~~~~Sp  197 (662)
T 3azo_A          139 PERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR-ELSDDAH--------------------RFVTGPRLSP  197 (662)
T ss_dssp             TTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE-ESSCSCS--------------------SEECCCEECT
T ss_pred             CCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee-EEEecCC--------------------CcccCceECC
Confidence            999999998877          5899999987      5443 232 221                    2577889999


Q ss_pred             CCCEEEEEecC--------CcEEEEECC-CCc--eEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeE
Q psy7108         164 DGSCILAAGQS--------KYICIYSSR-EGI--LLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVV  232 (703)
Q Consensus       164 dg~~l~s~s~d--------g~I~lwD~~-~~~--~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~  232 (703)
                      ||++|+.++.+        ..|++||+. ++.  ....+...       +...+..++|+|||+.++++..+    +...
T Consensus       198 DG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~-------~~~~~~~~~~spdg~l~~~~~~~----~~~~  266 (662)
T 3azo_A          198 DGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGG-------PEEAIAQAEWAPDGSLIVATDRT----GWWN  266 (662)
T ss_dssp             TSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEE-------TTBCEEEEEECTTSCEEEEECTT----SSCE
T ss_pred             CCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCC-------CCceEcceEECCCCeEEEEECCC----CCeE
Confidence            99999987755        379999999 562  22233221       12367889999999955444332    2246


Q ss_pred             EECCCCCCCccceeecCCccc--------eEEEEEcCCCCEEEEEeCCC-EEEE--EcCCCc
Q psy7108         233 LKLPGVKKGDMAARVLKPEVR--------VFCVKFSPTGQAWVAATTEG-VHIY--SLDSGY  283 (703)
Q Consensus       233 i~iwd~~~~~~~~~~~~h~~~--------V~~l~~spdg~~l~s~s~Dg-v~iw--d~~~~~  283 (703)
                      |.+||..+++.......+...        +.+++|+|+++.+++++. + ++||  ++.+++
T Consensus       267 l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~  327 (662)
T 3azo_A          267 LHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE  327 (662)
T ss_dssp             EEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE
T ss_pred             EEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc
Confidence            888888777654433333222        567899999999999988 8 7888  555554

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.75  E-value=1.4e-17  Score=181.81  Aligned_cols=198  Identities=10%  Similarity=0.004  Sum_probs=149.0

Q ss_pred             CcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCC----------ce-----eEEEecCCCcEEEEEEecCCCEEE----
Q psy7108          47 EGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVET----------DT-----QHETIQLLSDALCVAYKPDGTEIV----  107 (703)
Q Consensus        47 ~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~----------~~-----~~~~~~~~~~V~~v~~spdg~~la----  107 (703)
                      ...++.+++++  ++.++++++.|+ +++|+....          ..     ......+...|.+++|+|+|++|+    
T Consensus        36 ~~~~n~lavs~--~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~  112 (434)
T 2oit_A           36 KERSSLLAVSN--KYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMM  112 (434)
T ss_dssp             CSCCBCEEEET--TTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEE
T ss_pred             CCCccEEEEec--CCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEe
Confidence            34688999999  899999999988 889875311          01     112234667899999999999999    


Q ss_pred             EEECCCeEEEEEcCCC--------cE---EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC-CCEEEEEecCC
Q psy7108         108 VATLDGQLIMFDVESA--------AQ---VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD-GSCILAAGQSK  175 (703)
Q Consensus       108 s~s~dg~I~vwd~~~~--------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd-g~~l~s~s~dg  175 (703)
                      +++.|+.|++||++++        +.   ...+.+                    |...|.+++|+|+ +++|++++.|+
T Consensus       113 sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~--------------------h~~~V~~v~~~p~~~~~las~s~Dg  172 (434)
T 2oit_A          113 SSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKD--------------------AGGMVIDMKWNPTVPSMVAVCLADG  172 (434)
T ss_dssp             ETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCS--------------------GGGSEEEEEECSSCTTEEEEEETTS
T ss_pred             ccCCCceEEEEEccccccCCcCCcceeeeeeccCC--------------------CCCceEEEEECCCCCCEEEEEECCC
Confidence            7788999999998754        11   222222                    4458999999998 88999999999


Q ss_pred             cEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC------
Q psy7108         176 YICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK------  249 (703)
Q Consensus       176 ~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~------  249 (703)
                      +|++||++++........        |...+.+++|+|+|+++++++.++      .|++||.+ ++....+..      
T Consensus       173 ~v~iwD~~~~~~~~~~~~--------~~~~v~~v~wspdg~~lasgs~dg------~v~iwd~~-~~~~~~~~~~~~~~~  237 (434)
T 2oit_A          173 SIAVLQVTETVKVCATLP--------STVAVTSVCWSPKGKQLAVGKQNG------TVVQYLPT-LQEKKVIPCPPFYES  237 (434)
T ss_dssp             CEEEEEESSSEEEEEEEC--------GGGCEEEEEECTTSSCEEEEETTS------CEEEECTT-CCEEEEECCCTTCCT
T ss_pred             eEEEEEcCCCcceeeccC--------CCCceeEEEEcCCCCEEEEEcCCC------cEEEEccC-CcccccccCCcccCC
Confidence            999999998866544432        445899999999999999988764      89999998 544444333      


Q ss_pred             -CccceEEEEEcCCCCEEEEEe-CC------C-EEEEEcCCC
Q psy7108         250 -PEVRVFCVKFSPTGQAWVAAT-TE------G-VHIYSLDSG  282 (703)
Q Consensus       250 -h~~~V~~l~~spdg~~l~s~s-~D------g-v~iwd~~~~  282 (703)
                       |...|.+++|++++.++++.+ .+      . +++|++...
T Consensus       238 ~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~  279 (434)
T 2oit_A          238 DHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK  279 (434)
T ss_dssp             TSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred             CCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence             234899999999988875433 33      1 789998754

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.74  E-value=2.1e-17  Score=192.65  Aligned_cols=261  Identities=11%  Similarity=0.049  Sum_probs=170.2

Q ss_pred             EEecCCceeeccCCCccccccccCCCc---CeEEEEEcCCCCCCEEEEEeCC---------CcEEEEEcCCCceeEEEec
Q psy7108          22 VLKLPGVKKGDMAARVLKPEVLSGHEG---PVSCIEFSPVLSSTGMVSASWD---------KTVKLWNAVETDTQHETIQ   89 (703)
Q Consensus        22 ~i~~~~v~~~d~tg~~~~~~~l~gH~~---~V~~l~~sp~~dg~~L~sgs~D---------g~V~iWd~~~~~~~~~~~~   89 (703)
                      .+.+|++.    +|++.  ..+.+|..   .|.+++|||  ||++|++++.+         +.+.+||+.+++. ..+..
T Consensus        38 ~i~~~d~~----~g~~~--~~~~~~~~~~~~v~~~~~Sp--Dg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~  108 (723)
T 1xfd_A           38 TVRLWNVE----TNTST--VLIEGKKIESLRAIRYEISP--DREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDP  108 (723)
T ss_dssp             CEEEBCGG----GCCCE--EEECTTTTTTTTCSEEEECT--TSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCC
T ss_pred             CEEEEECC----CCcEE--EEeccccccccccceEEECC--CCCEEEEEecCccceeecceeeEEEEECCCCce-EeccC
Confidence            34444443    67766  67777765   499999999  99999999875         6788999988754 33332


Q ss_pred             ---CCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCC
Q psy7108          90 ---LLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGS  166 (703)
Q Consensus        90 ---~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~  166 (703)
                         +...+.+++|||||+.||+++. +.|++||+.+++.......+..-.......+. ... ..-.+.+.+++|+|||+
T Consensus       109 ~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~-v~~-ee~~~~~~~~~~SpDg~  185 (723)
T 1xfd_A          109 PEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDW-LYE-EEILKTHIAHWWSPDGT  185 (723)
T ss_dssp             TTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCH-HHH-HTTSSSSEEEEECTTSS
T ss_pred             CccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccce-eEE-EEeccCcceEEECCCCC
Confidence               3334889999999999999875 79999999998876655443210000000000 000 00011347899999999


Q ss_pred             EEEEEecCC----------------------------------cEEEEECCCCceEEEEEeccCCccccccccceeeeec
Q psy7108         167 CILAAGQSK----------------------------------YICIYSSREGILLKKFTITQNKSLDGINDFINRRKMT  212 (703)
Q Consensus       167 ~l~s~s~dg----------------------------------~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  212 (703)
                      .|++++.|+                                  .|++||+.+++....+..+.  ....+...+.+++||
T Consensus       186 ~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~--~~~~~~~~~~~~~~S  263 (723)
T 1xfd_A          186 RLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPD--DPRMREYYITMVKWA  263 (723)
T ss_dssp             EEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCC--CGGGSSEEEEEEEES
T ss_pred             EEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCc--cCCCccceeEEEEEe
Confidence            999887543                                  78999998887545544321  112224578899999


Q ss_pred             cCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC-Cccce----EEEEEcCCCCEEEEE--eCCC-------EEEEE
Q psy7108         213 EFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK-PEVRV----FCVKFSPTGQAWVAA--TTEG-------VHIYS  278 (703)
Q Consensus       213 pdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~-h~~~V----~~l~~spdg~~l~s~--s~Dg-------v~iwd  278 (703)
                      |||+.+++....+  .....|++||+.+++....... +...+    ..++|||||+.|+..  ..++       |.+|+
T Consensus       264 pDg~~l~~~~~~~--~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d  341 (723)
T 1xfd_A          264 TSTKVAVTWLNRA--QNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSS  341 (723)
T ss_dssp             SSSEEEEEEEETT--SCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEEC
T ss_pred             CCCeEEEEEEcCC--CCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEe
Confidence            9999876655432  2346899999999876655433 33333    378999999987653  3443       66777


Q ss_pred             -cCCCce--ecce------ee-eEEEccch
Q psy7108         279 -LDSGYV--FDPF------LL-DISITPQS  298 (703)
Q Consensus       279 -~~~~~~--~~~~------~~-~~~~spd~  298 (703)
                       ..++..  ...+      .. .++|+||+
T Consensus       342 ~~~~~~~~~~~~l~~~~~~~~~~~~~spdg  371 (723)
T 1xfd_A          342 SQPNSSNDNIQSITSGDWDVTKILAYDEKG  371 (723)
T ss_dssp             SSCCSSSCCCCBSCCSSSCEEEEEEEETTT
T ss_pred             ccCCCCccceeEeecCCeEEEeeeEEcCCC
Confidence             344440  1111      11 26899999

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.74  E-value=7.4e-17  Score=168.61  Aligned_cols=219  Identities=16%  Similarity=0.182  Sum_probs=162.5

Q ss_pred             CCCccccccccC-CCc-CeEEEEEcCCCCCCEE-EEEeCCCcEEEEEcCCCceeEEEec-C----CCcEEEEEEecCCCE
Q psy7108          34 AARVLKPEVLSG-HEG-PVSCIEFSPVLSSTGM-VSASWDKTVKLWNAVETDTQHETIQ-L----LSDALCVAYKPDGTE  105 (703)
Q Consensus        34 tg~~~~~~~l~g-H~~-~V~~l~~sp~~dg~~L-~sgs~Dg~V~iWd~~~~~~~~~~~~-~----~~~V~~v~~spdg~~  105 (703)
                      +++.+  ..+.. +.. .+.+++|+|  +++.+ ++++.++.|.+||+.+++....+.. +    ...+.+++|+|+|+.
T Consensus        20 ~~~~~--~~~~~~~~~~~~~~~~~s~--dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~   95 (337)
T 1pby_B           20 KMAVD--KVITIADAGPTPMVPMVAP--GGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKT   95 (337)
T ss_dssp             TTEEE--EEEECTTCTTCCCCEEECT--TSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSE
T ss_pred             CCcEE--EEEEcCCCCCCccceEEcC--CCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCE
Confidence            56666  55542 222 478999999  98765 5566788999999988865544332 2    115678999999999


Q ss_pred             EEEEE------------CCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec
Q psy7108         106 IVVAT------------LDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ  173 (703)
Q Consensus       106 las~s------------~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~  173 (703)
                      +++++            .++.|.+||+.+++....+....                     .+.+++|+|||++|+++  
T Consensus        96 l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~---------------------~~~~~~~s~dg~~l~~~--  152 (337)
T 1pby_B           96 LAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPR---------------------QITMLAWARDGSKLYGL--  152 (337)
T ss_dssp             EEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCS---------------------SCCCEEECTTSSCEEEE--
T ss_pred             EEEEecccccccccccccCceEEEEECCCCcEEEEEeCCC---------------------CcceeEECCCCCEEEEe--
Confidence            98886            57999999999998877766432                     46678999999988887  


Q ss_pred             CCcEEEEECCCCceEEEEEeccC-Cc----cc------------------------------------------------
Q psy7108         174 SKYICIYSSREGILLKKFTITQN-KS----LD------------------------------------------------  200 (703)
Q Consensus       174 dg~I~lwD~~~~~~~~~~~~~~~-~~----~~------------------------------------------------  200 (703)
                      ++.|.+||+.+++....+..... ..    .+                                                
T Consensus       153 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~  232 (337)
T 1pby_B          153 GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA  232 (337)
T ss_dssp             SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE
T ss_pred             CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce
Confidence            68899999999887766654320 00    00                                                


Q ss_pred             -----cccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-E
Q psy7108         201 -----GINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-V  274 (703)
Q Consensus       201 -----~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v  274 (703)
                           .+...+.+++|+|+|+.++++  +      ..|.+||+.+++....+..+ ..+.+++|+|+|+++++++.++ |
T Consensus       233 ~~~~~~~~~~~~~~~~s~dg~~l~~~--~------~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~i  303 (337)
T 1pby_B          233 MREVRIMDVFYFSTAVNPAKTRAFGA--Y------NVLESFDLEKNASIKRVPLP-HSYYSVNVSTDGSTVWLGGALGDL  303 (337)
T ss_dssp             EEEEEECSSCEEEEEECTTSSEEEEE--E------SEEEEEETTTTEEEEEEECS-SCCCEEEECTTSCEEEEESBSSEE
T ss_pred             EeecCCCCCceeeEEECCCCCEEEEe--C------CeEEEEECCCCcCcceecCC-CceeeEEECCCCCEEEEEcCCCcE
Confidence                 001123468999999998887  2      27999999988776665533 4578999999999998888888 9


Q ss_pred             EEEEcCCCceecce
Q psy7108         275 HIYSLDSGYVFDPF  288 (703)
Q Consensus       275 ~iwd~~~~~~~~~~  288 (703)
                      .+||+.+++....+
T Consensus       304 ~v~d~~~~~~~~~~  317 (337)
T 1pby_B          304 AAYDAETLEKKGQV  317 (337)
T ss_dssp             EEEETTTCCEEEEE
T ss_pred             EEEECcCCcEEEEE
Confidence            99999998776544

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.74  E-value=4.5e-16  Score=162.78  Aligned_cols=222  Identities=10%  Similarity=0.140  Sum_probs=156.9

Q ss_pred             ceeecc-CCCc-cccccccCCCcCeEEEEEcCCCCCCEEEEEeCCC---cEEEEEcCCCceeEEEecCCCcEEEEEEecC
Q psy7108          28 VKKGDM-AARV-LKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDK---TVKLWNAVETDTQHETIQLLSDALCVAYKPD  102 (703)
Q Consensus        28 v~~~d~-tg~~-~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg---~V~iWd~~~~~~~~~~~~~~~~V~~v~~spd  102 (703)
                      +..||. +++. .  ..+..+..+..+++|+|  ++++|+++..++   .|++||+.+++... .........+++|+||
T Consensus        64 i~~~d~~~~~~~~--~~~~~~~~~~~~~~~s~--dg~~l~~~~~~~~~~~i~v~d~~~~~~~~-~~~~~~~~~~~~~spd  138 (331)
T 3u4y_A           64 LVQIETQLEPPKV--VAIQEGQSSMADVDITP--DDQFAVTVTGLNHPFNMQSYSFLKNKFIS-TIPIPYDAVGIAISPN  138 (331)
T ss_dssp             EEEEECSSSSCEE--EEEEECSSCCCCEEECT--TSSEEEECCCSSSSCEEEEEETTTTEEEE-EEECCTTEEEEEECTT
T ss_pred             EEEEECCCCceeE--EecccCCCCccceEECC--CCCEEEEecCCCCcccEEEEECCCCCeEE-EEECCCCccceEECCC
Confidence            556663 5665 5  77777877777799999  999999555553   89999998875444 4555667899999999


Q ss_pred             CCEEEEE-ECCCe-EEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe-cCCcEEE
Q psy7108         103 GTEIVVA-TLDGQ-LIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG-QSKYICI  179 (703)
Q Consensus       103 g~~las~-s~dg~-I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s-~dg~I~l  179 (703)
                      |++++++ ..++. |.+|+++....+.... ...+               ........++|+|||+++++++ .++.|.+
T Consensus       139 g~~l~~~~~~~~~~i~~~~~~~~g~~~~~~-~~~~---------------~~~~~~~~~~~spdg~~l~v~~~~~~~v~v  202 (331)
T 3u4y_A          139 GNGLILIDRSSANTVRRFKIDADGVLFDTG-QEFI---------------SGGTRPFNITFTPDGNFAFVANLIGNSIGI  202 (331)
T ss_dssp             SSCEEEEEETTTTEEEEEEECTTCCEEEEE-EEEE---------------CSSSSEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred             CCEEEEEecCCCceEEEEEECCCCcEeecC-Cccc---------------cCCCCccceEECCCCCEEEEEeCCCCeEEE
Confidence            9866554 55578 9999998654332221 1100               1123578999999999766554 6889999


Q ss_pred             EECCCCce---EEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcc--ceeecCC----
Q psy7108         180 YSSREGIL---LKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDM--AARVLKP----  250 (703)
Q Consensus       180 wD~~~~~~---~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~--~~~~~~h----  250 (703)
                      ||+.+++.   +..+...         ..+..++|+|+|++++++...+     ..|.+||..+++.  +..+..+    
T Consensus       203 ~d~~~~~~~~~~~~~~~~---------~~~~~~~~spdg~~l~v~~~~~-----~~i~~~d~~~~~~~~~~~~~~~~~~~  268 (331)
T 3u4y_A          203 LETQNPENITLLNAVGTN---------NLPGTIVVSRDGSTVYVLTEST-----VDVFNFNQLSGTLSFVKSFGHGLLID  268 (331)
T ss_dssp             EECSSTTSCEEEEEEECS---------SCCCCEEECTTSSEEEEECSSE-----EEEEEEETTTTEEEEEEEEECCCCCC
T ss_pred             EECCCCcccceeeeccCC---------CCCceEEECCCCCEEEEEEcCC-----CEEEEEECCCCceeeecccccccccC
Confidence            99999887   6655422         2567899999999887766532     4799999998866  2222211    


Q ss_pred             ccc---eEEEEEcCCCCEEEEEeCC-C-EEEEEcCCCce
Q psy7108         251 EVR---VFCVKFSPTGQAWVAATTE-G-VHIYSLDSGYV  284 (703)
Q Consensus       251 ~~~---V~~l~~spdg~~l~s~s~D-g-v~iwd~~~~~~  284 (703)
                      ...   ...++|+|||++|++++.+ + |.+|++.+...
T Consensus       269 ~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~  307 (331)
T 3u4y_A          269 PRPLFGANQMALNKTETKLFISANISRELKVFTISGKVV  307 (331)
T ss_dssp             CGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEE
T ss_pred             CCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCcc
Confidence            222   3558999999998766654 4 99999986543

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.74  E-value=2.3e-16  Score=177.18  Aligned_cols=236  Identities=8%  Similarity=0.017  Sum_probs=177.1

Q ss_pred             EEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEc--CCCcEEEEEec
Q psy7108          54 EFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDV--ESAAQVGSVEA  131 (703)
Q Consensus        54 ~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~--~~~~~~~~~~~  131 (703)
                      +++|  ++..+++++.|++|.+||..+++....+..+. .+.+++|+|||++|++++.|++|.+||+  .+++.+.++..
T Consensus       144 ~~~p--~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~-~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~  220 (543)
T 1nir_A          144 DLDL--PNLFSVTLRDAGQIALVDGDSKKIVKVIDTGY-AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI  220 (543)
T ss_dssp             CCCG--GGEEEEEEGGGTEEEEEETTTCCEEEEEECST-TEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC
T ss_pred             ccCC--CCEEEEEEcCCCeEEEEECCCceEEEEEecCc-ccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec
Confidence            3889  89999999999999999999887665554333 3899999999999999999999999999  88888887775


Q ss_pred             cccCCCCCCCCccchhhcccCCccEEEEEEcC----CCCEEEEEe-cCCcEEEEECCCCceEEEEEeccCC--cccccc-
Q psy7108         132 RRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA----DGSCILAAG-QSKYICIYSSREGILLKKFTITQNK--SLDGIN-  203 (703)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp----dg~~l~s~s-~dg~I~lwD~~~~~~~~~~~~~~~~--~~~~~~-  203 (703)
                      ..                     .+..++|+|    ||+++++++ .+++|.+||..++++++++..+...  ....+. 
T Consensus       221 g~---------------------~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~  279 (543)
T 1nir_A          221 GI---------------------EARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPE  279 (543)
T ss_dssp             CS---------------------EEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESC
T ss_pred             CC---------------------CcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccC
Confidence            33                     578999999    999999987 4899999999999999888753210  000011 


Q ss_pred             ccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccce-eecCCccceEEEEEcCCCCEEEEEe-CCC-EEEEEcC
Q psy7108         204 DFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAA-RVLKPEVRVFCVKFSPTGQAWVAAT-TEG-VHIYSLD  280 (703)
Q Consensus       204 ~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~-~~~~h~~~V~~l~~spdg~~l~s~s-~Dg-v~iwd~~  280 (703)
                      ..+..+.++|++..++++...+     ..|.+||..+.+.+. ....+...+.+++|+|+|+++++++ .++ |.+||..
T Consensus       280 ~~v~~i~~s~~~~~~~vs~~~~-----g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~  354 (543)
T 1nir_A          280 PRVAAIIASHEHPEFIVNVKET-----GKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSK  354 (543)
T ss_dssp             CCEEEEEECSSSSEEEEEETTT-----TEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETT
T ss_pred             CceEEEEECCCCCEEEEEECCC-----CeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECC
Confidence            2678899999998877766542     389999988765543 1223455688899999999876655 455 9999999


Q ss_pred             CCceecceee--------eEE-EccchhhhHhhcCC-cceEEEEEEecCc
Q psy7108         281 SGYVFDPFLL--------DIS-ITPQSVKEALADKD-YAKALMMSLKLNE  320 (703)
Q Consensus       281 ~~~~~~~~~~--------~~~-~spd~~~~~l~sg~-~~~~l~la~~l~~  320 (703)
                      ++++...+..        ... ++|++- .+++++. .++++.+ |+...
T Consensus       355 tg~l~~~i~~g~~ph~g~g~~~~~p~~g-~~~~s~~~~d~~V~v-~d~~~  402 (543)
T 1nir_A          355 DRRLSALVDVGKTPHPGRGANFVHPKYG-PVWSTSHLGDGSISL-IGTDP  402 (543)
T ss_dssp             TTEEEEEEECSSSBCCTTCEEEEETTTE-EEEEEEBSSSSEEEE-EECCT
T ss_pred             CCeEEEeeccCCCCCCCCCcccCCCCCc-cEEEeccCCCceEEE-EEeCC
Confidence            9987654431        223 356631 4555554 4678877 77764

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.73  E-value=2.3e-18  Score=200.44  Aligned_cols=222  Identities=14%  Similarity=0.092  Sum_probs=153.3

Q ss_pred             CCCcCeEEEEEcCCCCCCEEEEEeCCC-----cEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCe-----
Q psy7108          45 GHEGPVSCIEFSPVLSSTGMVSASWDK-----TVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQ-----  114 (703)
Q Consensus        45 gH~~~V~~l~~sp~~dg~~L~sgs~Dg-----~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~-----  114 (703)
                      +|...+.+++|||  ||++||.++.++     +|++||+.+++.......+ ..+.+++|+|||+.|++++.++.     
T Consensus       122 ~~~~~~~~~~~SP--Dg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~  198 (710)
T 2xdw_A          122 DGTVALRGYAFSE--DGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSD  198 (710)
T ss_dssp             TSCEEEEEEEECT--TSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCS
T ss_pred             CCCEEEEEEEECC--CCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCcccccc
Confidence            4556789999999  999999776543     8999999988654433332 23667999999999999988766     


Q ss_pred             -----------EEEEEcCCCcE--EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec-----CCc
Q psy7108         115 -----------LIMFDVESAAQ--VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ-----SKY  176 (703)
Q Consensus       115 -----------I~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~-----dg~  176 (703)
                                 |++|++.+++.  ...+....                  +...+..++|+|||++|+.++.     +..
T Consensus       199 ~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~------------------~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~  260 (710)
T 2xdw_A          199 GTETSTNLHQKLYYHVLGTDQSEDILCAEFPD------------------EPKWMGGAELSDDGRYVLLSIREGCDPVNR  260 (710)
T ss_dssp             SSCCCCCCCCEEEEEETTSCGGGCEEEECCTT------------------CTTCEEEEEECTTSCEEEEEEECSSSSCCE
T ss_pred             ccccccCCCCEEEEEECCCCcccceEEeccCC------------------CCeEEEEEEEcCCCCEEEEEEEccCCCccE
Confidence                       99999988762  22222211                  1225788999999999988764     568


Q ss_pred             EEEEECCC------Cc-eEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcc--ceee
Q psy7108         177 ICIYSSRE------GI-LLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDM--AARV  247 (703)
Q Consensus       177 I~lwD~~~------~~-~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~--~~~~  247 (703)
                      |++||+.+      +. ....+..+..        .+. ..|+|+|+.+++.+..+  .....|.+||+.+++.  ...+
T Consensus       261 l~~~d~~~~~~~~~~~~~~~~l~~~~~--------~~~-~~~s~dg~~l~~~s~~~--~~~~~l~~~d~~~~~~~~~~~l  329 (710)
T 2xdw_A          261 LWYCDLQQESNGITGILKWVKLIDNFE--------GEY-DYVTNEGTVFTFKTNRH--SPNYRLINIDFTDPEESKWKVL  329 (710)
T ss_dssp             EEEEEGGGSSSSSCSSCCCEEEECSSS--------SCE-EEEEEETTEEEEEECTT--CTTCEEEEEETTSCCGGGCEEE
T ss_pred             EEEEECcccccccCCccceEEeeCCCC--------cEE-EEEeccCCEEEEEECCC--CCCCEEEEEeCCCCCcccceec
Confidence            99999986      43 3444443322        222 25889999888776543  2235789999887642  3444


Q ss_pred             cCCcc--ceEEEEEcCCCCEEEEEeCCC---EEEEEcCCCceecce------eeeEEEccch
Q psy7108         248 LKPEV--RVFCVKFSPTGQAWVAATTEG---VHIYSLDSGYVFDPF------LLDISITPQS  298 (703)
Q Consensus       248 ~~h~~--~V~~l~~spdg~~l~s~s~Dg---v~iwd~~~~~~~~~~------~~~~~~spd~  298 (703)
                      ..|..  .+.+++|++++..+++...++   |.+|++.+++....+      ...++++|++
T Consensus       330 ~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~  391 (710)
T 2xdw_A          330 VPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKD  391 (710)
T ss_dssp             ECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTC
T ss_pred             cCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCC
Confidence            45543  688899998777888888888   567777666543322      2346677766

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.73  E-value=1.9e-18  Score=202.07  Aligned_cols=241  Identities=13%  Similarity=0.101  Sum_probs=147.0

Q ss_pred             eeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEe-cCCCcE-------------
Q psy7108          29 KKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETI-QLLSDA-------------   94 (703)
Q Consensus        29 ~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~-~~~~~V-------------   94 (703)
                      .+||..+...  ..+..|.+.+..++|||  ||+.||.++ |+.|++|++.++....... ++...+             
T Consensus        95 ~~~d~~~~~~--~~l~~~~~~~~~~~~SP--dG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~  169 (740)
T 4a5s_A           95 DIYDLNKRQL--ITEERIPNNTQWVTWSP--VGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEV  169 (740)
T ss_dssp             EEEETTTTEE--CCSSCCCTTEEEEEECS--STTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHT
T ss_pred             EEEECCCCcE--EEcccCCCcceeeEECC--CCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchh
Confidence            3677555545  57888889999999999  999999985 6899999998775332222 122222             


Q ss_pred             ----EEEEEecCCCEEEEEECCCe------------------------------------EEEEEcCC---Cc--EEEEE
Q psy7108          95 ----LCVAYKPDGTEIVVATLDGQ------------------------------------LIMFDVES---AA--QVGSV  129 (703)
Q Consensus        95 ----~~v~~spdg~~las~s~dg~------------------------------------I~vwd~~~---~~--~~~~~  129 (703)
                          .++.|||||+.||.++.|.+                                    |++||+.+   ++  ....+
T Consensus       170 ~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l  249 (740)
T 4a5s_A          170 FSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQI  249 (740)
T ss_dssp             SSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEE
T ss_pred             cCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEe
Confidence                34899999999998865432                                    44455544   31  11111


Q ss_pred             eccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec----CCcEEEEECCCCc----eEE--EEEeccCCcc
Q psy7108         130 EARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ----SKYICIYSSREGI----LLK--KFTITQNKSL  199 (703)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~----dg~I~lwD~~~~~----~~~--~~~~~~~~~~  199 (703)
                      ...              .....+...+..++|+|||+.++....    +..|.+||+.+++    +..  .+..      
T Consensus       250 ~~~--------------~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~------  309 (740)
T 4a5s_A          250 TAP--------------ASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIE------  309 (740)
T ss_dssp             CCC--------------HHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEE------
T ss_pred             cCC--------------ccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeee------
Confidence            110              000124557899999999997765432    2369999999887    221  1100      


Q ss_pred             ccccccce-----eeeeccCCCEEE-EEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEE-EEeC-
Q psy7108         200 DGINDFIN-----RRKMTEFGNVSL-IETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWV-AATT-  271 (703)
Q Consensus       200 ~~~~~~v~-----~~~~spdg~~l~-~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~-s~s~-  271 (703)
                      .++..++.     .++|+|||+.++ ..+..   ++...|.+||..+++... +......+..+. .+|++.++ +++. 
T Consensus       310 ~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~---~G~~~l~~~~~~~~~~~~-lT~g~~~v~~~~-~~d~~~i~f~~~~~  384 (740)
T 4a5s_A          310 MSTTGWVGRFRPSEPHFTLDGNSFYKIISNE---EGYRHICYFQIDKKDCTF-ITKGTWEVIGIE-ALTSDYLYYISNEY  384 (740)
T ss_dssp             ECSSSCSSSSSCCCCEECTTSSEEEEEEECT---TSCEEEEEEETTCSSCEE-SCCSSSCEEEEE-EECSSEEEEEESCG
T ss_pred             ccCCceEccCcCCCceEcCCCCEEEEEEEcC---CCceEEEEEECCCCceEe-cccCCEEEEEEE-EEeCCEEEEEEecC
Confidence            11222333     689999999877 44432   345789999998776554 444455566654 24566664 4443 


Q ss_pred             -C--C-EEEEE--cCCCce---ec-------ceeeeEEEccchh
Q psy7108         272 -E--G-VHIYS--LDSGYV---FD-------PFLLDISITPQSV  299 (703)
Q Consensus       272 -D--g-v~iwd--~~~~~~---~~-------~~~~~~~~spd~~  299 (703)
                       +  + ..||.  +.++..   +.       ......+|+|++.
T Consensus       385 ~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~  428 (740)
T 4a5s_A          385 KGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAK  428 (740)
T ss_dssp             GGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSS
T ss_pred             CCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCCC
Confidence             2  2 45554  443322   11       1234678899883

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.73  E-value=1.2e-16  Score=174.37  Aligned_cols=212  Identities=11%  Similarity=0.105  Sum_probs=150.7

Q ss_pred             CCCcCeEEEEEcCCCCCCEEE----EEeCCCcEEEEEcCCC--------ce---eEEEecCCCcEEEEEEecC-CCEEEE
Q psy7108          45 GHEGPVSCIEFSPVLSSTGMV----SASWDKTVKLWNAVET--------DT---QHETIQLLSDALCVAYKPD-GTEIVV  108 (703)
Q Consensus        45 gH~~~V~~l~~sp~~dg~~L~----sgs~Dg~V~iWd~~~~--------~~---~~~~~~~~~~V~~v~~spd-g~~las  108 (703)
                      .|.+.|++++|+|  ++++|+    +|+.|++|++||+.+.        +.   ......|...|.+++|+|+ +.+|++
T Consensus        90 ~~~~~v~~l~~sp--dg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las  167 (434)
T 2oit_A           90 PMKFPIHHLALSC--DNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAV  167 (434)
T ss_dssp             CCSSCEEEEEECT--TSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEE
T ss_pred             cCCCcccEEEEcC--CCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEE
Confidence            3567899999999  999999    8889999999998654        11   2223348889999999998 789999


Q ss_pred             EECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceE
Q psy7108         109 ATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILL  188 (703)
Q Consensus       109 ~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~  188 (703)
                      ++.||+|++||++++.......+|..                    .|.+++|+|+|++|++|+.|++|++||++ ++..
T Consensus       168 ~s~Dg~v~iwD~~~~~~~~~~~~~~~--------------------~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~  226 (434)
T 2oit_A          168 CLADGSIAVLQVTETVKVCATLPSTV--------------------AVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEK  226 (434)
T ss_dssp             EETTSCEEEEEESSSEEEEEEECGGG--------------------CEEEEEECTTSSCEEEEETTSCEEEECTT-CCEE
T ss_pred             EECCCeEEEEEcCCCcceeeccCCCC--------------------ceeEEEEcCCCCEEEEEcCCCcEEEEccC-Cccc
Confidence            99999999999999876655555443                    89999999999999999999999999998 6666


Q ss_pred             EEEEeccCCccccccccceeeeeccCCCEEEEEcc-cCCCCCeeEEECCCCCCCccc-----eeec-------CCccceE
Q psy7108         189 KKFTITQNKSLDGINDFINRRKMTEFGNVSLIETR-ETHEGGNVVLKLPGVKKGDMA-----ARVL-------KPEVRVF  255 (703)
Q Consensus       189 ~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~-~~~~~~~~~i~iwd~~~~~~~-----~~~~-------~h~~~V~  255 (703)
                      ..+..+... ...+...+.+++|++++.++++.+. +|..+....+++|++++.+..     ..+.       ....+..
T Consensus       227 ~~~~~~~~~-~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~  305 (434)
T 2oit_A          227 KVIPCPPFY-ESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHY  305 (434)
T ss_dssp             EEECCCTTC-CTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCE
T ss_pred             ccccCCccc-CCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcce
Confidence            665543321 1123347899999998887755443 222233346889988765211     1111       1111222


Q ss_pred             EEEEcCCCCEEEEEeCCC--EEEEEcC
Q psy7108         256 CVKFSPTGQAWVAATTEG--VHIYSLD  280 (703)
Q Consensus       256 ~l~~spdg~~l~s~s~Dg--v~iwd~~  280 (703)
                      .+.+-++.+.+++++...  |.|....
T Consensus       306 ~~~~l~dw~l~~v~s~~s~dv~vl~~~  332 (434)
T 2oit_A          306 YLSYIEEWDLVLAASAASTEVSILARQ  332 (434)
T ss_dssp             EEEEEGGGTEEEEEETTCSBCEEEEEC
T ss_pred             eeehhccCCEEEEecCCCCceeEEEec
Confidence            333447778876666554  7666644

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.72  E-value=7.4e-16  Score=162.59  Aligned_cols=220  Identities=13%  Similarity=0.123  Sum_probs=146.7

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEe-CCCcEEEEEcCCCceeEEE--ecCC----------CcEEEEEEecCCCEEE
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSAS-WDKTVKLWNAVETDTQHET--IQLL----------SDALCVAYKPDGTEIV  107 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs-~Dg~V~iWd~~~~~~~~~~--~~~~----------~~V~~v~~spdg~~la  107 (703)
                      ..+..|...+..++|+|  +|++|++++ .+++|++|++.........  ..+.          ..+.+++|+|||+.++
T Consensus        79 ~~~~~~~~~p~~~a~sp--dg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v  156 (347)
T 3hfq_A           79 NTVVAPGTPPAYVAVDE--ARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAV  156 (347)
T ss_dssp             EEEEEESCCCSEEEEET--TTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEE
T ss_pred             eeeecCCCCCEEEEECC--CCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEE
Confidence            44455778899999999  999888887 7799999999643322222  2221          2488999999999656


Q ss_pred             EEECCCeEEEEEcC-CCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEE-ecCCcEEEEECCC-
Q psy7108         108 VATLDGQLIMFDVE-SAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAA-GQSKYICIYSSRE-  184 (703)
Q Consensus       108 s~s~dg~I~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~-s~dg~I~lwD~~~-  184 (703)
                      +...++.|.+||+. +++..........                 .+.....++|+|||++++++ ..++.|.+|++.. 
T Consensus       157 ~~~~~~~v~~~~~~~~g~~~~~~~~~~~-----------------~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~  219 (347)
T 3hfq_A          157 IDLGSDKVYVYNVSDAGQLSEQSVLTME-----------------AGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQ  219 (347)
T ss_dssp             EETTTTEEEEEEECTTSCEEEEEEEECC-----------------TTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETT
T ss_pred             EeCCCCEEEEEEECCCCcEEEeeeEEcC-----------------CCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCC
Confidence            66668899999998 5543322111100                 01256789999999977664 5678999999874 


Q ss_pred             -CceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCC-C--ccceeecCCccceEEEEEc
Q psy7108         185 -GILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKK-G--DMAARVLKPEVRVFCVKFS  260 (703)
Q Consensus       185 -~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~-~--~~~~~~~~h~~~V~~l~~s  260 (703)
                       ++............-......+..++|+|||++++++...+     ..|.+|++.. +  +.+..+..+...+.+++|+
T Consensus       220 ~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~-----~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~s  294 (347)
T 3hfq_A          220 TGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGY-----NTLAVFAVTADGHLTLIQQISTEGDFPRDFDLD  294 (347)
T ss_dssp             TTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETT-----TEEEEEEECGGGCEEEEEEEECSSSCCCEEEEC
T ss_pred             CCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCC-----CEEEEEEECCCCcEEEeEEEecCCCCcCeEEEC
Confidence             54322211111100000113577899999999887665432     3799999863 2  3444455556678899999


Q ss_pred             CCCCEEEEEeCC-C-EEEEEc--CCCce
Q psy7108         261 PTGQAWVAATTE-G-VHIYSL--DSGYV  284 (703)
Q Consensus       261 pdg~~l~s~s~D-g-v~iwd~--~~~~~  284 (703)
                      |||++|++++.+ + +.+|++  .+++.
T Consensus       295 pdg~~l~v~~~~~~~v~v~~~d~~tg~l  322 (347)
T 3hfq_A          295 PTEAFVVVVNQNTDNATLYARDLTSGKL  322 (347)
T ss_dssp             TTSSEEEEEETTTTEEEEEEECTTTCCE
T ss_pred             CCCCEEEEEEcCCCcEEEEEEeCCCCeE
Confidence            999999888765 5 999955  45554

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.72  E-value=6.4e-16  Score=161.84  Aligned_cols=213  Identities=9%  Similarity=0.113  Sum_probs=145.2

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeC-CCcEEEEEcCCCc--eeEEEecCCCcEEEEEEecCCCEEEEEE-CCCeEE
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASW-DKTVKLWNAVETD--TQHETIQLLSDALCVAYKPDGTEIVVAT-LDGQLI  116 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~-Dg~V~iWd~~~~~--~~~~~~~~~~~V~~v~~spdg~~las~s-~dg~I~  116 (703)
                      ..+..+. .+.+++|+|  ++++|++++. ++.|.+||+.++.  ...........+.+++|+|+|+.+++++ .++.|.
T Consensus        78 ~~~~~~~-~~~~~~~s~--dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~  154 (343)
T 1ri6_A           78 AESALPG-SLTHISTDH--QGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRIC  154 (343)
T ss_dssp             EEEECSS-CCSEEEECT--TSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEE
T ss_pred             cccccCC-CCcEEEEcC--CCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEE
Confidence            3444444 789999999  9998876654 8899999995332  2233344556789999999999888887 899999


Q ss_pred             EEEcCC-CcEEEEE----eccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe-cCCcEEEEECCC--Cce-
Q psy7108         117 MFDVES-AAQVGSV----EARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG-QSKYICIYSSRE--GIL-  187 (703)
Q Consensus       117 vwd~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s-~dg~I~lwD~~~--~~~-  187 (703)
                      +||+.+ ++.....    ..+                   .+..+..++|+|+++++++++ .++.|.+||+..  ++. 
T Consensus       155 ~~d~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~  215 (343)
T 1ri6_A          155 LFTVSDDGHLVAQDPAEVTTV-------------------EGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIE  215 (343)
T ss_dssp             EEEECTTSCEEEEEEEEEECS-------------------TTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCE
T ss_pred             EEEecCCCceeeecccccccC-------------------CCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEE
Confidence            999987 6543222    111                   122678899999999776654 789999999953  433 


Q ss_pred             -EEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC--CC--ccceeecCCccceEEEEEcCC
Q psy7108         188 -LKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK--KG--DMAARVLKPEVRVFCVKFSPT  262 (703)
Q Consensus       188 -~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~--~~--~~~~~~~~h~~~V~~l~~spd  262 (703)
                       .........  .......+..++|+|+|+.++++...+     ..+.+||+.  ++  +.+..+..+.. +.+++|+|+
T Consensus       216 ~~~~~~~~~~--~~~~~~~~~~i~~s~dg~~l~v~~~~~-----~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~d  287 (343)
T 1ri6_A          216 CVQTLDMMPE--NFSDTRWAADIHITPDGRHLYACDRTA-----SLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHS  287 (343)
T ss_dssp             EEEEEECSCT--TCCSCCCEEEEEECTTSSEEEEEETTT-----TEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTT
T ss_pred             EEeeccccCc--cccccCCccceEECCCCCEEEEEecCC-----CEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCC
Confidence             222221110  001123456799999999888665432     379999987  32  33333444433 889999999


Q ss_pred             CCEEEEEe-CCC-EEEEEcC--CCc
Q psy7108         263 GQAWVAAT-TEG-VHIYSLD--SGY  283 (703)
Q Consensus       263 g~~l~s~s-~Dg-v~iwd~~--~~~  283 (703)
                      |++|++++ .++ +.+|+++  +++
T Consensus       288 g~~l~~~~~~~~~v~v~~~d~~~g~  312 (343)
T 1ri6_A          288 GKYLIAAGQKSHHISVYEIVGEQGL  312 (343)
T ss_dssp             SSEEEEECTTTCEEEEEEEETTTTE
T ss_pred             CCEEEEecCCCCeEEEEEEcCCCce
Confidence            99988887 466 9999554  554

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.72  E-value=7.1e-16  Score=162.74  Aligned_cols=258  Identities=10%  Similarity=0.117  Sum_probs=163.4

Q ss_pred             CCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeC---CCcEEEEEcCCCce--eEEEecCCCcEEEEEEecCCCEEEE
Q psy7108          34 AARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASW---DKTVKLWNAVETDT--QHETIQLLSDALCVAYKPDGTEIVV  108 (703)
Q Consensus        34 tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~---Dg~V~iWd~~~~~~--~~~~~~~~~~V~~v~~spdg~~las  108 (703)
                      +|++. ......+......++|+|  +|+ |++++.   ++.|++|++.++..  ......+...+..++|+|||++|++
T Consensus        27 tg~~~-~~~~~~~~~~p~~~a~sp--dg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~  102 (347)
T 3hfq_A           27 AKTLT-NDGLLAATQNPTYLALSA--KDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYS  102 (347)
T ss_dssp             TTEEE-EEEEEEECSCCCCEEECT--TCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEE
T ss_pred             CCeEE-EeeeeeccCCcceEEEcc--CCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEE
Confidence            55543 112344567788899999  998 555543   68999999976642  2233446778899999999999988


Q ss_pred             EE-CCCeEEEEEcCC-Cc--EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECC-
Q psy7108         109 AT-LDGQLIMFDVES-AA--QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSR-  183 (703)
Q Consensus       109 ~s-~dg~I~vwd~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~-  183 (703)
                      ++ .++.|.+||+.. +.  .+..+.....   +.   .     .......+.+++|+|||+.+++...++.|.+||+. 
T Consensus       103 ~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~---~p---~-----~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~  171 (347)
T 3hfq_A          103 ANYHKGTAEVMKIAADGALTLTDTVQHSGH---GP---R-----PEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSD  171 (347)
T ss_dssp             EETTTTEEEEEEECTTSCEEEEEEEECCCC---CS---S-----TTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECT
T ss_pred             EeCCCCEEEEEEeCCCCCeeecceeecCCC---CC---C-----ccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECC
Confidence            88 678999999963 33  2222221110   00   0     01123358899999999955566678899999998 


Q ss_pred             CCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCC--Ccc--ceeecCCc------cc
Q psy7108         184 EGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKK--GDM--AARVLKPE------VR  253 (703)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~--~~~--~~~~~~h~------~~  253 (703)
                      +++..........     .......++|+|||++++++...+     ..+.+|++..  ++.  ........      ..
T Consensus       172 ~g~~~~~~~~~~~-----~g~~p~~~~~spdg~~l~v~~~~~-----~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~  241 (347)
T 3hfq_A          172 AGQLSEQSVLTME-----AGFGPRHLVFSPDGQYAFLAGELS-----SQIASLKYDTQTGAFTQLGIVKTIPADYTAHNG  241 (347)
T ss_dssp             TSCEEEEEEEECC-----TTCCEEEEEECTTSSEEEEEETTT-----TEEEEEEEETTTTEEEEEEEEESSCTTCCSCCE
T ss_pred             CCcEEEeeeEEcC-----CCCCCceEEECCCCCEEEEEeCCC-----CEEEEEEecCCCCceEEeeeeeecCCCCCCCCc
Confidence            5543322111110     112456799999999777765432     3788898764  432  22222211      45


Q ss_pred             eEEEEEcCCCCEEE-EEeCCC-EEEEEcCCC---ceecc------eeeeEEEccchhhhHhhcCC-cceEEEEEEecC
Q psy7108         254 VFCVKFSPTGQAWV-AATTEG-VHIYSLDSG---YVFDP------FLLDISITPQSVKEALADKD-YAKALMMSLKLN  319 (703)
Q Consensus       254 V~~l~~spdg~~l~-s~s~Dg-v~iwd~~~~---~~~~~------~~~~~~~spd~~~~~l~sg~-~~~~l~la~~l~  319 (703)
                      +..++|+|||++|+ +...++ |.+|+++..   +....      ....++|+|++  ..+...+ .++.+.+ |+++
T Consensus       242 ~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg--~~l~v~~~~~~~v~v-~~~d  316 (347)
T 3hfq_A          242 AAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTE--AFVVVVNQNTDNATL-YARD  316 (347)
T ss_dssp             EEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTS--SEEEEEETTTTEEEE-EEEC
T ss_pred             ceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCC--CEEEEEEcCCCcEEE-EEEe
Confidence            88999999999884 555567 999998732   22221      23568999999  5444443 3466666 6554

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.71  E-value=2.8e-16  Score=160.33  Aligned_cols=213  Identities=12%  Similarity=0.096  Sum_probs=150.9

Q ss_pred             ceeecc-C-CCccccccccCC-CcCeEEEEEcCCCCCCEEEEEe--CCCcEEEEEcCCCceeEEEecCCCcEEEEEEecC
Q psy7108          28 VKKGDM-A-ARVLKPEVLSGH-EGPVSCIEFSPVLSSTGMVSAS--WDKTVKLWNAVETDTQHETIQLLSDALCVAYKPD  102 (703)
Q Consensus        28 v~~~d~-t-g~~~~~~~l~gH-~~~V~~l~~sp~~dg~~L~sgs--~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spd  102 (703)
                      +.+||. + ++..  ....+| ...+.+++|+|  ++++|++++  .++..+||.+...............+.+++|+||
T Consensus        64 i~~~d~~~~~~~~--~~~~~~~~~~~~~~~~sp--dg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~spd  139 (297)
T 2ojh_A           64 LYRLSLAGDPSPE--KVDTGFATICNNDHGISP--DGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLPSYWHGWSPD  139 (297)
T ss_dssp             EEEEESSSCCSCE--ECCCTTCCCBCSCCEECT--TSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSSEEEEEECTT
T ss_pred             EEEEeCCCCCCce--EeccccccccccceEECC--CCCEEEEEEeCCCCcceEEEEECCCCceEEeecCCCccceEECCC
Confidence            556664 4 4555  555566 47899999999  999999998  4456666665422222333444456899999999


Q ss_pred             CCEEE-EEECCCeEEEEEcC--CCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe-cCCcEE
Q psy7108         103 GTEIV-VATLDGQLIMFDVE--SAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG-QSKYIC  178 (703)
Q Consensus       103 g~~la-s~s~dg~I~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s-~dg~I~  178 (703)
                      ++.|+ +++.++.+.+|+++  +++. ..+..+                    ...+.+++|+|+|+.|++++ .++.+.
T Consensus       140 g~~l~~~~~~~~~~~l~~~~~~~~~~-~~~~~~--------------------~~~~~~~~~s~dg~~l~~~~~~~~~~~  198 (297)
T 2ojh_A          140 GKSFTYCGIRDQVFDIYSMDIDSGVE-TRLTHG--------------------EGRNDGPDYSPDGRWIYFNSSRTGQMQ  198 (297)
T ss_dssp             SSEEEEEEEETTEEEEEEEETTTCCE-EECCCS--------------------SSCEEEEEECTTSSEEEEEECTTSSCE
T ss_pred             CCEEEEEECCCCceEEEEEECCCCcc-eEcccC--------------------CCccccceECCCCCEEEEEecCCCCcc
Confidence            99887 67789999999864  3333 333332                    23789999999999888766 588999


Q ss_pred             EEECC-CCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCC-----CeeEEECCCCCCCccce--eecCC
Q psy7108         179 IYSSR-EGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEG-----GNVVLKLPGVKKGDMAA--RVLKP  250 (703)
Q Consensus       179 lwD~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~-----~~~~i~iwd~~~~~~~~--~~~~h  250 (703)
                      +|++. .+.....+..        +...+.+++|+|+|+.+++.+.++...     ....|.+||+.+++...  ...+|
T Consensus       199 i~~~~~~~~~~~~~~~--------~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~  270 (297)
T 2ojh_A          199 IWRVRVDGSSVERITD--------SAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGG  270 (297)
T ss_dssp             EEEEETTSSCEEECCC--------CSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEES
T ss_pred             EEEECCCCCCcEEEec--------CCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCC
Confidence            99886 4444444432        234778899999999988877643111     23579999998886533  33367


Q ss_pred             ccceEEEEEcCCCCEEEEEeCCC
Q psy7108         251 EVRVFCVKFSPTGQAWVAATTEG  273 (703)
Q Consensus       251 ~~~V~~l~~spdg~~l~s~s~Dg  273 (703)
                      ...+.+++|+|+|+.|++++.+.
T Consensus       271 ~~~~~~~~~spdg~~l~~~~~~~  293 (297)
T 2ojh_A          271 QGTMNSPNWSPDGDEFAYVRYFP  293 (297)
T ss_dssp             TTTSCSCCBCTTSSEEEEEEECC
T ss_pred             CcccccceECCCCCEEEEEEecc
Confidence            78899999999999998877653

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.70  E-value=6.4e-18  Score=196.19  Aligned_cols=201  Identities=8%  Similarity=-0.024  Sum_probs=135.0

Q ss_pred             CCCcCeEEEEEcCCCCCCEEEE-----EeCCCcEEEEEcCCCcee-EEEecCCCcEEEEEEecCCCEEEEEECCCe----
Q psy7108          45 GHEGPVSCIEFSPVLSSTGMVS-----ASWDKTVKLWNAVETDTQ-HETIQLLSDALCVAYKPDGTEIVVATLDGQ----  114 (703)
Q Consensus        45 gH~~~V~~l~~sp~~dg~~L~s-----gs~Dg~V~iWd~~~~~~~-~~~~~~~~~V~~v~~spdg~~las~s~dg~----  114 (703)
                      +|...+.+++|||  ||++||.     |+.+.+|++||+.+++.. ...... .....++|+|||+.|++++.|..    
T Consensus       118 ~~~~~~~~~~~SP--DG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~-~~~~~~~wspDg~~l~~~~~d~~~~~~  194 (695)
T 2bkl_A          118 DGTVSLGTWAVSW--DGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEG-GKYATPKWTPDSKGFYYEWLPTDPSIK  194 (695)
T ss_dssp             SSCEEEEEEEECT--TSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSC-CTTCCCEECTTSSEEEEEECCCCTTSC
T ss_pred             CCCEEEEEEEECC--CCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCc-ccccceEEecCCCEEEEEEecCCCCCc
Confidence            5666899999999  9999984     444568999999988643 111111 11267999999999999988776    


Q ss_pred             ---------EEEEEcCCCcE--EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCC----cEEE
Q psy7108         115 ---------LIMFDVESAAQ--VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSK----YICI  179 (703)
Q Consensus       115 ---------I~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg----~I~l  179 (703)
                               |++|++.+++.  ...+....                  +...+..+.|+|||++|+.++.++    .|++
T Consensus       195 ~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~------------------~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~  256 (695)
T 2bkl_A          195 VDERPGYTTIRYHTLGTEPSKDTVVHERTG------------------DPTTFLQSDLSRDGKYLFVYILRGWSENDVYW  256 (695)
T ss_dssp             GGGGGGGCEEEEEETTSCGGGCEEEECCCC------------------CTTCEEEEEECTTSCCEEEEEEETTTEEEEEE
T ss_pred             cccCCCCCEEEEEECCCCchhceEEEecCC------------------CCEEEEEEEECCCCCEEEEEEeCCCCceEEEE
Confidence                     99999988762  22232211                  123688999999999998877665    6778


Q ss_pred             EECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcc--ceeecC-C-ccceE
Q psy7108         180 YSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDM--AARVLK-P-EVRVF  255 (703)
Q Consensus       180 wD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~--~~~~~~-h-~~~V~  255 (703)
                      ||..++.. ..+..+..        .+....+ ++|. +++.+..+  ..+..|.+||+.+++.  ...+.. + ...+.
T Consensus       257 ~~~~~~~~-~~l~~~~~--------~~~~~~~-~~g~-l~~~s~~~--~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~  323 (695)
T 2bkl_A          257 KRPGEKDF-RLLVKGVG--------AKYEVHA-WKDR-FYVLTDEG--APRQRVFEVDPAKPARASWKEIVPEDSSASLL  323 (695)
T ss_dssp             ECTTCSSC-EEEEECSS--------CCEEEEE-ETTE-EEEEECTT--CTTCEEEEEBTTBCSGGGCEEEECCCSSCEEE
T ss_pred             EcCCCCce-EEeecCCC--------ceEEEEe-cCCc-EEEEECCC--CCCCEEEEEeCCCCCccCCeEEecCCCCCeEE
Confidence            87665543 33332222        3344444 6777 55554432  2235899999987753  233333 3 45688


Q ss_pred             EEEEcCCCCEEEEEeCCC-EEEEEcC
Q psy7108         256 CVKFSPTGQAWVAATTEG-VHIYSLD  280 (703)
Q Consensus       256 ~l~~spdg~~l~s~s~Dg-v~iwd~~  280 (703)
                      +++|+ ++..+++...|+ .+||.++
T Consensus       324 ~~~~~-~~~lv~~~~~dg~~~l~~~~  348 (695)
T 2bkl_A          324 SVSIV-GGHLSLEYLKDATSEVRVAT  348 (695)
T ss_dssp             EEEEE-TTEEEEEEEETTEEEEEEEE
T ss_pred             EEEEE-CCEEEEEEEECCEEEEEEEe
Confidence            89998 667778888888 6666544

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.70  E-value=7.9e-16  Score=161.70  Aligned_cols=230  Identities=10%  Similarity=0.128  Sum_probs=164.9

Q ss_pred             EEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCC--cEEEEEEecCCCEEEE-EECCCeEEEEEcCCCcEEEE
Q psy7108          52 CIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLS--DALCVAYKPDGTEIVV-ATLDGQLIMFDVESAAQVGS  128 (703)
Q Consensus        52 ~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~--~V~~v~~spdg~~las-~s~dg~I~vwd~~~~~~~~~  128 (703)
                      ++++++  ++.++++++.+++|++||+.+++....+. ...  .+..++|+|+|+.+++ +..++.|.+||+.+++....
T Consensus         4 g~~~~~--~~~~~v~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~   80 (349)
T 1jmx_B            4 GPALKA--GHEYMIVTNYPNNLHVVDVASDTVYKSCV-MPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFH   80 (349)
T ss_dssp             CCCCCT--TCEEEEEEETTTEEEEEETTTTEEEEEEE-CSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred             cccccC--CCEEEEEeCCCCeEEEEECCCCcEEEEEe-cCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEE
Confidence            456777  88999999999999999998875544443 333  6789999999987654 44688999999999988777


Q ss_pred             EeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC------------CcEEEEECCCCceE---EEEEe
Q psy7108         129 VEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS------------KYICIYSSREGILL---KKFTI  193 (703)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d------------g~I~lwD~~~~~~~---~~~~~  193 (703)
                      +......              ......+..++|+|||+++++++.+            +.|.+||+.+++..   ..+..
T Consensus        81 ~~~~~~~--------------~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~  146 (349)
T 1jmx_B           81 ANLSSVP--------------GEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM  146 (349)
T ss_dssp             EESCCST--------------TEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC
T ss_pred             EEccccc--------------ccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC
Confidence            6542210              0001135679999999999998865            89999999885432   33321


Q ss_pred             ccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCc----------------------
Q psy7108         194 TQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPE----------------------  251 (703)
Q Consensus       194 ~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~----------------------  251 (703)
                               ...+.+++|+|+|+ +++.+.        .+.+||..+++....+..+.                      
T Consensus       147 ---------~~~~~~~~~s~dg~-l~~~~~--------~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (349)
T 1jmx_B          147 ---------PRQVYLMRAADDGS-LYVAGP--------DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRH  208 (349)
T ss_dssp             ---------CSSCCCEEECTTSC-EEEESS--------SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTC
T ss_pred             ---------CCcccceeECCCCc-EEEccC--------cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcce
Confidence                     12467889999999 555322        38899998887655443221                      


Q ss_pred             ----------------------------------------------cceEEEEEcC-CCCEEEEEeCCC-EEEEEcCCCc
Q psy7108         252 ----------------------------------------------VRVFCVKFSP-TGQAWVAATTEG-VHIYSLDSGY  283 (703)
Q Consensus       252 ----------------------------------------------~~V~~l~~sp-dg~~l~s~s~Dg-v~iwd~~~~~  283 (703)
                                                                    ..+.+++|+| +|++++++  ++ |.+||+.+++
T Consensus       209 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~  286 (349)
T 1jmx_B          209 EFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRK  286 (349)
T ss_dssp             EEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTE
T ss_pred             eEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCe
Confidence                                                          1345678889 99999888  66 9999999987


Q ss_pred             eecce-----eeeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108         284 VFDPF-----LLDISITPQSVKEALADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       284 ~~~~~-----~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~  321 (703)
                      ....+     ...++|+|++  ..+..++.++.+.+ |+....
T Consensus       287 ~~~~~~~~~~~~~~~~s~dg--~~l~~~~~~~~v~v-~d~~~~  326 (349)
T 1jmx_B          287 LIKAANLDHTYYCVAFDKKG--DKLYLGGTFNDLAV-FNPDTL  326 (349)
T ss_dssp             EEEEEECSSCCCEEEECSSS--SCEEEESBSSEEEE-EETTTT
T ss_pred             EEEEEcCCCCccceEECCCC--CEEEEecCCCeEEE-Eecccc
Confidence            65443     3568999998  44555566688887 887654

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.70  E-value=2e-15  Score=157.60  Aligned_cols=222  Identities=11%  Similarity=0.128  Sum_probs=160.2

Q ss_pred             CEEEEEeCCCcEEEEEcCCCceeEEEecCCC---cEEEEEEecCCCEEEE-EECCCeEEEEEcCCCcEEEEEeccccCCC
Q psy7108          62 TGMVSASWDKTVKLWNAVETDTQHETIQLLS---DALCVAYKPDGTEIVV-ATLDGQLIMFDVESAAQVGSVEARRDLDS  137 (703)
Q Consensus        62 ~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~---~V~~v~~spdg~~las-~s~dg~I~vwd~~~~~~~~~~~~~~~~~~  137 (703)
                      +++++++.+++|++||+.+++....+ ....   .+.+++|+|+|+.+++ +..++.|.+||+.+++.+..+.....   
T Consensus         2 ~~~v~~~~~~~v~~~d~~~~~~~~~~-~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~---   77 (337)
T 1pby_B            2 DYILAPARPDKLVVIDTEKMAVDKVI-TIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTP---   77 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEE-ECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBT---
T ss_pred             cEEEEcCCCCeEEEEECCCCcEEEEE-EcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCc---
Confidence            57899999999999999888554444 3333   5889999999987654 45578999999999988877654210   


Q ss_pred             CCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe------------cCCcEEEEECCCCceEEEEEeccCCcccccccc
Q psy7108         138 GRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG------------QSKYICIYSSREGILLKKFTITQNKSLDGINDF  205 (703)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s------------~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~  205 (703)
                                  ..+...+..++|+|+|+.+++++            .++.|.+||+.+++.+..+...         ..
T Consensus        78 ------------~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~---------~~  136 (337)
T 1pby_B           78 ------------EERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAP---------RQ  136 (337)
T ss_dssp             ------------TEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECC---------SS
T ss_pred             ------------ccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCC---------CC
Confidence                        00011345789999999998886            5799999999998887766532         24


Q ss_pred             ceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeec-------------------------------------
Q psy7108         206 INRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL-------------------------------------  248 (703)
Q Consensus       206 v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~-------------------------------------  248 (703)
                      +..++|+|+|+.++++..        .+.+||+.+++....+.                                     
T Consensus       137 ~~~~~~s~dg~~l~~~~~--------~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~  208 (337)
T 1pby_B          137 ITMLAWARDGSKLYGLGR--------DLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKD  208 (337)
T ss_dssp             CCCEEECTTSSCEEEESS--------SEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTT
T ss_pred             cceeEECCCCCEEEEeCC--------eEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccc
Confidence            567889999998777621        46777766654332221                                     


Q ss_pred             -----------------------------CCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecce-----eeeEE
Q psy7108         249 -----------------------------KPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPF-----LLDIS  293 (703)
Q Consensus       249 -----------------------------~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~-----~~~~~  293 (703)
                                                   .+...+.+++|+|||++++++  ++ |.+||+.+++....+     ...++
T Consensus       209 ~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~  286 (337)
T 1pby_B          209 IDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPHSYYSVN  286 (337)
T ss_dssp             SCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEE
T ss_pred             cccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCCCceeeEE
Confidence                                         112235579999999999888  56 999999988765443     35689


Q ss_pred             EccchhhhHhhcCCcceEEEEEEecCch
Q psy7108         294 ITPQSVKEALADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       294 ~spd~~~~~l~sg~~~~~l~la~~l~~~  321 (703)
                      |+|++  ..+..+..++.+.+ |++...
T Consensus       287 ~s~dg--~~l~~~~~~~~i~v-~d~~~~  311 (337)
T 1pby_B          287 VSTDG--STVWLGGALGDLAA-YDAETL  311 (337)
T ss_dssp             ECTTS--CEEEEESBSSEEEE-EETTTC
T ss_pred             ECCCC--CEEEEEcCCCcEEE-EECcCC
Confidence            99999  55555566788887 887654

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.69  E-value=8.1e-16  Score=161.62  Aligned_cols=224  Identities=13%  Similarity=0.090  Sum_probs=158.6

Q ss_pred             ceeec-cCCCccccccccCCC-cCeEEEEEcCCCCCCEE-EEEeCCCcEEEEEcCCCceeEEEecCC------CcEEEEE
Q psy7108          28 VKKGD-MAARVLKPEVLSGHE-GPVSCIEFSPVLSSTGM-VSASWDKTVKLWNAVETDTQHETIQLL------SDALCVA   98 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l~gH~-~~V~~l~~sp~~dg~~L-~sgs~Dg~V~iWd~~~~~~~~~~~~~~------~~V~~v~   98 (703)
                      +.+|| .+++.+  ..+..+. ..+..++|+|  +++.+ ++++.++.|.+||+.+++.........      ..+.+++
T Consensus        23 v~~~d~~~~~~~--~~~~~~~~~~~~~~~~s~--dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~   98 (349)
T 1jmx_B           23 LHVVDVASDTVY--KSCVMPDKFGPGTAMMAP--DNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFA   98 (349)
T ss_dssp             EEEEETTTTEEE--EEEECSSCCSSCEEEECT--TSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEE
T ss_pred             EEEEECCCCcEE--EEEecCCCCCCceeEECC--CCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceE
Confidence            34455 366766  6665443 2578999999  99865 455678999999998876554443222      2377899


Q ss_pred             EecCCCEEEEEECC------------CeEEEEEcCCCcEE---EEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC
Q psy7108          99 YKPDGTEIVVATLD------------GQLIMFDVESAAQV---GSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA  163 (703)
Q Consensus        99 ~spdg~~las~s~d------------g~I~vwd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp  163 (703)
                      |+|||+++++++.+            +.|.+||+.+++..   ..+...                     ..+.+++|+|
T Consensus        99 ~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~---------------------~~~~~~~~s~  157 (349)
T 1jmx_B           99 ISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMP---------------------RQVYLMRAAD  157 (349)
T ss_dssp             ECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECC---------------------SSCCCEEECT
T ss_pred             ECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCC---------------------CcccceeECC
Confidence            99999999998865            89999999875432   222222                     1477899999


Q ss_pred             CCCEEEEEecCCcEEEEECCCCceEEEEEeccCCcc--------------------------------------------
Q psy7108         164 DGSCILAAGQSKYICIYSSREGILLKKFTITQNKSL--------------------------------------------  199 (703)
Q Consensus       164 dg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~--------------------------------------------  199 (703)
                      ||+ +++++  +.|.+||+.+++.+..+........                                            
T Consensus       158 dg~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~  234 (349)
T 1jmx_B          158 DGS-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYG  234 (349)
T ss_dssp             TSC-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEE
T ss_pred             CCc-EEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCcccccccee
Confidence            999 66654  3499999999988776653320000                                            


Q ss_pred             ----------------ccccccceeeeecc-CCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCC
Q psy7108         200 ----------------DGINDFINRRKMTE-FGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPT  262 (703)
Q Consensus       200 ----------------~~~~~~v~~~~~sp-dg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spd  262 (703)
                                      ......+..++++| +|+.++++  +      ..|.+||+.+++....+.. ...+.+++|+|+
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~------~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~d  305 (349)
T 1jmx_B          235 YLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--L------NRLAKYDLKQRKLIKAANL-DHTYYCVAFDKK  305 (349)
T ss_dssp             EEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--E------SEEEEEETTTTEEEEEEEC-SSCCCEEEECSS
T ss_pred             EEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--c------CeEEEEECccCeEEEEEcC-CCCccceEECCC
Confidence                            00011345677889 99988887  2      3799999999887666553 335779999999


Q ss_pred             CCEEEEEeCCC-EEEEEcCCCceecce
Q psy7108         263 GQAWVAATTEG-VHIYSLDSGYVFDPF  288 (703)
Q Consensus       263 g~~l~s~s~Dg-v~iwd~~~~~~~~~~  288 (703)
                      |++|++++.++ |.+||..+++....+
T Consensus       306 g~~l~~~~~~~~v~v~d~~~~~~~~~~  332 (349)
T 1jmx_B          306 GDKLYLGGTFNDLAVFNPDTLEKVKNI  332 (349)
T ss_dssp             SSCEEEESBSSEEEEEETTTTEEEEEE
T ss_pred             CCEEEEecCCCeEEEEeccccceeeee
Confidence            99998888888 999999988766544

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.68  E-value=6.5e-16  Score=175.42  Aligned_cols=228  Identities=12%  Similarity=0.051  Sum_probs=164.2

Q ss_pred             CcCeEEEEEcCCCCCCEEEEEeC-CCcEEEEEcCCCceeEEEecCC-CcEEEEEEecCCCEEEEEEC---CCeEEEEEcC
Q psy7108          47 EGPVSCIEFSPVLSSTGMVSASW-DKTVKLWNAVETDTQHETIQLL-SDALCVAYKPDGTEIVVATL---DGQLIMFDVE  121 (703)
Q Consensus        47 ~~~V~~l~~sp~~dg~~L~sgs~-Dg~V~iWd~~~~~~~~~~~~~~-~~V~~v~~spdg~~las~s~---dg~I~vwd~~  121 (703)
                      ..+|++++|+|  ||+.||+++. ||+++||++.++ ....+..+. ..+.+++|+|| +.+++++.   +....+|.++
T Consensus        21 ~~~~~~~~~~~--DG~~la~~s~~~g~~~lw~~~~g-~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~   96 (582)
T 3o4h_A           21 AVEKYSLQGVV--DGDKLLVVGFSEGSVNAYLYDGG-ETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVN   96 (582)
T ss_dssp             HSCEEEEEEEE--TTTEEEEEEEETTEEEEEEEETT-EEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEE
T ss_pred             ccchheeecCC--CCCeEEEEEccCCceeEEEEcCC-CcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEe
Confidence            56899999999  9999999887 999999998555 556666666 58999999999 77777765   4545565443


Q ss_pred             C---CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCE-EEEEecCCcEEEEECCCCceEEEEEeccCC
Q psy7108         122 S---AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSC-ILAAGQSKYICIYSSREGILLKKFTITQNK  197 (703)
Q Consensus       122 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~-l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~  197 (703)
                      .   +... .+....                     .+...+|+|||+. +++.+.++.+.+||+.+++.......+   
T Consensus        97 ~~~~g~~~-~l~~~~---------------------~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~---  151 (582)
T 3o4h_A           97 TSRPGEEQ-RLEAVK---------------------PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLP---  151 (582)
T ss_dssp             TTSTTCCE-ECTTSC---------------------SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEES---
T ss_pred             ccCCCccc-cccCCC---------------------CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCC---
Confidence            2   2222 222211                     2345688888864 333444455669999988765543311   


Q ss_pred             ccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC---E
Q psy7108         198 SLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG---V  274 (703)
Q Consensus       198 ~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg---v  274 (703)
                              ..+++|||||+.+++++.++  ++...|++||+.+++.. .+..|...+.+++|||||+.|+++..++   |
T Consensus       152 --------~~~~~~spDG~~la~~~~~~--~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i  220 (582)
T 3o4h_A          152 --------GFGFVSDIRGDLIAGLGFFG--GGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARL  220 (582)
T ss_dssp             --------SCEEEEEEETTEEEEEEEEE--TTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEE
T ss_pred             --------CceEEECCCCCEEEEEEEcC--CCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEE
Confidence                    16789999999999777552  22257999999888754 5677888899999999999999887777   8


Q ss_pred             EEEEcCCCceeccee------eeEE--------EccchhhhHhhcCCcceEEEEEEec
Q psy7108         275 HIYSLDSGYVFDPFL------LDIS--------ITPQSVKEALADKDYAKALMMSLKL  318 (703)
Q Consensus       275 ~iwd~~~~~~~~~~~------~~~~--------~spd~~~~~l~sg~~~~~l~la~~l  318 (703)
                      ++||+++++.. ...      ..+.        |+||+  .++++++.++.+.+ |.+
T Consensus       221 ~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg--~~~~~~~~~g~~~l-~~~  274 (582)
T 3o4h_A          221 VTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDG--RLAVVARREGRSAV-FID  274 (582)
T ss_dssp             EEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTS--CEEEEEEETTEEEE-EET
T ss_pred             EEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCC--cEEEEEEcCCcEEE-EEE
Confidence            89999888765 221      2355        99999  67777777777777 665

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.66  E-value=2e-16  Score=184.36  Aligned_cols=223  Identities=11%  Similarity=0.069  Sum_probs=154.3

Q ss_pred             EEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCC---cEEEEEEecCCCEEEEEEC---------CCeEEEEE
Q psy7108          52 CIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLS---DALCVAYKPDGTEIVVATL---------DGQLIMFD  119 (703)
Q Consensus        52 ~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~---~V~~v~~spdg~~las~s~---------dg~I~vwd  119 (703)
                      +++|+|  ++.+++ .+.|++|++||+.+++....+..+..   .+.+++|||||++|++++.         ++.|++||
T Consensus        20 ~~~~s~--dg~~~~-~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d   96 (719)
T 1z68_A           20 FPNWIS--GQEYLH-QSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYD   96 (719)
T ss_dssp             CCEESS--SSEEEE-ECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred             ccEECC--CCeEEE-EcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEE
Confidence            789999  996555 45699999999988865433333322   3899999999999999876         68999999


Q ss_pred             cCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEE-eccCCc
Q psy7108         120 VESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFT-ITQNKS  198 (703)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~-~~~~~~  198 (703)
                      +.+++.+....-                     ...+..++|||||+.|+++. ++.|++||+.+++...... ++....
T Consensus        97 ~~~g~~~~~~~l---------------------~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v  154 (719)
T 1z68_A           97 LSNGEFVRGNEL---------------------PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKI  154 (719)
T ss_dssp             TTTTEECCSSCC---------------------CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTE
T ss_pred             CCCCccccceec---------------------CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCe
Confidence            998875210000                     01477899999999999885 7899999999887654221 111111


Q ss_pred             ccccccc---------ceeeeeccCCCEEEEEcccCCC----------------------------CCeeEEECCCCCCC
Q psy7108         199 LDGINDF---------INRRKMTEFGNVSLIETRETHE----------------------------GGNVVLKLPGVKKG  241 (703)
Q Consensus       199 ~~~~~~~---------v~~~~~spdg~~l~~~~~~~~~----------------------------~~~~~i~iwd~~~~  241 (703)
                      ..++...         ..+++|||||+.+++++.++..                            .....+++||+.++
T Consensus       155 ~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~  234 (719)
T 1z68_A          155 FNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYP  234 (719)
T ss_dssp             EESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCH
T ss_pred             EcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCC
Confidence            1222222         2589999999999987754211                            12347899999888


Q ss_pred             ccc--------eeecCCccceEEEEEcCCCCEEEEEeC--CC---EEEEE----cCCCceecce----------ee----
Q psy7108         242 DMA--------ARVLKPEVRVFCVKFSPTGQAWVAATT--EG---VHIYS----LDSGYVFDPF----------LL----  290 (703)
Q Consensus       242 ~~~--------~~~~~h~~~V~~l~~spdg~~l~s~s~--Dg---v~iwd----~~~~~~~~~~----------~~----  290 (703)
                      +..        ..+.+|...+.+++||||++.+++...  ++   |.+||    ..+++.....          ..    
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  314 (719)
T 1z68_A          235 AYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFV  314 (719)
T ss_dssp             HHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSC
T ss_pred             CccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccC
Confidence            653        123457888999999999877766432  22   77889    7776654332          12    


Q ss_pred             -eEEEccchh
Q psy7108         291 -DISITPQSV  299 (703)
Q Consensus       291 -~~~~spd~~  299 (703)
                       ...|+||+.
T Consensus       315 ~~~~~spdg~  324 (719)
T 1z68_A          315 STPVFSYDAI  324 (719)
T ss_dssp             CCCEECTTSS
T ss_pred             CccEECCCCC
Confidence             578999983

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.66  E-value=5e-15  Score=158.48  Aligned_cols=232  Identities=8%  Similarity=-0.009  Sum_probs=162.1

Q ss_pred             cCCCccccccccCCCcCeEE-----EEEcCCCCCCEEEEEeC-CCc--EEEEEcCCCceeEEEec-CCCcEEEEEEecCC
Q psy7108          33 MAARVLKPEVLSGHEGPVSC-----IEFSPVLSSTGMVSASW-DKT--VKLWNAVETDTQHETIQ-LLSDALCVAYKPDG  103 (703)
Q Consensus        33 ~tg~~~~~~~l~gH~~~V~~-----l~~sp~~dg~~L~sgs~-Dg~--V~iWd~~~~~~~~~~~~-~~~~V~~v~~spdg  103 (703)
                      .+|..+  ..++.|......     .+|+|  ||+.|++++. ++.  |.+||+.+++. ..+.. +...+.+++|+|||
T Consensus        18 ~~g~~~--~~lt~~~~~~~~~~~~~~~~Sp--Dg~~l~~~~~~~g~~~l~~~d~~~g~~-~~lt~~~~~~~~~~~~spdg   92 (388)
T 3pe7_A           18 STGAQV--TRLTPPDVTCHRNYFYQKCFTR--DGSKLLFGGAFDGPWNYYLLDLNTQVA-TQLTEGRGDNTFGGFLSPDD   92 (388)
T ss_dssp             TTCCEE--EECSCTTSCEECCCTTSCCBCT--TSCEEEEEECTTSSCEEEEEETTTCEE-EECCCSSCBCSSSCEECTTS
T ss_pred             CCCcce--EEecCCcccccchhhcCccCCC--CCCEEEEEEcCCCCceEEEEeCCCCce-EEeeeCCCCCccceEEcCCC
Confidence            567777  888888877766     89999  9999999887 674  77788877743 33333 44444567899999


Q ss_pred             CEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEE--EEcCCCCEEEEE----------
Q psy7108         104 TEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTV--CYSADGSCILAA----------  171 (703)
Q Consensus       104 ~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i--~~spdg~~l~s~----------  171 (703)
                      +.|++++.++.|++||+.+++.......+..                    .+...  .++|+++.++..          
T Consensus        93 ~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~--------------------~~~~~~~~~~~dg~~l~~~~~~~~~~~~~  152 (388)
T 3pe7_A           93 DALFYVKDGRNLMRVDLATLEENVVYQVPAE--------------------WVGYGTWVANSDCTKLVGIEIRREDWVPL  152 (388)
T ss_dssp             SEEEEEETTTEEEEEETTTCCEEEEEECCTT--------------------EEEEEEEEECTTSSEEEEEEEEGGGCCCC
T ss_pred             CEEEEEeCCCeEEEEECCCCcceeeeechhh--------------------cccccceeECCCCCeeccccccCcccccc
Confidence            9999999999999999999987766654432                    33333  348999988743          


Q ss_pred             ------------ecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeecc-CCCEEEEEcccCCCCCeeEEECCCC
Q psy7108         172 ------------GQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTE-FGNVSLIETRETHEGGNVVLKLPGV  238 (703)
Q Consensus       172 ------------s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-dg~~l~~~~~~~~~~~~~~i~iwd~  238 (703)
                                  ..+..|.+||+.+++...... +.        ..+..++|+| ||+.+++....+.+.....|.++|.
T Consensus       153 ~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~--------~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~  223 (388)
T 3pe7_A          153 TDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQ-EN--------QWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINE  223 (388)
T ss_dssp             CSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEE-ES--------SCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEET
T ss_pred             cccchhhhhhccCCcceEEEEECCCCceEEeec-CC--------ccccccEECCCCCCEEEEEEecCCCCCcceEEEEeC
Confidence                        234679999999987554432 22        2578899999 9998887765432222346778887


Q ss_pred             CCCccceeecCCc--cceEEEEEcCCCCEEEEEeCC-----C-EEEEEcCCCceecc--ee---------eeEEEccchh
Q psy7108         239 KKGDMAARVLKPE--VRVFCVKFSPTGQAWVAATTE-----G-VHIYSLDSGYVFDP--FL---------LDISITPQSV  299 (703)
Q Consensus       239 ~~~~~~~~~~~h~--~~V~~l~~spdg~~l~s~s~D-----g-v~iwd~~~~~~~~~--~~---------~~~~~spd~~  299 (703)
                      ..++.. .+..+.  ..+..++|||||+.|+..+.+     . |.+||+.+++....  +.         ....|+||+.
T Consensus       224 ~~~~~~-~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~  302 (388)
T 3pe7_A          224 DGTNMR-KVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGS  302 (388)
T ss_dssp             TSCCCE-ESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEEC
T ss_pred             CCCceE-EeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCC
Confidence            665443 333333  357889999999988654432     2 88999998874221  11         1236899983

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.65  E-value=6.8e-15  Score=178.63  Aligned_cols=225  Identities=8%  Similarity=-0.103  Sum_probs=165.5

Q ss_pred             eeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEE
Q psy7108          30 KGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVA  109 (703)
Q Consensus        30 ~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~  109 (703)
                      +|+..+...  ..+.+|...+.+++|+|  ||++|++++.++.|++||+.+++.......|...+.+++|+|||++|+++
T Consensus       363 ~~d~~~~~~--~~l~~~~~~~~~~~~Sp--DG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~  438 (1045)
T 1k32_A          363 IYDYRTGKA--EKFEENLGNVFAMGVDR--NGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYG  438 (1045)
T ss_dssp             EEETTTCCE--EECCCCCCSEEEEEECT--TSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEE
T ss_pred             EEECCCCCc--eEecCCccceeeeEECC--CCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEE
Confidence            335444444  45568889999999999  99999999999999999998886555554788889999999999999988


Q ss_pred             ECCC----------eEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEE
Q psy7108         110 TLDG----------QLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICI  179 (703)
Q Consensus       110 s~dg----------~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~l  179 (703)
                      +.++          .|++||+.+++ ...+..+..                    .+..++|+|||+.|++++.++...+
T Consensus       439 ~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~--------------------~~~~~~~spdG~~l~~~s~~~~~~~  497 (1045)
T 1k32_A          439 FPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENS--------------------HDYAPAFDADSKNLYYLSYRSLDPS  497 (1045)
T ss_dssp             EEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSS--------------------BEEEEEECTTSCEEEEEESCCCCCE
T ss_pred             ecCccccccCCCCCeEEEEECCCCc-EEEeeCCCc--------------------ccCCceEcCCCCEEEEEecccCCcC
Confidence            7654          89999999887 445544433                    6788999999999999998888888


Q ss_pred             EECCCCce-------EEEEEecc----------------------------CCccccccccceeeeeccCCCEEEEEccc
Q psy7108         180 YSSREGIL-------LKKFTITQ----------------------------NKSLDGINDFINRRKMTEFGNVSLIETRE  224 (703)
Q Consensus       180 wD~~~~~~-------~~~~~~~~----------------------------~~~~~~~~~~v~~~~~spdg~~l~~~~~~  224 (703)
                      |+......       ...+....                            ...+..+...+..++++|||+.+++....
T Consensus       498 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~  577 (1045)
T 1k32_A          498 PDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVH  577 (1045)
T ss_dssp             ECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCC
T ss_pred             cchhccccccccCceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEeccc
Confidence            87654322       11111000                            00111233467789999999877752110


Q ss_pred             C-------CCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCCEEEEEcCCCc
Q psy7108         225 T-------HEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYSLDSGY  283 (703)
Q Consensus       225 ~-------~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dgv~iwd~~~~~  283 (703)
                      +       .......+.+||+.+++.....    ..+.+++|||||+.|++++.+++++|++.+++
T Consensus       578 g~~~~~~~~~~~~~~l~~~d~~~~~~~~l~----~~v~~~~~S~DG~~l~~~~~~~i~~~d~~~~~  639 (1045)
T 1k32_A          578 GEFAAYYQGAPEKGVLLKYDVKTRKVTEVK----NNLTDLRLSADRKTVMVRKDDGKIYTFPLEKP  639 (1045)
T ss_dssp             CSHHHHHHCCCCCEEEEEEETTTCCEEEEE----EEEEEEEECTTSCEEEEEETTSCEEEEESSCT
T ss_pred             CcccccccccCCCceEEEEECCCCcEEEee----cCcceEEECCCCCEEEEEcCCcEEEEeCccCc
Confidence            0       0122357899999888753322    56889999999999999988889999998876

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.65  E-value=5.3e-15  Score=179.59  Aligned_cols=200  Identities=8%  Similarity=-0.022  Sum_probs=161.0

Q ss_pred             CCcCeEEEEEc-CCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCC-cEEEEEEecCCCEEEEEECCCeEE-EEEcCC
Q psy7108          46 HEGPVSCIEFS-PVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLS-DALCVAYKPDGTEIVVATLDGQLI-MFDVES  122 (703)
Q Consensus        46 H~~~V~~l~~s-p~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~-~V~~v~~spdg~~las~s~dg~I~-vwd~~~  122 (703)
                      |...+.+++|+ |  ||+.|++++ ++.+.+|++.++. ...+..+.. .+.+++|+ ||+.|++++.++.+. +||+.+
T Consensus       294 ~~~~v~~~~~S~p--dG~~la~~~-~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~  368 (1045)
T 1k32_A          294 SIPSKFAEDFSPL--DGDLIAFVS-RGQAFIQDVSGTY-VLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRT  368 (1045)
T ss_dssp             ECGGGGEEEEEEC--GGGCEEEEE-TTEEEEECTTSSB-EEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTT
T ss_pred             cccccceeeecCC--CCCEEEEEE-cCEEEEEcCCCCc-eEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCC
Confidence            44579999999 9  999999988 7899999987764 444556777 89999999 999999999888899 999987


Q ss_pred             CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccc
Q psy7108         123 AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGI  202 (703)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~  202 (703)
                      ++... +..+.                    ..+..++|+|||+.|++++.++.|++||+.+++.......+.       
T Consensus       369 ~~~~~-l~~~~--------------------~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~-------  420 (1045)
T 1k32_A          369 GKAEK-FEENL--------------------GNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSRE-------  420 (1045)
T ss_dssp             CCEEE-CCCCC--------------------CSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSS-------
T ss_pred             CCceE-ecCCc--------------------cceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCC-------
Confidence            76543 22332                    378999999999999999999999999999998776654433       


Q ss_pred             cccceeeeeccCCCEEEEEcccC----CCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEE
Q psy7108         203 NDFINRRKMTEFGNVSLIETRET----HEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIY  277 (703)
Q Consensus       203 ~~~v~~~~~spdg~~l~~~~~~~----~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iw  277 (703)
                       ..+.+++|||||+++++++.++    .......|++||+.+++ ...+..|...+.+++|+|||++|++++.++ ..+|
T Consensus       421 -~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~  498 (1045)
T 1k32_A          421 -AMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSP  498 (1045)
T ss_dssp             -SCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEE
T ss_pred             -CCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCc
Confidence             3778899999999998876532    01234689999999887 566777888899999999999999988876 6677


Q ss_pred             EcC
Q psy7108         278 SLD  280 (703)
Q Consensus       278 d~~  280 (703)
                      +..
T Consensus       499 ~~~  501 (1045)
T 1k32_A          499 DRV  501 (1045)
T ss_dssp             CSS
T ss_pred             chh
Confidence            643

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.64  E-value=3.1e-16  Score=182.65  Aligned_cols=245  Identities=11%  Similarity=0.047  Sum_probs=157.6

Q ss_pred             ceeecc-CCCccccccccCCCc---CeEEEEEcCCCCCCEEEEEeC---------CCcEEEEEcCCCceeEEEecCCCcE
Q psy7108          28 VKKGDM-AARVLKPEVLSGHEG---PVSCIEFSPVLSSTGMVSASW---------DKTVKLWNAVETDTQHETIQLLSDA   94 (703)
Q Consensus        28 v~~~d~-tg~~~~~~~l~gH~~---~V~~l~~sp~~dg~~L~sgs~---------Dg~V~iWd~~~~~~~~~~~~~~~~V   94 (703)
                      +.+||. +|++.  ..+.+|..   .+.+++|||  ||++|++++.         |++|++||+.+++... .......+
T Consensus        38 i~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~Sp--Dg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~-~~~l~~~~  112 (719)
T 1z68_A           38 IVLYNIETGQSY--TILSNRTMKSVNASNYGLSP--DRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVR-GNELPRPI  112 (719)
T ss_dssp             EEEEESSSCCEE--EEECHHHHHTTTCSEEEECT--TSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC-SSCCCSSB
T ss_pred             EEEEEcCCCcEE--EEEccccccccceeeEEECC--CCCeEEEEecCceeEEeecceEEEEEECCCCcccc-ceecCccc
Confidence            455663 55655  55555544   489999999  9999999876         7899999998874310 01223568


Q ss_pred             EEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEe-ccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec
Q psy7108          95 LCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVE-ARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ  173 (703)
Q Consensus        95 ~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~  173 (703)
                      .+++|||||+.||++. ++.|++||+.+++...... ++...... ...+.....  .-.....+++|||||+.|++++.
T Consensus       113 ~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~-g~~~~v~~e--e~~~~~~~~~wSPDG~~la~~~~  188 (719)
T 1z68_A          113 QYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFN-GIPDWVYEE--EMLATKYALWWSPNGKFLAYAEF  188 (719)
T ss_dssp             CCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEE-SSCCHHHHH--HTTCSSCCEEECTTSSEEEEEEE
T ss_pred             ccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEc-ccccceeee--ecccCcccEEECCCCCEEEEEEE
Confidence            8999999999999985 7899999999887654321 11100000 000000000  00012247999999999999875


Q ss_pred             CC----------------------------------cEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEE
Q psy7108         174 SK----------------------------------YICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSL  219 (703)
Q Consensus       174 dg----------------------------------~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~  219 (703)
                      |.                                  .|++||+.+++....+.......+.++...+.+++||||++.++
T Consensus       189 d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~  268 (719)
T 1z68_A          189 NDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCL  268 (719)
T ss_dssp             ECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEE
T ss_pred             CCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEE
Confidence            52                                  78899998876421111111111234556789999999987655


Q ss_pred             EEcccCCCCCeeEEECCC----CCCCccceee----cCCccceE-----EEEEcCCCCEEEE--EeCCC---EEEEEcCC
Q psy7108         220 IETRETHEGGNVVLKLPG----VKKGDMAARV----LKPEVRVF-----CVKFSPTGQAWVA--ATTEG---VHIYSLDS  281 (703)
Q Consensus       220 ~~~~~~~~~~~~~i~iwd----~~~~~~~~~~----~~h~~~V~-----~l~~spdg~~l~s--~s~Dg---v~iwd~~~  281 (703)
                      +....  ......|.+||    ..+++.....    ..|...+.     .+.|+|||+.++.  +..+|   |.+|++.+
T Consensus       269 ~~~~~--~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~  346 (719)
T 1z68_A          269 QWLKR--VQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTV  346 (719)
T ss_dssp             EEEES--STTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCS
T ss_pred             EEecc--ccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCC
Confidence            53322  22335788999    8888766655    46776676     8899999997644  44555   66777766


Q ss_pred             Cc
Q psy7108         282 GY  283 (703)
Q Consensus       282 ~~  283 (703)
                      ++
T Consensus       347 ~~  348 (719)
T 1z68_A          347 EN  348 (719)
T ss_dssp             TT
T ss_pred             Cc
Confidence            54

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.64  E-value=2.4e-14  Score=151.83  Aligned_cols=249  Identities=14%  Similarity=0.134  Sum_probs=159.5

Q ss_pred             CCcCeEEEEEcCCCCCCEEEEEeCC----CcEEEEEcCCC-ceeEE---EecCCCcEEEEEEecCCCEEEEEE-CCCeEE
Q psy7108          46 HEGPVSCIEFSPVLSSTGMVSASWD----KTVKLWNAVET-DTQHE---TIQLLSDALCVAYKPDGTEIVVAT-LDGQLI  116 (703)
Q Consensus        46 H~~~V~~l~~sp~~dg~~L~sgs~D----g~V~iWd~~~~-~~~~~---~~~~~~~V~~v~~spdg~~las~s-~dg~I~  116 (703)
                      |......++|+|  ++++|++++.+    +.|.+|++... .....   ...+......+++  +++.|++++ .++.|.
T Consensus        48 ~~~~p~~l~~sp--dg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~  123 (361)
T 3scy_A           48 EVANPSYLIPSA--DGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSIT  123 (361)
T ss_dssp             ECSCCCSEEECT--TSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEE
T ss_pred             cCCCCceEEECC--CCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEE
Confidence            777888999999  99999999876    79999998753 23222   2224556777887  888887776 578999


Q ss_pred             EEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe-cCCcEEEEECCCCce------E-
Q psy7108         117 MFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG-QSKYICIYSSREGIL------L-  188 (703)
Q Consensus       117 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s-~dg~I~lwD~~~~~~------~-  188 (703)
                      +|++.....+..+..........      ......+...+.+++|+|||+++++++ .++.|.+|++.....      + 
T Consensus       124 ~~~~~~~g~~~~~~~~~~~~g~~------~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~  197 (361)
T 3scy_A          124 VFPIGQDGALLPASDVIEFKGSG------PDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFL  197 (361)
T ss_dssp             EEEBCTTSCBCSCSEEEECCCCC------SCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCE
T ss_pred             EEEeCCCCcCcccceeEEccCCC------CCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCccccccee
Confidence            99997543322111000000000      000011223578899999999776655 478999999875431      1 


Q ss_pred             -----EEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcc--ceee---cCCccceEEEE
Q psy7108         189 -----KKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDM--AARV---LKPEVRVFCVK  258 (703)
Q Consensus       189 -----~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~--~~~~---~~h~~~V~~l~  258 (703)
                           .......       ......++|+|||++++++...+     ..|.+||+.+++.  ....   ..+...+.+++
T Consensus       198 ~~~~~~~~~~~~-------~~~~~~~~~spdg~~l~v~~~~~-----~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~  265 (361)
T 3scy_A          198 TKGTPEAFKVAP-------GSGPRHLIFNSDGKFAYLINEIG-----GTVIAFRYADGMLDEIQTVAADTVNAQGSGDIH  265 (361)
T ss_dssp             EEEEEEEEECCT-------TCCEEEEEECTTSSEEEEEETTT-----CEEEEEEEETTEEEEEEEEESCSSCCCCEEEEE
T ss_pred             ecccccceecCC-------CCCCeEEEEcCCCCEEEEEcCCC-----CeEEEEEecCCceEEeEEEecCCCCCCCcccEE
Confidence                 1111111       12457899999999887776432     3799999887643  2222   22334578999


Q ss_pred             EcCCCCEEEEEeCC--C-EEEEEcC--CCce--ecc-----eeeeEEEccchhhhHhhcCC-cceEEEEEEecC
Q psy7108         259 FSPTGQAWVAATTE--G-VHIYSLD--SGYV--FDP-----FLLDISITPQSVKEALADKD-YAKALMMSLKLN  319 (703)
Q Consensus       259 ~spdg~~l~s~s~D--g-v~iwd~~--~~~~--~~~-----~~~~~~~spd~~~~~l~sg~-~~~~l~la~~l~  319 (703)
                      |+|||++|+++..+  + |.+|+++  +++.  ...     ....++|+|++  ..+..++ .++.+.+ |.++
T Consensus       266 ~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg--~~l~~~~~~~~~v~v-~~~d  336 (361)
T 3scy_A          266 LSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNG--KYLLVACRDTNVIQI-FERD  336 (361)
T ss_dssp             ECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTS--CEEEEEETTTTEEEE-EEEC
T ss_pred             ECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCC--CEEEEEECCCCCEEE-EEEE
Confidence            99999999776655  5 9999986  4442  221     23568999999  5444433 4566665 5554

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.63  E-value=1.9e-14  Score=167.15  Aligned_cols=206  Identities=15%  Similarity=0.185  Sum_probs=147.5

Q ss_pred             eEEEEEcCCCCCCEEEEEe---------------------------------CCCcEEEEEcCCCceeEEEe--cCCCcE
Q psy7108          50 VSCIEFSPVLSSTGMVSAS---------------------------------WDKTVKLWNAVETDTQHETI--QLLSDA   94 (703)
Q Consensus        50 V~~l~~sp~~dg~~L~sgs---------------------------------~Dg~V~iWd~~~~~~~~~~~--~~~~~V   94 (703)
                      +.+++|+|  ||++|++++                                 .+..|++||+.+++......  .+...+
T Consensus       183 ~~~~~~Sp--Dg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~  260 (706)
T 2z3z_A          183 EKGTFWSP--KGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFL  260 (706)
T ss_dssp             CCSEEECT--TSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEE
T ss_pred             CceEEECC--CCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeE
Confidence            48999999  999999987                                 44679999998775332221  356779


Q ss_pred             EEEEEecCCCEEEEEECCC-----eEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC--CCCE
Q psy7108          95 LCVAYKPDGTEIVVATLDG-----QLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA--DGSC  167 (703)
Q Consensus        95 ~~v~~spdg~~las~s~dg-----~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp--dg~~  167 (703)
                      .+++|+|||+.|++++.++     .|++||+.+++....+......               .....+.+++|+|  ||++
T Consensus       261 ~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~---------------~~~~~~~~~~~sp~~dg~~  325 (706)
T 2z3z_A          261 TNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDK---------------HYVEPLHPLTFLPGSNNQF  325 (706)
T ss_dssp             EEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECS---------------SCCCCCSCCEECTTCSSEE
T ss_pred             eeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCC---------------CeECccCCceeecCCCCEE
Confidence            9999999999999988776     8999999998444333221110               0001235689999  9999


Q ss_pred             EEEEecCCcEEEEECC-CCceEEEEEeccCCcccccccccee-eeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccce
Q psy7108         168 ILAAGQSKYICIYSSR-EGILLKKFTITQNKSLDGINDFINR-RKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAA  245 (703)
Q Consensus       168 l~s~s~dg~I~lwD~~-~~~~~~~~~~~~~~~~~~~~~~v~~-~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~  245 (703)
                      +++++.|+.+++|++. ++..+..+..+        ...+.. ++|+|+|+.+++++..+ ......|..||..+++. .
T Consensus       326 l~~~~~~g~~~l~~~~~~~~~~~~l~~~--------~~~v~~~~~~spdg~~l~~~~~~~-~~~~~~l~~~d~~~~~~-~  395 (706)
T 2z3z_A          326 IWQSRRDGWNHLYLYDTTGRLIRQVTKG--------EWEVTNFAGFDPKGTRLYFESTEA-SPLERHFYCIDIKGGKT-K  395 (706)
T ss_dssp             EEEECTTSSCEEEEEETTSCEEEECCCS--------SSCEEEEEEECTTSSEEEEEESSS-CTTCBEEEEEETTCCCC-E
T ss_pred             EEEEccCCccEEEEEECCCCEEEecCCC--------CeEEEeeeEEcCCCCEEEEEecCC-CCceEEEEEEEcCCCCc-e
Confidence            9999999999999876 55555554322        224555 79999999888777553 11124778888877653 2


Q ss_pred             eecCCccceEEEEEcCCCCEEEEEeC-C---C-EEEEEcCCCc
Q psy7108         246 RVLKPEVRVFCVKFSPTGQAWVAATT-E---G-VHIYSLDSGY  283 (703)
Q Consensus       246 ~~~~h~~~V~~l~~spdg~~l~s~s~-D---g-v~iwd~~~~~  283 (703)
                      .+ .+...+.+++|||||++++.++. +   + +.+|++.+++
T Consensus       396 ~l-~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~  437 (706)
T 2z3z_A          396 DL-TPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS  437 (706)
T ss_dssp             ES-CCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred             ec-cCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence            23 36667999999999999876543 3   4 8999998876

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.62  E-value=5.1e-15  Score=173.02  Aligned_cols=210  Identities=10%  Similarity=0.043  Sum_probs=147.2

Q ss_pred             cCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCc-----EEEEEEecCCCEEEEEECC---------C
Q psy7108          48 GPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSD-----ALCVAYKPDGTEIVVATLD---------G  113 (703)
Q Consensus        48 ~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~-----V~~v~~spdg~~las~s~d---------g  113 (703)
                      ....+++|+|  |+.+++++  |++|++||+.++++...+..|...     ..+++|||||++|++++.+         +
T Consensus        17 ~~~~~~~w~~--dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~   92 (740)
T 4a5s_A           17 LKLYSLRWIS--DHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTA   92 (740)
T ss_dssp             CCCCCEEECS--SSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEE
T ss_pred             ccccccEECC--CCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccce
Confidence            3466899999  99988886  899999999988765444444422     2448899999999998876         5


Q ss_pred             eEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEE-E
Q psy7108         114 QLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKF-T  192 (703)
Q Consensus       114 ~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~-~  192 (703)
                      .+.+||+.+++... +..+                    .+.+...+|||||+.|+.+. ++.|++||+.+++..+.. .
T Consensus        93 ~~~~~d~~~~~~~~-l~~~--------------------~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~  150 (740)
T 4a5s_A           93 SYDIYDLNKRQLIT-EERI--------------------PNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWT  150 (740)
T ss_dssp             EEEEEETTTTEECC-SSCC--------------------CTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSC
T ss_pred             EEEEEECCCCcEEE-cccC--------------------CCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCC
Confidence            67799999987542 3222                    23689999999999999874 689999999988754321 1


Q ss_pred             eccCCcccccccc---------ceeeeeccCCCEEEEEcccCC------------------------------CCCeeEE
Q psy7108         193 ITQNKSLDGINDF---------INRRKMTEFGNVSLIETRETH------------------------------EGGNVVL  233 (703)
Q Consensus       193 ~~~~~~~~~~~~~---------v~~~~~spdg~~l~~~~~~~~------------------------------~~~~~~i  233 (703)
                      +.......++.++         ...+.|||||+.+++...++.                              ......+
T Consensus       151 g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l  230 (740)
T 4a5s_A          151 GKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKF  230 (740)
T ss_dssp             CBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEE
T ss_pred             CCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEE
Confidence            1212122232222         245899999999888753321                              1223478


Q ss_pred             ECCCCCC---Cc--cceeec------CCccceEEEEEcCCCCEEEEEeC----CC-EEEEEcCCCc
Q psy7108         234 KLPGVKK---GD--MAARVL------KPEVRVFCVKFSPTGQAWVAATT----EG-VHIYSLDSGY  283 (703)
Q Consensus       234 ~iwd~~~---~~--~~~~~~------~h~~~V~~l~~spdg~~l~s~s~----Dg-v~iwd~~~~~  283 (703)
                      ++||+.+   ++  ....+.      ++...+..++|||||+.++....    +. |.+||+.+++
T Consensus       231 ~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~  296 (740)
T 4a5s_A          231 FVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS  296 (740)
T ss_dssp             EEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred             EEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence            8999988   73  222333      37778999999999997655432    22 8899998887

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.62  E-value=2.6e-16  Score=184.00  Aligned_cols=241  Identities=8%  Similarity=0.064  Sum_probs=149.2

Q ss_pred             CCCcCeEEEEEcCCCCCCEEEEEeCC-----CcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCe-----
Q psy7108          45 GHEGPVSCIEFSPVLSSTGMVSASWD-----KTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQ-----  114 (703)
Q Consensus        45 gH~~~V~~l~~sp~~dg~~L~sgs~D-----g~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~-----  114 (703)
                      +|...+.+++|||  ||++|+.++.+     .+|++||+.+++...... +...+..++|+|| +.|+.++.++.     
T Consensus       160 ~~~~~~~~~~~SP--DG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~-~~~~~~~~~wspD-~~l~~~~~~~~~~~~~  235 (741)
T 1yr2_A          160 DGATALDAWAASD--DGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL-KWVKFSGLAWLGN-DALLYSRFAEPKEGQA  235 (741)
T ss_dssp             ---EEEEEEEECT--TSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE-EEEESCCCEESTT-SEEEEEECCCC-----
T ss_pred             CCCEEEEeEEECC--CCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC-CCceeccEEEECC-CEEEEEEecCcccccc
Confidence            4545789999999  99999987654     369999999886543322 1112357899999 99998887654     


Q ss_pred             ---------EEEEEcCCCcE--EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCC-----cEE
Q psy7108         115 ---------LIMFDVESAAQ--VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSK-----YIC  178 (703)
Q Consensus       115 ---------I~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg-----~I~  178 (703)
                               |++|++.+++.  ...+....                  +...+..+.|+|||++|+..+.++     .|+
T Consensus       236 ~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~------------------~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~  297 (741)
T 1yr2_A          236 FQALNYNQTVWLHRLGTPQSADQPVFATPE------------------LPKRGHGASVSSDGRWVVITSSEGTDPVNTVH  297 (741)
T ss_dssp             ---CCCCCEEEEEETTSCGGGCEEEECCTT------------------CTTCEEEEEECTTSCEEEEEEECTTCSCCEEE
T ss_pred             cccCCCCCEEEEEECCCCchhCEEEeccCC------------------CCeEEEEEEECCCCCEEEEEEEccCCCcceEE
Confidence                     88999877652  22222211                  112478899999999998876543     799


Q ss_pred             EEECCCC--ceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC--ccceeecCCccce
Q psy7108         179 IYSSREG--ILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG--DMAARVLKPEVRV  254 (703)
Q Consensus       179 lwD~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~--~~~~~~~~h~~~V  254 (703)
                      +||+.++  ++...+..+..        ..... ++|+|+.+++.+..+  .....|.+||+.++  +....+..+...+
T Consensus       298 ~~d~~~~~~~~~~~l~~~~~--------~~~~~-~~~dg~~l~~~s~~~--~~~~~l~~~d~~~~~~~~~~l~~~~~~~l  366 (741)
T 1yr2_A          298 VARVTNGKIGPVTALIPDLK--------AQWDF-VDGVGDQLWFVSGDG--APLKKIVRVDLSGSTPRFDTVVPESKDNL  366 (741)
T ss_dssp             EEEEETTEECCCEEEECSSS--------SCEEE-EEEETTEEEEEECTT--CTTCEEEEEECSSSSCEEEEEECCCSSEE
T ss_pred             EEECCCCCCcccEEecCCCC--------ceEEE-EeccCCEEEEEECCC--CCCCEEEEEeCCCCccccEEEecCCCCeE
Confidence            9999876  31344433221        22233 358999888876543  22357899998874  2333344455567


Q ss_pred             EEEEEcCCCCEEEEEeCCC-EEEEEcC-CCceecce-------eeeEEEccchhhhHhh--cCCcceEEEEEEecCc
Q psy7108         255 FCVKFSPTGQAWVAATTEG-VHIYSLD-SGYVFDPF-------LLDISITPQSVKEALA--DKDYAKALMMSLKLNE  320 (703)
Q Consensus       255 ~~l~~spdg~~l~s~s~Dg-v~iwd~~-~~~~~~~~-------~~~~~~spd~~~~~l~--sg~~~~~l~la~~l~~  320 (703)
                      .+++|+ ++..+++...|+ .+||.++ ++.....+       ...++++|++....+.  +......+.. +++..
T Consensus       367 ~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~-~d~~t  441 (741)
T 1yr2_A          367 ESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLA-LDPAT  441 (741)
T ss_dssp             EEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEE-EETTT
T ss_pred             EEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEE-EECCC
Confidence            778887 556678888888 5555443 23322211       2446777876221111  2333444544 66544

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.59  E-value=5e-14  Score=150.69  Aligned_cols=239  Identities=8%  Similarity=-0.017  Sum_probs=156.0

Q ss_pred             ceeecc-CCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEE--EecCCC
Q psy7108          28 VKKGDM-AARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVA--YKPDGT  104 (703)
Q Consensus        28 v~~~d~-tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~--~spdg~  104 (703)
                      +..+|. +|+..  ....+|...+.+++|+|  ||+.|++++.++.+++||+.+++.......+...+....  ++|+++
T Consensus        62 l~~~d~~~g~~~--~lt~~~~~~~~~~~~sp--dg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~  137 (388)
T 3pe7_A           62 YYLLDLNTQVAT--QLTEGRGDNTFGGFLSP--DDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCT  137 (388)
T ss_dssp             EEEEETTTCEEE--ECCCSSCBCSSSCEECT--TSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSS
T ss_pred             EEEEeCCCCceE--EeeeCCCCCccceEEcC--CCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCC
Confidence            344563 45554  55566666666789999  999999999999999999998865444444444454444  489999


Q ss_pred             EEEEEE----------------------CCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEc
Q psy7108         105 EIVVAT----------------------LDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYS  162 (703)
Q Consensus       105 ~las~s----------------------~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~s  162 (703)
                      .++...                      .+..|++||+.+++....... ..                    .+..++|+
T Consensus       138 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~-~~--------------------~~~~~~~s  196 (388)
T 3pe7_A          138 KLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQE-NQ--------------------WLGHPIYR  196 (388)
T ss_dssp             EEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEE-SS--------------------CEEEEEEE
T ss_pred             eeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecC-Cc--------------------cccccEEC
Confidence            887532                      346799999999876554433 22                    58899999


Q ss_pred             C-CCCEEEEEecC------CcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEEC
Q psy7108         163 A-DGSCILAAGQS------KYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKL  235 (703)
Q Consensus       163 p-dg~~l~s~s~d------g~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~i  235 (703)
                      | ||+.|+.++.+      ..|.++|...+.... +....      ....+..++|+|||+.+++.+... ......|.+
T Consensus       197 p~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~------~~~~~~~~~~spdg~~l~~~~~~~-~~~~~~l~~  268 (388)
T 3pe7_A          197 PYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRK-VKTHA------EGESCTHEFWVPDGSALVYVSYLK-GSPDRFIYS  268 (388)
T ss_dssp             TTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEE-SCCCC------TTEEEEEEEECTTSSCEEEEEEET-TCCCEEEEE
T ss_pred             CCCCCEEEEEEecCCCCCcceEEEEeCCCCceEE-eeeCC------CCcccccceECCCCCEEEEEecCC-CCCcceEEE
Confidence            9 99999877653      378888887654322 21111      012466789999999886655432 111235999


Q ss_pred             CCCCCCcccee--ecCCcc---ceEEEEEcCCCCEEEEE---------eCCC-EEEEEcCCCceecc-------------
Q psy7108         236 PGVKKGDMAAR--VLKPEV---RVFCVKFSPTGQAWVAA---------TTEG-VHIYSLDSGYVFDP-------------  287 (703)
Q Consensus       236 wd~~~~~~~~~--~~~h~~---~V~~l~~spdg~~l~s~---------s~Dg-v~iwd~~~~~~~~~-------------  287 (703)
                      ||+.+++....  ..++..   ....++|+|||+.|+..         ..+. |.+|++.+++....             
T Consensus       269 ~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~  348 (388)
T 3pe7_A          269 ADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARHDTSWKVFEGD  348 (388)
T ss_dssp             ECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEEEEEECCCCCCCBTTB
T ss_pred             EecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEEeccccCcccccccc
Confidence            99998874322  222110   01223799999988754         3344 99999988765221             


Q ss_pred             ---eeeeEEEccchh
Q psy7108         288 ---FLLDISITPQSV  299 (703)
Q Consensus       288 ---~~~~~~~spd~~  299 (703)
                         .....+|+||+.
T Consensus       349 ~~~~~~~~~~spDg~  363 (388)
T 3pe7_A          349 RQVTHPHPSFTPDDK  363 (388)
T ss_dssp             SSTTCCCCEECTTSS
T ss_pred             cccCCCCccCCCCCC
Confidence               134568999983

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.59  E-value=4.4e-14  Score=150.45  Aligned_cols=243  Identities=11%  Similarity=0.061  Sum_probs=158.2

Q ss_pred             CCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcC-CCceeEEEecC--CCcEEEEEEecCCCE--EEEEE----------
Q psy7108          46 HEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAV-ETDTQHETIQL--LSDALCVAYKPDGTE--IVVAT----------  110 (703)
Q Consensus        46 H~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~-~~~~~~~~~~~--~~~V~~v~~spdg~~--las~s----------  110 (703)
                      +...+..++|+|  ++++|++++.+ .|.+|++. +++. .....+  .+.+.+++|+|||+.  ++++.          
T Consensus        38 ~~~~~~~~a~sp--dg~~l~~~~~~-~v~~~~~~~~g~~-~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~  113 (365)
T 1jof_A           38 QDEPISWMTFDH--ERKNIYGAAMK-KWSSFAVKSPTEI-VHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANP  113 (365)
T ss_dssp             TTCCCSEEEECT--TSSEEEEEEBT-EEEEEEEEETTEE-EEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEE
T ss_pred             CCCCCcEEEECC--CCCEEEEEccc-eEEEEEECCCCCE-EEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccce
Confidence            445788999999  99999999888 99999997 5543 222222  133556899999994  44543          


Q ss_pred             ---CCCeEEEEEcC-CCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec-CCcEEEEECC-C
Q psy7108         111 ---LDGQLIMFDVE-SAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ-SKYICIYSSR-E  184 (703)
Q Consensus       111 ---~dg~I~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~-dg~I~lwD~~-~  184 (703)
                         .++.+.+|+++ +++....+.....                .+...+.+++|+|||+++++++. ++.|++||+. +
T Consensus       114 ~~~~~g~v~v~~~~~~g~~~~~~~~~~~----------------~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~  177 (365)
T 1jof_A          114 FYKFAGYGNVFSVSETGKLEKNVQNYEY----------------QENTGIHGMVFDPTETYLYSADLTANKLWTHRKLAS  177 (365)
T ss_dssp             ESSSCCEEEEEEECTTCCEEEEEEEEEC----------------CTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred             eecCCceEEEEccCCCCcCcceEeeEEe----------------CCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCC
Confidence               68999999997 4655444332100                01236899999999998887754 6789999998 6


Q ss_pred             CceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCC--CCCccce------eecC----Ccc
Q psy7108         185 GILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGV--KKGDMAA------RVLK----PEV  252 (703)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~--~~~~~~~------~~~~----h~~  252 (703)
                      ++.........    ..+...+..++|+|||+.++++...+     ..+.+|+.  .+++...      .+..    +..
T Consensus       178 g~~~~~~~~~~----~~~g~~p~~~~~spdg~~l~v~~~~~-----~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~  248 (365)
T 1jof_A          178 GEVELVGSVDA----PDPGDHPRWVAMHPTGNYLYALMEAG-----NRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDP  248 (365)
T ss_dssp             SCEEEEEEEEC----SSTTCCEEEEEECTTSSEEEEEETTT-----TEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCT
T ss_pred             CCEEEeeeEec----CCCCCCCCEeEECCCCCEEEEEECCC-----CeEEEEEEeCCCCcEEEccceEEcCCCCcCCccc
Confidence            76532211110    00123577899999999888766432     36777754  3555321      1111    122


Q ss_pred             ------ceEEEE-EcCCCCEEEEEe--CC-----CEEEEEcC-CCceec---ce------eeeEEEcc---chhhhHhhc
Q psy7108         253 ------RVFCVK-FSPTGQAWVAAT--TE-----GVHIYSLD-SGYVFD---PF------LLDISITP---QSVKEALAD  305 (703)
Q Consensus       253 ------~V~~l~-~spdg~~l~s~s--~D-----gv~iwd~~-~~~~~~---~~------~~~~~~sp---d~~~~~l~s  305 (703)
                            .+.+++ |+|||++|++++  .+     .|.+|+++ +++...   ..      ...++|+|   ++  ..++.
T Consensus       249 ~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg--~~l~v  326 (365)
T 1jof_A          249 ETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSD--EWMAI  326 (365)
T ss_dssp             TTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCT--TEEEE
T ss_pred             ccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCC--CEEEE
Confidence                  588999 999999987654  34     49999986 555432   11      24578889   78  55555


Q ss_pred             CCc-ceEEEEEEecCc
Q psy7108         306 KDY-AKALMMSLKLNE  320 (703)
Q Consensus       306 g~~-~~~l~la~~l~~  320 (703)
                      .+. ++.+.+ |+++.
T Consensus       327 ~~~~~~~v~v-~~~~~  341 (365)
T 1jof_A          327 TDDQEGWLEI-YRWKD  341 (365)
T ss_dssp             ECSSSCEEEE-EEEET
T ss_pred             EEcCCCeEEE-EEEch
Confidence            544 467776 66543

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.57  E-value=7.6e-14  Score=148.58  Aligned_cols=231  Identities=13%  Similarity=0.129  Sum_probs=150.8

Q ss_pred             ceeecc--CCCcccccccc--CCCcCeEEEEEcCCCCCCE--EEEEe-------------CCCcEEEEEcCC-CceeEEE
Q psy7108          28 VKKGDM--AARVLKPEVLS--GHEGPVSCIEFSPVLSSTG--MVSAS-------------WDKTVKLWNAVE-TDTQHET   87 (703)
Q Consensus        28 v~~~d~--tg~~~~~~~l~--gH~~~V~~l~~sp~~dg~~--L~sgs-------------~Dg~V~iWd~~~-~~~~~~~   87 (703)
                      +..|+.  +|++.  ....  .+ +...+++|+|  +|++  +++++             .+|++++|++.. ++.....
T Consensus        62 v~~~~~~~~g~~~--~~~~~~~~-g~~~~~~~sp--dg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~  136 (365)
T 1jof_A           62 WSSFAVKSPTEIV--HEASHPIG-GHPRANDADT--NTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNV  136 (365)
T ss_dssp             EEEEEEEETTEEE--EEEEEECC-SSGGGGCTTS--CCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEE
T ss_pred             EEEEEECCCCCEE--EeeEeecC-CCCccEEECC--CCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceE
Confidence            555653  56654  3322  11 2356689999  9984  55553             689999999974 4332222


Q ss_pred             e----cCCCcEEEEEEecCCCEEEEEEC-CCeEEEEEcC-CCcEEE--EEeccccCCCCCCCCccchhhcccCCccEEEE
Q psy7108          88 I----QLLSDALCVAYKPDGTEIVVATL-DGQLIMFDVE-SAAQVG--SVEARRDLDSGRLDTDLVTREQSLKAKAVSTV  159 (703)
Q Consensus        88 ~----~~~~~V~~v~~spdg~~las~s~-dg~I~vwd~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i  159 (703)
                      .    .+...+.+++|+|||++++++.. ++.|++||++ +++...  .+....                  ++..+..+
T Consensus       137 ~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~------------------~g~~p~~~  198 (365)
T 1jof_A          137 QNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPD------------------PGDHPRWV  198 (365)
T ss_dssp             EEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSS------------------TTCCEEEE
T ss_pred             eeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCC------------------CCCCCCEe
Confidence            2    24567999999999998887764 6799999998 676432  222100                  12368899


Q ss_pred             EEcCCCCEEEEEec-CCcEEEEECC--CCceEE---EEEeccCCccccccc------cceeee-eccCCCEEEEEcccCC
Q psy7108         160 CYSADGSCILAAGQ-SKYICIYSSR--EGILLK---KFTITQNKSLDGIND------FINRRK-MTEFGNVSLIETRETH  226 (703)
Q Consensus       160 ~~spdg~~l~s~s~-dg~I~lwD~~--~~~~~~---~~~~~~~~~~~~~~~------~v~~~~-~spdg~~l~~~~~~~~  226 (703)
                      +|+|||+++++++. ++.|.+|++.  +++...   .+..... ...++..      .+..++ |+|||++++++.....
T Consensus       199 ~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~  277 (365)
T 1jof_A          199 AMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPP-GIPDRDPETGKGLYRADVCALTFSGKYMFASSRANK  277 (365)
T ss_dssp             EECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCT-TCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESS
T ss_pred             EECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCC-CcCCcccccccccccccEEEECCCCCEEEEECCCCC
Confidence            99999999988764 6889999865  465432   2221110 0112222      467899 9999998887664321


Q ss_pred             CCCeeEEECCCCC-CCccce---eecCCccceEEEEEcC---CCCEEEEEeCC-C-EEEEEcCCC
Q psy7108         227 EGGNVVLKLPGVK-KGDMAA---RVLKPEVRVFCVKFSP---TGQAWVAATTE-G-VHIYSLDSG  282 (703)
Q Consensus       227 ~~~~~~i~iwd~~-~~~~~~---~~~~h~~~V~~l~~sp---dg~~l~s~s~D-g-v~iwd~~~~  282 (703)
                      ......|.+|++. +++...   ....+...+..++|+|   ||++|++++.+ + |.+|+++..
T Consensus       278 ~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~  342 (365)
T 1jof_A          278 FELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE  342 (365)
T ss_dssp             TTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred             CCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence            1111279999886 565432   1333445567899999   89999998875 5 999998765

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.56  E-value=7.4e-13  Score=140.35  Aligned_cols=211  Identities=13%  Similarity=0.222  Sum_probs=137.6

Q ss_pred             ccCCCcCeEEEEEcCCCCCCEEEEEe-CCCcEEEEEcCCCceeE---EEecC-----------CCcEEEEEEecCCCEEE
Q psy7108          43 LSGHEGPVSCIEFSPVLSSTGMVSAS-WDKTVKLWNAVETDTQH---ETIQL-----------LSDALCVAYKPDGTEIV  107 (703)
Q Consensus        43 l~gH~~~V~~l~~sp~~dg~~L~sgs-~Dg~V~iWd~~~~~~~~---~~~~~-----------~~~V~~v~~spdg~~la  107 (703)
                      ...+......+++    ++++|++++ .++.|.+|++.......   ....+           ...+.+++|+|||++++
T Consensus        95 ~~~~~~~p~~~~~----dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~  170 (361)
T 3scy_A           95 QKTMGADPCYLTT----NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLL  170 (361)
T ss_dssp             EECSSSCEEEEEE----CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEE
T ss_pred             eccCCCCcEEEEE----CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEE
Confidence            3345556667776    356666655 68899999997543321   11111           23468899999999776


Q ss_pred             EEEC-CCeEEEEEcCCCcE------E------EEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe-c
Q psy7108         108 VATL-DGQLIMFDVESAAQ------V------GSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG-Q  173 (703)
Q Consensus       108 s~s~-dg~I~vwd~~~~~~------~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s-~  173 (703)
                      +++. ++.|.+|+++....      +      ......                   .......++|+|||+++++++ .
T Consensus       171 ~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~-------------------~~~~~~~~~~spdg~~l~v~~~~  231 (361)
T 3scy_A          171 ADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVA-------------------PGSGPRHLIFNSDGKFAYLINEI  231 (361)
T ss_dssp             EEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECC-------------------TTCCEEEEEECTTSSEEEEEETT
T ss_pred             EEeCCCCEEEEEEEcCCCCcccccceeecccccceecC-------------------CCCCCeEEEEcCCCCEEEEEcCC
Confidence            6654 78999999875431      1      111111                   122578899999999888777 6


Q ss_pred             CCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC--CCc--cceeecC
Q psy7108         174 SKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK--KGD--MAARVLK  249 (703)
Q Consensus       174 dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~--~~~--~~~~~~~  249 (703)
                      ++.|.+||+.+++..........   .........++|+|||++++++...+    ...+.+|++.  +++  .+.....
T Consensus       232 ~~~v~v~~~~~g~~~~~~~~~~~---~~~~~~~~~i~~spdg~~l~v~~~~~----~~~i~v~~~~~~~g~~~~~~~~~~  304 (361)
T 3scy_A          232 GGTVIAFRYADGMLDEIQTVAAD---TVNAQGSGDIHLSPDGKYLYASNRLK----ADGVAIFKVDETNGTLTKVGYQLT  304 (361)
T ss_dssp             TCEEEEEEEETTEEEEEEEEESC---SSCCCCEEEEEECTTSSEEEEEECSS----SCEEEEEEECTTTCCEEEEEEEEC
T ss_pred             CCeEEEEEecCCceEEeEEEecC---CCCCCCcccEEECCCCCEEEEECCCC----CCEEEEEEEcCCCCcEEEeeEecC
Confidence            88999999987754322221111   11122457899999999987766541    1379999875  444  3333333


Q ss_pred             CccceEEEEEcCCCCEEEEEeC-CC-EEEEEcC--CCce
Q psy7108         250 PEVRVFCVKFSPTGQAWVAATT-EG-VHIYSLD--SGYV  284 (703)
Q Consensus       250 h~~~V~~l~~spdg~~l~s~s~-Dg-v~iwd~~--~~~~  284 (703)
                       ...+.+++|+|||++|++++. ++ +.+|+++  +++.
T Consensus       305 -g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~  342 (361)
T 3scy_A          305 -GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLL  342 (361)
T ss_dssp             -SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCE
T ss_pred             -CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcE
Confidence             456789999999999988874 45 8886554  5554

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.56  E-value=5.3e-13  Score=141.85  Aligned_cols=238  Identities=12%  Similarity=0.138  Sum_probs=155.7

Q ss_pred             eec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEe----------CCCcEEEEEcCCCceeEEEecC------CC
Q psy7108          30 KGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSAS----------WDKTVKLWNAVETDTQHETIQL------LS   92 (703)
Q Consensus        30 ~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs----------~Dg~V~iWd~~~~~~~~~~~~~------~~   92 (703)
                      .|| .+++++  ..+..+..+  .++|+|  |++++++++          .+++|.+||..+.+....+...      ..
T Consensus        35 v~D~~t~~~~--~~i~~g~~p--~i~~sp--dg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~  108 (361)
T 2oiz_A           35 VYDYTNGKFL--GMVPTAFNG--HVQVSN--DGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLN  108 (361)
T ss_dssp             EEETTTCCEE--EEEECCEEE--EEEECT--TSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCC
T ss_pred             EEECCCCeEE--EEecCCCCC--ceEECC--CCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCC
Confidence            344 477877  777777666  899999  999999886          3678999999887665554422      24


Q ss_pred             cEEEEEEecCCCEEEEEEC--CCeEEEEEcCCCcEEEE-EeccccCCCCCCCCccchhhcccCCccEEEEEEcCCC-CEE
Q psy7108          93 DALCVAYKPDGTEIVVATL--DGQLIMFDVESAAQVGS-VEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADG-SCI  168 (703)
Q Consensus        93 ~V~~v~~spdg~~las~s~--dg~I~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg-~~l  168 (703)
                      ....++++|||++|+++..  +++|.+||+.+++.+.. +....                      ...+.+.|++ ..+
T Consensus       109 ~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~----------------------~~~v~~~p~~~~~~  166 (361)
T 2oiz_A          109 YDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAG----------------------CWSVIPQPNRPRSF  166 (361)
T ss_dssp             CGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTT----------------------EEEEEECTTSSSEE
T ss_pred             CcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCC----------------------cceeEEcCCCCeeE
Confidence            5677999999999998874  57899999999988776 44321                      1112333332 333


Q ss_pred             EEEecCCcEEEEECCC-CceE-------------------------------------------------EEEEeccCCc
Q psy7108         169 LAAGQSKYICIYSSRE-GILL-------------------------------------------------KKFTITQNKS  198 (703)
Q Consensus       169 ~s~s~dg~I~lwD~~~-~~~~-------------------------------------------------~~~~~~~~~~  198 (703)
                      ++.+.||.+.+|+... ++..                                                 ..+.......
T Consensus       167 ~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~  246 (361)
T 2oiz_A          167 MTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDED  246 (361)
T ss_dssp             EEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHH
T ss_pred             EEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccc
Confidence            3344444444444332 2211                                                 1111000000


Q ss_pred             c-cc-ccccceeeeeccCCCEEEEEcc-cCC----CCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeC
Q psy7108         199 L-DG-INDFINRRKMTEFGNVSLIETR-ETH----EGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATT  271 (703)
Q Consensus       199 ~-~~-~~~~v~~~~~spdg~~l~~~~~-~~~----~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~  271 (703)
                      . .+ .......++++|+++.+++... ++.    .+....|.+||..+++.+..+..+.  +.+++|+|||++|++++.
T Consensus       247 ~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~  324 (361)
T 2oiz_A          247 KAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG  324 (361)
T ss_dssp             HHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS
T ss_pred             cccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC
Confidence            0 00 0001123689999888877654 111    1112489999999999988888776  999999999999988887


Q ss_pred             CC-EEEEEcCCC--ceecce------eeeEEEccch
Q psy7108         272 EG-VHIYSLDSG--YVFDPF------LLDISITPQS  298 (703)
Q Consensus       272 Dg-v~iwd~~~~--~~~~~~------~~~~~~spd~  298 (703)
                       + |.+||..++  +.+..+      ...+.++|+|
T Consensus       325 -~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G  359 (361)
T 2oiz_A          325 -GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVG  359 (361)
T ss_dssp             -SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCS
T ss_pred             -CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCC
Confidence             6 999999999  776553      2568888887

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=99.54  E-value=1.5e-15  Score=176.04  Aligned_cols=206  Identities=8%  Similarity=0.040  Sum_probs=134.9

Q ss_pred             cCCCcCeEEEEEcCCCCCCEEEEE-----eCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCC-----
Q psy7108          44 SGHEGPVSCIEFSPVLSSTGMVSA-----SWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDG-----  113 (703)
Q Consensus        44 ~gH~~~V~~l~~sp~~dg~~L~sg-----s~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg-----  113 (703)
                      .+|...+.+++|||  ||++||.+     +.+.+|++||+.+++....... ......++|+ ||+.|+.++.+.     
T Consensus       125 ~~~~~~l~~~~~Sp--Dg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~-~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~  200 (693)
T 3iuj_A          125 PDGTTALDQLSFSR--DGRILAYSLSLAGSDWREIHLMDVESKQPLETPLK-DVKFSGISWL-GNEGFFYSSYDKPDGSE  200 (693)
T ss_dssp             TTSCCEEEEEEECT--TSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEE-EEESCCCEEE-TTTEEEEEESSCCC---
T ss_pred             CCCcEEEEEEEECC--CCCEEEEEEecCCCceEEEEEEECCCCCCCccccC-CceeccEEEe-CCCEEEEEEecCccccc
Confidence            35667899999999  99998854     2335799999999875433221 1112568899 999999998874     


Q ss_pred             --------eEEEEEcCCCcE--EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec----CCcEEE
Q psy7108         114 --------QLIMFDVESAAQ--VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ----SKYICI  179 (703)
Q Consensus       114 --------~I~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~----dg~I~l  179 (703)
                              .|++|++.++..  ...+.....                 +...+..+.|+|||++|+....    ++.|++
T Consensus       201 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~-----------------~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~  263 (693)
T 3iuj_A          201 LSARTDQHKVYFHRLGTAQEDDRLVFGAIPA-----------------QHHRYVGATVTEDDRFLLISAANSTSGNRLYV  263 (693)
T ss_dssp             ----CCCCEEEEEETTSCGGGCEEEESCSGG-----------------GCCSEEEEEECTTSCEEEEEEESSSSCCEEEE
T ss_pred             ccccCCCcEEEEEECCCCcccceEEEecCCC-----------------CCeEEEEEEEcCCCCEEEEEEccCCCCcEEEE
Confidence                    399999987643  223322110                 1124678999999999875432    247999


Q ss_pred             EECCCCc-eEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcc--ceeecCCccceEE
Q psy7108         180 YSSREGI-LLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDM--AARVLKPEVRVFC  256 (703)
Q Consensus       180 wD~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~--~~~~~~h~~~V~~  256 (703)
                      +|+.++. ....+..+..        ..... ++++|..+++.+..+  .....|..+|+.++..  ...+..|...+. 
T Consensus       264 ~d~~~~~~~~~~l~~~~~--------~~~~~-~~~~g~~l~~~t~~~--~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~-  331 (693)
T 3iuj_A          264 KDLSQENAPLLTVQGDLD--------ADVSL-VDNKGSTLYLLTNRD--APNRRLVTVDAANPGPAHWRDLIPERQQVL-  331 (693)
T ss_dssp             EETTSTTCCCEEEECSSS--------SCEEE-EEEETTEEEEEECTT--CTTCEEEEEETTSCCGGGCEEEECCCSSCE-
T ss_pred             EECCCCCCceEEEeCCCC--------ceEEE-EeccCCEEEEEECCC--CCCCEEEEEeCCCCCccccEEEecCCCCEE-
Confidence            9998763 3344443222        22233 677887777666543  2234788889887654  244555655554 


Q ss_pred             EEEcCCCCEEEEEe-CCC---EEEEEcCCCc
Q psy7108         257 VKFSPTGQAWVAAT-TEG---VHIYSLDSGY  283 (703)
Q Consensus       257 l~~spdg~~l~s~s-~Dg---v~iwd~~~~~  283 (703)
                       .|+++++.|+... .++   |++|+++++.
T Consensus       332 -~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~  361 (693)
T 3iuj_A          332 -TVHSGSGYLFAEYMVDATARVEQFDYEGKR  361 (693)
T ss_dssp             -EEEEETTEEEEEEEETTEEEEEEECTTSCE
T ss_pred             -EEEEECCEEEEEEEECCeeEEEEEECCCCe
Confidence             8999999886555 454   7888887554

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.53  E-value=9e-13  Score=138.14  Aligned_cols=250  Identities=12%  Similarity=0.174  Sum_probs=171.0

Q ss_pred             CcCeEEEEEcCCCCCCEEEEEeCC------------------------CcEEEEEcCCCceeEEEe-cCCCcEEEEEEec
Q psy7108          47 EGPVSCIEFSPVLSSTGMVSASWD------------------------KTVKLWNAVETDTQHETI-QLLSDALCVAYKP  101 (703)
Q Consensus        47 ~~~V~~l~~sp~~dg~~L~sgs~D------------------------g~V~iWd~~~~~~~~~~~-~~~~~V~~v~~sp  101 (703)
                      -+.+.+++++|  +|+++++.+.+                        ++|.+||..+++...... .+-..+..++++|
T Consensus        23 l~~v~~va~d~--~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~  100 (329)
T 3fvz_A           23 PGQVSGVALDS--KNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDT  100 (329)
T ss_dssp             CSCEEEEEECT--TCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECT
T ss_pred             cCCceEEEECC--CCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECC
Confidence            46799999999  99999988877                        479999988776543332 2345789999999


Q ss_pred             CCCEEEEEECCCeEEEEEcCCCc-EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC-CCCEEEEEe-cCCcEE
Q psy7108         102 DGTEIVVATLDGQLIMFDVESAA-QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA-DGSCILAAG-QSKYIC  178 (703)
Q Consensus       102 dg~~las~s~dg~I~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp-dg~~l~s~s-~dg~I~  178 (703)
                      +|+.+++...++.|++||.+... .+..+.....  .+         ....+......++++| ++..+++.+ .++.|+
T Consensus       101 ~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~--~g---------~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~  169 (329)
T 3fvz_A          101 DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQ--PG---------SDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIV  169 (329)
T ss_dssp             TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTB--CC---------CSTTCCSSEEEEEECTTTCCEEEEECSSCCEEE
T ss_pred             CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCC--CC---------CCccccCCCcEEEEeCCCCeEEEEeCCCCCeEE
Confidence            99988888888999999986542 3444422100  00         0011223678999999 788888776 689999


Q ss_pred             EEECCCCceEEEEEeccCC--ccccccccceeeeeccC-CCEEEEEcccCCCCCeeEEECCCCCCCccceeec--CCccc
Q psy7108         179 IYSSREGILLKKFTITQNK--SLDGINDFINRRKMTEF-GNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL--KPEVR  253 (703)
Q Consensus       179 lwD~~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~spd-g~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~--~h~~~  253 (703)
                      +|| .+++.+..+......  ...+.......++++|+ +..+++....      ..|++||..+++.+..+.  .+...
T Consensus       170 ~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~------~~I~~~~~~~G~~~~~~~~~~~~~~  242 (329)
T 3fvz_A          170 QFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADREN------GRIQCFKTDTKEFVREIKHASFGRN  242 (329)
T ss_dssp             EEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTT------TEEEEEETTTCCEEEEECCTTTTTC
T ss_pred             EEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCC------CEEEEEECCCCcEEEEEeccccCCC
Confidence            999 567777666432211  01122235788999999 5555544433      389999998888777664  35567


Q ss_pred             eEEEEEcC------CCCEEEEEeCCC-EEEEEcCCCceecce---------eeeEEEccchhhhHhhcCCcceEEEEEEe
Q psy7108         254 VFCVKFSP------TGQAWVAATTEG-VHIYSLDSGYVFDPF---------LLDISITPQSVKEALADKDYAKALMMSLK  317 (703)
Q Consensus       254 V~~l~~sp------dg~~l~s~s~Dg-v~iwd~~~~~~~~~~---------~~~~~~spd~~~~~l~sg~~~~~l~la~~  317 (703)
                      +.+++|+|      +|+..++...+. +++|+..+++....+         ...++++|++  .++.+...+..|.. |+
T Consensus       243 ~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG--~lyvad~~~~~I~~-~~  319 (329)
T 3fvz_A          243 VFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDG--TVYIGDAHTNTVWK-FT  319 (329)
T ss_dssp             EEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTS--EEEEEESSSCCEEE-EE
T ss_pred             cceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCC--CEEEEECCCCEEEE-Ee
Confidence            88999999      333222233344 899999888876554         3578999999  56666666667666 65


Q ss_pred             cC
Q psy7108         318 LN  319 (703)
Q Consensus       318 l~  319 (703)
                      +.
T Consensus       320 ~~  321 (329)
T 3fvz_A          320 LT  321 (329)
T ss_dssp             EE
T ss_pred             CC
Confidence            54

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.52  E-value=5.6e-14  Score=150.38  Aligned_cols=249  Identities=8%  Similarity=-0.059  Sum_probs=156.3

Q ss_pred             cCCCccccccccCCCcC-----eEEEEEcCCCCCCEEEEEeCC---CcEEEEEcCCCceeEEEecCCCcEE-EEEEecCC
Q psy7108          33 MAARVLKPEVLSGHEGP-----VSCIEFSPVLSSTGMVSASWD---KTVKLWNAVETDTQHETIQLLSDAL-CVAYKPDG  103 (703)
Q Consensus        33 ~tg~~~~~~~l~gH~~~-----V~~l~~sp~~dg~~L~sgs~D---g~V~iWd~~~~~~~~~~~~~~~~V~-~v~~spdg  103 (703)
                      .+|+.+  +.+..+...     +.+++|+|  ||++|+.++.+   ..|.+||+.+++ ...+..+...+. .+.|+|||
T Consensus        18 ~~g~~~--~~l~~~~~~~~~~~~~~~~~Sp--dG~~l~~~~~~~g~~~l~~~d~~~~~-~~~l~~~~~~~~~~~~~spdg   92 (396)
T 3c5m_A           18 DTQVKV--TRLTPTDIICHRNYFYQKCFTQ--DGKKLLFAGDFDGNRNYYLLNLETQQ-AVQLTEGKGDNTFGGFISTDE   92 (396)
T ss_dssp             TTCCEE--EECSCTTSCEECCCTTSCCBCT--TSCEEEEEECTTSSCEEEEEETTTTE-EEECCCSSCBCTTTCEECTTS
T ss_pred             CCCcce--EEEecCCCCccceeeecCcCCC--CCCEEEEEEecCCCceEEEEECCCCc-EEEeecCCCCccccceECCCC
Confidence            466666  667665444     78889999  99998877543   367888987764 344444444433 37899999


Q ss_pred             CEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccC--CccEEEEEEcCCCCEEEEE-----ecCCc
Q psy7108         104 TEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLK--AKAVSTVCYSADGSCILAA-----GQSKY  176 (703)
Q Consensus       104 ~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~V~~i~~spdg~~l~s~-----s~dg~  176 (703)
                      +.|++++.++.|++||+.+++.......+......   ...........  ......++|+|+++.++.+     ..+..
T Consensus        93 ~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~---g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~  169 (396)
T 3c5m_A           93 RAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGY---GTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCR  169 (396)
T ss_dssp             SEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEE---EEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEE
T ss_pred             CEEEEEEcCCcEEEEECCCCCcEEEEecccccCCC---CCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcce
Confidence            99999999999999999998876655543220000   00000000000  0000014578888877654     35668


Q ss_pred             EEEEECCCCceEEEEEeccCCccccccccceeeeecc-CCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCC-ccce
Q psy7108         177 ICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTE-FGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKP-EVRV  254 (703)
Q Consensus       177 I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-dg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h-~~~V  254 (703)
                      |.+||+.+++...... .        ...+..+.|+| +++.+++.+..+.......|.+||+..++........ ...+
T Consensus       170 l~~~d~~~g~~~~~~~-~--------~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~  240 (396)
T 3c5m_A          170 LIKVDIETGELEVIHQ-D--------TAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESC  240 (396)
T ss_dssp             EEEEETTTCCEEEEEE-E--------SSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEE
T ss_pred             EEEEECCCCcEEeecc-C--------CcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccc
Confidence            9999999887655442 1        22577899999 7887776654321111135777887665533332221 3468


Q ss_pred             EEEEEcCCCCEEEEEeCC-----C-EEEEEcCCCceecce---eeeEEEcc-ch
Q psy7108         255 FCVKFSPTGQAWVAATTE-----G-VHIYSLDSGYVFDPF---LLDISITP-QS  298 (703)
Q Consensus       255 ~~l~~spdg~~l~s~s~D-----g-v~iwd~~~~~~~~~~---~~~~~~sp-d~  298 (703)
                      ..++|+|||+.|+.++.+     + |.+||+.+++.....   .....|+| ++
T Consensus       241 ~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~s~~dg  294 (396)
T 3c5m_A          241 THEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPPCSHLMSNFDG  294 (396)
T ss_dssp             EEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCSEEEEEECSSS
T ss_pred             cceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCCCCCCccCCCC
Confidence            889999999988776543     4 899999887643211   12278888 88

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.48  E-value=1.1e-12  Score=151.03  Aligned_cols=214  Identities=13%  Similarity=0.042  Sum_probs=142.3

Q ss_pred             ccccC-----CCcCeEEEEEcCCCCCCEEEEEeCC----------CcEEEEEcCCC-----ceeEEEe-cCCCcEEEEEE
Q psy7108          41 EVLSG-----HEGPVSCIEFSPVLSSTGMVSASWD----------KTVKLWNAVET-----DTQHETI-QLLSDALCVAY   99 (703)
Q Consensus        41 ~~l~g-----H~~~V~~l~~sp~~dg~~L~sgs~D----------g~V~iWd~~~~-----~~~~~~~-~~~~~V~~v~~   99 (703)
                      +.+..     |...+.+++|+|  ||+.|++++.|          .+|++||+.+.     .....+. .+...+..++|
T Consensus       118 ~~l~~~~~~~~~~~~~~~~~sp--Dg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  195 (662)
T 3azo_A          118 RPLTPVSAVGGGLRWADPVLLP--ERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRL  195 (662)
T ss_dssp             EECSCCCCSTTCEEEEEEEEET--TTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEE
T ss_pred             EeccCCccCCCCccccCcEECC--CCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceE
Confidence            56666     778899999999  99999999877          58999999872     3445555 55677888999


Q ss_pred             ecCCCEEEEEECCC--------eEEEEEcC-CC---cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCE
Q psy7108         100 KPDGTEIVVATLDG--------QLIMFDVE-SA---AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSC  167 (703)
Q Consensus       100 spdg~~las~s~dg--------~I~vwd~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~  167 (703)
                      ||||+.|++++.++        .|++||++ ++   +......++..                    .+..++|+|||++
T Consensus       196 SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~--------------------~~~~~~~spdg~l  255 (662)
T 3azo_A          196 SPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEE--------------------AIAQAEWAPDGSL  255 (662)
T ss_dssp             CTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTB--------------------CEEEEEECTTSCE
T ss_pred             CCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCc--------------------eEcceEECCCCeE
Confidence            99999999887553        79999998 56   33333333222                    6889999999997


Q ss_pred             EEEEecCC--cEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECC--CCCCCcc
Q psy7108         168 ILAAGQSK--YICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLP--GVKKGDM  243 (703)
Q Consensus       168 l~s~s~dg--~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iw--d~~~~~~  243 (703)
                      +++++.++  .|.+||+.+++.......+...........+..++|+|+++.++++.. +      .+++|  |..+++ 
T Consensus       256 ~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~------~~~l~~~d~~~~~-  327 (662)
T 3azo_A          256 IVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-G------AAVLGILDPESGE-  327 (662)
T ss_dssp             EEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-S------SCEEEEEETTTTE-
T ss_pred             EEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-C------ccEEEEEECCCCc-
Confidence            77777787  677777767765433221111000000011467889999998777664 3      34555  666555 


Q ss_pred             ceeecCCccceEEE-EEcCCCCEEEEEeCCC---EEEEEcCCCce
Q psy7108         244 AARVLKPEVRVFCV-KFSPTGQAWVAATTEG---VHIYSLDSGYV  284 (703)
Q Consensus       244 ~~~~~~h~~~V~~l-~~spdg~~l~s~s~Dg---v~iwd~~~~~~  284 (703)
                      ...+..+...+..+ +++++.-.+++++.+.   +.++++.+++.
T Consensus       328 ~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~  372 (662)
T 3azo_A          328 LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRA  372 (662)
T ss_dssp             EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred             EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCce
Confidence            45666677777776 4443332334555554   44556666654

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.48  E-value=1.5e-11  Score=125.64  Aligned_cols=234  Identities=14%  Similarity=0.187  Sum_probs=164.0

Q ss_pred             cCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEec------CCCcEEEEEEe-cCCCEEEEEEC-CCeE
Q psy7108          44 SGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQ------LLSDALCVAYK-PDGTEIVVATL-DGQL  115 (703)
Q Consensus        44 ~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~------~~~~V~~v~~s-pdg~~las~s~-dg~I  115 (703)
                      .+|-....+++++|  ++.++++.+.++.|++||.. ++.......      +...+.+++++ +++..+++... ++.|
T Consensus        26 ~g~~~~p~~v~~~~--~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i  102 (286)
T 1q7f_A           26 EGQFTEPSGVAVNA--QNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQI  102 (286)
T ss_dssp             TTCBSCEEEEEECT--TCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEE
T ss_pred             CCccCCCceEEECC--CCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEE
Confidence            35667789999999  99999988889999999976 434333321      23468899995 66666655533 8899


Q ss_pred             EEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEecc
Q psy7108         116 IMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQ  195 (703)
Q Consensus       116 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~  195 (703)
                      .+|| .+++.+..+....                   ...+..++++|+|+.+++...++.|.+||.. ++.+..+... 
T Consensus       103 ~~~d-~~g~~~~~~~~~~-------------------~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~-  160 (286)
T 1q7f_A          103 QIYN-QYGQFVRKFGATI-------------------LQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCS-  160 (286)
T ss_dssp             EEEC-TTSCEEEEECTTT-------------------CSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECT-
T ss_pred             EEEC-CCCcEEEEecCcc-------------------CCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCC-
Confidence            9999 5677666553321                   1257899999999988877778899999964 5555555421 


Q ss_pred             CCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCC--ccceEEEEEcCCCCEEEEEeCC-
Q psy7108         196 NKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKP--EVRVFCVKFSPTGQAWVAATTE-  272 (703)
Q Consensus       196 ~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h--~~~V~~l~~spdg~~l~s~s~D-  272 (703)
                           +....+..++++++|+.+++...+      ..|++||.. ++.+..+..+  ...+.+++++|+|+.+++...+ 
T Consensus       161 -----~~~~~p~~i~~~~~g~l~v~~~~~------~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~  228 (286)
T 1q7f_A          161 -----KHLEFPNGVVVNDKQEIFISDNRA------HCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNN  228 (286)
T ss_dssp             -----TTCSSEEEEEECSSSEEEEEEGGG------TEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSS
T ss_pred             -----CccCCcEEEEECCCCCEEEEECCC------CEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCC
Confidence                 112356889999999866665543      379999874 4444444332  3568999999999988888766 


Q ss_pred             C-EEEEEcCCCceecce--------eeeEEEccchhhhHhhcCCcceEEEEEEecC
Q psy7108         273 G-VHIYSLDSGYVFDPF--------LLDISITPQSVKEALADKDYAKALMMSLKLN  319 (703)
Q Consensus       273 g-v~iwd~~~~~~~~~~--------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~  319 (703)
                      + |.+|+.+ ++.+..+        ...++++|++  .++.+ +.++.+.+ |+..
T Consensus       229 ~~i~~~~~~-g~~~~~~~~~~~~~~~~~i~~~~~g--~l~vs-~~~~~v~v-~~~~  279 (286)
T 1q7f_A          229 FNLTIFTQD-GQLISALESKVKHAQCFDVALMDDG--SVVLA-SKDYRLYI-YRYV  279 (286)
T ss_dssp             CEEEEECTT-SCEEEEEEESSCCSCEEEEEEETTT--EEEEE-ETTTEEEE-EECS
T ss_pred             EEEEEECCC-CCEEEEEcccCCCCcceeEEECCCC--cEEEE-CCCCeEEE-EEcc
Confidence            3 9999964 4443322        2468899998  55555 45778877 7764

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.47  E-value=7.6e-12  Score=131.01  Aligned_cols=232  Identities=10%  Similarity=0.041  Sum_probs=160.4

Q ss_pred             ceeecc-CCCcccccccc-CCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc-eeEEEe---------cCCCcEE
Q psy7108          28 VKKGDM-AARVLKPEVLS-GHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD-TQHETI---------QLLSDAL   95 (703)
Q Consensus        28 v~~~d~-tg~~~~~~~l~-gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~-~~~~~~---------~~~~~V~   95 (703)
                      +..+|. +|+++  ..+. ++-....+++++|  +|+++++.+.++.|++|+..... .+..+-         .+-....
T Consensus        71 i~~~d~~~g~~~--~~~~~~~~~~p~gia~d~--~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~  146 (329)
T 3fvz_A           71 ILVIDPNNAEIL--QSSGKNLFYLPHGLSIDT--DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPT  146 (329)
T ss_dssp             EEEECTTTCCEE--EEECTTTCSSEEEEEECT--TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEE
T ss_pred             EEEEECCCCeEE--eccCCCccCCceEEEECC--CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCc
Confidence            566775 57776  5443 4556889999999  99999998889999999975542 233331         2334689


Q ss_pred             EEEEec-CCCEEEEEE-CCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC-CCEEEEEe
Q psy7108          96 CVAYKP-DGTEIVVAT-LDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD-GSCILAAG  172 (703)
Q Consensus        96 ~v~~sp-dg~~las~s-~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd-g~~l~s~s  172 (703)
                      .++++| ++..+++.+ .++.|++|| .+++.+..+.....-.          .....+-.....++++|+ +..+++..
T Consensus       147 ~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~----------~~~~~~~~~p~gia~d~~~g~l~v~d~  215 (329)
T 3fvz_A          147 DVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGS----------SPRPGQFSVPHSLALVPHLDQLCVADR  215 (329)
T ss_dssp             EEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSS----------SCCTTEESCEEEEEEETTTTEEEEEET
T ss_pred             EEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCC----------CCCCcccCCCcEEEEECCCCEEEEEEC
Confidence            999999 788777776 689999999 5677766664322100          000011124789999998 66666777


Q ss_pred             cCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccC-CCCCeeEEECCCCCCCccceeec---
Q psy7108         173 QSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRET-HEGGNVVLKLPGVKKGDMAARVL---  248 (703)
Q Consensus       173 ~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~-~~~~~~~i~iwd~~~~~~~~~~~---  248 (703)
                      .++.|++||..+++.+..+....      +...+..++++| +..+...+... .+.....+++||..+++.+..+.   
T Consensus       216 ~~~~I~~~~~~~G~~~~~~~~~~------~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~  288 (329)
T 3fvz_A          216 ENGRIQCFKTDTKEFVREIKHAS------FGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVR  288 (329)
T ss_dssp             TTTEEEEEETTTCCEEEEECCTT------TTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSS
T ss_pred             CCCEEEEEECCCCcEEEEEeccc------cCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCC
Confidence            78899999999888888775331      223566788888 43333322110 01122479999999998877763   


Q ss_pred             CCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCC
Q psy7108         249 KPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDS  281 (703)
Q Consensus       249 ~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~  281 (703)
                      .+...+.+++++|+|..+++...++ |++|+++.
T Consensus       289 ~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~  322 (329)
T 3fvz_A          289 KHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE  322 (329)
T ss_dssp             SCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred             CccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence            5666789999999997777777777 99999864

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.47  E-value=2.6e-11  Score=123.81  Aligned_cols=217  Identities=13%  Similarity=0.159  Sum_probs=152.3

Q ss_pred             ceeeccCCCcccccccc------CCCcCeEEEEEc-CCCCCCEEEEEeC-CCcEEEEEcCCCceeEEEec-CCCcEEEEE
Q psy7108          28 VKKGDMAARVLKPEVLS------GHEGPVSCIEFS-PVLSSTGMVSASW-DKTVKLWNAVETDTQHETIQ-LLSDALCVA   98 (703)
Q Consensus        28 v~~~d~tg~~~~~~~l~------gH~~~V~~l~~s-p~~dg~~L~sgs~-Dg~V~iWd~~~~~~~~~~~~-~~~~V~~v~   98 (703)
                      +..|+.+++.+  ..+.      +|...+.+++++ +  ++.++++... ++.|++|| .+++....+.. +...+.+++
T Consensus        53 i~~~d~~g~~~--~~~~~~~~~~~~~~~p~~i~~~~~--~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~  127 (286)
T 1q7f_A           53 IQIFDKEGRFK--FQFGECGKRDSQLLYPNRVAVVRN--SGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVT  127 (286)
T ss_dssp             EEEECTTSCEE--EEECCBSSSTTCBSSEEEEEEETT--TTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEE
T ss_pred             EEEECCCCcEE--EEecccCCCcccccCceEEEEEcC--CCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEE
Confidence            66788778776  5553      355678999994 6  7777777643 78999999 45544443322 345789999


Q ss_pred             EecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEE
Q psy7108          99 YKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYIC  178 (703)
Q Consensus        99 ~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~  178 (703)
                      ++|+|+.+++...++.|.+||.+ ++.+..+....                  +...+..++++|+|+.+++.+.++.|+
T Consensus       128 ~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~------------------~~~~p~~i~~~~~g~l~v~~~~~~~i~  188 (286)
T 1q7f_A          128 VDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSK------------------HLEFPNGVVVNDKQEIFISDNRAHCVK  188 (286)
T ss_dssp             ECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTT------------------TCSSEEEEEECSSSEEEEEEGGGTEEE
T ss_pred             EeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCC------------------ccCCcEEEEECCCCCEEEEECCCCEEE
Confidence            99999987777778999999964 55555553211                  112578999999999777777889999


Q ss_pred             EEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCc--cceEE
Q psy7108         179 IYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPE--VRVFC  256 (703)
Q Consensus       179 lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~--~~V~~  256 (703)
                      +||.. ++.+..+...      +....+..++++++|+.+++...++     ..|.+||. +++.+..+..+.  ..+.+
T Consensus       189 ~~~~~-g~~~~~~~~~------g~~~~p~~i~~d~~G~l~v~~~~~~-----~~i~~~~~-~g~~~~~~~~~~~~~~~~~  255 (286)
T 1q7f_A          189 VFNYE-GQYLRQIGGE------GITNYPIGVGINSNGEILIADNHNN-----FNLTIFTQ-DGQLISALESKVKHAQCFD  255 (286)
T ss_dssp             EEETT-CCEEEEESCT------TTSCSEEEEEECTTCCEEEEECSSS-----CEEEEECT-TSCEEEEEEESSCCSCEEE
T ss_pred             EEcCC-CCEEEEEccC------CccCCCcEEEECCCCCEEEEeCCCC-----EEEEEECC-CCCEEEEEcccCCCCccee
Confidence            99974 5555555322      1123567899999998766654431     27999995 455555554332  34789


Q ss_pred             EEEcCCCCEEEEEeCCC-EEEEEcCCC
Q psy7108         257 VKFSPTGQAWVAATTEG-VHIYSLDSG  282 (703)
Q Consensus       257 l~~spdg~~l~s~s~Dg-v~iwd~~~~  282 (703)
                      ++++|+|+.+++ +.++ |++|+....
T Consensus       256 i~~~~~g~l~vs-~~~~~v~v~~~~~~  281 (286)
T 1q7f_A          256 VALMDDGSVVLA-SKDYRLYIYRYVQL  281 (286)
T ss_dssp             EEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred             EEECCCCcEEEE-CCCCeEEEEEcccc
Confidence            999999987776 5677 999998654

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.46  E-value=9.7e-13  Score=140.70  Aligned_cols=220  Identities=9%  Similarity=-0.041  Sum_probs=141.7

Q ss_pred             eeeccCCCccccccccCCCcC-eEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEE-----------
Q psy7108          29 KKGDMAARVLKPEVLSGHEGP-VSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALC-----------   96 (703)
Q Consensus        29 ~~~d~tg~~~~~~~l~gH~~~-V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~-----------   96 (703)
                      ..++..+...  ..+..+... ..++.|+|  ||+.|+.++.++.|.+||+.+++.......+......           
T Consensus        63 ~~~d~~~~~~--~~l~~~~~~~~~~~~~sp--dg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~  138 (396)
T 3c5m_A           63 YLLNLETQQA--VQLTEGKGDNTFGGFIST--DERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTK  138 (396)
T ss_dssp             EEEETTTTEE--EECCCSSCBCTTTCEECT--TSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSE
T ss_pred             EEEECCCCcE--EEeecCCCCccccceECC--CCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCc
Confidence            3445444333  344444333 34488999  9999999999999999999877543322223332222           


Q ss_pred             --------EEEecCCCEEEEE-----ECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC
Q psy7108          97 --------VAYKPDGTEIVVA-----TLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA  163 (703)
Q Consensus        97 --------v~~spdg~~las~-----s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp  163 (703)
                              ++|+|+++.++.+     ..+..|++||+.+++........                     ..+..+.|+|
T Consensus       139 ~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~---------------------~~~~~~~~sp  197 (396)
T 3c5m_A          139 LVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDT---------------------AWLGHPIYRP  197 (396)
T ss_dssp             EEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEES---------------------SCEEEEEEET
T ss_pred             cccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCC---------------------cccccceECC
Confidence                    3567777766554     35668999999988766554322                     2688999999


Q ss_pred             -CCCEEEEEecC------CcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECC
Q psy7108         164 -DGSCILAAGQS------KYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLP  236 (703)
Q Consensus       164 -dg~~l~s~s~d------g~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iw  236 (703)
                       +++.|+.++.+      ..|.+||+.+++...... +.      ....+..++|+|+|+.+++.+..+ ......|++|
T Consensus       198 ~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~-~~------~~~~~~~~~~spdg~~l~~~~~~~-~~~~~~l~~~  269 (396)
T 3c5m_A          198 FDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE-HA------EGESCTHEFWIPDGSAMAYVSYFK-GQTDRVIYKA  269 (396)
T ss_dssp             TEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC-CC------TTEEEEEEEECTTSSCEEEEEEET-TTCCEEEEEE
T ss_pred             CCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec-cC------CCccccceEECCCCCEEEEEecCC-CCccceEEEE
Confidence             88877766543      368899987654322111 10      012567789999999877765432 1122359999


Q ss_pred             CCCCCccceeecCCccceEEEEEcC-CCCEEEEEe----------------CCC-EEEEEcCCCce
Q psy7108         237 GVKKGDMAARVLKPEVRVFCVKFSP-TGQAWVAAT----------------TEG-VHIYSLDSGYV  284 (703)
Q Consensus       237 d~~~~~~~~~~~~h~~~V~~l~~sp-dg~~l~s~s----------------~Dg-v~iwd~~~~~~  284 (703)
                      |+.+++.........  .. +.|+| ||+.+++++                .+. |.+|++.+++.
T Consensus       270 d~~~g~~~~l~~~~~--~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~  332 (396)
T 3c5m_A          270 NPETLENEEVMVMPP--CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA  332 (396)
T ss_dssp             CTTTCCEEEEEECCS--EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC
T ss_pred             ECCCCCeEEeeeCCC--CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce
Confidence            998886543322221  22 88999 999887754                234 99999987764

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.45  E-value=6.5e-12  Score=131.99  Aligned_cols=205  Identities=12%  Similarity=0.142  Sum_probs=136.9

Q ss_pred             cCeEEEEEcCCCCCCEEEEEeCC---Cc--EEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECC----------
Q psy7108          48 GPVSCIEFSPVLSSTGMVSASWD---KT--VKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLD----------  112 (703)
Q Consensus        48 ~~V~~l~~sp~~dg~~L~sgs~D---g~--V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~d----------  112 (703)
                      ..+.+++|+|  ||+.|+.++.+   +.  |.+|++.+++ ...+..+.. +.+++|+|||+.|++++.+          
T Consensus        59 ~~~~~~~~Sp--Dg~~la~~~~~~~~~~~~l~~~~~~~g~-~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~  134 (347)
T 2gop_A           59 ENATMPRISP--DGKKIAFMRANEEKKVSEIWVADLETLS-SKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFE  134 (347)
T ss_dssp             ESCEEEEECT--TSSEEEEEEEETTTTEEEEEEEETTTTE-EEEEEEESE-EEEEEECTTSSEEEEEEECCCC-------
T ss_pred             ccCCCeEECC--CCCEEEEEEeccCCCcceEEEEECCCCc-eEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEE
Confidence            5688999999  99999988754   33  6777887664 444444444 9999999999999888743          


Q ss_pred             -----------------CeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCC
Q psy7108         113 -----------------GQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSK  175 (703)
Q Consensus       113 -----------------g~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg  175 (703)
                                       ..|++||+.+++.+..+...                      .+..++|+||| .+++++.+.
T Consensus       135 ~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~----------------------~~~~~~~spdg-~~~~~~~~~  191 (347)
T 2gop_A          135 DDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKP----------------------RFSSGIWHRDK-IVVNVPHRE  191 (347)
T ss_dssp             --CCCC---------CEEEEEEEETTTTEEEEEEEEE----------------------TTCEEEEETTE-EEEEEECCC
T ss_pred             cccceeecCcccccCccceEEEEECCCCeEEeeecCC----------------------CcccccCCCCe-EEEEEeccc
Confidence                             57999999988764444331                      24678999999 777765442


Q ss_pred             -------cEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCC--CeeEEECCCCCCCcccee
Q psy7108         176 -------YICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEG--GNVVLKLPGVKKGDMAAR  246 (703)
Q Consensus       176 -------~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~--~~~~i~iwd~~~~~~~~~  246 (703)
                             ...+|.+.+++. ..+..+ .        .+..+  +|||+.+++.+..+..+  ....|.+||  +++....
T Consensus       192 ~~~~~~~~~~l~~~d~~~~-~~l~~~-~--------~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l  257 (347)
T 2gop_A          192 IIPQYFKFWDIYIWEDGKE-EKMFEK-V--------SFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGI  257 (347)
T ss_dssp             SSCCSSCCEEEEEEETTEE-EEEEEE-E--------SEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEES
T ss_pred             ccccccccccEEEeCCCce-EEeccC-c--------ceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEec
Confidence                   334443335543 333221 1        23333  99999888776543111  124788888  5655545


Q ss_pred             ecCCccceEE-EEEcCCCCEEEEEeCCC-EEEEEcCCCceecc-----eeeeEEEcc
Q psy7108         247 VLKPEVRVFC-VKFSPTGQAWVAATTEG-VHIYSLDSGYVFDP-----FLLDISITP  296 (703)
Q Consensus       247 ~~~h~~~V~~-l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~-----~~~~~~~sp  296 (703)
                      ...+...+.. +.|+ |+ .+++++.++ ++|| +++++....     ...+++++|
T Consensus       258 ~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~~~~~~~~v~~~~~s~  311 (347)
T 2gop_A          258 LDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKPIAKGRHWIMGFDVDE  311 (347)
T ss_dssp             STTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEEEECSSSEEEEEEESS
T ss_pred             cccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEEEecCCCeEEeeeeeC
Confidence            5566778886 9999 88 888889888 8999 875543221     124567777

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.44  E-value=1.4e-11  Score=126.72  Aligned_cols=239  Identities=13%  Similarity=0.121  Sum_probs=159.3

Q ss_pred             CCCccccccccCCCcCeEEEEEcCCCCCC-EEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECC
Q psy7108          34 AARVLKPEVLSGHEGPVSCIEFSPVLSST-GMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLD  112 (703)
Q Consensus        34 tg~~~~~~~l~gH~~~V~~l~~sp~~dg~-~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~d  112 (703)
                      .+..+  +.+..+.....+++|+|  +++ +++++..++.|..|+..++  ......+...+.+++++|+|+++++...+
T Consensus        16 ~~~~~--~~l~~~~~~~eg~~~d~--~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~   89 (296)
T 3e5z_A           16 AGAEA--RRLADGFTWTEGPVYVP--ARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGL   89 (296)
T ss_dssp             TTCCC--EEEECCCSSEEEEEEEG--GGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTT
T ss_pred             CCCcE--EEEecCCccccCCeEeC--CCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCC
Confidence            34444  66777777889999999  898 7888888999999998776  45555577789999999999988777667


Q ss_pred             CeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEE----e-------------cCC
Q psy7108         113 GQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAA----G-------------QSK  175 (703)
Q Consensus       113 g~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~----s-------------~dg  175 (703)
                      +.|.+||..+++..........                .....+..++++|+|+++++.    +             ..+
T Consensus        90 ~~i~~~d~~~g~~~~~~~~~~~----------------~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~  153 (296)
T 3e5z_A           90 RRLERQREPGGEWESIADSFEG----------------KKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGR  153 (296)
T ss_dssp             TEEEEECSTTCCEEEEECEETT----------------EECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSC
T ss_pred             CeEEEEcCCCCcEEEEeeccCC----------------CCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCc
Confidence            8999999988876543322111                001245679999999988873    2             124


Q ss_pred             cEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC-CCcc---ceeecCCc
Q psy7108         176 YICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK-KGDM---AARVLKPE  251 (703)
Q Consensus       176 ~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~-~~~~---~~~~~~h~  251 (703)
                      .|..+|.. ++. ..+...        ....+.++|+|+|+.+++....      ..|.+||+. +++.   ...+..+.
T Consensus       154 ~l~~~~~~-g~~-~~~~~~--------~~~~~gi~~s~dg~~lv~~~~~------~~i~~~~~~~~g~~~~~~~~~~~~~  217 (296)
T 3e5z_A          154 WVFRLAPD-GTL-SAPIRD--------RVKPNGLAFLPSGNLLVSDTGD------NATHRYCLNARGETEYQGVHFTVEP  217 (296)
T ss_dssp             EEEEECTT-SCE-EEEECC--------CSSEEEEEECTTSCEEEEETTT------TEEEEEEECSSSCEEEEEEEECCSS
T ss_pred             EEEEECCC-CCE-EEeecC--------CCCCccEEECCCCCEEEEeCCC------CeEEEEEECCCCcCcCCCeEeeCCC
Confidence            56666655 443 222211        1245789999999988444433      378999876 4443   22222344


Q ss_pred             cceEEEEEcCCCCEEEEEeCCCEEEEEcCCCceecce-----eeeEEE-ccchhhhHhhcCCcceEEEE
Q psy7108         252 VRVFCVKFSPTGQAWVAATTEGVHIYSLDSGYVFDPF-----LLDISI-TPQSVKEALADKDYAKALMM  314 (703)
Q Consensus       252 ~~V~~l~~spdg~~l~s~s~Dgv~iwd~~~~~~~~~~-----~~~~~~-spd~~~~~l~sg~~~~~l~l  314 (703)
                      ..+.+++++++|+.+++. ..+|.+|+.+ ++.+..+     ..+++| +|++  ..|..++.++..++
T Consensus       218 ~~p~~i~~d~~G~l~v~~-~~~v~~~~~~-g~~~~~~~~~~~~~~~~f~~~d~--~~L~v~t~~~l~~~  282 (296)
T 3e5z_A          218 GKTDGLRVDAGGLIWASA-GDGVHVLTPD-GDELGRVLTPQTTSNLCFGGPEG--RTLYMTVSTEFWSI  282 (296)
T ss_dssp             SCCCSEEEBTTSCEEEEE-TTEEEEECTT-SCEEEEEECSSCCCEEEEESTTS--CEEEEEETTEEEEE
T ss_pred             CCCCeEEECCCCCEEEEc-CCeEEEECCC-CCEEEEEECCCCceeEEEECCCC--CEEEEEcCCeEEEE
Confidence            557789999999976666 3349999986 5544333     345777 4676  33433344444443

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.43  E-value=5.3e-11  Score=124.32  Aligned_cols=227  Identities=11%  Similarity=0.084  Sum_probs=156.7

Q ss_pred             CCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECC-
Q psy7108          34 AARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLD-  112 (703)
Q Consensus        34 tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~d-  112 (703)
                      .++..  ..+.++...+.+++|+|  ++++++++..++.|.+||..+++.......+...+.+++++|+|+++++...+ 
T Consensus        33 ~~~~~--~~~~~~~~~~~~~~~~~--~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~  108 (333)
T 2dg1_A           33 TAEPW--LEISKKGLQLEGLNFDR--QGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDF  108 (333)
T ss_dssp             ECEEE--EEEESSCCCEEEEEECT--TSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTS
T ss_pred             cccee--EEEeccCccccCcEECC--CCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCC
Confidence            44455  56777777889999999  99988888889999999998775433333566789999999999988777666 


Q ss_pred             ---CeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec------CCcEEEEECC
Q psy7108         113 ---GQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ------SKYICIYSSR  183 (703)
Q Consensus       113 ---g~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~------dg~I~lwD~~  183 (703)
                         +.|.+||.++++....+....                  +...+.+++++|+|+.+++...      .+.|..+|..
T Consensus       109 ~~~~~i~~~d~~~~~~~~~~~~~~------------------~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~  170 (333)
T 2dg1_A          109 KSTGGIFAATENGDNLQDIIEDLS------------------TAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPD  170 (333)
T ss_dssp             SSCCEEEEECTTSCSCEEEECSSS------------------SCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTT
T ss_pred             CCCceEEEEeCCCCEEEEEEccCc------------------cCCcccceEECCCCCEEEEeccccccCCCceEEEEeCC
Confidence               689999998876543332111                  1236899999999988776653      3567777766


Q ss_pred             CCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCC-Ccccee--------ecCCccce
Q psy7108         184 EGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKK-GDMAAR--------VLKPEVRV  254 (703)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~-~~~~~~--------~~~h~~~V  254 (703)
                      +++...... .        ......++++|+|+.++++....     ..|.+||..+ +.....        ..++ ..+
T Consensus       171 ~~~~~~~~~-~--------~~~~~~i~~~~dg~~l~v~~~~~-----~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~  235 (333)
T 2dg1_A          171 FRTVTPIIQ-N--------ISVANGIALSTDEKVLWVTETTA-----NRLHRIALEDDGVTIQPFGATIPYYFTGH-EGP  235 (333)
T ss_dssp             SCCEEEEEE-E--------ESSEEEEEECTTSSEEEEEEGGG-----TEEEEEEECTTSSSEEEEEEEEEEECCSS-SEE
T ss_pred             CCEEEEeec-C--------CCcccceEECCCCCEEEEEeCCC-----CeEEEEEecCCCcCcccccceEEEecCCC-CCC
Confidence            554433221 1        12457899999999766654321     3788998863 332211        1112 467


Q ss_pred             EEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecc------------eeeeEEEccch
Q psy7108         255 FCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDP------------FLLDISITPQS  298 (703)
Q Consensus       255 ~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~------------~~~~~~~spd~  298 (703)
                      ..++++++|+.+++...++ |.+|+.+ ++.+..            ....++|+|++
T Consensus       236 ~~i~~d~~G~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~g~~~~~~~~~~~~dg  291 (333)
T 2dg1_A          236 DSCCIDSDDNLYVAMYGQGRVLVFNKR-GYPIGQILIPGRDEGHMLRSTHPQFIPGT  291 (333)
T ss_dssp             EEEEEBTTCCEEEEEETTTEEEEECTT-SCEEEEEECTTGGGTCSCBCCEEEECTTS
T ss_pred             CceEECCCCCEEEEEcCCCEEEEECCC-CCEEEEEEcCCCccccccCcceEEECCCC
Confidence            8899999999888777777 9999984 443222            24567888876

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.39  E-value=7e-11  Score=121.37  Aligned_cols=212  Identities=10%  Similarity=0.032  Sum_probs=149.6

Q ss_pred             ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecC----CCcEEEEEEecCC
Q psy7108          28 VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQL----LSDALCVAYKPDG  103 (703)
Q Consensus        28 v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~----~~~V~~v~~spdg  103 (703)
                      +..|+..+. .  +.+..+...+.+++++|  +|.++++...++.|.+||..+++........    ...+.+++++|+|
T Consensus        52 i~~~~~~~~-~--~~~~~~~~~~~~l~~~~--dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G  126 (296)
T 3e5z_A           52 TWAWSDDGQ-L--SPEMHPSHHQNGHCLNK--QGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDG  126 (296)
T ss_dssp             EEEEETTSC-E--EEEESSCSSEEEEEECT--TCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTS
T ss_pred             EEEEECCCC-e--EEEECCCCCcceeeECC--CCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCC
Confidence            455676665 5  67777888899999999  9998888877889999998777533222111    2345679999999


Q ss_pred             CEEEEE----E-------------CCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCC
Q psy7108         104 TEIVVA----T-------------LDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGS  166 (703)
Q Consensus       104 ~~las~----s-------------~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~  166 (703)
                      +.+++.    +             ..+.|..++.. ++.. .+....                    .....++|+|||+
T Consensus       127 ~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~-~~~~~~--------------------~~~~gi~~s~dg~  184 (296)
T 3e5z_A          127 SLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLS-APIRDR--------------------VKPNGLAFLPSGN  184 (296)
T ss_dssp             CEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEE-EEECCC--------------------SSEEEEEECTTSC
T ss_pred             CEEEECCccccccccccccccccCCCcEEEEECCC-CCEE-EeecCC--------------------CCCccEEECCCCC
Confidence            988873    2             13456666655 4432 332222                    2568899999999


Q ss_pred             EEEEEecCCcEEEEECC-CCce---EEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCc
Q psy7108         167 CILAAGQSKYICIYSSR-EGIL---LKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGD  242 (703)
Q Consensus       167 ~l~s~s~dg~I~lwD~~-~~~~---~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~  242 (703)
                      .+++.+.++.|.+||+. +++.   ...+ ..       ....+..++++++|+..++.  .      ..|.+||.. ++
T Consensus       185 ~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~-------~~~~p~~i~~d~~G~l~v~~--~------~~v~~~~~~-g~  247 (296)
T 3e5z_A          185 LLVSDTGDNATHRYCLNARGETEYQGVHF-TV-------EPGKTDGLRVDAGGLIWASA--G------DGVHVLTPD-GD  247 (296)
T ss_dssp             EEEEETTTTEEEEEEECSSSCEEEEEEEE-CC-------SSSCCCSEEEBTTSCEEEEE--T------TEEEEECTT-SC
T ss_pred             EEEEeCCCCeEEEEEECCCCcCcCCCeEe-eC-------CCCCCCeEEECCCCCEEEEc--C------CeEEEECCC-CC
Confidence            99777778899999997 5554   2222 11       12355679999999866655  2      269999986 66


Q ss_pred             cceeecCCccceEEEEE-cCCCCEEEEEeCCCEEEEEcCCCce
Q psy7108         243 MAARVLKPEVRVFCVKF-SPTGQAWVAATTEGVHIYSLDSGYV  284 (703)
Q Consensus       243 ~~~~~~~h~~~V~~l~~-spdg~~l~s~s~Dgv~iwd~~~~~~  284 (703)
                      ....+..+.. +.+++| +|+++.|++++.+++..++..+...
T Consensus       248 ~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~l~~~~~~~~~~  289 (296)
T 3e5z_A          248 ELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTEFWSIETNVRGL  289 (296)
T ss_dssp             EEEEEECSSC-CCEEEEESTTSCEEEEEETTEEEEEECSCCBC
T ss_pred             EEEEEECCCC-ceeEEEECCCCCEEEEEcCCeEEEEEcccccc
Confidence            6667776766 899999 6899999988888777777766543

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.36  E-value=5e-11  Score=120.33  Aligned_cols=233  Identities=11%  Similarity=0.028  Sum_probs=155.5

Q ss_pred             CeEEEEEcCCCCCCEEE-EEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEE
Q psy7108          49 PVSCIEFSPVLSSTGMV-SASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVG  127 (703)
Q Consensus        49 ~V~~l~~sp~~dg~~L~-sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~  127 (703)
                      ...+++++|  ++++++ +.+.++.|.+|+..+.............+.+++++++|+.+++.. ++.|.+||.++.... 
T Consensus        25 ~p~~i~~~~--~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~-  100 (270)
T 1rwi_B           25 SPSGVAVDS--AGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT-  100 (270)
T ss_dssp             CEEEEEECT--TCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE-
T ss_pred             CccceEECC--CCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe-
Confidence            678999999  898777 547788999998755432211122335678899999999655554 889999998765432 


Q ss_pred             EEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccce
Q psy7108         128 SVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFIN  207 (703)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~  207 (703)
                      .+....                   ...+..++++|+|+.+++...++.|.+||..+.......  .      .....+.
T Consensus       101 ~~~~~~-------------------~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~--~------~~~~~p~  153 (270)
T 1rwi_B          101 VLPFDG-------------------LNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLP--F------TGLNDPD  153 (270)
T ss_dssp             ECCCCS-------------------CSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECC--C------CSCCSCC
T ss_pred             eeecCC-------------------cCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeec--c------ccCCCce
Confidence            221110                   125789999999997777777889999986654432211  0      1112567


Q ss_pred             eeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceec
Q psy7108         208 RRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFD  286 (703)
Q Consensus       208 ~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~  286 (703)
                      .++++++|+.+++....      ..|.+||............+...+.+++++++|..+++...++ |.+|+..+.....
T Consensus       154 ~i~~~~~g~l~v~~~~~------~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~  227 (270)
T 1rwi_B          154 GVAVDNSGNVYVTDTDN------NRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV  227 (270)
T ss_dssp             CEEECTTCCEEEEEGGG------TEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE
T ss_pred             eEEEeCCCCEEEEECCC------CEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee
Confidence            89999999866555443      2789999876654333333336688999999997777776666 9999987654321


Q ss_pred             ------ceeeeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108         287 ------PFLLDISITPQSVKEALADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       287 ------~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~  321 (703)
                            .....+++++++  .+..+...++.+.+ +++.++
T Consensus       228 ~~~~~~~~p~~i~~~~~g--~l~v~~~~~~~v~~-~~~~~~  265 (270)
T 1rwi_B          228 LPFTGLNTPLAVAVDSDR--TVYVADRGNDRVVK-LTSLEH  265 (270)
T ss_dssp             CCCCSCSCEEEEEECTTC--CEEEEEGGGTEEEE-ECCCGG
T ss_pred             eccCCCCCceeEEECCCC--CEEEEECCCCEEEE-EcCCCc
Confidence                  123568889988  56666666777776 676654

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.34  E-value=1.1e-10  Score=122.08  Aligned_cols=218  Identities=13%  Similarity=0.136  Sum_probs=153.2

Q ss_pred             ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCC-----CcEEEEEEec
Q psy7108          28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLL-----SDALCVAYKP  101 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~-----~~V~~v~~sp  101 (703)
                      +.++| .+++.+  .++.. ......+++++  ++..+++...++.|.+||..+++....+....     .....+++  
T Consensus        66 v~viD~~t~~~~--~~i~~-~~~p~~i~~~~--~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--  138 (328)
T 3dsm_A           66 IFAIDINTFKEV--GRITG-FTSPRYIHFLS--DEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--  138 (328)
T ss_dssp             EEEEETTTCCEE--EEEEC-CSSEEEEEEEE--TTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--
T ss_pred             EEEEECcccEEE--EEcCC-CCCCcEEEEeC--CCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--
Confidence            55566 468877  66653 46688999999  88555555588999999998875443333222     15566777  


Q ss_pred             CCCEEEEEE--CCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC-----
Q psy7108         102 DGTEIVVAT--LDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS-----  174 (703)
Q Consensus       102 dg~~las~s--~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d-----  174 (703)
                      ++..++++.  .++.|.++|+.+++....+....                     ....++++|+|++++++..+     
T Consensus       139 ~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~---------------------~p~~i~~~~dG~l~v~~~~~~~~~~  197 (328)
T 3dsm_A          139 YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGI---------------------QPTSLVMDKYNKMWTITDGGYEGSP  197 (328)
T ss_dssp             ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSS---------------------CBCCCEECTTSEEEEEBCCBCTTCS
T ss_pred             ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCC---------------------CccceEEcCCCCEEEEECCCccCCc
Confidence            355555555  48899999999998887776432                     24568899999977776554     


Q ss_pred             -----CcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcccee--e
Q psy7108         175 -----KYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAAR--V  247 (703)
Q Consensus       175 -----g~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~--~  247 (703)
                           +.|.++|..+++....+.....       .....++++|+++.++++..        .|.+||..+++....  .
T Consensus       198 ~~~~~~~v~~id~~t~~v~~~~~~~~g-------~~p~~la~~~d~~~lyv~~~--------~v~~~d~~t~~~~~~~~~  262 (328)
T 3dsm_A          198 YGYEAPSLYRIDAETFTVEKQFKFKLG-------DWPSEVQLNGTRDTLYWINN--------DIWRMPVEADRVPVRPFL  262 (328)
T ss_dssp             SCBCCCEEEEEETTTTEEEEEEECCTT-------CCCEEEEECTTSCEEEEESS--------SEEEEETTCSSCCSSCSB
T ss_pred             cccCCceEEEEECCCCeEEEEEecCCC-------CCceeEEEecCCCEEEEEcc--------EEEEEECCCCceeeeeee
Confidence                 7899999999988777654322       25678999999998888654        478899888765321  1


Q ss_pred             cCCccceEEEEEcCCCCEE-EEE----eCCC-EEEEEcCCCceeccee
Q psy7108         248 LKPEVRVFCVKFSPTGQAW-VAA----TTEG-VHIYSLDSGYVFDPFL  289 (703)
Q Consensus       248 ~~h~~~V~~l~~spdg~~l-~s~----s~Dg-v~iwd~~~~~~~~~~~  289 (703)
                      ........+++++|++..+ ++.    ..++ |.+|+.+ ++....+.
T Consensus       263 ~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~  309 (328)
T 3dsm_A          263 EFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFY  309 (328)
T ss_dssp             CCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEE
T ss_pred             cCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEE
Confidence            1124568899999955444 555    4556 9999998 77665543

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.33  E-value=1.8e-10  Score=117.26  Aligned_cols=193  Identities=15%  Similarity=0.096  Sum_probs=151.0

Q ss_pred             CCCEEEEEeCCCcEEEEEcCCCceeEEEecCC-CcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCC
Q psy7108          60 SSTGMVSASWDKTVKLWNAVETDTQHETIQLL-SDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSG  138 (703)
Q Consensus        60 dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~-~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~  138 (703)
                      .++.|++++.|+.|.+||.++++.+.+...+. ..+.+++++|+|+.++  +.++.|..||. +++.+..+.....    
T Consensus         4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~----   76 (276)
T 3no2_A            4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAG----   76 (276)
T ss_dssp             CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTT----
T ss_pred             CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCC----
Confidence            47899999999999999998997776666555 4789999999999888  45788999999 8998888876421    


Q ss_pred             CCCCccchhhcccCCccEEEEEEcCCCCEEEEEec-CCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCE
Q psy7108         139 RLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ-SKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNV  217 (703)
Q Consensus       139 ~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~-dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~  217 (703)
                                     ..+.++.+.|||+.+++.+. ++.+..+|. +++.+.++.....  ..+.......+++.++|++
T Consensus        77 ---------------~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~--~~~~~~~~~~v~~~~~G~~  138 (276)
T 3no2_A           77 ---------------CEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETG--IERPHAQFRQINKNKKGNY  138 (276)
T ss_dssp             ---------------CEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCS--CSSGGGSCSCCEECTTSCE
T ss_pred             ---------------ccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCC--CCcccccccCceECCCCCE
Confidence                           15788999999999999887 778888885 6888877765332  1122234556788999999


Q ss_pred             EEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCcee
Q psy7108         218 SLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVF  285 (703)
Q Consensus       218 l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~  285 (703)
                      +++...++      .|..||.. |+.+.++..+ ..+.++...++|+.+++++.++ |..+|.++|+.+
T Consensus       139 lv~~~~~~------~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~  199 (276)
T 3no2_A          139 LVPLFATS------EVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIV  199 (276)
T ss_dssp             EEEETTTT------EEEEECTT-SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEE
T ss_pred             EEEecCCC------EEEEECCC-CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEE
Confidence            88766543      89999988 8887777654 3456778899999999888887 999999888774

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.30  E-value=1.3e-09  Score=113.66  Aligned_cols=212  Identities=10%  Similarity=0.054  Sum_probs=137.1

Q ss_pred             ceeeccC-CCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCC----CcEEEEEcCCCceeEEEe--cCCCcEEEEEEe
Q psy7108          28 VKKGDMA-ARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWD----KTVKLWNAVETDTQHETI--QLLSDALCVAYK  100 (703)
Q Consensus        28 v~~~d~t-g~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~D----g~V~iWd~~~~~~~~~~~--~~~~~V~~v~~s  100 (703)
                      +..||.. ++..  .....+...+.+++++|  +|+++++...+    +.|.+||..++.......  .....+.+++++
T Consensus        68 i~~~d~~~~~~~--~~~~~~~~~~~~i~~~~--dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d  143 (333)
T 2dg1_A           68 IFKINPETKEIK--RPFVSHKANPAAIKIHK--DGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFD  143 (333)
T ss_dssp             EEEECTTTCCEE--EEEECSSSSEEEEEECT--TSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEEC
T ss_pred             EEEEeCCCCcEE--EEeeCCCCCcceEEECC--CCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEEC
Confidence            5566754 4443  33335678899999999  99988887766    689999987764332222  244578999999


Q ss_pred             cCCCEEEEEEC------CCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEE-ec
Q psy7108         101 PDGTEIVVATL------DGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAA-GQ  173 (703)
Q Consensus       101 pdg~~las~s~------dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~-s~  173 (703)
                      |+|+.+++...      .+.|..+|.++++....... .                    ..+..++|+|+|+.++.+ +.
T Consensus       144 ~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~--------------------~~~~~i~~~~dg~~l~v~~~~  202 (333)
T 2dg1_A          144 SKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN-I--------------------SVANGIALSTDEKVLWVTETT  202 (333)
T ss_dssp             TTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE-E--------------------SSEEEEEECTTSSEEEEEEGG
T ss_pred             CCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC-C--------------------CcccceEECCCCCEEEEEeCC
Confidence            99987776653      35677777665554332222 1                    147889999999866554 56


Q ss_pred             CCcEEEEECCC-CceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCcc
Q psy7108         174 SKYICIYSSRE-GILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEV  252 (703)
Q Consensus       174 dg~I~lwD~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~  252 (703)
                      ++.|.+||+.+ +.....+.........++ ..+..++++++|+..+....+      ..|.+||. +++....+..+..
T Consensus       203 ~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~------~~v~~~d~-~g~~~~~~~~~~~  274 (333)
T 2dg1_A          203 ANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQ------GRVLVFNK-RGYPIGQILIPGR  274 (333)
T ss_dssp             GTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETT------TEEEEECT-TSCEEEEEECTTG
T ss_pred             CCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCC------CEEEEECC-CCCEEEEEEcCCC
Confidence            78999999964 433322211000001111 256779999999876665433      26899998 4555555544433


Q ss_pred             ------ceEEEEEcCCCCEEEEEeCC
Q psy7108         253 ------RVFCVKFSPTGQAWVAATTE  272 (703)
Q Consensus       253 ------~V~~l~~spdg~~l~s~s~D  272 (703)
                            .+.+++|+||++.|+.++.+
T Consensus       275 ~~g~~~~~~~~~~~~dg~~L~v~~~~  300 (333)
T 2dg1_A          275 DEGHMLRSTHPQFIPGTNQLIICSND  300 (333)
T ss_dssp             GGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred             ccccccCcceEEECCCCCEEEEEeCc
Confidence                  68899999998777655544

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.29  E-value=1.7e-10  Score=116.36  Aligned_cols=218  Identities=11%  Similarity=-0.043  Sum_probs=143.7

Q ss_pred             ceeeccCCCccccccc-cCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEe-cCCCcEEEEEEecCCCE
Q psy7108          28 VKKGDMAARVLKPEVL-SGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETI-QLLSDALCVAYKPDGTE  105 (703)
Q Consensus        28 v~~~d~tg~~~~~~~l-~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~-~~~~~V~~v~~spdg~~  105 (703)
                      +..++..+...  ..+ ..+...+.++++++  +++++++.. ++.|.+||..+... .... .....+.+++++|+|+.
T Consensus        48 i~~~~~~~~~~--~~~~~~~~~~p~~i~~~~--~g~l~v~~~-~~~i~~~d~~~~~~-~~~~~~~~~~p~~i~~~~~g~l  121 (270)
T 1rwi_B           48 VVKLATGSTGT--TVLPFNGLYQPQGLAVDG--AGTVYVTDF-NNRVVTLAAGSNNQ-TVLPFDGLNYPEGLAVDTQGAV  121 (270)
T ss_dssp             EEEECC-------EECCCCSCCSCCCEEECT--TCCEEEEET-TTEEEEECTTCSCC-EECCCCSCSSEEEEEECTTCCE
T ss_pred             EEEecCCCccc--ceEeeCCcCCcceeEECC--CCCEEEEcC-CCEEEEEeCCCceE-eeeecCCcCCCcceEECCCCCE
Confidence            44555444333  222 23445688999999  888777666 88999999865532 2222 23357899999999997


Q ss_pred             EEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCC
Q psy7108         106 IVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREG  185 (703)
Q Consensus       106 las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~  185 (703)
                      +++...++.|.+|+..+..........                    ...+..++++++|+.+++...++.|.+||....
T Consensus       122 ~v~~~~~~~i~~~~~~~~~~~~~~~~~--------------------~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~  181 (270)
T 1rwi_B          122 YVADRGNNRVVKLAAGSKTQTVLPFTG--------------------LNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESN  181 (270)
T ss_dssp             EEEEGGGTEEEEECTTCCSCEECCCCS--------------------CCSCCCEEECTTCCEEEEEGGGTEEEEECTTTC
T ss_pred             EEEECCCCEEEEEECCCceeEeecccc--------------------CCCceeEEEeCCCCEEEEECCCCEEEEEecCCC
Confidence            777777889999976554432211111                    114577999999997777777789999998876


Q ss_pred             ceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCE
Q psy7108         186 ILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQA  265 (703)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~  265 (703)
                      .......        .....+..++++++|..+++....      ..|.+||............+...+.+++++|+|+.
T Consensus       182 ~~~~~~~--------~~~~~p~~i~~d~~g~l~v~~~~~------~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l  247 (270)
T 1rwi_B          182 NQVVLPF--------TDITAPWGIAVDEAGTVYVTEHNT------NQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTV  247 (270)
T ss_dssp             CEEECCC--------SSCCSEEEEEECTTCCEEEEETTT------SCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCE
T ss_pred             ceEeecc--------cCCCCceEEEECCCCCEEEEECCC------CcEEEEcCCCCcceeeccCCCCCceeEEECCCCCE
Confidence            5432111        011356789999999665555433      26888988655433222233356899999999997


Q ss_pred             EEEEeCCC-EEEEEcCCCcee
Q psy7108         266 WVAATTEG-VHIYSLDSGYVF  285 (703)
Q Consensus       266 l~s~s~Dg-v~iwd~~~~~~~  285 (703)
                      +++...++ |+++++...+.+
T Consensus       248 ~v~~~~~~~v~~~~~~~~~~~  268 (270)
T 1rwi_B          248 YVADRGNDRVVKLTSLEHHHH  268 (270)
T ss_dssp             EEEEGGGTEEEEECCCGGGSC
T ss_pred             EEEECCCCEEEEEcCCCcccc
Confidence            78888788 999998765543

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.29  E-value=5.6e-10  Score=113.66  Aligned_cols=205  Identities=8%  Similarity=0.068  Sum_probs=153.3

Q ss_pred             ceeecc-CCCccccccccCCC-cCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecC-CCcEEEEEEecCCC
Q psy7108          28 VKKGDM-AARVLKPEVLSGHE-GPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQL-LSDALCVAYKPDGT  104 (703)
Q Consensus        28 v~~~d~-tg~~~~~~~l~gH~-~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~-~~~V~~v~~spdg~  104 (703)
                      +..||. +|+.+  ..+..+. ..+.++.++|  +|++++  +.++.|+.||. +++.+.+.... ...+.++.+.|+|+
T Consensus        17 v~~~d~~tG~~~--w~~~~~~~~~~~~~~~~p--dG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~   89 (276)
T 3no2_A           17 IAIINKDTKEIV--WEYPLEKGWECNSVAATK--AGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGN   89 (276)
T ss_dssp             EEEEETTTTEEE--EEEECCTTCCCCEEEECT--TSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSC
T ss_pred             EEEEECCCCeEE--EEeCCCccCCCcCeEECC--CCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCC
Confidence            345565 89988  8887766 5789999999  999998  34678999998 77666666554 35788999999999


Q ss_pred             EEEEEEC-CCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECC
Q psy7108         105 EIVVATL-DGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSR  183 (703)
Q Consensus       105 ~las~s~-dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~  183 (703)
                      .+++.+. ++.|..+|. +|+.+..+.......              .+......++..++|+++++...++.|..||..
T Consensus        90 ~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~--------------~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~  154 (276)
T 3no2_A           90 ALVAWCGHPSTILEVNM-KGEVLSKTEFETGIE--------------RPHAQFRQINKNKKGNYLVPLFATSEVREIAPN  154 (276)
T ss_dssp             EEEEEESTTEEEEEECT-TSCEEEEEEECCSCS--------------SGGGSCSCCEECTTSCEEEEETTTTEEEEECTT
T ss_pred             EEEEecCCCCEEEEEeC-CCCEEEEEeccCCCC--------------cccccccCceECCCCCEEEEecCCCEEEEECCC
Confidence            9999887 778888886 677777765422100              000123345779999999999999999999988


Q ss_pred             CCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCc------cceEEE
Q psy7108         184 EGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPE------VRVFCV  257 (703)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~------~~V~~l  257 (703)
                       |+.+.++....         ...++...++|..++++..+      ..|..+|..+|+.+.++..+.      ..+.++
T Consensus       155 -G~~~w~~~~~~---------~~~~~~~~~~g~~~v~~~~~------~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~  218 (276)
T 3no2_A          155 -GQLLNSVKLSG---------TPFSSAFLDNGDCLVACGDA------HCFVQLNLESNRIVRRVNANDIEGVQLFFVAQL  218 (276)
T ss_dssp             -SCEEEEEECSS---------CCCEEEECTTSCEEEECBTT------SEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEE
T ss_pred             -CCEEEEEECCC---------CccceeEcCCCCEEEEeCCC------CeEEEEeCcCCcEEEEecCCCCCCccccccccc
Confidence             99888887531         34456778999988776654      279999999998877765332      237888


Q ss_pred             EEcCCCCEEEEEe
Q psy7108         258 KFSPTGQAWVAAT  270 (703)
Q Consensus       258 ~~spdg~~l~s~s  270 (703)
                      +..++|+.+++..
T Consensus       219 ~~~~~G~i~v~~~  231 (276)
T 3no2_A          219 FPLQNGGLYICNW  231 (276)
T ss_dssp             EECTTSCEEEEEE
T ss_pred             eEcCCCCEEEEec
Confidence            8999999887774

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.28  E-value=9.1e-10  Score=115.10  Aligned_cols=240  Identities=8%  Similarity=0.036  Sum_probs=159.7

Q ss_pred             cCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEE
Q psy7108          48 GPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVG  127 (703)
Q Consensus        48 ~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~  127 (703)
                      ....++.+.   ++..+++...++.|.+||..+++....+ ........++++++++..++...++.|.+||..+++...
T Consensus        44 ~~~~~i~~~---~~~lyv~~~~~~~v~viD~~t~~~~~~i-~~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~  119 (328)
T 3dsm_A           44 DVAQSMVIR---DGIGWIVVNNSHVIFAIDINTFKEVGRI-TGFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITG  119 (328)
T ss_dssp             SCEEEEEEE---TTEEEEEEGGGTEEEEEETTTCCEEEEE-ECCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEE
T ss_pred             ccceEEEEE---CCEEEEEEcCCCEEEEEECcccEEEEEc-CCCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEE
Confidence            446778875   4566677777899999999988765555 455678999999998544444378999999999998877


Q ss_pred             EEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe--cCCcEEEEECCCCceEEEEEeccCCcccccccc
Q psy7108         128 SVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG--QSKYICIYSSREGILLKKFTITQNKSLDGINDF  205 (703)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s--~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~  205 (703)
                      .+......               ........+++  ++..+.+++  .++.|.++|+.+++.+.++....         .
T Consensus       120 ~i~~g~~~---------------~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~---------~  173 (328)
T 3dsm_A          120 YIECPDMD---------------MESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGI---------Q  173 (328)
T ss_dssp             EEECTTCC---------------TTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSS---------C
T ss_pred             EEEcCCcc---------------ccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCC---------C
Confidence            76643210               00012334566  345555554  47899999999998887775321         3


Q ss_pred             ceeeeeccCCCEEEEEcccCCCC----CeeEEECCCCCCCccceeecCC-ccceEEEEEcCCCCEEEEEeCCCEEEEEcC
Q psy7108         206 INRRKMTEFGNVSLIETRETHEG----GNVVLKLPGVKKGDMAARVLKP-EVRVFCVKFSPTGQAWVAATTEGVHIYSLD  280 (703)
Q Consensus       206 v~~~~~spdg~~l~~~~~~~~~~----~~~~i~iwd~~~~~~~~~~~~h-~~~V~~l~~spdg~~l~s~s~Dgv~iwd~~  280 (703)
                      ...++++|+|+.++++.......    ....|.++|..+++....+... ......++++|+++.+.++.. .|.+||..
T Consensus       174 p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~-~v~~~d~~  252 (328)
T 3dsm_A          174 PTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN-DIWRMPVE  252 (328)
T ss_dssp             BCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS-SEEEEETT
T ss_pred             ccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc-EEEEEECC
Confidence            45788999998666554321000    0147999999888766555432 236889999999999887765 78999998


Q ss_pred             CCceec--------ceeeeEEEccchhhhHhhc-C--CcceEEEEEEecC
Q psy7108         281 SGYVFD--------PFLLDISITPQSVKEALAD-K--DYAKALMMSLKLN  319 (703)
Q Consensus       281 ~~~~~~--------~~~~~~~~spd~~~~~l~s-g--~~~~~l~la~~l~  319 (703)
                      +++...        .....++++|++-..+++. +  ...+.+.+ ++.+
T Consensus       253 t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v-~d~~  301 (328)
T 3dsm_A          253 ADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYR-YSPQ  301 (328)
T ss_dssp             CSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEE-ECTT
T ss_pred             CCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEE-ECCC
Confidence            876531        1235688998542333332 1  33555555 6554

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.27  E-value=2e-10  Score=133.40  Aligned_cols=239  Identities=10%  Similarity=0.044  Sum_probs=154.7

Q ss_pred             eEEeeecccCCceEEecC-------Cceeecc-CCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCc--------
Q psy7108           9 LIETRETHEGGNVVLKLP-------GVKKGDM-AARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKT--------   72 (703)
Q Consensus         9 ~~~~~~~~~~~~~~i~~~-------~v~~~d~-tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~--------   72 (703)
                      .....+..+|....+...       .+.+||. +|+.+  .... ....+.+++|+|  ||+.|+.++.++.        
T Consensus       127 ~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~--~~~~-~~~~~~~~~wsp--Dg~~l~~~~~~~~~~~~~~~~  201 (710)
T 2xdw_A          127 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKEL--PDVL-ERVKFSCMAWTH--DGKGMFYNAYPQQDGKSDGTE  201 (710)
T ss_dssp             EEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEE--EEEE-EEECSCCEEECT--TSSEEEEEECCCCSSCCSSSC
T ss_pred             EEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCC--cccc-cCcccceEEEEe--CCCEEEEEEECCccccccccc
Confidence            334445445544444332       3556664 45444  2211 222367899999  9999999988766        


Q ss_pred             --------EEEEEcCCCcee-EEEec---CCCcEEEEEEecCCCEEEEEEC-----CCeEEEEEcCC------Cc-EEEE
Q psy7108          73 --------VKLWNAVETDTQ-HETIQ---LLSDALCVAYKPDGTEIVVATL-----DGQLIMFDVES------AA-QVGS  128 (703)
Q Consensus        73 --------V~iWd~~~~~~~-~~~~~---~~~~V~~v~~spdg~~las~s~-----dg~I~vwd~~~------~~-~~~~  128 (703)
                              |++|++.++... ..+..   +...+..++|+|||++|+.++.     +..|++||+.+      +. ....
T Consensus       202 ~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~  281 (710)
T 2xdw_A          202 TSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVK  281 (710)
T ss_dssp             CCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEE
T ss_pred             cccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEE
Confidence                    999999877532 22222   3455789999999999988765     56899999986      42 3444


Q ss_pred             EeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC----CcEEEEECCCCce--EEEEEeccCCccccc
Q psy7108         129 VEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS----KYICIYSSREGIL--LKKFTITQNKSLDGI  202 (703)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d----g~I~lwD~~~~~~--~~~~~~~~~~~~~~~  202 (703)
                      +..+..                    .+.. .|+|+|+.|+..+..    ..|.+||+.++..  .+.+..+..      
T Consensus       282 l~~~~~--------------------~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~------  334 (710)
T 2xdw_A          282 LIDNFE--------------------GEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHE------  334 (710)
T ss_dssp             EECSSS--------------------SCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCS------
T ss_pred             eeCCCC--------------------cEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCC------
Confidence            444332                    2333 488999988876543    3599999987642  233332211      


Q ss_pred             cccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEE-EEeC---CC-EEEE
Q psy7108         203 NDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWV-AATT---EG-VHIY  277 (703)
Q Consensus       203 ~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~-s~s~---Dg-v~iw  277 (703)
                      ...+..+++++++..++....+    +...|.+||+.+++....+..+.+.+..++++|+++.++ +.+.   .+ +.+|
T Consensus       335 ~~~~~~~~~~~~~~lv~~~~~~----g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~  410 (710)
T 2xdw_A          335 KDVLEWVACVRSNFLVLCYLHD----VKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHC  410 (710)
T ss_dssp             SCEEEEEEEETTTEEEEEEEET----TEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEE
T ss_pred             CCeEEEEEEEcCCEEEEEEEEC----CEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEE
Confidence            0256778888666655554433    234688888877876677777778899999999998764 3332   24 8899


Q ss_pred             EcCCCc
Q psy7108         278 SLDSGY  283 (703)
Q Consensus       278 d~~~~~  283 (703)
                      |+.+++
T Consensus       411 d~~tg~  416 (710)
T 2xdw_A          411 DLTKEE  416 (710)
T ss_dssp             ETTSSS
T ss_pred             ECCCCc
Confidence            998876

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.22  E-value=1.8e-10  Score=121.98  Aligned_cols=172  Identities=12%  Similarity=0.106  Sum_probs=128.9

Q ss_pred             CeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc----------eeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEE
Q psy7108          49 PVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD----------TQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMF  118 (703)
Q Consensus        49 ~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~----------~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vw  118 (703)
                      +++.+++++  ...++++|+.|+ +++|++++..          .......+.. |+.++|  |++.|+++ .++.|++|
T Consensus        39 ~~nlLais~--~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~  111 (388)
T 1xip_A           39 SLQNLDISN--SKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSL  111 (388)
T ss_dssp             CCBCEEEET--TTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEE
T ss_pred             cccEEEEcC--CCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEE
Confidence            689999999  899999999985 5669865332          1123345667 999999  89999998 88999999


Q ss_pred             EcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCc
Q psy7108         119 DVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKS  198 (703)
Q Consensus       119 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~  198 (703)
                      |+++.........+..                    .+.++.+.+.  .+++++.||.+.+||+.++.....        
T Consensus       112 dv~sl~~~~~~~~~~~--------------------~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~~--------  161 (388)
T 1xip_A          112 DLEELSEFRTVTSFEK--------------------PVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQL--------  161 (388)
T ss_dssp             ESSSTTCEEEEEECSS--------------------CEEEEEECSS--EEEEEETTSEEEEEETTTCCEEEE--------
T ss_pred             EchhhhccCccceeec--------------------ceeeEEecCC--CEEEEECCCCEEEEEccCCccccc--------
Confidence            9988765555554432                    5777776654  388889999999999998876431        


Q ss_pred             cccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcc--ceee------c---CCccceEEEEEcCCCCEEE
Q psy7108         199 LDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDM--AARV------L---KPEVRVFCVKFSPTGQAWV  267 (703)
Q Consensus       199 ~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~--~~~~------~---~h~~~V~~l~~spdg~~l~  267 (703)
                          ...|++++|||+|  ++++..++      .+++|+...++.  ...+      .   +|+..|.++.|.+++.+++
T Consensus       162 ----~~~Vs~v~WSpkG--~~vg~~dg------~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv  229 (388)
T 1xip_A          162 ----AQNVTSFDVTNSQ--LAVLLKDR------SFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLA  229 (388)
T ss_dssp             ----EESEEEEEECSSE--EEEEETTS------CEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEE
T ss_pred             ----cCCceEEEEcCCc--eEEEEcCC------cEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEE
Confidence                1378999999999  45555543      688887776654  3334      2   3678899999999998886


Q ss_pred             EE
Q psy7108         268 AA  269 (703)
Q Consensus       268 s~  269 (703)
                      +=
T Consensus       230 ~y  231 (388)
T 1xip_A          230 VF  231 (388)
T ss_dssp             EE
T ss_pred             EE
Confidence            53

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.21  E-value=7.8e-10  Score=115.95  Aligned_cols=197  Identities=12%  Similarity=0.150  Sum_probs=125.7

Q ss_pred             eeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCC---------------------------CcEEEEEcCCCc
Q psy7108          30 KGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWD---------------------------KTVKLWNAVETD   82 (703)
Q Consensus        30 ~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~D---------------------------g~V~iWd~~~~~   82 (703)
                      .++..+...  ..+..+.. +.+++|+|  ||+.|+.++.+                           ..|.+||+.+++
T Consensus        89 ~~~~~~g~~--~~l~~~~~-~~~~~wsp--dg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~  163 (347)
T 2gop_A           89 VADLETLSS--KKILEAKN-IRSLEWNE--DSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEE  163 (347)
T ss_dssp             EEETTTTEE--EEEEEESE-EEEEEECT--TSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTE
T ss_pred             EEECCCCce--EEEEcCCC-ccceeECC--CCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCe
Confidence            445433333  34444445 99999999  99999888642                           568899998775


Q ss_pred             eeEEEecCCCcEEEEEEecCCCEEEEEECCC-------eEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCcc
Q psy7108          83 TQHETIQLLSDALCVAYKPDGTEIVVATLDG-------QLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKA  155 (703)
Q Consensus        83 ~~~~~~~~~~~V~~v~~spdg~~las~s~dg-------~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (703)
                      ....+.. . .+..++|+||| .++++..++       ...+|.+++++.. .+..+ .                    .
T Consensus       164 ~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~l~~~-~--------------------~  218 (347)
T 2gop_A          164 VIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEE-KMFEK-V--------------------S  218 (347)
T ss_dssp             EEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEEE-EEEEE-E--------------------S
T ss_pred             EEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCceE-EeccC-c--------------------c
Confidence            4244433 3 78899999999 777776542       3344444455433 33222 2                    3


Q ss_pred             EEEEEEcCCCCEEEEEecC--------CcEEEEECCCCceEEEEEeccCCcccccccccee-eeeccCCCEEEEEcccCC
Q psy7108         156 VSTVCYSADGSCILAAGQS--------KYICIYSSREGILLKKFTITQNKSLDGINDFINR-RKMTEFGNVSLIETRETH  226 (703)
Q Consensus       156 V~~i~~spdg~~l~s~s~d--------g~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~spdg~~l~~~~~~~~  226 (703)
                      +..+  +|||+.|+.++.+        ..|.+||  +++.....        ..+...+.. +.|+ +| .++++..++ 
T Consensus       219 ~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~--------~~~~~~~~~~~~~s-dg-~~~~~~~~~-  283 (347)
T 2gop_A          219 FYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGIL--------DEVDRGVGQAKIKD-GK-VYFTLFEEG-  283 (347)
T ss_dssp             EEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESS--------TTCCSEEEEEEEET-TE-EEEEEEETT-
T ss_pred             eeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEecc--------ccCCcccCCccEEc-Cc-EEEEEecCC-
Confidence            4444  9999998877644        3688888  45432211        122335665 8899 88 555555442 


Q ss_pred             CCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC--EEEEEcC
Q psy7108         227 EGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG--VHIYSLD  280 (703)
Q Consensus       227 ~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg--v~iwd~~  280 (703)
                           .+++| +.+++. ..+..+...|.+++|+|  ..+++++.++  ..+|.++
T Consensus       284 -----~~~l~-~~~g~~-~~~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~  330 (347)
T 2gop_A          284 -----SVNLY-IWDGEI-KPIAKGRHWIMGFDVDE--IVVYLKETATRLRELFTWD  330 (347)
T ss_dssp             -----EEEEE-EESSSE-EEEECSSSEEEEEEESS--SEEEEEECSSSCCEEEEES
T ss_pred             -----cEEEE-EcCCce-EEEecCCCeEEeeeeeC--cEEEEEcCCCChHHheEeC
Confidence                 67777 765554 34445577899999999  6777777666  4788876

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.18  E-value=3e-09  Score=109.62  Aligned_cols=237  Identities=10%  Similarity=0.054  Sum_probs=150.9

Q ss_pred             CCCcCeEEEEEcCCCCCCEEEE-------EeCCCcEEEEEcCCCceeEEEec-----CCCcEEEEEEecC-CCEEEEEEC
Q psy7108          45 GHEGPVSCIEFSPVLSSTGMVS-------ASWDKTVKLWNAVETDTQHETIQ-----LLSDALCVAYKPD-GTEIVVATL  111 (703)
Q Consensus        45 gH~~~V~~l~~sp~~dg~~L~s-------gs~Dg~V~iWd~~~~~~~~~~~~-----~~~~V~~v~~spd-g~~las~s~  111 (703)
                      ..-....+++|++  ++.++++       +..++.|.+||..+++.. ....     +...+.+++++++ |+.++ ++.
T Consensus        15 ~~~~~~~~~~~~~--~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~g~l~v-~~~   90 (314)
T 1pjx_A           15 EDIPGAEGPVFDK--NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKT-VICKPEVNGYGGIPAGCQCDRDANQLFV-ADM   90 (314)
T ss_dssp             CCCTTCEEEEECT--TSCEEEEETTCEETTEECCEEEEECTTTCCEE-EEECCEETTEECCEEEEEECSSSSEEEE-EET
T ss_pred             ccCCCccCceECC--CCCEEEEEeccccCCCCCCEEEEEeCCCCcEE-EEEecccCCCCCCCceEEEecCCCcEEE-EEC
Confidence            3344568999999  8988888       577889999998776532 2222     4467899999999 65444 444


Q ss_pred             CCeEEEEEcCCCcEEEE-EeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC---------------C
Q psy7108         112 DGQLIMFDVESAAQVGS-VEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS---------------K  175 (703)
Q Consensus       112 dg~I~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d---------------g  175 (703)
                      ++.|.+||.+ ++.... ......                .....+.+++++++|+.+++...+               +
T Consensus        91 ~~~l~~~d~~-g~~~~~~~~~~~~----------------~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~  153 (314)
T 1pjx_A           91 RLGLLVVQTD-GTFEEIAKKDSEG----------------RRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFG  153 (314)
T ss_dssp             TTEEEEEETT-SCEEECCSBCTTS----------------CBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCE
T ss_pred             CCCEEEEeCC-CCEEEEEeccCCC----------------ccccCCcCEEECCCCCEEEEecCcccccccccccccCCCC
Confidence            5589999988 664322 111100                012257889999999988776655               5


Q ss_pred             cEEEEECCCCceEEEEEeccCCccccccccceeeeec----cCCCEEEEEcccCCCCCeeEEECCCCC-CCc-----cce
Q psy7108         176 YICIYSSREGILLKKFTITQNKSLDGINDFINRRKMT----EFGNVSLIETRETHEGGNVVLKLPGVK-KGD-----MAA  245 (703)
Q Consensus       176 ~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s----pdg~~l~~~~~~~~~~~~~~i~iwd~~-~~~-----~~~  245 (703)
                      .|..||.. ++...... ..        .....++++    |+|+.++++...+     ..|.+||.. +++     ...
T Consensus       154 ~l~~~~~~-g~~~~~~~-~~--------~~~~~i~~~~~~d~dg~~l~v~~~~~-----~~i~~~~~~~~g~~~~~~~~~  218 (314)
T 1pjx_A          154 SIYCFTTD-GQMIQVDT-AF--------QFPNGIAVRHMNDGRPYQLIVAETPT-----KKLWSYDIKGPAKIENKKVWG  218 (314)
T ss_dssp             EEEEECTT-SCEEEEEE-EE--------SSEEEEEEEECTTSCEEEEEEEETTT-----TEEEEEEEEETTEEEEEEEEE
T ss_pred             eEEEECCC-CCEEEecc-CC--------CCcceEEEecccCCCCCEEEEEECCC-----CeEEEEECCCCCccccceEEE
Confidence            67778766 54433222 11        134678899    9997666654321     368888875 343     122


Q ss_pred             eecCCc-cceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecc------eeeeEEEccchhhhHhhcCCcceEEEEEEe
Q psy7108         246 RVLKPE-VRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDP------FLLDISITPQSVKEALADKDYAKALMMSLK  317 (703)
Q Consensus       246 ~~~~h~-~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~------~~~~~~~spd~~~~~l~sg~~~~~l~la~~  317 (703)
                      .+..+. ..+..++++++|+.+++...++ |.+|+.++++....      ...+++++|++.. +..+...++.+.. ++
T Consensus       219 ~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~-l~v~~~~~~~l~~-~~  296 (314)
T 1pjx_A          219 HIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKT-IFVTEHENNAVWK-FE  296 (314)
T ss_dssp             ECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSE-EEEEETTTTEEEE-EE
T ss_pred             ECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCE-EEEEeCCCCeEEE-Ee
Confidence            223333 5678899999999888776666 99999886654322      2356888898822 3333333344444 55


Q ss_pred             cC
Q psy7108         318 LN  319 (703)
Q Consensus       318 l~  319 (703)
                      +.
T Consensus       297 ~~  298 (314)
T 1pjx_A          297 WQ  298 (314)
T ss_dssp             CS
T ss_pred             CC
Confidence            44

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.18  E-value=3.7e-09  Score=118.46  Aligned_cols=201  Identities=9%  Similarity=0.025  Sum_probs=143.9

Q ss_pred             CCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcC--CCcEEEEEeccccCCC
Q psy7108          60 SSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVE--SAAQVGSVEARRDLDS  137 (703)
Q Consensus        60 dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~--~~~~~~~~~~~~~~~~  137 (703)
                      .+.++++...+++|.++|..+++.+..+ .....+..+.|+|||+++++++.|+.|.+||+.  +++.+..+....    
T Consensus       166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i-~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~----  240 (567)
T 1qks_A          166 ENLFSVTLRDAGQIALIDGSTYEIKTVL-DTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS----  240 (567)
T ss_dssp             GGEEEEEETTTTEEEEEETTTCCEEEEE-ECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS----
T ss_pred             CceEEEEeCCCCeEEEEECCCCeEEEEE-eCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC----
Confidence            4567777888999999999888655444 455567899999999999999999999999996  788777776533    


Q ss_pred             CCCCCccchhhcccCCccEEEEEEc----CCCCEEEEEec-CCcEEEEECCCCceEEEEEeccCC--cccccc-ccceee
Q psy7108         138 GRLDTDLVTREQSLKAKAVSTVCYS----ADGSCILAAGQ-SKYICIYSSREGILLKKFTITQNK--SLDGIN-DFINRR  209 (703)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~V~~i~~s----pdg~~l~s~s~-dg~I~lwD~~~~~~~~~~~~~~~~--~~~~~~-~~v~~~  209 (703)
                                       ....++|+    |||+++++++. ++++.++|..+.+.++++......  ....+. ..+..+
T Consensus       241 -----------------~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i  303 (567)
T 1qks_A          241 -----------------EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAI  303 (567)
T ss_dssp             -----------------EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEE
T ss_pred             -----------------CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEE
Confidence                             35789999    69999888764 588999999999998877643210  000111 156678


Q ss_pred             eeccCCCEEEEEcccCCCCCeeEEECCCCCCCcccee-ecCCccceEEEEEcCCCCEEEEEeCC-C-EEEEEcCCCceec
Q psy7108         210 KMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAAR-VLKPEVRVFCVKFSPTGQAWVAATTE-G-VHIYSLDSGYVFD  286 (703)
Q Consensus       210 ~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~-~~~h~~~V~~l~~spdg~~l~s~s~D-g-v~iwd~~~~~~~~  286 (703)
                      ..++++..+++...+.     ..|.++|....+.... .........++.|+|||++++++... + |.++|+.+++...
T Consensus       304 ~~s~~~~~~vv~~~~~-----g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~  378 (567)
T 1qks_A          304 LASHYRPEFIVNVKET-----GKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVA  378 (567)
T ss_dssp             EECSSSSEEEEEETTT-----TEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEE
T ss_pred             EEcCCCCEEEEEecCC-----CeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEE
Confidence            8888887766655432     3677777665432111 11223346688999999998776643 3 9999999987654


Q ss_pred             c
Q psy7108         287 P  287 (703)
Q Consensus       287 ~  287 (703)
                      .
T Consensus       379 ~  379 (567)
T 1qks_A          379 I  379 (567)
T ss_dssp             E
T ss_pred             E
Confidence            3

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.15  E-value=2e-08  Score=112.56  Aligned_cols=225  Identities=16%  Similarity=0.092  Sum_probs=151.9

Q ss_pred             ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcC--CCceeEEEecCCCcEEEEEEe----
Q psy7108          28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAV--ETDTQHETIQLLSDALCVAYK----  100 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~--~~~~~~~~~~~~~~V~~v~~s----  100 (703)
                      +.++| .+++.+  .++... ..+..+.|+|  ||+++++++.|+.|.+||+.  +.+....+ ........++|+    
T Consensus       179 V~viD~~t~~v~--~~i~~g-~~p~~v~~Sp--DGr~lyv~~~dg~V~viD~~~~t~~~v~~i-~~G~~P~~ia~s~~~~  252 (567)
T 1qks_A          179 IALIDGSTYEIK--TVLDTG-YAVHISRLSA--SGRYLFVIGRDGKVNMIDLWMKEPTTVAEI-KIGSEARSIETSKMEG  252 (567)
T ss_dssp             EEEEETTTCCEE--EEEECS-SCEEEEEECT--TSCEEEEEETTSEEEEEETTSSSCCEEEEE-ECCSEEEEEEECCSTT
T ss_pred             EEEEECCCCeEE--EEEeCC-CCccceEECC--CCCEEEEEcCCCeEEEEECCCCCCcEeEEE-ecCCCCceeEEccccC
Confidence            44455 466776  666533 3567999999  99999999999999999995  66544443 344567899999    


Q ss_pred             cCCCEEEEEEC-CCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccC-CccEEEEEEcCCCCEEEE-EecCCcE
Q psy7108         101 PDGTEIVVATL-DGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLK-AKAVSTVCYSADGSCILA-AGQSKYI  177 (703)
Q Consensus       101 pdg~~las~s~-dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~V~~i~~spdg~~l~s-~s~dg~I  177 (703)
                      |||+++++++. +++|.++|..+.+.+..+........          ....| ...+..+..++++..++. ...+|.|
T Consensus       253 pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~----------~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v  322 (567)
T 1qks_A          253 WEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYD----------EQEYHPEPRVAAILASHYRPEFIVNVKETGKI  322 (567)
T ss_dssp             CTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTT----------TCCEESCCCEEEEEECSSSSEEEEEETTTTEE
T ss_pred             CCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccc----------cccccCCCceEEEEEcCCCCEEEEEecCCCeE
Confidence            69998887765 58999999999999887764211000          00001 115778888988765554 4566899


Q ss_pred             EEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC-----Ccc
Q psy7108         178 CIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK-----PEV  252 (703)
Q Consensus       178 ~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~-----h~~  252 (703)
                      .++|..+.+..........       .....+.|+|+|+++++++...     ..|.++|..+++....+.-     |.+
T Consensus       323 ~~vd~~~~~~~~v~~i~~~-------~~~~d~~~~pdgr~~~va~~~s-----n~V~ViD~~t~kl~~~i~vgg~~Phpg  390 (567)
T 1qks_A          323 LLVDYTDLNNLKTTEISAE-------RFLHDGGLDGSHRYFITAANAR-----NKLVVIDTKEGKLVAIEDTGGQTPHPG  390 (567)
T ss_dssp             EEEETTCSSEEEEEEEECC-------SSEEEEEECTTSCEEEEEEGGG-----TEEEEEETTTTEEEEEEECSSSSBCCT
T ss_pred             EEEecCCCccceeeeeecc-------ccccCceECCCCCEEEEEeCCC-----CeEEEEECCCCcEEEEEeccCcCCCCc
Confidence            9999987654433322221       2455788999999988877543     3789999999876655443     322


Q ss_pred             ceEEEEEcCCCCEE-EEEe-CCC-EEEEEcCC
Q psy7108         253 RVFCVKFSPTGQAW-VAAT-TEG-VHIYSLDS  281 (703)
Q Consensus       253 ~V~~l~~spdg~~l-~s~s-~Dg-v~iwd~~~  281 (703)
                      .-..+ ++|++..+ +++. .++ |.+++.++
T Consensus       391 ~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~  421 (567)
T 1qks_A          391 RGANF-VHPTFGPVWATSHMGDDSVALIGTDP  421 (567)
T ss_dssp             TCEEE-EETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred             cceee-ECCCCCcEEEeCCCCCCeEEEecCCC
Confidence            22122 58885554 5553 345 99999987

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.15  E-value=1.4e-08  Score=104.25  Aligned_cols=219  Identities=13%  Similarity=0.086  Sum_probs=140.7

Q ss_pred             CCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCc
Q psy7108          45 GHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAA  124 (703)
Q Consensus        45 gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~  124 (703)
                      .+..---+..|+|. ++.++++...++.|..||..++..  ........+.+++++|+|+++++ . ++.|.+||.++++
T Consensus        10 ~~~~~~Egp~w~~~-~~~l~~~d~~~~~i~~~d~~~~~~--~~~~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~   84 (297)
T 3g4e_A           10 ENCRCGESPVWEEV-SNSLLFVDIPAKKVCRWDSFTKQV--QRVTMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQS   84 (297)
T ss_dssp             CCCSBEEEEEEETT-TTEEEEEETTTTEEEEEETTTCCE--EEEECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTE
T ss_pred             cCCccccCCeEECC-CCEEEEEECCCCEEEEEECCCCcE--EEEeCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCc
Confidence            33445568899992 345566666788999999887643  33456678999999999995544 3 6789999998876


Q ss_pred             EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC---------CcEEEEECCC-CceEEEEEec
Q psy7108         125 QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS---------KYICIYSSRE-GILLKKFTIT  194 (703)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d---------g~I~lwD~~~-~~~~~~~~~~  194 (703)
                      ..........                .....+..++++|+|+++++...+         ..-.+|.+.. ++...... .
T Consensus        85 ~~~~~~~~~~----------------~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~-~  147 (297)
T 3g4e_A           85 AVVLATVDND----------------KKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFD-Q  147 (297)
T ss_dssp             EEEEEECCTT----------------CSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEE-E
T ss_pred             EEEEEecCCC----------------CCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEee-c
Confidence            5433322111                012257899999999977654321         2234444432 33322221 1


Q ss_pred             cCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCC--CCCccc-----eeecCCccceEEEEEcCCCCEEE
Q psy7108         195 QNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGV--KKGDMA-----ARVLKPEVRVFCVKFSPTGQAWV  267 (703)
Q Consensus       195 ~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~--~~~~~~-----~~~~~h~~~V~~l~~spdg~~l~  267 (703)
                              ....+.++|+|+++.++++....     ..|..||+  .++...     ..+..+...+..++++++|+..+
T Consensus       148 --------~~~pngi~~spdg~~lyv~~~~~-----~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwv  214 (297)
T 3g4e_A          148 --------VDISNGLDWSLDHKIFYYIDSLS-----YSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWV  214 (297)
T ss_dssp             --------ESBEEEEEECTTSCEEEEEEGGG-----TEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEE
T ss_pred             --------cccccceEEcCCCCEEEEecCCC-----CcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEE
Confidence                    12457899999999776655432     36888875  455421     11222345678999999998777


Q ss_pred             EEeCCC-EEEEEcCCCceecce------eeeEEEc-cch
Q psy7108         268 AATTEG-VHIYSLDSGYVFDPF------LLDISIT-PQS  298 (703)
Q Consensus       268 s~s~Dg-v~iwd~~~~~~~~~~------~~~~~~s-pd~  298 (703)
                      +....+ |.+|+.++++....+      ..+++|. |++
T Consensus       215 a~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~  253 (297)
T 3g4e_A          215 ACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNY  253 (297)
T ss_dssp             EEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGG
T ss_pred             EEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCC
Confidence            777666 999999888765433      3557776 655

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.15  E-value=6.2e-08  Score=98.62  Aligned_cols=227  Identities=10%  Similarity=0.066  Sum_probs=151.5

Q ss_pred             ecccCCceEEecCC--ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEe--c
Q psy7108          14 ETHEGGNVVLKLPG--VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETI--Q   89 (703)
Q Consensus        14 ~~~~~~~~~i~~~~--v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~--~   89 (703)
                      +...|..++....+  +..++..++.. ...+..+...+.++++++  ++.++++...++.|..|+.. +. .....  .
T Consensus        22 ~d~~g~l~v~~~~~~~v~~~d~~~~~~-~~~~~~~~~~~~~i~~~~--~g~l~v~~~~~~~i~~~~~~-g~-~~~~~~~~   96 (299)
T 2z2n_A           22 VSDKGKVWITQHKANMISCINLDGKIT-EYPLPTPDAKVMCLTISS--DGEVWFTENAANKIGRITKK-GI-IKEYTLPN   96 (299)
T ss_dssp             ECTTSCEEEEETTTTEEEEECTTCCEE-EEECSSTTCCEEEEEECT--TSCEEEEETTTTEEEEECTT-SC-EEEEECSS
T ss_pred             ECCCCCEEEEecCCCcEEEEcCCCCeE-EecCCcccCceeeEEECC--CCCEEEeCCCCCeEEEECCC-Cc-EEEEeCCC
Confidence            34455545444322  66677665443 011223557899999999  99988887778889999975 32 22222  2


Q ss_pred             CCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEE
Q psy7108          90 LLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCIL  169 (703)
Q Consensus        90 ~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~  169 (703)
                      ....+.+++++++|+.+++...++.|..||. +++.... ....                  ....+..++++++|+..+
T Consensus        97 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~-~~~~------------------~~~~~~~i~~~~~g~l~v  156 (299)
T 2z2n_A           97 PDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREY-ELPN------------------KGSYPSFITLGSDNALWF  156 (299)
T ss_dssp             TTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEE-ECSS------------------TTCCEEEEEECTTSCEEE
T ss_pred             cCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEe-cCCC------------------CCCCCceEEEcCCCCEEE
Confidence            4557899999999988877777889999998 5554322 1110                  122688999999998887


Q ss_pred             EEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcccee-ec
Q psy7108         170 AAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAAR-VL  248 (703)
Q Consensus       170 s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~-~~  248 (703)
                      +...++.|..||. +++... +....      ....+..++++++|+..+.....      ..|..||. +++.... ..
T Consensus       157 ~~~~~~~i~~~~~-~g~~~~-~~~~~------~~~~~~~i~~~~~g~l~v~~~~~------~~i~~~~~-~g~~~~~~~~  221 (299)
T 2z2n_A          157 TENQNNAIGRITE-SGDITE-FKIPT------PASGPVGITKGNDDALWFVEIIG------NKIGRITT-SGEITEFKIP  221 (299)
T ss_dssp             EETTTTEEEEECT-TCCEEE-EECSS------TTCCEEEEEECTTSSEEEEETTT------TEEEEECT-TCCEEEEECS
T ss_pred             EeCCCCEEEEEcC-CCcEEE-eeCCC------CCCcceeEEECCCCCEEEEccCC------ceEEEECC-CCcEEEEECC
Confidence            7777789999998 665443 22111      12356789999999866654433      26888888 6653322 22


Q ss_pred             CCccceEEEEEcCCCCEEEEEeCCC-EEEEEcC
Q psy7108         249 KPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLD  280 (703)
Q Consensus       249 ~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~  280 (703)
                      .+...+.+++++++|+.+++...++ |.+|+..
T Consensus       222 ~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~  254 (299)
T 2z2n_A          222 TPNARPHAITAGAGIDLWFTEWGANKIGRLTSN  254 (299)
T ss_dssp             STTCCEEEEEECSTTCEEEEETTTTEEEEEETT
T ss_pred             CCCCCceeEEECCCCCEEEeccCCceEEEECCC
Confidence            3456789999999999766665555 9999983

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.14  E-value=2e-08  Score=102.31  Aligned_cols=230  Identities=9%  Similarity=0.065  Sum_probs=154.5

Q ss_pred             ccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEe--cCCCcEEEEEEecCCCEEEEEECCCeEEEEEc
Q psy7108          43 LSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETI--QLLSDALCVAYKPDGTEIVVATLDGQLIMFDV  120 (703)
Q Consensus        43 l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~--~~~~~V~~v~~spdg~~las~s~dg~I~vwd~  120 (703)
                      +..+...+.++++++  +|.++++...++.|.+||.. +. .....  .....+.+++++++|..+++...++.|..||.
T Consensus        10 ~~~~~~~~~~i~~d~--~g~l~v~~~~~~~v~~~d~~-~~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~   85 (299)
T 2z2n_A           10 LTNQDTGPYGITVSD--KGKVWITQHKANMISCINLD-GK-ITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITK   85 (299)
T ss_dssp             CCSSSCCEEEEEECT--TSCEEEEETTTTEEEEECTT-CC-EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred             CCCcCCCccceEECC--CCCEEEEecCCCcEEEEcCC-CC-eEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECC
Confidence            345567899999999  99988877778899999987 43 33322  24567999999999998777766889999998


Q ss_pred             CCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccc
Q psy7108         121 ESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLD  200 (703)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~  200 (703)
                      + ++. ..+....                  ....+..++++++|+.+++...++.|..||. +++.. .+....     
T Consensus        86 ~-g~~-~~~~~~~------------------~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~-~~~~~~-----  138 (299)
T 2z2n_A           86 K-GII-KEYTLPN------------------PDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIR-EYELPN-----  138 (299)
T ss_dssp             T-SCE-EEEECSS------------------TTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE-EEECSS-----
T ss_pred             C-CcE-EEEeCCC------------------cCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEE-EecCCC-----
Confidence            6 432 2232110                  1226889999999988887777889999998 55443 222111     


Q ss_pred             cccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcccee-ecCCccceEEEEEcCCCCEEEEEeCCC-EEEEE
Q psy7108         201 GINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAAR-VLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYS  278 (703)
Q Consensus       201 ~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~-~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd  278 (703)
                       ....+..++++++|+..++....      ..|..+|. +++.... .......+.+++++++|+.+++...++ |.+|+
T Consensus       139 -~~~~~~~i~~~~~g~l~v~~~~~------~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~  210 (299)
T 2z2n_A          139 -KGSYPSFITLGSDNALWFTENQN------NAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRIT  210 (299)
T ss_dssp             -TTCCEEEEEECTTSCEEEEETTT------TEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEEC
T ss_pred             -CCCCCceEEEcCCCCEEEEeCCC------CEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEEC
Confidence             12357889999999876665433      26888888 6654332 223445688999999998777666566 99999


Q ss_pred             cCCCceec-------ceeeeEEEccchhhhHhhcCCcceEEEE
Q psy7108         279 LDSGYVFD-------PFLLDISITPQSVKEALADKDYAKALMM  314 (703)
Q Consensus       279 ~~~~~~~~-------~~~~~~~~spd~~~~~l~sg~~~~~l~l  314 (703)
                      . +++...       .....+++++++  .+..+....+.+..
T Consensus       211 ~-~g~~~~~~~~~~~~~~~~i~~~~~g--~l~v~~~~~~~i~~  250 (299)
T 2z2n_A          211 T-SGEITEFKIPTPNARPHAITAGAGI--DLWFTEWGANKIGR  250 (299)
T ss_dssp             T-TCCEEEEECSSTTCCEEEEEECSTT--CEEEEETTTTEEEE
T ss_pred             C-CCcEEEEECCCCCCCceeEEECCCC--CEEEeccCCceEEE
Confidence            8 555321       113457788887  44333323344443

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=99.13  E-value=1.9e-08  Score=106.98  Aligned_cols=226  Identities=11%  Similarity=0.017  Sum_probs=141.2

Q ss_pred             eeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEe----------CCCcEEEEEcCCCceeEEEecC-------
Q psy7108          29 KKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSAS----------WDKTVKLWNAVETDTQHETIQL-------   90 (703)
Q Consensus        29 ~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs----------~Dg~V~iWd~~~~~~~~~~~~~-------   90 (703)
                      ..+| .+++.+  ..+.....+  .++++|  ||++++.+.          .++.|.+||..+.+....+...       
T Consensus        50 ~v~D~~t~~~~--~~i~~g~~p--~i~~sp--Dg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~  123 (373)
T 2mad_H           50 WVLDAGSGSIL--GHVNGGFLP--NPVAAH--SGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDV  123 (373)
T ss_pred             EEEECCCCeEE--EEecCCCCC--CeEECC--CCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCcccccc
Confidence            4455 367766  666544444  899999  999998885          3678999999877654443221       


Q ss_pred             CCcEEEEEEecCCCEEEEEEC--CCeEEEEEcCCCcEEEE-EeccccCCCCCCCCccchhhcccCCccEEEEEEcCCC-C
Q psy7108          91 LSDALCVAYKPDGTEIVVATL--DGQLIMFDVESAAQVGS-VEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADG-S  166 (703)
Q Consensus        91 ~~~V~~v~~spdg~~las~s~--dg~I~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg-~  166 (703)
                      ......++|+|||++|+++..  ++.|.++| .+++.+.. +....                        ++.+.|++ +
T Consensus       124 g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~------------------------~~~~~~~~~~  178 (373)
T 2mad_H          124 GPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT------------------------CYHIHPGAPS  178 (373)
T ss_pred             CCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc------------------------eEEEEeCCCc
Confidence            133568999999999998874  47899999 99988776 54321                        12223332 2


Q ss_pred             EEEEEecCCcEEEEECCCCceEEE--------------------------------------------------EEeccC
Q psy7108         167 CILAAGQSKYICIYSSREGILLKK--------------------------------------------------FTITQN  196 (703)
Q Consensus       167 ~l~s~s~dg~I~lwD~~~~~~~~~--------------------------------------------------~~~~~~  196 (703)
                      .+++.+.||.+.++|. +++....                                                  +.....
T Consensus       179 ~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~  257 (373)
T 2mad_H          179 TFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSG  257 (373)
T ss_pred             eEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCC
Confidence            2333344455555554 3333211                                                  100000


Q ss_pred             Cc-ccc-ccccceeeeeccCCCEEEEEcccCCC----CCeeEEECCCCCCCccceeecCCccceEEEEEcCCCC-EEEEE
Q psy7108         197 KS-LDG-INDFINRRKMTEFGNVSLIETRETHE----GGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQ-AWVAA  269 (703)
Q Consensus       197 ~~-~~~-~~~~v~~~~~spdg~~l~~~~~~~~~----~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~-~l~s~  269 (703)
                      .. ..+ .......+.++|+++.+++....+..    .....|.+.|..+++.+.++.. .....+++|+|||+ .++++
T Consensus       258 ~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~  336 (373)
T 2mad_H          258 GRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL-GHDVDAISVAQDGGPDLYAL  336 (373)
T ss_pred             cccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC-CCCcCeEEECCCCCeEEEEE
Confidence            00 000 00112236788998888876543211    1124799999999988777753 23588999999999 67776


Q ss_pred             e-CCC-EEEEEcCCCceecc
Q psy7108         270 T-TEG-VHIYSLDSGYVFDP  287 (703)
Q Consensus       270 s-~Dg-v~iwd~~~~~~~~~  287 (703)
                      . .++ |.++|..+++....
T Consensus       337 ~~~~~~V~ViD~~t~~vv~~  356 (373)
T 2mad_H          337 SAGTEVLHIYDAGAGDQDQS  356 (373)
T ss_pred             cCCCCeEEEEECCCCCEEee
Confidence            6 366 99999999887654

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=99.10  E-value=4.3e-11  Score=139.64  Aligned_cols=201  Identities=13%  Similarity=0.066  Sum_probs=114.6

Q ss_pred             CCCc-CeEEEEEc-CCCCCCEEEEEeC-CC----cEEEEEcCCC-ceeEEEecCCCcEEEEEEecCCCEEEEEECC----
Q psy7108          45 GHEG-PVSCIEFS-PVLSSTGMVSASW-DK----TVKLWNAVET-DTQHETIQLLSDALCVAYKPDGTEIVVATLD----  112 (703)
Q Consensus        45 gH~~-~V~~l~~s-p~~dg~~L~sgs~-Dg----~V~iWd~~~~-~~~~~~~~~~~~V~~v~~spdg~~las~s~d----  112 (703)
                      +|.- .+...+|| |  ||++||.+.. +|    +|+++|+.++ +.+.....  ....+++|+|||+.|+....|    
T Consensus       170 ~~~~~~~~~~~~S~P--DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~--~~~~~~~WspDg~~l~y~~~d~~~~  245 (751)
T 2xe4_A          170 GKAFCDVMEVKPAPP--EHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS--GTNGEIVWGPDHTSLFYVTKDETLR  245 (751)
T ss_dssp             TCSCCEEEEEEECTT--TTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE--EECSCCEECSSTTEEEEEEECTTCC
T ss_pred             CCCeEEEeeeEecCC--CCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc--CceeeEEEecCCCEEEEEEECCCCC
Confidence            4443 68889999 9  9998886533 33    4999999887 52211111  112468899999988887765    


Q ss_pred             -CeEEEEEcCCCcE--EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec---CCcEEEEECCCCc
Q psy7108         113 -GQLIMFDVESAAQ--VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ---SKYICIYSSREGI  186 (703)
Q Consensus       113 -g~I~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~---dg~I~lwD~~~~~  186 (703)
                       ..|+.+++.+++.  ...+....                   ......+.|+|||++|+..+.   ...|.++|+.++.
T Consensus       246 ~~~v~~~~lgt~~~~~~lv~~~~~-------------------~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~  306 (751)
T 2xe4_A          246 ENKVWRHVMGKLQSEDVCLYEEHN-------------------PLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGN  306 (751)
T ss_dssp             EEEEEEEETTSCGGGCEEEEECCC-------------------TTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCT
T ss_pred             CCEEEEEECCCCchhcEEEEecCC-------------------CceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCC
Confidence             2588888877642  22332211                   114567899999999887653   3458889988752


Q ss_pred             -eE--EEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcccee-ecCCcc--ceEEEEEc
Q psy7108         187 -LL--KKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAAR-VLKPEV--RVFCVKFS  260 (703)
Q Consensus       187 -~~--~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~-~~~h~~--~V~~l~~s  260 (703)
                       ..  +.+..       .......++.|+. |+.+++.+..+ ..+...|..+|+.++..... +..+..  .+.++.+.
T Consensus       307 ~~~~~~~l~~-------~~~~~~~s~~~~~-g~~l~~~t~~~-~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~  377 (751)
T 2xe4_A          307 AHNTLEIVRP-------REKGVRYDVQMHG-TSHLVILTNEG-GAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR  377 (751)
T ss_dssp             TCCCEEESSC-------CCTTCCEEEEEET-TTEEEEEECTT-TCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC
T ss_pred             CCceeEEeec-------CCCCceEEEeeee-CCEEEEEeCCC-CCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE
Confidence             11  22211       0111223333332 66655554432 12334677777765322222 333333  45555554


Q ss_pred             CCCCEE-EEEeCCC---EEEEEc
Q psy7108         261 PTGQAW-VAATTEG---VHIYSL  279 (703)
Q Consensus       261 pdg~~l-~s~s~Dg---v~iwd~  279 (703)
                        ++.| ++...++   +.++++
T Consensus       378 --~~~lv~~~~~~g~~~l~~~dl  398 (751)
T 2xe4_A          378 --SNYLVVAGRRAGLTRIWTMMA  398 (751)
T ss_dssp             --SSEEEEEEEETTEEEEEEEEC
T ss_pred             --CCEEEEEEEeCCEEEEEEEec
Confidence              4555 6666677   556665

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.10  E-value=1.4e-08  Score=109.54  Aligned_cols=208  Identities=8%  Similarity=-0.014  Sum_probs=134.1

Q ss_pred             cCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCC--eEEEEEcCCCcE
Q psy7108          48 GPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDG--QLIMFDVESAAQ  125 (703)
Q Consensus        48 ~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg--~I~vwd~~~~~~  125 (703)
                      .....++|+|  +++++++...++.|++||..++. +..+........ ++|+|+++.|+++..++  .|.+++..++..
T Consensus       131 ~~P~~la~d~--~g~lyv~d~~~~~I~~id~~~g~-~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~  206 (409)
T 3hrp_A          131 KYMWGIAAVG--NNTVLAYQRDDPRVRLISVDDNK-VTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA  206 (409)
T ss_dssp             CCEEEEEECS--TTEEEEEETTTTEEEEEETTTTE-EEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC
T ss_pred             CCceEEEEeC--CCCEEEEecCCCcEEEEECCCCE-EEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCce
Confidence            4678999999  99988888888999999997764 444443333344 99999999998888766  799999876654


Q ss_pred             EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCcccccccc
Q psy7108         126 VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDF  205 (703)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~  205 (703)
                      ...+.....                .....+.+++++|++..|+++..++.|+.||..++.. ..+.........+ ..+
T Consensus       207 ~~~~g~~~~----------------~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~-~~~~~~~~~g~~~-~~P  268 (409)
T 3hrp_A          207 PTRIGQLGS----------------TFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEV-TLIKQLELSGSLG-TNP  268 (409)
T ss_dssp             EEEEEECCT----------------TSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCE-EEEEECCCCSCCC-CSS
T ss_pred             eEEeeeccc----------------hhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCE-EEEecccccCCCC-CCc
Confidence            433311000                0112567899999655666677788999999987753 2332111100001 001


Q ss_pred             ceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCC---------------ccceEEEEEcCCCCEEEEEe
Q psy7108         206 INRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKP---------------EVRVFCVKFSPTGQAWVAAT  270 (703)
Q Consensus       206 v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h---------------~~~V~~l~~spdg~~l~s~s  270 (703)
                      ...++++|++..++++....     ..|+.|+....  ...+.++               -.....++++|+|+.+++-+
T Consensus       269 ~~~ia~~p~~g~lyv~d~~~-----~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~  341 (409)
T 3hrp_A          269 GPYLIYYFVDSNFYMSDQNL-----SSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDG  341 (409)
T ss_dssp             CCEEEEETTTTEEEEEETTT-----TEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEET
T ss_pred             cccEEEeCCCCEEEEEeCCC-----CEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeC
Confidence            13899999655555543321     37888886543  2222221               13478999999999666666


Q ss_pred             -CCC-EEEEEcCCCce
Q psy7108         271 -TEG-VHIYSLDSGYV  284 (703)
Q Consensus       271 -~Dg-v~iwd~~~~~~  284 (703)
                       .++ |+.|+..++..
T Consensus       342 ~~~~~I~~~~~~~G~v  357 (409)
T 3hrp_A          342 FKGYCLRKLDILDGYV  357 (409)
T ss_dssp             TTTCEEEEEETTTTEE
T ss_pred             CCCCEEEEEECCCCEE
Confidence             566 99999777654

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.08  E-value=2.4e-09  Score=123.98  Aligned_cols=198  Identities=11%  Similarity=0.018  Sum_probs=125.2

Q ss_pred             EEEEEcCCCCCCEEEEEeCCCc-------------EEEEEcCCCcee-EEEe---cCCCcEEEEEEecCCCEEEEEECCC
Q psy7108          51 SCIEFSPVLSSTGMVSASWDKT-------------VKLWNAVETDTQ-HETI---QLLSDALCVAYKPDGTEIVVATLDG  113 (703)
Q Consensus        51 ~~l~~sp~~dg~~L~sgs~Dg~-------------V~iWd~~~~~~~-~~~~---~~~~~V~~v~~spdg~~las~s~dg  113 (703)
                      .+++|+|  ||+.|+.++.|..             |++|++.++... ..+.   .+...+.++.|+|||++|+.++.++
T Consensus       171 ~~~~wsp--Dg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~  248 (695)
T 2bkl_A          171 ATPKWTP--DSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRG  248 (695)
T ss_dssp             CCCEECT--TSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEET
T ss_pred             cceEEec--CCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCC
Confidence            6899999  9999999998876             999999877522 2222   2445788999999999998887666


Q ss_pred             ----eEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe---cCCcEEEEECCCCc
Q psy7108         114 ----QLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG---QSKYICIYSSREGI  186 (703)
Q Consensus       114 ----~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s---~dg~I~lwD~~~~~  186 (703)
                          .|++||..+++... +..+..                    .+....+ ++|++++.+.   .++.|.+||+.++.
T Consensus       249 ~~~~~l~~~~~~~~~~~~-l~~~~~--------------------~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~  306 (695)
T 2bkl_A          249 WSENDVYWKRPGEKDFRL-LVKGVG--------------------AKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPA  306 (695)
T ss_dssp             TTEEEEEEECTTCSSCEE-EEECSS--------------------CCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCS
T ss_pred             CCceEEEEEcCCCCceEE-eecCCC--------------------ceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCC
Confidence                67777766555433 333222                    3444555 5666434433   25789999998765


Q ss_pred             e--EEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCC-ccceEEEEEcCCC
Q psy7108         187 L--LKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKP-EVRVFCVKFSPTG  263 (703)
Q Consensus       187 ~--~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h-~~~V~~l~~spdg  263 (703)
                      .  ...+..+..      ...+..++++ ++..++....++    ...+.+++.. ++....+..+ ...+..++++|++
T Consensus       307 ~~~~~~l~~~~~------~~~l~~~~~~-~~~lv~~~~~dg----~~~l~~~~~~-g~~~~~l~~~~~~~v~~~~~s~d~  374 (695)
T 2bkl_A          307 RASWKEIVPEDS------SASLLSVSIV-GGHLSLEYLKDA----TSEVRVATLK-GKPVRTVQLPGVGAASNLMGLEDL  374 (695)
T ss_dssp             GGGCEEEECCCS------SCEEEEEEEE-TTEEEEEEEETT----EEEEEEEETT-CCEEEECCCSSSSEECCCBSCTTC
T ss_pred             ccCCeEEecCCC------CCeEEEEEEE-CCEEEEEEEECC----EEEEEEEeCC-CCeeEEecCCCCeEEEEeecCCCC
Confidence            3  223322210      1256677777 455444444332    2344444543 4444444444 5678888999999


Q ss_pred             CEEEE-EeC---CC-EEEEEcCCCce
Q psy7108         264 QAWVA-ATT---EG-VHIYSLDSGYV  284 (703)
Q Consensus       264 ~~l~s-~s~---Dg-v~iwd~~~~~~  284 (703)
                      +.++. .+.   .+ +++||+.+++.
T Consensus       375 ~~l~~~~ss~~~P~~v~~~d~~~g~~  400 (695)
T 2bkl_A          375 DDAYYVFTSFTTPRQIYKTSVSTGKS  400 (695)
T ss_dssp             SEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred             CEEEEEEcCCCCCCEEEEEECCCCcE
Confidence            87753 322   34 88999988763

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.08  E-value=1.4e-08  Score=107.65  Aligned_cols=215  Identities=9%  Similarity=0.066  Sum_probs=138.3

Q ss_pred             ceeec-cCCCccccccccC------CCcCeEEEEEcCCCCCCEEEEEeC--CCcEEEEEcCCCceeEEEecCCCcEEEEE
Q psy7108          28 VKKGD-MAARVLKPEVLSG------HEGPVSCIEFSPVLSSTGMVSASW--DKTVKLWNAVETDTQHETIQLLSDALCVA   98 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l~g------H~~~V~~l~~sp~~dg~~L~sgs~--Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~   98 (703)
                      +..|| .+++.+  ..+..      +......++++|  ||++|++++.  +++|.+||+.+++....+....+ ...+.
T Consensus        83 v~v~d~~t~~~~--~~i~~~~~~~~~g~~p~~i~~sp--dg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~-~~~v~  157 (361)
T 2oiz_A           83 VEVWDADKLTFE--KEISLPPKRVQGLNYDGLFRQTT--DGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAG-CWSVI  157 (361)
T ss_dssp             EEEEETTTCCEE--EEEEECTTBCCBCCCGGGEEECT--TSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTT-EEEEE
T ss_pred             EEEEECcCCcEE--EEEEcCccccccCCCcceEEECC--CCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCC-cceeE
Confidence            45565 355665  55442      224567899999  9999998864  58999999998854443144432 23356


Q ss_pred             EecCC-CEEEEEECCCeEEEEEcCC-CcEEEEEeccccCCCCCCC--------C----------ccchhhc---------
Q psy7108          99 YKPDG-TEIVVATLDGQLIMFDVES-AAQVGSVEARRDLDSGRLD--------T----------DLVTREQ---------  149 (703)
Q Consensus        99 ~spdg-~~las~s~dg~I~vwd~~~-~~~~~~~~~~~~~~~~~~~--------~----------~~~~~~~---------  149 (703)
                      +.|++ ..+++.+.||.+.+|+.+. ++..........+..+...        .          .......         
T Consensus       158 ~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~  237 (361)
T 2oiz_A          158 PQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDG  237 (361)
T ss_dssp             ECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEE
T ss_pred             EcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecc
Confidence            67766 5677778888888888765 4443222100000000000        0          0000000         


Q ss_pred             --------ccC----CccEEEEEEcCCCCEEEEEec-----------CCcEEEEECCCCceEEEEEeccCCccccccccc
Q psy7108         150 --------SLK----AKAVSTVCYSADGSCILAAGQ-----------SKYICIYSSREGILLKKFTITQNKSLDGINDFI  206 (703)
Q Consensus       150 --------~~~----~~~V~~i~~spdg~~l~s~s~-----------dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v  206 (703)
                              ..+    ......++|+||++.++++..           ++.|.+||+.+++.+.++..+         . .
T Consensus       238 ~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~---------~-p  307 (361)
T 2oiz_A          238 PWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGR---------D-A  307 (361)
T ss_dssp             EEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECT---------T-C
T ss_pred             cccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecC---------C-e
Confidence                    000    001112689999888887643           347999999999998887632         1 6


Q ss_pred             eeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC--ccceeecCCccceEEEEEcCCCC
Q psy7108         207 NRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG--DMAARVLKPEVRVFCVKFSPTGQ  264 (703)
Q Consensus       207 ~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~--~~~~~~~~h~~~V~~l~~spdg~  264 (703)
                      ..++|+|||+++++++. +      .|.+||..++  +.+..+.........++++|+|+
T Consensus       308 ~~ia~spdg~~l~v~n~-~------~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~  360 (361)
T 2oiz_A          308 LSMTIDQQRNLMLTLDG-G------NVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG  360 (361)
T ss_dssp             CEEEEETTTTEEEEECS-S------CEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred             eEEEECCCCCEEEEeCC-C------eEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence            78999999998887664 2      7999999999  88877766777788999999986

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.06  E-value=2.9e-08  Score=102.12  Aligned_cols=215  Identities=11%  Similarity=0.116  Sum_probs=140.3

Q ss_pred             ceeec-cCCCcccccccc----CCCcCeEEEEEcCCCC-CCEEEEEeCCCcEEEEEcCCCceeEEE-ec-----CCCcEE
Q psy7108          28 VKKGD-MAARVLKPEVLS----GHEGPVSCIEFSPVLS-STGMVSASWDKTVKLWNAVETDTQHET-IQ-----LLSDAL   95 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l~----gH~~~V~~l~~sp~~d-g~~L~sgs~Dg~V~iWd~~~~~~~~~~-~~-----~~~~V~   95 (703)
                      +..|+ .+++..  ....    ++...+.++++++  + ++++++.. ++.|.+||.. ++ .... ..     ....+.
T Consensus        48 i~~~d~~~g~~~--~~~~~~~~~~~~~~~~i~~~~--~~g~l~v~~~-~~~l~~~d~~-g~-~~~~~~~~~~~~~~~~~~  120 (314)
T 1pjx_A           48 ILRIDLKTGKKT--VICKPEVNGYGGIPAGCQCDR--DANQLFVADM-RLGLLVVQTD-GT-FEEIAKKDSEGRRMQGCN  120 (314)
T ss_dssp             EEEECTTTCCEE--EEECCEETTEECCEEEEEECS--SSSEEEEEET-TTEEEEEETT-SC-EEECCSBCTTSCBCBCCC
T ss_pred             EEEEeCCCCcEE--EEEecccCCCCCCCceEEEec--CCCcEEEEEC-CCCEEEEeCC-CC-EEEEEeccCCCccccCCc
Confidence            55566 355543  2211    2557799999999  8 66555554 4478899987 53 3333 22     123478


Q ss_pred             EEEEecCCCEEEEEECC---------------CeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEE
Q psy7108          96 CVAYKPDGTEIVVATLD---------------GQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVC  160 (703)
Q Consensus        96 ~v~~spdg~~las~s~d---------------g~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~  160 (703)
                      +++++++|+.+++...+               +.|..||.+ ++.........                     ....++
T Consensus       121 ~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~---------------------~~~~i~  178 (314)
T 1pjx_A          121 DCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQ---------------------FPNGIA  178 (314)
T ss_dssp             EEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEES---------------------SEEEEE
T ss_pred             CEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCC---------------------CcceEE
Confidence            99999999887776554               567777765 55433322211                     467889


Q ss_pred             Ec----CCCCEEEEE-ecCCcEEEEECC-CCceEE--EEEeccCCcccccc-ccceeeeeccCCCEEEEEcccCCCCCee
Q psy7108         161 YS----ADGSCILAA-GQSKYICIYSSR-EGILLK--KFTITQNKSLDGIN-DFINRRKMTEFGNVSLIETRETHEGGNV  231 (703)
Q Consensus       161 ~s----pdg~~l~s~-s~dg~I~lwD~~-~~~~~~--~~~~~~~~~~~~~~-~~v~~~~~spdg~~l~~~~~~~~~~~~~  231 (703)
                      |+    |+++.+.++ ..++.|.+||+. +++...  .+..     ..... .....++++++|+..++....      .
T Consensus       179 ~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~-----~~~~~~~~p~~i~~d~~G~l~v~~~~~------~  247 (314)
T 1pjx_A          179 VRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGH-----IPGTHEGGADGMDFDEDNNLLVANWGS------S  247 (314)
T ss_dssp             EEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEE-----CCCCSSCEEEEEEEBTTCCEEEEEETT------T
T ss_pred             EecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEE-----CCCCCCCCCCceEECCCCCEEEEEcCC------C
Confidence            99    999766555 567889999986 443211  1111     11111 246778999999876665433      2


Q ss_pred             EEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeC-CC-EEEEEcCCC
Q psy7108         232 VLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATT-EG-VHIYSLDSG  282 (703)
Q Consensus       232 ~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~-Dg-v~iwd~~~~  282 (703)
                      .|.+||..+++....+..+...+.+++|+|+|+.|..++. ++ |..|++...
T Consensus       248 ~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~  300 (314)
T 1pjx_A          248 HIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN  300 (314)
T ss_dssp             EEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred             EEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence            6899998877776666666678999999999996655544 45 999998653

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.04  E-value=7.3e-08  Score=98.93  Aligned_cols=203  Identities=10%  Similarity=0.019  Sum_probs=130.2

Q ss_pred             ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecC-----CCcEEEEEEecC
Q psy7108          28 VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQL-----LSDALCVAYKPD  102 (703)
Q Consensus        28 v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~-----~~~V~~v~~spd  102 (703)
                      +..||..+...  ..+. +...+.+++++|  +|+++++.  ++.|.+||..+++ ...+...     ...+.+++++|+
T Consensus        37 i~~~d~~~~~~--~~~~-~~~~~~~i~~~~--dG~l~v~~--~~~l~~~d~~~g~-~~~~~~~~~~~~~~~~~di~~d~d  108 (297)
T 3g4e_A           37 VCRWDSFTKQV--QRVT-MDAPVSSVALRQ--SGGYVATI--GTKFCALNWKEQS-AVVLATVDNDKKNNRFNDGKVDPA  108 (297)
T ss_dssp             EEEEETTTCCE--EEEE-CSSCEEEEEEBT--TSSEEEEE--TTEEEEEETTTTE-EEEEEECCTTCSSEEEEEEEECTT
T ss_pred             EEEEECCCCcE--EEEe-CCCceEEEEECC--CCCEEEEE--CCeEEEEECCCCc-EEEEEecCCCCCCCCCCCEEECCC
Confidence            33455444333  3332 456799999999  99966554  5679999987764 3333222     234788999999


Q ss_pred             CCEEEEEECC---------CeEEEEEcCC-CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEE-
Q psy7108         103 GTEIVVATLD---------GQLIMFDVES-AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAA-  171 (703)
Q Consensus       103 g~~las~s~d---------g~I~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~-  171 (703)
                      |+++++...+         ..-.+|.++. ++....... ..                    ....++|+||++.|+.+ 
T Consensus       109 G~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~-~~--------------------~pngi~~spdg~~lyv~~  167 (297)
T 3g4e_A          109 GRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQ-VD--------------------ISNGLDWSLDHKIFYYID  167 (297)
T ss_dssp             SCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEE-ES--------------------BEEEEEECTTSCEEEEEE
T ss_pred             CCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeec-cc--------------------cccceEEcCCCCEEEEec
Confidence            9966654322         2334554443 333222222 11                    46789999999977554 


Q ss_pred             ecCCcEEEEEC--CCCceE--EEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceee
Q psy7108         172 GQSKYICIYSS--REGILL--KKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARV  247 (703)
Q Consensus       172 s~dg~I~lwD~--~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~  247 (703)
                      +.++.|..||+  .++...  +.+...     .........++++++|+..++....      ..|..||..+++....+
T Consensus       168 ~~~~~i~~~~~d~~~G~~~~~~~~~~~-----~~~~~~p~g~~~d~~G~lwva~~~~------~~v~~~d~~tG~~~~~i  236 (297)
T 3g4e_A          168 SLSYSVDAFDYDLQTGQISNRRSVYKL-----EKEEQIPDGMCIDAEGKLWVACYNG------GRVIRLDPVTGKRLQTV  236 (297)
T ss_dssp             GGGTEEEEEEECTTTCCEEEEEEEEEC-----CGGGCEEEEEEEBTTSCEEEEEETT------TEEEEECTTTCCEEEEE
T ss_pred             CCCCcEEEEeccCCCCcccCcEEEEEC-----CCCCCCCCeeEECCCCCEEEEEcCC------CEEEEEcCCCceEEEEE
Confidence            55788999997  456432  112110     1112356778999999765554433      26999999989888888


Q ss_pred             cCCccceEEEEEc-CCCCEEEEEe
Q psy7108         248 LKPEVRVFCVKFS-PTGQAWVAAT  270 (703)
Q Consensus       248 ~~h~~~V~~l~~s-pdg~~l~s~s  270 (703)
                      ..+...+++++|. |+++.|..++
T Consensus       237 ~~p~~~~t~~~f~g~d~~~L~vt~  260 (297)
T 3g4e_A          237 KLPVDKTTSCCFGGKNYSEMYVTC  260 (297)
T ss_dssp             ECSSSBEEEEEEESGGGCEEEEEE
T ss_pred             ECCCCCceEEEEeCCCCCEEEEEc
Confidence            7777789999998 8988775544

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.02  E-value=7.4e-09  Score=120.73  Aligned_cols=234  Identities=10%  Similarity=0.035  Sum_probs=139.1

Q ss_pred             EeeecccCCceEEecC-------Cceeecc-CCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCc----------
Q psy7108          11 ETRETHEGGNVVLKLP-------GVKKGDM-AARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKT----------   72 (703)
Q Consensus        11 ~~~~~~~~~~~~i~~~-------~v~~~d~-tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~----------   72 (703)
                      ...+..+|...++...       .+.+||. +|+.+  . ...+...+..++|+|  | +.|+.++.|+.          
T Consensus       167 ~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~--~-~~~~~~~~~~~~wsp--D-~~l~~~~~~~~~~~~~~~~~~  240 (741)
T 1yr2_A          167 AWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPL--A-DELKWVKFSGLAWLG--N-DALLYSRFAEPKEGQAFQALN  240 (741)
T ss_dssp             EEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEE--E-EEEEEEESCCCEEST--T-SEEEEEECCCC--------CC
T ss_pred             eEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCC--C-ccCCCceeccEEEEC--C-CEEEEEEecCcccccccccCC
Confidence            3344445554444432       2566674 44443  2 222222236789999  9 99988877654          


Q ss_pred             ----EEEEEcCCCcee-EEEec---CCCcEEEEEEecCCCEEEEEECCC-----eEEEEEcCCC--cEEEEEeccccCCC
Q psy7108          73 ----VKLWNAVETDTQ-HETIQ---LLSDALCVAYKPDGTEIVVATLDG-----QLIMFDVESA--AQVGSVEARRDLDS  137 (703)
Q Consensus        73 ----V~iWd~~~~~~~-~~~~~---~~~~V~~v~~spdg~~las~s~dg-----~I~vwd~~~~--~~~~~~~~~~~~~~  137 (703)
                          |++|++.++... ..+..   +...+.++.|||||++|+..+.++     .|++||+.++  +....+..+..   
T Consensus       241 ~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~---  317 (741)
T 1yr2_A          241 YNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLK---  317 (741)
T ss_dssp             CCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSS---
T ss_pred             CCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCC---
Confidence                889998776521 22222   223588999999999998877554     8999999877  31334433322   


Q ss_pred             CCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC----CcEEEEECCCCc-eEEEEEeccCCccccccccceeeeec
Q psy7108         138 GRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS----KYICIYSSREGI-LLKKFTITQNKSLDGINDFINRRKMT  212 (703)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d----g~I~lwD~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~s  212 (703)
                                       .+... ++|+|+.|+..+.+    +.|.+||+.++. ....+..+.       ...+..++++
T Consensus       318 -----------------~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~-------~~~l~~~~~~  372 (741)
T 1yr2_A          318 -----------------AQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPES-------KDNLESVGIA  372 (741)
T ss_dssp             -----------------SCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCC-------SSEEEEEEEE
T ss_pred             -----------------ceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCC-------CCeEEEEEEE
Confidence                             23333 34889988887653    459999998752 333332221       1245556666


Q ss_pred             cCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC-CccceEEEEEcCCCCEEE-EEeC---CC-EEEEEcCCCce
Q psy7108         213 EFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK-PEVRVFCVKFSPTGQAWV-AATT---EG-VHIYSLDSGYV  284 (703)
Q Consensus       213 pdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~-h~~~V~~l~~spdg~~l~-s~s~---Dg-v~iwd~~~~~~  284 (703)
                       ++..++....+    +...|.+++.. ++....+.. +...+..++++|+++.++ +.+.   .+ +.+||+.+++.
T Consensus       373 -~~~lv~~~~~d----g~~~l~~~~~~-g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~  444 (741)
T 1yr2_A          373 -GNRLFASYIHD----AKSQVLAFDLD-GKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKT  444 (741)
T ss_dssp             -BTEEEEEEEET----TEEEEEEEETT-SCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEE
T ss_pred             -CCEEEEEEEEC----CEEEEEEEeCC-CCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence             34444443332    22345555653 444444443 356788999999998664 3332   24 88999988763

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=99.02  E-value=1.8e-08  Score=104.00  Aligned_cols=225  Identities=10%  Similarity=0.061  Sum_probs=144.1

Q ss_pred             ccccCCCcCeEEEEEcCCCCCC-EEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEE
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSST-GMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFD  119 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~-~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd  119 (703)
                      +.+..+.....+..|+|  +++ ++++...++.|..|+. +++ ..........+..++++++|+++++...++.|.+||
T Consensus        38 ~~l~~~~~~~egp~~~~--~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~  113 (305)
T 3dr2_A           38 LTLYDQATWSEGPAWWE--AQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSD  113 (305)
T ss_dssp             EEEECCCSSEEEEEEEG--GGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred             EEEecCCcCccCCeEeC--CCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEEC
Confidence            56666677788999999  888 6677778889999997 443 444455667789999999999766655568899999


Q ss_pred             cCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEE----Eec-------------CCcEEEEEC
Q psy7108         120 VESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILA----AGQ-------------SKYICIYSS  182 (703)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s----~s~-------------dg~I~lwD~  182 (703)
                      .+ ++.. .+.....               ......+..++++|+|+..++    |..             .+.|..+|.
T Consensus       114 ~~-g~~~-~~~~~~~---------------~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~  176 (305)
T 3dr2_A          114 AD-GQAH-LLVGRYA---------------GKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPP  176 (305)
T ss_dssp             TT-SCEE-EEECEET---------------TEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECS
T ss_pred             CC-CCEE-EEEeccC---------------CCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcC
Confidence            86 5533 2221110               000124567999999998876    332             256888888


Q ss_pred             CCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccc--eee-cCCccceEEEEE
Q psy7108         183 REGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMA--ARV-LKPEVRVFCVKF  259 (703)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~--~~~-~~h~~~V~~l~~  259 (703)
                      .+++.....  ..        ...+.++|+||++.++++.......+...|..|++..+...  ..+ ......+..+++
T Consensus       177 ~~g~~~~~~--~~--------~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~  246 (305)
T 3dr2_A          177 DGSPLQRMA--DL--------DHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCV  246 (305)
T ss_dssp             SSCCCEEEE--EE--------SSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEE
T ss_pred             CCCcEEEEe--cC--------CCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEE
Confidence            776654332  11        14567999999997777654311111236888887654311  111 112334567899


Q ss_pred             cCCCCEEEEEeCCCEEEEEcCCCceecce-----eeeEEEccch
Q psy7108         260 SPTGQAWVAATTEGVHIYSLDSGYVFDPF-----LLDISITPQS  298 (703)
Q Consensus       260 spdg~~l~s~s~Dgv~iwd~~~~~~~~~~-----~~~~~~spd~  298 (703)
                      +++|+..+ ++.++|.+|+.+ ++.+..+     ...++|++++
T Consensus       247 d~~G~lwv-~~~~gv~~~~~~-g~~~~~~~~~~~~~~~~f~~d~  288 (305)
T 3dr2_A          247 DRGGWLWS-SSGTGVCVFDSD-GQLLGHIPTPGTASNCTFDQAQ  288 (305)
T ss_dssp             CTTSCEEE-CCSSEEEEECTT-SCEEEEEECSSCCCEEEECTTS
T ss_pred             CCCCCEEE-ecCCcEEEECCC-CCEEEEEECCCceeEEEEeCCC
Confidence            99999544 445669999984 5444333     2457777766

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.02  E-value=3.9e-07  Score=92.66  Aligned_cols=243  Identities=9%  Similarity=0.086  Sum_probs=156.3

Q ss_pred             cccCCceEEecC--CceeeccCCCccccc-cccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEec-C
Q psy7108          15 THEGGNVVLKLP--GVKKGDMAARVLKPE-VLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQ-L   90 (703)
Q Consensus        15 ~~~~~~~~i~~~--~v~~~d~tg~~~~~~-~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~-~   90 (703)
                      ...|..++....  .+..++..++..  . .+..+...+.++++++  ++.++++...++.|..+|.. +........ .
T Consensus        28 d~~g~l~v~~~~~~~v~~~~~~~~~~--~~~~~~~~~~~~~i~~~~--~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~  102 (300)
T 2qc5_A           28 SEDGKVWFTQHKANKISSLDQSGRIK--EFEVPTPDAKVMCLIVSS--LGDIWFTENGANKIGKLSKK-GGFTEYPLPQP  102 (300)
T ss_dssp             CTTSCEEEEETTTTEEEEECTTSCEE--EEECSSTTCCEEEEEECT--TSCEEEEETTTTEEEEECTT-SCEEEEECSST
T ss_pred             CCCCCEEEEcCCCCeEEEECCCCceE--EEECCCCCCcceeEEECC--CCCEEEEecCCCeEEEECCC-CCeEEecCCCC
Confidence            344444444332  255566555543  2 2233446789999999  89988887777889999976 433221111 3


Q ss_pred             CCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEE
Q psy7108          91 LSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILA  170 (703)
Q Consensus        91 ~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s  170 (703)
                      ...+.++++.++|+.+++...++.|..+|.+ ++... +....                  ....+..++++++|+..++
T Consensus       103 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~-~~~~~------------------~~~~~~~i~~d~~g~l~v~  162 (300)
T 2qc5_A          103 DSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYE-YDLPN------------------KGSYPAFITLGSDNALWFT  162 (300)
T ss_dssp             TCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEE-EECSS------------------TTCCEEEEEECTTSSEEEE
T ss_pred             CCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEE-ccCCC------------------CCCCceeEEECCCCCEEEE
Confidence            4678999999999887777668899999987 55442 22110                  1226789999999997666


Q ss_pred             EecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcccee-ecC
Q psy7108         171 AGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAAR-VLK  249 (703)
Q Consensus       171 ~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~-~~~  249 (703)
                      ...++.|..+|. +++... +....      ....+..++++++|...++....      ..|..+|. +++.... ...
T Consensus       163 ~~~~~~i~~~~~-~g~~~~-~~~~~------~~~~~~~i~~d~~g~l~v~~~~~------~~i~~~~~-~g~~~~~~~~~  227 (300)
T 2qc5_A          163 ENQNNSIGRITN-TGKLEE-YPLPT------NAAAPVGITSGNDGALWFVEIMG------NKIGRITT-TGEISEYDIPT  227 (300)
T ss_dssp             ETTTTEEEEECT-TCCEEE-EECSS------TTCCEEEEEECTTSSEEEEETTT------TEEEEECT-TCCEEEEECSS
T ss_pred             ecCCCeEEEECC-CCcEEE-eeCCC------CCCCcceEEECCCCCEEEEccCC------CEEEEEcC-CCcEEEEECCC
Confidence            666788999998 555433 32211      12356789999999866665443      26888887 4443322 223


Q ss_pred             CccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceec-------ceeeeEEEccch
Q psy7108         250 PEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFD-------PFLLDISITPQS  298 (703)
Q Consensus       250 h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~-------~~~~~~~~spd~  298 (703)
                      +...+.+++++++|+.+++...++ |..|+.. ++...       .....+.+++++
T Consensus       228 ~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g  283 (300)
T 2qc5_A          228 PNARPHAITAGKNSEIWFTEWGANQIGRITND-NTIQEYQLQTENAEPHGITFGKDG  283 (300)
T ss_dssp             TTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECCSTTCCCCCEEECTTS
T ss_pred             CCCCceEEEECCCCCEEEeccCCCeEEEECCC-CcEEEEECCccCCccceeEeCCCC
Confidence            456688999999998666665556 9999873 43221       112456777777

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=98.97  E-value=2.7e-07  Score=96.11  Aligned_cols=211  Identities=14%  Similarity=0.111  Sum_probs=134.6

Q ss_pred             CeEEEEEcCCCCC-CEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEE
Q psy7108          49 PVSCIEFSPVLSS-TGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVG  127 (703)
Q Consensus        49 ~V~~l~~sp~~dg-~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~  127 (703)
                      -..+.+|+|  ++ .++++...++.|..||..++.. . .......+.+++|+|+|+++++.  +..|.+||.++++...
T Consensus        50 ~~egp~~~~--~~~~l~~~d~~~~~i~~~d~~~~~~-~-~~~~~~~v~~i~~~~dg~l~v~~--~~gl~~~d~~~g~~~~  123 (326)
T 2ghs_A           50 LGEGPTFDP--ASGTAWWFNILERELHELHLASGRK-T-VHALPFMGSALAKISDSKQLIAS--DDGLFLRDTATGVLTL  123 (326)
T ss_dssp             BEEEEEEET--TTTEEEEEEGGGTEEEEEETTTTEE-E-EEECSSCEEEEEEEETTEEEEEE--TTEEEEEETTTCCEEE
T ss_pred             CCcCCeEeC--CCCEEEEEECCCCEEEEEECCCCcE-E-EEECCCcceEEEEeCCCeEEEEE--CCCEEEEECCCCcEEE
Confidence            456789999  64 5566666788999999877642 2 23445689999999999877654  3459999998887543


Q ss_pred             EEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec------CCcEEEEECCCCceEEEEEeccCCcccc
Q psy7108         128 SVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ------SKYICIYSSREGILLKKFTITQNKSLDG  201 (703)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~------dg~I~lwD~~~~~~~~~~~~~~~~~~~~  201 (703)
                      .......                .....+.+++++|+|+++++...      .+.|..+|  +++... +....      
T Consensus       124 ~~~~~~~----------------~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~~~~------  178 (326)
T 2ghs_A          124 HAELESD----------------LPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTK-LFADI------  178 (326)
T ss_dssp             EECSSTT----------------CTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEE-EEEEE------
T ss_pred             EeeCCCC----------------CCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEE-eeCCC------
Confidence            3221100                01225889999999997765542      24566666  454332 22111      


Q ss_pred             ccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC--CC-ccc-----eeecCCccceEEEEEcCCCCEEEEEeCCC
Q psy7108         202 INDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK--KG-DMA-----ARVLKPEVRVFCVKFSPTGQAWVAATTEG  273 (703)
Q Consensus       202 ~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~--~~-~~~-----~~~~~h~~~V~~l~~spdg~~l~s~s~Dg  273 (703)
                        ...+.++|+|+|+.++++....     ..|.+||..  ++ +..     ..+......+.+++++++|+.+++...++
T Consensus       179 --~~~~~i~~s~dg~~lyv~~~~~-----~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~  251 (326)
T 2ghs_A          179 --SIPNSICFSPDGTTGYFVDTKV-----NRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEG  251 (326)
T ss_dssp             --SSEEEEEECTTSCEEEEEETTT-----CEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTT
T ss_pred             --cccCCeEEcCCCCEEEEEECCC-----CEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCC
Confidence              1456799999999776654321     378888875  55 321     11222345678899999998777766556


Q ss_pred             -EEEEEcCCCceecce------eeeEEEc-cch
Q psy7108         274 -VHIYSLDSGYVFDPF------LLDISIT-PQS  298 (703)
Q Consensus       274 -v~iwd~~~~~~~~~~------~~~~~~s-pd~  298 (703)
                       |.+|+. +++....+      ..+++|+ +++
T Consensus       252 ~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~  283 (326)
T 2ghs_A          252 AVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDA  283 (326)
T ss_dssp             EEEEECT-TCCEEEEEECSCSBEEEEEEESTTS
T ss_pred             EEEEECC-CCCEEEEEECCCCCcEEEEEecCCC
Confidence             999998 45543332      2345665 544

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=98.95  E-value=1.5e-07  Score=100.04  Aligned_cols=248  Identities=8%  Similarity=-0.056  Sum_probs=145.3

Q ss_pred             EcCCCCCCEEEEEeC--CC---cEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEE----------CCCeEEEEE
Q psy7108          55 FSPVLSSTGMVSASW--DK---TVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVAT----------LDGQLIMFD  119 (703)
Q Consensus        55 ~sp~~dg~~L~sgs~--Dg---~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s----------~dg~I~vwd  119 (703)
                      ..|  ++.+++.+..  ..   +|.++|..+++....+..... . .++++|||+.++++.          .++.|.+||
T Consensus        28 ~~~--~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~-p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD  103 (373)
T 2mad_H           28 PGA--DGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFL-P-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFD  103 (373)
T ss_pred             CCC--CCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCC-C-CeEECCCCCEEEEEeccccccccCCCCCeEEEEE
Confidence            346  7787777653  22   789999988865444333333 3 999999999998886          367899999


Q ss_pred             cCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec--CCcEEEEECCCCceEEE-EEeccC
Q psy7108         120 VESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ--SKYICIYSSREGILLKK-FTITQN  196 (703)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~--dg~I~lwD~~~~~~~~~-~~~~~~  196 (703)
                      ..+.+.+..+.....   .          ..........++|+|||++|++++.  ++.|.++| .+++.+.+ +.....
T Consensus       104 ~~t~~~~~~i~~~~~---~----------~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~  169 (373)
T 2mad_H          104 PVTFLPIADIELPDA---P----------RFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTC  169 (373)
T ss_pred             CCCCcEEEEEECCCc---c----------ccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCce
Confidence            999888877654200   0          0000112357899999999999874  47899999 99988777 543221


Q ss_pred             CccccccccceeeeeccCCCEEEEEcccCCCC-------------------------C-------eeEEECCCCCCCcc-
Q psy7108         197 KSLDGINDFINRRKMTEFGNVSLIETRETHEG-------------------------G-------NVVLKLPGVKKGDM-  243 (703)
Q Consensus       197 ~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~-------------------------~-------~~~i~iwd~~~~~~-  243 (703)
                      ...... ..-.-+.++++|+.+++.. .+...                         +       ...+.+.|..+... 
T Consensus       170 ~~~~~~-~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~  247 (373)
T 2mad_H          170 YHIHPG-APSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGAT  247 (373)
T ss_pred             EEEEeC-CCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcce
Confidence            000000 0001134445555444433 21000                         0       01233333322210 


Q ss_pred             -ceeecC----------CccceEEEEEcCCCCEEEEEeC----------CC-EEEEEcCCCceeccee-----eeEEEcc
Q psy7108         244 -AARVLK----------PEVRVFCVKFSPTGQAWVAATT----------EG-VHIYSLDSGYVFDPFL-----LDISITP  296 (703)
Q Consensus       244 -~~~~~~----------h~~~V~~l~~spdg~~l~s~s~----------Dg-v~iwd~~~~~~~~~~~-----~~~~~sp  296 (703)
                       ...+.-          .......+.++||++.+.++..          .+ |.++|..+++....+.     ..+.|+|
T Consensus       248 v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~  327 (373)
T 2mad_H          248 NKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQ  327 (373)
T ss_pred             EeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECC
Confidence             011100          0112334788999988866543          23 8999999988866553     5799999


Q ss_pred             chhhhHhhcCC-cceEEEEEEecCchhHH
Q psy7108         297 QSVKEALADKD-YAKALMMSLKLNEQGLI  324 (703)
Q Consensus       297 d~~~~~l~sg~-~~~~l~la~~l~~~~~~  324 (703)
                      |+.. .+...+ .++.+.+ ++....+.+
T Consensus       328 Dg~~-~l~v~~~~~~~V~V-iD~~t~~vv  354 (373)
T 2mad_H          328 DGGP-DLYALSAGTEVLHI-YDAGAGDQD  354 (373)
T ss_pred             CCCe-EEEEEcCCCCeEEE-EECCCCCEE
Confidence            9932 344444 4677776 777655443

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=98.95  E-value=6.7e-08  Score=99.56  Aligned_cols=207  Identities=10%  Similarity=0.048  Sum_probs=136.6

Q ss_pred             ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecC-----CCcEEEEEEecC
Q psy7108          28 VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQL-----LSDALCVAYKPD  102 (703)
Q Consensus        28 v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~-----~~~V~~v~~spd  102 (703)
                      +..|+.+|+.   ..+..+...+.++++++  +|+++++...++.|.+|+.. +. ...+...     ...+.+++++|+
T Consensus        69 i~~~~~~g~~---~~~~~~~~~~~gl~~d~--dG~l~v~~~~~~~v~~~~~~-g~-~~~~~~~~~~~~~~~~~~i~~d~d  141 (305)
T 3dr2_A           69 VLGWREDGTV---DVLLDATAFTNGNAVDA--QQRLVHCEHGRRAITRSDAD-GQ-AHLLVGRYAGKRLNSPNDLIVARD  141 (305)
T ss_dssp             EEEEETTSCE---EEEEESCSCEEEEEECT--TSCEEEEETTTTEEEEECTT-SC-EEEEECEETTEECSCCCCEEECTT
T ss_pred             EEEEeCCCCE---EEEeCCCCccceeeECC--CCCEEEEECCCCEEEEECCC-CC-EEEEEeccCCCccCCCCCEEECCC
Confidence            3445666653   45556677899999999  99977766666789999975 43 3322221     134668999999


Q ss_pred             CCEEEE----EEC-------------CCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCC
Q psy7108         103 GTEIVV----ATL-------------DGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADG  165 (703)
Q Consensus       103 g~~las----~s~-------------dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg  165 (703)
                      |+..++    |..             .+.|..+|..+++..... . ..                    ....++|+||+
T Consensus       142 G~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~-~~--------------------~p~gl~~spdg  199 (305)
T 3dr2_A          142 GAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-D-LD--------------------HPNGLAFSPDE  199 (305)
T ss_dssp             SCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-E-ES--------------------SEEEEEECTTS
T ss_pred             CCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-c-CC--------------------CCcceEEcCCC
Confidence            998876    332             246788887666654333 2 11                    46789999999


Q ss_pred             CEEEEEecC------CcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC
Q psy7108         166 SCILAAGQS------KYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK  239 (703)
Q Consensus       166 ~~l~s~s~d------g~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~  239 (703)
                      +.|+++...      +.|..||+..+. +.........    .......++++++|+. .+++.+       .|.+|+. 
T Consensus       200 ~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~----~~~~pdgi~~d~~G~l-wv~~~~-------gv~~~~~-  265 (305)
T 3dr2_A          200 QTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASV----PDGLPDGFCVDRGGWL-WSSSGT-------GVCVFDS-  265 (305)
T ss_dssp             SEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECC----SSSCCCSEEECTTSCE-EECCSS-------EEEEECT-
T ss_pred             CEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEEC----CCCCCCeEEECCCCCE-EEecCC-------cEEEECC-
Confidence            988877654      689999987654 2211111000    1123456889999994 444432       4888987 


Q ss_pred             CCccceeecCCccceEEEEEcCCCCEEEEEeCCCEEEEE
Q psy7108         240 KGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYS  278 (703)
Q Consensus       240 ~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dgv~iwd  278 (703)
                      .++....+..+. .+.+++|+|+++.|..++.+++..++
T Consensus       266 ~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l~~~~  303 (305)
T 3dr2_A          266 DGQLLGHIPTPG-TASNCTFDQAQQRLFITGGPCLWMLP  303 (305)
T ss_dssp             TSCEEEEEECSS-CCCEEEECTTSCEEEEEETTEEEEEE
T ss_pred             CCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCeEEEEE
Confidence            466665555554 58899999999999888877755444

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=98.94  E-value=4e-08  Score=103.57  Aligned_cols=252  Identities=13%  Similarity=0.086  Sum_probs=159.5

Q ss_pred             eeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEe----------CCCcEEEEEcCCCceeEEEecCC------
Q psy7108          29 KKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSAS----------WDKTVKLWNAVETDTQHETIQLL------   91 (703)
Q Consensus        29 ~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs----------~Dg~V~iWd~~~~~~~~~~~~~~------   91 (703)
                      ...| .+++.+  .++..-..+ . ++++|  ||++++.++          .++.|.+||..+.+....+.-..      
T Consensus        62 ~ViD~~t~~v~--~~I~vG~~P-~-va~sp--DG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~  135 (386)
T 3sjl_D           62 FVIDGEAGRVI--GMIDGGFLP-N-PVVAD--DGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLV  135 (386)
T ss_dssp             EEEETTTTEEE--EEEEECSSC-E-EEECT--TSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCB
T ss_pred             EEEECCCCeEE--EEEECCCCC-c-EEECC--CCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCcccccc
Confidence            3444 466766  666654555 4 99999  999887765          36789999999987665553221      


Q ss_pred             -CcEEEEEEecCCCEEEEEEC--CCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEE
Q psy7108          92 -SDALCVAYKPDGTEIVVATL--DGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCI  168 (703)
Q Consensus        92 -~~V~~v~~spdg~~las~s~--dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l  168 (703)
                       .....++|+|||++++++..  ++.|.++|+.+++.+.++....                      . ...+....+.+
T Consensus       136 g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g----------------------~-~~~~P~g~~~~  192 (386)
T 3sjl_D          136 GTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD----------------------C-YHIFPTAPDTF  192 (386)
T ss_dssp             SCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS----------------------E-EEEEEEETTEE
T ss_pred             CCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC----------------------c-ceeecCCCcee
Confidence             24567999999999988864  6899999999999998885421                      1 12233344567


Q ss_pred             EEEecCCcEEEEECCC-CceEEEEEeccCCccccccccc-eeeeec-cCCCEEEEEcccCCCCCeeEEECCCCCCCcc--
Q psy7108         169 LAAGQSKYICIYSSRE-GILLKKFTITQNKSLDGINDFI-NRRKMT-EFGNVSLIETRETHEGGNVVLKLPGVKKGDM--  243 (703)
Q Consensus       169 ~s~s~dg~I~lwD~~~-~~~~~~~~~~~~~~~~~~~~~v-~~~~~s-pdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~--  243 (703)
                      ++.+.||.+.+.++.+ ++...+..  ..  .+.....+ ....|. ++|+.++++. ++      .+.+.|..+...  
T Consensus       193 ~~~~~DG~~~~v~~~~~g~v~~~~~--~~--~~~~~~~~~~~~~~~~~dG~~~~vs~-~g------~V~v~d~~~~~~~v  261 (386)
T 3sjl_D          193 FMHCRDGSLAKVAFGTEGTPEITHT--EV--FHPEDEFLINHPAYSQKAGRLVWPTY-TG------KIHQIDLSSGDAKF  261 (386)
T ss_dssp             EEEETTSCEEEEECCSSSCCEEEEC--CC--CSCTTSCBCSCCEEETTTTEEEEEBT-TS------EEEEEECTTSSCEE
T ss_pred             EEECCCCCEEEEECCCCCeEEEeec--ce--eccccccccccceeEcCCCcEEEEeC-CC------EEEEEECCCCccee
Confidence            7778888888888876 55432211  11  11111122 224553 6776655444 32      688888765532  


Q ss_pred             ceeec---------C-CccceEEEEEcCCCCEEEEEeC--------C--C-EEEEEcCCCceeccee-----eeEEEccc
Q psy7108         244 AARVL---------K-PEVRVFCVKFSPTGQAWVAATT--------E--G-VHIYSLDSGYVFDPFL-----LDISITPQ  297 (703)
Q Consensus       244 ~~~~~---------~-h~~~V~~l~~spdg~~l~s~s~--------D--g-v~iwd~~~~~~~~~~~-----~~~~~spd  297 (703)
                      .....         + .......++++|+++.++....        +  . |.++|+.+++.+..+.     ..+.+++|
T Consensus       262 ~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~~~lavs~D  341 (386)
T 3sjl_D          262 LPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQD  341 (386)
T ss_dssp             CCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECSS
T ss_pred             ecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCCcceEEECCC
Confidence            21111         0 1123345778999998876642        1  2 8899999999876654     47999999


Q ss_pred             hhhhHhhcCCcceEEEEEEecCch
Q psy7108         298 SVKEALADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       298 ~~~~~l~sg~~~~~l~la~~l~~~  321 (703)
                      +...++.+...++.+.+ ++....
T Consensus       342 ~~~~ly~tn~~~~~VsV-iD~~t~  364 (386)
T 3sjl_D          342 EKPLLYALSTGDKTLYI-HDAESG  364 (386)
T ss_dssp             SSCEEEEEETTTTEEEE-EETTTC
T ss_pred             CCeEEEEEcCCCCeEEE-EECCCC
Confidence            93234444444566665 665543

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=98.91  E-value=5.4e-07  Score=91.62  Aligned_cols=215  Identities=7%  Similarity=0.041  Sum_probs=145.9

Q ss_pred             CCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEe-cCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCC
Q psy7108          45 GHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETI-QLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESA  123 (703)
Q Consensus        45 gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~-~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~  123 (703)
                      .....+.++++++  +|.+.++...++.|.+||.. ++...... .....+.+++++++|+..++...++.|..+|.. +
T Consensus        17 ~~~~~p~~i~~d~--~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g   92 (300)
T 2qc5_A           17 IPDSGPYGITSSE--DGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-G   92 (300)
T ss_dssp             STTCCEEEEEECT--TSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred             CCCCCcceeeECC--CCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-C
Confidence            3456789999999  99988887778999999987 43222112 233678999999999877776667899999987 5


Q ss_pred             cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCcccccc
Q psy7108         124 AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGIN  203 (703)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~  203 (703)
                      +.. .+....                  ....+..++++++|+.+++...++.|..+|.. ++.. .+....      ..
T Consensus        93 ~~~-~~~~~~------------------~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~-~~~~~~------~~  145 (300)
T 2qc5_A           93 GFT-EYPLPQ------------------PDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY-EYDLPN------KG  145 (300)
T ss_dssp             CEE-EEECSS------------------TTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE-EEECSS------TT
T ss_pred             CeE-EecCCC------------------CCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEE-EccCCC------CC
Confidence            543 222211                  01268899999999988877767889999987 5543 332211      12


Q ss_pred             ccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcccee-ecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCC
Q psy7108         204 DFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAAR-VLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDS  281 (703)
Q Consensus       204 ~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~-~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~  281 (703)
                      ..+..+++.++|+..++....      ..|..+|. +++.... ...+...+.+++++++|+.+++....+ |.+|+. +
T Consensus       146 ~~~~~i~~d~~g~l~v~~~~~------~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~  217 (300)
T 2qc5_A          146 SYPAFITLGSDNALWFTENQN------NSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-T  217 (300)
T ss_dssp             CCEEEEEECTTSSEEEEETTT------TEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-T
T ss_pred             CCceeEEECCCCCEEEEecCC------CeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-C
Confidence            356789999999965554433      26888887 5543322 123345688999999998777666666 999987 4


Q ss_pred             Cceec-------ceeeeEEEccch
Q psy7108         282 GYVFD-------PFLLDISITPQS  298 (703)
Q Consensus       282 ~~~~~-------~~~~~~~~spd~  298 (703)
                      +....       .....+++++++
T Consensus       218 g~~~~~~~~~~~~~~~~i~~d~~g  241 (300)
T 2qc5_A          218 GEISEYDIPTPNARPHAITAGKNS  241 (300)
T ss_dssp             CCEEEEECSSTTCCEEEEEECSTT
T ss_pred             CcEEEEECCCCCCCceEEEECCCC
Confidence            43321       112457778877

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=98.91  E-value=3.9e-08  Score=104.04  Aligned_cols=144  Identities=8%  Similarity=0.042  Sum_probs=111.5

Q ss_pred             ccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCC
Q psy7108          43 LSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVES  122 (703)
Q Consensus        43 l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~  122 (703)
                      ...+.+ |+.++|    ++++|+++ .++.|++||+.+.........+...+.++.+.+.  .+++++.||.|.+||+.+
T Consensus        84 ~~~lp~-V~~l~f----d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~  155 (388)
T 1xip_A           84 EKEIPD-VIFVCF----HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRT  155 (388)
T ss_dssp             EEECTT-EEEEEE----ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTT
T ss_pred             EeeCCC-eeEEEE----CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccC
Confidence            335667 999999    46888888 8899999999877666666678888988887754  388899999999999998


Q ss_pred             CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCce--EEEEEeccCCccc
Q psy7108         123 AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGIL--LKKFTITQNKSLD  200 (703)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~--~~~~~~~~~~~~~  200 (703)
                      +.... +   ..                    .|+|++|||+|  ++.|..||++++|+...+..  .+++..+..  +.
T Consensus       156 ~~~~~-~---~~--------------------~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~--~~  207 (388)
T 1xip_A          156 KSTKQ-L---AQ--------------------NVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSE--LE  207 (388)
T ss_dssp             CCEEE-E---EE--------------------SEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHH--HH
T ss_pred             Ccccc-c---cC--------------------CceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcc--cc
Confidence            87643 1   11                    69999999999  67899999999999987775  555532221  11


Q ss_pred             ---cccccceeeeeccCCCEEEEEc
Q psy7108         201 ---GINDFINRRKMTEFGNVSLIET  222 (703)
Q Consensus       201 ---~~~~~v~~~~~spdg~~l~~~~  222 (703)
                         ++...|.++.|.+++.++++-.
T Consensus       208 ~~~~~~~~V~sI~wl~~~~flv~y~  232 (388)
T 1xip_A          208 ELPVEEYSPLSVTILSPQDFLAVFG  232 (388)
T ss_dssp             TSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred             cccCCCeeEEEEEEecCCeEEEEEc
Confidence               2456899999999999877643

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=98.91  E-value=3.2e-07  Score=95.47  Aligned_cols=200  Identities=14%  Similarity=0.094  Sum_probs=126.3

Q ss_pred             eeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecC-----CCcEEEEEEecCC
Q psy7108          29 KKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQL-----LSDALCVAYKPDG  103 (703)
Q Consensus        29 ~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~-----~~~V~~v~~spdg  103 (703)
                      ..++..+...  ..+. +...+.+++|+|  +|+++++. .+ .|.+||..+++. ..+...     ...+.+++++|+|
T Consensus        74 ~~~d~~~~~~--~~~~-~~~~v~~i~~~~--dg~l~v~~-~~-gl~~~d~~~g~~-~~~~~~~~~~~~~~~~~i~~d~~G  145 (326)
T 2ghs_A           74 HELHLASGRK--TVHA-LPFMGSALAKIS--DSKQLIAS-DD-GLFLRDTATGVL-TLHAELESDLPGNRSNDGRMHPSG  145 (326)
T ss_dssp             EEEETTTTEE--EEEE-CSSCEEEEEEEE--TTEEEEEE-TT-EEEEEETTTCCE-EEEECSSTTCTTEEEEEEEECTTS
T ss_pred             EEEECCCCcE--EEEE-CCCcceEEEEeC--CCeEEEEE-CC-CEEEEECCCCcE-EEEeeCCCCCCCCCCCCEEECCCC
Confidence            3445444333  3333 346799999999  88877765 44 489999877753 233222     2358899999999


Q ss_pred             CEEEEEEC------CCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEE-ecCCc
Q psy7108         104 TEIVVATL------DGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAA-GQSKY  176 (703)
Q Consensus       104 ~~las~s~------dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~-s~dg~  176 (703)
                      +.+++...      .+.|..++  +++...... ...                    ....++|+||++.++.+ +.++.
T Consensus       146 ~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~-~~~--------------------~~~~i~~s~dg~~lyv~~~~~~~  202 (326)
T 2ghs_A          146 ALWIGTMGRKAETGAGSIYHVA--KGKVTKLFA-DIS--------------------IPNSICFSPDGTTGYFVDTKVNR  202 (326)
T ss_dssp             CEEEEEEETTCCTTCEEEEEEE--TTEEEEEEE-EES--------------------SEEEEEECTTSCEEEEEETTTCE
T ss_pred             CEEEEeCCCcCCCCceEEEEEe--CCcEEEeeC-CCc--------------------ccCCeEEcCCCCEEEEEECCCCE
Confidence            97665432      24566666  454332222 111                    46789999999877655 45688


Q ss_pred             EEEEECC--CC-ceE--EEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCc
Q psy7108         177 ICIYSSR--EG-ILL--KKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPE  251 (703)
Q Consensus       177 I~lwD~~--~~-~~~--~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~  251 (703)
                      |.+||+.  ++ ...  ..+....     ........++++++|...++....      ..|..||. +++....+..+.
T Consensus       203 I~~~d~~~~~Gl~~~~~~~~~~~~-----~~~~~p~gi~~d~~G~lwva~~~~------~~v~~~d~-~g~~~~~i~~~~  270 (326)
T 2ghs_A          203 LMRVPLDARTGLPTGKAEVFIDST-----GIKGGMDGSVCDAEGHIWNARWGE------GAVDRYDT-DGNHIARYEVPG  270 (326)
T ss_dssp             EEEEEBCTTTCCBSSCCEEEEECT-----TSSSEEEEEEECTTSCEEEEEETT------TEEEEECT-TCCEEEEEECSC
T ss_pred             EEEEEcccccCCcccCceEEEECC-----CCCCCCCeeEECCCCCEEEEEeCC------CEEEEECC-CCCEEEEEECCC
Confidence            9999986  55 321  2221110     111245678999999866654332      26888988 566666666666


Q ss_pred             cceEEEEEc-CCCCEEEEEeC
Q psy7108         252 VRVFCVKFS-PTGQAWVAATT  271 (703)
Q Consensus       252 ~~V~~l~~s-pdg~~l~s~s~  271 (703)
                      ..+.+++|+ |+++.|+.++.
T Consensus       271 ~~~~~~af~g~d~~~L~vt~~  291 (326)
T 2ghs_A          271 KQTTCPAFIGPDASRLLVTSA  291 (326)
T ss_dssp             SBEEEEEEESTTSCEEEEEEB
T ss_pred             CCcEEEEEecCCCCEEEEEec
Confidence            679999998 89887754443

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=98.90  E-value=7.1e-08  Score=103.50  Aligned_cols=252  Identities=11%  Similarity=0.063  Sum_probs=158.1

Q ss_pred             eec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEe----------CCCcEEEEEcCCCceeEEEecC-------C
Q psy7108          30 KGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSAS----------WDKTVKLWNAVETDTQHETIQL-------L   91 (703)
Q Consensus        30 ~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs----------~Dg~V~iWd~~~~~~~~~~~~~-------~   91 (703)
                      +.| .+++.+  .++..-..+  .++++|  |+++|+.+.          .++.|.++|..+.+....+.-.       .
T Consensus       103 VID~~t~~vv--~~I~vG~~P--gia~Sp--Dgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g  176 (426)
T 3c75_H          103 VIDGSTGRIL--GMTDGGFLP--HPVAAE--DGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVG  176 (426)
T ss_dssp             EEETTTTEEE--EEEEECSSC--EEEECT--TSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBS
T ss_pred             EEECCCCEEE--EEEECCCCC--ceEECC--CCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccC
Confidence            344 466766  666544556  899999  999888775          4678999999988765554321       2


Q ss_pred             CcEEEEEEecCCCEEEEEEC--CCeEEEEEcCCCcEEEEEeccccC----CCCC------CCCccchhhc----------
Q psy7108          92 SDALCVAYKPDGTEIVVATL--DGQLIMFDVESAAQVGSVEARRDL----DSGR------LDTDLVTREQ----------  149 (703)
Q Consensus        92 ~~V~~v~~spdg~~las~s~--dg~I~vwd~~~~~~~~~~~~~~~~----~~~~------~~~~~~~~~~----------  149 (703)
                      .....++|+|||++++++..  ++.|.+.|+.+++.+..+......    ...+      ..........          
T Consensus       177 ~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~  256 (426)
T 3c75_H          177 TYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNT  256 (426)
T ss_dssp             CCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEEC
T ss_pred             CCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEee
Confidence            34567899999999998874  578999999999988777642100    0000      0000000000          


Q ss_pred             ---ccCCcc-EEEEEEcCCCCEEEEEecCCcEEEEECCCCceE--EEEEeccCCc-ccc-ccccceeeeeccCCCEEEEE
Q psy7108         150 ---SLKAKA-VSTVCYSADGSCILAAGQSKYICIYSSREGILL--KKFTITQNKS-LDG-INDFINRRKMTEFGNVSLIE  221 (703)
Q Consensus       150 ---~~~~~~-V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~--~~~~~~~~~~-~~~-~~~~v~~~~~spdg~~l~~~  221 (703)
                         .....+ ...+.+++++..++..+..+.+.+.|+......  ..+....... ..+ .......++++|+++.+++.
T Consensus       257 ~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa  336 (426)
T 3c75_H          257 EVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLL  336 (426)
T ss_dssp             CCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEE
T ss_pred             eeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEE
Confidence               000000 012356777777777677788888888655422  1121110000 000 01122347899999988876


Q ss_pred             cccCC----CCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCC-EEEEEeC-CC-EEEEEcCCCceecce
Q psy7108         222 TRETH----EGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQ-AWVAATT-EG-VHIYSLDSGYVFDPF  288 (703)
Q Consensus       222 ~~~~~----~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~-~l~s~s~-Dg-v~iwd~~~~~~~~~~  288 (703)
                      ...+.    ......|.+.|..+.+.+.++... ...++++|+|||+ .++++.. ++ |.|+|+.+++....+
T Consensus       337 ~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg-~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI  409 (426)
T 3c75_H          337 VDQRDEWKHKAASRFVVVLNAETGERINKIELG-HEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV  409 (426)
T ss_dssp             EEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred             ecccccccccCCCCEEEEEECCCCeEEEEEECC-CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence            54221    112357999999999888777532 2588999999999 8887774 66 999999999887654

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=98.88  E-value=2.2e-07  Score=100.08  Aligned_cols=224  Identities=11%  Similarity=0.095  Sum_probs=136.9

Q ss_pred             ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCC--cEEEEEcCCCceeEEE---ec-CCCcEEEEEEec
Q psy7108          28 VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDK--TVKLWNAVETDTQHET---IQ-LLSDALCVAYKP  101 (703)
Q Consensus        28 v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg--~V~iWd~~~~~~~~~~---~~-~~~~V~~v~~sp  101 (703)
                      ++.+|..+..+  ..+........ ++|+|  +++.|++++.++  .|.+|+..++......   .. ....+.+++++|
T Consensus       154 I~~id~~~g~~--~~~~~~~~~~~-ia~~~--~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p  228 (409)
T 3hrp_A          154 VRLISVDDNKV--TTVHPGFKGGK-PAVTK--DKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDE  228 (409)
T ss_dssp             EEEEETTTTEE--EEEEETCCBCB-CEECT--TSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECT
T ss_pred             EEEEECCCCEE--EEeeccCCCCc-eeEec--CCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeC
Confidence            56677654433  33322223333 99999  999999888766  6888887655432222   12 445678899999


Q ss_pred             CCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC-CCEEEEEecCCcEEEE
Q psy7108         102 DGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD-GSCILAAGQSKYICIY  180 (703)
Q Consensus       102 dg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd-g~~l~s~s~dg~I~lw  180 (703)
                      ++..|+++..++.|+.||..++... .+..... ...            ....+...++|+|+ +.++++-..++.|+.|
T Consensus       229 ~~g~lyv~d~~~~I~~~d~~~~~~~-~~~~~~~-~g~------------~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~  294 (409)
T 3hrp_A          229 TEEWLYFVDSNKNFGRFNVKTQEVT-LIKQLEL-SGS------------LGTNPGPYLIYYFVDSNFYMSDQNLSSVYKI  294 (409)
T ss_dssp             TSSEEEEECTTCEEEEEETTTCCEE-EEEECCC-CSC------------CCCSSCCEEEEETTTTEEEEEETTTTEEEEE
T ss_pred             CCCeEEEEECCCcEEEEECCCCCEE-EEecccc-cCC------------CCCCccccEEEeCCCCEEEEEeCCCCEEEEE
Confidence            6666666777889999999877632 2211100 000            00001128999995 5555555667889999


Q ss_pred             ECCCCceEEEEEeccC--Cccc-----cccccceeeeeccCCCEEEEEc-ccCCCCCeeEEECCCCCCCccceeecCC--
Q psy7108         181 SSREGILLKKFTITQN--KSLD-----GINDFINRRKMTEFGNVSLIET-RETHEGGNVVLKLPGVKKGDMAARVLKP--  250 (703)
Q Consensus       181 D~~~~~~~~~~~~~~~--~~~~-----~~~~~v~~~~~spdg~~l~~~~-~~~~~~~~~~i~iwd~~~~~~~~~~~~h--  250 (703)
                      |....  ...+.+...  ...+     ........++++++|+.+++.. ..      ..|+.||..++... .+.++  
T Consensus       295 ~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~------~~I~~~~~~~G~v~-~~~g~~~  365 (409)
T 3hrp_A          295 TPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKG------YCLRKLDILDGYVS-TVAGQVD  365 (409)
T ss_dssp             CTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTT------CEEEEEETTTTEEE-EEEECTT
T ss_pred             ecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCC------CEEEEEECCCCEEE-EEeCCCC
Confidence            97644  333433320  0001     1123467899999999666654 33      47999987666532 22222  


Q ss_pred             -------------ccceEEEEEcCCCCEEEEEeCCC-EEEEEc
Q psy7108         251 -------------EVRVFCVKFSPTGQAWVAATTEG-VHIYSL  279 (703)
Q Consensus       251 -------------~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~  279 (703)
                                   -....+++++|+|..+++-..++ |+.+++
T Consensus       366 ~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~  408 (409)
T 3hrp_A          366 VASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV  408 (409)
T ss_dssp             CBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred             CCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence                         23588999999987767666666 777664

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=98.84  E-value=1e-07  Score=100.11  Aligned_cols=214  Identities=7%  Similarity=0.031  Sum_probs=135.7

Q ss_pred             cCeEEEEEcCCCCCCEEEEEe--CCCcEEEEEcCCCceeEEEe-------cCCCcEEEEEEecCCCEEEEEEC-----CC
Q psy7108          48 GPVSCIEFSPVLSSTGMVSAS--WDKTVKLWNAVETDTQHETI-------QLLSDALCVAYKPDGTEIVVATL-----DG  113 (703)
Q Consensus        48 ~~V~~l~~sp~~dg~~L~sgs--~Dg~V~iWd~~~~~~~~~~~-------~~~~~V~~v~~spdg~~las~s~-----dg  113 (703)
                      .....++++|  +|+.+++..  .++.++||.+.++ ......       .+-..+.+++++++|+++++-..     ++
T Consensus        17 ~~p~~va~~~--~g~~~v~~~~~~~~~~~l~~~~~g-~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~   93 (343)
T 2qe8_A           17 LAPGNITLTP--DGRLFLSLHQFYQPEMQVAELTQD-GLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVP   93 (343)
T ss_dssp             SCEEEEEECT--TSCEEEEECGGGCCSCSEEEEETT-EEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCC
T ss_pred             CCcceEEECC--CCCEEEEeCCCCCCceEEEEECCC-CeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCC
Confidence            6789999999  999998874  2343667776533 332111       13457899999999876665433     57


Q ss_pred             eEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEE-EEEe---cCCcEEEEECCCCceEE
Q psy7108         114 QLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCI-LAAG---QSKYICIYSSREGILLK  189 (703)
Q Consensus       114 ~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l-~s~s---~dg~I~lwD~~~~~~~~  189 (703)
                      .|.+||+.+++.+..+......              ..+...+..++++|++..+ ++..   .++.|.+||+.+++..+
T Consensus        94 ~i~~~d~~tg~~~~~~~~~~~~--------------~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r  159 (343)
T 2qe8_A           94 KLVAWDTLNNQLSRVIYLPPPI--------------TLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAAR  159 (343)
T ss_dssp             EEEEEETTTTEEEEEEECCTTT--------------SCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEE
T ss_pred             eEEEEECCCCeEEEEEECChhh--------------cccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEE
Confidence            8999999999877777543210              0112246789999865555 4444   57889999999887766


Q ss_pred             EEEeccCC-------cccc--------------ccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC---CC----
Q psy7108         190 KFTITQNK-------SLDG--------------INDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK---KG----  241 (703)
Q Consensus       190 ~~~~~~~~-------~~~~--------------~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~---~~----  241 (703)
                      .+..+...       ..++              ....++.++++|+|+.++++...+     ..+..++..   .+    
T Consensus       160 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~-----~~l~~~~~~~~~~~~~~~  234 (343)
T 2qe8_A          160 VLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHS-----TSMYRIKSADLSNLQLTD  234 (343)
T ss_dssp             ECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSC-----SEEEEEEHHHHTCTTCCH
T ss_pred             EecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCC-----CeEEEEEHHHhcCCCCCh
Confidence            55332110       0111              112357899999999888776543     234333321   11    


Q ss_pred             -ccce--eecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCc
Q psy7108         242 -DMAA--RVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGY  283 (703)
Q Consensus       242 -~~~~--~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~  283 (703)
                       +...  ...++......++++++|+.+++...++ |.+|+..+++
T Consensus       235 ~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~  280 (343)
T 2qe8_A          235 AELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRA  280 (343)
T ss_dssp             HHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTE
T ss_pred             hhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCC
Confidence             0000  1112233466799999999888888777 9999985554

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=98.82  E-value=1.1e-09  Score=116.64  Aligned_cols=185  Identities=10%  Similarity=0.094  Sum_probs=103.7

Q ss_pred             CCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCC
Q psy7108          60 SSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGR  139 (703)
Q Consensus        60 dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~  139 (703)
                      ++..+++++.||.|+.||..+++.......  +.+.+..+..++..+++++.|+.|+.||..+|+.+..+..+..     
T Consensus         8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~-----   80 (369)
T 2hz6_A            8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIP-----   80 (369)
T ss_dssp             CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHH-----
T ss_pred             eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCc-----
Confidence            578899999999999999999977665544  5566666667787888888999999999998887655433210     


Q ss_pred             CCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEE
Q psy7108         140 LDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSL  219 (703)
Q Consensus       140 ~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~  219 (703)
                              . .....+    ++. ++..+++++.|+.++.||.++|+.+.++..+.            ...++|++..++
T Consensus        81 --------~-~~~~sp----~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~------------~~~~~p~~~~v~  134 (369)
T 2hz6_A           81 --------E-LVQASP----CRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF------------ADSLSPSTSLLY  134 (369)
T ss_dssp             --------H-HHTTCS----CC------CCCCEEEEEEEEECCC----------------------------------EE
T ss_pred             --------c-ccccCc----eEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC------------cccccccCCEEE
Confidence                    0 000001    111 34567788889999999999998877665322            123456777777


Q ss_pred             EEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCC---CEEEEEeCCC-EEEEEcCCCcee
Q psy7108         220 IETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTG---QAWVAATTEG-VHIYSLDSGYVF  285 (703)
Q Consensus       220 ~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg---~~l~s~s~Dg-v~iwd~~~~~~~  285 (703)
                      +++.+      ..++.||.++|+.+.....+.  ....+++++.   ..+++++.|| +..||..+|+..
T Consensus       135 ~~~~d------g~v~a~d~~tG~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~  196 (369)
T 2hz6_A          135 LGRTE------YTITMYDTKTRELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVL  196 (369)
T ss_dssp             EEEEE------EEEECCCSSSSSCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEE
T ss_pred             EEecC------CEEEEEECCCCCEEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECCCCcEE
Confidence            76654      389999999998765543211  1223334432   5677788889 999999998764

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=98.75  E-value=1.2e-07  Score=99.85  Aligned_cols=244  Identities=9%  Similarity=-0.067  Sum_probs=145.7

Q ss_pred             eec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEe----------CCCcEEEEEcCCCceeEEEecC-------C
Q psy7108          30 KGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSAS----------WDKTVKLWNAVETDTQHETIQL-------L   91 (703)
Q Consensus        30 ~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs----------~Dg~V~iWd~~~~~~~~~~~~~-------~   91 (703)
                      ..| .+++.+  .++.....+  .+.++|  |+++++.+.          .+++|.+||..+.+....+.-.       .
T Consensus        50 vID~~t~~v~--~~i~vG~~P--~i~~sp--Dg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g  123 (368)
T 1mda_H           50 VSCAGCGVTL--GHSLGAFLS--LAVAGH--SGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVG  123 (368)
T ss_dssp             EEETTTTEEE--EEEEECTTC--EEEECT--TSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBS
T ss_pred             EEECCCCeEE--EEEeCCCCC--ceEECC--CCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccC
Confidence            445 467777  666554556  799999  999888886          3688999999999776665432       1


Q ss_pred             CcEEEEEEecCCCEEEEEEC--CCeEEE--EEcCCCcEEEEEecccc----------CCCCCCCC--------------c
Q psy7108          92 SDALCVAYKPDGTEIVVATL--DGQLIM--FDVESAAQVGSVEARRD----------LDSGRLDT--------------D  143 (703)
Q Consensus        92 ~~V~~v~~spdg~~las~s~--dg~I~v--wd~~~~~~~~~~~~~~~----------~~~~~~~~--------------~  143 (703)
                      .....++++|||++++++..  +..|.+  +|+.+   +..+.....          +.......              .
T Consensus       124 ~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~  200 (368)
T 1mda_H          124 PRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAG  200 (368)
T ss_dssp             CCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCE
T ss_pred             CCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCC
Confidence            34568999999999998875  457888  98876   333321100          00000000              0


Q ss_pred             cch----hhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCc--eEEEEEeccCC-cccc-ccccceeeeeccCC
Q psy7108         144 LVT----REQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGI--LLKKFTITQNK-SLDG-INDFINRRKMTEFG  215 (703)
Q Consensus       144 ~~~----~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~--~~~~~~~~~~~-~~~~-~~~~v~~~~~spdg  215 (703)
                      ...    ........+.   + ++++..++..+. +.+.+.|+.+..  .+..+...... ...+ .......++++||+
T Consensus       201 ~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg  275 (368)
T 1mda_H          201 IVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNT  275 (368)
T ss_dssp             ECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTT
T ss_pred             eEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCC
Confidence            000    0000011222   2 555666666556 889999986542  22222111000 0000 00112236899999


Q ss_pred             CEEEEEcc-c-CC-CCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEE-EEEe-CCC-EEEEEcCCCceecce
Q psy7108         216 NVSLIETR-E-TH-EGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAW-VAAT-TEG-VHIYSLDSGYVFDPF  288 (703)
Q Consensus       216 ~~l~~~~~-~-~~-~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l-~s~s-~Dg-v~iwd~~~~~~~~~~  288 (703)
                      +.++++.. . +. ......+.++|..+++.+.++.... ...+++|+|||+.+ ++.. .++ |.++|+.+++.+..+
T Consensus       276 ~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I  353 (368)
T 1mda_H          276 DGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSV  353 (368)
T ss_dssp             TEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEEC
T ss_pred             CEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEE
Confidence            98887643 1 10 0000135599999998777665433 58899999999854 5555 467 999999999887554

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=98.73  E-value=5.5e-07  Score=96.54  Aligned_cols=243  Identities=7%  Similarity=-0.041  Sum_probs=146.8

Q ss_pred             CCCEEEEEeC-C----CcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEE----------CCCeEEEEEcCCCc
Q psy7108          60 SSTGMVSASW-D----KTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVAT----------LDGQLIMFDVESAA  124 (703)
Q Consensus        60 dg~~L~sgs~-D----g~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s----------~dg~I~vwd~~~~~  124 (703)
                      +++.++.+.. +    ++|.+.|..+.+.+..+.....+  .++++|||+.++++.          .++.|.++|..+++
T Consensus        83 ~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~  160 (426)
T 3c75_H           83 DARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFL  160 (426)
T ss_dssp             CTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC
T ss_pred             CCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCc
Confidence            6676666544 3    69999999998766555544444  899999999888776          36789999999999


Q ss_pred             EEEEEecc--ccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec--CCcEEEEECCCCceEEEEEeccCCccc
Q psy7108         125 QVGSVEAR--RDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ--SKYICIYSSREGILLKKFTITQNKSLD  200 (703)
Q Consensus       125 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~--dg~I~lwD~~~~~~~~~~~~~~~~~~~  200 (703)
                      .+..+.-.  ....               .......++++|||++++++..  ++.|.+.|+.+++.+.++.........
T Consensus       161 vv~~I~v~g~~r~~---------------~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~  225 (426)
T 3c75_H          161 PIADIELPDAPRFL---------------VGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIF  225 (426)
T ss_dssp             EEEEEEETTCCCCC---------------BSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEE
T ss_pred             EEEEEECCCccccc---------------cCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeec
Confidence            98887532  1000               0012245789999999999874  578999999999988887653210000


Q ss_pred             cccccceeeeeccCCCEEEEEcccCCCCC-------------------------------eeEEECCCCCCCccc--eee
Q psy7108         201 GINDFINRRKMTEFGNVSLIETRETHEGG-------------------------------NVVLKLPGVKKGDMA--ARV  247 (703)
Q Consensus       201 ~~~~~v~~~~~spdg~~l~~~~~~~~~~~-------------------------------~~~i~iwd~~~~~~~--~~~  247 (703)
                      . ...-..+.++++|+.+++....+....                               ...+.+.|.......  ...
T Consensus       226 p-~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~  304 (426)
T 3c75_H          226 P-ASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPI  304 (426)
T ss_dssp             E-EETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCE
T ss_pred             c-CCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeee
Confidence            0 001112456666666655542210000                               012333332211100  000


Q ss_pred             c---C-------CccceEEEEEcCCCCEEEEEeC----------CC-EEEEEcCCCceeccee-----eeEEEccchhhh
Q psy7108         248 L---K-------PEVRVFCVKFSPTGQAWVAATT----------EG-VHIYSLDSGYVFDPFL-----LDISITPQSVKE  301 (703)
Q Consensus       248 ~---~-------h~~~V~~l~~spdg~~l~s~s~----------Dg-v~iwd~~~~~~~~~~~-----~~~~~spd~~~~  301 (703)
                      .   .       .......++++|+++.++++..          .+ |.++|..+.+.+..+.     ..+.|+||+.. 
T Consensus       305 ~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gia~spDg~~-  383 (426)
T 3c75_H          305 EALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHEIDSINVSQDAEP-  383 (426)
T ss_dssp             ESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSC-
T ss_pred             eeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCCcCeEEEccCCCE-
Confidence            0   0       0011123789999988766532          23 9999999998876654     56899999931 


Q ss_pred             HhhcCC-cceEEEEEEecCchh
Q psy7108         302 ALADKD-YAKALMMSLKLNEQG  322 (703)
Q Consensus       302 ~l~sg~-~~~~l~la~~l~~~~  322 (703)
                      .+.... .++.+.+ +++...+
T Consensus       384 ~lyv~n~~s~~VsV-ID~~t~k  404 (426)
T 3c75_H          384 LLYALSAGTQTLHI-YDAATGE  404 (426)
T ss_dssp             EEEEEETTTTEEEE-EETTTCC
T ss_pred             EEEEEcCCCCeEEE-EECCCCC
Confidence            333333 4677766 6765543

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=98.71  E-value=5.7e-07  Score=103.84  Aligned_cols=197  Identities=11%  Similarity=0.061  Sum_probs=125.6

Q ss_pred             EEEEEcCCCCCCEEEEEeCCCc-------------EEEEEcCCCcee-EEEec----CCCcEEEEEEecCCCEEEEEEC-
Q psy7108          51 SCIEFSPVLSSTGMVSASWDKT-------------VKLWNAVETDTQ-HETIQ----LLSDALCVAYKPDGTEIVVATL-  111 (703)
Q Consensus        51 ~~l~~sp~~dg~~L~sgs~Dg~-------------V~iWd~~~~~~~-~~~~~----~~~~V~~v~~spdg~~las~s~-  111 (703)
                      .+++|+   |++.|+.++.+..             |++|++.+.... ..+..    +.....++.|+|||++|+.... 
T Consensus       178 ~~~~Ws---Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~  254 (693)
T 3iuj_A          178 SGISWL---GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAAN  254 (693)
T ss_dssp             CCCEEE---TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEES
T ss_pred             ccEEEe---CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEcc
Confidence            567888   5777887776643             899999776532 22322    2335788999999998865443 


Q ss_pred             ---CCeEEEEEcCCCc-EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe-cC---CcEEEEECC
Q psy7108         112 ---DGQLIMFDVESAA-QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG-QS---KYICIYSSR  183 (703)
Q Consensus       112 ---dg~I~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s-~d---g~I~lwD~~  183 (703)
                         ++.|+++|+.++. ....+..+..                    ..... |+++|+.|+..+ .+   +.|..+|+.
T Consensus       255 ~~~~~~i~~~d~~~~~~~~~~l~~~~~--------------------~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~  313 (693)
T 3iuj_A          255 STSGNRLYVKDLSQENAPLLTVQGDLD--------------------ADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAA  313 (693)
T ss_dssp             SSSCCEEEEEETTSTTCCCEEEECSSS--------------------SCEEE-EEEETTEEEEEECTTCTTCEEEEEETT
T ss_pred             CCCCcEEEEEECCCCCCceEEEeCCCC--------------------ceEEE-EeccCCEEEEEECCCCCCCEEEEEeCC
Confidence               2489999998763 3334444332                    23333 667776666544 33   579999998


Q ss_pred             CCce--EEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcC
Q psy7108         184 EGIL--LKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSP  261 (703)
Q Consensus       184 ~~~~--~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~sp  261 (703)
                      ++..  .+.+..+..        .+.  .|+++++.+++....   ++...|++||+..+............+..+.++|
T Consensus       314 ~~~~~~~~~l~~~~~--------~~~--~~s~~g~~lv~~~~~---~g~~~l~~~d~~g~~~~~l~~p~~~~~~~~~~~~  380 (693)
T 3iuj_A          314 NPGPAHWRDLIPERQ--------QVL--TVHSGSGYLFAEYMV---DATARVEQFDYEGKRVREVALPGLGSVSGFNGKH  380 (693)
T ss_dssp             SCCGGGCEEEECCCS--------SCE--EEEEETTEEEEEEEE---TTEEEEEEECTTSCEEEEECCSSSSEEEECCCCT
T ss_pred             CCCccccEEEecCCC--------CEE--EEEEECCEEEEEEEE---CCeeEEEEEECCCCeeEEeecCCCceEEeeecCC
Confidence            7654  234433322        222  899999988877654   2345789999875543322223445677888899


Q ss_pred             CCCEEEEEeCC----C-EEEEEcCCCce
Q psy7108         262 TGQAWVAATTE----G-VHIYSLDSGYV  284 (703)
Q Consensus       262 dg~~l~s~s~D----g-v~iwd~~~~~~  284 (703)
                      +++.++....+    + +..||+.+++.
T Consensus       381 d~~~l~~~~ss~~tP~~l~~~d~~~g~~  408 (693)
T 3iuj_A          381 DDPALYFGFENYAQPPTLYRFEPKSGAI  408 (693)
T ss_dssp             TCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred             CCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence            98877544333    4 88888877653

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=98.71  E-value=2.6e-06  Score=84.98  Aligned_cols=196  Identities=10%  Similarity=0.064  Sum_probs=130.9

Q ss_pred             CeEEEEEcCCCCCCEEEEEeC--CCcEEEEEcCCCceeEEEec-CCCcEEEEEEecCCCEEEEEE-CCCeEEEEEcCCCc
Q psy7108          49 PVSCIEFSPVLSSTGMVSASW--DKTVKLWNAVETDTQHETIQ-LLSDALCVAYKPDGTEIVVAT-LDGQLIMFDVESAA  124 (703)
Q Consensus        49 ~V~~l~~sp~~dg~~L~sgs~--Dg~V~iWd~~~~~~~~~~~~-~~~~V~~v~~spdg~~las~s-~dg~I~vwd~~~~~  124 (703)
                      ....+.|+|  ++.++++.+.  ++.|++.|..+++....+.- .......+++.  ++.|..+. .++.+.++|..+.+
T Consensus        22 f~~Gl~~~~--dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~   97 (266)
T 2iwa_A           22 FTQGLVYAE--NDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLS   97 (266)
T ss_dssp             CEEEEEECS--TTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTE
T ss_pred             CcccEEEeC--CCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCc
Confidence            368999999  8765565553  57999999999876555432 11122344444  55665554 57899999999999


Q ss_pred             EEEEEecc-ccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCcccccc
Q psy7108         125 QVGSVEAR-RDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGIN  203 (703)
Q Consensus       125 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~  203 (703)
                      .+.++... ..                    .   ..+++||+.++++..++.|.++|..+.+.+.++........   .
T Consensus        98 v~~~i~~g~~~--------------------g---~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p---~  151 (266)
T 2iwa_A           98 NIKNFTHQMKD--------------------G---WGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHR---V  151 (266)
T ss_dssp             EEEEEECCSSS--------------------C---CEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEE---C
T ss_pred             EEEEEECCCCC--------------------e---EEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcc---c
Confidence            99888643 11                    1   23456788787777788999999999998888774432100   0


Q ss_pred             ccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCC-------------ccceEEEEEcCCCCEEEEEe
Q psy7108         204 DFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKP-------------EVRVFCVKFSPTGQAWVAAT  270 (703)
Q Consensus       204 ~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h-------------~~~V~~l~~spdg~~l~s~s  270 (703)
                      ..++.+.+. +|+ +++.....     ..|.+-|..+++.+..+.-.             ......++|+|+++.+++++
T Consensus       152 ~~~nele~~-dg~-lyvn~~~~-----~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTg  224 (266)
T 2iwa_A          152 IRLNELEYI-NGE-VWANIWQT-----DCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTG  224 (266)
T ss_dssp             CCEEEEEEE-TTE-EEEEETTS-----SEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEE
T ss_pred             ccceeEEEE-CCE-EEEecCCC-----CeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEEC
Confidence            135567777 664 44444321     37889999999877666532             13568999999998775554


Q ss_pred             -CCC-EEEEEcCC
Q psy7108         271 -TEG-VHIYSLDS  281 (703)
Q Consensus       271 -~Dg-v~iwd~~~  281 (703)
                       ... +.+.++..
T Consensus       225 k~~~~v~~i~l~~  237 (266)
T 2iwa_A          225 KLWPKLFEIKLHL  237 (266)
T ss_dssp             TTCSEEEEEEEEE
T ss_pred             CCCCeEEEEEEec
Confidence             444 77777654

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=98.66  E-value=2.2e-06  Score=90.29  Aligned_cols=237  Identities=10%  Similarity=0.042  Sum_probs=144.9

Q ss_pred             ceeec-cCCCccccccccCC-------CcCeEEEEEcCCCCCCEEEEEeC--CCcEEEEEcCCCceeEEEecCCCcEEEE
Q psy7108          28 VKKGD-MAARVLKPEVLSGH-------EGPVSCIEFSPVLSSTGMVSASW--DKTVKLWNAVETDTQHETIQLLSDALCV   97 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l~gH-------~~~V~~l~~sp~~dg~~L~sgs~--Dg~V~iWd~~~~~~~~~~~~~~~~V~~v   97 (703)
                      +..+| .+++.+  ..+.-.       ...-..++++|  ||++++.+..  ++.|.++|+.+++....+ ...+.  ..
T Consensus       111 VsviD~~t~~v~--~~I~v~~g~r~~~g~~P~~~a~sp--DGk~lyVan~~~~~~VsVID~~t~~vv~tI-~v~g~--~~  183 (386)
T 3sjl_D          111 VEVFDPVTLLPT--ADIELPDAPRFLVGTYPWMTSLTP--DGKTLLFYQFSPAPAVGVVDLEGKAFKRML-DVPDC--YH  183 (386)
T ss_dssp             EEEECTTTCCEE--EEEEETTCCCCCBSCCGGGEEECT--TSSEEEEEECSSSCEEEEEETTTTEEEEEE-ECCSE--EE
T ss_pred             EEEEECCCCeEE--EEEECCCccccccCCCCceEEEcC--CCCEEEEEEcCCCCeEEEEECCCCcEEEEE-ECCCc--ce
Confidence            55566 456655  444311       12345689999  9999888763  689999999998655444 33221  22


Q ss_pred             EEecCCCEEEEEECCCeEEEEEcCC-CcEEEEEeccccCCCCCCCCccchhhcccCCccE-EEEEE-cCCCCEEEEEecC
Q psy7108          98 AYKPDGTEIVVATLDGQLIMFDVES-AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAV-STVCY-SADGSCILAAGQS  174 (703)
Q Consensus        98 ~~spdg~~las~s~dg~I~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V-~~i~~-spdg~~l~s~s~d  174 (703)
                      .+....+.+++.+.||++.+.++.+ ++.........+  ..              ..++ ....| .++|++++ .+.+
T Consensus       184 ~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~--~~--------------~~~~~~~~~~~~~dG~~~~-vs~~  246 (386)
T 3sjl_D          184 IFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFH--PE--------------DEFLINHPAYSQKAGRLVW-PTYT  246 (386)
T ss_dssp             EEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCS--CT--------------TSCBCSCCEEETTTTEEEE-EBTT
T ss_pred             eecCCCceeEEECCCCCEEEEECCCCCeEEEeecceec--cc--------------cccccccceeEcCCCcEEE-EeCC
Confidence            3333456777888899999999976 554322111110  00              0011 12355 46776555 5557


Q ss_pred             CcEEEEECCCCc--eEEEEEeccC-Ccccc-ccccceeeeeccCCCEEEEEcccC----CCCCeeEEECCCCCCCcccee
Q psy7108         175 KYICIYSSREGI--LLKKFTITQN-KSLDG-INDFINRRKMTEFGNVSLIETRET----HEGGNVVLKLPGVKKGDMAAR  246 (703)
Q Consensus       175 g~I~lwD~~~~~--~~~~~~~~~~-~~~~~-~~~~v~~~~~spdg~~l~~~~~~~----~~~~~~~i~iwd~~~~~~~~~  246 (703)
                      |.+.+.|+.+..  ....+..... ....+ .......++++++++.+++....+    +.+....|.+.|.++++.+.+
T Consensus       247 g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~  326 (386)
T 3sjl_D          247 GKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAK  326 (386)
T ss_dssp             SEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEE
T ss_pred             CEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEE
Confidence            999999997664  2333321000 00000 012334578899999888865421    111225789999999988777


Q ss_pred             ecCCccceEEEEEcCCCC-EEEEEeC-CC-EEEEEcCCCceeccee
Q psy7108         247 VLKPEVRVFCVKFSPTGQ-AWVAATT-EG-VHIYSLDSGYVFDPFL  289 (703)
Q Consensus       247 ~~~h~~~V~~l~~spdg~-~l~s~s~-Dg-v~iwd~~~~~~~~~~~  289 (703)
                      +.-. ..+++++++||++ .|+++.. ++ |.++|..+++.+..+.
T Consensus       327 i~vg-~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~  371 (386)
T 3sjl_D          327 FEMG-HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVN  371 (386)
T ss_dssp             EEEE-EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEEC
T ss_pred             EECC-CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEec
Confidence            6532 3688999999997 6666544 66 9999999998876654

>1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A*

Probab=98.63  E-value=1.1e-09  Score=115.76  Aligned_cols=172  Identities=22%  Similarity=0.254  Sum_probs=115.9

Q ss_pred             ccceeeeecccchhhhhhhhcCCcccccccccccCCCCCCcCCCcccceeecccCcCCCCCCccccccCchhhhhcccCC
Q psy7108         451 NKFYRFSCDFNVYTLELISRLGPLRIKPKVEKMETGSSDEESSKDDETEIRVLDEDVPRSSDTGDIQLKSTRMNELGLYD  530 (703)
Q Consensus       451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d  530 (703)
                      .+.++|+.+.+.+++.||++|...+++|+...-                              .....+|+|++-||...
T Consensus        20 ~~~~~~~~~~~~~~~~dG~~l~~~~~~~~~~~~------------------------------~~~~~~~~vvl~HG~~~   69 (377)
T 1k8q_A           20 ITYWGYPAEEYEVVTEDGYILGIDRIPYGRKNS------------------------------ENIGRRPVAFLQHGLLA   69 (377)
T ss_dssp             HHHTTCCCEEEEEECTTSEEEEEEEECSCSSCC------------------------------TTTTTCCEEEEECCTTC
T ss_pred             HHHcCCCceEEEeEcCCCCEEEEEEecCCCCCc------------------------------cccCCCCeEEEECCCCC
Confidence            455677777788888999999888887543210                              00114788999999888


Q ss_pred             chhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhhhcccccchhhhcccccceeeeeeeeee
Q psy7108         531 TTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLGNLVTKDMLEGLYGIYALNIFQVGL  610 (703)
Q Consensus       531 ~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~s~~e~~~  610 (703)
                      ...  .|............+.  .-|+.|++.-.++-..+.....   +.|.              ...+|.+++++++.
T Consensus        70 ~~~--~~~~~~~~~~~a~~l~--~~G~~vi~~D~~G~G~S~~~~~---~~~~--------------~~~~~~~~~~~~~~  128 (377)
T 1k8q_A           70 SAT--NWISNLPNNSLAFILA--DAGYDVWLGNSRGNTWARRNLY---YSPD--------------SVEFWAFSFDEMAK  128 (377)
T ss_dssp             CGG--GGSSSCTTTCHHHHHH--HTTCEEEECCCTTSTTSCEESS---SCTT--------------STTTTCCCHHHHHH
T ss_pred             chh--hhhcCCCcccHHHHHH--HCCCCEEEecCCCCCCCCCCCC---CCCC--------------cccccCccHHHHHh
Confidence            766  4433222111111222  3356666655444333221100   0000              01456788899999


Q ss_pred             cchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccccCCCCCh
Q psy7108         611 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLGNLVTR  673 (703)
Q Consensus       611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~~~~~~~  673 (703)
                      +|+.+.+++++...+..+++++|||+|+.+++.++..+|+...+|+.+++++|+........+
T Consensus       129 ~D~~~~i~~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~v~~lvl~~~~~~~~~~~~~  191 (377)
T 1k8q_A          129 YDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAPVATVKYTETL  191 (377)
T ss_dssp             THHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEESCCSCCSSCCSG
T ss_pred             hhHHHHHHHHHHhcCcCceEEEEechhhHHHHHHHhcCchhhhhhhEEEEeCCchhcccchhH
Confidence            999999999999888889999999999999999999888877789999999998876654444

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=98.62  E-value=2.1e-06  Score=90.00  Aligned_cols=220  Identities=9%  Similarity=-0.022  Sum_probs=129.7

Q ss_pred             CCCcCeEEEEEcCCCCCCEEEEEeC-----CCcEEEEEcCCCceeEEEec------CCCcEEEEEEecCCCEEE-EEE--
Q psy7108          45 GHEGPVSCIEFSPVLSSTGMVSASW-----DKTVKLWNAVETDTQHETIQ------LLSDALCVAYKPDGTEIV-VAT--  110 (703)
Q Consensus        45 gH~~~V~~l~~sp~~dg~~L~sgs~-----Dg~V~iWd~~~~~~~~~~~~------~~~~V~~v~~spdg~~la-s~s--  110 (703)
                      +|-..+.+++++|  +++++++-..     ++.|.+||+.+++......-      +...+..++++|++..++ +-.  
T Consensus        64 ~~~~~p~gv~~d~--~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~  141 (343)
T 2qe8_A           64 ITFDTVLGIKSDG--NGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAP  141 (343)
T ss_dssp             CCCSCEEEEEECS--SSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCS
T ss_pred             cceeEeeEEEEcC--CCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCcc
Confidence            4567899999999  8877666543     57899999988754433321      123468899998765554 444  


Q ss_pred             -CCCeEEEEEcCCCcEEEEEeccccCCCCC--CCCccchh---hccc----CCccEEEEEEcCCCCEEEEEecCC-cEEE
Q psy7108         111 -LDGQLIMFDVESAAQVGSVEARRDLDSGR--LDTDLVTR---EQSL----KAKAVSTVCYSADGSCILAAGQSK-YICI  179 (703)
Q Consensus       111 -~dg~I~vwd~~~~~~~~~~~~~~~~~~~~--~~~~~~~~---~~~~----~~~~V~~i~~spdg~~l~s~s~dg-~I~l  179 (703)
                       .++.|.+||+.+++..+.+.+|.......  ...+....   ....    -...+..++|+|||+.|+++..++ .+..
T Consensus       142 ~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~  221 (343)
T 2qe8_A          142 DDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYR  221 (343)
T ss_dssp             GGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEE
T ss_pred             CCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEE
Confidence             57899999999998777665532211100  00000000   0000    012468899999999988887665 4555


Q ss_pred             EECC---CCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCC-ccceE
Q psy7108         180 YSSR---EGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKP-EVRVF  255 (703)
Q Consensus       180 wD~~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h-~~~V~  255 (703)
                      ++..   .+... .-.........+.......++++++|..+++....      ..|.+||..+++........ -..+.
T Consensus       222 ~~~~~~~~~~~~-~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~------~~V~~~d~~~G~~~~~~~~~~~~~p~  294 (343)
T 2qe8_A          222 IKSADLSNLQLT-DAELGSKIERYSEKPICDGISIDKDHNIYVGDLAH------SAIGVITSADRAYKLLVTDEKLSWTD  294 (343)
T ss_dssp             EEHHHHTCTTCC-HHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGG------TEEEEEETTTTEEEEEEECGGGSCEE
T ss_pred             EEHHHhcCCCCC-hhhhhcceEecccCCCCceEEECCCCCEEEEccCC------CeEEEEECCCCCEEEEEECCceecCC
Confidence            5432   11100 00000000000111245678999999877766554      37999998556533222222 34588


Q ss_pred             EEEEcCCCCEEEEEeCCC
Q psy7108         256 CVKFSPTGQAWVAATTEG  273 (703)
Q Consensus       256 ~l~~spdg~~l~s~s~Dg  273 (703)
                      +++|.++|+.+++.+..+
T Consensus       295 ~va~~~~g~l~v~~~~~~  312 (343)
T 2qe8_A          295 SFNFGSDGYLYFDCNQLH  312 (343)
T ss_dssp             EEEECTTSCEEEEECCGG
T ss_pred             eeEECCCCcEEEEeCccc
Confidence            999999998777776544

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=98.59  E-value=4.2e-06  Score=88.87  Aligned_cols=195  Identities=8%  Similarity=0.041  Sum_probs=127.6

Q ss_pred             eEEEEEcCCCCCCEEEEEeCC------CcEEEEEcCCCceeEEEecCCC---cEEEEEEecCCCEEEEEE----------
Q psy7108          50 VSCIEFSPVLSSTGMVSASWD------KTVKLWNAVETDTQHETIQLLS---DALCVAYKPDGTEIVVAT----------  110 (703)
Q Consensus        50 V~~l~~sp~~dg~~L~sgs~D------g~V~iWd~~~~~~~~~~~~~~~---~V~~v~~spdg~~las~s----------  110 (703)
                      -..+..+|  +| +++++..+      |.+.+.|..+.+..........   --..+.|+|+++.++++.          
T Consensus       140 Ph~~~~~p--dG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g  216 (462)
T 2ece_A          140 LHTVHCGP--DA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDG  216 (462)
T ss_dssp             EEEEEECS--SC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTC
T ss_pred             ccceeECC--Ce-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccc
Confidence            34567889  88 77777655      7899999988865555442222   234688999999888874          


Q ss_pred             ---------CCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEE--cCCCCEEEEEe------c
Q psy7108         111 ---------LDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCY--SADGSCILAAG------Q  173 (703)
Q Consensus       111 ---------~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~--spdg~~l~s~s------~  173 (703)
                               .+.+|.+||+.+++.+.++.....                  +.....+.|  +|+++++.+++      .
T Consensus       217 ~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~------------------g~~P~~i~f~~~Pdg~~aYV~~e~~~~~L  278 (462)
T 2ece_A          217 LKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEE------------------NRMALELRPLHDPTKLMGFINMVVSLKDL  278 (462)
T ss_dssp             CCTTTHHHHSCCEEEEEETTTTEEEEEEESCTT------------------EEEEEEEEECSSTTCCEEEEEEEEETTTC
T ss_pred             cchhhhhhccCCEEEEEECCCCcEeeEEecCCC------------------CCccceeEeeECCCCCEEEEEEeeeccCC
Confidence                     368999999999888877765311                  112344555  99999988876      4


Q ss_pred             CCcEEEEECCCCce--EEEEEeccCC---ccc-------cccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC
Q psy7108         174 SKYICIYSSREGIL--LKKFTITQNK---SLD-------GINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG  241 (703)
Q Consensus       174 dg~I~lwD~~~~~~--~~~~~~~~~~---~~~-------~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~  241 (703)
                      +++|.+|....++.  .+.+......   .+.       +.......+.+|+||++++++....     ..|.++|+...
T Consensus       279 ss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~-----d~VavfdV~d~  353 (462)
T 2ece_A          279 SSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGI-----GEVRQYDISNP  353 (462)
T ss_dssp             CEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTT-----TEEEEEECSST
T ss_pred             CceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCC-----CEEEEEEecCC
Confidence            56888777655432  2222211110   010       0013567899999999999988653     37888887522


Q ss_pred             ---ccceeecCC--------------ccceEEEEEcCCCCEEEEEe
Q psy7108         242 ---DMAARVLKP--------------EVRVFCVKFSPTGQAWVAAT  270 (703)
Q Consensus       242 ---~~~~~~~~h--------------~~~V~~l~~spdg~~l~s~s  270 (703)
                         +.+..+...              .+....++++|||++|+++.
T Consensus       354 ~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN  399 (462)
T 2ece_A          354 FKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN  399 (462)
T ss_dssp             TSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred             CCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence               333322211              01357899999999998887

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=98.57  E-value=4.8e-06  Score=82.18  Aligned_cols=194  Identities=9%  Similarity=0.042  Sum_probs=129.9

Q ss_pred             ccccCCCcC--eEEEEEcCCCCCCEEEEEeCCC--cEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEE-CCCeE
Q psy7108          41 EVLSGHEGP--VSCIEFSPVLSSTGMVSASWDK--TVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVAT-LDGQL  115 (703)
Q Consensus        41 ~~l~gH~~~--V~~l~~sp~~dg~~L~sgs~Dg--~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s-~dg~I  115 (703)
                      +++ .|...  ...+.|+   ++.++.+.+.+|  .|+++|+++++..... ............+++..|.... .++.+
T Consensus        35 ~~~-phd~~~ftqGL~~~---~~~LyestG~~g~S~v~~vD~~Tgkv~~~~-~l~~~~FgeGit~~g~~ly~ltw~~~~v  109 (262)
T 3nol_A           35 HSY-PHDTKAFTEGFFYR---NGYFYESTGLNGRSSIRKVDIESGKTLQQI-ELGKRYFGEGISDWKDKIVGLTWKNGLG  109 (262)
T ss_dssp             EEE-ECCTTCEEEEEEEE---TTEEEEEEEETTEEEEEEECTTTCCEEEEE-ECCTTCCEEEEEEETTEEEEEESSSSEE
T ss_pred             EEe-cCCCCcccceEEEE---CCEEEEECCCCCCceEEEEECCCCcEEEEE-ecCCccceeEEEEeCCEEEEEEeeCCEE
Confidence            444 35433  4788887   457777777766  8999999999765544 3344554444445566666554 47899


Q ss_pred             EEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEecc
Q psy7108         116 IMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQ  195 (703)
Q Consensus       116 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~  195 (703)
                      .++|.++.+.+.++.....                    . +.+  ++|++.|+.+..++.|.++|..+.+.+.++....
T Consensus       110 ~v~D~~t~~~~~ti~~~~e--------------------G-~gl--t~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~  166 (262)
T 3nol_A          110 FVWNIRNLRQVRSFNYDGE--------------------G-WGL--THNDQYLIMSDGTPVLRFLDPESLTPVRTITVTA  166 (262)
T ss_dssp             EEEETTTCCEEEEEECSSC--------------------C-CCE--EECSSCEEECCSSSEEEEECTTTCSEEEEEECEE
T ss_pred             EEEECccCcEEEEEECCCC--------------------c-eEE--ecCCCEEEEECCCCeEEEEcCCCCeEEEEEEecc
Confidence            9999999999998876321                    1 233  3567777777667889999999999988887543


Q ss_pred             CCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCC------------ccceEEEEEcCCC
Q psy7108         196 NKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKP------------EVRVFCVKFSPTG  263 (703)
Q Consensus       196 ~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h------------~~~V~~l~~spdg  263 (703)
                      +...   ...++.+.+. +|+ +++.....     ..|.+.|.++++....+.-.            ..-.+.++|+|++
T Consensus       167 ~g~~---~~~lNELe~~-~G~-lyan~w~~-----~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~  236 (262)
T 3nol_A          167 HGEE---LPELNELEWV-DGE-IFANVWQT-----NKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEH  236 (262)
T ss_dssp             TTEE---CCCEEEEEEE-TTE-EEEEETTS-----SEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTT
T ss_pred             CCcc---ccccceeEEE-CCE-EEEEEccC-----CeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCC
Confidence            2100   0134456665 665 44444322     37888999999876655431            2346899999999


Q ss_pred             CEEEEEeCC
Q psy7108         264 QAWVAATTE  272 (703)
Q Consensus       264 ~~l~s~s~D  272 (703)
                      +.|.+.+..
T Consensus       237 ~~lfVTGK~  245 (262)
T 3nol_A          237 HRLFVTGKL  245 (262)
T ss_dssp             TEEEEEETT
T ss_pred             CEEEEECCC
Confidence            888777743

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=98.53  E-value=6.6e-06  Score=81.19  Aligned_cols=185  Identities=9%  Similarity=0.068  Sum_probs=126.5

Q ss_pred             CeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEE-ECCCeEEEEEcCCCcEEE
Q psy7108          49 PVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVA-TLDGQLIMFDVESAAQVG  127 (703)
Q Consensus        49 ~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~-s~dg~I~vwd~~~~~~~~  127 (703)
                      -...+.|+.   +.++.+.+.+|.|+++|+++++.....  ...........++++.|... -.++.+.+||.++.+.+.
T Consensus        56 ftqGL~~~~---~~Ly~stG~~g~v~~iD~~Tgkv~~~~--l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~  130 (268)
T 3nok_A           56 FTQGLVFHQ---GHFFESTGHQGTLRQLSLESAQPVWME--RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRER  130 (268)
T ss_dssp             CEEEEEEET---TEEEEEETTTTEEEECCSSCSSCSEEE--ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEE
T ss_pred             ccceEEEEC---CEEEEEcCCCCEEEEEECCCCcEEeEE--CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEE
Confidence            347888874   677788888999999999999766666  33444443334455555444 458899999999999999


Q ss_pred             EEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccce
Q psy7108         128 SVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFIN  207 (703)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~  207 (703)
                      ++.....                    . +.++  +|++.|+.+..++.|.++|..+.+.+.++........   -..++
T Consensus       131 ti~~~~e--------------------G-wGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~---v~~lN  184 (268)
T 3nok_A          131 TTRYSGE--------------------G-WGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQP---VELIN  184 (268)
T ss_dssp             EEECSSC--------------------C-CCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEE---CCCEE
T ss_pred             EEeCCCc--------------------e-eEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcc---ccccc
Confidence            9876321                    1 2333  5688888877789999999999999888875432111   11345


Q ss_pred             eeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC-------------CccceEEEEEcCCCCEEEEEeC
Q psy7108         208 RRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK-------------PEVRVFCVKFSPTGQAWVAATT  271 (703)
Q Consensus       208 ~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~-------------h~~~V~~l~~spdg~~l~s~s~  271 (703)
                      .+.+. +|+ +++.....     ..|.+-|.++++.+..+.-             ...-.+.++++|+++.|...+.
T Consensus       185 eLe~~-dG~-lyanvw~s-----~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK  254 (268)
T 3nok_A          185 ELECA-NGV-IYANIWHS-----SDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK  254 (268)
T ss_dssp             EEEEE-TTE-EEEEETTC-----SEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred             ccEEe-CCE-EEEEECCC-----CeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence            56666 665 44444322     2788889999987655442             1235689999998877766653

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=98.51  E-value=6.1e-06  Score=87.65  Aligned_cols=197  Identities=12%  Similarity=0.070  Sum_probs=124.4

Q ss_pred             CCCEEE-EEeCCCcEEEEEcCCCc---eeEEEec--------CCCcEEEEEEecCCCEEEEEECC------CeEEEEEcC
Q psy7108          60 SSTGMV-SASWDKTVKLWNAVETD---TQHETIQ--------LLSDALCVAYKPDGTEIVVATLD------GQLIMFDVE  121 (703)
Q Consensus        60 dg~~L~-sgs~Dg~V~iWd~~~~~---~~~~~~~--------~~~~V~~v~~spdg~~las~s~d------g~I~vwd~~  121 (703)
                      ++++|+ +|..++.|.++|+.+..   .+.....        .......+..+|+| .++++..+      +.|.++|.+
T Consensus        94 ~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~  172 (462)
T 2ece_A           94 ERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHY  172 (462)
T ss_dssp             CSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTT
T ss_pred             cCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECC
Confidence            666665 55677899999986441   2233331        11245667889999 66666555      789999999


Q ss_pred             CCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe-------------------cCCcEEEEEC
Q psy7108         122 SAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG-------------------QSKYICIYSS  182 (703)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s-------------------~dg~I~lwD~  182 (703)
                      +.+.+.+++.....                 ...-..+-|+|+++.+++..                   .+.+|.+||+
T Consensus       173 T~~v~~~~~~~~~~-----------------~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~  235 (462)
T 2ece_A          173 SFEPLGKWEIDRGD-----------------QYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDL  235 (462)
T ss_dssp             TCCEEEECCSBCTT-----------------CCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEET
T ss_pred             CCeEEEEEccCCCC-----------------ccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEEC
Confidence            99999888643210                 01234578899999888874                   3678999999


Q ss_pred             CCCceEEEEEeccCCccccccccceee--eeccCCCEEEEEcccCCCCCeeEEECCCCCCCc--cceee--cC-------
Q psy7108         183 REGILLKKFTITQNKSLDGINDFINRR--KMTEFGNVSLIETRETHEGGNVVLKLPGVKKGD--MAARV--LK-------  249 (703)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~--~~~~~--~~-------  249 (703)
                      .+++.+.++.....      ......+  +++|++++.++++.-+..+....|.+|....++  ..+.+  ..       
T Consensus       236 ~~~k~~~tI~vg~~------g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~l  309 (462)
T 2ece_A          236 RKRKRIHSLTLGEE------NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNL  309 (462)
T ss_dssp             TTTEEEEEEESCTT------EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSC
T ss_pred             CCCcEeeEEecCCC------CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccc
Confidence            99888887764311      0122334  459999988887750000111345444332221  11110  00       


Q ss_pred             ---------CccceEEEEEcCCCCEEEEEeCCC--EEEEEcC
Q psy7108         250 ---------PEVRVFCVKFSPTGQAWVAATTEG--VHIYSLD  280 (703)
Q Consensus       250 ---------h~~~V~~l~~spdg~~l~s~s~Dg--v~iwd~~  280 (703)
                               -......+.+||||++|.++....  |.+||+.
T Consensus       310 p~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~  351 (462)
T 2ece_A          310 PEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDIS  351 (462)
T ss_dssp             CGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECS
T ss_pred             cccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEec
Confidence                     013477899999999997777654  9999985

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=98.51  E-value=3.7e-05  Score=76.62  Aligned_cols=192  Identities=11%  Similarity=0.060  Sum_probs=126.2

Q ss_pred             EEEecCCCc--EEEEEEecCCCEEEEEEC--CCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEE
Q psy7108          85 HETIQLLSD--ALCVAYKPDGTEIVVATL--DGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVC  160 (703)
Q Consensus        85 ~~~~~~~~~--V~~v~~spdg~~las~s~--dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~  160 (703)
                      .....|...  ...++|++|+...++.+.  ++.|.++|+.+++.+..+.-...                   .....++
T Consensus        12 v~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~-------------------~fgeGi~   72 (266)
T 2iwa_A           12 LNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDS-------------------YFGEGLT   72 (266)
T ss_dssp             EEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTT-------------------CCEEEEE
T ss_pred             EEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCC-------------------cceEEEE
Confidence            344455543  578999998754444443  57999999999999888763221                   0223455


Q ss_pred             EcCCCCEEEEE-ecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC
Q psy7108         161 YSADGSCILAA-GQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK  239 (703)
Q Consensus       161 ~spdg~~l~s~-s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~  239 (703)
                      +.  ++.|..+ -.++.+.++|..+.+.+.++... .  ..       ...+++||+.++++...      ..+.+.|..
T Consensus        73 ~~--g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g-~--~~-------g~glt~Dg~~l~vs~gs------~~l~viD~~  134 (266)
T 2iwa_A           73 LL--NEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQ-M--KD-------GWGLATDGKILYGSDGT------SILYEIDPH  134 (266)
T ss_dssp             EE--TTEEEEEETTCSEEEEEETTTTEEEEEEECC-S--SS-------CCEEEECSSSEEEECSS------SEEEEECTT
T ss_pred             Ee--CCEEEEEEecCCEEEEEECCCCcEEEEEECC-C--CC-------eEEEEECCCEEEEECCC------CeEEEEECC
Confidence            54  4455554 46789999999999999888643 1  11       24477788888876532      389999999


Q ss_pred             CCccceeecCCc-----cceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceeccee-------------------eeEEE
Q psy7108         240 KGDMAARVLKPE-----VRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPFL-------------------LDISI  294 (703)
Q Consensus       240 ~~~~~~~~~~h~-----~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~~-------------------~~~~~  294 (703)
                      +.+....+.-..     ..++.+.|. +|+..+....++ |.+.|..+++....+.                   ..+++
T Consensus       135 t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~  213 (266)
T 2iwa_A          135 TFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAW  213 (266)
T ss_dssp             TCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEE
T ss_pred             CCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEE
Confidence            887766655321     236788888 775444444445 9999999998755443                   35889


Q ss_pred             ccchhhhHhhcCCcceEEEE
Q psy7108         295 TPQSVKEALADKDYAKALMM  314 (703)
Q Consensus       295 spd~~~~~l~sg~~~~~l~l  314 (703)
                      +|++.+.++..+.+.....+
T Consensus       214 ~~~~~~lfVTgk~~~~v~~i  233 (266)
T 2iwa_A          214 DQENKRIFVTGKLWPKLFEI  233 (266)
T ss_dssp             ETTTTEEEEEETTCSEEEEE
T ss_pred             cCCCCEEEEECCCCCeEEEE
Confidence            99885544444444444333

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=98.49  E-value=4.4e-05  Score=76.51  Aligned_cols=202  Identities=9%  Similarity=-0.040  Sum_probs=124.7

Q ss_pred             cCeEEEEEcCCCCCCEEEE-EeCCCcEEEEEcCCCceeEEEec-CCCcEEEEEEecCCCEEEEEE-CCCeEEEEEcCCCc
Q psy7108          48 GPVSCIEFSPVLSSTGMVS-ASWDKTVKLWNAVETDTQHETIQ-LLSDALCVAYKPDGTEIVVAT-LDGQLIMFDVESAA  124 (703)
Q Consensus        48 ~~V~~l~~sp~~dg~~L~s-gs~Dg~V~iWd~~~~~~~~~~~~-~~~~V~~v~~spdg~~las~s-~dg~I~vwd~~~~~  124 (703)
                      ....+++|+|  ++..|+. -..++.|..++..+.. ...... .......++++|++..|+.+. ..+.|.+++++...
T Consensus        36 ~~~~gi~~d~--~~~~ly~~d~~~~~I~~~~~~g~~-~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~  112 (267)
T 1npe_A           36 KVIIGLAFDC--VDKVVYWTDISEPSIGRASLHGGE-PTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ  112 (267)
T ss_dssp             EEEEEEEEET--TTTEEEEEETTTTEEEEEESSSCC-CEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred             CcEEEEEEec--CCCEEEEEECCCCEEEEEecCCCC-cEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCC
Confidence            4578999999  6655554 4556889999987653 233332 235788999999876666554 46789999987543


Q ss_pred             EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec---CCcEEEEECCCCceEEEEEeccCCcccc
Q psy7108         125 QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ---SKYICIYSSREGILLKKFTITQNKSLDG  201 (703)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~---dg~I~lwD~~~~~~~~~~~~~~~~~~~~  201 (703)
                      ........                    ......++++|++..|..+..   .+.|..+++.... ...+... .     
T Consensus       113 ~~~~~~~~--------------------~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~-~-----  165 (267)
T 1npe_A          113 RRVLFDTG--------------------LVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQD-N-----  165 (267)
T ss_dssp             CEEEECSS--------------------CSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECT-T-----
T ss_pred             EEEEEECC--------------------CCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEEC-C-----
Confidence            22222111                    114678999997666665543   3678888876432 2222211 1     


Q ss_pred             ccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCC-C-EEEEEc
Q psy7108         202 INDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTE-G-VHIYSL  279 (703)
Q Consensus       202 ~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~D-g-v~iwd~  279 (703)
                       ......+++++++..++++....     ..|..+|............ ......++..  +..+..+... + |.+++.
T Consensus       166 -~~~P~gia~d~~~~~lyv~d~~~-----~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d--~~~lyva~~~~~~v~~~d~  236 (267)
T 1npe_A          166 -LGLPNGLTFDAFSSQLCWVDAGT-----HRAECLNPAQPGRRKVLEG-LQYPFAVTSY--GKNLYYTDWKTNSVIAMDL  236 (267)
T ss_dssp             -CSCEEEEEEETTTTEEEEEETTT-----TEEEEEETTEEEEEEEEEC-CCSEEEEEEE--TTEEEEEETTTTEEEEEET
T ss_pred             -CCCCcEEEEcCCCCEEEEEECCC-----CEEEEEecCCCceEEEecC-CCCceEEEEe--CCEEEEEECCCCeEEEEeC
Confidence             12457899999888777665432     3788888765433222222 2234566653  5566555544 4 999999


Q ss_pred             CCCceecce
Q psy7108         280 DSGYVFDPF  288 (703)
Q Consensus       280 ~~~~~~~~~  288 (703)
                      .+++....+
T Consensus       237 ~~g~~~~~i  245 (267)
T 1npe_A          237 AISKEMDTF  245 (267)
T ss_dssp             TTTEEEEEE
T ss_pred             CCCCceEEE
Confidence            888765443

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=98.48  E-value=1.9e-06  Score=90.84  Aligned_cols=239  Identities=10%  Similarity=0.006  Sum_probs=135.1

Q ss_pred             EEEEEeCCC----cEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEE----------CCCeEEEEEcCCCcEEEE
Q psy7108          63 GMVSASWDK----TVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVAT----------LDGQLIMFDVESAAQVGS  128 (703)
Q Consensus        63 ~L~sgs~Dg----~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s----------~dg~I~vwd~~~~~~~~~  128 (703)
                      .+++...++    +|.+.|..+++.+..+.....+  .++++||++.++++.          .++.|.+||+.+++.+.+
T Consensus        34 ~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~  111 (368)
T 1mda_H           34 SHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIAD  111 (368)
T ss_dssp             EEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEE
T ss_pred             EEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEE
Confidence            444444455    7889999988766665555555  799999999998886          368899999999999998


Q ss_pred             EeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec--CCcEEE--EECCCCceEEEEEeccCCccccccc
Q psy7108         129 VEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ--SKYICI--YSSREGILLKKFTITQNKSLDGIND  204 (703)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~--dg~I~l--wD~~~~~~~~~~~~~~~~~~~~~~~  204 (703)
                      +......   +.          ........++++|||++++++..  +..+.+  +|+.+   +.++.......+.. ..
T Consensus       112 I~v~~~~---~~----------~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p-~g  174 (368)
T 1mda_H          112 IELPDAP---RF----------SVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHP-GA  174 (368)
T ss_dssp             EEETTSC---SC----------CBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEE-EE
T ss_pred             EECCCcc---cc----------ccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEcc-CC
Confidence            8643100   00          00002346899999999998864  456888  99876   44443211100000 00


Q ss_pred             cceeeeeccCCCEEEEEccc-----CCC-------------------CCe------eEEECCCCCCCc--cceeec----
Q psy7108         205 FINRRKMTEFGNVSLIETRE-----THE-------------------GGN------VVLKLPGVKKGD--MAARVL----  248 (703)
Q Consensus       205 ~v~~~~~spdg~~l~~~~~~-----~~~-------------------~~~------~~i~iwd~~~~~--~~~~~~----  248 (703)
                      .-.-++++++|+...+....     +..                   ++.      ..+.+.|..+..  ....+.    
T Consensus       175 ~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~~~V~viD~~~~~~~v~~~~~~~~~  254 (368)
T 1mda_H          175 AATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNES  254 (368)
T ss_dssp             TTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBSSCCEEEECCSSCCEEECCCCSSCT
T ss_pred             CeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEcCCEEEEEECCCCcceEEEEEEeccc
Confidence            01113344455444433321     000                   000      012222322111  000000    


Q ss_pred             ---CCc---cceEEEEEcCCCCEEEEEeC----------CCEEEEEcCCCceeccee-----eeEEEccchhhhHhhcCC
Q psy7108         249 ---KPE---VRVFCVKFSPTGQAWVAATT----------EGVHIYSLDSGYVFDPFL-----LDISITPQSVKEALADKD  307 (703)
Q Consensus       249 ---~h~---~~V~~l~~spdg~~l~s~s~----------Dgv~iwd~~~~~~~~~~~-----~~~~~spd~~~~~l~sg~  307 (703)
                         .+.   .....++++||++.+..+..          +++.++|+.+.+.+..+.     ..+.++||+...+++...
T Consensus       255 ~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~  334 (368)
T 1mda_H          255 GRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSA  334 (368)
T ss_dssp             HHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEET
T ss_pred             cccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccC
Confidence               000   11112689999998875432          347799999998876654     568999998433333332


Q ss_pred             cceEEEEEEecCch
Q psy7108         308 YAKALMMSLKLNEQ  321 (703)
Q Consensus       308 ~~~~l~la~~l~~~  321 (703)
                      .++.+.+ +++...
T Consensus       335 ~~~~VsV-ID~~t~  347 (368)
T 1mda_H          335 GTEVLDI-YDAASD  347 (368)
T ss_dssp             TTTEEEE-EESSSC
T ss_pred             CCCeEEE-EECCCC
Confidence            4677776 666544

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=98.46  E-value=2.5e-05  Score=76.42  Aligned_cols=187  Identities=8%  Similarity=0.008  Sum_probs=123.6

Q ss_pred             cCeEEEEEcCCCCCCEEEEEeCCC--cEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEE-ECCCeEEEEEcCCCc
Q psy7108          48 GPVSCIEFSPVLSSTGMVSASWDK--TVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVA-TLDGQLIMFDVESAA  124 (703)
Q Consensus        48 ~~V~~l~~sp~~dg~~L~sgs~Dg--~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~-s~dg~I~vwd~~~~~  124 (703)
                      .-...+.|++   +.++.+.+.+|  .|+..|+.+++..... ............+++..|... -.++.+.++|.++.+
T Consensus        21 ~ftqGL~~~~---~~LyestG~~g~S~v~~vD~~tgkv~~~~-~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~   96 (243)
T 3mbr_X           21 AFTEGLFYLR---GHLYESTGETGRSSVRKVDLETGRILQRA-EVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLT   96 (243)
T ss_dssp             CCEEEEEEET---TEEEEEECCTTSCEEEEEETTTCCEEEEE-ECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTE
T ss_pred             cccccEEEEC---CEEEEECCCCCCceEEEEECCCCCEEEEE-eCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCc
Confidence            4466899985   56667777654  8999999998655444 333444444344445555544 458899999999999


Q ss_pred             EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccc
Q psy7108         125 QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGIND  204 (703)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~  204 (703)
                      .+.++.....                    . +.++  +|++.|+.+..++.|.++|..+.+.++++........-   .
T Consensus        97 ~~~ti~~~~~--------------------G-wglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~---~  150 (243)
T 3mbr_X           97 PRARFRYPGE--------------------G-WALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPL---D  150 (243)
T ss_dssp             EEEEEECSSC--------------------C-CEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEEC---C
T ss_pred             EEEEEeCCCC--------------------c-eEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCccc---c
Confidence            9998876421                    2 3444  56777777777889999999999998888754321110   1


Q ss_pred             cceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC-------------CccceEEEEEcCCCCEEEEEeC
Q psy7108         205 FINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK-------------PEVRVFCVKFSPTGQAWVAATT  271 (703)
Q Consensus       205 ~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~-------------h~~~V~~l~~spdg~~l~s~s~  271 (703)
                      .++.+.+. +|+. ++.....     ..|.+.|.++++.+..+.-             ...-.+.++++|+++.|...+.
T Consensus       151 ~lNeLe~~-~G~l-yanvw~s-----~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK  223 (243)
T 3mbr_X          151 NLNELEWV-NGEL-LANVWLT-----SRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK  223 (243)
T ss_dssp             CEEEEEEE-TTEE-EEEETTT-----TEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred             cceeeEEe-CCEE-EEEECCC-----CeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence            34445544 5654 4433221     2688889999877655441             1234689999999888876664

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=98.42  E-value=2.1e-05  Score=77.52  Aligned_cols=193  Identities=11%  Similarity=0.092  Sum_probs=127.9

Q ss_pred             eEEEecCCCcE--EEEEEecCCCEEEEEECCC--eEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEE
Q psy7108          84 QHETIQLLSDA--LCVAYKPDGTEIVVATLDG--QLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTV  159 (703)
Q Consensus        84 ~~~~~~~~~~V--~~v~~spdg~~las~s~dg--~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i  159 (703)
                      +.....|....  ..+.|+ ++.+..+.+.+|  .|+++|+++++.+..+......                   .-..+
T Consensus        33 vv~~~phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~-------------------FgeGi   92 (262)
T 3nol_A           33 IVHSYPHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRY-------------------FGEGI   92 (262)
T ss_dssp             EEEEEECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTC-------------------CEEEE
T ss_pred             EEEEecCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCcc-------------------ceeEE
Confidence            34444565543  678998 676667777766  8999999999998887653320                   11234


Q ss_pred             EEcCCCCEEEEE-ecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCC
Q psy7108         160 CYSADGSCILAA-GQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGV  238 (703)
Q Consensus       160 ~~spdg~~l~s~-s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~  238 (703)
                      +.  +++.|... -.++.+.+||..+.+.+.++....           ....+++|++.++.+...      ..|.++|.
T Consensus        93 t~--~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~-----------eG~glt~dg~~L~~SdGs------~~i~~iDp  153 (262)
T 3nol_A           93 SD--WKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDG-----------EGWGLTHNDQYLIMSDGT------PVLRFLDP  153 (262)
T ss_dssp             EE--ETTEEEEEESSSSEEEEEETTTCCEEEEEECSS-----------CCCCEEECSSCEEECCSS------SEEEEECT
T ss_pred             EE--eCCEEEEEEeeCCEEEEEECccCcEEEEEECCC-----------CceEEecCCCEEEEECCC------CeEEEEcC
Confidence            43  35555554 457899999999999999987532           224555788877776533      37999999


Q ss_pred             CCCccceeecCC--c---cceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceeccee------------------eeEEE
Q psy7108         239 KKGDMAARVLKP--E---VRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPFL------------------LDISI  294 (703)
Q Consensus       239 ~~~~~~~~~~~h--~---~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~~------------------~~~~~  294 (703)
                      .+.+....+.-.  .   ..++.+.|. +|+..+..-.+. |.+.|..+++....+.                  ..+++
T Consensus       154 ~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~  232 (262)
T 3nol_A          154 ESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAW  232 (262)
T ss_dssp             TTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEE
T ss_pred             CCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEE
Confidence            998877665432  1   335567776 676444443444 9999999988754332                  34788


Q ss_pred             ccchhhhHhhcCCcceEEEEEE
Q psy7108         295 TPQSVKEALADKDYAKALMMSL  316 (703)
Q Consensus       295 spd~~~~~l~sg~~~~~l~la~  316 (703)
                      +|++.+.++..+.+.....+.+
T Consensus       233 dp~~~~lfVTGK~Wp~~~ev~~  254 (262)
T 3nol_A          233 DKEHHRLFVTGKLWPKVFEITL  254 (262)
T ss_dssp             ETTTTEEEEEETTCSEEEEEEE
T ss_pred             cCCCCEEEEECCCCCceEEEEE
Confidence            8877555566666666655533

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=98.35  E-value=4.4e-08  Score=104.04  Aligned_cols=174  Identities=7%  Similarity=0.008  Sum_probs=88.7

Q ss_pred             ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCC-cEE-EEEEecCCC
Q psy7108          28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLS-DAL-CVAYKPDGT  104 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~-~V~-~v~~spdg~  104 (703)
                      +..|| .+|+++  ..+..  +++.+..+.+  ++..+++++.||.|+.||..+++.......+.. .+. +..+. ++.
T Consensus        21 v~a~d~~tG~~~--W~~~~--~~~~s~p~~~--~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~-~~~   93 (369)
T 2hz6_A           21 LHAVSKRTGSIK--WTLKE--DPVLQVPTHV--EEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRS-SDG   93 (369)
T ss_dssp             EEEEETTTCCEE--EEEEC--CCSCCCC-------CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC-----
T ss_pred             EEEEECCCCCEE--EEecC--CCceecceEc--CCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEe-cCC
Confidence            33455 588887  56655  4555555666  777888888999999999988765443322111 110 01111 345


Q ss_pred             EEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCC
Q psy7108         105 EIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSRE  184 (703)
Q Consensus       105 ~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~  184 (703)
                      .+++++.|+.|+.||.++|+.+..+..+.                        ...++|++..+++++.|+.|+.||.++
T Consensus        94 ~v~~g~~dg~v~a~D~~tG~~~w~~~~~~------------------------~~~~~p~~~~v~~~~~dg~v~a~d~~t  149 (369)
T 2hz6_A           94 ILYMGKKQDIWYVIDLLTGEKQQTLSSAF------------------------ADSLSPSTSLLYLGRTEYTITMYDTKT  149 (369)
T ss_dssp             -CCCCEEEEEEEEECCC----------------------------------------------EEEEEEEEEEECCCSSS
T ss_pred             EEEEEeCCCEEEEEECCCCcEEEEecCCC------------------------cccccccCCEEEEEecCCEEEEEECCC
Confidence            67788889999999999998876665432                        123456788899999999999999999


Q ss_pred             CceEEEEEeccCCccccccccceeeeeccCC---CEEEEEcccCCCCCeeEEECCCCCCCccceeec
Q psy7108         185 GILLKKFTITQNKSLDGINDFINRRKMTEFG---NVSLIETRETHEGGNVVLKLPGVKKGDMAARVL  248 (703)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg---~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~  248 (703)
                      ++.+..+....          ....+++++.   ..+++++.++      .+..||.++|+.+....
T Consensus       150 G~~~W~~~~~~----------~~~~~~~~~~~~~~~v~~~~~dg------~v~a~d~~tG~~~W~~~  200 (369)
T 2hz6_A          150 RELRWNATYFD----------YAASLPEDDVDYKMSHFVSNGDG------LVVTVDSESGDVLWIQN  200 (369)
T ss_dssp             SSCCCEEEEEE----------ECCBCCCCCTTCCCCEEEEETSC------EEEEECTTTCCEEEEEE
T ss_pred             CCEEEeEeccc----------ccCccccCCccccceEEEECCCC------EEEEEECCCCcEEEEec
Confidence            98766554221          1223333331   3344444432      78999998887655443

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=98.29  E-value=6.9e-06  Score=90.31  Aligned_cols=185  Identities=7%  Similarity=-0.006  Sum_probs=118.2

Q ss_pred             cCeEEEEE-c-CCCCCCEEEEEe------------------CCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEE
Q psy7108          48 GPVSCIEF-S-PVLSSTGMVSAS------------------WDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIV  107 (703)
Q Consensus        48 ~~V~~l~~-s-p~~dg~~L~sgs------------------~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~la  107 (703)
                      .....+++ + |  ++.+++.++                  .++.+.+.|.++.+...++.-.. ....++++|||++++
T Consensus       134 ~~phg~~~~~~p--~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~  210 (595)
T 1fwx_A          134 KGIHGLRPQKWP--RSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAF  210 (595)
T ss_dssp             CSEEEEEECCSS--BCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEE
T ss_pred             CCCcceeeeecC--CCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEE
Confidence            45778888 5 8  899988884                  24578899998875555544323 456788999999999


Q ss_pred             EEECCC---------------eEEEEE-----------------------cCC--CcE-EEEEeccccCCCCCCCCccch
Q psy7108         108 VATLDG---------------QLIMFD-----------------------VES--AAQ-VGSVEARRDLDSGRLDTDLVT  146 (703)
Q Consensus       108 s~s~dg---------------~I~vwd-----------------------~~~--~~~-~~~~~~~~~~~~~~~~~~~~~  146 (703)
                      +++.+.               .|.+.|                       ..+  ++. +..+...              
T Consensus       211 vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg--------------  276 (595)
T 1fwx_A          211 STSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIA--------------  276 (595)
T ss_dssp             EEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEE--------------
T ss_pred             EEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecC--------------
Confidence            888653               244444                       333  211 2222211              


Q ss_pred             hhcccCCccEEEEEEcCCCCEEEEEe-cCCcEEEEECCCCc------------eEEEEEeccCCccccccccceeeeecc
Q psy7108         147 REQSLKAKAVSTVCYSADGSCILAAG-QSKYICIYSSREGI------------LLKKFTITQNKSLDGINDFINRRKMTE  213 (703)
Q Consensus       147 ~~~~~~~~~V~~i~~spdg~~l~s~s-~dg~I~lwD~~~~~------------~~~~~~~~~~~~~~~~~~~v~~~~~sp  213 (703)
                             ....++.++|||+++++++ .+.+|.++|+.+.+            ......  .       ......++|+|
T Consensus       277 -------~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~--v-------G~gP~h~aF~~  340 (595)
T 1fwx_A          277 -------NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE--L-------GLGPLHTAFDG  340 (595)
T ss_dssp             -------SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB--C-------CSCEEEEEECT
T ss_pred             -------CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC--C-------CCCcceEEECC
Confidence                   1356789999999988765 56789999998652            112111  1       12456789999


Q ss_pred             CCCEEEEEcccCCCCCeeEEECCCCCC----------CccceeecCCccc-----eEEEEEcCCCCEEEEEeC
Q psy7108         214 FGNVSLIETRETHEGGNVVLKLPGVKK----------GDMAARVLKPEVR-----VFCVKFSPTGQAWVAATT  271 (703)
Q Consensus       214 dg~~l~~~~~~~~~~~~~~i~iwd~~~----------~~~~~~~~~h~~~-----V~~l~~spdg~~l~s~s~  271 (703)
                      +| .++++..-+     ..|..||+.+          .+.+.++..|-.+     -.++.++|||++|+++..
T Consensus       341 dG-~aY~t~~ld-----sqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk  407 (595)
T 1fwx_A          341 RG-NAYTSLFLD-----SQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSK  407 (595)
T ss_dssp             TS-EEEEEETTT-----TEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred             CC-eEEEEEecC-----CcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCC
Confidence            99 655554332     3788899876          3444455444221     122355899999988764

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=98.26  E-value=2.9e-05  Score=85.31  Aligned_cols=186  Identities=9%  Similarity=0.020  Sum_probs=125.8

Q ss_pred             CCCEEEEEeC-CCcEEEEEcCCCceeEEE-ecCCCcEEEEEE-e-cCCCEEEEEEC------------------CCeEEE
Q psy7108          60 SSTGMVSASW-DKTVKLWNAVETDTQHET-IQLLSDALCVAY-K-PDGTEIVVATL------------------DGQLIM  117 (703)
Q Consensus        60 dg~~L~sgs~-Dg~V~iWd~~~~~~~~~~-~~~~~~V~~v~~-s-pdg~~las~s~------------------dg~I~v  117 (703)
                      ||+++..+.. ++.|.+-|+.+.++...+ .........+++ + |+++++++++.                  ++.+.+
T Consensus       100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv  179 (595)
T 1fwx_A          100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA  179 (595)
T ss_dssp             EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred             CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence            5677766654 556999999988654433 223456889998 5 99999988852                  457999


Q ss_pred             EEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCC----------------------
Q psy7108         118 FDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSK----------------------  175 (703)
Q Consensus       118 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg----------------------  175 (703)
                      .|.++.+...++.-...                     ...++++|||+++++++.+.                      
T Consensus       180 ID~~t~~v~~qI~Vgg~---------------------pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~  238 (595)
T 1fwx_A          180 VDADKWEVAWQVLVSGN---------------------LDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNI  238 (595)
T ss_dssp             EETTTTEEEEEEEESSC---------------------CCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEH
T ss_pred             EECCCCeEEEEEEeCCC---------------------ccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeec
Confidence            99999988877764221                     23466788888887776432                      


Q ss_pred             ----------------cEEEEECCC--Cce-EEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECC
Q psy7108         176 ----------------YICIYSSRE--GIL-LKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLP  236 (703)
Q Consensus       176 ----------------~I~lwD~~~--~~~-~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iw  236 (703)
                                      .|.+.|.++  ++. +..+....         ...++.++|||++++++....     ..|.++
T Consensus       239 ~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~---------~PhGv~~sPDGk~v~V~~~~s-----~~VsVi  304 (595)
T 1fwx_A          239 AEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIAN---------NPHGCNMAPDKKHLCVAGKLS-----PTVTVL  304 (595)
T ss_dssp             HHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEES---------SCCCEEECTTSSEEEEECTTS-----SBEEEE
T ss_pred             cceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecCC---------CceEEEEcCCCCEEEEeCCCC-----CeEEEE
Confidence                            366677766  433 34443221         345689999999998877543     378999


Q ss_pred             CCCCCcc-----------ceeecCCccceEEEEEcCCCCEE-EEEeCCC-EEEEEcCC
Q psy7108         237 GVKKGDM-----------AARVLKPEVRVFCVKFSPTGQAW-VAATTEG-VHIYSLDS  281 (703)
Q Consensus       237 d~~~~~~-----------~~~~~~h~~~V~~l~~spdg~~l-~s~s~Dg-v~iwd~~~  281 (703)
                      |+.+.+.           +.....-......++|+|+| .+ ++.--|+ |.+|++++
T Consensus       305 d~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~  361 (595)
T 1fwx_A          305 DVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIED  361 (595)
T ss_dssp             EGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTS-EEEEEETTTTEEEEEEHHH
T ss_pred             ECcccccccccccCcccceEEEcCCCCCcceEEECCCC-eEEEEEecCCcEEEEEhhH
Confidence            9886531           11111223457899999999 55 4555567 99999876

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=98.21  E-value=3.8e-05  Score=79.08  Aligned_cols=207  Identities=13%  Similarity=0.025  Sum_probs=126.0

Q ss_pred             ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEE
Q psy7108          28 VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIV  107 (703)
Q Consensus        28 v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~la  107 (703)
                      +..+|.+|+.+  ..+..+..........    +..+..++.++.+..+|.. +............+.++...+++. +.
T Consensus        80 l~~~d~~g~~~--~~~~~~~~~~~~~~~~----~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~  151 (330)
T 3hxj_A           80 VYAINPDGTEK--WRFDTKKAIVSDFTIF----EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IY  151 (330)
T ss_dssp             EEEECCCGGGG--GGSCC-----CCEEEE----TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EE
T ss_pred             EEEECCCCcEE--EEEECCCCcccCceEE----CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EE
Confidence            33445566655  4444333333333332    3567778888999999987 655444444444556677777776 55


Q ss_pred             EEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCce
Q psy7108         108 VATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGIL  187 (703)
Q Consensus       108 s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~  187 (703)
                      .++.++.|..+|.. ++....+.....                    .+.++...+++...+ ++  +.+..+| .+++.
T Consensus       152 vgt~~~~l~~~d~~-g~~~~~~~~~~~--------------------~~~~~~~d~~g~l~v-~t--~~l~~~d-~~g~~  206 (330)
T 3hxj_A          152 VGSNDNYLYAINPD-GTEKWRFKTNDA--------------------ITSAASIGKDGTIYF-GS--DKVYAIN-PDGTE  206 (330)
T ss_dssp             EECTTSEEEEECTT-SCEEEEEECSSC--------------------CCSCCEECTTCCEEE-ES--SSEEEEC-TTSCE
T ss_pred             EEcCCCEEEEECCC-CCEeEEEecCCC--------------------ceeeeEEcCCCEEEE-Ee--CEEEEEC-CCCcE
Confidence            67778999999998 777666553322                    455666777887554 44  7899999 77766


Q ss_pred             EEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEE
Q psy7108         188 LKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWV  267 (703)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~  267 (703)
                      ...+....        ..+.++...++|...+.+...       .+..+|. +++...........+.++...+++. +.
T Consensus       207 ~~~~~~~~--------~~~~~~~~~~~g~l~v~t~~~-------gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g~-l~  269 (330)
T 3hxj_A          207 KWNFYAGY--------WTVTRPAISEDGTIYVTSLDG-------HLYAINP-DGTEKWRFKTGKRIESSPVIGNTDT-IY  269 (330)
T ss_dssp             EEEECCSS--------CCCSCCEECTTSCEEEEETTT-------EEEEECT-TSCEEEEEECSSCCCSCCEECTTSC-EE
T ss_pred             EEEEccCC--------cceeceEECCCCeEEEEcCCC-------eEEEECC-CCCEeEEeeCCCCccccceEcCCCe-EE
Confidence            65554322        256778888888765544322       3555664 4554444444433344556666664 56


Q ss_pred             EEeCCC-EEEEEcCCCcee
Q psy7108         268 AATTEG-VHIYSLDSGYVF  285 (703)
Q Consensus       268 s~s~Dg-v~iwd~~~~~~~  285 (703)
                      .++.+| +..++. +++..
T Consensus       270 v~t~~ggl~~~d~-~g~~~  287 (330)
T 3hxj_A          270 FGSYDGHLYAINP-DGTEK  287 (330)
T ss_dssp             EECTTCEEEEECT-TSCEE
T ss_pred             EecCCCCEEEECC-CCcEE
Confidence            677776 988985 55544

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=98.19  E-value=4.3e-05  Score=78.74  Aligned_cols=205  Identities=10%  Similarity=-0.001  Sum_probs=128.5

Q ss_pred             ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEE
Q psy7108          28 VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIV  107 (703)
Q Consensus        28 v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~la  107 (703)
                      +..+|..|+..  .....+...+.++...+  ++. +..++.++.+..+|.. +............+.++...+++...+
T Consensus       119 l~~~d~~g~~~--~~~~~~~~~~~~~~~~~--~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v  192 (330)
T 3hxj_A          119 LYAINTDGTEK--WRFKTKKAIYATPIVSE--DGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYF  192 (330)
T ss_dssp             EEEECTTSCEE--EEEECSSCCCSCCEECT--TSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEE
T ss_pred             EEEEcCCCCEE--EEEcCCCceeeeeEEcC--CCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEE
Confidence            34455456655  44444555667777776  666 5567778899999987 655444444455567777777887544


Q ss_pred             EEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCce
Q psy7108         108 VATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGIL  187 (703)
Q Consensus       108 s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~  187 (703)
                       ++  +.|..+| .+++.........                    ..+.++...++|. |..++.++.+..+|. ++..
T Consensus       193 -~t--~~l~~~d-~~g~~~~~~~~~~--------------------~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~  246 (330)
T 3hxj_A          193 -GS--DKVYAIN-PDGTEKWNFYAGY--------------------WTVTRPAISEDGT-IYVTSLDGHLYAINP-DGTE  246 (330)
T ss_dssp             -ES--SSEEEEC-TTSCEEEEECCSS--------------------CCCSCCEECTTSC-EEEEETTTEEEEECT-TSCE
T ss_pred             -Ee--CEEEEEC-CCCcEEEEEccCC--------------------cceeceEECCCCe-EEEEcCCCeEEEECC-CCCE
Confidence             44  8899999 7777665554322                    1466777888876 555666788888884 5656


Q ss_pred             EEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEE
Q psy7108         188 LKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWV  267 (703)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~  267 (703)
                      +..+.....        .+.++...+++.. .+++.++      .+..+|. +++...........+.++...++|+ |.
T Consensus       247 ~~~~~~~~~--------~~~~~~~~~~g~l-~v~t~~g------gl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~-l~  309 (330)
T 3hxj_A          247 KWRFKTGKR--------IESSPVIGNTDTI-YFGSYDG------HLYAINP-DGTEKWNFETGSWIIATPVIDENGT-IY  309 (330)
T ss_dssp             EEEEECSSC--------CCSCCEECTTSCE-EEECTTC------EEEEECT-TSCEEEEEECSSCCCSCCEECTTCC-EE
T ss_pred             eEEeeCCCC--------ccccceEcCCCeE-EEecCCC------CEEEECC-CCcEEEEEEcCCccccceEEcCCCE-EE
Confidence            555543221        2334555666654 4444432      4777785 6666555554555677777778876 55


Q ss_pred             EEeCCC-EEEEEcCC
Q psy7108         268 AATTEG-VHIYSLDS  281 (703)
Q Consensus       268 s~s~Dg-v~iwd~~~  281 (703)
                      .++.+| +++...+.
T Consensus       310 ~gt~~G~~~~~~~~~  324 (330)
T 3hxj_A          310 FGTRNGKFYALFNLE  324 (330)
T ss_dssp             EECTTSCEEEEEC--
T ss_pred             EEcCCCeEEEEeccc
Confidence            678888 77766543

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=98.19  E-value=4.3e-05  Score=87.56  Aligned_cols=207  Identities=10%  Similarity=0.063  Sum_probs=135.5

Q ss_pred             CCcEEEEEcCCCceeEEEecCCCc--------------------------------EEEEEEecCCCEEEEEECCC----
Q psy7108          70 DKTVKLWNAVETDTQHETIQLLSD--------------------------------ALCVAYKPDGTEIVVATLDG----  113 (703)
Q Consensus        70 Dg~V~iWd~~~~~~~~~~~~~~~~--------------------------------V~~v~~spdg~~las~s~dg----  113 (703)
                      ++.|+.+|..+++...........                                ...++++|++..++.++.++    
T Consensus       189 ~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~  268 (677)
T 1kb0_A          189 RGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWS  268 (677)
T ss_dssp             BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSC
T ss_pred             CCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCcccc
Confidence            689999999999876655432211                                12578899999998887664    


Q ss_pred             ---------------eEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCC---CEEEEEecCC
Q psy7108         114 ---------------QLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADG---SCILAAGQSK  175 (703)
Q Consensus       114 ---------------~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg---~~l~s~s~dg  175 (703)
                                     .|..+|.++|+.+-.++....-   ....+       ... ....+....+|   ..+++++.+|
T Consensus       269 ~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d---~wd~~-------~~~-~p~l~~~~~dG~~~~~l~~~~~~G  337 (677)
T 1kb0_A          269 HKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGD---NWDYT-------STQ-PMILADIKIAGKPRKVILHAPKNG  337 (677)
T ss_dssp             HHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTC---CSCCC-------CCS-CCEEEEEEETTEEEEEEEECCTTS
T ss_pred             CCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCc---ccccc-------cCC-CcEEEecccCCcEeeEEEEECCCC
Confidence                           5999999999998777642210   00000       001 12223334477   6788899999


Q ss_pred             cEEEEECCCCceEEEEEeccCCc---c-------------------------ccccccceeeeeccCCCEEEEEccc---
Q psy7108         176 YICIYSSREGILLKKFTITQNKS---L-------------------------DGINDFINRRKMTEFGNVSLIETRE---  224 (703)
Q Consensus       176 ~I~lwD~~~~~~~~~~~~~~~~~---~-------------------------~~~~~~v~~~~~spdg~~l~~~~~~---  224 (703)
                      .++++|.++|+.+..+......-   +                         .+.. .-..++++|++..+++...+   
T Consensus       338 ~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~-~w~~~a~dp~~~~~yv~~~~~~~  416 (677)
T 1kb0_A          338 FFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAH-NWHPMSFNPQTGLVYLPAQNVPV  416 (677)
T ss_dssp             EEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSS-CSSCCEEETTTTEEEEEEEECCC
T ss_pred             EEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCccccc-CCCCceEcCCCCEEEEeChhcce
Confidence            99999999999987765322100   0                         0000 01257889998888775431   


Q ss_pred             ----------C-------------C-----------CCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEe
Q psy7108         225 ----------T-------------H-----------EGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAAT  270 (703)
Q Consensus       225 ----------~-------------~-----------~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s  270 (703)
                                +             .           ......|..||+.+++.+-+... ...+.+..++.++..+++++
T Consensus       417 ~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~-~~~~~~g~~~~~g~~v~~g~  495 (677)
T 1kb0_A          417 NLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEH-VSPWNGGTLTTAGNVVFQGT  495 (677)
T ss_dssp             EEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEE-SSSCCCCEEEETTTEEEEEC
T ss_pred             eeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCC-CCCCcCcceEeCCCEEEEEC
Confidence                      0             0           00125789999999987665542 23344555677888888899


Q ss_pred             CCC-EEEEEcCCCceeccee
Q psy7108         271 TEG-VHIYSLDSGYVFDPFL  289 (703)
Q Consensus       271 ~Dg-v~iwd~~~~~~~~~~~  289 (703)
                      .|+ +++||..+++.+..+.
T Consensus       496 ~dg~l~a~D~~tG~~lw~~~  515 (677)
T 1kb0_A          496 ADGRLVAYHAATGEKLWEAP  515 (677)
T ss_dssp             TTSEEEEEETTTCCEEEEEE
T ss_pred             CCCcEEEEECCCCceeeeee
Confidence            999 9999999999876654

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=98.17  E-value=0.00016  Score=71.27  Aligned_cols=191  Identities=9%  Similarity=0.033  Sum_probs=122.4

Q ss_pred             eEEEecCCCc--EEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEE
Q psy7108          84 QHETIQLLSD--ALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCY  161 (703)
Q Consensus        84 ~~~~~~~~~~--V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~  161 (703)
                      +.....|...  ...+.|+ ++.+..+.+.+|.|+++|+++++.+..+ -....                   .-..+++
T Consensus        45 Vv~~~phd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~-------------------FgeGit~  103 (268)
T 3nok_A           45 IIREYPHATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNI-------------------FAEGLAS  103 (268)
T ss_dssp             EEEEEECCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTC-------------------CEEEEEE
T ss_pred             EEEEEcCCCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCc-------------------ceeEEEE
Confidence            3344455544  4678887 4566677788899999999999987776 32210                   1233555


Q ss_pred             cCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC
Q psy7108         162 SADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG  241 (703)
Q Consensus       162 spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~  241 (703)
                      .. ++..+..-.++.+.+||..+.+.+.++.....           ...+++|++.++.+...      ..|.++|..+.
T Consensus       104 ~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~e-----------GwGLt~Dg~~L~vSdGs------~~l~~iDp~T~  165 (268)
T 3nok_A          104 DG-ERLYQLTWTEGLLFTWSGMPPQRERTTRYSGE-----------GWGLCYWNGKLVRSDGG------TMLTFHEPDGF  165 (268)
T ss_dssp             CS-SCEEEEESSSCEEEEEETTTTEEEEEEECSSC-----------CCCEEEETTEEEEECSS------SEEEEECTTTC
T ss_pred             eC-CEEEEEEccCCEEEEEECCcCcEEEEEeCCCc-----------eeEEecCCCEEEEECCC------CEEEEEcCCCC
Confidence            43 23344445678999999999999999875321           23445778888776643      38999999998


Q ss_pred             ccceeecCC--c---cceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceeccee-------------------eeEEEcc
Q psy7108         242 DMAARVLKP--E---VRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPFL-------------------LDISITP  296 (703)
Q Consensus       242 ~~~~~~~~h--~---~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~~-------------------~~~~~sp  296 (703)
                      +...++.-.  .   ..++.+.|. +|+..+..-.+. |.+.|..+++....+.                   ..++++|
T Consensus       166 ~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp  244 (268)
T 3nok_A          166 ALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEP  244 (268)
T ss_dssp             CEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECT
T ss_pred             eEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcC
Confidence            877665532  1   235677877 775444443444 9999999998754443                   2366776


Q ss_pred             chhhhHhhcCCcceEEEE
Q psy7108         297 QSVKEALADKDYAKALMM  314 (703)
Q Consensus       297 d~~~~~l~sg~~~~~l~l  314 (703)
                      ++.+.++.-+.+.....+
T Consensus       245 ~~~rlfVTGK~Wp~~~ev  262 (268)
T 3nok_A          245 GSGRIFMTGKLWPRLFEV  262 (268)
T ss_dssp             TTCCEEEEETTCSEEEEE
T ss_pred             CCCEEEEeCCCCCceEEE
Confidence            654444444444444443

>1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A*

Probab=98.15  E-value=1.3e-07  Score=99.85  Aligned_cols=105  Identities=37%  Similarity=0.604  Sum_probs=86.3

Q ss_pred             cchhhhhhcccccccceeecccCccccccCcccCcCCccceeeeecccchhhhhhhhcCCcccccccccccCCCCCCcCC
Q psy7108         414 LPPTLFARMRTRGYDIWLWNARGNVYSREHVNLTSEQNKFYRFSCDFNVYTLELISRLGPLRIKPKVEKMETGSSDEESS  493 (703)
Q Consensus       414 sl~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  493 (703)
                      .++..+++   +||+|+..|.||..+|..+..+.+....||.|+++                                  
T Consensus        82 ~~a~~l~~---~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~----------------------------------  124 (377)
T 1k8q_A           82 SLAFILAD---AGYDVWLGNSRGNTWARRNLYYSPDSVEFWAFSFD----------------------------------  124 (377)
T ss_dssp             CHHHHHHH---TTCEEEECCCTTSTTSCEESSSCTTSTTTTCCCHH----------------------------------
T ss_pred             cHHHHHHH---CCCCEEEecCCCCCCCCCCCCCCCCcccccCccHH----------------------------------
Confidence            45555664   89999999999999998887777777888988887                                  


Q ss_pred             CcccceeecccCcCCCCCCccccccCchhhhhcccCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhH
Q psy7108         494 KDDETEIRVLDEDVPRSSDTGDIQLKSTRMNELGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKV  573 (703)
Q Consensus       494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~  573 (703)
                                                     +...+|+.+.+++++...+..++.++|||+||..++..+.+.|+...++
T Consensus       125 -------------------------------~~~~~D~~~~i~~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~v  173 (377)
T 1k8q_A          125 -------------------------------EMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRI  173 (377)
T ss_dssp             -------------------------------HHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCHHHHTTE
T ss_pred             -------------------------------HHHhhhHHHHHHHHHHhcCcCceEEEEechhhHHHHHHHhcCchhhhhh
Confidence                                           6776799999999987767789999999999998887777777766688


Q ss_pred             HHhhhhhhhhhcc
Q psy7108         574 RLNVLWAQSAFLG  586 (703)
Q Consensus       574 ~~~~~~~p~~~~~  586 (703)
                      +.++..+|+....
T Consensus       174 ~~lvl~~~~~~~~  186 (377)
T 1k8q_A          174 KTFYALAPVATVK  186 (377)
T ss_dssp             EEEEEESCCSCCS
T ss_pred             hEEEEeCCchhcc
Confidence            8888888875544

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=98.12  E-value=0.00029  Score=68.86  Aligned_cols=191  Identities=8%  Similarity=-0.005  Sum_probs=122.0

Q ss_pred             eEEEecCCCc--EEEEEEecCCCEEEEEECC--CeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEE
Q psy7108          84 QHETIQLLSD--ALCVAYKPDGTEIVVATLD--GQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTV  159 (703)
Q Consensus        84 ~~~~~~~~~~--V~~v~~spdg~~las~s~d--g~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i  159 (703)
                      +.....|...  ...+.|++ +....+.+.+  ..|+.+|+.+++.+..+......                   .-..+
T Consensus        11 v~~~~phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~-------------------fgeGi   70 (243)
T 3mbr_X           11 VVKRYPHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPY-------------------FGAGI   70 (243)
T ss_dssp             EEEEEECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTC-------------------CEEEE
T ss_pred             EEEEcCCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCc-------------------ceeEE
Confidence            3344455543  56899986 5555666665  48999999999998887654320                   11233


Q ss_pred             EEcCCCCEEEE-EecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCC
Q psy7108         160 CYSADGSCILA-AGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGV  238 (703)
Q Consensus       160 ~~spdg~~l~s-~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~  238 (703)
                      +..  ++.|.. .-.++.+.+||..+.+.+.++....           ....++++++.++++...      ..|.++|.
T Consensus        71 ~~~--~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~-----------~Gwglt~dg~~L~vSdgs------~~l~~iDp  131 (243)
T 3mbr_X           71 VAW--RDRLIQLTWRNHEGFVYDLATLTPRARFRYPG-----------EGWALTSDDSHLYMSDGT------AVIRKLDP  131 (243)
T ss_dssp             EEE--TTEEEEEESSSSEEEEEETTTTEEEEEEECSS-----------CCCEEEECSSCEEEECSS------SEEEEECT
T ss_pred             EEe--CCEEEEEEeeCCEEEEEECCcCcEEEEEeCCC-----------CceEEeeCCCEEEEECCC------CeEEEEeC
Confidence            433  444444 4567899999999999999987532           123445678877776543      37999999


Q ss_pred             CCCccceeecCCc-----cceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceeccee-------------------eeEE
Q psy7108         239 KKGDMAARVLKPE-----VRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPFL-------------------LDIS  293 (703)
Q Consensus       239 ~~~~~~~~~~~h~-----~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~~-------------------~~~~  293 (703)
                      .+.+...++.-..     ..++.+.|. +|+.++..-.+. |.+.|..+++....+.                   ..++
T Consensus       132 ~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA  210 (243)
T 3mbr_X          132 DTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIA  210 (243)
T ss_dssp             TTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEE
T ss_pred             CCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEE
Confidence            9987766655321     245667765 666554443344 9999999988754433                   2367


Q ss_pred             EccchhhhHhhcCCcceEEEE
Q psy7108         294 ITPQSVKEALADKDYAKALMM  314 (703)
Q Consensus       294 ~spd~~~~~l~sg~~~~~l~l  314 (703)
                      ++|++.+.++..+.+.....+
T Consensus       211 ~d~~~~~lfVTGK~wp~~~~v  231 (243)
T 3mbr_X          211 FDAEHDRLFVTGKRWPMLYEI  231 (243)
T ss_dssp             EETTTTEEEEEETTCSEEEEE
T ss_pred             EcCCCCEEEEECCCCCcEEEE
Confidence            777664444444555555444

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=98.11  E-value=8.9e-05  Score=84.98  Aligned_cols=201  Identities=11%  Similarity=0.049  Sum_probs=128.3

Q ss_pred             EEEEEcCCCCCCEEEEEeCCC-------------------cEEEEEcCCCceeEEEec--CC-------CcEEEEEEecC
Q psy7108          51 SCIEFSPVLSSTGMVSASWDK-------------------TVKLWNAVETDTQHETIQ--LL-------SDALCVAYKPD  102 (703)
Q Consensus        51 ~~l~~sp~~dg~~L~sgs~Dg-------------------~V~iWd~~~~~~~~~~~~--~~-------~~V~~v~~spd  102 (703)
                      ..++++|  ++..++.++.++                   .|..+|..+++.......  |.       .....+....+
T Consensus       246 ~~~~~d~--~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~d  323 (677)
T 1kb0_A          246 DSMTFDA--ELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIA  323 (677)
T ss_dssp             SCEEEET--TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEET
T ss_pred             cceeEcC--CCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccC
Confidence            4678999  888888887664                   499999999976655443  21       12333444457


Q ss_pred             C---CEEEEEECCCeEEEEEcCCCcEEEEEeccccC------CCCCCCC---------ccchhhcccCCccEEEEEEcCC
Q psy7108         103 G---TEIVVATLDGQLIMFDVESAAQVGSVEARRDL------DSGRLDT---------DLVTREQSLKAKAVSTVCYSAD  164 (703)
Q Consensus       103 g---~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~------~~~~~~~---------~~~~~~~~~~~~~V~~i~~spd  164 (703)
                      |   ..+++++.+|.++++|.++|+.+.........      ..++...         .....+.......-..++++|+
T Consensus       324 G~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~  403 (677)
T 1kb0_A          324 GKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQ  403 (677)
T ss_dssp             TEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETT
T ss_pred             CcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCC
Confidence            8   67889999999999999999998776533210      0000000         0000000000011135788998


Q ss_pred             CCEEEEEec-------------------------------------------CCcEEEEECCCCceEEEEEeccCCcccc
Q psy7108         165 GSCILAAGQ-------------------------------------------SKYICIYSSREGILLKKFTITQNKSLDG  201 (703)
Q Consensus       165 g~~l~s~s~-------------------------------------------dg~I~lwD~~~~~~~~~~~~~~~~~~~~  201 (703)
                      +..+++...                                           .+.|..||+.+++.+-++....      
T Consensus       404 ~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~------  477 (677)
T 1kb0_A          404 TGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVS------  477 (677)
T ss_dssp             TTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESS------
T ss_pred             CCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCC------
Confidence            888877543                                           2779999999999887765321      


Q ss_pred             ccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCc-cceEEEEEcCCCCEEEE
Q psy7108         202 INDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPE-VRVFCVKFSPTGQAWVA  268 (703)
Q Consensus       202 ~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~-~~V~~l~~spdg~~l~s  268 (703)
                         .+....++.++..+++++.++      .++.||.++++.+..+.... ....-+.+.++|+.+++
T Consensus       478 ---~~~~g~~~~~g~~v~~g~~dg------~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~  536 (677)
T 1kb0_A          478 ---PWNGGTLTTAGNVVFQGTADG------RLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVS  536 (677)
T ss_dssp             ---SCCCCEEEETTTEEEEECTTS------EEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred             ---CCcCcceEeCCCEEEEECCCC------cEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEEE
Confidence               234455677788777776543      89999999999888776432 22334566788875543

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=98.10  E-value=0.00078  Score=68.87  Aligned_cols=205  Identities=11%  Similarity=0.022  Sum_probs=120.7

Q ss_pred             cCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECC--CeEEEEEcCCCcE
Q psy7108          48 GPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLD--GQLIMFDVESAAQ  125 (703)
Q Consensus        48 ~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~d--g~I~vwd~~~~~~  125 (703)
                      ....+++|+|  +++++++-..++.|..||....  ..........+..++++++|+.+++....  ..|..+|..+++.
T Consensus        32 ~~pegia~~~--~g~lyv~d~~~~~I~~~d~~g~--~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~  107 (306)
T 2p4o_A           32 TFLENLASAP--DGTIFVTNHEVGEIVSITPDGN--QQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTV  107 (306)
T ss_dssp             CCEEEEEECT--TSCEEEEETTTTEEEEECTTCC--EEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCE
T ss_pred             CCcceEEECC--CCCEEEEeCCCCeEEEECCCCc--eEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeE
Confidence            4577899999  8987777777889999987653  33344455678999999999965554332  2477778777765


Q ss_pred             EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCce-EEEEEeccC-Ccccccc
Q psy7108         126 VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGIL-LKKFTITQN-KSLDGIN  203 (703)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~-~~~~~~~~~-~~~~~~~  203 (703)
                      ........                   ......++..+++..+++-..++.|..+|..+++. +........ .......
T Consensus       108 ~~~~~~~~-------------------~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~  168 (306)
T 2p4o_A          108 ETLLTLPD-------------------AIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVF  168 (306)
T ss_dssp             EEEEECTT-------------------CSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCS
T ss_pred             EEEEeCCC-------------------ccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCC
Confidence            43322110                   01234455555555455444678899999876532 111111000 0000111


Q ss_pred             ccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCC-Ccc--ceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEc
Q psy7108         204 DFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKK-GDM--AARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSL  279 (703)
Q Consensus       204 ~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~-~~~--~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~  279 (703)
                      ...+.+  +++++.++++....     ..|..+|... ++.  ...+.. ......++++++|+.+++....+ |.+++.
T Consensus       169 ~~pngi--s~dg~~lyv~d~~~-----~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~~~~  240 (306)
T 2p4o_A          169 PAANGL--KRFGNFLYVSNTEK-----MLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVRIAP  240 (306)
T ss_dssp             CSEEEE--EEETTEEEEEETTT-----TEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEEECT
T ss_pred             CcCCCc--CcCCCEEEEEeCCC-----CEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeEEEECC
Confidence            123344  88888777665432     3788887764 321  111111 12356789999998766655555 999987


Q ss_pred             CCCce
Q psy7108         280 DSGYV  284 (703)
Q Consensus       280 ~~~~~  284 (703)
                      + ++.
T Consensus       241 ~-G~~  244 (306)
T 2p4o_A          241 D-RST  244 (306)
T ss_dssp             T-CCE
T ss_pred             C-CCE
Confidence            5 443

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=98.09  E-value=0.00011  Score=84.26  Aligned_cols=199  Identities=11%  Similarity=0.089  Sum_probs=126.3

Q ss_pred             EEEEEcCCCCCCEEEEEeCCCc-------------------EEEEEcCCCceeEEEec--CC-------CcEEEEEEecC
Q psy7108          51 SCIEFSPVLSSTGMVSASWDKT-------------------VKLWNAVETDTQHETIQ--LL-------SDALCVAYKPD  102 (703)
Q Consensus        51 ~~l~~sp~~dg~~L~sgs~Dg~-------------------V~iWd~~~~~~~~~~~~--~~-------~~V~~v~~spd  102 (703)
                      ..++++|  ++.+++.++.++.                   |..+|..+++.......  |.       ..+.......+
T Consensus       238 ~~~~~d~--~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~  315 (689)
T 1yiq_A          238 DSFAYDP--ELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPID  315 (689)
T ss_dssp             SCEEEET--TTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEET
T ss_pred             cceeEcC--CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccC
Confidence            3678999  8889999887764                   99999999987765543  21       12222333346


Q ss_pred             CC---EEEEEECCCeEEEEEcCCCcEEEEEecccc-CC------CCCCC------------CccchhhcccCCccEEEEE
Q psy7108         103 GT---EIVVATLDGQLIMFDVESAAQVGSVEARRD-LD------SGRLD------------TDLVTREQSLKAKAVSTVC  160 (703)
Q Consensus       103 g~---~las~s~dg~I~vwd~~~~~~~~~~~~~~~-~~------~~~~~------------~~~~~~~~~~~~~~V~~i~  160 (703)
                      |+   .++.++.+|.++++|.++|+.+...+.... ..      .++..            ......+..........++
T Consensus       316 G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a  395 (689)
T 1yiq_A          316 GKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMS  395 (689)
T ss_dssp             TEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCE
T ss_pred             CcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcce
Confidence            65   788899999999999999998865443220 00      00000            0000000000111123478


Q ss_pred             EcCCCCEEEEEec---------------------------------------------CCcEEEEECCCCceEEEEEecc
Q psy7108         161 YSADGSCILAAGQ---------------------------------------------SKYICIYSSREGILLKKFTITQ  195 (703)
Q Consensus       161 ~spdg~~l~s~s~---------------------------------------------dg~I~lwD~~~~~~~~~~~~~~  195 (703)
                      |+|+...+++...                                             +|.|..||+.+++.+-++..+.
T Consensus       396 ~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~  475 (689)
T 1yiq_A          396 YNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT  475 (689)
T ss_dssp             EETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS
T ss_pred             ECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCC
Confidence            8888877776532                                             3779999999999887766432


Q ss_pred             CCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCcc-ceEEEEEcCCCCEE
Q psy7108         196 NKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEV-RVFCVKFSPTGQAW  266 (703)
Q Consensus       196 ~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~-~V~~l~~spdg~~l  266 (703)
                               ......++..+..+++++.++      .++.||.++|+.+.++..+.. ...-+.|+.+|+..
T Consensus       476 ---------~~~~g~~~tagglvf~gt~dg------~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qy  532 (689)
T 1yiq_A          476 ---------IFNGGTLSTAGNLVFEGSADG------RVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQY  532 (689)
T ss_dssp             ---------SCCCCEEEETTTEEEEECTTS------EEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred             ---------CccCccceECCCEEEEECCCC------cEEEEECCCCccceeeeCCCCcccCceEEEECCEEE
Confidence                     223335666777777776553      899999999998877764432 22446777888754

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.08  E-value=0.00085  Score=71.20  Aligned_cols=221  Identities=7%  Similarity=-0.070  Sum_probs=127.9

Q ss_pred             ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEE-EEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEE
Q psy7108          28 VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMV-SASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEI  106 (703)
Q Consensus        28 v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~-sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~l  106 (703)
                      ++..+..+...  ..+........+++|++  .+..|+ +-...+.|..+++..................+++.+.+..|
T Consensus        98 I~~i~~~~~~~--~~~~~~~~~~~gl~~d~--~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~l  173 (386)
T 3v65_B           98 IRQVLPHRSEY--TLLLNNLENAIALDFHH--RRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKL  173 (386)
T ss_dssp             EEEECTTSCCC--EEEECSCSCEEEEEEET--TTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEE
T ss_pred             ceeeccCCCcE--EEEecCCCccEEEEEec--CCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeE
Confidence            44445455443  33333345678999998  555554 54566789899987654222222233455778899866665


Q ss_pred             EEE-ECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec-C-CcEEEEECC
Q psy7108         107 VVA-TLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ-S-KYICIYSSR  183 (703)
Q Consensus       107 as~-s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~-d-g~I~lwD~~  183 (703)
                      +.+ ...+.|.+.+++.......+....                    .....++++|.+..|..+.. . +.|..+++.
T Consensus       174 Y~~d~~~~~I~~~~~dg~~~~~l~~~~l--------------------~~P~giavdp~~g~ly~td~~~~~~I~r~~~d  233 (386)
T 3v65_B          174 YWTDSGTSRIEVANLDGAHRKVLLWQSL--------------------EKPRAIALHPMEGTIYWTDWGNTPRIEASSMD  233 (386)
T ss_dssp             EEEETTTTEEEECBTTSCSCEEEECSSC--------------------SCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred             EEEcCCCCeEEEEeCCCCceEEeecCCC--------------------CCCcEEEEEcCCCeEEEeccCCCCEEEEEeCC
Confidence            554 446788888887544333222211                    15688999997776665543 3 678888887


Q ss_pred             CCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCC
Q psy7108         184 EGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTG  263 (703)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg  263 (703)
                      .........  ..      ....+.++++|++..++++....     ..|..+|..................++++. .+
T Consensus       234 G~~~~~~~~--~~------~~~PnGlavd~~~~~lY~aD~~~-----~~I~~~d~dG~~~~~~~~~~~~~P~giav~-~~  299 (386)
T 3v65_B          234 GSGRRIIAD--TH------LFWPNGLTIDYAGRRMYWVDAKH-----HVIERANLDGSHRKAVISQGLPHPFAITVF-ED  299 (386)
T ss_dssp             SCSCEEEEC--SS------CSCEEEEEEEGGGTEEEEEETTT-----TEEEEECTTSCSCEEEECSSCSSEEEEEEE-TT
T ss_pred             CCCcEEEEE--CC------CCCeeeEEEeCCCCEEEEEECCC-----CEEEEEeCCCCeeEEEEECCCCCceEEEEE-CC
Confidence            543322221  11      12457899998777766654432     378888876433322232233456778873 33


Q ss_pred             CEEEEEeCCC-EEEEEcCCCceec
Q psy7108         264 QAWVAATTEG-VHIYSLDSGYVFD  286 (703)
Q Consensus       264 ~~l~s~s~Dg-v~iwd~~~~~~~~  286 (703)
                      ..+.+-...+ |..++..+|+...
T Consensus       300 ~ly~td~~~~~V~~~~~~~G~~~~  323 (386)
T 3v65_B          300 SLYWTDWHTKSINSANKFTGKNQE  323 (386)
T ss_dssp             EEEEEETTTTEEEEEETTTCCSCE
T ss_pred             EEEEeeCCCCeEEEEECCCCcceE
Confidence            3334444444 8888866665543

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=98.07  E-value=0.00054  Score=70.58  Aligned_cols=202  Identities=10%  Similarity=0.090  Sum_probs=122.4

Q ss_pred             CeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEec--------------------CCCcEEEEEEecCCCEEEE
Q psy7108          49 PVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQ--------------------LLSDALCVAYKPDGTEIVV  108 (703)
Q Consensus        49 ~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~--------------------~~~~V~~v~~spdg~~las  108 (703)
                      ...+++|++  ++++++++..++.|..|+..++. ......                    ....+.++++.+++..|++
T Consensus        20 ~p~~i~~d~--~g~~l~v~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v   96 (322)
T 2fp8_A           20 APNSFTFDS--TNKGFYTSVQDGRVIKYEGPNSG-FVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYI   96 (322)
T ss_dssp             CCCCEECCT--TCSSEEEECTTSEEEEECCTTTC-EEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEE
T ss_pred             CceEEEEcC--CCCEEEEEcCCCeEEEECCCCCc-eEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEE
Confidence            346788999  88878888888999999876653 222211                    1135788999983345666


Q ss_pred             EECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC-CCCEEEEEec--------------
Q psy7108         109 ATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA-DGSCILAAGQ--------------  173 (703)
Q Consensus       109 ~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp-dg~~l~s~s~--------------  173 (703)
                      +...+.|..+|..+++. ..+.....               .........+++.+ +|+..++-..              
T Consensus        97 ~d~~~~i~~~d~~~g~~-~~~~~~~~---------------~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~  160 (322)
T 2fp8_A           97 VDCYYHLSVVGSEGGHA-TQLATSVD---------------GVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDT  160 (322)
T ss_dssp             EETTTEEEEECTTCEEC-EEEESEET---------------TEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHH
T ss_pred             EECCCCEEEEeCCCCEE-EEecccCC---------------CCcccccceEEEecCCCEEEEECCcccccccccceehcc
Confidence            65566688888775532 22221100               00012467899999 9987766432              


Q ss_pred             ---CCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcc--ceeec
Q psy7108         174 ---SKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDM--AARVL  248 (703)
Q Consensus       174 ---dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~--~~~~~  248 (703)
                         ++.|..+|..+++....... .        ...+.++++|+|+.++++....     ..|..+++.....  ...+.
T Consensus       161 ~~~~g~v~~~d~~~~~~~~~~~~-~--------~~p~gia~~~dg~~lyv~d~~~-----~~I~~~~~~~~~~~~~~~~~  226 (322)
T 2fp8_A          161 SDKTGRLIKYDPSTKETTLLLKE-L--------HVPGGAEVSADSSFVLVAEFLS-----HQIVKYWLEGPKKGTAEVLV  226 (322)
T ss_dssp             TCCCEEEEEEETTTTEEEEEEEE-E--------SCCCEEEECTTSSEEEEEEGGG-----TEEEEEESSSTTTTCEEEEE
T ss_pred             cCCCceEEEEeCCCCEEEEeccC-C--------ccCcceEECCCCCEEEEEeCCC-----CeEEEEECCCCcCCccceEE
Confidence               36789999877754332211 0        1346789999999766654321     3677777664211  11111


Q ss_pred             CCccceEEEEEcCCCCEEEEEeC----------CC-EEEEEcCCCcee
Q psy7108         249 KPEVRVFCVKFSPTGQAWVAATT----------EG-VHIYSLDSGYVF  285 (703)
Q Consensus       249 ~h~~~V~~l~~spdg~~l~s~s~----------Dg-v~iwd~~~~~~~  285 (703)
                      ...+ ...++++++|++.++...          .+ |..++.+ ++.+
T Consensus       227 ~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~  272 (322)
T 2fp8_A          227 KIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNIL  272 (322)
T ss_dssp             ECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEE
T ss_pred             eCCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCC-CCEE
Confidence            1223 778999999987666544          23 6777754 4443

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=98.07  E-value=0.00012  Score=84.13  Aligned_cols=207  Identities=14%  Similarity=0.091  Sum_probs=132.8

Q ss_pred             CCcEEEEEcCCCceeEEEecCC-------------------------------CcEEEEEEecCCCEEEEEECCCe----
Q psy7108          70 DKTVKLWNAVETDTQHETIQLL-------------------------------SDALCVAYKPDGTEIVVATLDGQ----  114 (703)
Q Consensus        70 Dg~V~iWd~~~~~~~~~~~~~~-------------------------------~~V~~v~~spdg~~las~s~dg~----  114 (703)
                      +|.|+.||..+++.........                               .....++++|++..+++++.++.    
T Consensus       182 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~  261 (689)
T 1yiq_A          182 RGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDP  261 (689)
T ss_dssp             BCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred             CCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCcccc
Confidence            6899999999998766554211                               00125788999999999887764    


Q ss_pred             ---------------EEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCC---EEEEEecCCc
Q psy7108         115 ---------------LIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGS---CILAAGQSKY  176 (703)
Q Consensus       115 ---------------I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~---~l~s~s~dg~  176 (703)
                                     |..+|.++|+.+-.++....-        .+.   ..............+|+   .++.++.+|.
T Consensus       262 ~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d--------~wd---~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~  330 (689)
T 1yiq_A          262 KWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGD--------AWD---YTATQHMILAELPIDGKPRKVLMQAPKNGF  330 (689)
T ss_dssp             HHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTC--------CSC---CCCCSCEEEEEEEETTEEEEEEEECCTTSE
T ss_pred             CCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcc--------ccc---ccCCCCcEEEeeccCCcEEEEEEEECCCCe
Confidence                           999999999998877643110        000   00011222222233565   7888999999


Q ss_pred             EEEEECCCCceEEEEEeccCC-----------c---------c-c-----------cccccceeeeeccCCCEEEEEccc
Q psy7108         177 ICIYSSREGILLKKFTITQNK-----------S---------L-D-----------GINDFINRRKMTEFGNVSLIETRE  224 (703)
Q Consensus       177 I~lwD~~~~~~~~~~~~~~~~-----------~---------~-~-----------~~~~~v~~~~~spdg~~l~~~~~~  224 (703)
                      ++++|.++|+.+.........           .         . +           +. ..-..++++|+...+++...+
T Consensus       331 l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg-~~w~~~a~dp~~~~~yv~~~~  409 (689)
T 1yiq_A          331 FYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGA-HDWQPMSYNPDTGLVYIPAHI  409 (689)
T ss_dssp             EEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCS-SCSSCCEEETTTTEEEEEEEE
T ss_pred             EEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccc-cCCCcceECCCCCEEEEeccc
Confidence            999999999987554322100           0         0 0           00 011237889988877765331


Q ss_pred             C--------------------CCC-------------------CeeEEECCCCCCCccceeecCCccceEEEEEcCCCCE
Q psy7108         225 T--------------------HEG-------------------GNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQA  265 (703)
Q Consensus       225 ~--------------------~~~-------------------~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~  265 (703)
                      .                    ..+                   -...+..||+.+++.+-+...+. .+..-.++..+..
T Consensus       410 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~g~~~taggl  488 (689)
T 1yiq_A          410 MSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT-IFNGGTLSTAGNL  488 (689)
T ss_dssp             CCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTE
T ss_pred             cceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCC-CccCccceECCCE
Confidence            0                    000                   02579999999998776655433 2333355667888


Q ss_pred             EEEEeCCC-EEEEEcCCCceeccee
Q psy7108         266 WVAATTEG-VHIYSLDSGYVFDPFL  289 (703)
Q Consensus       266 l~s~s~Dg-v~iwd~~~~~~~~~~~  289 (703)
                      +++++.|+ ++.||.++|+.+-.+.
T Consensus       489 vf~gt~dg~l~a~D~~tG~~lw~~~  513 (689)
T 1yiq_A          489 VFEGSADGRVIAYAADTGEKLWEQP  513 (689)
T ss_dssp             EEEECTTSEEEEEETTTCCEEEEEE
T ss_pred             EEEECCCCcEEEEECCCCccceeee
Confidence            99999999 9999999999876554

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=98.07  E-value=0.00067  Score=67.72  Aligned_cols=189  Identities=5%  Similarity=-0.097  Sum_probs=112.9

Q ss_pred             CEEEEEeCCCcEEEEEcCCCcee----EEEec-CCCcEEEEEEecCCCEEEEEE-CCCeEEEEEcCCCcEEEEEeccccC
Q psy7108          62 TGMVSASWDKTVKLWNAVETDTQ----HETIQ-LLSDALCVAYKPDGTEIVVAT-LDGQLIMFDVESAAQVGSVEARRDL  135 (703)
Q Consensus        62 ~~L~sgs~Dg~V~iWd~~~~~~~----~~~~~-~~~~V~~v~~spdg~~las~s-~dg~I~vwd~~~~~~~~~~~~~~~~  135 (703)
                      .+|+.+.. +.|+.+++......    ..... ....+.+++|++++..|+.+. .++.|..++++++.....+...   
T Consensus         2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~---   77 (267)
T 1npe_A            2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQD---   77 (267)
T ss_dssp             EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTT---
T ss_pred             cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECC---
Confidence            45555554 47888888654321    11111 234578999999877666655 4678999999766543332211   


Q ss_pred             CCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEE-ecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccC
Q psy7108         136 DSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAA-GQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEF  214 (703)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~-s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spd  214 (703)
                                       ......++++|++..|..+ ...+.|.++|+..... ..+... .      ......++++|+
T Consensus        78 -----------------~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-~~~~~~-~------~~~P~~i~vd~~  132 (267)
T 1npe_A           78 -----------------LGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR-RVLFDT-G------LVNPRGIVTDPV  132 (267)
T ss_dssp             -----------------CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECS-S------CSSEEEEEEETT
T ss_pred             -----------------CCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE-EEEEEC-C------CCCccEEEEeeC
Confidence                             1256889999976666655 4567899999875432 222111 1      124578899997


Q ss_pred             CCEEEEEcccCCCCCeeEEECCCCCCCccceeec-CCccceEEEEEcCCCCEEEEEeCC-C-EEEEEcCCCc
Q psy7108         215 GNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL-KPEVRVFCVKFSPTGQAWVAATTE-G-VHIYSLDSGY  283 (703)
Q Consensus       215 g~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~-~h~~~V~~l~~spdg~~l~s~s~D-g-v~iwd~~~~~  283 (703)
                      +..++++.... ..  ..|..++.... ....+. ..-.....++++|+++.|..+... + |.+++.++..
T Consensus       133 ~g~lyv~~~~~-~~--~~I~~~~~dg~-~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~  200 (267)
T 1npe_A          133 RGNLYWTDWNR-DN--PKIETSHMDGT-NRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPG  200 (267)
T ss_dssp             TTEEEEEECCS-SS--CEEEEEETTSC-CCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEE
T ss_pred             CCEEEEEECCC-CC--cEEEEEecCCC-CcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCc
Confidence            66666554321 01  25655554432 222221 223457899999998877666554 4 9999987543

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=98.02  E-value=0.0016  Score=64.39  Aligned_cols=216  Identities=12%  Similarity=0.112  Sum_probs=126.7

Q ss_pred             ccCCCcCeEEEEEcCCCCCCEEEE-EeCCCcEEEEEcCCCceeEEE-ecCCCcEEEEEEecCCCEEEEEECCCeEEEEEc
Q psy7108          43 LSGHEGPVSCIEFSPVLSSTGMVS-ASWDKTVKLWNAVETDTQHET-IQLLSDALCVAYKPDGTEIVVATLDGQLIMFDV  120 (703)
Q Consensus        43 l~gH~~~V~~l~~sp~~dg~~L~s-gs~Dg~V~iWd~~~~~~~~~~-~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~  120 (703)
                      +.|-.+.+..++|+|  +++.|++ ...++.|...|.. ++....+ .........+++.+++.++++.-.++.+.++++
T Consensus        22 l~g~~~~lSGla~~~--~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v   98 (255)
T 3qqz_A           22 IAGITNNISSLTWSA--QSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISL   98 (255)
T ss_dssp             CTTCCSCEEEEEEET--TTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred             CCCcccCcceeEEeC--CCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence            445556899999999  7665554 6667788888876 5433333 233367888999998876666556788999998


Q ss_pred             CCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECC---CCceEEEEEeccCC
Q psy7108         121 ESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSR---EGILLKKFTITQNK  197 (703)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~---~~~~~~~~~~~~~~  197 (703)
                      .....+.......- ..          ...........++|+|+++.|.++.......+|.+.   ....+....... .
T Consensus        99 ~~~~~i~~~~~~~~-~~----------~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~-~  166 (255)
T 3qqz_A           99 TPNSEVKILKKIKI-PL----------QESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKA-L  166 (255)
T ss_dssp             CTTCCEEEEEEEEC-CC----------SSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHH-H
T ss_pred             CCCCeeeeeeeecc-cc----------ccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchh-h
Confidence            76543222221110 00          001123457899999999887777665555555543   111122221100 0


Q ss_pred             ccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCC---------ccceEEEEEcCCCCEEEE
Q psy7108         198 SLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKP---------EVRVFCVKFSPTGQAWVA  268 (703)
Q Consensus       198 ~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h---------~~~V~~l~~spdg~~l~s  268 (703)
                      ........+..++++|....+++.+..+     +.+..+|.. |+.+..+.-.         -.....|+|.++|+ |..
T Consensus       167 ~~~~~~~d~S~l~~dp~tg~lliLS~~s-----~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyI  239 (255)
T 3qqz_A          167 QRQFTLDDVSGAEFNQQKNTLLVLSHES-----RALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYI  239 (255)
T ss_dssp             HHTCCSSCCCEEEEETTTTEEEEEETTT-----TEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEE
T ss_pred             ccccccCCceeEEEcCCCCeEEEEECCC-----CeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCC-EEE
Confidence            0000112467889999877666655433     467777765 4333332211         12578999999998 444


Q ss_pred             EeCCC-EEEEEcC
Q psy7108         269 ATTEG-VHIYSLD  280 (703)
Q Consensus       269 ~s~Dg-v~iwd~~  280 (703)
                      +++.. +++|...
T Consensus       240 vsE~n~~y~f~~~  252 (255)
T 3qqz_A          240 VSEPNRFYRFTPQ  252 (255)
T ss_dssp             EETTTEEEEEEC-
T ss_pred             EcCCceEEEEEec
Confidence            46666 6666543

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=97.99  E-value=0.0013  Score=68.69  Aligned_cols=219  Identities=7%  Similarity=-0.073  Sum_probs=126.2

Q ss_pred             ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEE-EEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEE
Q psy7108          28 VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMV-SASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEI  106 (703)
Q Consensus        28 v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~-sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~l  106 (703)
                      ++..+.++...  ..+........+++|++  .+..|+ +-...+.|..+++..................+++.+.+..|
T Consensus        55 I~~i~~~g~~~--~~~~~~~~~~~~l~~d~--~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~l  130 (349)
T 3v64_C           55 IRQVLPHRSEY--TLLLNNLENAIALDFHH--RRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKL  130 (349)
T ss_dssp             EEEECTTSCCE--EEEECSCSCEEEEEEET--TTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEE
T ss_pred             eEEEeCCCCee--EEeecCCCceEEEEEec--cccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeE
Confidence            44445555443  33333334578999998  555555 44566788889987654322222233456789999866665


Q ss_pred             EEE-ECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe-cC-CcEEEEECC
Q psy7108         107 VVA-TLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG-QS-KYICIYSSR  183 (703)
Q Consensus       107 as~-s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s-~d-g~I~lwD~~  183 (703)
                      +.+ ...+.|.+.+++.......+....                    .....++++|.+..|..+. .. +.|..+++.
T Consensus       131 y~~d~~~~~I~~~~~dG~~~~~l~~~~l--------------------~~P~~iavdp~~g~ly~td~~~~~~I~r~~~d  190 (349)
T 3v64_C          131 YWTDSGTSRIEVANLDGAHRKVLLWQSL--------------------EKPRAIALHPMEGTIYWTDWGNTPRIEASSMD  190 (349)
T ss_dssp             EEEETTTTEEEEEETTSCSCEEEECTTC--------------------SCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred             EEEcCCCCeEEEEcCCCCceEEEEeCCC--------------------CCcceEEEecCcCeEEEeccCCCCEEEEEeCC
Confidence            544 446789999987554332222211                    1468899999766665544 33 678888876


Q ss_pred             CCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCC
Q psy7108         184 EGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTG  263 (703)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg  263 (703)
                      .... ..+.. .      .....+.++++|++..++++....     ..|..+|..................++++. .+
T Consensus       191 G~~~-~~~~~-~------~~~~PnGla~d~~~~~lY~aD~~~-----~~I~~~~~dG~~~~~~~~~~~~~P~giav~-~~  256 (349)
T 3v64_C          191 GSGR-RIIAD-T------HLFWPNGLTIDYAGRRMYWVDAKH-----HVIERANLDGSHRKAVISQGLPHPFAITVF-ED  256 (349)
T ss_dssp             SCSC-EESCC-S------SCSCEEEEEEETTTTEEEEEETTT-----TEEEEEETTSCSCEEEECSSCSSEEEEEEE-TT
T ss_pred             CCCc-EEEEE-C------CCCCcceEEEeCCCCEEEEEECCC-----CEEEEEeCCCCceEEEEeCCCCCceEEEEE-CC
Confidence            4322 22110 0      112457899998877776654432     367777765433222222233456778773 33


Q ss_pred             CEEEEEeC-CC-EEEEEcCCCcee
Q psy7108         264 QAWVAATT-EG-VHIYSLDSGYVF  285 (703)
Q Consensus       264 ~~l~s~s~-Dg-v~iwd~~~~~~~  285 (703)
                       .+..+.. .+ |..++..+|+..
T Consensus       257 -~ly~td~~~~~V~~~~~~~G~~~  279 (349)
T 3v64_C          257 -SLYWTDWHTKSINSANKFTGKNQ  279 (349)
T ss_dssp             -EEEEEETTTTEEEEEETTTCCSC
T ss_pred             -EEEEecCCCCeEEEEEccCCCcc
Confidence             4544443 44 888886666543

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=97.92  E-value=0.0061  Score=62.51  Aligned_cols=203  Identities=7%  Similarity=-0.029  Sum_probs=118.8

Q ss_pred             CcCeEEEEEcCCCCCCEEE-EEeCCCcEEEEEcCCC---ceeEEEec-CCCcEEEEEEecCCCEEEEE-ECCCeEEEEEc
Q psy7108          47 EGPVSCIEFSPVLSSTGMV-SASWDKTVKLWNAVET---DTQHETIQ-LLSDALCVAYKPDGTEIVVA-TLDGQLIMFDV  120 (703)
Q Consensus        47 ~~~V~~l~~sp~~dg~~L~-sgs~Dg~V~iWd~~~~---~~~~~~~~-~~~~V~~v~~spdg~~las~-s~dg~I~vwd~  120 (703)
                      .....+++|++  .+..|+ +-..++.|..+++.+.   .....+.. .-.....+++++.+..|+.+ ..++.|.+.|+
T Consensus        29 ~~~p~g~~~d~--~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~  106 (316)
T 1ijq_A           29 LRNVVALDTEV--ASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT  106 (316)
T ss_dssp             CSSEEEEEEET--TTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred             CCceEEEEEEe--CCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeC
Confidence            45678999998  655555 4455688999998651   22222332 22456789998766656544 55788999998


Q ss_pred             CCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC--CcEEEEECCCCceEEEEEeccCCc
Q psy7108         121 ESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS--KYICIYSSREGILLKKFTITQNKS  198 (703)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d--g~I~lwD~~~~~~~~~~~~~~~~~  198 (703)
                      +.......+....                    .....++++|.+..|..+...  +.|...++... ....+....   
T Consensus       107 ~g~~~~~~~~~~~--------------------~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~-~~~~~~~~~---  162 (316)
T 1ijq_A          107 KGVKRKTLFRENG--------------------SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTEN---  162 (316)
T ss_dssp             TSSSEEEEEECTT--------------------CCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-CEEEEECSS---
T ss_pred             CCCceEEEEECCC--------------------CCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC-CeEEEEECC---
Confidence            7544333332211                    156889999977666655432  67888887643 333332111   


Q ss_pred             cccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceee-cC--CccceEEEEEcCCCCEEEEEeCCC-E
Q psy7108         199 LDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARV-LK--PEVRVFCVKFSPTGQAWVAATTEG-V  274 (703)
Q Consensus       199 ~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~-~~--h~~~V~~l~~spdg~~l~s~s~Dg-v  274 (703)
                          ....+.+++++++..++++....     ..|..+|..... ...+ ..  .-....++++. .+..+++-...+ |
T Consensus       163 ----~~~P~gla~d~~~~~lY~~D~~~-----~~I~~~d~dg~~-~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V  231 (316)
T 1ijq_A          163 ----IQWPNGITLDLLSGRLYWVDSKL-----HSISSIDVNGGN-RKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAI  231 (316)
T ss_dssp             ----CSCEEEEEEETTTTEEEEEETTT-----TEEEEEETTSCS-CEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEE
T ss_pred             ----CCCceEEEEeccCCEEEEEECCC-----CeEEEEecCCCc-eEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeE
Confidence                12567899999877776655432     367777776432 2222 11  12345677775 343334444444 8


Q ss_pred             EEEEcCCCceec
Q psy7108         275 HIYSLDSGYVFD  286 (703)
Q Consensus       275 ~iwd~~~~~~~~  286 (703)
                      ..++..+++...
T Consensus       232 ~~~~~~~g~~~~  243 (316)
T 1ijq_A          232 FSANRLTGSDVN  243 (316)
T ss_dssp             EEEETTTCCCCE
T ss_pred             EEEeCCCCcceE
Confidence            888877666443

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=97.90  E-value=0.0046  Score=65.80  Aligned_cols=220  Identities=8%  Similarity=-0.048  Sum_probs=128.3

Q ss_pred             ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEE-eCCCcEEEEEcCCCc---eeEEEec-CCCcEEEEEEecC
Q psy7108          28 VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSA-SWDKTVKLWNAVETD---TQHETIQ-LLSDALCVAYKPD  102 (703)
Q Consensus        28 v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sg-s~Dg~V~iWd~~~~~---~~~~~~~-~~~~V~~v~~spd  102 (703)
                      ++..+.++...  ..+......+.+++|++  .+..|+-+ ...+.|+.+++....   ....+.. .......+++.+.
T Consensus        94 I~~i~l~~~~~--~~~~~~~~~~~~l~~d~--~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~  169 (400)
T 3p5b_L           94 VRKMTLDRSEY--TSLIPNLRNVVALDTEV--ASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI  169 (400)
T ss_dssp             EEEECTTSCSC--EEEECSCSCEEEEEEET--TTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETT
T ss_pred             eEEEccCCcce--eEeccccCcceEEeeee--ccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEec
Confidence            44444444433  33444456788999998  55555544 456788888886521   1223333 4456788999986


Q ss_pred             CCEEEEE-ECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec--CCcEEE
Q psy7108         103 GTEIVVA-TLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ--SKYICI  179 (703)
Q Consensus       103 g~~las~-s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~--dg~I~l  179 (703)
                      +..|+.+ ...+.|.+.+++.......+....                    .....++++|.+..|..+..  .+.|..
T Consensus       170 ~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~--------------------~~P~~iavdp~~g~ly~td~~~~~~I~~  229 (400)
T 3p5b_L          170 HSNIYWTDSVLGTVSVADTKGVKRKTLFRENG--------------------SKPRAIVVDPVHGFMYWTDWGTPAKIKK  229 (400)
T ss_dssp             TTEEEEEETTTTEEEEECTTTCSEEEEEECSS--------------------CCEEEEEEETTTTEEEEEECSSSCCEEE
T ss_pred             CCceEEEECCCCeEEEEeCCCCceEEEEeCCC--------------------CCcceEEEecccCeEEEEeCCCCCEEEE
Confidence            5555554 456789999987665444433221                    14688999997666665542  367888


Q ss_pred             EECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC--CccceEEE
Q psy7108         180 YSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK--PEVRVFCV  257 (703)
Q Consensus       180 wD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~--h~~~V~~l  257 (703)
                      .++............        ....+.+++++++..++++....     ..|...|+...........  .-....++
T Consensus       230 ~~~dG~~~~~~~~~~--------l~~P~glavd~~~~~lY~aD~~~-----~~I~~~d~dG~~~~~~~~~~~~l~~P~gl  296 (400)
T 3p5b_L          230 GGLNGVDIYSLVTEN--------IQWPNGITLDLLSGRLYWVDSKL-----HSISSIDVNGGNRKTILEDEKRLAHPFSL  296 (400)
T ss_dssp             EETTSCSCEEEECSS--------CSCEEEEEEETTTTEEEEEETTT-----TEEEEEETTSCCCEEEEECSSTTSSEEEE
T ss_pred             EeCCCCccEEEEECC--------CCceEEEEEEeCCCEEEEEECCC-----CEEEEEeCCCCccEEEEeCCCCCCCCEEE
Confidence            888754332222111        12567899998887777664332     3677777654332222222  12335567


Q ss_pred             EEcCCCCEEEEEeCC-C-EEEEEcCCCceec
Q psy7108         258 KFSPTGQAWVAATTE-G-VHIYSLDSGYVFD  286 (703)
Q Consensus       258 ~~spdg~~l~s~s~D-g-v~iwd~~~~~~~~  286 (703)
                      ++  ++..++.+... + |..++..+|+...
T Consensus       297 ~v--~~~~lywtd~~~~~V~~~~~~~G~~~~  325 (400)
T 3p5b_L          297 AV--FEDKVFWTDIINEAIFSANRLTGSDVN  325 (400)
T ss_dssp             EE--ETTEEEEEESSSCSEEEEESSSCCCCE
T ss_pred             EE--eCCEEEEecCCCCeEEEEEcCCCCceE
Confidence            66  34455444443 4 8888877776543

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=97.85  E-value=0.00076  Score=71.00  Aligned_cols=195  Identities=11%  Similarity=0.074  Sum_probs=116.1

Q ss_pred             CCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcE-----EEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccC
Q psy7108          61 STGMVSASWDKTVKLWNAVETDTQHETIQLLSDA-----LCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDL  135 (703)
Q Consensus        61 g~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V-----~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~  135 (703)
                      +..++.++.++.+..+|..+++............     ......  +..+++++.++.+..+|..+++.+.........
T Consensus       143 ~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~  220 (376)
T 3q7m_A          143 DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQAT  220 (376)
T ss_dssp             TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC--
T ss_pred             CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCC
Confidence            3577888889999999998887655543322111     112222  456778888999999999999987666532110


Q ss_pred             CCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCC
Q psy7108         136 DSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFG  215 (703)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg  215 (703)
                        +...   ..........++    .  .+..+++++.++.+..+|.++++.+......          ....+..  ++
T Consensus       221 --~~~~---~~~~~~~~~~p~----~--~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~----------~~~~~~~--~~  277 (376)
T 3q7m_A          221 --GSTE---IDRLSDVDTTPV----V--VNGVVFALAYNGNLTALDLRSGQIMWKRELG----------SVNDFIV--DG  277 (376)
T ss_dssp             --------------CCCCCCE----E--ETTEEEEECTTSCEEEEETTTCCEEEEECCC----------CEEEEEE--ET
T ss_pred             --CCcc---cccccccCCCcE----E--ECCEEEEEecCcEEEEEECCCCcEEeeccCC----------CCCCceE--EC
Confidence              0000   000000000111    1  2466777888899999999999877654321          1122222  34


Q ss_pred             CEEEEEcccCCCCCeeEEECCCCCCCccceeecCC-ccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecce
Q psy7108         216 NVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKP-EVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPF  288 (703)
Q Consensus       216 ~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h-~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~  288 (703)
                      ..+++++.++      .+..+|..+++........ ...+.....  .+..++.++.+| +.++|..+++.....
T Consensus       278 ~~l~~~~~~g------~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~  344 (376)
T 3q7m_A          278 NRIYLVDQND------RVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFVAQQ  344 (376)
T ss_dssp             TEEEEEETTC------CEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred             CEEEEEcCCC------eEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence            5555555432      5888899888876555421 222222232  256788888898 999999998875443

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=97.84  E-value=0.0011  Score=69.58  Aligned_cols=191  Identities=12%  Similarity=0.095  Sum_probs=115.4

Q ss_pred             CCCEEEEEeCCCcEEEEEcCCCceeEEEecC---------CCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEe
Q psy7108          60 SSTGMVSASWDKTVKLWNAVETDTQHETIQL---------LSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVE  130 (703)
Q Consensus        60 dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~---------~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~  130 (703)
                      .+..++.++.++.|..+|..+++........         ...+.+. ...++..+++++.++.|..+|.++|+.+-...
T Consensus        52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~  130 (376)
T 3q7m_A           52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTK  130 (376)
T ss_dssp             ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred             ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEe
Confidence            3567888888899999999888765544332         2233222 22245678888899999999999999876665


Q ss_pred             ccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCc-cccccccceee
Q psy7108         131 ARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKS-LDGINDFINRR  209 (703)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~-~~~~~~~v~~~  209 (703)
                      ......                ..++    ..  +..+++++.++.|..+|.++++.+..+....... ..+    ....
T Consensus       131 ~~~~~~----------------~~p~----~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~----~~~~  184 (376)
T 3q7m_A          131 VAGEAL----------------SRPV----VS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRG----ESAP  184 (376)
T ss_dssp             CSSCCC----------------SCCE----EE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CC----CCCC
T ss_pred             CCCceE----------------cCCE----EE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecC----CCCc
Confidence            432210                0011    11  4577888889999999999999887765432210 000    0112


Q ss_pred             eeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCcc-------ceEEEEEcC--CCCEEEEEeCCC-EEEEEc
Q psy7108         210 KMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEV-------RVFCVKFSP--TGQAWVAATTEG-VHIYSL  279 (703)
Q Consensus       210 ~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~-------~V~~l~~sp--dg~~l~s~s~Dg-v~iwd~  279 (703)
                      ...  +..++++..++      .+..+|..+++..........       .+..+.-+|  .+..++.++.++ +..+|.
T Consensus       185 ~~~--~~~v~~g~~~g------~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~  256 (376)
T 3q7m_A          185 TTA--FGAAVVGGDNG------RVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDL  256 (376)
T ss_dssp             EEE--TTEEEECCTTT------EEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEET
T ss_pred             EEE--CCEEEEEcCCC------EEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEEC
Confidence            222  33455554432      688888888876654432210       000011111  245677777777 999999


Q ss_pred             CCCcee
Q psy7108         280 DSGYVF  285 (703)
Q Consensus       280 ~~~~~~  285 (703)
                      .+++..
T Consensus       257 ~tG~~~  262 (376)
T 3q7m_A          257 RSGQIM  262 (376)
T ss_dssp             TTCCEE
T ss_pred             CCCcEE
Confidence            888764

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=97.67  E-value=0.017  Score=67.45  Aligned_cols=202  Identities=14%  Similarity=0.157  Sum_probs=129.4

Q ss_pred             CcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEe-c--------CCCcEEEEEEecCCCEEEEEECCCeEEE
Q psy7108          47 EGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETI-Q--------LLSDALCVAYKPDGTEIVVATLDGQLIM  117 (703)
Q Consensus        47 ~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~-~--------~~~~V~~v~~spdg~~las~s~dg~I~v  117 (703)
                      ...|.++...+  +|.+. .|+.++-|..|+..++.. .... .        ....|.+++..++|+.|.+|+.++-|..
T Consensus       356 ~~~V~~i~~d~--~g~lW-iGt~~~Gl~~~~~~~~~~-~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~  431 (795)
T 4a2l_A          356 DNVVSCIVEDK--DKNLW-IGTNDGGLNLYNPITQRF-TSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSI  431 (795)
T ss_dssp             CSSEEEEEECT--TSCEE-EEESSSCEEEECTTTCCE-EEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEE
T ss_pred             CCeeEEEEECC--CCCEE-EEECCCCeEEEcCCCCcE-EEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeE
Confidence            45699999988  77654 466776788899776532 2221 1        2356899999988885677778788999


Q ss_pred             EEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCC
Q psy7108         118 FDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNK  197 (703)
Q Consensus       118 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~  197 (703)
                      +|.++++... +.....               ......|.++...++|+..+.. . +-+.+||..+++... +..... 
T Consensus       432 ~d~~~~~~~~-~~~~~~---------------~l~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~~~~-~~~~~~-  491 (795)
T 4a2l_A          432 LHRNSGQVEN-FNQRNS---------------QLVNENVYAILPDGEGNLWLGT-L-SALVRFNPEQRSFTT-IEKEKD-  491 (795)
T ss_dssp             EETTTCCEEE-ECTTTS---------------CCSCSCEEEEEECSSSCEEEEE-S-SCEEEEETTTTEEEE-CCBCTT-
T ss_pred             EeCCCCcEEE-eecCCC---------------CcCCCeeEEEEECCCCCEEEEe-c-CceeEEeCCCCeEEE-cccccc-
Confidence            9998876433 221100               0123479999999988865544 4 458899988765432 211100 


Q ss_pred             ccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeec-------CCccceEEEEEcCCCCEEEEEe
Q psy7108         198 SLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL-------KPEVRVFCVKFSPTGQAWVAAT  270 (703)
Q Consensus       198 ~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~-------~h~~~V~~l~~spdg~~l~s~s  270 (703)
                      ...-....|.++...++|...+.+. .|       +..||..+++.  .+.       .+...|.++..+++|+..++..
T Consensus       492 ~~~~~~~~i~~i~~d~~g~lWigt~-~G-------l~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~  561 (795)
T 4a2l_A          492 GTPVVSKQITTLFRDSHKRLWIGGE-EG-------LSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIWVGTR  561 (795)
T ss_dssp             CCBCCCCCEEEEEECTTCCEEEEES-SC-------EEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEES
T ss_pred             ccccCCceEEEEEECCCCCEEEEeC-Cc-------eEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC
Confidence            0001124678888888888666544 33       66777665543  111       1245689999999998666544


Q ss_pred             CCCEEEEEcCCCc
Q psy7108         271 TEGVHIYSLDSGY  283 (703)
Q Consensus       271 ~Dgv~iwd~~~~~  283 (703)
                       .|+..|+..+++
T Consensus       562 -~Gl~~~d~~~~~  573 (795)
T 4a2l_A          562 -EGFYCFNEKDKQ  573 (795)
T ss_dssp             -SCEEEEETTTTE
T ss_pred             -CCceeECCCCCc
Confidence             489999987654

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=97.67  E-value=0.005  Score=63.18  Aligned_cols=198  Identities=13%  Similarity=0.054  Sum_probs=114.4

Q ss_pred             CeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEec-----CCCcEEEEEEec-CCCEEEEEEC-----------
Q psy7108          49 PVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQ-----LLSDALCVAYKP-DGTEIVVATL-----------  111 (703)
Q Consensus        49 ~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~-----~~~~V~~v~~sp-dg~~las~s~-----------  111 (703)
                      ...++++.+  ++..|+.+...+.+..+|..++. ...+..     .......+++.+ +|+..++-..           
T Consensus        81 ~p~gi~~~~--~~g~l~v~d~~~~i~~~d~~~g~-~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~  157 (322)
T 2fp8_A           81 RTYDISYNL--QNNQLYIVDCYYHLSVVGSEGGH-ATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQI  157 (322)
T ss_dssp             CEEEEEEET--TTTEEEEEETTTEEEEECTTCEE-CEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHH
T ss_pred             CCceEEEcC--CCCcEEEEECCCCEEEEeCCCCE-EEEecccCCCCcccccceEEEecCCCEEEEECCccccccccccee
Confidence            578899997  44556666555558888865442 222221     113478899999 9986665432           


Q ss_pred             ------CCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEE-ecCCcEEEEECCC
Q psy7108         112 ------DGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAA-GQSKYICIYSSRE  184 (703)
Q Consensus       112 ------dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~-s~dg~I~lwD~~~  184 (703)
                            ++.|..+|..+++.......-.                     ....++++|+|+.|.++ +..+.|..||+..
T Consensus       158 ~~~~~~~g~v~~~d~~~~~~~~~~~~~~---------------------~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~  216 (322)
T 2fp8_A          158 MDTSDKTGRLIKYDPSTKETTLLLKELH---------------------VPGGAEVSADSSFVLVAEFLSHQIVKYWLEG  216 (322)
T ss_dssp             HHHTCCCEEEEEEETTTTEEEEEEEEES---------------------CCCEEEECTTSSEEEEEEGGGTEEEEEESSS
T ss_pred             hcccCCCceEEEEeCCCCEEEEeccCCc---------------------cCcceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence                  3678889987776433322211                     24569999999876665 5567899999875


Q ss_pred             Cc--eEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCC----CCeeEEECCCCCCCccceeecCCc----cce
Q psy7108         185 GI--LLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHE----GGNVVLKLPGVKKGDMAARVLKPE----VRV  254 (703)
Q Consensus       185 ~~--~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~----~~~~~i~iwd~~~~~~~~~~~~h~----~~V  254 (703)
                      ..  ....+..     ..+    ...+++.++|+..++.......    .....|..+|.. ++....+....    ..+
T Consensus       217 ~~~~~~~~~~~-----~~g----P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~  286 (322)
T 2fp8_A          217 PKKGTAEVLVK-----IPN----PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHF  286 (322)
T ss_dssp             TTTTCEEEEEE-----CSS----EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCC
T ss_pred             CcCCccceEEe-----CCC----CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccc
Confidence            32  1222221     111    4568999999865554331000    001357777764 55555444332    346


Q ss_pred             EEEEEcCCCCEEEEEeCCC-EEEEEcCC
Q psy7108         255 FCVKFSPTGQAWVAATTEG-VHIYSLDS  281 (703)
Q Consensus       255 ~~l~~spdg~~l~s~s~Dg-v~iwd~~~  281 (703)
                      .++++ .+++.+++...++ |.+++++.
T Consensus       287 ~~~~~-~~g~L~v~~~~~~~i~~~~~~~  313 (322)
T 2fp8_A          287 EQIQE-HDGLLYIGTLFHGSVGILVYDK  313 (322)
T ss_dssp             CEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred             eEEEE-eCCEEEEeecCCCceEEEeccc
Confidence            66666 3554444444455 88888753

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=97.64  E-value=0.017  Score=67.41  Aligned_cols=207  Identities=10%  Similarity=0.120  Sum_probs=130.8

Q ss_pred             CcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEec-------CCCcEEEEEEecCCCEEEEEECCCeEEEEE
Q psy7108          47 EGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQ-------LLSDALCVAYKPDGTEIVVATLDGQLIMFD  119 (703)
Q Consensus        47 ~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~-------~~~~V~~v~~spdg~~las~s~dg~I~vwd  119 (703)
                      ...|.++...+  +|.+- .|+.++-|..++..+.. ......       ....|.++...++|.. -.|+.++-|..||
T Consensus       309 ~~~i~~i~~D~--~g~lW-igt~~~Gl~~~~~~~~~-~~~~~~~~~~~~l~~~~V~~i~~d~~g~l-WiGt~~~Gl~~~~  383 (795)
T 4a2l_A          309 QRSVRSIFMDS--QGGMW-LGTYFGGLNYYHPIRNR-FKNIRNIPYKNSLSDNVVSCIVEDKDKNL-WIGTNDGGLNLYN  383 (795)
T ss_dssp             SSCEEEEEECT--TSCEE-EEESSSCEEEECGGGGS-SEEECCCTTSSSCSCSSEEEEEECTTSCE-EEEESSSCEEEEC
T ss_pred             CCcEEEEEEeC--CcCEE-EEECCCCeEEeCCCccc-ceEEcCCCCCCCCCCCeeEEEEECCCCCE-EEEECCCCeEEEc
Confidence            36799999998  77644 56666778888865442 111111       2346999999888874 4567777899999


Q ss_pred             cCCCcEEEEEeccccCCCCCCCCccchhhc-ccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCc
Q psy7108         120 VESAAQVGSVEARRDLDSGRLDTDLVTREQ-SLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKS  198 (703)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~  198 (703)
                      ..+++..........             .. ......|.+++..++|+.|..|+.++-|..||..+++.. .+..... .
T Consensus       384 ~~~~~~~~~~~~~~~-------------~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~-~~~~~~~-~  448 (795)
T 4a2l_A          384 PITQRFTSYTLQEDE-------------SARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVE-NFNQRNS-Q  448 (795)
T ss_dssp             TTTCCEEEECCC-------------------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEE-EECTTTS-C
T ss_pred             CCCCcEEEEecCCCC-------------cccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEE-EeecCCC-C
Confidence            887654332211100             00 011247999999999985666777677999999887643 3321111 0


Q ss_pred             cccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeec------CCccceEEEEEcCCCCEEEEEeCC
Q psy7108         199 LDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL------KPEVRVFCVKFSPTGQAWVAATTE  272 (703)
Q Consensus       199 ~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~------~h~~~V~~l~~spdg~~l~s~s~D  272 (703)
                        .....|.++...++|...+.+. .|       +.+||..+++......      -....|.++...++|+..+... +
T Consensus       449 --l~~~~v~~i~~d~~g~lwigt~-~G-------l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~  517 (795)
T 4a2l_A          449 --LVNENVYAILPDGEGNLWLGTL-SA-------LVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-E  517 (795)
T ss_dssp             --CSCSCEEEEEECSSSCEEEEES-SC-------EEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-S
T ss_pred             --cCCCeeEEEEECCCCCEEEEec-Cc-------eeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-C
Confidence              1224678888888888655543 33       7777776654332211      1235689999999998766555 7


Q ss_pred             CEEEEEcCCCce
Q psy7108         273 GVHIYSLDSGYV  284 (703)
Q Consensus       273 gv~iwd~~~~~~  284 (703)
                      |+..|+..++..
T Consensus       518 Gl~~~~~~~~~~  529 (795)
T 4a2l_A          518 GLSVFKQEGLDI  529 (795)
T ss_dssp             CEEEEEEETTEE
T ss_pred             ceEEEeCCCCeE
Confidence            799999876653

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=97.60  E-value=0.011  Score=60.74  Aligned_cols=201  Identities=7%  Similarity=-0.034  Sum_probs=118.4

Q ss_pred             cCeEEEEEcCCCCCCEE-EEEeCCCcEEEEEcCCCceeEE-EecCCCcEEEEEEecCCCEEEEE-ECCCeEEEEEcCCCc
Q psy7108          48 GPVSCIEFSPVLSSTGM-VSASWDKTVKLWNAVETDTQHE-TIQLLSDALCVAYKPDGTEIVVA-TLDGQLIMFDVESAA  124 (703)
Q Consensus        48 ~~V~~l~~sp~~dg~~L-~sgs~Dg~V~iWd~~~~~~~~~-~~~~~~~V~~v~~spdg~~las~-s~dg~I~vwd~~~~~  124 (703)
                      ....+++|++  .+..| .+-...+.|..++......... ....-.....+++.+.+..|+.+ ...+.|.+++++...
T Consensus        35 ~~~~~ld~d~--~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~  112 (318)
T 3sov_A           35 EDAAAVDFVF--SHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL  112 (318)
T ss_dssp             EEEEEEEEEG--GGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred             CccEEEEEEe--CCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCc
Confidence            4567899998  54544 4545667888899876532222 22233456788998766555544 456789999987543


Q ss_pred             EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe--cCCcEEEEECCCCceEEEEEeccCCccccc
Q psy7108         125 QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG--QSKYICIYSSREGILLKKFTITQNKSLDGI  202 (703)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s--~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~  202 (703)
                      ....+...                    ......+++.|.+..|..+.  ..+.|...++..... ..+... .      
T Consensus       113 ~~~l~~~~--------------------~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~-~~~~~~-~------  164 (318)
T 3sov_A          113 RKVLFWQE--------------------LDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR-FIIINS-E------  164 (318)
T ss_dssp             CEEEECSS--------------------CSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC-EEEECS-S------
T ss_pred             EEEEEeCC--------------------CCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe-EEEEEC-C------
Confidence            32222211                    12567899999766666654  256788888764332 222111 1      


Q ss_pred             cccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEe-CCC-EEEEEcC
Q psy7108         203 NDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAAT-TEG-VHIYSLD  280 (703)
Q Consensus       203 ~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s-~Dg-v~iwd~~  280 (703)
                      ....+.+++++++..++++....     ..|..+|..................++++..  ..++.+. ..+ |..++..
T Consensus       165 l~~Pnglavd~~~~~lY~aD~~~-----~~I~~~d~dG~~~~~~~~~~~~~P~glav~~--~~lywtd~~~~~V~~~~~~  237 (318)
T 3sov_A          165 IYWPNGLTLDYEEQKLYWADAKL-----NFIHKSNLDGTNRQAVVKGSLPHPFALTLFE--DILYWTDWSTHSILACNKY  237 (318)
T ss_dssp             CSCEEEEEEETTTTEEEEEETTT-----TEEEEEETTSCSCEEEECSCCSCEEEEEEET--TEEEEEETTTTEEEEEETT
T ss_pred             CCCccEEEEeccCCEEEEEECCC-----CEEEEEcCCCCceEEEecCCCCCceEEEEeC--CEEEEEecCCCeEEEEECC
Confidence            12457899999777766654332     3677777654322222222334566777753  3444334 344 8888987


Q ss_pred             CCcee
Q psy7108         281 SGYVF  285 (703)
Q Consensus       281 ~~~~~  285 (703)
                      +|+..
T Consensus       238 ~G~~~  242 (318)
T 3sov_A          238 TGEGL  242 (318)
T ss_dssp             TCCSC
T ss_pred             CCCce
Confidence            77653

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=97.57  E-value=0.019  Score=58.32  Aligned_cols=211  Identities=11%  Similarity=0.007  Sum_probs=115.9

Q ss_pred             ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCC--cEEEEEcCCCceeEEEec--CCCcEEEEEEecCC
Q psy7108          28 VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDK--TVKLWNAVETDTQHETIQ--LLSDALCVAYKPDG  103 (703)
Q Consensus        28 v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg--~V~iWd~~~~~~~~~~~~--~~~~V~~v~~spdg  103 (703)
                      +..+|.+++..  ..+. -.....++++++  +|+++++.....  .|..++..+++. ..+..  .......++..+++
T Consensus        55 I~~~d~~g~~~--~~~~-~~~~p~gia~~~--dG~l~vad~~~~~~~v~~~d~~~g~~-~~~~~~~~~~~~~g~~~~~~~  128 (306)
T 2p4o_A           55 IVSITPDGNQQ--IHAT-VEGKVSGLAFTS--NGDLVATGWNADSIPVVSLVKSDGTV-ETLLTLPDAIFLNGITPLSDT  128 (306)
T ss_dssp             EEEECTTCCEE--EEEE-CSSEEEEEEECT--TSCEEEEEECTTSCEEEEEECTTSCE-EEEEECTTCSCEEEEEESSSS
T ss_pred             EEEECCCCceE--EEEe-CCCCceeEEEcC--CCcEEEEeccCCcceEEEEcCCCCeE-EEEEeCCCccccCcccccCCC
Confidence            44456666654  3333 234688999999  898766654332  355566666643 32222  22233455555555


Q ss_pred             CEEEEEECCCeEEEEEcCCCcE-EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe-cCCcEEEEE
Q psy7108         104 TEIVVATLDGQLIMFDVESAAQ-VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG-QSKYICIYS  181 (703)
Q Consensus       104 ~~las~s~dg~I~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s-~dg~I~lwD  181 (703)
                      ..+++-..++.|+++|..+++. +......  .....         ..........+  +||++.|.++. ..+.|..+|
T Consensus       129 ~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~--~~~~~---------~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~  195 (306)
T 2p4o_A          129 QYLTADSYRGAIWLIDVVQPSGSIWLEHPM--LARSN---------SESVFPAANGL--KRFGNFLYVSNTEKMLLLRIP  195 (306)
T ss_dssp             EEEEEETTTTEEEEEETTTTEEEEEEECGG--GSCSS---------TTCCSCSEEEE--EEETTEEEEEETTTTEEEEEE
T ss_pred             cEEEEECCCCeEEEEeCCCCcEeEEEECCc--ccccc---------ccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEE
Confidence            4444444588999999876532 2111111  00000         00001133445  78888776654 567899999


Q ss_pred             CCC-Cce--EEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccce--eecCCccceEE
Q psy7108         182 SRE-GIL--LKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAA--RVLKPEVRVFC  256 (703)
Q Consensus       182 ~~~-~~~--~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~--~~~~h~~~V~~  256 (703)
                      +.. ++.  ...+.. .        .....++++++|+.+++....      ..|.++|.. ++...  .....-...++
T Consensus       196 ~~~~g~~~~~~~~~~-~--------~~P~gi~vd~dG~l~va~~~~------~~V~~~~~~-G~~~~~~~~~~~~~~p~~  259 (306)
T 2p4o_A          196 VDSTDKPGEPEIFVE-Q--------TNIDDFAFDVEGNLYGATHIY------NSVVRIAPD-RSTTIIAQAEQGVIGSTA  259 (306)
T ss_dssp             BCTTSCBCCCEEEEE-S--------CCCSSEEEBTTCCEEEECBTT------CCEEEECTT-CCEEEEECGGGTCTTEEE
T ss_pred             eCCCCCCCccEEEec-c--------CCCCCeEECCCCCEEEEeCCC------CeEEEECCC-CCEEEEeecccccCCceE
Confidence            875 321  111110 0        134568999999865554332      257888865 54422  22223356889


Q ss_pred             EEEc---CCCCEEEEEeCCC
Q psy7108         257 VKFS---PTGQAWVAATTEG  273 (703)
Q Consensus       257 l~~s---pdg~~l~s~s~Dg  273 (703)
                      ++|.   |+++.|+.++..+
T Consensus       260 ~a~~g~~~d~~~LyVt~~~~  279 (306)
T 2p4o_A          260 VAFGQTEGDCTAIYVVTNGG  279 (306)
T ss_dssp             EEECCSTTTTTEEEEEECTT
T ss_pred             EEEecccCCCCEEEEECCCC
Confidence            9998   8988876665544

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=97.57  E-value=0.011  Score=63.61  Aligned_cols=134  Identities=9%  Similarity=0.048  Sum_probs=79.5

Q ss_pred             ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeC-CC----cEEEEEcCCCceeEEEecCCCcEEEEEEec-
Q psy7108          28 VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASW-DK----TVKLWNAVETDTQHETIQLLSDALCVAYKP-  101 (703)
Q Consensus        28 v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~-Dg----~V~iWd~~~~~~~~~~~~~~~~V~~v~~sp-  101 (703)
                      +...|..+..+  ..+.........++|++  +++.|+.+.. ++    .+...+....-..............++++| 
T Consensus       161 I~~id~~~~~v--~~~~~~~~~P~~ia~d~--~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~~~~~p~giavdp~  236 (430)
T 3tc9_A          161 TRLIDFEKEYV--STVYSGLSKVRTICWTH--EADSMIITNDQNNNDRPNNYILTRESGFKVITELTKGQNCNGAETHPI  236 (430)
T ss_dssp             EEEEETTTTEE--EEEECCCSCEEEEEECT--TSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEEEECSSCCCEEECTT
T ss_pred             EEEEECCCCEE--EEEecCCCCcceEEEeC--CCCEEEEEeCCCCcccceEEEEeCCCceeeeeeeccCCCceEEEEeCC
Confidence            44456555544  44444556688999999  9996655543 22    233334322211112222234457788999 


Q ss_pred             CCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEE-ecCCcEEEE
Q psy7108         102 DGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAA-GQSKYICIY  180 (703)
Q Consensus       102 dg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~-s~dg~I~lw  180 (703)
                      +|..+++-..++.|..++.+++..........                   ......++|+|+|++|..+ ...+.|..+
T Consensus       237 ~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~-------------------~~~P~gia~~pdG~~lyv~d~~~~~I~~~  297 (430)
T 3tc9_A          237 NGELYFNSWNAGQVFRYDFTTQETTPLFTIQD-------------------SGWEFHIQFHPSGNYAYIVVVNQHYILRS  297 (430)
T ss_dssp             TCCEEEEETTTTEEEEEETTTTEEEEEEECSS-------------------SSCCEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred             CCEEEEEECCCCEEEEEECCCCcEEEEEEcCC-------------------CCcceeEEEcCCCCEEEEEECCCCEEEEE
Confidence            66666665567899999998765432222111                   1135689999999965554 456789998


Q ss_pred             ECCC
Q psy7108         181 SSRE  184 (703)
Q Consensus       181 D~~~  184 (703)
                      +...
T Consensus       298 ~~d~  301 (430)
T 3tc9_A          298 DYDW  301 (430)
T ss_dssp             EEET
T ss_pred             eCCc
Confidence            7653

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=97.57  E-value=0.00083  Score=77.96  Aligned_cols=156  Identities=10%  Similarity=0.072  Sum_probs=97.3

Q ss_pred             cEEEEEEe-cCCCEEEEEEC-CC----eEEEEEcCCC-cEEE-EEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC
Q psy7108          93 DALCVAYK-PDGTEIVVATL-DG----QLIMFDVESA-AQVG-SVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD  164 (703)
Q Consensus        93 ~V~~v~~s-pdg~~las~s~-dg----~I~vwd~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd  164 (703)
                      .+...+|| |||++||.+.. +|    +|+++|+.++ +.+. .+..                       ....++|+||
T Consensus       175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~-----------------------~~~~~~WspD  231 (751)
T 2xe4_A          175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSG-----------------------TNGEIVWGPD  231 (751)
T ss_dssp             EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEE-----------------------ECSCCEECSS
T ss_pred             EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccC-----------------------ceeeEEEecC
Confidence            57789999 99999886654 22    4999999988 5321 0110                       1235789999


Q ss_pred             CCEEEEEecC-----CcEEEEECCCCce--EEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCC
Q psy7108         165 GSCILAAGQS-----KYICIYSSREGIL--LKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPG  237 (703)
Q Consensus       165 g~~l~s~s~d-----g~I~lwD~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd  237 (703)
                      |+.|+....|     ..|+.+++.++..  ...+....       .....++.|||||+++++.....   ....+.++|
T Consensus       232 g~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~-------~~~~~~~~~SpDg~~l~~~~~~~---~~~~l~~~d  301 (751)
T 2xe4_A          232 HTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHN-------PLFSAFMYKAADTNTLCIGSQSP---ETAEVHLLD  301 (751)
T ss_dssp             TTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCC-------TTCEEEEEECTTSSEEEEEEECS---SCEEEEEEE
T ss_pred             CCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCC-------CceEEEEEECCCCCEEEEEecCC---CCceEEEEE
Confidence            9988877655     3588888887642  23332211       12446789999999988877543   235788889


Q ss_pred             CCCCc--c--ceeecCCccceEEEEEcCCCCEEEEEeCC--C---EEEEEcCC
Q psy7108         238 VKKGD--M--AARVLKPEVRVFCVKFSPTGQAWVAATTE--G---VHIYSLDS  281 (703)
Q Consensus       238 ~~~~~--~--~~~~~~h~~~V~~l~~spdg~~l~s~s~D--g---v~iwd~~~  281 (703)
                      +.++.  .  ............++.|+.++.+++....+  +   |..+++.+
T Consensus       302 ~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~  354 (751)
T 2xe4_A          302 LRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQ  354 (751)
T ss_dssp             SSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTS
T ss_pred             CCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCC
Confidence            88752  2  22223344455666655444444555444  2   66667654

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=97.53  E-value=0.033  Score=64.40  Aligned_cols=207  Identities=7%  Similarity=-0.055  Sum_probs=121.3

Q ss_pred             cccCCCcCeEEEEEcCCCCCCEEE-EEeCCCcEEEEEcCCCc---eeEEEec-CCCcEEEEEEecCCCEEEEEE-CCCeE
Q psy7108          42 VLSGHEGPVSCIEFSPVLSSTGMV-SASWDKTVKLWNAVETD---TQHETIQ-LLSDALCVAYKPDGTEIVVAT-LDGQL  115 (703)
Q Consensus        42 ~l~gH~~~V~~l~~sp~~dg~~L~-sgs~Dg~V~iWd~~~~~---~~~~~~~-~~~~V~~v~~spdg~~las~s-~dg~I  115 (703)
                      .+......+.+++|++  ....|+ +-...+.|+.+++....   ....+.. .......+++.+.+..|+.+. ..+.|
T Consensus       418 ~l~~~~~~~~gl~~d~--~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I  495 (791)
T 3m0c_C          418 SLIPNLRNVVALDTEV--ASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTV  495 (791)
T ss_dssp             EEECSCSSEEEEEEET--TTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEE
T ss_pred             eeecCCCceEEEeecc--cCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeE
Confidence            3334456678999998  555554 54556788888886531   1222333 345667899998887666554 46789


Q ss_pred             EEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec--CCcEEEEECCCCceEEEEEe
Q psy7108         116 IMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ--SKYICIYSSREGILLKKFTI  193 (703)
Q Consensus       116 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~--dg~I~lwD~~~~~~~~~~~~  193 (703)
                      .+.+++.......+....                    .....|+++|.+..|+.+..  .+.|...++..... ..+..
T Consensus       496 ~v~~ldG~~~~~l~~~~l--------------------~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~-~~lv~  554 (791)
T 3m0c_C          496 SVADTKGVKRKTLFRENG--------------------SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSLVT  554 (791)
T ss_dssp             EEEETTSSSEEEEEECTT--------------------CCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE-EEEEC
T ss_pred             EEEeCCCCeEEEEEeCCC--------------------CCcceEEEecCCCCEEEecCCCCCeEEEEecCCCce-EEEEe
Confidence            999987554433333221                    15789999998666666543  26799999875433 33321


Q ss_pred             ccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCC--ccceEEEEEcCCCCEEEEEeC
Q psy7108         194 TQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKP--EVRVFCVKFSPTGQAWVAATT  271 (703)
Q Consensus       194 ~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h--~~~V~~l~~spdg~~l~s~s~  271 (703)
                      ..       ....+.+++++.+..++++....     ..|...++............  -....+|++.  +..|+.+..
T Consensus       555 ~~-------l~~P~GLavD~~~~~LYwaD~~~-----~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~--~~~lYwtD~  620 (791)
T 3m0c_C          555 EN-------IQWPNGITLDLLSGRLYWVDSKL-----HSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDI  620 (791)
T ss_dssp             SS-------CSCEEEEEEETTTTEEEEEETTT-----TEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEET
T ss_pred             CC-------CCCceEEEEecCCCeEEEEeCCC-----CcEEEEecCCCceEEEecCCCccCCCCEEEEe--CCEEEEEEC
Confidence            11       12567899998777776654321     36777776544332222221  1234466653  446665554


Q ss_pred             CC--EEEEEcCCCcee
Q psy7108         272 EG--VHIYSLDSGYVF  285 (703)
Q Consensus       272 Dg--v~iwd~~~~~~~  285 (703)
                      ..  |...+..+|+..
T Consensus       621 ~~~~I~~~dk~tG~~~  636 (791)
T 3m0c_C          621 INEAIFSANRLTGSDV  636 (791)
T ss_dssp             TTTEEEEEETTTCCCC
T ss_pred             CCCEEEEEeCCCCcce
Confidence            44  777776666543

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=97.51  E-value=0.013  Score=62.89  Aligned_cols=195  Identities=12%  Similarity=0.078  Sum_probs=110.8

Q ss_pred             CeEEEEEcCCCC--CCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCC-----eEEEEEcC
Q psy7108          49 PVSCIEFSPVLS--STGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDG-----QLIMFDVE  121 (703)
Q Consensus        49 ~V~~l~~sp~~d--g~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg-----~I~vwd~~  121 (703)
                      .-.+++|+|  +  +..|+.+...+.|+.+|..++ .+..+........+++++++|+ |+++...+     .+...+..
T Consensus       140 ~P~gvavd~--~s~~g~Lyv~D~~~~I~~id~~~g-~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~  215 (433)
T 4hw6_A          140 NIWRMMFDP--NSNYDDLYWVGQRDAFRHVDFVNQ-YVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRA  215 (433)
T ss_dssp             CCCEEEECT--TTTTCEEEEECBTSCEEEEETTTT-EEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGG
T ss_pred             CCceEEEcc--ccCCCEEEEEeCCCCEEEEECCCC-EEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECC
Confidence            356899998  5  344555544488999998766 4455555556689999999999 55554322     12223222


Q ss_pred             CCcE-EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC-CCCEEEEEecCCcEEEEECCCCceEEEEEeccCCcc
Q psy7108         122 SAAQ-VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA-DGSCILAAGQSKYICIYSSREGILLKKFTITQNKSL  199 (703)
Q Consensus       122 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp-dg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~  199 (703)
                      .+.. ...+..                     ......++++| +|...++-..++.|+.+|..++.....+.....   
T Consensus       216 ~~~~~~~~~~~---------------------~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~---  271 (433)
T 4hw6_A          216 SGFTERLSLCN---------------------ARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDT---  271 (433)
T ss_dssp             GTTCCEEEEEE---------------------CSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSC---
T ss_pred             CCeeccccccc---------------------cCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCC---
Confidence            1110 001110                     11345688999 666655555678899999987766333321111   


Q ss_pred             ccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC--CCccc--eeecCC---------------ccceEEEEE-
Q psy7108         200 DGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK--KGDMA--ARVLKP---------------EVRVFCVKF-  259 (703)
Q Consensus       200 ~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~--~~~~~--~~~~~h---------------~~~V~~l~~-  259 (703)
                         ...-..++++|+|+.++++....     ..|..++..  ++...  ..+.+.               -.....+++ 
T Consensus       272 ---~~~~~~ia~dpdG~~LYvad~~~-----~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~  343 (433)
T 4hw6_A          272 ---KGSNFHIVWHPTGDWAYIIYNGK-----HCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFV  343 (433)
T ss_dssp             ---CSSCEEEEECTTSSEEEEEETTT-----TEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEE
T ss_pred             ---CCCcccEEEeCCCCEEEEEeCCC-----CEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEE
Confidence               01224699999999666554432     367775433  33211  111110               123667898 


Q ss_pred             --------cCCCCEEEEEeCCC-EEEEEc
Q psy7108         260 --------SPTGQAWVAATTEG-VHIYSL  279 (703)
Q Consensus       260 --------spdg~~l~s~s~Dg-v~iwd~  279 (703)
                              .++|+..++-.... |+.++.
T Consensus       344 ~n~~y~~dd~~g~lyvaD~~n~~I~~~~~  372 (433)
T 4hw6_A          344 KNEAYAGEEDEYDFYFCDRDSHTVRVLTP  372 (433)
T ss_dssp             ECGGGTTSSCCEEEEEEETTTTEEEEECT
T ss_pred             ccccccccCCCCcEEEEECCCCEEEEECC
Confidence                    66676555555555 888874

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=97.50  E-value=0.0042  Score=70.89  Aligned_cols=208  Identities=15%  Similarity=0.134  Sum_probs=128.1

Q ss_pred             CCcEEEEEcCCCceeEEEecCC---C----------------------------cEEEEEEecCCCEEEEEECCC-----
Q psy7108          70 DKTVKLWNAVETDTQHETIQLL---S----------------------------DALCVAYKPDGTEIVVATLDG-----  113 (703)
Q Consensus        70 Dg~V~iWd~~~~~~~~~~~~~~---~----------------------------~V~~v~~spdg~~las~s~dg-----  113 (703)
                      +|.|..+|..+++.........   .                            ....++++|++..++.++.++     
T Consensus       177 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~  256 (668)
T 1kv9_A          177 RGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNR  256 (668)
T ss_dssp             BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred             CCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCcccc
Confidence            5889999999998766554211   0                            012468888888888887766     


Q ss_pred             --------------eEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCC---EEEEEecCCc
Q psy7108         114 --------------QLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGS---CILAAGQSKY  176 (703)
Q Consensus       114 --------------~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~---~l~s~s~dg~  176 (703)
                                    .|..+|.++|+.+-.++....-.   ...+        ...+.....+..+|+   .++.++.+|.
T Consensus       257 ~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~---wd~~--------~~~~~~~~d~~~~G~~~~~v~~~~~~G~  325 (668)
T 1kv9_A          257 EVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDS---WDFT--------ATQQITLAELNIDGKPRKVLMQAPKNGF  325 (668)
T ss_dssp             HHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCC---SCCC--------CCSCEEEEEEEETTEEEEEEEECCTTSE
T ss_pred             CCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCcc---cccc--------CCCCcEEEEeccCCcEEEEEEEECCCCE
Confidence                          39999999999987776421100   0000        001222223334665   6888999999


Q ss_pred             EEEEECCCCceEEEEEeccC-----------Ccc-------ccc-----c-----ccceeeeeccCCCEEEEEccc----
Q psy7108         177 ICIYSSREGILLKKFTITQN-----------KSL-------DGI-----N-----DFINRRKMTEFGNVSLIETRE----  224 (703)
Q Consensus       177 I~lwD~~~~~~~~~~~~~~~-----------~~~-------~~~-----~-----~~v~~~~~spdg~~l~~~~~~----  224 (703)
                      ++++|.++|+.+........           ...       .+.     .     ..-..++++|+...+++...+    
T Consensus       326 l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~  405 (668)
T 1kv9_A          326 FYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGV  405 (668)
T ss_dssp             EEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEE
T ss_pred             EEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceE
Confidence            99999999998855432210           000       000     0     001236788887776653210    


Q ss_pred             ----------------C----------CCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEE
Q psy7108         225 ----------------T----------HEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIY  277 (703)
Q Consensus       225 ----------------~----------~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iw  277 (703)
                                      +          .......|..||..+++.+-+...+. ......+...+..+++++.|+ ++.|
T Consensus       406 ~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~~~~~t~gg~vf~g~~dg~l~a~  484 (668)
T 1kv9_A          406 YRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPT-HWNGGTLSTAGNLVFQGTAAGQMHAY  484 (668)
T ss_dssp             ECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEE
T ss_pred             eeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCC-CCcCceeEeCCCEEEEECCcccchhh
Confidence                            0          00012578889999998765554322 223334445677888899999 9999


Q ss_pred             EcCCCceeccee
Q psy7108         278 SLDSGYVFDPFL  289 (703)
Q Consensus       278 d~~~~~~~~~~~  289 (703)
                      |..+++.+-.+.
T Consensus       485 d~~tG~~l~~~~  496 (668)
T 1kv9_A          485 SADKGEALWQFE  496 (668)
T ss_dssp             ETTTCCEEEEEE
T ss_pred             hhhcChhheEec
Confidence            999998875554

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=97.49  E-value=0.023  Score=59.11  Aligned_cols=198  Identities=6%  Similarity=-0.020  Sum_probs=118.3

Q ss_pred             cCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEE-CCCeEEEEEcCCCcEE
Q psy7108          48 GPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVAT-LDGQLIMFDVESAAQV  126 (703)
Q Consensus        48 ~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s-~dg~I~vwd~~~~~~~  126 (703)
                      +..+|.+..+  ++ +|+.+. .+.|+..++... ....+......+..++|++.+..|+.+. ..+.|..++++.+...
T Consensus        34 d~~~C~~~~~--~~-~ll~~~-~~~I~~i~~~g~-~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~  108 (349)
T 3v64_C           34 DRRSCKALGP--EP-VLLFAN-RIDIRQVLPHRS-EYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE  108 (349)
T ss_dssp             TSSCEEESSS--CC-EEEEEC-BSCEEEECTTSC-CEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred             CCCccccccc--Cc-eeEeec-ccceEEEeCCCC-eeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCce
Confidence            3445666555  44 343333 346877787654 3344444555689999998777666554 5678999998866543


Q ss_pred             EEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEE-EecCCcEEEEECCCCceEEEEEeccCCcccccccc
Q psy7108         127 GSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILA-AGQSKYICIYSSREGILLKKFTITQNKSLDGINDF  205 (703)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s-~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~  205 (703)
                      ..+....                    .....+++.+.+..|.. -...+.|.+.++.......... ..       ...
T Consensus       109 ~~~~~~~--------------------~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~-~~-------l~~  160 (349)
T 3v64_C          109 EVVSTGL--------------------ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW-QS-------LEK  160 (349)
T ss_dssp             EEECSSC--------------------SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-TT-------CSC
T ss_pred             EEEeCCC--------------------CCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEe-CC-------CCC
Confidence            3332211                    13467888876555544 4556789999987543322221 11       124


Q ss_pred             ceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC--EEEEEcCCC
Q psy7108         206 INRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG--VHIYSLDSG  282 (703)
Q Consensus       206 v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg--v~iwd~~~~  282 (703)
                      ...++++|.+..++++....    ...|...++............-.....++++|++..|..+....  |..++++..
T Consensus       161 P~~iavdp~~g~ly~td~~~----~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~  235 (349)
T 3v64_C          161 PRAIALHPMEGTIYWTDWGN----TPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS  235 (349)
T ss_dssp             EEEEEEETTTTEEEEEECSS----SCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred             cceEEEecCcCeEEEeccCC----CCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence            57789999777666654321    12566666553322222222234578999999888876666544  888988753

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=97.42  E-value=0.039  Score=56.44  Aligned_cols=184  Identities=7%  Similarity=-0.043  Sum_probs=109.2

Q ss_pred             EEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEE-CCCeEEEEEcCCC---cE-EEEEeccccCCC
Q psy7108          63 GMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVAT-LDGQLIMFDVESA---AQ-VGSVEARRDLDS  137 (703)
Q Consensus        63 ~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s-~dg~I~vwd~~~~---~~-~~~~~~~~~~~~  137 (703)
                      +|+.+.. ..|+..|+.+.. ...+......+.+++|++++..|+.+. .++.|..+++++.   .. ...+...     
T Consensus         3 ~ll~~~~-~~I~~i~~~~~~-~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~-----   75 (316)
T 1ijq_A            3 YLFFTNR-HEVRKMTLDRSE-YTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD-----   75 (316)
T ss_dssp             EEEEECB-SSEEEEETTSCC-CEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSS-----
T ss_pred             EEEEECC-CeEEEEECCCcc-eEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCC-----
Confidence            3444433 468888987764 334445556788999999776666554 4688999998751   21 1122111     


Q ss_pred             CCCCCccchhhcccCCccEEEEEEcCCCCEEEE-EecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCC
Q psy7108         138 GRLDTDLVTREQSLKAKAVSTVCYSADGSCILA-AGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGN  216 (703)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s-~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~  216 (703)
                                     ......+++++.+..|.. -...+.|.+.|+............        ......++++|.+.
T Consensus        76 ---------------~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~--------~~~P~~iavdp~~g  132 (316)
T 1ijq_A           76 ---------------IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREN--------GSKPRAIVVDPVHG  132 (316)
T ss_dssp             ---------------CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECT--------TCCEEEEEEETTTT
T ss_pred             ---------------CCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECC--------CCCcceEEeCCCCC
Confidence                           013467888875555554 456788999998754333222211        12457889999777


Q ss_pred             EEEEEcccCCCCCeeEEECCCCCCCccceeec-CCccceEEEEEcCCCCEEEEEeCCC--EEEEEcCC
Q psy7108         217 VSLIETRETHEGGNVVLKLPGVKKGDMAARVL-KPEVRVFCVKFSPTGQAWVAATTEG--VHIYSLDS  281 (703)
Q Consensus       217 ~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~-~h~~~V~~l~~spdg~~l~s~s~Dg--v~iwd~~~  281 (703)
                      .++++....    ...|...++.. .....+. ..-.....++++|++..|..+....  |..++++.
T Consensus       133 ~ly~~d~~~----~~~I~~~~~dG-~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg  195 (316)
T 1ijq_A          133 FMYWTDWGT----PAKIKKGGLNG-VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG  195 (316)
T ss_dssp             EEEEEECSS----SCEEEEEETTS-CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred             EEEEEccCC----CCeEEEEcCCC-CCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCC
Confidence            666654321    12566655542 2222222 2234578999999888886666543  88999874

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=97.35  E-value=0.0039  Score=71.13  Aligned_cols=207  Identities=15%  Similarity=0.159  Sum_probs=126.4

Q ss_pred             CCEEEEEeCCCcEEEEEcCCCceeEEEecCCC----------cE-EEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEE
Q psy7108          61 STGMVSASWDKTVKLWNAVETDTQHETIQLLS----------DA-LCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSV  129 (703)
Q Consensus        61 g~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~----------~V-~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~  129 (703)
                      +..++.++.++.|..+|..+++...+......          .+ ..+++  ++..+++++.|+.|..+|..+|+.+-.+
T Consensus        66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~  143 (668)
T 1kv9_A           66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQ  143 (668)
T ss_dssp             TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred             CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeeee
Confidence            45677777889999999999977655532211          01 11233  3567888889999999999999998777


Q ss_pred             eccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec------CCcEEEEECCCCceEEEEEeccCCccc---
Q psy7108         130 EARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ------SKYICIYSSREGILLKKFTITQNKSLD---  200 (703)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~------dg~I~lwD~~~~~~~~~~~~~~~~~~~---  200 (703)
                      .........           .....++  +  . ++ .+++++.      ++.|..+|.++|+.+-++.........   
T Consensus       144 ~~~~~~~~~-----------~~~~~P~--v--~-~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~  206 (668)
T 1kv9_A          144 QTTDPAKPY-----------SITGAPR--V--V-KG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYE  206 (668)
T ss_dssp             ECSCTTSSC-----------BCCSCCE--E--E-TT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCS
T ss_pred             ccCCCCCcc-----------eecCCCE--E--E-CC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCcccc
Confidence            653210000           0000111  1  1 33 4555433      589999999999998887642211000   


Q ss_pred             --------------------cccccceeeeeccCCCEEEEEcccCCC---------CC----eeEEECCCCCCCccceee
Q psy7108         201 --------------------GINDFINRRKMTEFGNVSLIETRETHE---------GG----NVVLKLPGVKKGDMAARV  247 (703)
Q Consensus       201 --------------------~~~~~v~~~~~spdg~~l~~~~~~~~~---------~~----~~~i~iwd~~~~~~~~~~  247 (703)
                                          +.......++++|++..+++++.++..         .+    ...|.-+|.++|+.+-..
T Consensus       207 ~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~  286 (668)
T 1kv9_A          207 HPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHY  286 (668)
T ss_dssp             SHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEE
T ss_pred             ccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEe
Confidence                                001112346788888888877654310         00    015888899999877655


Q ss_pred             cC--Cc-------cceEEEEEcCCCC---EEEEEeCCC-EEEEEcCCCceec
Q psy7108         248 LK--PE-------VRVFCVKFSPTGQ---AWVAATTEG-VHIYSLDSGYVFD  286 (703)
Q Consensus       248 ~~--h~-------~~V~~l~~spdg~---~l~s~s~Dg-v~iwd~~~~~~~~  286 (703)
                      ..  |.       .++....+..+|+   .++.++.+| ++++|..+|+.+.
T Consensus       287 ~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~  338 (668)
T 1kv9_A          287 QVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLIS  338 (668)
T ss_dssp             ESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEE
T ss_pred             ecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEec
Confidence            43  22       2222233334665   678888999 9999999998763

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=97.34  E-value=0.017  Score=62.10  Aligned_cols=222  Identities=10%  Similarity=0.068  Sum_probs=116.7

Q ss_pred             ceeecc-CCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCC---Cc-EEEEEcCCCceeEEEecCCCcEEEEEEec-
Q psy7108          28 VKKGDM-AARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWD---KT-VKLWNAVETDTQHETIQLLSDALCVAYKP-  101 (703)
Q Consensus        28 v~~~d~-tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~D---g~-V~iWd~~~~~~~~~~~~~~~~V~~v~~sp-  101 (703)
                      ++..+. +++.   ..+.+......++++++  +|+++++....   .. +...+...+.........-.....++++| 
T Consensus       164 I~~id~~~g~v---~~~~~~~~~P~giavd~--dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~~~~~P~giavd~~  238 (433)
T 4hw6_A          164 FRHVDFVNQYV---DIKTTNIGQCADVNFTL--NGDMVVVDDQSSDTNTGIYLFTRASGFTERLSLCNARGAKTCAVHPQ  238 (433)
T ss_dssp             EEEEETTTTEE---EEECCCCSCEEEEEECT--TCCEEEEECCSCTTSEEEEEECGGGTTCCEEEEEECSSBCCCEECTT
T ss_pred             EEEEECCCCEE---EEeecCCCCccEEEECC--CCCEEEEcCCCCcccceEEEEECCCCeeccccccccCCCCEEEEeCC
Confidence            445564 4443   34444455689999999  89855554321   11 22223222211111222234456788999 


Q ss_pred             CCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEE-ecCCcEEEE
Q psy7108         102 DGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAA-GQSKYICIY  180 (703)
Q Consensus       102 dg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~-s~dg~I~lw  180 (703)
                      +|...++-..++.|+.+|..++.....+.....                  ...-..++|+|+|+.|..+ ...+.|..+
T Consensus       239 ~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~------------------~~~~~~ia~dpdG~~LYvad~~~~~I~~~  300 (433)
T 4hw6_A          239 NGKIYYTRYHHAMISSYDPATGTLTEEEVMMDT------------------KGSNFHIVWHPTGDWAYIIYNGKHCIYRV  300 (433)
T ss_dssp             TCCEEECBTTCSEEEEECTTTCCEEEEEEECSC------------------CSSCEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred             CCeEEEEECCCCEEEEEECCCCeEEEEEeccCC------------------CCCcccEEEeCCCCEEEEEeCCCCEEEEE
Confidence            666555555678899999987766333321110                  0022469999999966555 456789998


Q ss_pred             ECC--CCce--EEEEEeccCC--cccc-----ccccceeeee---------ccCCCEEEEEcccCCCCCeeEEECCCCCC
Q psy7108         181 SSR--EGIL--LKKFTITQNK--SLDG-----INDFINRRKM---------TEFGNVSLIETRETHEGGNVVLKLPGVKK  240 (703)
Q Consensus       181 D~~--~~~~--~~~~~~~~~~--~~~~-----~~~~v~~~~~---------spdg~~l~~~~~~~~~~~~~~i~iwd~~~  240 (703)
                      |..  ++..  ...+.+....  ..++     .......+++         .++|..+++....      ..|+.++. +
T Consensus       301 ~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n------~~I~~~~~-~  373 (433)
T 4hw6_A          301 DYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDS------HTVRVLTP-E  373 (433)
T ss_dssp             EBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTT------TEEEEECT-T
T ss_pred             eCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCC------CEEEEECC-C
Confidence            865  3321  1233332110  0011     1123456788         6666666654443      36777774 3


Q ss_pred             CccceeecCC------------------ccceEEEEEc-CCCCEEEEEeCCC-EEEEEcC
Q psy7108         241 GDMAARVLKP------------------EVRVFCVKFS-PTGQAWVAATTEG-VHIYSLD  280 (703)
Q Consensus       241 ~~~~~~~~~h------------------~~~V~~l~~s-pdg~~l~s~s~Dg-v~iwd~~  280 (703)
                      |... .+.+.                  -.....++++ ++|..+++-..+. |+.++++
T Consensus       374 G~v~-t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e  432 (433)
T 4hw6_A          374 GRVT-TYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE  432 (433)
T ss_dssp             SEEE-EEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred             CCEE-EEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence            4222 22111                  1236788998 4555444444444 7776653

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=97.30  E-value=0.014  Score=65.28  Aligned_cols=216  Identities=9%  Similarity=0.021  Sum_probs=128.6

Q ss_pred             CEEEEEeC------CCcEEEEEcCCCceeEEEecCCCc-------------------------------------E-EEE
Q psy7108          62 TGMVSASW------DKTVKLWNAVETDTQHETIQLLSD-------------------------------------A-LCV   97 (703)
Q Consensus        62 ~~L~sgs~------Dg~V~iWd~~~~~~~~~~~~~~~~-------------------------------------V-~~v   97 (703)
                      ..++.++.      ++.|..+|..+++...+.......                                     + ..+
T Consensus       161 g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~  240 (571)
T 2ad6_A          161 DTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWY  240 (571)
T ss_dssp             TEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCC
T ss_pred             CEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeE
Confidence            35555544      789999999999776554432110                                     0 135


Q ss_pred             EEecCCCEEEEEECC----------------CeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEE
Q psy7108          98 AYKPDGTEIVVATLD----------------GQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCY  161 (703)
Q Consensus        98 ~~spdg~~las~s~d----------------g~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~  161 (703)
                      ++.++...++.++.+                +.|..+|.++|+.+-.++....-        .+  .......++. +..
T Consensus       241 a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d--------~~--d~~~~~~p~l-~~~  309 (571)
T 2ad6_A          241 AYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHD--------EW--DFAGVNQMVL-TDQ  309 (571)
T ss_dssp             EEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTC--------SS--CCCCCCCCEE-EEE
T ss_pred             EEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCc--------cc--ccccCCCCEE-Eec
Confidence            677777777766532                35999999999988776643110        00  0000011222 222


Q ss_pred             cCCCC---EEEEEecCCcEEEEECCCCceEEEEEeccCCc----cc---cc-------------cc-----------cce
Q psy7108         162 SADGS---CILAAGQSKYICIYSSREGILLKKFTITQNKS----LD---GI-------------ND-----------FIN  207 (703)
Q Consensus       162 spdg~---~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~----~~---~~-------------~~-----------~v~  207 (703)
                      .++|+   .++.++.+|.+.++|.++++.+..+.......    ++   +.             ..           .-.
T Consensus       310 ~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~  389 (571)
T 2ad6_A          310 PVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQG  389 (571)
T ss_dssp             EETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSC
T ss_pred             ccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCC
Confidence            35674   56778889999999999999887765432100    00   00             00           003


Q ss_pred             eeeeccCCCEEEEEccc--------------CC-------------C----CCeeEEECCCCCCCccceeecCCccceEE
Q psy7108         208 RRKMTEFGNVSLIETRE--------------TH-------------E----GGNVVLKLPGVKKGDMAARVLKPEVRVFC  256 (703)
Q Consensus       208 ~~~~spdg~~l~~~~~~--------------~~-------------~----~~~~~i~iwd~~~~~~~~~~~~h~~~V~~  256 (703)
                      .++++|+...+++.+.+              +.             .    .....+..||..+++.+-+.... ..+.+
T Consensus       390 ~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~-~~~~~  468 (571)
T 2ad6_A          390 VDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEK-FAAWG  468 (571)
T ss_dssp             BCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEES-SCCCS
T ss_pred             CceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCC-CCccc
Confidence            46788888877775431              00             0    12357889999999876555422 12222


Q ss_pred             EEEcCCCCEEEEEeCCC-EEEEEcCCCceeccee
Q psy7108         257 VKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPFL  289 (703)
Q Consensus       257 l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~~  289 (703)
                      ......+..++.++.|+ ++.+|..+|+.+-.+.
T Consensus       469 ~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~  502 (571)
T 2ad6_A          469 GTLYTKGGLVWYATLDGYLKALDNKDGKELWNFK  502 (571)
T ss_dssp             BCEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred             eeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEe
Confidence            22233456777788999 9999999999876554

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=97.28  E-value=0.027  Score=59.47  Aligned_cols=195  Identities=6%  Similarity=-0.010  Sum_probs=116.3

Q ss_pred             EEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEE-CCCeEEEEEcCCCcEEEEE
Q psy7108          51 SCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVAT-LDGQLIMFDVESAAQVGSV  129 (703)
Q Consensus        51 ~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s-~dg~I~vwd~~~~~~~~~~  129 (703)
                      +|.+..+  .+ +|+.+. ...|+..++.... ...+......+..++|++.+..|+.+. ..+.|..++++.+.....+
T Consensus        80 ~C~~~~~--~~-~l~~~~-~~~I~~i~~~~~~-~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~  154 (386)
T 3v65_B           80 SCKALGP--EP-VLLFAN-RIDIRQVLPHRSE-YTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV  154 (386)
T ss_dssp             CEEECSS--CC-EEEEEC-BSCEEEECTTSCC-CEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEE
T ss_pred             eECCccc--cc-eeEeec-CccceeeccCCCc-EEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEE
Confidence            4444444  33 444433 3568888876553 344445556688999998776666554 5678999998876543333


Q ss_pred             eccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEE-EecCCcEEEEECCCCceEEEEEeccCCcccccccccee
Q psy7108         130 EARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILA-AGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINR  208 (703)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s-~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~  208 (703)
                      .....                    ....+++++.+..|.. -...+.|.+.++........+...        ......
T Consensus       155 ~~~~~--------------------~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~--------l~~P~g  206 (386)
T 3v65_B          155 STGLE--------------------SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQS--------LEKPRA  206 (386)
T ss_dssp             CSSCS--------------------CCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSS--------CSCEEE
T ss_pred             eCCCC--------------------CccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCC--------CCCCcE
Confidence            22111                    3356888876555554 445678888888754332222111        124577


Q ss_pred             eeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC--EEEEEcCCC
Q psy7108         209 RKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG--VHIYSLDSG  282 (703)
Q Consensus       209 ~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg--v~iwd~~~~  282 (703)
                      ++++|.+..++++....    ...|...+.............-.....++++|++..|..+....  |..++++..
T Consensus       207 iavdp~~g~ly~td~~~----~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~  278 (386)
T 3v65_B          207 IALHPMEGTIYWTDWGN----TPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS  278 (386)
T ss_dssp             EEEETTTTEEEEEECSS----SCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSC
T ss_pred             EEEEcCCCeEEEeccCC----CCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence            89999877776654321    12566666554322222222334578999999888876665544  888887653

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=97.28  E-value=0.048  Score=55.46  Aligned_cols=214  Identities=12%  Similarity=0.053  Sum_probs=123.0

Q ss_pred             eEEEEEcCCCCCCEEEEEe-CCCcEEEEEcCCCceeEEEecC-----C--CcEEEEEE---ecCCCEEEEEEC-------
Q psy7108          50 VSCIEFSPVLSSTGMVSAS-WDKTVKLWNAVETDTQHETIQL-----L--SDALCVAY---KPDGTEIVVATL-------  111 (703)
Q Consensus        50 V~~l~~sp~~dg~~L~sgs-~Dg~V~iWd~~~~~~~~~~~~~-----~--~~V~~v~~---spdg~~las~s~-------  111 (703)
                      --+++|++  ....|..++ ..++|..|+...+.........     .  ..+..+.|   .|+++++++...       
T Consensus        15 PE~~~wd~--~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~   92 (334)
T 2p9w_A           15 PEDTIYDR--TRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFA   92 (334)
T ss_dssp             CSCEEEET--TTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTT
T ss_pred             CcCccCcC--CCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccc
Confidence            34689988  455555554 7899999998755332222222     1  13578999   688777776432       


Q ss_pred             ------CCeEEEEEcC---CCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC-CcEEEEE
Q psy7108         112 ------DGQLIMFDVE---SAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS-KYICIYS  181 (703)
Q Consensus       112 ------dg~I~vwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d-g~I~lwD  181 (703)
                            +..|..+|+.   +++.+....-..-.       ................++..++|+..++++.. +.|...+
T Consensus        93 g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~-------~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~  165 (334)
T 2p9w_A           93 DQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQ-------DEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVS  165 (334)
T ss_dssp             SCCSSSCCEEEEEESSCCTTCCCSEEEESHHHH-------HHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEEC
T ss_pred             ccccCCCCEEEEEcCCcCCCCCEEEEecCcccc-------ccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEe
Confidence                  5779999998   77766554421100       00000000011247899999999999998888 8888888


Q ss_pred             CCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcc--ceeec-CC---ccceE
Q psy7108         182 SREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDM--AARVL-KP---EVRVF  255 (703)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~--~~~~~-~h---~~~V~  255 (703)
                      .... ....+......  .......+.++++|+|..+++....+      .+..+|+.+...  +.... +.   -....
T Consensus       166 pdG~-~~~~~~~~~~~--~~~~~G~nGIv~~pdg~~Liv~~~~g------~L~~fD~~~pv~~~v~~~~~G~~~~~~~~d  236 (334)
T 2p9w_A          166 ADGK-TVSTFAWESGN--GGQRPGYSGITFDPHSNKLIAFGGPR------ALTAFDVSKPYAWPEPVKINGDFGTLSGTE  236 (334)
T ss_dssp             TTSC-CEEEEEECCCC--SSSCCSCSEEEEETTTTEEEEESSSS------SEEEEECSSSSCCCEECEESSCCCCCTTEE
T ss_pred             CCCC-EEeeeeecCCC--cccccCcceEEEeCCCCEEEEEcCCC------eEEEEcCCCCcceeecccccCCcccccCcc
Confidence            7644 33433322211  11123467899999999888876632      566677663222  11110 11   11233


Q ss_pred             E-EEEcCCCCEE-EEEeCCC-EEEEEcCC
Q psy7108         256 C-VKFSPTGQAW-VAATTEG-VHIYSLDS  281 (703)
Q Consensus       256 ~-l~~spdg~~l-~s~s~Dg-v~iwd~~~  281 (703)
                      . +..-.+|+.+ ++.+..+ +.+.+.+.
T Consensus       237 gilp~~~~G~vllV~~~~~~~~~l~S~Dg  265 (334)
T 2p9w_A          237 KIVTVPVGNESVLVGARAPYAISFRSWDN  265 (334)
T ss_dssp             EEEEEEETTEEEEEEEETTEEEEEECSST
T ss_pred             cccccccCCEEEEEEcCCCCEEEEECCCC
Confidence            3 3333477774 5555556 55666554

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=97.24  E-value=0.073  Score=56.39  Aligned_cols=187  Identities=8%  Similarity=-0.018  Sum_probs=113.4

Q ss_pred             CEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEE-CCCeEEEEEcCCCc----EEEEEeccccCC
Q psy7108          62 TGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVAT-LDGQLIMFDVESAA----QVGSVEARRDLD  136 (703)
Q Consensus        62 ~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s-~dg~I~vwd~~~~~----~~~~~~~~~~~~  136 (703)
                      .+|+.+. ...|+..++.... ...+......+..++|++.+..|+.+. ..+.|+.++++...    ....+...    
T Consensus        84 ~~ll~~~-~~~I~~i~l~~~~-~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~----  157 (400)
T 3p5b_L           84 AYLFFTN-RHEVRKMTLDRSE-YTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD----  157 (400)
T ss_dssp             CEEEEEE-TTEEEEECTTSCS-CEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSS----
T ss_pred             ceeEEec-cceeEEEccCCcc-eeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCC----
Confidence            3454444 3678888887653 344455667789999999777776654 46788888886522    22222211    


Q ss_pred             CCCCCCccchhhcccCCccEEEEEEcCCCCEEEE-EecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCC
Q psy7108         137 SGRLDTDLVTREQSLKAKAVSTVCYSADGSCILA-AGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFG  215 (703)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s-~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg  215 (703)
                                      ......+++.+.+..|.. -...+.|.+.|+........+...        ......+++.|.+
T Consensus       158 ----------------~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~--------~~~P~~iavdp~~  213 (400)
T 3p5b_L          158 ----------------IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREN--------GSKPRAIVVDPVH  213 (400)
T ss_dssp             ----------------CSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECS--------SCCEEEEEEETTT
T ss_pred             ----------------CCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCC--------CCCcceEEEeccc
Confidence                            125678999885555554 455678999998865443333211        1245778999977


Q ss_pred             CEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC--EEEEEcCCC
Q psy7108         216 NVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG--VHIYSLDSG  282 (703)
Q Consensus       216 ~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg--v~iwd~~~~  282 (703)
                      ..++++.... .   ..|...++............-.....++++|++..|..+....  |..++++..
T Consensus       214 g~ly~td~~~-~---~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~  278 (400)
T 3p5b_L          214 GFMYWTDWGT-P---AKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG  278 (400)
T ss_dssp             TEEEEEECSS-S---CCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred             CeEEEEeCCC-C---CEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCC
Confidence            7666654321 1   2466666543332222222335678999999888887776544  888888654

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=97.20  E-value=0.058  Score=53.08  Aligned_cols=167  Identities=8%  Similarity=0.057  Sum_probs=104.9

Q ss_pred             cCCCcEEEEEEecCCCEEE-EEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCE
Q psy7108          89 QLLSDALCVAYKPDGTEIV-VATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSC  167 (703)
Q Consensus        89 ~~~~~V~~v~~spdg~~la-s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~  167 (703)
                      +..+.+..++|+|++..|+ +...++.|...|.. ++.++.+.-..                   ......+++.+++.+
T Consensus        24 g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g-------------------~~D~EGIa~~~~g~~   83 (255)
T 3qqz_A           24 GITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDF-------------------VKDLETIEYIGDNQF   83 (255)
T ss_dssp             TCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSS-------------------CSSEEEEEECSTTEE
T ss_pred             CcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCC-------------------CCChHHeEEeCCCEE
Confidence            3456799999999877555 56678889999998 88777764321                   114778999999987


Q ss_pred             EEEEecCCcEEEEECCCCceE---EEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCC-CCCcc
Q psy7108         168 ILAAGQSKYICIYSSREGILL---KKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGV-KKGDM  243 (703)
Q Consensus       168 l~s~s~dg~I~lwD~~~~~~~---~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~-~~~~~  243 (703)
                      +++.-.++.+.++++.....+   ........  ....+.....++++|.++.++++...+    ...+..|+- .....
T Consensus        84 ~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~--~~~~N~g~EGLA~d~~~~~L~va~E~~----p~~i~~~~g~~~~~~  157 (255)
T 3qqz_A           84 VISDERDYAIYVISLTPNSEVKILKKIKIPLQ--ESPTNCGFEGLAYSRQDHTFWFFKEKN----PIEVYKVNGLLSSNE  157 (255)
T ss_dssp             EEEETTTTEEEEEEECTTCCEEEEEEEECCCS--SCCCSSCCEEEEEETTTTEEEEEEESS----SEEEEEEESTTCSSC
T ss_pred             EEEECCCCcEEEEEcCCCCeeeeeeeeccccc--cccccCCcceEEEeCCCCEEEEEECcC----CceEEEEcccccCCc
Confidence            777667788999998765432   22221110  011233568899999998877766432    124554541 11111


Q ss_pred             ceeec-------CCccceEEEEEcCCCCEEEEEeCCC--EEEEEcCC
Q psy7108         244 AARVL-------KPEVRVFCVKFSPTGQAWVAATTEG--VHIYSLDS  281 (703)
Q Consensus       244 ~~~~~-------~h~~~V~~l~~spdg~~l~s~s~Dg--v~iwd~~~  281 (703)
                      .....       .+-..+.+++++|....+...+.++  +.++|.+.
T Consensus       158 l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g  204 (255)
T 3qqz_A          158 LHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVG  204 (255)
T ss_dssp             CEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTC
T ss_pred             eeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCC
Confidence            11111       1234578999999877766555555  77777653

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=97.20  E-value=0.0092  Score=64.13  Aligned_cols=151  Identities=11%  Similarity=0.147  Sum_probs=92.3

Q ss_pred             cEEEEEEec-CCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEE
Q psy7108          93 DALCVAYKP-DGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAA  171 (703)
Q Consensus        93 ~V~~v~~sp-dg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~  171 (703)
                      ....++++| ++..|+++...+.|+.+|++++........                     ......++|+++|+.|+++
T Consensus       138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~---------------------~~~P~~ia~d~~G~~lyva  196 (430)
T 3tc9_A          138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSG---------------------LSKVRTICWTHEADSMIIT  196 (430)
T ss_dssp             CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECC---------------------CSCEEEEEECTTSSEEEEE
T ss_pred             CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecC---------------------CCCcceEEEeCCCCEEEEE
Confidence            457889998 466676666668899999987665443331                     1257899999999966666


Q ss_pred             ecC-C----cEEEEECCCCceE--EEEEeccCCccccccccceeeeecc-CCCEEEEEcccCCCCCeeEEECCCCCCCcc
Q psy7108         172 GQS-K----YICIYSSREGILL--KKFTITQNKSLDGINDFINRRKMTE-FGNVSLIETRETHEGGNVVLKLPGVKKGDM  243 (703)
Q Consensus       172 s~d-g----~I~lwD~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~sp-dg~~l~~~~~~~~~~~~~~i~iwd~~~~~~  243 (703)
                      ... +    .+...+.. +...  ..+..         ......++++| +|..+++....      ..|..++...+..
T Consensus       197 d~~~~~~~~~v~~~~~~-g~~~~~~~l~~---------~~~p~giavdp~~g~lyv~d~~~------~~V~~~~~~~~~~  260 (430)
T 3tc9_A          197 NDQNNNDRPNNYILTRE-SGFKVITELTK---------GQNCNGAETHPINGELYFNSWNA------GQVFRYDFTTQET  260 (430)
T ss_dssp             ECCSCTTSEEEEEEEGG-GTSCSEEEEEE---------CSSCCCEEECTTTCCEEEEETTT------TEEEEEETTTTEE
T ss_pred             eCCCCcccceEEEEeCC-Cceeeeeeecc---------CCCceEEEEeCCCCEEEEEECCC------CEEEEEECCCCcE
Confidence            542 1    24444433 2221  22211         12456788999 66655554433      2688888776543


Q ss_pred             ceeec-CCccceEEEEEcCCCCEEEEEeCC-C-EEEEEcC
Q psy7108         244 AARVL-KPEVRVFCVKFSPTGQAWVAATTE-G-VHIYSLD  280 (703)
Q Consensus       244 ~~~~~-~h~~~V~~l~~spdg~~l~s~s~D-g-v~iwd~~  280 (703)
                      ..... ........++|+|+|++|..+... + |..++.+
T Consensus       261 ~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d  300 (430)
T 3tc9_A          261 TPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD  300 (430)
T ss_dssp             EEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred             EEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence            22221 122356789999999977665544 4 8887765

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=97.12  E-value=0.083  Score=61.30  Aligned_cols=201  Identities=11%  Similarity=0.087  Sum_probs=124.1

Q ss_pred             CcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEe------c---CCCcEEEEEEecCCCEEEEEECCCeEEE
Q psy7108          47 EGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETI------Q---LLSDALCVAYKPDGTEIVVATLDGQLIM  117 (703)
Q Consensus        47 ~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~------~---~~~~V~~v~~spdg~~las~s~dg~I~v  117 (703)
                      ...|.++...+  +|. |-.|+.++-|..++..+........      .   ....|.+++..++|.. ..|+.++-|..
T Consensus       312 ~~~v~~i~~D~--~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~l-Wigt~~~Gl~~  387 (781)
T 3v9f_A          312 NASARYIFQDS--FNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKL-WIGTDGGGINV  387 (781)
T ss_dssp             SSCEEEEEECS--SCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCE-EEEEBSSCEEE
T ss_pred             CCeEEEEEEeC--CCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCE-EEEeCCCcEEE
Confidence            46799999988  776 4456666678888876543211110      0   2356899998888764 45666677899


Q ss_pred             EEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCC
Q psy7108         118 FDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNK  197 (703)
Q Consensus       118 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~  197 (703)
                      ||..+++... +....                ......|.++...++|...+ |+.++-+..+|.++++.. .+...   
T Consensus       388 ~~~~~~~~~~-~~~~~----------------~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~-~~~~~---  445 (781)
T 3v9f_A          388 FENGKRVAIY-NKENR----------------ELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQ-IIELE---  445 (781)
T ss_dssp             EETTEEEEEC-C---------------------CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEE-ECCST---
T ss_pred             EECCCCeEEE-ccCCC----------------CCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEE-EeccC---
Confidence            9976543221 11000                11234799999888887554 666667999998876532 22111   


Q ss_pred             ccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCC-----ccceEEEEEcCCCCEEEEEeCC
Q psy7108         198 SLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKP-----EVRVFCVKFSPTGQAWVAATTE  272 (703)
Q Consensus       198 ~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h-----~~~V~~l~~spdg~~l~s~s~D  272 (703)
                        ......|.++...++|...+.+. .       -+..+|..+++........     ...|.++...++|+..+....+
T Consensus       446 --~~~~~~v~~i~~d~~g~lwigt~-~-------Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~  515 (781)
T 3v9f_A          446 --KNELLDVRVFYEDKNKKIWIGTH-A-------GVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGG  515 (781)
T ss_dssp             --TTCCCCEEEEEECTTSEEEEEET-T-------EEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSS
T ss_pred             --CCCCCeEEEEEECCCCCEEEEEC-C-------ceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCC
Confidence              01123677888888877555433 3       3777877766543322211     4578999999999876655546


Q ss_pred             CEEEEEcCCCc
Q psy7108         273 GVHIYSLDSGY  283 (703)
Q Consensus       273 gv~iwd~~~~~  283 (703)
                      |+..|+..+++
T Consensus       516 Gl~~~~~~~~~  526 (781)
T 3v9f_A          516 GVGIYTPDMQL  526 (781)
T ss_dssp             CEEEECTTCCE
T ss_pred             CEEEEeCCCCe
Confidence            78889877654

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=97.10  E-value=0.034  Score=62.18  Aligned_cols=180  Identities=14%  Similarity=0.123  Sum_probs=105.8

Q ss_pred             EEEecCCCEEEEEEC--------------------C----CeEEEEEcCCCcEEEEEeccc-cCCCCCCCCccchhhccc
Q psy7108          97 VAYKPDGTEIVVATL--------------------D----GQLIMFDVESAAQVGSVEARR-DLDSGRLDTDLVTREQSL  151 (703)
Q Consensus        97 v~~spdg~~las~s~--------------------d----g~I~vwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  151 (703)
                      ++++|+...++.++.                    |    +.|..+|.++|+.+-.++... +...           ...
T Consensus       251 ~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd-----------~~~  319 (582)
T 1flg_A          251 ASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWD-----------FSG  319 (582)
T ss_dssp             CEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSC-----------CCC
T ss_pred             ceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCccc-----------ccC
Confidence            566777777777663                    2    589999999999987775421 1000           000


Q ss_pred             CCccEEEEEEc-CCCC---EEEEEecCCcEEEEECCCCceEEEEEeccCCc-------------------cc-------c
Q psy7108         152 KAKAVSTVCYS-ADGS---CILAAGQSKYICIYSSREGILLKKFTITQNKS-------------------LD-------G  201 (703)
Q Consensus       152 ~~~~V~~i~~s-pdg~---~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~-------------------~~-------~  201 (703)
                      ...++. +... .+|+   .++.++.+|.++++|.++|+.+..+.......                   ..       .
T Consensus       320 ~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~  398 (582)
T 1flg_A          320 NNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKH  398 (582)
T ss_dssp             CCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSS
T ss_pred             CCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccC
Confidence            011222 2222 4674   67788999999999999999887765432100                   00       0


Q ss_pred             ccc-----------cceeeeeccCCCEEEEEccc--------------CC-------------CCCeeEEECCCCCCCcc
Q psy7108         202 IND-----------FINRRKMTEFGNVSLIETRE--------------TH-------------EGGNVVLKLPGVKKGDM  243 (703)
Q Consensus       202 ~~~-----------~v~~~~~spdg~~l~~~~~~--------------~~-------------~~~~~~i~iwd~~~~~~  243 (703)
                      ...           .-..++++|+...+++....              +.             ......+.-||+.+++.
T Consensus       399 ~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~  478 (582)
T 1flg_A          399 GKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKV  478 (582)
T ss_dssp             CCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCE
T ss_pred             CCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCE
Confidence            000           01245667766655554321              00             01125788999999987


Q ss_pred             ceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceeccee
Q psy7108         244 AARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPFL  289 (703)
Q Consensus       244 ~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~~  289 (703)
                      +-+..... .+..-.....+..++.++.|+ ++.||.++|+.+-.+.
T Consensus       479 ~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~  524 (582)
T 1flg_A          479 VWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQ  524 (582)
T ss_dssp             EEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred             EEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEec
Confidence            65544221 111111122466777899999 9999999999876554

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=97.05  E-value=0.031  Score=62.44  Aligned_cols=198  Identities=13%  Similarity=0.117  Sum_probs=115.1

Q ss_pred             EEEEEcCCCCCCEEEEEeC--------------------C----CcEEEEEcCCCceeEEEec--CC--------CcEEE
Q psy7108          51 SCIEFSPVLSSTGMVSASW--------------------D----KTVKLWNAVETDTQHETIQ--LL--------SDALC   96 (703)
Q Consensus        51 ~~l~~sp~~dg~~L~sgs~--------------------D----g~V~iWd~~~~~~~~~~~~--~~--------~~V~~   96 (703)
                      ..++++|  +..+++.+..                    |    +.|..+|..+++.......  |.        .++. 
T Consensus       249 ~~~a~d~--~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-  325 (582)
T 1flg_A          249 QSASFDA--ETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-  325 (582)
T ss_dssp             SCCEEET--TTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-
T ss_pred             CCceEcC--CCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-
Confidence            3567888  7777776652                    2    5799999999977665543  21        1222 


Q ss_pred             EEEe-cCCC---EEEEEECCCeEEEEEcCCCcEEEEEeccccCC--------CCCCC------C-----------ccchh
Q psy7108          97 VAYK-PDGT---EIVVATLDGQLIMFDVESAAQVGSVEARRDLD--------SGRLD------T-----------DLVTR  147 (703)
Q Consensus        97 v~~s-pdg~---~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~--------~~~~~------~-----------~~~~~  147 (703)
                      +... .+|+   .++.++.+|.++++|.++|+.+..........        .++..      .           .....
T Consensus       326 ~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~  405 (582)
T 1flg_A          326 FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVS  405 (582)
T ss_dssp             EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEES
T ss_pred             EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEEC
Confidence            2222 4674   67888999999999999999987766543110        00000      0           00000


Q ss_pred             hcccCCccEEEEEEcCCCCEEEEEe---------------------------------cCCcEEEEECCCCceEEEEEec
Q psy7108         148 EQSLKAKAVSTVCYSADGSCILAAG---------------------------------QSKYICIYSSREGILLKKFTIT  194 (703)
Q Consensus       148 ~~~~~~~~V~~i~~spdg~~l~s~s---------------------------------~dg~I~lwD~~~~~~~~~~~~~  194 (703)
                      +..........++++|+...+++..                                 .++.|..||+.+++.+-+....
T Consensus       406 P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~  485 (582)
T 1flg_A          406 PPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEH  485 (582)
T ss_dssp             SCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEES
T ss_pred             cCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCC
Confidence            0000011112456677655544432                                 2578999999999887666532


Q ss_pred             cCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccce-EEEEEcCCCCEE
Q psy7108         195 QNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRV-FCVKFSPTGQAW  266 (703)
Q Consensus       195 ~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V-~~l~~spdg~~l  266 (703)
                      .         ....-.....+..+++++.++      .++.+|.++|+.+.++....... .-+.+..+|+..
T Consensus       486 ~---------~~~~g~~~tagglvf~g~~dg------~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qY  543 (582)
T 1flg_A          486 L---------PLWAGVLATAGNLVFTGTGDG------YFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQY  543 (582)
T ss_dssp             S---------CCCSCCEEETTTEEEEECTTS------EEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred             C---------CCcccceEeCCCEEEEECCCC------cEEEEECCCCCEEEEecCCCCcccCceEEEECCEEE
Confidence            2         111222233456666666543      89999999999887776543221 225566777644

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=96.99  E-value=0.03  Score=62.63  Aligned_cols=209  Identities=11%  Similarity=0.088  Sum_probs=123.0

Q ss_pred             CCCcEEEEEcCCCceeEEEecCCCc-------------------------------------E-EEEEEecCCCEEEEEE
Q psy7108          69 WDKTVKLWNAVETDTQHETIQLLSD-------------------------------------A-LCVAYKPDGTEIVVAT  110 (703)
Q Consensus        69 ~Dg~V~iWd~~~~~~~~~~~~~~~~-------------------------------------V-~~v~~spdg~~las~s  110 (703)
                      .+|.|+.+|..+++...+.......                                     + ..+++.++...++.++
T Consensus       180 ~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~  259 (599)
T 1w6s_A          180 VRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGT  259 (599)
T ss_dssp             CCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEEC
T ss_pred             CCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeC
Confidence            3789999999999776555432111                                     1 1356677777888776


Q ss_pred             CC----------------CeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEc-CCC---CEEEE
Q psy7108         111 LD----------------GQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYS-ADG---SCILA  170 (703)
Q Consensus       111 ~d----------------g~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~s-pdg---~~l~s  170 (703)
                      .+                +.|..+|.++|+.+-.++....-        .+  .......++. +... .+|   +.++.
T Consensus       260 g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d--------~w--d~d~~~~p~l-~d~~~~~G~~~~~v~~  328 (599)
T 1w6s_A          260 GNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHD--------EW--DYAGVNVMML-SEQKDKDGKARKLLTH  328 (599)
T ss_dssp             CCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTC--------SS--CCCCCCCCEE-EEEECTTSCEEEEEEE
T ss_pred             CCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCc--------cc--cccCCCccEE-EeccccCCcEEEEEEE
Confidence            55                37999999999998776653210        00  0000011222 2222 567   46777


Q ss_pred             EecCCcEEEEECCCCceEEEEEeccCCc----c---cc-------------cc-----------ccceeeeeccCCCEEE
Q psy7108         171 AGQSKYICIYSSREGILLKKFTITQNKS----L---DG-------------IN-----------DFINRRKMTEFGNVSL  219 (703)
Q Consensus       171 ~s~dg~I~lwD~~~~~~~~~~~~~~~~~----~---~~-------------~~-----------~~v~~~~~spdg~~l~  219 (703)
                      ++.+|.+.++|.++|+.+..........    +   .+             ..           ..-..++++|+...++
T Consensus       329 ~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~y  408 (599)
T 1w6s_A          329 PDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFF  408 (599)
T ss_dssp             ECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEE
T ss_pred             ECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEE
Confidence            8899999999999999887665321000    0   00             00           0113467777777665


Q ss_pred             EEccc--------------CC-------------CC------CeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEE
Q psy7108         220 IETRE--------------TH-------------EG------GNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAW  266 (703)
Q Consensus       220 ~~~~~--------------~~-------------~~------~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l  266 (703)
                      +...+              +.             .+      ....+.-||+.+++.+-+.... .+..+-...-.+..+
T Consensus       409 v~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagg~v  487 (599)
T 1w6s_A          409 MGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMER-FAVWGGTMATAGDLV  487 (599)
T ss_dssp             EEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEE
T ss_pred             EeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCC-CCccCcceEecCCEE
Confidence            54211              00             00      1247888899888766554311 111111122346677


Q ss_pred             EEEeCCC-EEEEEcCCCceeccee
Q psy7108         267 VAATTEG-VHIYSLDSGYVFDPFL  289 (703)
Q Consensus       267 ~s~s~Dg-v~iwd~~~~~~~~~~~  289 (703)
                      +.++.|+ ++.||.++|+.+-.+.
T Consensus       488 f~gt~dg~l~A~D~~tG~~lW~~~  511 (599)
T 1w6s_A          488 FYGTLDGYLKARDSDTGDLLWKFK  511 (599)
T ss_dssp             EEECTTSEEEEEETTTCCEEEEEE
T ss_pred             EEECCCCeEEEEECCCCCEEEEee
Confidence            7789999 9999999998865543

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=96.98  E-value=0.14  Score=59.39  Aligned_cols=201  Identities=10%  Similarity=0.046  Sum_probs=124.1

Q ss_pred             CcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEE----ecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCC
Q psy7108          47 EGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHET----IQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVES  122 (703)
Q Consensus        47 ~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~----~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~  122 (703)
                      ...|.++...+  +|.+. .|+.++-+..++..++. ....    ......|.++...++|...+ |+.++-+..+|..+
T Consensus       362 ~~~v~~i~~d~--~g~lW-igt~~~Gl~~~~~~~~~-~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~  436 (781)
T 3v9f_A          362 NKVVSSVCDDG--QGKLW-IGTDGGGINVFENGKRV-AIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRL  436 (781)
T ss_dssp             SSCEEEEEECT--TSCEE-EEEBSSCEEEEETTEEE-EECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSS
T ss_pred             CcceEEEEEcC--CCCEE-EEeCCCcEEEEECCCCe-EEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCC
Confidence            35699999887  66644 55555668888875432 1111    11345789998888887544 66667799999877


Q ss_pred             CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccc
Q psy7108         123 AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGI  202 (703)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~  202 (703)
                      ++... +...                 ......|.++...++|...+ |+. +-+..||..+++........ ..  ...
T Consensus       437 ~~~~~-~~~~-----------------~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~-~~--~~~  493 (781)
T 3v9f_A          437 KKFQI-IELE-----------------KNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVIHHYDTS-NS--QLL  493 (781)
T ss_dssp             CEEEE-CCST-----------------TTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSCCEEECTT-TS--SCS
T ss_pred             CcEEE-eccC-----------------CCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEEecccCc-cc--ccc
Confidence            65432 2110                 01123789999888886544 444 55899998876543322111 10  111


Q ss_pred             cccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC---CccceEEEEEcCCCCEEEEEeCCCE-EEEE
Q psy7108         203 NDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK---PEVRVFCVKFSPTGQAWVAATTEGV-HIYS  278 (703)
Q Consensus       203 ~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~---h~~~V~~l~~spdg~~l~s~s~Dgv-~iwd  278 (703)
                      ...|.++...++|...+.+...|       +..+|..+++.......   ....|.++...++|+..++.. +|+ ..|+
T Consensus       494 ~~~i~~i~~d~~g~lWigt~~~G-------l~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d  565 (781)
T 3v9f_A          494 ENFVRSIAQDSEGRFWIGTFGGG-------VGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG-EGLVCFPS  565 (781)
T ss_dssp             CSCEEEEEECTTCCEEEEESSSC-------EEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEET-TEEEEESC
T ss_pred             cceeEEEEEcCCCCEEEEEcCCC-------EEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC-CCceEEEC
Confidence            24688888888888665544332       66677765543221111   245689999999998665544 776 8888


Q ss_pred             cCCCc
Q psy7108         279 LDSGY  283 (703)
Q Consensus       279 ~~~~~  283 (703)
                      ..+++
T Consensus       566 ~~~~~  570 (781)
T 3v9f_A          566 ARNFD  570 (781)
T ss_dssp             TTTCC
T ss_pred             CCCCc
Confidence            77654

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=96.95  E-value=0.076  Score=54.48  Aligned_cols=196  Identities=11%  Similarity=0.178  Sum_probs=113.3

Q ss_pred             CCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecC----CCE--EEEE-EC---CCeEEEEEcC--CCcEEEE
Q psy7108          61 STGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPD----GTE--IVVA-TL---DGQLIMFDVE--SAAQVGS  128 (703)
Q Consensus        61 g~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spd----g~~--las~-s~---dg~I~vwd~~--~~~~~~~  128 (703)
                      ..+++.....+-+.++|+ +++.+..+ .. +.++.+...|+    |+.  ++.+ ..   +++|.+|+++  +++ +..
T Consensus        40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~-~~-g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~  115 (355)
T 3amr_A           40 NSKLITTNKKSGLVVYSL-DGKMLHSY-NT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQS  115 (355)
T ss_dssp             GCEEEEEETTTEEEEEET-TSCEEEEE-CC-SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEE
T ss_pred             ccEEEEEcCCCCEEEEcC-CCcEEEEc-cC-CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eee
Confidence            456666677788999999 66555443 22 56777777663    322  3333 33   4789999774  333 333


Q ss_pred             EeccccCCCCCCCCccchhhcccCCccEEEEEE--cCC-CC-EEEEEecCCcEEEEECC-------CCceEEEEEeccCC
Q psy7108         129 VEARRDLDSGRLDTDLVTREQSLKAKAVSTVCY--SAD-GS-CILAAGQSKYICIYSSR-------EGILLKKFTITQNK  197 (703)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~--spd-g~-~l~s~s~dg~I~lwD~~-------~~~~~~~~~~~~~~  197 (703)
                      +..... .            ....-..+..+|+  +|. ++ ++++...+|.+..|++.       +.+.+++|...   
T Consensus       116 i~~~~~-p------------v~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg---  179 (355)
T 3amr_A          116 MTDPDH-P------------IATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN---  179 (355)
T ss_dssp             CSCTTS-C------------EECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS---
T ss_pred             cccccc-C------------cCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC---
Confidence            321000 0            0000024566777  774 44 57778888999999883       23556666542   


Q ss_pred             ccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC-----CCccceeec-C-CccceEEEEE--cCCCC-EEE
Q psy7108         198 SLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK-----KGDMAARVL-K-PEVRVFCVKF--SPTGQ-AWV  267 (703)
Q Consensus       198 ~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~-----~~~~~~~~~-~-h~~~V~~l~~--spdg~-~l~  267 (703)
                            ..+..+...+....++++-.+      .-|..+|.+     +++.+.... + ....+..+++  .++++ +|+
T Consensus       180 ------sq~EgcvvDd~~g~Lyv~eEd------~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLi  247 (355)
T 3amr_A          180 ------SQTEGMAADDEYGRLYIAEED------EAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLM  247 (355)
T ss_dssp             ------SCEEEEEEETTTTEEEEEETT------TEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEE
T ss_pred             ------CCcceEEEcCCCCeEEEeccc------ceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEE
Confidence                  256678888887777776543      135555543     223333332 2 2246888888  56666 666


Q ss_pred             EEeC-CC-EEEEEcC-CCceecce
Q psy7108         268 AATT-EG-VHIYSLD-SGYVFDPF  288 (703)
Q Consensus       268 s~s~-Dg-v~iwd~~-~~~~~~~~  288 (703)
                      +++. +. ..+|+.+ +.+.+..+
T Consensus       248 vSsQG~~s~~Vydr~~~~~~vg~f  271 (355)
T 3amr_A          248 ASSQGNSSYAIYDRQGKNKYVADF  271 (355)
T ss_dssp             EEEGGGTEEEEEESSTTCCEEEEE
T ss_pred             EEcCCCCEEEEEECCCCCcEEEEE
Confidence            6663 34 8999996 44444333

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=96.93  E-value=0.041  Score=61.35  Aligned_cols=199  Identities=11%  Similarity=0.020  Sum_probs=113.7

Q ss_pred             EEEEcCCCCCCEEEEEeCC----------------CcEEEEEcCCCceeEEEecCC---------CcEEEEEEecCCC--
Q psy7108          52 CIEFSPVLSSTGMVSASWD----------------KTVKLWNAVETDTQHETIQLL---------SDALCVAYKPDGT--  104 (703)
Q Consensus        52 ~l~~sp~~dg~~L~sgs~D----------------g~V~iWd~~~~~~~~~~~~~~---------~~V~~v~~spdg~--  104 (703)
                      .+++.+  +...++.++.+                +.|..+|..+++.........         ....-+...++|+  
T Consensus       239 ~~a~d~--~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~  316 (571)
T 2ad6_A          239 WYAYDP--KLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMT  316 (571)
T ss_dssp             CCEEET--TTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEE
T ss_pred             eEEEcC--CCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEE
Confidence            356777  66667666532                258999999987665554321         1111223335774  


Q ss_pred             -EEEEEECCCeEEEEEcCCCcEEEEEeccccC--------CCCCCCC-----------ccchhhcccCCccEEEEEEcCC
Q psy7108         105 -EIVVATLDGQLIMFDVESAAQVGSVEARRDL--------DSGRLDT-----------DLVTREQSLKAKAVSTVCYSAD  164 (703)
Q Consensus       105 -~las~s~dg~I~vwd~~~~~~~~~~~~~~~~--------~~~~~~~-----------~~~~~~~~~~~~~V~~i~~spd  164 (703)
                       .++.++.+|.++++|..+|+.+...+.....        ..++...           .....+.......-..++++|+
T Consensus       317 ~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~  396 (571)
T 2ad6_A          317 PLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPE  396 (571)
T ss_dssp             EEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETT
T ss_pred             EEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCC
Confidence             5677888999999999999988776543210        0000000           0000000000111134678888


Q ss_pred             CCEEEEEe-------------------------------------cCCcEEEEECCCCceEEEEEeccCCccccccccce
Q psy7108         165 GSCILAAG-------------------------------------QSKYICIYSSREGILLKKFTITQNKSLDGINDFIN  207 (703)
Q Consensus       165 g~~l~s~s-------------------------------------~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~  207 (703)
                      ...+++.+                                     .++.|..||+.+++.+-++....         .+.
T Consensus       397 ~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~---------~~~  467 (571)
T 2ad6_A          397 SRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKF---------AAW  467 (571)
T ss_dssp             TTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESS---------CCC
T ss_pred             CCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCC---------Ccc
Confidence            77776643                                     34789999999998877765322         122


Q ss_pred             eeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccc-eEEEEEcCCCCEEE
Q psy7108         208 RRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVR-VFCVKFSPTGQAWV  267 (703)
Q Consensus       208 ~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~-V~~l~~spdg~~l~  267 (703)
                      +..+...+..+++++.++      .++.+|.++|+.+.++...... -..+.+..+|+.++
T Consensus       468 ~~~~~t~gg~v~~g~~dg------~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv  522 (571)
T 2ad6_A          468 GGTLYTKGGLVWYATLDG------YLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYI  522 (571)
T ss_dssp             SBCEEETTTEEEEECTTS------EEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred             ceeEEECCCEEEEEcCCC------eEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEE
Confidence            223333455666665543      8999999999988776543211 12233556776543

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=96.93  E-value=0.0014  Score=75.21  Aligned_cols=204  Identities=6%  Similarity=-0.055  Sum_probs=111.6

Q ss_pred             cCeEEEEEcCCCCCCEEEEE-eCCCcEEEEEcCCC---ceeEEEec-CCCcEEEEEEecCCCEEEEE-ECCCeEEEEEcC
Q psy7108          48 GPVSCIEFSPVLSSTGMVSA-SWDKTVKLWNAVET---DTQHETIQ-LLSDALCVAYKPDGTEIVVA-TLDGQLIMFDVE  121 (703)
Q Consensus        48 ~~V~~l~~sp~~dg~~L~sg-s~Dg~V~iWd~~~~---~~~~~~~~-~~~~V~~v~~spdg~~las~-s~dg~I~vwd~~  121 (703)
                      ..+.+++|++  .+..|+.+ ...+.|+.+++.+.   .....+.. .......+++.+.+..|+.+ ...+.|.+++++
T Consensus       406 ~~p~gla~d~--~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~d  483 (699)
T 1n7d_A          406 RNVVALDTEV--ASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK  483 (699)
T ss_dssp             TTCCCCEEET--TTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSS
T ss_pred             cceEEEcccc--ccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecC
Confidence            4567889998  66666655 45578988888651   11111111 12234567887655544443 456789999987


Q ss_pred             CCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec--CCcEEEEECCCCceEEEEEeccCCcc
Q psy7108         122 SAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ--SKYICIYSSREGILLKKFTITQNKSL  199 (703)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~--dg~I~lwD~~~~~~~~~~~~~~~~~~  199 (703)
                      .......+....                    .....++++|++..|+.+..  .+.|..+++..... ..+...     
T Consensus       484 g~~~~~l~~~~~--------------------~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~-~~l~~~-----  537 (699)
T 1n7d_A          484 GVKRKTLFREQG--------------------SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSLVTE-----  537 (699)
T ss_dssp             SCCEEEECCCSS--------------------CCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC-CEESCS-----
T ss_pred             CCceEEEEeCCC--------------------CCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe-eEEEeC-----
Confidence            554333322111                    13456889987665555432  26788877754322 222110     


Q ss_pred             ccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC--CccceEEEEEcCCCCEEEEEeC-CC-EE
Q psy7108         200 DGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK--PEVRVFCVKFSPTGQAWVAATT-EG-VH  275 (703)
Q Consensus       200 ~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~--h~~~V~~l~~spdg~~l~s~s~-Dg-v~  275 (703)
                        .....+.++++|++..++++....     ..|..+|+...........  .-....++++..+  .|+.+.. .+ |.
T Consensus       538 --~l~~PnGlavd~~~~~LY~aD~~~-----~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~--~lywtd~~~~~V~  608 (699)
T 1n7d_A          538 --NIQWPNGITLDLLSGRLYWVDSKL-----HSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED--KVFWTDIINEAIF  608 (699)
T ss_dssp             --SCSSCCCEEECTTTCCEEEEETTT-----TEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT--EEEEECSTTTCEE
T ss_pred             --CCCCccEEEEeccCCEEEEEecCC-----CeEEEEccCCCceEEEEecCCcCCCceEeEEECC--EEEEEeCCCCeEE
Confidence              112456799999877666654332     3788888764322222111  1122445565443  5544444 34 88


Q ss_pred             EEEcCCCceecce
Q psy7108         276 IYSLDSGYVFDPF  288 (703)
Q Consensus       276 iwd~~~~~~~~~~  288 (703)
                      .++..+++....+
T Consensus       609 ~~d~~~G~~~~~i  621 (699)
T 1n7d_A          609 SANRLTGSDVNLL  621 (699)
T ss_dssp             EEETTTEEEEECC
T ss_pred             EEEccCCCceEEe
Confidence            9988777665443

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=96.89  E-value=0.044  Score=56.23  Aligned_cols=175  Identities=9%  Similarity=0.163  Sum_probs=109.7

Q ss_pred             CceeeccCCCccccccccCCCcCeEEEEEcCCCCC----C---EEEE-EeC--CCcEEEEEcCC-CceeEEEec------
Q psy7108          27 GVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSS----T---GMVS-ASW--DKTVKLWNAVE-TDTQHETIQ------   89 (703)
Q Consensus        27 ~v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg----~---~L~s-gs~--Dg~V~iWd~~~-~~~~~~~~~------   89 (703)
                      .+.++|.+|+.+  +.+..  +.++.+..-|  +-    .   ++++ .-.  +++|++|++.. ...+.....      
T Consensus        51 gL~Vydl~G~~l--~~~~~--g~~nnVD~r~--~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~  124 (355)
T 3amr_A           51 GLVVYSLDGKML--HSYNT--GKLNNVDIRY--DFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIA  124 (355)
T ss_dssp             EEEEEETTSCEE--EEECC--SCEEEEEEEE--EEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEE
T ss_pred             CEEEEcCCCcEE--EEccC--CCcccEEEec--ccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeeccccccCcC
Confidence            366778899998  77764  6678888777  32    1   2333 333  57899998742 223333311      


Q ss_pred             CC-CcEEEEEE--ecC-CC-EEEEEECCCeEEEEEcC---CC----cEEEEEeccccCCCCCCCCccchhhcccCCccEE
Q psy7108          90 LL-SDALCVAY--KPD-GT-EIVVATLDGQLIMFDVE---SA----AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVS  157 (703)
Q Consensus        90 ~~-~~V~~v~~--spd-g~-~las~s~dg~I~vwd~~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~  157 (703)
                      .. ..+..+|+  +|. ++ ++++...+|.+..|++.   .+    +.++++...                     ..+.
T Consensus       125 t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg---------------------sq~E  183 (355)
T 3amr_A          125 TAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN---------------------SQTE  183 (355)
T ss_dssp             CCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS---------------------SCEE
T ss_pred             CCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC---------------------CCcc
Confidence            11 45677787  674 44 57778889999999882   33    445555442                     2578


Q ss_pred             EEEEcCCCCEEEEEecCCcEEEEECC-----CCceEEEEEeccCCccccccccceeeee--ccCCC-EEEEEcccCCCCC
Q psy7108         158 TVCYSADGSCILAAGQSKYICIYSSR-----EGILLKKFTITQNKSLDGINDFINRRKM--TEFGN-VSLIETRETHEGG  229 (703)
Q Consensus       158 ~i~~spdg~~l~s~s~dg~I~lwD~~-----~~~~~~~~~~~~~~~~~~~~~~v~~~~~--spdg~-~l~~~~~~~~~~~  229 (703)
                      .+...+....|..+-.+.-|..+|.+     +++.+..+.   .   ......+..+++  .++++ ++++++...    
T Consensus       184 gcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~---~---g~l~aDvEGLai~~~~~g~gyLivSsQG~----  253 (355)
T 3amr_A          184 GMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRAD---G---RHLTRDIEGLTIYYAADGKGYLMASSQGN----  253 (355)
T ss_dssp             EEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBS---S---SSBCSCEEEEEEEECGGGCEEEEEEEGGG----
T ss_pred             eEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEec---C---CccccCcceEEEEecCCCCEEEEEEcCCC----
Confidence            89999988899999988778888855     233433321   1   112234666776  56777 566655432    


Q ss_pred             eeEEECCCCC
Q psy7108         230 NVVLKLPGVK  239 (703)
Q Consensus       230 ~~~i~iwd~~  239 (703)
                       .+..+||..
T Consensus       254 -~s~~Vydr~  262 (355)
T 3amr_A          254 -SSYAIYDRQ  262 (355)
T ss_dssp             -TEEEEEESS
T ss_pred             -CEEEEEECC
Confidence             378888875

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=96.89  E-value=0.15  Score=57.40  Aligned_cols=203  Identities=6%  Similarity=-0.065  Sum_probs=115.3

Q ss_pred             CCcCeEEEEEcCCCCCCEEEEEe-CCCcEEEEEcCCCceeEEEec-CCCcEEEEEEecCCCEEEEEE-CCCeEEEEEcCC
Q psy7108          46 HEGPVSCIEFSPVLSSTGMVSAS-WDKTVKLWNAVETDTQHETIQ-LLSDALCVAYKPDGTEIVVAT-LDGQLIMFDVES  122 (703)
Q Consensus        46 H~~~V~~l~~sp~~dg~~L~sgs-~Dg~V~iWd~~~~~~~~~~~~-~~~~V~~v~~spdg~~las~s-~dg~I~vwd~~~  122 (703)
                      .-+...+++|++  .+..|+-+. ..+.|..+++........+.. .-.....+++.+.+..|+.+. ..+.|.+.+++.
T Consensus        38 ~~~~~~~ld~~~--~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG  115 (619)
T 3s94_A           38 GLEDAAAVDFVF--SHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDG  115 (619)
T ss_dssp             CCSCEEEEEEET--TTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred             CCCceEEEEEEe--CCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCC
Confidence            345578999999  666666554 457788888865432223333 235788999999777666554 467899999875


Q ss_pred             CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec--CCcEEEEECCCCceEEEEEeccCCccc
Q psy7108         123 AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ--SKYICIYSSREGILLKKFTITQNKSLD  200 (703)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~--dg~I~lwD~~~~~~~~~~~~~~~~~~~  200 (703)
                      ......+...-                    .....+++.|.+..|..+..  .+.|...++..... ..+....     
T Consensus       116 ~~~~~l~~~~l--------------------~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~-~~l~~~~-----  169 (619)
T 3s94_A          116 SLRKVLFWQEL--------------------DQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR-FIIINSE-----  169 (619)
T ss_dssp             CSCEEEECSSC--------------------SCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EEEECSS-----
T ss_pred             CCEEEEEeCCC--------------------CCCceEEEecCCCeEEEeccCCCCEEEEEECCCCce-EEEEeCC-----
Confidence            54332222111                    13467899997666665542  35677777764332 2222111     


Q ss_pred             cccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCC-C-EEEEE
Q psy7108         201 GINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTE-G-VHIYS  278 (703)
Q Consensus       201 ~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~D-g-v~iwd  278 (703)
                        ....+.++++++++.++++....     ..|...|+..........+.-....++++..+  .++.+... + |...+
T Consensus       170 --~~~P~Glald~~~~~LY~aD~~~-----~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~--~ly~td~~~~~V~~~d  240 (619)
T 3s94_A          170 --IYWPNGLTLDYEEQKLYWADAKL-----NFIHKSNLDGTNRQAVVKGSLPHPFALTLFED--ILYWTDWSTHSILACN  240 (619)
T ss_dssp             --CSSEEEEEEETTTTEEEEEETTT-----CCEEEESSSCCEEC---------CCCEEESSS--EEEEECTTTCSEEEEE
T ss_pred             --CCCCcEEEEEccCCEEEEEeCCC-----CeEEEecCCCCccEEEEeCCCCCceEEEEeCC--EEEEecCCCCEEEEEE
Confidence              12557899999877766654332     36777777543322222211222346677555  55555443 3 88888


Q ss_pred             cCCCcee
Q psy7108         279 LDSGYVF  285 (703)
Q Consensus       279 ~~~~~~~  285 (703)
                      ..+++..
T Consensus       241 ~~tg~~~  247 (619)
T 3s94_A          241 KYTGEGL  247 (619)
T ss_dssp             SSSCCCC
T ss_pred             CCCCccc
Confidence            8777643

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=96.89  E-value=0.045  Score=62.19  Aligned_cols=116  Identities=14%  Similarity=0.180  Sum_probs=71.5

Q ss_pred             EEEEcCCCCCCEEEEEeCCC-----------cEEEEEcCCCcee--EEEec-CCCcEEEEEEecCCCEEEEEEC-CCeEE
Q psy7108          52 CIEFSPVLSSTGMVSASWDK-----------TVKLWNAVETDTQ--HETIQ-LLSDALCVAYKPDGTEIVVATL-DGQLI  116 (703)
Q Consensus        52 ~l~~sp~~dg~~L~sgs~Dg-----------~V~iWd~~~~~~~--~~~~~-~~~~V~~v~~spdg~~las~s~-dg~I~  116 (703)
                      ++++.|. ++++++.|+.++           .+.+||..++.-.  ..... +.....++++.++|+.+++|+. +..+.
T Consensus       190 ~~av~~~-~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~  268 (656)
T 1k3i_A          190 AAAIEPT-SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTS  268 (656)
T ss_dssp             EEEEETT-TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEE
T ss_pred             eEEEEec-CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceE
Confidence            4455552 677888887543           5788998876522  11111 2233445778899999999984 45899


Q ss_pred             EEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe-cC-----CcEEEEECCCCce
Q psy7108         117 MFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG-QS-----KYICIYSSREGIL  187 (703)
Q Consensus       117 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s-~d-----g~I~lwD~~~~~~  187 (703)
                      +||..+.+-...-.    ....               ..-.+++..++|+.++.|+ .+     ..+.+||..+.+.
T Consensus       269 ~yd~~t~~W~~~~~----~~~~---------------R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W  326 (656)
T 1k3i_A          269 LYDSSSDSWIPGPD----MQVA---------------RGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTW  326 (656)
T ss_dssp             EEEGGGTEEEECCC----CSSC---------------CSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEE
T ss_pred             EecCcCCceeECCC----CCcc---------------ccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcc
Confidence            99998765332111    0000               0113455567888888887 34     4688999887654

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=96.81  E-value=0.037  Score=61.89  Aligned_cols=210  Identities=13%  Similarity=0.095  Sum_probs=122.6

Q ss_pred             CCEEEEEeC-CCcEEEEEc-CCCceeEEEecCCC-----------cEEEEEEecCCCE----EEEEECCCeEEEEEcCCC
Q psy7108          61 STGMVSASW-DKTVKLWNA-VETDTQHETIQLLS-----------DALCVAYKPDGTE----IVVATLDGQLIMFDVESA  123 (703)
Q Consensus        61 g~~L~sgs~-Dg~V~iWd~-~~~~~~~~~~~~~~-----------~V~~v~~spdg~~----las~s~dg~I~vwd~~~~  123 (703)
                      +..++.++. ++.|..+|. .+++...+......           ....++++|.+..    +++++.|+.|.-+|..+|
T Consensus        62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG  141 (599)
T 1w6s_A           62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG  141 (599)
T ss_dssp             TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred             CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence            456777777 889999999 88876655432211           0123556554444    888889999999999999


Q ss_pred             cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe------cCCcEEEEECCCCceEEEEEeccCC
Q psy7108         124 AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG------QSKYICIYSSREGILLKKFTITQNK  197 (703)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s------~dg~I~lwD~~~~~~~~~~~~~~~~  197 (703)
                      +.+-.......-           ........++  +   .++ .+++++      .++.|+.+|.++|+.+-++......
T Consensus       142 ~~~W~~~~~~~~-----------~~~~~~ssP~--v---~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~  204 (599)
T 1w6s_A          142 ETVWKVENSDIK-----------VGSTLTIAPY--V---VKD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPD  204 (599)
T ss_dssp             CEEEEEECCCGG-----------GTCBCCSCCE--E---ETT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCH
T ss_pred             CEEEeecCCCCC-----------ccceeecCCE--E---ECC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCc
Confidence            988665432200           0000000111  1   134 455544      3789999999999998777643221


Q ss_pred             c---c---------------------c------cccccceeeeeccCCCEEEEEcccCC----------CCCeeEEECCC
Q psy7108         198 S---L---------------------D------GINDFINRRKMTEFGNVSLIETRETH----------EGGNVVLKLPG  237 (703)
Q Consensus       198 ~---~---------------------~------~~~~~v~~~~~spdg~~l~~~~~~~~----------~~~~~~i~iwd  237 (703)
                      .   +                     .      +-...-...++.++...+++++.+..          ..-...|.-+|
T Consensus       205 ~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald  284 (599)
T 1w6s_A          205 KDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRD  284 (599)
T ss_dssp             HHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEE
T ss_pred             cccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEe
Confidence            0   0                     0      00000013456667777777665420          00013688889


Q ss_pred             CCCCccceeecC--Ccc-------ceEEEEEc-CCC---CEEEEEeCCC-EEEEEcCCCceecc
Q psy7108         238 VKKGDMAARVLK--PEV-------RVFCVKFS-PTG---QAWVAATTEG-VHIYSLDSGYVFDP  287 (703)
Q Consensus       238 ~~~~~~~~~~~~--h~~-------~V~~l~~s-pdg---~~l~s~s~Dg-v~iwd~~~~~~~~~  287 (703)
                      .++|+.+-.+..  |+.       ...-+... .+|   ..++.++.+| +.++|..+|+.+-.
T Consensus       285 ~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~  348 (599)
T 1w6s_A          285 ADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSA  348 (599)
T ss_dssp             TTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEE
T ss_pred             CCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeec
Confidence            999987655443  211       11112222 567   4567788899 99999999987543

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=96.71  E-value=0.053  Score=55.12  Aligned_cols=169  Identities=6%  Similarity=0.032  Sum_probs=103.7

Q ss_pred             cEEEEEEecCCCEEEEEE-CCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEE---cCCCCEE
Q psy7108          93 DALCVAYKPDGTEIVVAT-LDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCY---SADGSCI  168 (703)
Q Consensus        93 ~V~~v~~spdg~~las~s-~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~---spdg~~l  168 (703)
                      ...+++|.+....+..++ ..++|..||...+..... .-. .+...           ......+..+.|   .|+++++
T Consensus        14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~-~~s~~-----------g~~~~~~sGl~~~~~D~~grL~   80 (334)
T 2p9w_A           14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VID-GASSN-----------GDGEQQMSGLSLLTHDNSKRLF   80 (334)
T ss_dssp             CCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCT-TTCCS-----------SCCSEEEEEEEESSSSSCCEEE
T ss_pred             CCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecC-Ccccc-----------CCCcceeeEEEEeccCCCCcEE
Confidence            445789988666666666 689999999976644333 111 00000           000114578999   6887777


Q ss_pred             EEEe-------------cCCcEEEEECC---CCceEEEEEeccCCc----ccc-ccccceeeeeccCCCEEEEEccc-CC
Q psy7108         169 LAAG-------------QSKYICIYSSR---EGILLKKFTITQNKS----LDG-INDFINRRKMTEFGNVSLIETRE-TH  226 (703)
Q Consensus       169 ~s~s-------------~dg~I~lwD~~---~~~~~~~~~~~~~~~----~~~-~~~~v~~~~~spdg~~l~~~~~~-~~  226 (703)
                      ++..             .+..+..||+.   +++.+..........    ..+ .....+.++..++|+.+++.+.. + 
T Consensus        81 vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~-  159 (334)
T 2p9w_A           81 AVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMP-  159 (334)
T ss_dssp             EEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSC-
T ss_pred             EEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCC-
Confidence            7543             25779999999   787766654321100    000 11247889999999988876654 3 


Q ss_pred             CCCeeEEECCCCCCCccceeec------CCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCC
Q psy7108         227 EGGNVVLKLPGVKKGDMAARVL------KPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDS  281 (703)
Q Consensus       227 ~~~~~~i~iwd~~~~~~~~~~~------~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~  281 (703)
                           .|...+.... ......      ......+.++++|+|+.|++....+ +..+|+.+
T Consensus       160 -----~I~rV~pdG~-~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~  215 (334)
T 2p9w_A          160 -----AIARVSADGK-TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK  215 (334)
T ss_dssp             -----EEEEECTTSC-CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred             -----eEEEEeCCCC-EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence                 3444444322 111111      1122367899999999998887777 99999873

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=96.70  E-value=0.56  Score=52.67  Aligned_cols=199  Identities=8%  Similarity=-0.085  Sum_probs=120.6

Q ss_pred             CcCeEEEEEcCCCCCCEEE-EEeCCCcEEEEEcCCCceeEEEec-CCCcEEEEEEecCCCEEEEEE-CCCeEEEEEcCCC
Q psy7108          47 EGPVSCIEFSPVLSSTGMV-SASWDKTVKLWNAVETDTQHETIQ-LLSDALCVAYKPDGTEIVVAT-LDGQLIMFDVESA  123 (703)
Q Consensus        47 ~~~V~~l~~sp~~dg~~L~-sgs~Dg~V~iWd~~~~~~~~~~~~-~~~~V~~v~~spdg~~las~s-~dg~I~vwd~~~~  123 (703)
                      -....+++|++  .+..|+ +-..++.|+.+++.... ...+.. .......+++.+.+..|+.+. ..+.|.+.+++..
T Consensus        36 ~~~~~~l~~d~--~~~~lywtD~~~~~I~r~~~~g~~-~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~  112 (628)
T 4a0p_A           36 VKEASALDFDV--TDNRIYWTDISLKTISRAFMNGSA-LEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQ  112 (628)
T ss_dssp             CSCEEEEEEET--TTTEEEEEETTTTEEEEEETTSCS-CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTST
T ss_pred             CCceEEEEEEC--CCCEEEEEECCCCeEEEEECCCCC-cEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCC
Confidence            34678999999  555554 55567889888886543 233333 224577899988777665554 4678999998755


Q ss_pred             cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec--CCcEEEEECCCCceEEEEEeccCCcccc
Q psy7108         124 AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ--SKYICIYSSREGILLKKFTITQNKSLDG  201 (703)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~--dg~I~lwD~~~~~~~~~~~~~~~~~~~~  201 (703)
                      .....+...-                    .....++++|....|..+..  .+.|...++..........  .      
T Consensus       113 ~~~~l~~~~l--------------------~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~--~------  164 (628)
T 4a0p_A          113 HRQVLVWKDL--------------------DSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVP--N------  164 (628)
T ss_dssp             TCEEEECSSC--------------------CCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC--S------
T ss_pred             cEEEEEeCCC--------------------CCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEEC--C------
Confidence            4322221111                    14689999996556665542  4678888877544332221  1      


Q ss_pred             ccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeC-CC-EEEEEc
Q psy7108         202 INDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATT-EG-VHIYSL  279 (703)
Q Consensus       202 ~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~-Dg-v~iwd~  279 (703)
                       ....+.++++++++.++++....     ..|...|+..... ..+...-....++++..  ..++.+.. .+ |...+.
T Consensus       165 -~~~P~GlalD~~~~~LY~aD~~~-----~~I~~~d~dG~~~-~v~~~~l~~P~glav~~--~~ly~tD~~~~~I~~~dk  235 (628)
T 4a0p_A          165 -VGRANGLTIDYAKRRLYWTDLDT-----NLIESSNMLGLNR-EVIADDLPHPFGLTQYQ--DYIYWTDWSRRSIERANK  235 (628)
T ss_dssp             -CSSEEEEEEETTTTEEEEEETTT-----TEEEEEETTSCSC-EEEEECCSCEEEEEEET--TEEEEEETTTTEEEEEET
T ss_pred             -CCCcceEEEccccCEEEEEECCC-----CEEEEEcCCCCce-EEeeccCCCceEEEEEC--CEEEEecCCCCEEEEEEC
Confidence             12567899999877776655432     3677777654432 22322233455777764  35555544 44 888887


Q ss_pred             CCCcee
Q psy7108         280 DSGYVF  285 (703)
Q Consensus       280 ~~~~~~  285 (703)
                      .+++..
T Consensus       236 ~tg~~~  241 (628)
T 4a0p_A          236 TSGQNR  241 (628)
T ss_dssp             TTCCSC
T ss_pred             CCCCce
Confidence            777543

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=96.67  E-value=0.28  Score=50.05  Aligned_cols=165  Identities=6%  Similarity=-0.078  Sum_probs=95.8

Q ss_pred             cCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEEC--CCeEEEEEcCCCcE
Q psy7108          48 GPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATL--DGQLIMFDVESAAQ  125 (703)
Q Consensus        48 ~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~--dg~I~vwd~~~~~~  125 (703)
                      ....++++.+. ++.++++-...+.|.+.+++.................+++.|.+..|+.+..  .+.|...+++....
T Consensus        79 ~~p~glavd~~-~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~  157 (318)
T 3sov_A           79 LSPDGLACDWL-GEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR  157 (318)
T ss_dssp             SCCCEEEEETT-TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC
T ss_pred             CCccEEEEEcC-CCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe
Confidence            34567888872 3445555556678999998654322222234456789999998777766653  57888888764332


Q ss_pred             EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe-cCCcEEEEECCCCceEEEEEeccCCccccccc
Q psy7108         126 VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG-QSKYICIYSSREGILLKKFTITQNKSLDGIND  204 (703)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s-~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~  204 (703)
                      .......-                    .....++++|++..|..+. ..+.|..+|+..... +.+....       ..
T Consensus       158 ~~~~~~~l--------------------~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~-~~~~~~~-------~~  209 (318)
T 3sov_A          158 FIIINSEI--------------------YWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNR-QAVVKGS-------LP  209 (318)
T ss_dssp             EEEECSSC--------------------SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSC-------CS
T ss_pred             EEEEECCC--------------------CCccEEEEeccCCEEEEEECCCCEEEEEcCCCCce-EEEecCC-------CC
Confidence            22222111                    1467899999777776664 457899999875332 2222101       11


Q ss_pred             cceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeec
Q psy7108         205 FINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL  248 (703)
Q Consensus       205 ~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~  248 (703)
                      ....+++.  +..++++....     ..|..++..+|+....+.
T Consensus       210 ~P~glav~--~~~lywtd~~~-----~~V~~~~~~~G~~~~~i~  246 (318)
T 3sov_A          210 HPFALTLF--EDILYWTDWST-----HSILACNKYTGEGLREIH  246 (318)
T ss_dssp             CEEEEEEE--TTEEEEEETTT-----TEEEEEETTTCCSCEEEE
T ss_pred             CceEEEEe--CCEEEEEecCC-----CeEEEEECCCCCceEEEe
Confidence            33455654  33444443221     367777776666554443

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=96.66  E-value=0.39  Score=51.94  Aligned_cols=134  Identities=13%  Similarity=0.096  Sum_probs=74.7

Q ss_pred             ceeeccCCCccccccccC----CCcCeEEEEE-------cCCCCCCEEEEEeCCC-------cEEEEEcCCCceeE----
Q psy7108          28 VKKGDMAARVLKPEVLSG----HEGPVSCIEF-------SPVLSSTGMVSASWDK-------TVKLWNAVETDTQH----   85 (703)
Q Consensus        28 v~~~d~tg~~~~~~~l~g----H~~~V~~l~~-------sp~~dg~~L~sgs~Dg-------~V~iWd~~~~~~~~----   85 (703)
                      ++..|..++.+  .++..    .......++|       ++  +++.|+.+...+       .|.+.+........    
T Consensus       164 i~~ID~~~~~v--~~l~~~~~~~~~~p~~ia~~~~~~~~d~--~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~  239 (496)
T 3kya_A          164 IQLIDLKNRML--SSPLNINTIPTNRIRSIAFNKKIEGYAD--EAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSD  239 (496)
T ss_dssp             EEEEETTTTEE--EEEECCTTSSCSBEEEEEECCCBTTTBC--TTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSC
T ss_pred             EEEEECCCCEE--EEEEccCccccCCCcEEEEeecccccCC--CCCEEEEEeCCCCCcccCceEEEEecCCCCceeeccc
Confidence            44556555444  33322    1235899999       99  898666665443       25555533311111    


Q ss_pred             -EEecCCCcEEEEEEecCCCEE-EEEECCCeEEEEEcC-------CCcE-----------EEEEeccccCCCCCCCCccc
Q psy7108          86 -ETIQLLSDALCVAYKPDGTEI-VVATLDGQLIMFDVE-------SAAQ-----------VGSVEARRDLDSGRLDTDLV  145 (703)
Q Consensus        86 -~~~~~~~~V~~v~~spdg~~l-as~s~dg~I~vwd~~-------~~~~-----------~~~~~~~~~~~~~~~~~~~~  145 (703)
                       .....-.....++++|++..| ++-..++.|..+|++       ++..           ...+-...            
T Consensus       240 ~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~------------  307 (496)
T 3kya_A          240 IQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIA------------  307 (496)
T ss_dssp             EEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECS------------
T ss_pred             ceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecC------------
Confidence             111111234577889955544 455567789999987       4543           11111000            


Q ss_pred             hhhcccCCccEEEEEEcCCCCEEEEE-ecCCcEEEEECC
Q psy7108         146 TREQSLKAKAVSTVCYSADGSCILAA-GQSKYICIYSSR  183 (703)
Q Consensus       146 ~~~~~~~~~~V~~i~~spdg~~l~s~-s~dg~I~lwD~~  183 (703)
                            .......++|+|+|+.|..+ +....|+.+|..
T Consensus       308 ------~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d  340 (496)
T 3kya_A          308 ------DPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD  340 (496)
T ss_dssp             ------SSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred             ------CCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence                  01234789999999965554 456778886653

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=96.63  E-value=0.13  Score=53.18  Aligned_cols=187  Identities=14%  Similarity=0.159  Sum_probs=108.7

Q ss_pred             CeEEEEEcCCCCCCEEEEEe------------CCCcEEEEEcCCCc-ee--EEEec-----CCCcEEEEEEec--CCC-E
Q psy7108          49 PVSCIEFSPVLSSTGMVSAS------------WDKTVKLWNAVETD-TQ--HETIQ-----LLSDALCVAYKP--DGT-E  105 (703)
Q Consensus        49 ~V~~l~~sp~~dg~~L~sgs------------~Dg~V~iWd~~~~~-~~--~~~~~-----~~~~V~~v~~sp--dg~-~  105 (703)
                      ..-.+...|  +|..+++++            .+|.|.++|..+.. ..  .....     ..-....+.+.+  +|. +
T Consensus        51 G~EDi~~~~--~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~  128 (355)
T 3sre_A           51 GSEDLEILP--NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVY  128 (355)
T ss_dssp             CCCEEEECT--TSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEE
T ss_pred             CcceeEEcC--CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEE
Confidence            345667788  776666652            68999999987432 12  12222     123567787766  454 4


Q ss_pred             EEEEEC---CCeEEEEEcCCC-cEE---EEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe------
Q psy7108         106 IVVATL---DGQLIMFDVESA-AQV---GSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG------  172 (703)
Q Consensus       106 las~s~---dg~I~vwd~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s------  172 (703)
                      |+++..   +.+|.+|+++.. ...   ..+.+..                   -...+.+++.++|.+.++..      
T Consensus       129 L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~-------------------~~~pND~~v~~~G~fyvt~~~~ftd~  189 (355)
T 3sre_A          129 LLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKL-------------------LPSVNDIVAVGPEHFYATNDHYFIDP  189 (355)
T ss_dssp             EEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTT-------------------CSSEEEEEEEETTEEEEEESCSCSSH
T ss_pred             EEEEECCCCCCeEEEEEEECCCCEEEEEeccccCC-------------------CCCCceEEEeCCCCEEecCCcEeCCc
Confidence            544432   456778777543 222   2222211                   22678999999998777643      


Q ss_pred             -----------cCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCC-
Q psy7108         173 -----------QSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKK-  240 (703)
Q Consensus       173 -----------~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~-  240 (703)
                                 ..+.|.-+|.  ++.......         -..-+.++||||++.++++....     ..|..|++.. 
T Consensus       190 ~~~~~e~~~~~~~g~vyr~d~--~~~~~~~~~---------l~~pNGia~spDg~~lYvadt~~-----~~I~~~~~~~~  253 (355)
T 3sre_A          190 YLKSWEMHLGLAWSFVTYYSP--NDVRVVAEG---------FDFANGINISPDGKYVYIAELLA-----HKIHVYEKHAN  253 (355)
T ss_dssp             HHHHHHHHTTCCCEEEEEECT--TCCEEEEEE---------ESSEEEEEECTTSSEEEEEEGGG-----TEEEEEEECTT
T ss_pred             ccccchhhccCCccEEEEEEC--CeEEEeecC---------CcccCcceECCCCCEEEEEeCCC-----CeEEEEEECCC
Confidence                       1244555554  322211111         12457899999999887766543     3788887653 


Q ss_pred             Cccc--eeecCCccceEEEEEcC-CCCEEEEEeCCC
Q psy7108         241 GDMA--ARVLKPEVRVFCVKFSP-TGQAWVAATTEG  273 (703)
Q Consensus       241 ~~~~--~~~~~h~~~V~~l~~sp-dg~~l~s~s~Dg  273 (703)
                      ++..  ..+ ...+....+++.+ +|++.+++..++
T Consensus       254 g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~g  288 (355)
T 3sre_A          254 WTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPNG  288 (355)
T ss_dssp             SCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESCH
T ss_pred             CcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCCc
Confidence            3221  122 2245678899999 599888776665

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=96.31  E-value=0.46  Score=54.80  Aligned_cols=121  Identities=7%  Similarity=-0.111  Sum_probs=79.9

Q ss_pred             CCcCeEEEEEcCCCCCC-EEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEEC--CCeEEEEEcCC
Q psy7108          46 HEGPVSCIEFSPVLSST-GMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATL--DGQLIMFDVES  122 (703)
Q Consensus        46 H~~~V~~l~~sp~~dg~-~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~--dg~I~vwd~~~  122 (703)
                      .......|++.+  .+. ++++-...+.|.+.++............-.....|++.|.+..|+.+..  .+.|.+.+++.
T Consensus       469 ~l~~P~GLAvD~--~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG  546 (791)
T 3m0c_C          469 DIQAPDGLAVDW--IHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG  546 (791)
T ss_dssp             SCSCCCEEEEET--TTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred             CCCCcceeeeee--cCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCC
Confidence            345567899988  554 5555566788999998655432222234456899999998777776653  26788888875


Q ss_pred             CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe-cCCcEEEEECCCCceE
Q psy7108         123 AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG-QSKYICIYSSREGILL  188 (703)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s-~dg~I~lwD~~~~~~~  188 (703)
                      ......+...-                    .....|++++.+..|+.+. ..+.|...|+......
T Consensus       547 ~~~~~lv~~~l--------------------~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~  593 (791)
T 3m0c_C          547 VDIYSLVTENI--------------------QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK  593 (791)
T ss_dssp             CCEEEEECSSC--------------------SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred             CceEEEEeCCC--------------------CCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceE
Confidence            54433332211                    2578899998777777664 4567999998755443

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=96.30  E-value=0.18  Score=54.61  Aligned_cols=157  Identities=10%  Similarity=0.122  Sum_probs=93.2

Q ss_pred             cEEEEEEec-CCCEEEEEEC-CCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEE-------cC
Q psy7108          93 DALCVAYKP-DGTEIVVATL-DGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCY-------SA  163 (703)
Q Consensus        93 ~V~~v~~sp-dg~~las~s~-dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~-------sp  163 (703)
                      ....++|+| ++..|+++.. .+.|++.|+.++...........                 .......++|       ++
T Consensus       140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~-----------------~~~~p~~ia~~~~~~~~d~  202 (496)
T 3kya_A          140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTI-----------------PTNRIRSIAFNKKIEGYAD  202 (496)
T ss_dssp             SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTS-----------------SCSBEEEEEECCCBTTTBC
T ss_pred             CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCcc-----------------ccCCCcEEEEeecccccCC
Confidence            467899998 3555555443 46799999987776554433110                 0125789999       99


Q ss_pred             CCCEEEEEecCC-------cEEEEECCC-CceE-----EEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCe
Q psy7108         164 DGSCILAAGQSK-------YICIYSSRE-GILL-----KKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGN  230 (703)
Q Consensus       164 dg~~l~s~s~dg-------~I~lwD~~~-~~~~-----~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~  230 (703)
                      +|+.|+++...+       .|.+++... +...     ..+..         ......++++|++..++++....     
T Consensus       203 ~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~---------~~~p~giavdp~~g~LYvtd~~~-----  268 (496)
T 3kya_A          203 EAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAA---------YKQCNGATIHPINGELYFNSYEK-----  268 (496)
T ss_dssp             TTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEE---------ESCCCCEEECTTTCCEEEEETTT-----
T ss_pred             CCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeecc---------CCCceEEEEcCCCCeEEEEECCC-----
Confidence            999777665543       266666433 2221     12210         01345688999666655544332     


Q ss_pred             eEEECCCCC-------CCcc-----------cee-ec-CCccceEEEEEcCCCCEEEEEeCCC--EEEEEcC
Q psy7108         231 VVLKLPGVK-------KGDM-----------AAR-VL-KPEVRVFCVKFSPTGQAWVAATTEG--VHIYSLD  280 (703)
Q Consensus       231 ~~i~iwd~~-------~~~~-----------~~~-~~-~h~~~V~~l~~spdg~~l~s~s~Dg--v~iwd~~  280 (703)
                      ..|..+|+.       ++..           ... .. +.......++|+|+|+.|..+....  |+.++.+
T Consensus       269 g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d  340 (496)
T 3kya_A          269 GQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD  340 (496)
T ss_dssp             TEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred             CEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence            368888887       4443           111 11 2234467899999999766665444  7776553

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=96.26  E-value=1.2  Score=46.67  Aligned_cols=192  Identities=13%  Similarity=0.154  Sum_probs=112.4

Q ss_pred             EEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCC-CcEEEEEec
Q psy7108          53 IEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVES-AAQVGSVEA  131 (703)
Q Consensus        53 l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~-~~~~~~~~~  131 (703)
                      .-.+|  ..+.+|--. ..+++|+|+++..+..... ..++|.-=.|-.+. .|+.. .+..|+.|++.. ..+.+.++.
T Consensus        71 AIMnP--~~~iiALra-g~~lQiFnle~K~klks~~-~~e~VvfWkWis~~-~l~lV-T~taVyHWsi~~~s~P~kvFdR  144 (494)
T 1bpo_A           71 AIMNP--ASKVIALKA-GKTLQIFNIEMKSKMKAHT-MTDDVTFWKWISLN-TVALV-TDNAVYHWSMEGESQPVKMFDR  144 (494)
T ss_dssp             EEECS--SSSCEEEEE-TTEEEEEETTTTEEEEEEE-CSSCCCEEEEEETT-EEEEE-CSSEEEEEESSSSCCCEEEEEC
T ss_pred             eeeCC--CCcEEEEec-CCeEEEEchHHhhhhccee-cCCCceEEEecCCC-eEEEE-cCCeeEEecccCCCCchhheec
Confidence            44688  677777665 5799999999986655544 34567666776443 45444 367899999974 467778887


Q ss_pred             cccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe-------cCCcEEEEECCCCceEEEEEecc---------
Q psy7108         132 RRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG-------QSKYICIYSSREGILLKKFTITQ---------  195 (703)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s-------~dg~I~lwD~~~~~~~~~~~~~~---------  195 (703)
                      |..+.                +..|.....+++.++++..+       -.|.+.+|..+.+.. +.+++|.         
T Consensus       145 ~~~L~----------------~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s-Q~ieGhaa~F~~~~~~  207 (494)
T 1bpo_A          145 HSSLA----------------GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS-QPIEGHAASFAQFKME  207 (494)
T ss_dssp             CGGGT----------------TCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCE-EEECCSEEEEEEEECT
T ss_pred             chhcc----------------cceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccccc-chheeeeeeeEEEecC
Confidence            76543                22566666777777766432       125566776654321 0111000         


Q ss_pred             -------------------------------------------CCccccccccceeeeeccCCCEEEEEcccCCCCCeeE
Q psy7108         196 -------------------------------------------NKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVV  232 (703)
Q Consensus       196 -------------------------------------------~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~  232 (703)
                                                                 ....+...+.-.++..|+.-..+++-+..|      .
T Consensus       208 g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G------~  281 (494)
T 1bpo_A          208 GNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYG------Y  281 (494)
T ss_dssp             TCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTS------E
T ss_pred             CCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCc------e
Confidence                                                       011122233444566666666666666554      8


Q ss_pred             EECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC
Q psy7108         233 LKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG  273 (703)
Q Consensus       233 i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg  273 (703)
                      ++++|+.++.++..-.-....|...+-+....-++.....|
T Consensus       282 i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~G  322 (494)
T 1bpo_A          282 IHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKG  322 (494)
T ss_dssp             EEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTC
T ss_pred             EEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCc
Confidence            99999999988765543344443333333333344444444

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=96.23  E-value=0.083  Score=60.00  Aligned_cols=214  Identities=9%  Similarity=-0.005  Sum_probs=113.8

Q ss_pred             CcCeEEEEEcCCCCCCEEEEEeC-CCcEEEEEcCCCceeEEEec--CCCcEEEEEEecCCCEEEEEE-CC-----CeEEE
Q psy7108          47 EGPVSCIEFSPVLSSTGMVSASW-DKTVKLWNAVETDTQHETIQ--LLSDALCVAYKPDGTEIVVAT-LD-----GQLIM  117 (703)
Q Consensus        47 ~~~V~~l~~sp~~dg~~L~sgs~-Dg~V~iWd~~~~~~~~~~~~--~~~~V~~v~~spdg~~las~s-~d-----g~I~v  117 (703)
                      .....++++.+  ++.+++.|+. ++.+.+||..+..- .....  ....-.+++..++|+.++.|+ .+     ..+.+
T Consensus       242 ~~~~~~~~~~~--~g~lyv~GG~~~~~v~~yd~~t~~W-~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~  318 (656)
T 1k3i_A          242 DMFCPGISMDG--NGQIVVTGGNDAKKTSLYDSSSDSW-IPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEV  318 (656)
T ss_dssp             CCSSCEEEECT--TSCEEEECSSSTTCEEEEEGGGTEE-EECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEE
T ss_pred             CCccccccCCC--CCCEEEeCCCCCCceEEecCcCCce-eECCCCCccccccceEEecCCeEEEEeCcccCCcccccceE
Confidence            33445677888  8999999984 45899999876632 11111  111223456667999999988 34     46999


Q ss_pred             EEcCCCcEEEEEecc--ccCCCCCC----------------CCc------------------cchhhccc---------C
Q psy7108         118 FDVESAAQVGSVEAR--RDLDSGRL----------------DTD------------------LVTREQSL---------K  152 (703)
Q Consensus       118 wd~~~~~~~~~~~~~--~~~~~~~~----------------~~~------------------~~~~~~~~---------~  152 (703)
                      ||..+.+-... ...  ......+.                ...                  .+......         .
T Consensus       319 yd~~t~~W~~~-~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~  397 (656)
T 1k3i_A          319 YSPSSKTWTSL-PNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPD  397 (656)
T ss_dssp             EETTTTEEEEE-TTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCC
T ss_pred             eCCCCCcceeC-CCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCC
Confidence            99987754322 100  00000000                000                  00000000         0


Q ss_pred             CccEEEEEEcC-CCCEEEEEecCC-----------cEEEEECCCCceEEEE--EeccCCccccccccceeeeeccCCCEE
Q psy7108         153 AKAVSTVCYSA-DGSCILAAGQSK-----------YICIYSSREGILLKKF--TITQNKSLDGINDFINRRKMTEFGNVS  218 (703)
Q Consensus       153 ~~~V~~i~~sp-dg~~l~s~s~dg-----------~I~lwD~~~~~~~~~~--~~~~~~~~~~~~~~v~~~~~spdg~~l  218 (703)
                      ...-.++.|.. +++.++.|+.++           .|.+||..+.+.....  ..+..       ..-.+.+..|+|+.+
T Consensus       398 ~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~-------R~~~~~~~l~~g~i~  470 (656)
T 1k3i_A          398 AMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFA-------RTFHTSVVLPDGSTF  470 (656)
T ss_dssp             CBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSC-------CBSCEEEECTTSCEE
T ss_pred             CCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCC-------cccCCeEECCCCCEE
Confidence            01123344433 677777777432           6788888876544332  11111       122344667899988


Q ss_pred             EEEcccCCC-----CCeeEEECCCCCCCccc--eeecCCccceEEEEEcCCCCEEEEEeC
Q psy7108         219 LIETRETHE-----GGNVVLKLPGVKKGDMA--ARVLKPEVRVFCVKFSPTGQAWVAATT  271 (703)
Q Consensus       219 ~~~~~~~~~-----~~~~~i~iwd~~~~~~~--~~~~~h~~~V~~l~~spdg~~l~s~s~  271 (703)
                      ++++.+...     .....+.+||..+.+-.  ...........+..+.|||+.++.|+.
T Consensus       471 v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~  530 (656)
T 1k3i_A          471 ITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG  530 (656)
T ss_dssp             EECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred             EECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence            887754211     11246788887765422  111122222334556799999999885

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=96.09  E-value=0.75  Score=46.90  Aligned_cols=193  Identities=10%  Similarity=0.074  Sum_probs=100.5

Q ss_pred             CCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCC-CceeEEE-ecCCCcEEEEEEecCCCEEEEEECCCeEEE-EEcCC
Q psy7108          46 HEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVE-TDTQHET-IQLLSDALCVAYKPDGTEIVVATLDGQLIM-FDVES  122 (703)
Q Consensus        46 H~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~-~~~~~~~-~~~~~~V~~v~~spdg~~las~s~dg~I~v-wd~~~  122 (703)
                      +.+.+.++.+.+  ++..++.+. +|.|  |...+ ++.-... ......+..+++.|++..++++. ++.+.. .|- .
T Consensus       120 ~~~~~~~i~~~~--~~~~~~~~~-~g~v--~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~-~G~~~~S~d~-g  192 (327)
T 2xbg_A          120 LPGSPRLIKALG--NGSAEMITN-VGAI--YRTKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSS-RGSFYSTWEP-G  192 (327)
T ss_dssp             CSSCEEEEEEEE--TTEEEEEET-TCCE--EEESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEET-TSSEEEEECT-T
T ss_pred             CCCCeEEEEEEC--CCCEEEEeC-CccE--EEEcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEEC-CCcEEEEeCC-C
Confidence            345678888877  676666554 5544  32222 3222222 23456789999999988777664 444433 332 1


Q ss_pred             CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccc
Q psy7108         123 AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGI  202 (703)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~  202 (703)
                      ++.-..+...                   ....+..+++.++++.++ ++.+|.+++.+...++.-......   .+ ..
T Consensus       193 G~tW~~~~~~-------------------~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~G~tW~~~~~~---~~-~~  248 (327)
T 2xbg_A          193 QTAWEPHNRT-------------------TSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDNSENWGELLSP---LR-RN  248 (327)
T ss_dssp             CSSCEEEECC-------------------SSSCEEEEEECTTSCEEE-EETTTEEEEEETTEEEEECCCBCT---TS-SC
T ss_pred             CCceeECCCC-------------------CCCccceeEECCCCCEEE-EeCCceEEEecCCCCCeeEeccCC---cc-cC
Confidence            2211111110                   122678899999987654 455677777642223221111110   00 01


Q ss_pred             cccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeec---CCccceEEEEEcCCCCEEEEEeCCC-EEEEE
Q psy7108         203 NDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL---KPEVRVFCVKFSPTGQAWVAATTEG-VHIYS  278 (703)
Q Consensus       203 ~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~---~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd  278 (703)
                      ...+..+.+.+++..++++...       .+ ++....|+.-....   .....+.++.|.++++ +++++.+| +.-++
T Consensus       249 ~~~~~~v~~~~~~~~~~~g~~g-------~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~  319 (327)
T 2xbg_A          249 SVGFLDLAYRTPNEVWLAGGAG-------AL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYV  319 (327)
T ss_dssp             CSCEEEEEESSSSCEEEEESTT-------CE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEEC
T ss_pred             CcceEEEEecCCCEEEEEeCCC-------eE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEc
Confidence            1246778888888776665432       23 12222232222222   2235678888875554 66667788 54443

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=96.07  E-value=1.9  Score=48.42  Aligned_cols=199  Identities=7%  Similarity=-0.047  Sum_probs=115.1

Q ss_pred             cCeEEEEEcCCCCCCEEEEE-eCCCcEEEEEcCCCceeEEEec------CCCcEEEEEEecCCCEEEEE-ECCCeEEEEE
Q psy7108          48 GPVSCIEFSPVLSSTGMVSA-SWDKTVKLWNAVETDTQHETIQ------LLSDALCVAYKPDGTEIVVA-TLDGQLIMFD  119 (703)
Q Consensus        48 ~~V~~l~~sp~~dg~~L~sg-s~Dg~V~iWd~~~~~~~~~~~~------~~~~V~~v~~spdg~~las~-s~dg~I~vwd  119 (703)
                      ..+.+++|.+  ....|+-+ ...+.|+.++.........+..      ....+..+++...++.|..+ +..+.|.+.+
T Consensus       340 ~~~~~ld~d~--~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~  417 (628)
T 4a0p_A          340 RNVRAIDYDP--LDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTR  417 (628)
T ss_dssp             SCEEEEEEET--TTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred             CCceEEEEec--CCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEE
Confidence            4578999998  55555554 4567788888754432222221      23468899999987766544 4567899999


Q ss_pred             cCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC-CCCEEEEEecCC--cEEEEECCCCceEEEEEeccC
Q psy7108         120 VESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA-DGSCILAAGQSK--YICIYSSREGILLKKFTITQN  196 (703)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp-dg~~l~s~s~dg--~I~lwD~~~~~~~~~~~~~~~  196 (703)
                      ++ |+....+....                   ......+++.| .|..+.+-....  .|...++..... ..+.... 
T Consensus       418 ~~-G~~~~~l~~~~-------------------l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~-~~l~~~~-  475 (628)
T 4a0p_A          418 LD-GRSVGVVLKGE-------------------QDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTER-EVLFFSG-  475 (628)
T ss_dssp             TT-SCEEEEEEECT-------------------TCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSC-EEEECSS-
T ss_pred             CC-CCeEEEEEeCC-------------------CCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCc-EEEEecc-
Confidence            86 44444443211                   12578999999 555444432222  577777664332 2222111 


Q ss_pred             CccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeec-CCccceEEEEEcCCCCEEEEEeCCC--
Q psy7108         197 KSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL-KPEVRVFCVKFSPTGQAWVAATTEG--  273 (703)
Q Consensus       197 ~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~-~h~~~V~~l~~spdg~~l~s~s~Dg--  273 (703)
                            ....+.++++++++.++++....     ..|...++... ....+. ..-....+++...  ..+..+....  
T Consensus       476 ------l~~P~gla~D~~~~~LYw~D~~~-----~~I~~~~~dG~-~r~~~~~~~~~~P~glav~~--~~ly~tD~~~~~  541 (628)
T 4a0p_A          476 ------LSKPIALALDSRLGKLFWADSDL-----RRIESSDLSGA-NRIVLEDSNILQPVGLTVFE--NWLYWIDKQQQM  541 (628)
T ss_dssp             ------CSCEEEEEEETTTTEEEEEETTT-----TEEEEEETTSC-SCEEEECSSCSCEEEEEEET--TEEEEEETTTTE
T ss_pred             ------CCCccEEEEeCCCCEEEEEeCCC-----CEEEEEeCCCC-ceEEEEcCCCCCcEEEEEEC--CEEEEEECCCCe
Confidence                  12557899999877766654321     25666666433 233332 2233456777654  3555555443  


Q ss_pred             EEEEEcCCCce
Q psy7108         274 VHIYSLDSGYV  284 (703)
Q Consensus       274 v~iwd~~~~~~  284 (703)
                      |...+..+|+.
T Consensus       542 i~~~~k~~G~~  552 (628)
T 4a0p_A          542 IEKIDMTGREG  552 (628)
T ss_dssp             EEEEETTSSSC
T ss_pred             EEEEECcCCCC
Confidence            77778776654

>3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A*

Probab=95.85  E-value=0.0033  Score=64.01  Aligned_cols=56  Identities=20%  Similarity=0.127  Sum_probs=46.7

Q ss_pred             chHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccccc
Q psy7108         612 DTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFL  667 (703)
Q Consensus       612 d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~  667 (703)
                      ++.+.++.++..++.+++++||||||+.++..++...|...++|+.+|.++|...-
T Consensus       116 ~la~~I~~l~~~~g~~~v~LVGHSmGGlvA~~al~~~p~~~~~V~~lV~lapp~~G  171 (316)
T 3icv_A          116 YMVNAITTLYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKG  171 (316)
T ss_dssp             HHHHHHHHHHHHTTSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTC
T ss_pred             HHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHhccccchhhceEEEECCCCCC
Confidence            46678999999999889999999999999877777656556789999999987543

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=95.78  E-value=1.6  Score=48.80  Aligned_cols=198  Identities=6%  Similarity=-0.092  Sum_probs=111.1

Q ss_pred             cCeEEEEEcCCCCCCEEEEE-eCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEE-ECCCeEEEEEcCCCcE
Q psy7108          48 GPVSCIEFSPVLSSTGMVSA-SWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVA-TLDGQLIMFDVESAAQ  125 (703)
Q Consensus        48 ~~V~~l~~sp~~dg~~L~sg-s~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~-s~dg~I~vwd~~~~~~  125 (703)
                      ..+.+++|.+  .+..|+.+ ...+.|+.+++............-.....+++.+.+..|+.+ +..+.|.+.+++....
T Consensus       349 ~~~~~ld~d~--~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~  426 (619)
T 3s94_A          349 RHAIAIDYDP--VEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMR  426 (619)
T ss_dssp             SSEEEEEEET--TTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred             CccEEEEEEc--CCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeE
Confidence            4567899998  55555544 456788888886543322222233567789998766655555 4467899999875533


Q ss_pred             EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec--CCcEEEEECCCCceEEEEEeccCCcccccc
Q psy7108         126 VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ--SKYICIYSSREGILLKKFTITQNKSLDGIN  203 (703)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~--dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~  203 (703)
                      ...+...                    -.....+++.|....|..+..  ...|...++..... ..+...       ..
T Consensus       427 ~~l~~~~--------------------l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~-~~l~~~-------~l  478 (619)
T 3s94_A          427 KILISED--------------------LEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDR-VVLVNT-------SL  478 (619)
T ss_dssp             EEEECTT--------------------CCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EEEECS-------SC
T ss_pred             EEEEECC--------------------CCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCcc-EEEEeC-------CC
Confidence            2222111                    125789999997545554432  35677777664332 222211       11


Q ss_pred             ccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC--EEEEEcCC
Q psy7108         204 DFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG--VHIYSLDS  281 (703)
Q Consensus       204 ~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg--v~iwd~~~  281 (703)
                      ...+.+++++++..++++....     ..|...++............-....+++...+  .|..+....  |...+..+
T Consensus       479 ~~P~GlalD~~~~~LY~aD~~~-----~~I~~~~~dG~~~~~~~~~~l~~P~glav~~~--~ly~tD~~~~~I~~~~k~~  551 (619)
T 3s94_A          479 GWPNGLALDYDEGKIYWGDAKT-----DKIEVMNTDGTGRRVLVEDKIPHIFGFTLLGD--YVYWTDWQRRSIERVHKRS  551 (619)
T ss_dssp             SCEEEEEEETTTTEEEEEETTT-----TEEEEEESSSCCCEEEEECCCCSSCCEEEETT--EEEEECTTSSCEEEEESSS
T ss_pred             CCCeeeEEcccCCEEEEEECCC-----CEEEEEecCCCceEEEeccCCCCcEEEEEECC--EEEEeecCCCeEEEEEcCC
Confidence            2567899998777666654321     25666666433222111221222345555433  665555444  77777776


Q ss_pred             C
Q psy7108         282 G  282 (703)
Q Consensus       282 ~  282 (703)
                      +
T Consensus       552 g  552 (619)
T 3s94_A          552 A  552 (619)
T ss_dssp             C
T ss_pred             C
Confidence            6

>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}

Probab=95.68  E-value=0.00085  Score=76.68  Aligned_cols=59  Identities=20%  Similarity=0.061  Sum_probs=43.1

Q ss_pred             hcccCCchhhHHHhHccC--CCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhhhcc
Q psy7108         525 ELGLYDTTATIDYILNQT--GHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLG  586 (703)
Q Consensus       525 ~~g~~d~~~~~~~i~~~~--~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~  586 (703)
                      ...+.|+.++++|+.+..  ..++++++|||+||+++..++++.|+   .++..++.+|+..+.
T Consensus       536 ~~~~~D~~aav~~L~~~~~~d~~rI~i~G~S~GG~la~~~a~~~pd---~f~a~V~~~pv~D~~  596 (711)
T 4hvt_A          536 QTAFNDFFAVSEELIKQNITSPEYLGIKGGSNGGLLVSVAMTQRPE---LFGAVACEVPILDMI  596 (711)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGG---GCSEEEEESCCCCTT
T ss_pred             cCcHHHHHHHHHHHHHcCCCCcccEEEEeECHHHHHHHHHHHhCcC---ceEEEEEeCCccchh
Confidence            344568889999999774  34799999999999988776665443   466667777765443

>3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str}

Probab=95.64  E-value=0.0022  Score=66.89  Aligned_cols=56  Identities=14%  Similarity=0.078  Sum_probs=42.1

Q ss_pred             eeeecchHHHHHHHHhhCCCCceE-EEEeChhHHHHHHHhcCCchHHHHHHHhee-ccccc
Q psy7108         607 QVGLYDTTATIDYILNQTGHNSLI-TLGHSLGTTNVLIAGSLRPEYQTKVRLNVL-WAQSA  665 (703)
Q Consensus       607 e~~~~d~pa~i~~i~~~t~~~~~~-~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~-l~p~~  665 (703)
                      .+...|+.+.+..++...+.++++ ++|||+|+++++.++..+|+   +++.+++ +++..
T Consensus       126 ~~~~~~~~~d~~~~l~~l~~~~~~ilvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~  183 (377)
T 3i1i_A          126 VFTFLDVARMQCELIKDMGIARLHAVMGPSAGGMIAQQWAVHYPH---MVERMIGVITNPQ  183 (377)
T ss_dssp             CCCHHHHHHHHHHHHHHTTCCCBSEEEEETHHHHHHHHHHHHCTT---TBSEEEEESCCSB
T ss_pred             CCCHHHHHHHHHHHHHHcCCCcEeeEEeeCHhHHHHHHHHHHChH---HHHHhcccCcCCC
Confidence            334455556677777778888886 99999999999999998886   4667777 55544

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=95.56  E-value=0.036  Score=63.41  Aligned_cols=178  Identities=8%  Similarity=-0.015  Sum_probs=100.2

Q ss_pred             CcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEE-CCCeEEEEEcCCC----cEEEEEeccccCCCCCCCCccc
Q psy7108          71 KTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVAT-LDGQLIMFDVESA----AQVGSVEARRDLDSGRLDTDLV  145 (703)
Q Consensus        71 g~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s-~dg~I~vwd~~~~----~~~~~~~~~~~~~~~~~~~~~~  145 (703)
                      +.|+..++.+.. ...+......+..++|++.+..|+.+. ..+.|+.+++.+.    .....+..              
T Consensus       386 ~~I~~id~~~~~-~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~--------------  450 (699)
T 1n7d_A          386 HEVRKMTLDRSE-YTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR--------------  450 (699)
T ss_dssp             TC-CEECTTSCC-EECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCS--------------
T ss_pred             cceEEEeCCCCc-ceeeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeC--------------
Confidence            567777776553 233333345567899999877776654 3578888888752    11100000              


Q ss_pred             hhhcccCCccEEEEEEcCCCCEEE-EEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEccc
Q psy7108         146 TREQSLKAKAVSTVCYSADGSCIL-AAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRE  224 (703)
Q Consensus       146 ~~~~~~~~~~V~~i~~spdg~~l~-s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~  224 (703)
                            .......+++.+.+..|+ +-...+.|.++++...... .+....       ......++++|.+..++++...
T Consensus       451 ------~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~-~l~~~~-------~~~P~giavDp~~g~ly~td~~  516 (699)
T 1n7d_A          451 ------DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRK-TLFREQ-------GSKPRAIVVDPVHGFMYWTDWG  516 (699)
T ss_dssp             ------CC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEE-EECCCS-------SCCCCCEECCSSSSCCEECCCS
T ss_pred             ------CCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceE-EEEeCC-------CCCcceEEEccCCCcEEEcccC
Confidence                  001234578876544444 4345678999998755433 222111       1134678899977666665432


Q ss_pred             CCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCC-C-EEEEEcCC
Q psy7108         225 THEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTE-G-VHIYSLDS  281 (703)
Q Consensus       225 ~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~D-g-v~iwd~~~  281 (703)
                      .    ...|...++............-.....|+|+|++..|+.+... + |.+++++.
T Consensus       517 ~----~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG  571 (699)
T 1n7d_A          517 T----PAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG  571 (699)
T ss_dssp             S----SCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSS
T ss_pred             C----CCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCC
Confidence            1    1367777765432221111222346789999987777655544 3 88888864

>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens}

Probab=95.53  E-value=0.0046  Score=63.60  Aligned_cols=57  Identities=19%  Similarity=0.239  Sum_probs=47.9

Q ss_pred             cchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccccCCC
Q psy7108         611 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLGNL  670 (703)
Q Consensus       611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~~~~  670 (703)
                      -|+-+.++++....+..+++++|||+|+.+++.++..+|+   +++.+++++|+......
T Consensus       116 ~d~~~~l~~l~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~---~v~~lvl~~~~~~~~~~  172 (342)
T 3hju_A          116 RDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPG---HFAGMVLISPLVLANPE  172 (342)
T ss_dssp             HHHHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTT---TCSEEEEESCCCSCCTT
T ss_pred             HHHHHHHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhCcc---ccceEEEECcccccchh
Confidence            4788899998888777789999999999999999888775   58899999998766543

>3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str}

Probab=95.29  E-value=0.0024  Score=66.55  Aligned_cols=42  Identities=17%  Similarity=0.150  Sum_probs=29.0

Q ss_pred             cCCchhhHHHhHccCCCcceE-EEEEecCceeeeeccCCCchh
Q psy7108         528 LYDTTATIDYILNQTGHNSLI-TLGHSLGTTNVLIAGSLRPEY  569 (703)
Q Consensus       528 ~~d~~~~~~~i~~~~~~~~~~-~~g~S~G~~~~~~~~~~~~~~  569 (703)
                      +.|..+.+..++..-+.+++. ++|||+||..++....+.|+.
T Consensus       129 ~~~~~~d~~~~l~~l~~~~~~ilvGhS~Gg~ia~~~a~~~p~~  171 (377)
T 3i1i_A          129 FLDVARMQCELIKDMGIARLHAVMGPSAGGMIAQQWAVHYPHM  171 (377)
T ss_dssp             HHHHHHHHHHHHHHTTCCCBSEEEEETHHHHHHHHHHHHCTTT
T ss_pred             HHHHHHHHHHHHHHcCCCcEeeEEeeCHhHHHHHHHHHHChHH
Confidence            334445555566555667886 999999999887766666543

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=95.27  E-value=0.29  Score=49.05  Aligned_cols=192  Identities=9%  Similarity=0.056  Sum_probs=95.3

Q ss_pred             CCCEEEEEeCC-----CcEEEEEcCCCce--eEEEec--CCCcEEEEEEecCCCEEEEEECC-----CeEEEEEcCCCcE
Q psy7108          60 SSTGMVSASWD-----KTVKLWNAVETDT--QHETIQ--LLSDALCVAYKPDGTEIVVATLD-----GQLIMFDVESAAQ  125 (703)
Q Consensus        60 dg~~L~sgs~D-----g~V~iWd~~~~~~--~~~~~~--~~~~V~~v~~spdg~~las~s~d-----g~I~vwd~~~~~~  125 (703)
                      ++.+++.|+.+     ..+.+||..+...  -.....  ....-.+++. .+++.++.|+.+     ..+.+||+.+.+-
T Consensus        62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W  140 (301)
T 2vpj_A           62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATT-LGDMIYVSGGFDGSRRHTSMERYDPNIDQW  140 (301)
T ss_dssp             TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEE
T ss_pred             CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEE-ECCEEEEEcccCCCcccceEEEEcCCCCeE
Confidence            56778888755     3588899877640  111111  1111112222 267777777654     3588899887654


Q ss_pred             EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC-----CcEEEEECCCCceEEEEEeccCCccc
Q psy7108         126 VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS-----KYICIYSSREGILLKKFTITQNKSLD  200 (703)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d-----g~I~lwD~~~~~~~~~~~~~~~~~~~  200 (703)
                      ...-....    .              .....++.+  +++.++.|+.+     ..+.+||+.+.+-...-..+..    
T Consensus       141 ~~~~~~p~----~--------------r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~----  196 (301)
T 2vpj_A          141 SMLGDMQT----A--------------REGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATK----  196 (301)
T ss_dssp             EEEEECSS----C--------------CBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSC----
T ss_pred             EECCCCCC----C--------------cccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcc----
Confidence            33211100    0              001122222  56777777654     4589999988754433111111    


Q ss_pred             cccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccce--eecCCccceEEEEEcCCCCEEEEEeCCC-----
Q psy7108         201 GINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAA--RVLKPEVRVFCVKFSPTGQAWVAATTEG-----  273 (703)
Q Consensus       201 ~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~--~~~~h~~~V~~l~~spdg~~l~s~s~Dg-----  273 (703)
                          .....+..-+++.+++++.++ ......+.+||..+.+-..  ...........+.+  +++.++.|+.++     
T Consensus       197 ----r~~~~~~~~~~~i~v~GG~~~-~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~  269 (301)
T 2vpj_A          197 ----RSGAGVALLNDHIYVVGGFDG-TAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNSLLS  269 (301)
T ss_dssp             ----CBSCEEEEETTEEEEECCBCS-SSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBEE
T ss_pred             ----cccceEEEECCEEEEEeCCCC-CcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCEEEEEcCcCCCcccc
Confidence                111112223566666665443 2213467888887653222  11111122222222  566667776542     


Q ss_pred             -EEEEEcCCCc
Q psy7108         274 -VHIYSLDSGY  283 (703)
Q Consensus       274 -v~iwd~~~~~  283 (703)
                       +.+||..+.+
T Consensus       270 ~v~~yd~~~~~  280 (301)
T 2vpj_A          270 SIECYDPIIDS  280 (301)
T ss_dssp             EEEEEETTTTE
T ss_pred             cEEEEcCCCCe
Confidence             5678876654

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=95.27  E-value=0.92  Score=46.84  Aligned_cols=113  Identities=10%  Similarity=0.039  Sum_probs=63.1

Q ss_pred             CCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC---CC
Q psy7108          90 LLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD---GS  166 (703)
Q Consensus        90 ~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd---g~  166 (703)
                      .-.....++|.|||+.+ ++..++.|++++  +++.. .+.... +             ..........++++|+   +.
T Consensus        29 ~l~~P~~ia~~pdG~l~-V~e~~g~I~~i~--~g~~~-~~~~~~-v-------------~~~g~~~p~gia~~pdf~~~g   90 (352)
T 2ism_A           29 GLEVPWALAFLPDGGML-IAERPGRIRLFR--EGRLS-TYAELS-V-------------YHRGESGLLGLALHPRFPQEP   90 (352)
T ss_dssp             CCSCEEEEEECTTSCEE-EEETTTEEEEEE--TTEEE-EEEECC-C-------------CCSTTCSEEEEEECTTTTTSC
T ss_pred             CCCCceEEEEcCCCeEE-EEeCCCeEEEEE--CCCcc-Eeecce-E-------------eecCCCCceeEEECCCCCCCC
Confidence            34457899999999854 556779999998  44422 111110 0             0001235789999998   55


Q ss_pred             EEEEEec-C-----CcEEEEECCCCceE---EEEEeccCCccccccccceeeeeccCCCEEEEEc
Q psy7108         167 CILAAGQ-S-----KYICIYSSREGILL---KKFTITQNKSLDGINDFINRRKMTEFGNVSLIET  222 (703)
Q Consensus       167 ~l~s~s~-d-----g~I~lwD~~~~~~~---~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~  222 (703)
                      .|.++.. .     +.|..++...+...   ..+..-....-..|  ....++|.|||..+++.+
T Consensus        91 ~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h--~~~~l~~~pdG~Lyv~~G  153 (352)
T 2ism_A           91 YVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLH--SGGRIAFGPDGMLYVTTG  153 (352)
T ss_dssp             EEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCC--CCCCEEECTTSCEEEECC
T ss_pred             EEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCc--CCceEEECCCCCEEEEEC
Confidence            5555433 2     56888887754221   11111110000111  346899999997655543

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=95.12  E-value=2.9  Score=42.93  Aligned_cols=70  Identities=13%  Similarity=0.131  Sum_probs=46.1

Q ss_pred             cCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEe------cCCCcEEEEEEecC---CCEEEEEEC-C-----
Q psy7108          48 GPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETI------QLLSDALCVAYKPD---GTEIVVATL-D-----  112 (703)
Q Consensus        48 ~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~------~~~~~V~~v~~spd---g~~las~s~-d-----  112 (703)
                      ..-.+++|.|  +|.++++ ..+|.|++++  ++. ...+.      ........++|+|+   +..|.++.. +     
T Consensus        31 ~~P~~ia~~p--dG~l~V~-e~~g~I~~i~--~g~-~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~  104 (352)
T 2ism_A           31 EVPWALAFLP--DGGMLIA-ERPGRIRLFR--EGR-LSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLR  104 (352)
T ss_dssp             SCEEEEEECT--TSCEEEE-ETTTEEEEEE--TTE-EEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSE
T ss_pred             CCceEEEEcC--CCeEEEE-eCCCeEEEEE--CCC-ccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCc
Confidence            3457999999  9986655 4568898888  332 22111      12456899999998   555555433 2     


Q ss_pred             CeEEEEEcCCC
Q psy7108         113 GQLIMFDVESA  123 (703)
Q Consensus       113 g~I~vwd~~~~  123 (703)
                      +.|..++...+
T Consensus       105 ~~v~r~~~~~~  115 (352)
T 2ism_A          105 NQVVRLRHLGE  115 (352)
T ss_dssp             EEEEEEEECSS
T ss_pred             cEEEEEEeCCC
Confidence            57888887654

>1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A*

Probab=94.97  E-value=0.0095  Score=61.11  Aligned_cols=55  Identities=20%  Similarity=0.157  Sum_probs=45.2

Q ss_pred             cchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccc
Q psy7108         611 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  665 (703)
Q Consensus       611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~  665 (703)
                      .++.+.+++++...+..++++||||||+.++..++...|....+|+.+|+++|..
T Consensus        81 ~~l~~~i~~~~~~~g~~~v~lVGhS~GG~va~~~~~~~~~~~~~v~~lV~l~~~~  135 (317)
T 1tca_A           81 EYMVNAITALYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDY  135 (317)
T ss_dssp             HHHHHHHHHHHHHTTSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCT
T ss_pred             HHHHHHHHHHHHHhCCCCEEEEEEChhhHHHHHHHHHcCccchhhhEEEEECCCC
Confidence            4677889999998888899999999999998877776554446789999999864

>1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A

Probab=94.88  E-value=0.012  Score=63.28  Aligned_cols=56  Identities=14%  Similarity=0.021  Sum_probs=46.6

Q ss_pred             ecchHHHHHHHHhhCC--CCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccccC
Q psy7108         610 LYDTTATIDYILNQTG--HNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLG  668 (703)
Q Consensus       610 ~~d~pa~i~~i~~~t~--~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~~  668 (703)
                      ..|+.++++++.+..+  .+++++||||+|+.+++.++..+|+   +++.+++++|+.-+.
T Consensus       127 ~~dl~~~i~~l~~~~g~~~~~i~lvGhSlGg~vA~~~a~~~p~---~v~~iv~l~pa~p~~  184 (432)
T 1gpl_A          127 GAEVAYLVQVLSTSLNYAPENVHIIGHSLGAHTAGEAGKRLNG---LVGRITGLDPAEPYF  184 (432)
T ss_dssp             HHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHTTTT---CSSEEEEESCBCTTT
T ss_pred             HHHHHHHHHHHHHhcCCCcccEEEEEeCHHHHHHHHHHHhccc---ccceeEEeccccccc
Confidence            3688999999987766  6789999999999999988888763   578889999886543

>3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A*

Probab=94.79  E-value=0.0022  Score=65.34  Aligned_cols=55  Identities=20%  Similarity=0.159  Sum_probs=40.2

Q ss_pred             CCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108         529 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  583 (703)
Q Consensus       529 ~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~  583 (703)
                      .++.+.+++++...+.+++.++||||||..+..++.+.+...++++.++.++|..
T Consensus       115 ~~la~~I~~l~~~~g~~~v~LVGHSmGGlvA~~al~~~p~~~~~V~~lV~lapp~  169 (316)
T 3icv_A          115 EYMVNAITTLYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDY  169 (316)
T ss_dssp             HHHHHHHHHHHHHTTSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCT
T ss_pred             HHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHhccccchhhceEEEECCCC
Confidence            3456678888888887899999999999876544444343346788888887753

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=94.75  E-value=4.4  Score=41.67  Aligned_cols=71  Identities=10%  Similarity=-0.015  Sum_probs=45.8

Q ss_pred             CcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEe------cCCCcEEEEEEecC---CCEEEEEEC----C-
Q psy7108          47 EGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETI------QLLSDALCVAYKPD---GTEIVVATL----D-  112 (703)
Q Consensus        47 ~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~------~~~~~V~~v~~spd---g~~las~s~----d-  112 (703)
                      -..-.+++|.|  +|+++++ ..+|.|++++ .++.  ..+.      ........++++|+   +..|.++..    + 
T Consensus        28 l~~P~~ia~~p--dG~l~V~-e~~g~I~~~d-~~G~--~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~  101 (354)
T 3a9g_A           28 LEVPWSIAPLG--GGRYLVT-ERPGRLVLIS-PSGK--KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGG  101 (354)
T ss_dssp             CSCEEEEEEEE--TTEEEEE-ETTTEEEEEC-SSCE--EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGG
T ss_pred             CCCCeEEEEcC--CCeEEEE-eCCCEEEEEe-CCCc--eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCC
Confidence            34568999999  8885555 5568898887 3443  2221      12356899999998   555554433    3 


Q ss_pred             ---CeEEEEEcCCC
Q psy7108         113 ---GQLIMFDVESA  123 (703)
Q Consensus       113 ---g~I~vwd~~~~  123 (703)
                         ..|..|+....
T Consensus       102 ~~~~~v~r~~~~~~  115 (354)
T 3a9g_A          102 HIRNRVIRGRLDGS  115 (354)
T ss_dssp             CEEEEEEEEEECSS
T ss_pred             CcceEEEEEEECCC
Confidence               56777877654

>1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A*

Probab=94.74  E-value=0.0024  Score=65.64  Aligned_cols=54  Identities=20%  Similarity=0.174  Sum_probs=37.4

Q ss_pred             CCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhh
Q psy7108         529 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS  582 (703)
Q Consensus       529 ~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~  582 (703)
                      .++.+.+++++...+.+++.++|||+||..+..++.+.+....+++.++.++|.
T Consensus        81 ~~l~~~i~~~~~~~g~~~v~lVGhS~GG~va~~~~~~~~~~~~~v~~lV~l~~~  134 (317)
T 1tca_A           81 EYMVNAITALYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPD  134 (317)
T ss_dssp             HHHHHHHHHHHHHTTSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCC
T ss_pred             HHHHHHHHHHHHHhCCCCEEEEEEChhhHHHHHHHHHcCccchhhhEEEEECCC
Confidence            456677888887777789999999999976644333333223567777776664

>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}

Probab=94.59  E-value=2.3  Score=42.71  Aligned_cols=192  Identities=5%  Similarity=-0.001  Sum_probs=108.4

Q ss_pred             ccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCC--------------CcEEEEEcCCCceeEEEecCCCcEEEE
Q psy7108          32 DMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWD--------------KTVKLWNAVETDTQHETIQLLSDALCV   97 (703)
Q Consensus        32 d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~D--------------g~V~iWd~~~~~~~~~~~~~~~~V~~v   97 (703)
                      +.+|...  ..+...    .+--+++  ++++|+-+...              ..|+..++...+ ...+...  .  +.
T Consensus        43 ~~dg~~~--~~l~~~----~~~~i~~--~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~-~~~l~~~--~--~~  109 (302)
T 3s25_A           43 NIDGSNI--HKLSND----TAMYINA--DKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHG-STVLDPD--P--CI  109 (302)
T ss_dssp             ETTSCSC--EEEEEE----EEEEEEE--CSSEEEEEEECC------CCSSCCSEEEEEEETTSCC-CEEEECS--C--EE
T ss_pred             cCCCCCC--EEccCC----ceeeEEE--cCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCc-ceEeecC--C--cc
Confidence            3456544  555532    2345678  88988877543              356666766553 2222222  1  23


Q ss_pred             EEecCCCEEEEEE----CCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec
Q psy7108          98 AYKPDGTEIVVAT----LDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ  173 (703)
Q Consensus        98 ~~spdg~~las~s----~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~  173 (703)
                      .|+++++.|+...    .+..|...+++.... ..+..+.                      +  .+++|+++.|.-.+.
T Consensus       110 ~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~-~~lt~~~----------------------~--~~~~~~g~~iy~t~~  164 (302)
T 3s25_A          110 YASLIGNYIYYLHYDTQTATSLYRIRIDGEEK-KKIKNHY----------------------L--FTCNTSDRYFYYNNP  164 (302)
T ss_dssp             EEEEETTEEEEEEESSSSCEEEEEEETTSCCC-EEEESSC----------------------C--CCSEEETTEEEEECT
T ss_pred             EEEEeCCEEEEEeecCCCCceEEEEECCCCCe-EEEeCCC----------------------c--eEeeEECCEEEEEeC
Confidence            6788999998876    234566667764433 3333221                      1  346778888886655


Q ss_pred             -CCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCcc
Q psy7108         174 -SKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEV  252 (703)
Q Consensus       174 -dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~  252 (703)
                       ...|...++..+.....+.   .        ... ..++|++..++.....+.    ..|..-++..... ..+..  .
T Consensus       165 g~~~Iy~~~l~g~~~~~l~~---~--------~~~-~~~~P~g~~iy~t~~~~~----~~I~~~~ldG~~~-~~Lt~--~  225 (302)
T 3s25_A          165 KNGQLYRYDTASQSEALFYD---C--------NCY-KPVVLDDTNVYYMDVNRD----NAIVHVNINNPNP-VVLTE--A  225 (302)
T ss_dssp             TTCCEEEEETTTTEEEEEEC---S--------CEE-EEEEEETTEEEEEEGGGT----TEEEEECSSSCCC-EECSC--S
T ss_pred             CCceEEEEECCCCCEEEEeC---C--------Ccc-ceeeecCCEEEEEEcCCC----cEEEEEECCCCCe-EEEeC--C
Confidence             5678888987765443322   1        111 235699998888765421    2454445554442 22322  1


Q ss_pred             ceEEEEEcCCCCEEEEEeCC--C-EEEEEcCCC
Q psy7108         253 RVFCVKFSPTGQAWVAATTE--G-VHIYSLDSG  282 (703)
Q Consensus       253 ~V~~l~~spdg~~l~s~s~D--g-v~iwd~~~~  282 (703)
                      .+  ..|+|++++|..++..  + |..-+++..
T Consensus       226 ~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~  256 (302)
T 3s25_A          226 NI--EHYNVYGSLIFYQRGGDNPALCVVKNDGT  256 (302)
T ss_dssp             CE--EEEEEETTEEEEEECSSSCEEEEEETTSC
T ss_pred             Cc--ceEEECCCEEEEEECCCCcEEEEEECCCC
Confidence            23  3478889988765332  2 666666543

>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36

Probab=94.49  E-value=0.0025  Score=60.92  Aligned_cols=52  Identities=21%  Similarity=0.165  Sum_probs=38.7

Q ss_pred             cCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhhh
Q psy7108         528 LYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF  584 (703)
Q Consensus       528 ~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~  584 (703)
                      ..|+.++++|+....+..++.++|||+||..++.+..+.     +++..+..+|...
T Consensus        94 ~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-----~v~~~v~~~~~~~  145 (220)
T 2fuk_A           94 QDDLRAVAEWVRAQRPTDTLWLAGFSFGAYVSLRAAAAL-----EPQVLISIAPPAG  145 (220)
T ss_dssp             HHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH-----CCSEEEEESCCBT
T ss_pred             HHHHHHHHHHHHhcCCCCcEEEEEECHHHHHHHHHHhhc-----cccEEEEeccccc
Confidence            467788899999876667999999999998776655421     5666666666543

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=94.35  E-value=2.2  Score=43.98  Aligned_cols=167  Identities=13%  Similarity=0.141  Sum_probs=87.1

Q ss_pred             cEEEEEEecCCCEEEEE------------ECCCeEEEEEcCC--CcEEEEEecccc-CCCCCCCCccchhhcccCCccEE
Q psy7108          93 DALCVAYKPDGTEIVVA------------TLDGQLIMFDVES--AAQVGSVEARRD-LDSGRLDTDLVTREQSLKAKAVS  157 (703)
Q Consensus        93 ~V~~v~~spdg~~las~------------s~dg~I~vwd~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~V~  157 (703)
                      ...+++..|+|..++++            ..+|.|.++|.++  ++. ..+.-... +              ........
T Consensus        51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~-~~l~~~g~~~--------------~~~~f~Ph  115 (355)
T 3sre_A           51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAV-SELEIIGNTL--------------DISSFNPH  115 (355)
T ss_dssp             CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCE-EECEEECSSC--------------CGGGCCEE
T ss_pred             CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCce-EEEEccCCCC--------------CcCceeee
Confidence            44556667766544443            2689999999874  232 22221100 0              00011345


Q ss_pred             EEEEcC--CCC-EEEEEe-c--CCcEEEEECCCC-ceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCC---
Q psy7108         158 TVCYSA--DGS-CILAAG-Q--SKYICIYSSREG-ILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHE---  227 (703)
Q Consensus       158 ~i~~sp--dg~-~l~s~s-~--dg~I~lwD~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~---  227 (703)
                      .+.+.+  ++. +|+++. .  +.+|.+|++... ........-...    .....+.+++.++|.+++.....-.+   
T Consensus       116 Gi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~----~~~~pND~~v~~~G~fyvt~~~~ftd~~~  191 (355)
T 3sre_A          116 GISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHK----LLPSVNDIVAVGPEHFYATNDHYFIDPYL  191 (355)
T ss_dssp             EEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCT----TCSSEEEEEEEETTEEEEEESCSCSSHHH
T ss_pred             eeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccC----CCCCCceEEEeCCCCEEecCCcEeCCccc
Confidence            566654  454 444443 2  456888777653 222222111111    11356889999999877665421000   


Q ss_pred             --------CCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCC-C-EEEEEcCC
Q psy7108         228 --------GGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTE-G-VHIYSLDS  281 (703)
Q Consensus       228 --------~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~D-g-v~iwd~~~  281 (703)
                              .....+..+|..  + .......-...+.++||||++.|..+... + |..|+++.
T Consensus       192 ~~~e~~~~~~~g~vyr~d~~--~-~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~  252 (355)
T 3sre_A          192 KSWEMHLGLAWSFVTYYSPN--D-VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHA  252 (355)
T ss_dssp             HHHHHHTTCCCEEEEEECTT--C-CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred             ccchhhccCCccEEEEEECC--e-EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence                    111345555542  2 22222223457889999999988766654 4 89999863

>3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A

Probab=94.29  E-value=0.017  Score=56.89  Aligned_cols=50  Identities=14%  Similarity=0.153  Sum_probs=41.3

Q ss_pred             cchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccc
Q psy7108         611 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF  666 (703)
Q Consensus       611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~  666 (703)
                      -|+-+.++++...  ..+++++|||+|+.+++.++..+|+    ++.+++++|...
T Consensus        95 ~d~~~~i~~l~~~--~~~i~l~G~S~Gg~~a~~~a~~~p~----v~~~v~~~~~~~  144 (270)
T 3rm3_A           95 ASVEEGYGWLKQR--CQTIFVTGLSMGGTLTLYLAEHHPD----ICGIVPINAAVD  144 (270)
T ss_dssp             HHHHHHHHHHHTT--CSEEEEEEETHHHHHHHHHHHHCTT----CCEEEEESCCSC
T ss_pred             HHHHHHHHHHHhh--CCcEEEEEEcHhHHHHHHHHHhCCC----ccEEEEEcceec
Confidence            4677888887766  5689999999999999998888776    888888888653

>3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii}

Probab=94.26  E-value=0.0034  Score=59.49  Aligned_cols=51  Identities=16%  Similarity=0.166  Sum_probs=38.1

Q ss_pred             cCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108         528 LYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  583 (703)
Q Consensus       528 ~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~  583 (703)
                      ..|+.++++|+...-+..++.++|||+||..++... ..|    +++..+..+|..
T Consensus        88 ~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a-~~~----~v~~~v~~~~~~  138 (208)
T 3trd_A           88 VEDLKAVLRWVEHHWSQDDIWLAGFSFGAYISAKVA-YDQ----KVAQLISVAPPV  138 (208)
T ss_dssp             HHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHH-HHS----CCSEEEEESCCT
T ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEeCHHHHHHHHHh-ccC----CccEEEEecccc
Confidence            456778889998875568999999999998777655 333    566666666643

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=94.25  E-value=2.1  Score=44.91  Aligned_cols=143  Identities=14%  Similarity=0.223  Sum_probs=86.0

Q ss_pred             CCCEEEEEeCCCcEEEEEcCCCceeEEEecCC-----CcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcE---------
Q psy7108          60 SSTGMVSASWDKTVKLWNAVETDTQHETIQLL-----SDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQ---------  125 (703)
Q Consensus        60 dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~-----~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~---------  125 (703)
                      +|..++.+- ++.||.-++.... ..+.....     ..+..+..+|+|++||..+ +..|.|..+..+..         
T Consensus        31 n~t~i~~a~-~n~iR~~~i~~~~-~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~  107 (452)
T 3pbp_A           31 NGTRIVFIQ-DNIIRWYNVLTDS-LYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQD  107 (452)
T ss_dssp             TTTEEEEEE-TTEEEEEETTTCS-SCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHH
T ss_pred             CCCEEEEEE-CCEEEEEECCCCC-cceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCccccccc
Confidence            666666664 3688887876443 23333322     3678899999999999885 56899998873321         


Q ss_pred             ---EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC---CCEEEEEecCCcEEEEECCCCc--eEEEEEeccC-
Q psy7108         126 ---VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD---GSCILAAGQSKYICIYSSREGI--LLKKFTITQN-  196 (703)
Q Consensus       126 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd---g~~l~s~s~dg~I~lwD~~~~~--~~~~~~~~~~-  196 (703)
                         ...+.-..              .......+|..+.|+|-   +..|++-..|+.|++||+....  +. .+....+ 
T Consensus       108 ~~q~~ty~l~~--------------~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~  172 (452)
T 3pbp_A          108 AFQIFHYSIDE--------------EEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNS  172 (452)
T ss_dssp             TTEEEEEEGGG--------------CC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSE
T ss_pred             ccceeEEEcCC--------------cccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccc
Confidence               11111110              00112457999999994   5789999999999999998632  22 2321111 


Q ss_pred             CccccccccceeeeeccCCCEEEE
Q psy7108         197 KSLDGINDFINRRKMTEFGNVSLI  220 (703)
Q Consensus       197 ~~~~~~~~~v~~~~~spdg~~l~~  220 (703)
                      ...+.....+.+++|.+++-.+++
T Consensus       173 fg~d~~~~ev~S~~Fg~~~lTLYv  196 (452)
T 3pbp_A          173 FGLDARVNDITDLEFSKDGLTLYC  196 (452)
T ss_dssp             EESCSSCCCEEEEEECTTSSCEEE
T ss_pred             cCCCcccceEEEEEEcCCCcEEEE
Confidence            112222345667777765443333

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=94.24  E-value=1.7  Score=44.76  Aligned_cols=110  Identities=12%  Similarity=0.050  Sum_probs=62.2

Q ss_pred             CCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC---CCE
Q psy7108          91 LSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD---GSC  167 (703)
Q Consensus        91 ~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd---g~~  167 (703)
                      -.....++|.|+|+ |+++..++.|+++| .+++  ..+..-. +.             .........++++|+   +..
T Consensus        28 l~~P~~ia~~pdG~-l~V~e~~g~I~~~d-~~G~--~~~~~~~-v~-------------~~g~~g~~gia~~pdf~~~g~   89 (354)
T 3a9g_A           28 LEVPWSIAPLGGGR-YLVTERPGRLVLIS-PSGK--KLVASFD-VA-------------NVGEAGLLGLALHPEFPKKSW   89 (354)
T ss_dssp             CSCEEEEEEEETTE-EEEEETTTEEEEEC-SSCE--EEEEECC-CC-------------CSTTCSEEEEEECTTTTTSCE
T ss_pred             CCCCeEEEEcCCCe-EEEEeCCCEEEEEe-CCCc--eEeeccc-ee-------------ecCCCceeeEEeCCCCCcCCE
Confidence            45678999999997 55556779999997 3454  2222110 00             001235789999998   555


Q ss_pred             EEEEec----C----CcEEEEECCCC--ce--EE-EEEeccCCccccccccceeeeeccCCCEEEEEc
Q psy7108         168 ILAAGQ----S----KYICIYSSREG--IL--LK-KFTITQNKSLDGINDFINRRKMTEFGNVSLIET  222 (703)
Q Consensus       168 l~s~s~----d----g~I~lwD~~~~--~~--~~-~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~  222 (703)
                      |.++..    +    +.|..|+....  ..  .+ .+..-..  ...|  ....++|.|||..+++.+
T Consensus        90 lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~--~~~h--~~~~l~~~pDG~Lyvt~G  153 (354)
T 3a9g_A           90 VYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPG--AYIH--NGGRIRFGPDGMLYITTG  153 (354)
T ss_dssp             EEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEEC--CSSC--CCCCEEECTTSCEEEECC
T ss_pred             EEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCC--CCCc--CCceEEECCCCcEEEEEC
Confidence            555433    3    56778887654  11  11 1111111  0111  346799999998666543

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=94.16  E-value=0.55  Score=47.11  Aligned_cols=191  Identities=12%  Similarity=0.119  Sum_probs=95.2

Q ss_pred             CCCEEEEEeCC----CcEEEEEcCCCceeEEEecCCC--cEEEEEEecCCCEEEEEECC------CeEEEEEcCCCcEEE
Q psy7108          60 SSTGMVSASWD----KTVKLWNAVETDTQHETIQLLS--DALCVAYKPDGTEIVVATLD------GQLIMFDVESAAQVG  127 (703)
Q Consensus        60 dg~~L~sgs~D----g~V~iWd~~~~~~~~~~~~~~~--~V~~v~~spdg~~las~s~d------g~I~vwd~~~~~~~~  127 (703)
                      ++.+++.|+.+    ..+.++|..+..- ........  .-.+++ .-+++.++.|+.+      ..+.+||..+.+-..
T Consensus        55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~  132 (306)
T 3ii7_A           55 DNVVYILGGSQLFPIKRMDCYNVVKDSW-YSKLGPPTPRDSLAAC-AAEGKIYTSGGSEVGNSALYLFECYDTRTESWHT  132 (306)
T ss_dssp             TTEEEEECCBSSSBCCEEEEEETTTTEE-EEEECCSSCCBSCEEE-EETTEEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred             CCEEEEEeCCCCCCcceEEEEeCCCCeE-EECCCCCccccceeEE-EECCEEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence            56777888755    5677888877632 22221111  111222 2267777777765      458899988775432


Q ss_pred             EEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec---------CCcEEEEECCCCceEEEEEeccCCc
Q psy7108         128 SVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ---------SKYICIYSSREGILLKKFTITQNKS  198 (703)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~---------dg~I~lwD~~~~~~~~~~~~~~~~~  198 (703)
                      . ....   ..              .....++.+  +++.++.|+.         -..+.+||+.+.+-...-..+..  
T Consensus       133 ~-~~~p---~~--------------r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~--  190 (306)
T 3ii7_A          133 K-PSML---TQ--------------RCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEA--  190 (306)
T ss_dssp             E-CCCS---SC--------------CBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSC--
T ss_pred             C-CCCc---CC--------------cceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccch--
Confidence            2 1100   00              001122222  5666666653         34588999988754332111111  


Q ss_pred             cccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCc--cceeecCCccceEEEEEcCCCCEEEEEeCC----
Q psy7108         199 LDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGD--MAARVLKPEVRVFCVKFSPTGQAWVAATTE----  272 (703)
Q Consensus       199 ~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~--~~~~~~~h~~~V~~l~~spdg~~l~s~s~D----  272 (703)
                            .....+..-+++.+++++..+. .....+.+||..+.+  .+............+.+  +++.++.|+.+    
T Consensus       191 ------r~~~~~~~~~~~i~v~GG~~~~-~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~  261 (306)
T 3ii7_A          191 ------RKNHGLVFVKDKIFAVGGQNGL-GGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGR  261 (306)
T ss_dssp             ------CBSCEEEEETTEEEEECCEETT-EEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSB
T ss_pred             ------hhcceEEEECCEEEEEeCCCCC-CCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCee
Confidence                  1111122225666666554321 112357788877653  22222222222233333  56677777754    


Q ss_pred             -C-EEEEEcCCCc
Q psy7108         273 -G-VHIYSLDSGY  283 (703)
Q Consensus       273 -g-v~iwd~~~~~  283 (703)
                       . +.+||..+.+
T Consensus       262 ~~~~~~yd~~~~~  274 (306)
T 3ii7_A          262 LGHILEYNTETDK  274 (306)
T ss_dssp             CCEEEEEETTTTE
T ss_pred             eeeEEEEcCCCCe
Confidence             2 7788887654

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=94.15  E-value=0.61  Score=46.71  Aligned_cols=191  Identities=11%  Similarity=0.089  Sum_probs=93.0

Q ss_pred             CCCEEEEEeCCC-----cEEEEEcCCCceeEEEecC--CCcEEEEEEecCCCEEEEEECCC-----eEEEEEcCCCcEEE
Q psy7108          60 SSTGMVSASWDK-----TVKLWNAVETDTQHETIQL--LSDALCVAYKPDGTEIVVATLDG-----QLIMFDVESAAQVG  127 (703)
Q Consensus        60 dg~~L~sgs~Dg-----~V~iWd~~~~~~~~~~~~~--~~~V~~v~~spdg~~las~s~dg-----~I~vwd~~~~~~~~  127 (703)
                      ++.+++.|+.++     .+.+||..+..- ......  ...-.+++. -+++.++.|+.++     .+.+||+.+.+-..
T Consensus        61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~  138 (302)
T 2xn4_A           61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQW-TSVANMRDRRSTLGAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH  138 (302)
T ss_dssp             TTEEEEESCBCSSSBCCCEEEEETTTTEE-EEECCCSSCCBSCEEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEEEE
T ss_pred             CCEEEEEeCcCCCccccceEEECCCCCce-eeCCCCCccccceEEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeEee
Confidence            567777777543     577888876632 222111  111112222 2677777777653     47788887765432


Q ss_pred             EEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC-------CcEEEEECCCCceEEEEEeccCCccc
Q psy7108         128 SVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS-------KYICIYSSREGILLKKFTITQNKSLD  200 (703)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d-------g~I~lwD~~~~~~~~~~~~~~~~~~~  200 (703)
                      . ....   ..              .....++.+  +++.++.|+.+       ..+.+||+.+.+-...-..+..  ..
T Consensus       139 ~-~~~p---~~--------------r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~--r~  196 (302)
T 2xn4_A          139 V-APMN---TR--------------RSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTR--RS  196 (302)
T ss_dssp             E-CCCS---SC--------------CBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSC--CB
T ss_pred             c-CCCC---Cc--------------ccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccc--cc
Confidence            2 1100   00              001122222  56666666532       4588999988754433111111  11


Q ss_pred             cccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccc--eeecCCccceEEEEEcCCCCEEEEEeCCC-----
Q psy7108         201 GINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMA--ARVLKPEVRVFCVKFSPTGQAWVAATTEG-----  273 (703)
Q Consensus       201 ~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~--~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-----  273 (703)
                      +     .+ +..-+++.+++++.++ ......+.+||..+.+-.  ............+.  -+++.++.|+.++     
T Consensus       197 ~-----~~-~~~~~~~iyv~GG~~~-~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~--~~~~i~v~GG~~~~~~~~  267 (302)
T 2xn4_A          197 G-----AG-VGVLNNLLYAVGGHDG-PLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCA--VNGLLYVVGGDDGSCNLA  267 (302)
T ss_dssp             S-----CE-EEEETTEEEEECCBSS-SSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCC
T ss_pred             c-----cc-EEEECCEEEEECCCCC-CcccceEEEEeCCCCCEeeCCCCCCccccCeEEE--ECCEEEEECCcCCCcccc
Confidence            1     11 1223566666665443 111246788888765322  11111111122222  2566667776542     


Q ss_pred             -EEEEEcCCCc
Q psy7108         274 -VHIYSLDSGY  283 (703)
Q Consensus       274 -v~iwd~~~~~  283 (703)
                       +.+||..+.+
T Consensus       268 ~v~~yd~~~~~  278 (302)
T 2xn4_A          268 SVEYYNPTTDK  278 (302)
T ss_dssp             CEEEEETTTTE
T ss_pred             cEEEEcCCCCe
Confidence             6788877654

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=94.14  E-value=0.6  Score=46.66  Aligned_cols=192  Identities=7%  Similarity=0.016  Sum_probs=94.1

Q ss_pred             CCCEEEEEe-CC-----CcEEEEEcCCCceeEEEecCCC-cEEEEEEecCCCEEEEEECC-----CeEEEEEcCCCc---
Q psy7108          60 SSTGMVSAS-WD-----KTVKLWNAVETDTQHETIQLLS-DALCVAYKPDGTEIVVATLD-----GQLIMFDVESAA---  124 (703)
Q Consensus        60 dg~~L~sgs-~D-----g~V~iWd~~~~~~~~~~~~~~~-~V~~v~~spdg~~las~s~d-----g~I~vwd~~~~~---  124 (703)
                      ++..++.|+ .+     ..+.++|..+..- ........ .....+...+++.++.|+.+     ..+.+||..+.+   
T Consensus        14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~   92 (301)
T 2vpj_A           14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEW-SFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGV   92 (301)
T ss_dssp             CEEEEEECCEETTTEECCCEEEEETTTTEE-EECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCC
T ss_pred             CCEEEEEeCccCCCcceeEEEEEcCCCCeE-EeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCe
Confidence            456666666 33     3677888876631 11111111 11111222356777777765     358899987765   


Q ss_pred             EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC-----CcEEEEECCCCceEEEEEeccCCcc
Q psy7108         125 QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS-----KYICIYSSREGILLKKFTITQNKSL  199 (703)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d-----g~I~lwD~~~~~~~~~~~~~~~~~~  199 (703)
                      -... ...   ...              ......+.+  +++.++.|+.+     ..+.+||+.+.+-...-..+..  .
T Consensus        93 W~~~-~~~---p~~--------------r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~--r  150 (301)
T 2vpj_A           93 WYSV-APM---NVR--------------RGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTA--R  150 (301)
T ss_dssp             CEEE-CCC---SSC--------------CBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSC--C
T ss_pred             eEEC-CCC---CCC--------------ccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCC--c
Confidence            2221 100   000              011122222  56667776643     3689999988765443221111  1


Q ss_pred             ccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcccee--ecCCccceEEEEEcCCCCEEEEEeCC-----
Q psy7108         200 DGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAAR--VLKPEVRVFCVKFSPTGQAWVAATTE-----  272 (703)
Q Consensus       200 ~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~--~~~h~~~V~~l~~spdg~~l~s~s~D-----  272 (703)
                      .+      ..+..-+++.+++++.++ ......+..||..+.+-...  ..........+.+  +++.++.|+.+     
T Consensus       151 ~~------~~~~~~~~~iyv~GG~~~-~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~  221 (301)
T 2vpj_A          151 EG------AGLVVASGVIYCLGGYDG-LNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHL  221 (301)
T ss_dssp             BS------CEEEEETTEEEEECCBCS-SCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBC
T ss_pred             cc------ceEEEECCEEEEECCCCC-CcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCccc
Confidence            11      112223667666665443 22224677888776532211  1111112222222  56666777653     


Q ss_pred             C-EEEEEcCCCc
Q psy7108         273 G-VHIYSLDSGY  283 (703)
Q Consensus       273 g-v~iwd~~~~~  283 (703)
                      . +.+||..+.+
T Consensus       222 ~~v~~yd~~~~~  233 (301)
T 2vpj_A          222 SSVEAYNIRTDS  233 (301)
T ss_dssp             CCEEEEETTTTE
T ss_pred             ceEEEEeCCCCc
Confidence            2 7889987654

>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*

Probab=93.87  E-value=0.0045  Score=61.12  Aligned_cols=54  Identities=22%  Similarity=0.362  Sum_probs=40.5

Q ss_pred             cCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhhh
Q psy7108         528 LYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF  584 (703)
Q Consensus       528 ~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~  584 (703)
                      ..|+.+.++++.+..+..++.++|||+||+.++..+.+.|   ++++..+..+|...
T Consensus       102 ~~d~~~~i~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p---~~v~~~v~~~~~~~  155 (270)
T 3pfb_A          102 IEDANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYP---DLIKKVVLLAPAAT  155 (270)
T ss_dssp             HHHHHHHHHHHHTCTTEEEEEEEEETHHHHHHHHHHHHCT---TTEEEEEEESCCTH
T ss_pred             HHhHHHHHHHHHhCcCCCeEEEEEeCchhHHHHHHHHhCc---hhhcEEEEeccccc
Confidence            4577889999988777779999999999988776655443   35666676666543

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=93.85  E-value=4.4  Score=41.64  Aligned_cols=71  Identities=13%  Similarity=0.124  Sum_probs=42.9

Q ss_pred             cCeEEEEEcCCCCCC-EEEEEeCCCcEEEEEcCCCceeEEE-------ecCCCcEEEEEEecC---CCEEEEEE-C----
Q psy7108          48 GPVSCIEFSPVLSST-GMVSASWDKTVKLWNAVETDTQHET-------IQLLSDALCVAYKPD---GTEIVVAT-L----  111 (703)
Q Consensus        48 ~~V~~l~~sp~~dg~-~L~sgs~Dg~V~iWd~~~~~~~~~~-------~~~~~~V~~v~~spd---g~~las~s-~----  111 (703)
                      ..-..++|.|  +|+ ++++ ...|.|++++.. +.....+       .........++++|+   +..|.++. .    
T Consensus        18 ~~P~~i~~~p--dG~~l~V~-e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~   93 (353)
T 2g8s_A           18 DHPWALAFLP--DNHGMLIT-LRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDD   93 (353)
T ss_dssp             SSEEEEEECS--TTCCEEEE-ETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSS
T ss_pred             CCcEEEEEcC--CCCEEEEE-eCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCC
Confidence            3467999999  998 5554 467889888743 3211111       112346789999996   55554442 2    


Q ss_pred             ---CCeEEEEEcCC
Q psy7108         112 ---DGQLIMFDVES  122 (703)
Q Consensus       112 ---dg~I~vwd~~~  122 (703)
                         ...|..++...
T Consensus        94 g~~~~~v~r~~~~~  107 (353)
T 2g8s_A           94 GKAGTAVGYGRLSD  107 (353)
T ss_dssp             SCEEEEEEEEEECT
T ss_pred             CCceeEEEEEEECC
Confidence               23566666653

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=93.78  E-value=0.73  Score=46.22  Aligned_cols=191  Identities=6%  Similarity=0.027  Sum_probs=93.3

Q ss_pred             CCEEEEEeCC--CcEEEEEcCCCceeEEEecCCC-c-EEEEEEecCCCEEEEEECC----CeEEEEEcCCCcEEEEEecc
Q psy7108          61 STGMVSASWD--KTVKLWNAVETDTQHETIQLLS-D-ALCVAYKPDGTEIVVATLD----GQLIMFDVESAAQVGSVEAR  132 (703)
Q Consensus        61 g~~L~sgs~D--g~V~iWd~~~~~~~~~~~~~~~-~-V~~v~~spdg~~las~s~d----g~I~vwd~~~~~~~~~~~~~  132 (703)
                      +.+++.|+.+  ..+.+||..+..- ..+..... . -.+++ .-+++.++.|+.+    ..+.+||..+.+-...-...
T Consensus        12 ~~l~~~GG~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p   89 (306)
T 3ii7_A           12 DYRIALFGGSQPQSCRYFNPKDYSW-TDIRCPFEKRRDAACV-FWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP   89 (306)
T ss_dssp             CEEEEEECCSSTTSEEEEETTTTEE-EECCCCSCCCBSCEEE-EETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCS
T ss_pred             ceEEEEeCCCCCceEEEecCCCCCE-ecCCCCCcccceeEEE-EECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCC
Confidence            3455666543  5688888876631 11111111 1 11122 2366777777755    56889998877543221110


Q ss_pred             ccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC------CcEEEEECCCCceEEEEEeccCCccccccccc
Q psy7108         133 RDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS------KYICIYSSREGILLKKFTITQNKSLDGINDFI  206 (703)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d------g~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v  206 (703)
                      .    .              ......+.+  +++.++.|+.+      ..+.+||+.+.+-...-..+..  ...     
T Consensus        90 ~----~--------------r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~--r~~-----  142 (306)
T 3ii7_A           90 T----P--------------RDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQ--RCS-----  142 (306)
T ss_dssp             S----C--------------CBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSC--CBS-----
T ss_pred             c----c--------------ccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCC--cce-----
Confidence            0    0              001122222  56777777654      4589999988764332111111  111     


Q ss_pred             eeeeeccCCCEEEEEcccCCCCC---eeEEECCCCCCCccc--eeecCCccceEEEEEcCCCCEEEEEeCC------CEE
Q psy7108         207 NRRKMTEFGNVSLIETRETHEGG---NVVLKLPGVKKGDMA--ARVLKPEVRVFCVKFSPTGQAWVAATTE------GVH  275 (703)
Q Consensus       207 ~~~~~spdg~~l~~~~~~~~~~~---~~~i~iwd~~~~~~~--~~~~~h~~~V~~l~~spdg~~l~s~s~D------gv~  275 (703)
                       ..+..-+++.+++++..+....   ...+.+||..+.+-.  ............+.+  +++.++.|+.+      .+.
T Consensus       143 -~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~  219 (306)
T 3ii7_A          143 -HGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVE  219 (306)
T ss_dssp             -CEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEE
T ss_pred             -eEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEE
Confidence             1122236666666654432210   346778887765322  111111111222222  56666666542      277


Q ss_pred             EEEcCCCc
Q psy7108         276 IYSLDSGY  283 (703)
Q Consensus       276 iwd~~~~~  283 (703)
                      +||..+.+
T Consensus       220 ~yd~~~~~  227 (306)
T 3ii7_A          220 YYDIKLNE  227 (306)
T ss_dssp             EEETTTTE
T ss_pred             EeeCCCCc
Confidence            88887653

>2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36

Probab=93.75  E-value=0.0059  Score=59.90  Aligned_cols=52  Identities=19%  Similarity=0.141  Sum_probs=38.3

Q ss_pred             CCchhhHHHhHccCC-CcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhhh
Q psy7108         529 YDTTATIDYILNQTG-HNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF  584 (703)
Q Consensus       529 ~d~~~~~~~i~~~~~-~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~  584 (703)
                      .|+.++++|+..... ..+++++|||+||..++..+.+.|+    ++..+..+|...
T Consensus       105 ~d~~~~i~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~----v~~~v~~~~~~~  157 (249)
T 2i3d_A          105 SDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRPE----IEGFMSIAPQPN  157 (249)
T ss_dssp             HHHHHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCTT----EEEEEEESCCTT
T ss_pred             HHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcCCC----ccEEEEEcCchh
Confidence            677888999986643 3489999999999887776665544    666677776543

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=93.64  E-value=6.3  Score=42.05  Aligned_cols=117  Identities=11%  Similarity=0.134  Sum_probs=63.7

Q ss_pred             CCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC---CCE
Q psy7108          91 LSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD---GSC  167 (703)
Q Consensus        91 ~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd---g~~  167 (703)
                      -....+++|.|+|+++++-...+.|++++..+++......-...+.            .....+....++|+||   +..
T Consensus        26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~------------~~~g~~Gllgia~~Pdf~~~g~   93 (454)
T 1cru_A           26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVN------------DADGQNGLLGFAFHPDFKNNPY   93 (454)
T ss_dssp             CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCC------------CTTSSCSEEEEEECTTTTTSCE
T ss_pred             CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCcccc------------ccCCCCceeEEEECCCcCcCCE
Confidence            4467899999999876664333478888876555432221111000            0011346789999996   555


Q ss_pred             EEEEec-------------CCcEEEEECCCC--ce---EEEEEeccCCccccccccceeeeeccCCCEEEEEcc
Q psy7108         168 ILAAGQ-------------SKYICIYSSREG--IL---LKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETR  223 (703)
Q Consensus       168 l~s~s~-------------dg~I~lwD~~~~--~~---~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~  223 (703)
                      |.++..             ...|.-++...+  +.   ...+.....  ...|  ....++|.|||..+++.+.
T Consensus        94 lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~--~~~H--~~~~l~f~pDG~Lyv~~Gd  163 (454)
T 1cru_A           94 IYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPS--SKDH--QSGRLVIGPDQKIYYTIGD  163 (454)
T ss_dssp             EEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECC--CSSC--CEEEEEECTTSCEEEEECC
T ss_pred             EEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCC--CCCC--CCCeEeECCCCeEEEEECC
Confidence            554432             234666665432  11   111211111  0112  4678999999987766554

>2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A*

Probab=93.63  E-value=0.032  Score=60.02  Aligned_cols=56  Identities=25%  Similarity=0.219  Sum_probs=46.9

Q ss_pred             cchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccc
Q psy7108         611 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF  666 (703)
Q Consensus       611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~  666 (703)
                      -++.+.++.+++..+..++++||||||+.+++.++..+|+...+|+.+++++|...
T Consensus       112 ~dla~~L~~ll~~lg~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVlIapp~~  167 (484)
T 2zyr_A          112 SRLDRVIDEALAESGADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLILLDGVWG  167 (484)
T ss_dssp             HHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEEESCCCS
T ss_pred             HHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEEECCccc
Confidence            35567788888888888999999999999999999988865578899999997653

>2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A

Probab=93.62  E-value=0.025  Score=58.42  Aligned_cols=54  Identities=22%  Similarity=0.142  Sum_probs=43.6

Q ss_pred             cchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccc
Q psy7108         611 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  665 (703)
Q Consensus       611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~  665 (703)
                      -++.+.++.++...+.+++++||||||++++..++..+. ..++|+.+|.++|..
T Consensus       112 ~~l~~~I~~l~~~~g~~~v~LVGHSmGG~iA~~~a~~~~-~p~~V~~lVlla~p~  165 (342)
T 2x5x_A          112 AIIKTFIDKVKAYTGKSQVDIVAHSMGVSMSLATLQYYN-NWTSVRKFINLAGGI  165 (342)
T ss_dssp             HHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHHT-CGGGEEEEEEESCCT
T ss_pred             HHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHHcC-chhhhcEEEEECCCc
Confidence            456678888888888889999999999999988887641 135788999998764

>3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A*

Probab=93.58  E-value=0.01  Score=65.72  Aligned_cols=53  Identities=21%  Similarity=0.239  Sum_probs=39.1

Q ss_pred             cCCchhhHHHhHccCC-CcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108         528 LYDTTATIDYILNQTG-HNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  583 (703)
Q Consensus       528 ~~d~~~~~~~i~~~~~-~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~  583 (703)
                      ..|..++++|+.+.+. ..+++++|||+||+.+++++++.|   .+++..+..+|..
T Consensus       143 ~~D~~~~i~~l~~~~~~~~~igl~G~S~GG~~al~~a~~~p---~~l~aiv~~~~~~  196 (560)
T 3iii_A          143 AEDYYEVIEWAANQSWSNGNIGTNGVSYLAVTQWWVASLNP---PHLKAMIPWEGLN  196 (560)
T ss_dssp             HHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHTTCC---TTEEEEEEESCCC
T ss_pred             HHHHHHHHHHHHhCCCCCCcEEEEccCHHHHHHHHHHhcCC---CceEEEEecCCcc
Confidence            5678889999997753 268999999999998888777654   2455555555543

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=93.55  E-value=2.2  Score=44.75  Aligned_cols=155  Identities=12%  Similarity=0.097  Sum_probs=94.8

Q ss_pred             EeeecccCCceEEecCCceee-ccC-CCccccccccCC----CcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc--
Q psy7108          11 ETRETHEGGNVVLKLPGVKKG-DMA-ARVLKPEVLSGH----EGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD--   82 (703)
Q Consensus        11 ~~~~~~~~~~~~i~~~~v~~~-d~t-g~~~~~~~l~gH----~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~--   82 (703)
                      ..+..+++...++..-+.--| +.. +..-  +.+.--    -+.|..+..+|  +|++||..+. .+|.|-.+..+.  
T Consensus        25 ~~~~~~n~t~i~~a~~n~iR~~~i~~~~~Y--k~L~~~~~i~f~~i~qlvlSp--sG~lLAl~g~-~~V~Vv~LP~~~~~   99 (452)
T 3pbp_A           25 YIFSSQNGTRIVFIQDNIIRWYNVLTDSLY--HSLNFSRHLVLDDTFHVISST--SGDLLCLFND-NEIFVMEVPWGYSN   99 (452)
T ss_dssp             EEEEETTTTEEEEEETTEEEEEETTTCSSC--EEEECTTTCCCCTTCEEEECT--TSSEEEEECS-SEEEEEECCTTCSC
T ss_pred             EEEEEcCCCEEEEEECCEEEEEECCCCCcc--eEEecCcccccCceeEEEECC--CCCEEEEecC-CeEEEEEecCcccc
Confidence            334556777776666553333 222 2222  444332    23678899999  9999999865 578888876321  


Q ss_pred             ----------eeEEEe-c-----CCCcEEEEEEecC---CCEEEEEECCCeEEEEEcCCCcEE-EEEeccccCCCCCCCC
Q psy7108          83 ----------TQHETI-Q-----LLSDALCVAYKPD---GTEIVVATLDGQLIMFDVESAAQV-GSVEARRDLDSGRLDT  142 (703)
Q Consensus        83 ----------~~~~~~-~-----~~~~V~~v~~spd---g~~las~s~dg~I~vwd~~~~~~~-~~~~~~~~~~~~~~~~  142 (703)
                                ++.... +     ...+|..+.|+|-   +..|++-..|+.|++||+...... ..+.....        
T Consensus       100 ~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~--------  171 (452)
T 3pbp_A          100 VEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNN--------  171 (452)
T ss_dssp             CCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCS--------
T ss_pred             CcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhcccc--------
Confidence                      111111 1     2567999999995   468999999999999999863211 13321110        


Q ss_pred             ccchhhcccCCccEEEEEEcCCCCEEEEEe--cCCcEEEEE
Q psy7108         143 DLVTREQSLKAKAVSTVCYSADGSCILAAG--QSKYICIYS  181 (703)
Q Consensus       143 ~~~~~~~~~~~~~V~~i~~spdg~~l~s~s--~dg~I~lwD  181 (703)
                         ..........|.+++|.+++-.|...+  ..|.|+-.-
T Consensus       172 ---~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAlc  209 (452)
T 3pbp_A          172 ---SFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAFY  209 (452)
T ss_dssp             ---EEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEES
T ss_pred             ---ccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEEC
Confidence               001112225789999999887676644  677776543

>3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii}

Probab=93.32  E-value=0.03  Score=52.76  Aligned_cols=51  Identities=16%  Similarity=0.166  Sum_probs=42.5

Q ss_pred             ecchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccc
Q psy7108         610 LYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  665 (703)
Q Consensus       610 ~~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~  665 (703)
                      .-|+.+.++++....+..++.++|||+|+.+++.++ .+|    .++.+++++|..
T Consensus        88 ~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a-~~~----~v~~~v~~~~~~  138 (208)
T 3trd_A           88 VEDLKAVLRWVEHHWSQDDIWLAGFSFGAYISAKVA-YDQ----KVAQLISVAPPV  138 (208)
T ss_dssp             HHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHH-HHS----CCSEEEEESCCT
T ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEeCHHHHHHHHHh-ccC----CccEEEEecccc
Confidence            357788999999987778999999999999998888 545    677888888765

>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV}

Probab=93.31  E-value=0.051  Score=49.49  Aligned_cols=51  Identities=16%  Similarity=0.150  Sum_probs=41.5

Q ss_pred             chHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccccc
Q psy7108         612 DTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFL  667 (703)
Q Consensus       612 d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~  667 (703)
                      ++.+.++++.......++..+|||+|+.+++.++..+|     ++.+++++|....
T Consensus        59 ~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-----~~~~v~~~~~~~~  109 (176)
T 2qjw_A           59 RLQRLLEIARAATEKGPVVLAGSSLGSYIAAQVSLQVP-----TRALFLMVPPTKM  109 (176)
T ss_dssp             HHHHHHHHHHHHHTTSCEEEEEETHHHHHHHHHHTTSC-----CSEEEEESCCSCB
T ss_pred             HHHHHHHHHHhcCCCCCEEEEEECHHHHHHHHHHHhcC-----hhheEEECCcCCc
Confidence            35567777777665678999999999999999998877     7888899887654

>2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A*

Probab=93.26  E-value=0.0099  Score=64.07  Aligned_cols=46  Identities=28%  Similarity=0.293  Sum_probs=30.4

Q ss_pred             HHHhHccCCCcc-eEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108         535 IDYILNQTGHNS-LITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  583 (703)
Q Consensus       535 ~~~i~~~~~~~~-~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~  583 (703)
                      +..++..-+.++ +.++|||+||+.++....+.|+   +++.++..+|..
T Consensus       189 l~~ll~~l~~~~~~~lvGhSmGG~ial~~A~~~p~---~v~~lVli~~~~  235 (444)
T 2vat_A          189 HRQVLDRLGVRQIAAVVGASMGGMHTLEWAFFGPE---YVRKIVPIATSC  235 (444)
T ss_dssp             HHHHHHHHTCCCEEEEEEETHHHHHHHHHGGGCTT---TBCCEEEESCCS
T ss_pred             HHHHHHhcCCccceEEEEECHHHHHHHHHHHhChH---hhheEEEEeccc
Confidence            333444334567 8999999999988776666554   566666665543

>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A

Probab=93.16  E-value=0.008  Score=60.31  Aligned_cols=51  Identities=16%  Similarity=0.172  Sum_probs=35.4

Q ss_pred             cCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108         528 LYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  583 (703)
Q Consensus       528 ~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~  583 (703)
                      ..|+.++++++...  .+++.++|||+||..++....+.|   ++++.++..+|+.
T Consensus       105 ~~d~~~~~~~l~~~--~~~v~lvG~S~GG~ia~~~a~~~p---~~v~~lvl~~~~~  155 (281)
T 4fbl_A          105 TADIVAAMRWLEER--CDVLFMTGLSMGGALTVWAAGQFP---ERFAGIMPINAAL  155 (281)
T ss_dssp             HHHHHHHHHHHHHH--CSEEEEEEETHHHHHHHHHHHHST---TTCSEEEEESCCS
T ss_pred             HHHHHHHHHHHHhC--CCeEEEEEECcchHHHHHHHHhCc---hhhhhhhcccchh
Confidence            34677778887654  358999999999987776655444   3566666666643

>2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A

Probab=93.10  E-value=0.026  Score=63.94  Aligned_cols=53  Identities=13%  Similarity=0.107  Sum_probs=38.9

Q ss_pred             cCCchhhHHHhHcc-CC-CcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108         528 LYDTTATIDYILNQ-TG-HNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  583 (703)
Q Consensus       528 ~~d~~~~~~~i~~~-~~-~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~  583 (703)
                      ..|+.++++|+... +. ..+++++|||+||+++|+++++.+   .+++..+..+|+.
T Consensus       138 ~~D~~~~i~~l~~~~~~~d~rvgl~G~SyGG~~al~~a~~~~---~~lka~v~~~~~~  192 (652)
T 2b9v_A          138 TTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPH---PALKVAAPESPMV  192 (652)
T ss_dssp             HHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCC---TTEEEEEEEEECC
T ss_pred             hhHHHHHHHHHHhcCCCCCCCEEEEecCHHHHHHHHHHhcCC---CceEEEEeccccc
Confidence            46888899999977 42 259999999999998888776543   2455555555543

>1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21

Probab=93.09  E-value=0.011  Score=66.66  Aligned_cols=54  Identities=17%  Similarity=0.160  Sum_probs=39.4

Q ss_pred             cCCchhhHHHhHcc-CC-CcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhhh
Q psy7108         528 LYDTTATIDYILNQ-TG-HNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF  584 (703)
Q Consensus       528 ~~d~~~~~~~i~~~-~~-~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~  584 (703)
                      ..|+.++++|+... +. ..+++++|||+||++++.++...+   .+++..+..+|+..
T Consensus       125 ~~D~~~~i~~l~~~~~~~~~rv~l~G~S~GG~~al~~a~~~~---~~l~a~v~~~~~~d  180 (615)
T 1mpx_A          125 ATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPH---PALKVAVPESPMID  180 (615)
T ss_dssp             HHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCC---TTEEEEEEESCCCC
T ss_pred             HHHHHHHHHHHHhcCCCCCCeEEEEecCHHHHHHHHHhhcCC---CceEEEEecCCccc
Confidence            46788899999876 32 259999999999998877665543   34666666666544

>3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua}

Probab=93.03  E-value=0.024  Score=55.90  Aligned_cols=54  Identities=13%  Similarity=0.072  Sum_probs=43.0

Q ss_pred             cchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHH--HHHHHheecccc
Q psy7108         611 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQ--TKVRLNVLWAQS  664 (703)
Q Consensus       611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~--~~i~~~~~l~p~  664 (703)
                      -|+.+.++.+....+..++++||||+|++++..++..+|+-.  .+|+.++.+++.
T Consensus        78 ~~l~~~i~~l~~~~~~~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p  133 (254)
T 3ds8_A           78 KWLKIAMEDLKSRYGFTQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSP  133 (254)
T ss_dssp             HHHHHHHHHHHHHHCCSEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCC
T ss_pred             HHHHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCC
Confidence            346677788888888889999999999999999888877521  267888888863

>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*

Probab=92.94  E-value=0.033  Score=54.41  Aligned_cols=52  Identities=19%  Similarity=0.303  Sum_probs=41.2

Q ss_pred             cchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccc
Q psy7108         611 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  665 (703)
Q Consensus       611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~  665 (703)
                      -|+-+.++++.+..+..+++++|||+|+.+++.++..+|+   .++.+++++|..
T Consensus        84 ~d~~~~~~~l~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~  135 (251)
T 2wtm_A           84 TNILAVVDYAKKLDFVTDIYMAGHSQGGLSVMLAAAMERD---IIKALIPLSPAA  135 (251)
T ss_dssp             HHHHHHHHHHTTCTTEEEEEEEEETHHHHHHHHHHHHTTT---TEEEEEEESCCT
T ss_pred             HHHHHHHHHHHcCcccceEEEEEECcchHHHHHHHHhCcc---cceEEEEECcHH
Confidence            4677788988665444689999999999999988887775   477788888864

>2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens}

Probab=92.90  E-value=0.064  Score=49.93  Aligned_cols=51  Identities=16%  Similarity=0.141  Sum_probs=41.3

Q ss_pred             cchHHHHHHHHhhCCC-CceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccc
Q psy7108         611 YDTTATIDYILNQTGH-NSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF  666 (703)
Q Consensus       611 ~d~pa~i~~i~~~t~~-~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~  666 (703)
                      +++...++.++...+. .+++++|||+|+.+++.++..+|     ++.+++++|...
T Consensus        50 ~~~~~~~~~~~~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p-----v~~lvl~~~~~~  101 (194)
T 2qs9_A           50 ARESIWLPFMETELHCDEKTIIIGHSSGAIAAMRYAETHR-----VYAIVLVSAYTS  101 (194)
T ss_dssp             CCHHHHHHHHHHTSCCCTTEEEEEETHHHHHHHHHHHHSC-----CSEEEEESCCSS
T ss_pred             ccHHHHHHHHHHHhCcCCCEEEEEcCcHHHHHHHHHHhCC-----CCEEEEEcCCcc
Confidence            3555667777777776 78999999999999999888877     788888888653

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=92.87  E-value=3.1  Score=42.81  Aligned_cols=115  Identities=12%  Similarity=0.133  Sum_probs=60.2

Q ss_pred             CcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC---CCEE
Q psy7108          92 SDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD---GSCI  168 (703)
Q Consensus        92 ~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd---g~~l  168 (703)
                      .....++|.|+|+.++++...|.|++++.+ +.....+.....             ......+....++++|+   +..|
T Consensus        18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~-------------v~~~g~~g~~gia~~pdf~~~g~l   83 (353)
T 2g8s_A           18 DHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPD-------------VWAHGQGGLLDVVLAPDFAQSRRI   83 (353)
T ss_dssp             SSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCC-------------CCCSTTCSEEEEEECTTHHHHCEE
T ss_pred             CCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcc-------------cccCCCCCceeEEECCCCCCCCEE
Confidence            456899999999834455678999999853 332111111000             00011235789999996   4555


Q ss_pred             EEEe-c-------CCcEEEEECCCC--ce--EEE-EEeccCCccccccccceeeeeccCCCEEEEEc
Q psy7108         169 LAAG-Q-------SKYICIYSSREG--IL--LKK-FTITQNKSLDGINDFINRRKMTEFGNVSLIET  222 (703)
Q Consensus       169 ~s~s-~-------dg~I~lwD~~~~--~~--~~~-~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~  222 (703)
                      .++. .       ...|..+++...  +.  ... +..........|  .-..++|.|||..+++.+
T Consensus        84 Yv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h--~~~~l~~~pdG~Lyv~~G  148 (353)
T 2g8s_A           84 WLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNH--FGGRLVFDGKGYLFIALG  148 (353)
T ss_dssp             EEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSC--CCCCEEECSSSEEEEEEC
T ss_pred             EEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcc--cCccEEECCCCcEEEEEC
Confidence            5442 2       235666766543  11  111 111110000111  346799999996555543

>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens}

Probab=92.81  E-value=0.014  Score=59.83  Aligned_cols=53  Identities=21%  Similarity=0.282  Sum_probs=39.2

Q ss_pred             cCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108         528 LYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  583 (703)
Q Consensus       528 ~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~  583 (703)
                      ..|+.+.++++....+..++.++|||+||+.++..+.+.|   ++++.++..+|..
T Consensus       115 ~~d~~~~l~~l~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p---~~v~~lvl~~~~~  167 (342)
T 3hju_A          115 VRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERP---GHFAGMVLISPLV  167 (342)
T ss_dssp             HHHHHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHST---TTCSEEEEESCCC
T ss_pred             HHHHHHHHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhCc---cccceEEEECccc
Confidence            4577888899887766679999999999988777665444   3566666666653

>3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728}

Probab=92.77  E-value=0.014  Score=54.83  Aligned_cols=48  Identities=21%  Similarity=0.215  Sum_probs=32.6

Q ss_pred             hhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhh
Q psy7108         532 TATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS  582 (703)
Q Consensus       532 ~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~  582 (703)
                      .+.+..+++..+.+++.++|||+||..++..+.+.|   ++++..+..+|.
T Consensus        87 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~---~~~~~~v~~~~~  134 (207)
T 3bdi_A           87 AEFIRDYLKANGVARSVIMGASMGGGMVIMTTLQYP---DIVDGIIAVAPA  134 (207)
T ss_dssp             HHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCG---GGEEEEEEESCC
T ss_pred             HHHHHHHHHHcCCCceEEEEECccHHHHHHHHHhCc---hhheEEEEeCCc
Confidence            344455555555679999999999987776655443   356666666664

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=92.72  E-value=9.8  Score=38.88  Aligned_cols=117  Identities=11%  Similarity=-0.029  Sum_probs=65.9

Q ss_pred             ecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC---
Q psy7108          88 IQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD---  164 (703)
Q Consensus        88 ~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd---  164 (703)
                      ...-.....++|.|||..+++--..|.|++++..+++... +..-..+             .....+....++++|+   
T Consensus        28 a~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~-v~~~~~v-------------~~~g~~GllGia~~Pdf~~   93 (347)
T 3das_A           28 ATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTE-LGEVPGV-------------SPSGEGGLLGIALSPDYAS   93 (347)
T ss_dssp             ECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEE-EEECTTC-------------CCBTTBSEEEEEECTTHHH
T ss_pred             ecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEee-ecccCce-------------eecCCCCceeeEecccccc
Confidence            3345567899999999976665448999999876665422 2111000             0111336789999996   


Q ss_pred             CCEEEEE---ecCCcEEEEECCCCc--------eEEEEEeccCCccccccccceeeeeccCCCEEEEEc
Q psy7108         165 GSCILAA---GQSKYICIYSSREGI--------LLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIET  222 (703)
Q Consensus       165 g~~l~s~---s~dg~I~lwD~~~~~--------~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~  222 (703)
                      +..|.+.   ..++.|.-|.+..+.        ....+..-..  -..|  .-..++|.|||..+++.+
T Consensus        94 ~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~--~~~H--~g~~l~fgpDG~Lyvt~G  158 (347)
T 3das_A           94 DHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPK--GVIH--NGGRIAFGPDKMLYAGTG  158 (347)
T ss_dssp             HCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECC--CSSC--CCCCEEECTTSCEEEECB
T ss_pred             CCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCC--CCCc--cCccccCCCCCCEEEEEC
Confidence            3444442   234556666665421        1112221111  1112  346799999998666544

>3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum}

Probab=92.66  E-value=0.041  Score=54.13  Aligned_cols=54  Identities=13%  Similarity=0.027  Sum_probs=42.5

Q ss_pred             cchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchH--HHHHHHheecccc
Q psy7108         611 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEY--QTKVRLNVLWAQS  664 (703)
Q Consensus       611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~--~~~i~~~~~l~p~  664 (703)
                      -++.+.++++.+..+..++++||||+|+.+...++..++.-  ..+|+.+|.+++.
T Consensus        82 ~~l~~~~~~l~~~~~~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p  137 (250)
T 3lp5_A           82 VWLNTAFKALVKTYHFNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASP  137 (250)
T ss_dssp             HHHHHHHHHHHTTSCCSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCC
T ss_pred             HHHHHHHHHHHHHcCCCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCC
Confidence            34678899988888989999999999999998887765321  2367888888843

>3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV}

Probab=92.65  E-value=0.018  Score=57.48  Aligned_cols=40  Identities=25%  Similarity=0.245  Sum_probs=32.5

Q ss_pred             cCCchhhHHHhHccCC--CcceEEEEEecCceeeeeccCCCc
Q psy7108         528 LYDTTATIDYILNQTG--HNSLITLGHSLGTTNVLIAGSLRP  567 (703)
Q Consensus       528 ~~d~~~~~~~i~~~~~--~~~~~~~g~S~G~~~~~~~~~~~~  567 (703)
                      ..|+.++++|+....+  ..++.++|||+||+.++....+.|
T Consensus        82 ~~d~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~  123 (290)
T 3ksr_A           82 LDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP  123 (290)
T ss_dssp             HHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC
T ss_pred             HHHHHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC
Confidence            4688889999987753  358999999999998887776655

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=92.64  E-value=1.5  Score=44.02  Aligned_cols=179  Identities=10%  Similarity=0.064  Sum_probs=84.4

Q ss_pred             CCCEEEEEeC-----C--C----cEEEEEcCCCceeEEEecCCCcE--EEEEEecCCCEEEEEECC--------CeEEEE
Q psy7108          60 SSTGMVSASW-----D--K----TVKLWNAVETDTQHETIQLLSDA--LCVAYKPDGTEIVVATLD--------GQLIMF  118 (703)
Q Consensus        60 dg~~L~sgs~-----D--g----~V~iWd~~~~~~~~~~~~~~~~V--~~v~~spdg~~las~s~d--------g~I~vw  118 (703)
                      ++..++.|+.     .  .    .+.+||..+..- ........+-  .+++. -+++.++.|+.+        ..+.+|
T Consensus        45 ~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~  122 (315)
T 4asc_A           45 ENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEW-LGMPPLPSPRCLFGLGE-ALNSIYVVGGREIKDGERCLDSVMCY  122 (315)
T ss_dssp             TCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEE-EECCCBSSCEESCEEEE-ETTEEEEECCEESSTTCCBCCCEEEE
T ss_pred             CCEEEEEcCcccCCCCCccccccceEEecCCCCeE-EECCCCCcchhceeEEE-ECCEEEEEeCCcCCCCCcccceEEEE
Confidence            6788888873     1  1    266778766531 1211111111  11222 256666777642        358889


Q ss_pred             EcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec-C-----CcEEEEECCCCceEEEEE
Q psy7108         119 DVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ-S-----KYICIYSSREGILLKKFT  192 (703)
Q Consensus       119 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~-d-----g~I~lwD~~~~~~~~~~~  192 (703)
                      |..+.+-... .   .....              .....++.  -+++.++.|+. +     ..+.+||+.+.+-...-.
T Consensus       123 d~~~~~W~~~-~---~~p~~--------------r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~  182 (315)
T 4asc_A          123 DRLSFKWGES-D---PLPYV--------------VYGHTVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAP  182 (315)
T ss_dssp             ETTTTEEEEC-C---CCSSC--------------CBSCEEEE--ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCC
T ss_pred             CCCCCcEeEC-C---CCCCc--------------ccceeEEE--ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCC
Confidence            9887643211 1   00000              00112222  35666677765 2     468999998875432211


Q ss_pred             eccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcccee--ecCCccceEEEEEcCCCCEEEEEe
Q psy7108         193 ITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAAR--VLKPEVRVFCVKFSPTGQAWVAAT  270 (703)
Q Consensus       193 ~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~--~~~h~~~V~~l~~spdg~~l~s~s  270 (703)
                      .+..        .....+..-+++.+++++..+ .+....+.+||..+.+-...  ..........+.+  +++.++.|+
T Consensus       183 ~p~~--------r~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG  251 (315)
T 4asc_A          183 MQTA--------RSLFGATVHDGRIIVAAGVTD-TGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSL--VGTLYAIGG  251 (315)
T ss_dssp             CSSC--------CBSCEEEEETTEEEEEEEECS-SSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEE
T ss_pred             CCCc--------hhceEEEEECCEEEEEeccCC-CCccceEEEEECCCCeEEECCCCCCcccceeEEEE--CCEEEEECC
Confidence            1111        111112223667777766543 22234678888876532221  1111122222222  556667766


Q ss_pred             C
Q psy7108         271 T  271 (703)
Q Consensus       271 ~  271 (703)
                      .
T Consensus       252 ~  252 (315)
T 4asc_A          252 F  252 (315)
T ss_dssp             E
T ss_pred             c
Confidence            5

>4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A

Probab=92.61  E-value=0.017  Score=58.50  Aligned_cols=60  Identities=17%  Similarity=0.049  Sum_probs=41.5

Q ss_pred             cccCCchhhHHHhHc---cCCCcceEEEEEecCceeeeeccCCCch-hh---hhHHHhhhhhhhhhc
Q psy7108         526 LGLYDTTATIDYILN---QTGHNSLITLGHSLGTTNVLIAGSLRPE-YQ---TKVRLNVLWAQSAFL  585 (703)
Q Consensus       526 ~g~~d~~~~~~~i~~---~~~~~~~~~~g~S~G~~~~~~~~~~~~~-~~---~~~~~~~~~~p~~~~  585 (703)
                      ..+.|+.++++|+..   .-+.++++++|||+||+.++.+..+... ..   .+++..++.+|...+
T Consensus       130 ~~~~d~~~~~~~l~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~~~~~~~  196 (303)
T 4e15_A          130 QLMTQFTHFLNWIFDYTEMTKVSSLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYDL  196 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEESCCCCC
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCCeEEEEeecHHHHHHHHHHhccccccCcccccccEEEEEeeeecc
Confidence            345678889999976   3346799999999999887776654331 11   367777777765433

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=92.51  E-value=9.8  Score=38.36  Aligned_cols=193  Identities=11%  Similarity=0.189  Sum_probs=98.1

Q ss_pred             CcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEec----CCCcEEEEEEecCCCEEEEEECCCeEEEEEcCC
Q psy7108          47 EGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQ----LLSDALCVAYKPDGTEIVVATLDGQLIMFDVES  122 (703)
Q Consensus        47 ~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~----~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~  122 (703)
                      ...+.++.++|   +..++ ++.++.|..  ..++....+...    +.+.+..+.+.+++..++++ .++.|.. ..+.
T Consensus        79 ~~~~~~i~~~~---~~~~~-~g~~g~i~~--S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~Dg  150 (327)
T 2xbg_A           79 DYRFNSVSFQG---NEGWI-VGEPPIMLH--TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDS  150 (327)
T ss_dssp             CCEEEEEEEET---TEEEE-EEETTEEEE--ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESST
T ss_pred             CccEEEEEecC---CeEEE-EECCCeEEE--ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCC
Confidence            45789999976   33444 455564433  333322222221    33567888887777666554 4554422 1223


Q ss_pred             CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccc
Q psy7108         123 AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGI  202 (703)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~  202 (703)
                      |+.-......                   ....+..+++.|++.+++++...+..+-.|- .+..-..+...       .
T Consensus       151 G~tW~~~~~~-------------------~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~-gG~tW~~~~~~-------~  203 (327)
T 2xbg_A          151 GKNWQALVQE-------------------AIGVMRNLNRSPSGEYVAVSSRGSFYSTWEP-GQTAWEPHNRT-------T  203 (327)
T ss_dssp             TSSEEEEECS-------------------CCCCEEEEEECTTSCEEEEETTSSEEEEECT-TCSSCEEEECC-------S
T ss_pred             CCCCEEeecC-------------------CCcceEEEEEcCCCcEEEEECCCcEEEEeCC-CCCceeECCCC-------C
Confidence            3322222211                   1226888999999887776654333333442 12221222111       1


Q ss_pred             cccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeec----CCccceEEEEEcCCCCEEEEEeCCC-EEEE
Q psy7108         203 NDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL----KPEVRVFCVKFSPTGQAWVAATTEG-VHIY  277 (703)
Q Consensus       203 ~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~----~h~~~V~~l~~spdg~~l~s~s~Dg-v~iw  277 (703)
                      ...+..+.++++++.++++.. +      .+.+.+...++.-....    .....+.++++.+++..++++. ++ + .+
T Consensus       204 ~~~~~~~~~~~~g~~~~~~~~-G------~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~  274 (327)
T 2xbg_A          204 SRRLHNMGFTPDGRLWMIVNG-G------KIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LC  274 (327)
T ss_dssp             SSCEEEEEECTTSCEEEEETT-T------EEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EE
T ss_pred             CCccceeEECCCCCEEEEeCC-c------eEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EE
Confidence            235677888898887655432 2      34443111121111111    1223588899998887766655 55 5 45


Q ss_pred             EcCCCc
Q psy7108         278 SLDSGY  283 (703)
Q Consensus       278 d~~~~~  283 (703)
                      ..+.|+
T Consensus       275 S~DgG~  280 (327)
T 2xbg_A          275 SQDGGQ  280 (327)
T ss_dssp             ESSTTS
T ss_pred             eCCCCc
Confidence            555443

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=92.41  E-value=2.6  Score=42.36  Aligned_cols=152  Identities=13%  Similarity=0.084  Sum_probs=73.3

Q ss_pred             CCCEEEEEeC----CC-------cEEEEEcCCCceeEEEecCCC--cEEEEEEecCCCEEEEEECC-------CeEEEEE
Q psy7108          60 SSTGMVSASW----DK-------TVKLWNAVETDTQHETIQLLS--DALCVAYKPDGTEIVVATLD-------GQLIMFD  119 (703)
Q Consensus        60 dg~~L~sgs~----Dg-------~V~iWd~~~~~~~~~~~~~~~--~V~~v~~spdg~~las~s~d-------g~I~vwd  119 (703)
                      ++..++.|+.    ++       .+.++|..+..- ........  .-.+++. -+++.++.|+.+       ..+.+||
T Consensus        56 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd  133 (318)
T 2woz_A           56 QNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEW-VGLPPLPSARCLFGLGE-VDDKIYVVAGKDLQTEASLDSVLCYD  133 (318)
T ss_dssp             SSCEEEEESSCC-------CCCBEEEEEETTTTEE-EECSCBSSCBCSCEEEE-ETTEEEEEEEEBTTTCCEEEEEEEEE
T ss_pred             CCEEEEECCcccCccccCCCccccEEEEeCCCCcE-EECCCCCccccccceEE-ECCEEEEEcCccCCCCcccceEEEEe
Confidence            6788888873    12       166778766531 11111111  1112222 256777777754       2478888


Q ss_pred             cCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec------CCcEEEEECCCCceEEEEEe
Q psy7108         120 VESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ------SKYICIYSSREGILLKKFTI  193 (703)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~------dg~I~lwD~~~~~~~~~~~~  193 (703)
                      ..+.+-...-....              ...    ...++.  .+++.++.|+.      -..+.+||+.+.+-...-..
T Consensus       134 ~~~~~W~~~~~~p~--------------~r~----~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~  193 (318)
T 2woz_A          134 PVAAKWSEVKNLPI--------------KVY----GHNVIS--HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPM  193 (318)
T ss_dssp             TTTTEEEEECCCSS--------------CEE----SCEEEE--ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCC
T ss_pred             CCCCCEeECCCCCC--------------ccc----ccEEEE--ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCC
Confidence            87765332210000              001    111222  35666666653      23599999988754332111


Q ss_pred             ccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCc
Q psy7108         194 TQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGD  242 (703)
Q Consensus       194 ~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~  242 (703)
                      +..  ...     .++ ..-+++.+++++..+ .+....+.+||..+.+
T Consensus       194 p~~--r~~-----~~~-~~~~~~iyv~GG~~~-~~~~~~~~~yd~~~~~  233 (318)
T 2woz_A          194 KTP--RSM-----FGV-AIHKGKIVIAGGVTE-DGLSASVEAFDLKTNK  233 (318)
T ss_dssp             SSC--CBS-----CEE-EEETTEEEEEEEEET-TEEEEEEEEEETTTCC
T ss_pred             CCC--ccc-----ceE-EEECCEEEEEcCcCC-CCccceEEEEECCCCe
Confidence            111  111     111 223566677765443 2222467788877653

>3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis}

Probab=92.39  E-value=0.031  Score=55.00  Aligned_cols=52  Identities=15%  Similarity=0.139  Sum_probs=41.3

Q ss_pred             chHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHH--HHHHHheeccc
Q psy7108         612 DTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQ--TKVRLNVLWAQ  663 (703)
Q Consensus       612 d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~--~~i~~~~~l~p  663 (703)
                      ++-+.++++....+.++++.||||+|+.++..++..+|.-.  .+|+.+|.++.
T Consensus        82 ~l~~~i~~l~~~~~~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~  135 (249)
T 3fle_A           82 WIKEVLSQLKSQFGIQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAG  135 (249)
T ss_dssp             HHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESC
T ss_pred             HHHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCC
Confidence            36678888888888889999999999999888887755311  25888888883

>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*

Probab=92.39  E-value=0.016  Score=57.57  Aligned_cols=53  Identities=21%  Similarity=0.282  Sum_probs=37.9

Q ss_pred             cCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108         528 LYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  583 (703)
Q Consensus       528 ~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~  583 (703)
                      ..|+.+.++++....+..++.++|||+||..++..+.+.|   ++++.++..+|..
T Consensus        97 ~~d~~~~l~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p---~~v~~lvl~~~~~  149 (303)
T 3pe6_A           97 VRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERP---GHFAGMVLISPLV  149 (303)
T ss_dssp             HHHHHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHST---TTCSEEEEESCSS
T ss_pred             HHHHHHHHHHHhhccCCceEEEEEeCHHHHHHHHHHHhCc---ccccEEEEECccc
Confidence            4577778888877666679999999999987776665443   3466666666543

>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A

Probab=92.37  E-value=0.0093  Score=57.65  Aligned_cols=51  Identities=16%  Similarity=0.130  Sum_probs=36.9

Q ss_pred             cCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108         528 LYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  583 (703)
Q Consensus       528 ~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~  583 (703)
                      ..|+.++++++...  ..++.++|||+||..++..+.+.|+   .++..+..+|..
T Consensus        78 ~~d~~~~i~~l~~~--~~~~~l~G~S~Gg~~a~~~a~~~p~---~~~~~i~~~p~~  128 (251)
T 3dkr_A           78 WAESSAAVAHMTAK--YAKVFVFGLSLGGIFAMKALETLPG---ITAGGVFSSPIL  128 (251)
T ss_dssp             HHHHHHHHHHHHTT--CSEEEEEESHHHHHHHHHHHHHCSS---CCEEEESSCCCC
T ss_pred             HHHHHHHHHHHHHh--cCCeEEEEechHHHHHHHHHHhCcc---ceeeEEEecchh
Confidence            45777788888876  5799999999999887776665443   455555555543

>3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis}

Probab=92.37  E-value=0.055  Score=55.27  Aligned_cols=47  Identities=21%  Similarity=0.282  Sum_probs=36.6

Q ss_pred             HHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccc
Q psy7108         616 TIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  665 (703)
Q Consensus       616 ~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~  665 (703)
                      .+.-++...+.++++++|||+|+.+++.++..+|+   +++.+++++|..
T Consensus       135 dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~  181 (330)
T 3p2m_A          135 TLAPVLRELAPGAEFVVGMSLGGLTAIRLAAMAPD---LVGELVLVDVTP  181 (330)
T ss_dssp             HHHHHHHHSSTTCCEEEEETHHHHHHHHHHHHCTT---TCSEEEEESCCH
T ss_pred             HHHHHHHHhCCCCcEEEEECHhHHHHHHHHHhChh---hcceEEEEcCCC
Confidence            34444555566789999999999999999988775   577888888654

>3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp}

Probab=92.36  E-value=0.053  Score=52.89  Aligned_cols=52  Identities=19%  Similarity=0.167  Sum_probs=43.7

Q ss_pred             cchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccccc
Q psy7108         611 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFL  667 (703)
Q Consensus       611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~  667 (703)
                      .|+-+.++++....+..+++.+|||+|+.+++.++..     ..++.+++++|+..+
T Consensus        80 ~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~-----~~v~~~v~~~~~~~~  131 (275)
T 3h04_A           80 EDVYASFDAIQSQYSNCPIFTFGRSSGAYLSLLIARD-----RDIDGVIDFYGYSRI  131 (275)
T ss_dssp             HHHHHHHHHHHHTTTTSCEEEEEETHHHHHHHHHHHH-----SCCSEEEEESCCSCS
T ss_pred             HHHHHHHHHHHhhCCCCCEEEEEecHHHHHHHHHhcc-----CCccEEEeccccccc
Confidence            5677899999998888899999999999998887776     567788888887754

>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*

Probab=92.35  E-value=0.045  Score=53.64  Aligned_cols=53  Identities=23%  Similarity=0.368  Sum_probs=44.4

Q ss_pred             cchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccc
Q psy7108         611 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF  666 (703)
Q Consensus       611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~  666 (703)
                      -|+.+.++++....+..+++++|||+|+.+++.++..+|+   +++.+++++|...
T Consensus       103 ~d~~~~i~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~---~v~~~v~~~~~~~  155 (270)
T 3pfb_A          103 EDANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPD---LIKKVVLLAPAAT  155 (270)
T ss_dssp             HHHHHHHHHHHTCTTEEEEEEEEETHHHHHHHHHHHHCTT---TEEEEEEESCCTH
T ss_pred             HhHHHHHHHHHhCcCCCeEEEEEeCchhHHHHHHHHhCch---hhcEEEEeccccc
Confidence            4778899999888777799999999999999988887665   4778888888764

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=92.35  E-value=2.7  Score=42.21  Aligned_cols=189  Identities=11%  Similarity=0.071  Sum_probs=91.4

Q ss_pred             EEEEEeCCCcEEEEEcCCCceeEEEecC-CCcEEEEEEecCCCEEEEEEC----C-------CeEEEEEcCCCcEEEEEe
Q psy7108          63 GMVSASWDKTVKLWNAVETDTQHETIQL-LSDALCVAYKPDGTEIVVATL----D-------GQLIMFDVESAAQVGSVE  130 (703)
Q Consensus        63 ~L~sgs~Dg~V~iWd~~~~~~~~~~~~~-~~~V~~v~~spdg~~las~s~----d-------g~I~vwd~~~~~~~~~~~  130 (703)
                      +++.|+  ..+.+||..+++-....... .......+...+++.++.|+.    +       ..+.+||..+.+-.. +.
T Consensus         7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~-~~   83 (315)
T 4asc_A            7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLG-MP   83 (315)
T ss_dssp             EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEE-CC
T ss_pred             EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEE-CC
Confidence            445555  46889998877532211111 122233334457788888874    1       127788887765322 11


Q ss_pred             ccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC--------CcEEEEECCCCceEEEEEeccCCccccc
Q psy7108         131 ARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS--------KYICIYSSREGILLKKFTITQNKSLDGI  202 (703)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d--------g~I~lwD~~~~~~~~~~~~~~~~~~~~~  202 (703)
                      ...   .          ...    ....+.+  +++.++.|+.+        ..+.+||+.+.+-...-..+..      
T Consensus        84 ~~p---~----------~r~----~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~------  138 (315)
T 4asc_A           84 PLP---S----------PRC----LFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYV------  138 (315)
T ss_dssp             CBS---S----------CEE----SCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSC------
T ss_pred             CCC---c----------chh----ceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCc------
Confidence            100   0          000    1112222  56666666632        4589999988754322111111      


Q ss_pred             cccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCc--cceeecCCccceEEEEEcCCCCEEEEEeCCC------E
Q psy7108         203 NDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGD--MAARVLKPEVRVFCVKFSPTGQAWVAATTEG------V  274 (703)
Q Consensus       203 ~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~--~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg------v  274 (703)
                        .....+..-+++.+++++..........+.+||..+.+  .+............+.+  +++.++.|+.++      +
T Consensus       139 --r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~  214 (315)
T 4asc_A          139 --VYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSA  214 (315)
T ss_dssp             --CBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEE
T ss_pred             --ccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceE
Confidence              11112223456666666652222223467788877653  22222111112222222  566677776543      5


Q ss_pred             EEEEcCCCc
Q psy7108         275 HIYSLDSGY  283 (703)
Q Consensus       275 ~iwd~~~~~  283 (703)
                      .+||..+.+
T Consensus       215 ~~yd~~~~~  223 (315)
T 4asc_A          215 EVYSITDNK  223 (315)
T ss_dssp             EEEETTTTE
T ss_pred             EEEECCCCe
Confidence            678876653

>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}

Probab=92.23  E-value=0.03  Score=54.99  Aligned_cols=48  Identities=27%  Similarity=0.446  Sum_probs=32.3

Q ss_pred             hhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108         533 ATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  583 (703)
Q Consensus       533 ~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~  583 (703)
                      +.+..++..-+..++.++|||+||+.++..+.+.|   ++++.++..+|..
T Consensus        83 ~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p---~~v~~lvl~~~~~  130 (286)
T 3qit_A           83 AQIDRVIQELPDQPLLLVGHSMGAMLATAIASVRP---KKIKELILVELPL  130 (286)
T ss_dssp             HHHHHHHHHSCSSCEEEEEETHHHHHHHHHHHHCG---GGEEEEEEESCCC
T ss_pred             HHHHHHHHhcCCCCEEEEEeCHHHHHHHHHHHhCh---hhccEEEEecCCC
Confidence            33444454445678999999999988877666544   3566666666543

>3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens}

Probab=92.21  E-value=0.017  Score=61.70  Aligned_cols=52  Identities=25%  Similarity=0.218  Sum_probs=38.2

Q ss_pred             cCCchhhHHHhHccCC--CcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108         528 LYDTTATIDYILNQTG--HNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  583 (703)
Q Consensus       528 ~~d~~~~~~~i~~~~~--~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~  583 (703)
                      +.|+.++++|+.+..+  ..+++++|||+||..++.+..+.|+    ++..+..+|..
T Consensus       206 ~~d~~~~~~~l~~~~~v~~~~i~l~G~S~GG~lAl~~a~~~p~----v~a~V~~~~~~  259 (422)
T 3k2i_A          206 LEYFEEAVCYMLQHPQVKGPGIGLLGISLGADICLSMASFLKN----VSATVSINGSG  259 (422)
T ss_dssp             THHHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSS----EEEEEEESCCS
T ss_pred             HHHHHHHHHHHHhCcCcCCCCEEEEEECHHHHHHHHHHhhCcC----ccEEEEEcCcc
Confidence            4466778999988754  4799999999999988776665554    55556655543

>1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26

Probab=92.20  E-value=0.073  Score=52.00  Aligned_cols=52  Identities=29%  Similarity=0.270  Sum_probs=42.3

Q ss_pred             ecchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccc
Q psy7108         610 LYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  665 (703)
Q Consensus       610 ~~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~  665 (703)
                      .|++.++++.++..-+ ++++++|||+|+.+++.++..+|+   +|+.++.++|..
T Consensus        58 ~~~~~~~~~~l~~~l~-~~~~lvGhS~Gg~va~~~a~~~p~---~v~~lvl~~~~~  109 (258)
T 1m33_A           58 ALSLADMAEAVLQQAP-DKAIWLGWSLGGLVASQIALTHPE---RVRALVTVASSP  109 (258)
T ss_dssp             CCCHHHHHHHHHTTSC-SSEEEEEETHHHHHHHHHHHHCGG---GEEEEEEESCCS
T ss_pred             CcCHHHHHHHHHHHhC-CCeEEEEECHHHHHHHHHHHHhhH---hhceEEEECCCC
Confidence            4667777888877766 789999999999999999988776   577888887653

>3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis}

Probab=92.15  E-value=0.024  Score=55.54  Aligned_cols=46  Identities=20%  Similarity=0.083  Sum_probs=30.9

Q ss_pred             HHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhhh
Q psy7108         536 DYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF  584 (703)
Q Consensus       536 ~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~  584 (703)
                      ..+++.-+.+++.++|||+||..++..+.+.   .++++.++..+|...
T Consensus        82 ~~~~~~l~~~~~~lvG~S~Gg~~a~~~a~~~---p~~v~~~vl~~~~~~  127 (278)
T 3oos_A           82 EAIREALYINKWGFAGHSAGGMLALVYATEA---QESLTKIIVGGAAAS  127 (278)
T ss_dssp             HHHHHHTTCSCEEEEEETHHHHHHHHHHHHH---GGGEEEEEEESCCSB
T ss_pred             HHHHHHhCCCeEEEEeecccHHHHHHHHHhC---chhhCeEEEecCccc
Confidence            3344444557899999999998777665543   345777776666543

>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36

Probab=92.08  E-value=0.057  Score=51.21  Aligned_cols=53  Identities=21%  Similarity=0.149  Sum_probs=44.4

Q ss_pred             ecchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccccc
Q psy7108         610 LYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFL  667 (703)
Q Consensus       610 ~~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~  667 (703)
                      ..|+.+.++++....+..++.++|||+|+.+++.++...     +++.+++++|....
T Consensus        94 ~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-----~v~~~v~~~~~~~~  146 (220)
T 2fuk_A           94 QDDLRAVAEWVRAQRPTDTLWLAGFSFGAYVSLRAAAAL-----EPQVLISIAPPAGR  146 (220)
T ss_dssp             HHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH-----CCSEEEEESCCBTT
T ss_pred             HHHHHHHHHHHHhcCCCCcEEEEEECHHHHHHHHHHhhc-----cccEEEEecccccc
Confidence            467889999999887777899999999999998887763     67888888887654

>3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans}

Probab=92.07  E-value=0.022  Score=60.47  Aligned_cols=51  Identities=14%  Similarity=0.020  Sum_probs=37.7

Q ss_pred             cCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhhh
Q psy7108         528 LYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF  584 (703)
Q Consensus       528 ~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~  584 (703)
                      ..|+.++++|+....  .++.++|||+||+.++.+..+.|    +++..++.+|...
T Consensus       213 ~~d~~~~~~~l~~~~--~~v~l~G~S~GG~~a~~~a~~~p----~v~~~v~~~p~~~  263 (405)
T 3fnb_A          213 RAAISAILDWYQAPT--EKIAIAGFSGGGYFTAQAVEKDK----RIKAWIASTPIYD  263 (405)
T ss_dssp             HHHHHHHHHHCCCSS--SCEEEEEETTHHHHHHHHHTTCT----TCCEEEEESCCSC
T ss_pred             HHHHHHHHHHHHhcC--CCEEEEEEChhHHHHHHHHhcCc----CeEEEEEecCcCC
Confidence            346677888888664  78999999999998877766654    4566666666543

>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*

Probab=92.06  E-value=0.075  Score=52.59  Aligned_cols=54  Identities=20%  Similarity=0.273  Sum_probs=45.2

Q ss_pred             cchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccccc
Q psy7108         611 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFL  667 (703)
Q Consensus       611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~  667 (703)
                      -|+-+.++++....+..+++++|||+|+.+++.++..+|+   +++.+++++|....
T Consensus        98 ~d~~~~l~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~lvl~~~~~~~  151 (303)
T 3pe6_A           98 RDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPG---HFAGMVLISPLVLA  151 (303)
T ss_dssp             HHHHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTT---TCSEEEEESCSSSB
T ss_pred             HHHHHHHHHHhhccCCceEEEEEeCHHHHHHHHHHHhCcc---cccEEEEECccccC
Confidence            4677888888888777789999999999999999888765   57888899887654

>2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei}

Probab=91.99  E-value=0.082  Score=54.47  Aligned_cols=53  Identities=17%  Similarity=0.105  Sum_probs=43.4

Q ss_pred             cchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhc--CCchHHHHHHHheecccccc
Q psy7108         611 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGS--LRPEYQTKVRLNVLWAQSAF  666 (703)
Q Consensus       611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s--~~~~~~~~i~~~~~l~p~~~  666 (703)
                      +|+.+.++++...-+..+++++|||+|+.+++.++.  .+|+   +|+.+|+++|+..
T Consensus        92 ~d~~~~~~~l~~~l~~~~~~LvGhSmGG~iAl~~A~~~~~p~---rV~~lVL~~~~~~  146 (335)
T 2q0x_A           92 EDVDDLIGILLRDHCMNEVALFATSTGTQLVFELLENSAHKS---SITRVILHGVVCD  146 (335)
T ss_dssp             HHHHHHHHHHHHHSCCCCEEEEEEGGGHHHHHHHHHHCTTGG---GEEEEEEEEECCC
T ss_pred             HHHHHHHHHHHHHcCCCcEEEEEECHhHHHHHHHHHhccchh---ceeEEEEECCccc
Confidence            678888999887777788999999999999988777  4454   6788888888653

>3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens}

Probab=91.99  E-value=0.017  Score=62.36  Aligned_cols=51  Identities=22%  Similarity=0.203  Sum_probs=37.6

Q ss_pred             cCCchhhHHHhHccCC--CcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhh
Q psy7108         528 LYDTTATIDYILNQTG--HNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS  582 (703)
Q Consensus       528 ~~d~~~~~~~i~~~~~--~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~  582 (703)
                      +.|..++++|+....+  ..+++++|||+||..++....+.|+    ++..+..+|.
T Consensus       222 ~~d~~~a~~~l~~~~~vd~~~i~l~G~S~GG~lAl~~A~~~p~----v~a~V~~~~~  274 (446)
T 3hlk_A          222 LEYFEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKG----ITAAVVINGS  274 (446)
T ss_dssp             HHHHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSC----EEEEEEESCC
T ss_pred             HHHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHHhCCC----ceEEEEEcCc
Confidence            4466778999998765  3699999999999988776665554    5555555554

>3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida}

Probab=91.90  E-value=0.15  Score=49.49  Aligned_cols=45  Identities=7%  Similarity=-0.009  Sum_probs=36.0

Q ss_pred             HHHHhhCCCCceEEEEeChhHHHHHHHhcCC-chHHHHHHHheeccccc
Q psy7108         618 DYILNQTGHNSLITLGHSLGTTNVLIAGSLR-PEYQTKVRLNVLWAQSA  665 (703)
Q Consensus       618 ~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~-~~~~~~i~~~~~l~p~~  665 (703)
                      .-++...+..+++++|||+|+.+++.++..+ |+   .++.+++++|..
T Consensus        78 ~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~---~v~~lvl~~~~~  123 (264)
T 3ibt_A           78 LAFIDAKGIRDFQMVSTSHGCWVNIDVCEQLGAA---RLPKTIIIDWLL  123 (264)
T ss_dssp             HHHHHHTTCCSEEEEEETTHHHHHHHHHHHSCTT---TSCEEEEESCCS
T ss_pred             HHHHHhcCCCceEEEecchhHHHHHHHHHhhChh---hhheEEEecCCC
Confidence            3344455667899999999999999999887 75   578888888876

>3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A

Probab=91.87  E-value=0.0096  Score=58.71  Aligned_cols=50  Identities=14%  Similarity=0.195  Sum_probs=37.3

Q ss_pred             cCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108         528 LYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  583 (703)
Q Consensus       528 ~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~  583 (703)
                      ..|+.+.++++.+.  ..++.++|||+||+.++..+.+.|+    ++..+..+|..
T Consensus        94 ~~d~~~~i~~l~~~--~~~i~l~G~S~Gg~~a~~~a~~~p~----v~~~v~~~~~~  143 (270)
T 3rm3_A           94 VASVEEGYGWLKQR--CQTIFVTGLSMGGTLTLYLAEHHPD----ICGIVPINAAV  143 (270)
T ss_dssp             HHHHHHHHHHHHTT--CSEEEEEEETHHHHHHHHHHHHCTT----CCEEEEESCCS
T ss_pred             HHHHHHHHHHHHhh--CCcEEEEEEcHhHHHHHHHHHhCCC----ccEEEEEccee
Confidence            35777888888866  5789999999999988776665544    66666666643

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=91.83  E-value=0.87  Score=45.77  Aligned_cols=190  Identities=9%  Similarity=-0.009  Sum_probs=91.3

Q ss_pred             CCCEEEEEeC----C-----CcEEEEEcCCCceeEEEecC---CCcEEEEEEecCCCEEEEEECC-----CeEEEEEcCC
Q psy7108          60 SSTGMVSASW----D-----KTVKLWNAVETDTQHETIQL---LSDALCVAYKPDGTEIVVATLD-----GQLIMFDVES  122 (703)
Q Consensus        60 dg~~L~sgs~----D-----g~V~iWd~~~~~~~~~~~~~---~~~V~~v~~spdg~~las~s~d-----g~I~vwd~~~  122 (703)
                      ++.+++.|+.    +     ..+.++|..+..- ......   .....++.  -+++.++.|+.+     ..+.+||..+
T Consensus        70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~  146 (308)
T 1zgk_A           70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQW-SPCAPMSVPRNRIGVGV--IDGHIYAVGGSHGCIHHNSVERYEPER  146 (308)
T ss_dssp             TTEEEEECCEEEETTEEEECCCEEEEETTTTEE-EECCCCSSCCBTCEEEE--ETTEEEEECCEETTEECCCEEEEETTT
T ss_pred             CCEEEEECCCcCCCCCCeecceEEEECCCCCeE-eECCCCCcCccccEEEE--ECCEEEEEcCCCCCcccccEEEECCCC
Confidence            5677777765    2     3577888876631 111111   11112222  266777776643     3588888877


Q ss_pred             CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC-----CcEEEEECCCCceEEEEEeccCC
Q psy7108         123 AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS-----KYICIYSSREGILLKKFTITQNK  197 (703)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d-----g~I~lwD~~~~~~~~~~~~~~~~  197 (703)
                      .+-...-.    ....              .....++.+  +++.++.|+.+     ..+.+||+.+.+-...-..+.. 
T Consensus       147 ~~W~~~~~----~p~~--------------r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-  205 (308)
T 1zgk_A          147 DEWHLVAP----MLTR--------------RIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTI-  205 (308)
T ss_dssp             TEEEECCC----CSSC--------------CBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSC-
T ss_pred             CeEeECCC----CCcc--------------ccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCc-
Confidence            64322110    0000              011122223  56677777654     4589999987754322111110 


Q ss_pred             ccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccc--eeecCCccceEEEEEcCCCCEEEEEeCCC--
Q psy7108         198 SLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMA--ARVLKPEVRVFCVKFSPTGQAWVAATTEG--  273 (703)
Q Consensus       198 ~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~--~~~~~h~~~V~~l~~spdg~~l~s~s~Dg--  273 (703)
                       .     .-.+++ .-+++.+++++..+ ......+.+||..+.+-.  ............+.+  +++.++.|+.++  
T Consensus       206 -r-----~~~~~~-~~~~~iyv~GG~~~-~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~  275 (308)
T 1zgk_A          206 -R-----SGAGVC-VLHNCIYAAGGYDG-QDQLNSVERYDVETETWTFVAPMKHRRSALGITVH--QGRIYVLGGYDGHT  275 (308)
T ss_dssp             -C-----BSCEEE-EETTEEEEECCBCS-SSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSC
T ss_pred             -c-----ccceEE-EECCEEEEEeCCCC-CCccceEEEEeCCCCcEEECCCCCCCccceEEEEE--CCEEEEEcCcCCCc
Confidence             0     111122 22566666665443 222246788887765322  111111112222222  566667776432  


Q ss_pred             ----EEEEEcCCCc
Q psy7108         274 ----VHIYSLDSGY  283 (703)
Q Consensus       274 ----v~iwd~~~~~  283 (703)
                          +.+||..+.+
T Consensus       276 ~~~~v~~yd~~~~~  289 (308)
T 1zgk_A          276 FLDSVECYDPDTDT  289 (308)
T ss_dssp             BCCEEEEEETTTTE
T ss_pred             ccceEEEEcCCCCE
Confidence                6677876653

>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}

Probab=91.80  E-value=0.021  Score=57.27  Aligned_cols=46  Identities=24%  Similarity=0.254  Sum_probs=31.3

Q ss_pred             hHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhh
Q psy7108         534 TIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS  582 (703)
Q Consensus       534 ~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~  582 (703)
                      .+..++..-+.+++.++|||+||..++.+..+.|+   +++.++..+|.
T Consensus       103 ~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~lvl~~~~  148 (315)
T 4f0j_A          103 NTHALLERLGVARASVIGHSMGGMLATRYALLYPR---QVERLVLVNPI  148 (315)
T ss_dssp             HHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHCGG---GEEEEEEESCS
T ss_pred             HHHHHHHHhCCCceEEEEecHHHHHHHHHHHhCcH---hhheeEEecCc
Confidence            34444544456799999999999887776665443   56666666654

>3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP}

Probab=91.73  E-value=0.015  Score=60.02  Aligned_cols=52  Identities=23%  Similarity=0.217  Sum_probs=38.3

Q ss_pred             cccCCchhhHHHhHccCC--CcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhh
Q psy7108         526 LGLYDTTATIDYILNQTG--HNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQ  581 (703)
Q Consensus       526 ~g~~d~~~~~~~i~~~~~--~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p  581 (703)
                      .-+.|+.++++|+.....  .++++++|||+||..++....+.|+    ++..+..+|
T Consensus       179 ~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~----v~~~vl~~p  232 (346)
T 3fcy_A          179 HIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPR----VRKVVSEYP  232 (346)
T ss_dssp             HHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTT----CCEEEEESC
T ss_pred             HHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhCcc----ccEEEECCC
Confidence            345788889999987763  4799999999999887776655443    555555555

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=91.70  E-value=14  Score=39.33  Aligned_cols=107  Identities=12%  Similarity=0.119  Sum_probs=61.4

Q ss_pred             CcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEec---------CCCcEEEEEEecC---CCEEEEEEC---
Q psy7108          47 EGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQ---------LLSDALCVAYKPD---GTEIVVATL---  111 (703)
Q Consensus        47 ~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~---------~~~~V~~v~~spd---g~~las~s~---  111 (703)
                      -..-.+++|.|  +|+++++-...+.|++++..++.. ..+..         .......++|+||   +..|.++..   
T Consensus        26 l~~P~~~a~~p--dG~l~V~e~~gg~I~~~~~~~g~~-~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~  102 (454)
T 1cru_A           26 LNKPHALLWGP--DNQIWLTERATGKILRVNPESGSV-KTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKN  102 (454)
T ss_dssp             CSSEEEEEECT--TSCEEEEETTTCEEEEECTTTCCE-EEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEEC
T ss_pred             CCCceEEEEcC--CCcEEEEEcCCCEEEEEECCCCcE-eEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccc
Confidence            34567999999  999887765445688777544432 22211         2456789999996   555544432   


Q ss_pred             ----------CCeEEEEEcCCC--cE---EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe
Q psy7108         112 ----------DGQLIMFDVESA--AQ---VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG  172 (703)
Q Consensus       112 ----------dg~I~vwd~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s  172 (703)
                                ...|.-++...+  +.   ...+....                .........++|.|||++.++.+
T Consensus       103 ~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p----------------~~~~H~~~~l~f~pDG~Lyv~~G  162 (454)
T 1cru_A          103 PKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLP----------------SSKDHQSGRLVIGPDQKIYYTIG  162 (454)
T ss_dssp             TTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEEC----------------CCSSCCEEEEEECTTSCEEEEEC
T ss_pred             cCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCC----------------CCCCCCCCeEeECCCCeEEEEEC
Confidence                      134555655332  11   11111100                00112468899999998777654

>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0

Probab=91.69  E-value=0.067  Score=51.85  Aligned_cols=34  Identities=26%  Similarity=0.531  Sum_probs=26.2

Q ss_pred             cceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhh
Q psy7108         545 NSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQ  581 (703)
Q Consensus       545 ~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p  581 (703)
                      .++.++|||+||+.++....+.|+   +++..+..+|
T Consensus        73 ~~~~lvGhS~Gg~~a~~~a~~~p~---~v~~lvl~~~  106 (258)
T 3dqz_A           73 EEVILVGFSFGGINIALAADIFPA---KIKVLVFLNA  106 (258)
T ss_dssp             CCEEEEEETTHHHHHHHHHTTCGG---GEEEEEEESC
T ss_pred             CceEEEEeChhHHHHHHHHHhChH---hhcEEEEecC
Confidence            789999999999988887776654   5666665555

>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*

Probab=91.68  E-value=0.025  Score=55.32  Aligned_cols=51  Identities=18%  Similarity=0.276  Sum_probs=36.4

Q ss_pred             CCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhh
Q psy7108         529 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS  582 (703)
Q Consensus       529 ~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~  582 (703)
                      .|+.+.++++.+..+.+++.++|||+||..++....+.|   ++++.++..+|.
T Consensus        84 ~d~~~~~~~l~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~  134 (251)
T 2wtm_A           84 TNILAVVDYAKKLDFVTDIYMAGHSQGGLSVMLAAAMER---DIIKALIPLSPA  134 (251)
T ss_dssp             HHHHHHHHHHTTCTTEEEEEEEEETHHHHHHHHHHHHTT---TTEEEEEEESCC
T ss_pred             HHHHHHHHHHHcCcccceEEEEEECcchHHHHHHHHhCc---ccceEEEEECcH
Confidence            466777888876544468999999999988776555444   346666666664

>2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A*

Probab=91.66  E-value=0.067  Score=54.48  Aligned_cols=36  Identities=19%  Similarity=0.266  Sum_probs=30.5

Q ss_pred             CCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccc
Q psy7108         626 HNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS  664 (703)
Q Consensus       626 ~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~  664 (703)
                      .+++++||||+|+++++.++..+|+   +|+.+++++|.
T Consensus       103 ~~~~~lvGhS~Gg~ia~~~A~~~p~---~v~~lvl~~~~  138 (328)
T 2cjp_A          103 EEKVFVVAHDWGALIAWHLCLFRPD---KVKALVNLSVH  138 (328)
T ss_dssp             CSSEEEEEETHHHHHHHHHHHHCGG---GEEEEEEESCC
T ss_pred             CCCeEEEEECHHHHHHHHHHHhChh---heeEEEEEccC
Confidence            5689999999999999999988776   57788887754

>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*

Probab=91.63  E-value=0.016  Score=55.68  Aligned_cols=43  Identities=28%  Similarity=0.283  Sum_probs=33.3

Q ss_pred             hcccCCchhhHHHhHccCC-CcceEEEEEecCceeeeeccCCCc
Q psy7108         525 ELGLYDTTATIDYILNQTG-HNSLITLGHSLGTTNVLIAGSLRP  567 (703)
Q Consensus       525 ~~g~~d~~~~~~~i~~~~~-~~~~~~~g~S~G~~~~~~~~~~~~  567 (703)
                      +....|+.++++|+..... ..+++++|||+||..++....+.|
T Consensus        94 ~~~~~d~~~~~~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~  137 (236)
T 1zi8_A           94 EAGVGDLEAAIRYARHQPYSNGKVGLVGYSLGGALAFLVASKGY  137 (236)
T ss_dssp             HHHHHHHHHHHHHHTSSTTEEEEEEEEEETHHHHHHHHHHHHTC
T ss_pred             chhhHHHHHHHHHHHhccCCCCCEEEEEECcCHHHHHHHhccCC
Confidence            3445688889999987754 479999999999988777665544

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=91.62  E-value=6.2  Score=37.48  Aligned_cols=137  Identities=8%  Similarity=-0.020  Sum_probs=74.8

Q ss_pred             CCCEEEEEeCCCcEEEEEcCCCce-----eEEEecC--CCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEE------
Q psy7108          60 SSTGMVSASWDKTVKLWNAVETDT-----QHETIQL--LSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQV------  126 (703)
Q Consensus        60 dg~~L~sgs~Dg~V~iWd~~~~~~-----~~~~~~~--~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~------  126 (703)
                      ....|+....| +++.=....+..     .......  =..+.+++|+|+|.+.++  .+|.++-.+..+.+..      
T Consensus         3 ~~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~   79 (236)
T 1tl2_A            3 GESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRA   79 (236)
T ss_dssp             CCCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHC
T ss_pred             cceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccc
Confidence            34566677777 665544443331     1122222  246779999999986666  6777666665432110      


Q ss_pred             EEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccc
Q psy7108         127 GSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFI  206 (703)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v  206 (703)
                      ..+ +...                  -....++.|.|+|.+.++  .||.|+-++..+..... ........-.+--..+
T Consensus        80 t~I-G~~G------------------w~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~-Wl~~a~~vg~~gw~~~  137 (236)
T 1tl2_A           80 KKI-GNGG------------------WNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDN-WIARATEVGSGGWSGF  137 (236)
T ss_dssp             EEE-ECSC------------------GGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCC-HHHHSEEEECSSGGGE
T ss_pred             cEe-cccc------------------cccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCc-eeccccEeccCCCCce
Confidence            011 0000                  002468899999987777  56988888764321110 0000000000011356


Q ss_pred             eeeeeccCCCEEEEE
Q psy7108         207 NRRKMTEFGNVSLIE  221 (703)
Q Consensus       207 ~~~~~spdg~~l~~~  221 (703)
                      ..+.+.|+|...++.
T Consensus       138 ~~lff~p~G~Lyav~  152 (236)
T 1tl2_A          138 KFLFFHPNGYLYAVH  152 (236)
T ss_dssp             EEEEECTTSCEEEEE
T ss_pred             EEEEECCCceEEEEe
Confidence            889999999988887

>2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2}

Probab=91.60  E-value=0.015  Score=60.07  Aligned_cols=51  Identities=22%  Similarity=0.405  Sum_probs=36.0

Q ss_pred             cCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchh-hhhHHHhhhhhh
Q psy7108         528 LYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEY-QTKVRLNVLWAQ  581 (703)
Q Consensus       528 ~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~-~~~~~~~~~~~p  581 (703)
                      ..|+.+.++++....+..++.++|||+||..++..+.+   + .++++.++..+|
T Consensus       127 ~~d~~~~~~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~---~~p~~v~~lvl~~~  178 (354)
T 2rau_A          127 ISDIKEVVSFIKRDSGQERIYLAGESFGGIAALNYSSL---YWKNDIKGLILLDG  178 (354)
T ss_dssp             HHHHHHHHHHHHHHHCCSSEEEEEETHHHHHHHHHHHH---HHHHHEEEEEEESC
T ss_pred             HHHHHHHHHHHHHhcCCceEEEEEECHhHHHHHHHHHh---cCccccceEEEecc
Confidence            35778888888765456789999999999877665543   3 345666666643

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=91.55  E-value=1.7  Score=43.36  Aligned_cols=191  Identities=9%  Similarity=0.055  Sum_probs=91.2

Q ss_pred             CCEEEEEeCC----CcEEEEEcCCCceeEEEecCCCc--EEEEEEecCCCEEEEEECC-----CeEEEEEcCCCcEEEEE
Q psy7108          61 STGMVSASWD----KTVKLWNAVETDTQHETIQLLSD--ALCVAYKPDGTEIVVATLD-----GQLIMFDVESAAQVGSV  129 (703)
Q Consensus        61 g~~L~sgs~D----g~V~iWd~~~~~~~~~~~~~~~~--V~~v~~spdg~~las~s~d-----g~I~vwd~~~~~~~~~~  129 (703)
                      +.+++.|+.+    ..+..+|..+.. -........+  -.+++ .-+++.++.|+.+     ..+.+||..+.+-... 
T Consensus        16 ~~i~v~GG~~~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~-   92 (302)
T 2xn4_A           16 KLMVVVGGQAPKAIRSVECYDFKEER-WHQVAELPSRRCRAGMV-YMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSV-   92 (302)
T ss_dssp             EEEEEECCBSSSBCCCEEEEETTTTE-EEEECCCSSCCBSCEEE-EETTEEEEESCBCSSSBCCCEEEEETTTTEEEEE-
T ss_pred             CEEEEECCCCCCCCCcEEEEcCcCCc-EeEcccCCcccccceEE-EECCEEEEEeCcCCCccccceEEECCCCCceeeC-
Confidence            4556666543    357788887663 2222111111  11222 2266777777754     3588899887653322 


Q ss_pred             eccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCC-----cEEEEECCCCceEEEEEeccCCccccccc
Q psy7108         130 EARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSK-----YICIYSSREGILLKKFTITQNKSLDGIND  204 (703)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg-----~I~lwD~~~~~~~~~~~~~~~~~~~~~~~  204 (703)
                      ....   ..              ......+.+  +++.++.|+.++     .+.+||+.+.+-...-..+..  ...   
T Consensus        93 ~~~p---~~--------------r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~--r~~---  148 (302)
T 2xn4_A           93 ANMR---DR--------------RSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTR--RSS---  148 (302)
T ss_dssp             CCCS---SC--------------CBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSC--CBS---
T ss_pred             CCCC---cc--------------ccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCc--ccC---
Confidence            1100   00              001122222  566777776553     588899887754432111111  111   


Q ss_pred             cceeeeeccCCCEEEEEcccCCCC-CeeEEECCCCCCCccc--eeecCCccceEEEEEcCCCCEEEEEeCC-----C-EE
Q psy7108         205 FINRRKMTEFGNVSLIETRETHEG-GNVVLKLPGVKKGDMA--ARVLKPEVRVFCVKFSPTGQAWVAATTE-----G-VH  275 (703)
Q Consensus       205 ~v~~~~~spdg~~l~~~~~~~~~~-~~~~i~iwd~~~~~~~--~~~~~h~~~V~~l~~spdg~~l~s~s~D-----g-v~  275 (703)
                        .+ +..-+++.+++++..+... ....+..||..+.+-.  ............+.+  +++.++.|+.+     . +.
T Consensus       149 --~~-~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~  223 (302)
T 2xn4_A          149 --VG-VGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVE  223 (302)
T ss_dssp             --CE-EEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEE
T ss_pred             --ce-EEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEE
Confidence              11 1223566666665433210 1235777887765322  111111122222222  56666777653     2 77


Q ss_pred             EEEcCCCc
Q psy7108         276 IYSLDSGY  283 (703)
Q Consensus       276 iwd~~~~~  283 (703)
                      +||..+.+
T Consensus       224 ~yd~~~~~  231 (302)
T 2xn4_A          224 VYDPTTNA  231 (302)
T ss_dssp             EEETTTTE
T ss_pred             EEeCCCCC
Confidence            88887654

>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A

Probab=91.49  E-value=18  Score=43.95  Aligned_cols=74  Identities=14%  Similarity=0.224  Sum_probs=47.1

Q ss_pred             EEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCC-CcEEEEEecc
Q psy7108          54 EFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVES-AAQVGSVEAR  132 (703)
Q Consensus        54 ~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~-~~~~~~~~~~  132 (703)
                      -.+|  ..+.+|--. ..+++|+|+++..+..... ...+|.-=.|-.+. .|+..+ +..|+.|++.. ..+...+..|
T Consensus        72 IMnP--~~~iiALra-g~~lQiFnl~~k~klks~~-~~e~VvfWkWis~~-~l~lVT-~~aVyHW~~~~~s~P~k~fdR~  145 (1630)
T 1xi4_A           72 IMNP--ASKVIALKA-GKTLQIFNIEMKSKMKAHT-MTDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRH  145 (1630)
T ss_pred             ccCC--CcceEEEec-CCeEEEeehHHhhhhcccc-cCCCceEEEecCCC-eeEEEc-CCeEEEeccCCCCccHHHHhcc
Confidence            4577  667666654 5789999998876554433 45567777776444 344432 56899999964 3444444444


Q ss_pred             c
Q psy7108         133 R  133 (703)
Q Consensus       133 ~  133 (703)
                      .
T Consensus       146 ~  146 (1630)
T 1xi4_A          146 S  146 (1630)
T ss_pred             h
Confidence            3

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=91.40  E-value=3.3  Score=41.60  Aligned_cols=182  Identities=14%  Similarity=0.154  Sum_probs=86.2

Q ss_pred             cEEEEEcCCCceeEEEecC-CCcEEEEEEecCCCEEEEEEC----CC-------eEEEEEcCCCcEEEEEeccccCCCCC
Q psy7108          72 TVKLWNAVETDTQHETIQL-LSDALCVAYKPDGTEIVVATL----DG-------QLIMFDVESAAQVGSVEARRDLDSGR  139 (703)
Q Consensus        72 ~V~iWd~~~~~~~~~~~~~-~~~V~~v~~spdg~~las~s~----dg-------~I~vwd~~~~~~~~~~~~~~~~~~~~  139 (703)
                      .+..||..+++-....... .......+...++..++.|+.    ++       .+.+||..+.+-... ..   .... 
T Consensus        25 ~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~-~~---~p~~-   99 (318)
T 2woz_A           25 AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGL-PP---LPSA-   99 (318)
T ss_dssp             EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEEC-SC---BSSC-
T ss_pred             ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEEC-CC---CCcc-
Confidence            3788898777533221111 122223334557788888873    11       177788876654221 10   0000 


Q ss_pred             CCCccchhhcccCCccEEEEEEcCCCCEEEEEecC-------CcEEEEECCCCceEEEEEeccCCccccccccceeeeec
Q psy7108         140 LDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS-------KYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMT  212 (703)
Q Consensus       140 ~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d-------g~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  212 (703)
                               .    .....+.+  +++.++.|+.+       ..+.+||+.+.+-...-..+..  ..+      ..+..
T Consensus       100 ---------r----~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~--r~~------~~~~~  156 (318)
T 2woz_A          100 ---------R----CLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIK--VYG------HNVIS  156 (318)
T ss_dssp             ---------B----CSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSC--EES------CEEEE
T ss_pred             ---------c----cccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCc--ccc------cEEEE
Confidence                     0    01122222  56677777653       3588899987754432111111  111      11222


Q ss_pred             cCCCEEEEEcccCCCCCeeEEECCCCCCCcc--ceeecCCccceEEEEEcCCCCEEEEEeCCC------EEEEEcCCCc
Q psy7108         213 EFGNVSLIETRETHEGGNVVLKLPGVKKGDM--AARVLKPEVRVFCVKFSPTGQAWVAATTEG------VHIYSLDSGY  283 (703)
Q Consensus       213 pdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~--~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg------v~iwd~~~~~  283 (703)
                      .+++.+++++..+.......+.+||..+.+-  +............+.+  +++.++.|+.++      +.+||..+.+
T Consensus       157 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~  233 (318)
T 2woz_A          157 HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNK  233 (318)
T ss_dssp             ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred             ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCe
Confidence            4666666665432222224577888776532  2111111111222222  566667776432      5678876653

>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}

Probab=91.36  E-value=13  Score=37.23  Aligned_cols=127  Identities=10%  Similarity=0.038  Sum_probs=76.8

Q ss_pred             EEEcCCCCCCEEEEEe--CCCcEEEE--EcCCCceeEEEecCCCcEEEEEEecCCCEEEEEEC-CCeEEEEEcCCCcEEE
Q psy7108          53 IEFSPVLSSTGMVSAS--WDKTVKLW--NAVETDTQHETIQLLSDALCVAYKPDGTEIVVATL-DGQLIMFDVESAAQVG  127 (703)
Q Consensus        53 l~~sp~~dg~~L~sgs--~Dg~V~iW--d~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~-dg~I~vwd~~~~~~~~  127 (703)
                      ..|++  +++.|+-..  .++.-.|+  ++... ....+..+..    .+++++++.|+..+. ..+|.+.+++.+....
T Consensus       109 ~~~s~--~g~~Iy~~~~~~~~~~~Iy~~~~dGs-~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~  181 (302)
T 3s25_A          109 IYASL--IGNYIYYLHYDTQTATSLYRIRIDGE-EKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEAL  181 (302)
T ss_dssp             EEEEE--ETTEEEEEEESSSSCEEEEEEETTSC-CCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEE
T ss_pred             cEEEE--eCCEEEEEeecCCCCceEEEEECCCC-CeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEE
Confidence            36788  888888776  34444444  54433 3344444433    457888999887765 5789998987766544


Q ss_pred             EEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC--CcEEEEECCCCceEEEEEeccCCcccccccc
Q psy7108         128 SVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS--KYICIYSSREGILLKKFTITQNKSLDGINDF  205 (703)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d--g~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~  205 (703)
                      .+.+                       ... ..++|++.+|+-...+  ..|..-++..... ..+.  .        ..
T Consensus       182 l~~~-----------------------~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~-~~Lt--~--------~~  226 (302)
T 3s25_A          182 FYDC-----------------------NCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNP-VVLT--E--------AN  226 (302)
T ss_dssp             EECS-----------------------CEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCC-EECS--C--------SC
T ss_pred             EeCC-----------------------Ccc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCe-EEEe--C--------CC
Confidence            4332                       122 2356999988876543  3577777765442 2221  0        11


Q ss_pred             ceeeeeccCCCEEEEEcc
Q psy7108         206 INRRKMTEFGNVSLIETR  223 (703)
Q Consensus       206 v~~~~~spdg~~l~~~~~  223 (703)
                      +  ..++|+++.++.+..
T Consensus       227 ~--~~~~~~g~~Iy~~~~  242 (302)
T 3s25_A          227 I--EHYNVYGSLIFYQRG  242 (302)
T ss_dssp             E--EEEEEETTEEEEEEC
T ss_pred             c--ceEEECCCEEEEEEC
Confidence            2  348889998887643

>1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A

Probab=91.31  E-value=0.092  Score=48.22  Aligned_cols=53  Identities=23%  Similarity=0.197  Sum_probs=38.9

Q ss_pred             HHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccccc
Q psy7108         614 TATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFL  667 (703)
Q Consensus       614 pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~  667 (703)
                      .+.+..+++..+..+++++|||+|+.+++.++.... ...+++.+++++|....
T Consensus        56 ~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~~~~~~-~~~~v~~~v~~~~~~~~  108 (181)
T 1isp_A           56 SRFVQKVLDETGAKKVDIVAHSMGGANTLYYIKNLD-GGNKVANVVTLGGANRL  108 (181)
T ss_dssp             HHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHSS-GGGTEEEEEEESCCGGG
T ss_pred             HHHHHHHHHHcCCCeEEEEEECccHHHHHHHHHhcC-CCceEEEEEEEcCcccc
Confidence            345555566666678999999999999988877641 12468889999987654

>3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A

Probab=91.30  E-value=0.06  Score=53.61  Aligned_cols=45  Identities=11%  Similarity=0.053  Sum_probs=35.0

Q ss_pred             HHHHhhCCCCc-eEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccc
Q psy7108         618 DYILNQTGHNS-LITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  665 (703)
Q Consensus       618 ~~i~~~t~~~~-~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~  665 (703)
                      ..++...+..+ ++++|||+|+.+++.++..+|+   +++.+++++|..
T Consensus        87 ~~~l~~l~~~~p~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~  132 (301)
T 3kda_A           87 HKLARQFSPDRPFDLVAHDIGIWNTYPMVVKNQA---DIARLVYMEAPI  132 (301)
T ss_dssp             HHHHHHHCSSSCEEEEEETHHHHTTHHHHHHCGG---GEEEEEEESSCC
T ss_pred             HHHHHHcCCCccEEEEEeCccHHHHHHHHHhChh---hccEEEEEccCC
Confidence            33344446667 9999999999999998888775   588888888753

>2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36

Probab=91.27  E-value=0.11  Score=50.67  Aligned_cols=52  Identities=19%  Similarity=0.144  Sum_probs=43.1

Q ss_pred             cchHHHHHHHHhhCCC-CceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccc
Q psy7108         611 YDTTATIDYILNQTGH-NSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF  666 (703)
Q Consensus       611 ~d~pa~i~~i~~~t~~-~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~  666 (703)
                      -|+.+.++++...... .+++++|||+|+.+++.++..+|+    ++.+++++|...
T Consensus       105 ~d~~~~i~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~----v~~~v~~~~~~~  157 (249)
T 2i3d_A          105 SDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRPE----IEGFMSIAPQPN  157 (249)
T ss_dssp             HHHHHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCTT----EEEEEEESCCTT
T ss_pred             HHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcCCC----ccEEEEEcCchh
Confidence            6788999999876543 479999999999999998888776    778888888764

>4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A

Probab=91.25  E-value=0.028  Score=55.18  Aligned_cols=74  Identities=14%  Similarity=0.159  Sum_probs=0.0

Q ss_pred             chhhhhhcccccccceeecccCccccccCcccCcCCccceeeeecccchhhhhhhhcCCcccccccccccCCCCCCcCCC
Q psy7108         415 PPTLFARMRTRGYDIWLWNARGNVYSREHVNLTSEQNKFYRFSCDFNVYTLELISRLGPLRIKPKVEKMETGSSDEESSK  494 (703)
Q Consensus       415 l~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  494 (703)
                      +..+++    +||.|+..|.||...|........                                              
T Consensus        44 ~~~l~~----~g~~v~~~d~~G~G~s~~~~~~~~----------------------------------------------   73 (279)
T 4g9e_A           44 LEGEIG----KKWRVIAPDLPGHGKSTDAIDPDR----------------------------------------------   73 (279)
T ss_dssp             HHSHHH----HHEEEEEECCTTSTTSCCCSCHHH----------------------------------------------
T ss_pred             HhHHHh----cCCeEEeecCCCCCCCCCCCCccc----------------------------------------------


Q ss_pred             cccceeecccCcCCCCCCccccccCchhhhhcccCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCch
Q psy7108         495 DDETEIRVLDEDVPRSSDTGDIQLKSTRMNELGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPE  568 (703)
Q Consensus       495 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~  568 (703)
                                                    ...+.|..+.+..++..-+..++.++|||+||..++.++.+.|+
T Consensus        74 ------------------------------~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~  117 (279)
T 4g9e_A           74 ------------------------------SYSMEGYADAMTEVMQQLGIADAVVFGWSLGGHIGIEMIARYPE  117 (279)
T ss_dssp             ------------------------------HSSHHHHHHHHHHHHHHHTCCCCEEEEETHHHHHHHHHTTTCTT
T ss_pred             ------------------------------CCCHHHHHHHHHHHHHHhCCCceEEEEECchHHHHHHHHhhCCc

>1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21

Probab=91.22  E-value=0.046  Score=63.07  Aligned_cols=53  Identities=23%  Similarity=0.226  Sum_probs=37.8

Q ss_pred             cCCchhhHHHhHcc---------------C-CCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108         528 LYDTTATIDYILNQ---------------T-GHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  583 (703)
Q Consensus       528 ~~d~~~~~~~i~~~---------------~-~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~  583 (703)
                      ..|..++++|+...               + ...+++++|||+||++++.++++.|+   .++..+..+|+.
T Consensus       307 ~~D~~a~IdwL~~~~~~~~d~~~~~~v~q~~~~grVgl~G~SyGG~ial~~Aa~~p~---~lkaiV~~~~~~  375 (763)
T 1lns_A          307 IYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYLGTMAYGAATTGVE---GLELILAEAGIS  375 (763)
T ss_dssp             HHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETHHHHHHHHHHTTTCT---TEEEEEEESCCS
T ss_pred             HHHHHHHHHHHhhcccccccccccccccccCCCCcEEEEEECHHHHHHHHHHHhCCc---ccEEEEEecccc
Confidence            35778899999843               1 12589999999999988887776553   355666665543

>3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp}

Probab=91.15  E-value=0.016  Score=56.73  Aligned_cols=52  Identities=19%  Similarity=0.159  Sum_probs=39.7

Q ss_pred             ccCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108         527 GLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  583 (703)
Q Consensus       527 g~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~  583 (703)
                      .+.|+.++++++.+.-+..++.++|||+||..++..+.+     .+++..+..+|..
T Consensus        78 ~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~-----~~v~~~v~~~~~~  129 (275)
T 3h04_A           78 IIEDVYASFDAIQSQYSNCPIFTFGRSSGAYLSLLIARD-----RDIDGVIDFYGYS  129 (275)
T ss_dssp             HHHHHHHHHHHHHHTTTTSCEEEEEETHHHHHHHHHHHH-----SCCSEEEEESCCS
T ss_pred             hHHHHHHHHHHHHhhCCCCCEEEEEecHHHHHHHHHhcc-----CCccEEEeccccc
Confidence            456778899999988777899999999999877765543     5566666666654

>2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa}

Probab=91.14  E-value=0.016  Score=60.07  Aligned_cols=86  Identities=15%  Similarity=0.113  Sum_probs=0.0

Q ss_pred             chhhhhhcccccccceeecccCccccccCcccCcCCccceeeeecccchhhhhhhhcCCcccccccccccCCCCCCcCCC
Q psy7108         415 PPTLFARMRTRGYDIWLWNARGNVYSREHVNLTSEQNKFYRFSCDFNVYTLELISRLGPLRIKPKVEKMETGSSDEESSK  494 (703)
Q Consensus       415 l~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  494 (703)
                      ++-.+++   +||.|...|.||...|..+..         .|..-                                   
T Consensus       116 ~~~~l~~---~G~~v~~~d~~g~g~s~~~~~---------~~~~~-----------------------------------  148 (367)
T 2hdw_A          116 YAQTMAE---RGFVTLAFDPSYTGESGGQPR---------NVASP-----------------------------------  148 (367)
T ss_dssp             HHHHHHH---TTCEEEEECCTTSTTSCCSSS---------SCCCH-----------------------------------
T ss_pred             HHHHHHH---CCCEEEEECCCCcCCCCCcCc---------cccch-----------------------------------


Q ss_pred             cccceeecccCcCCCCCCccccccCchhhhhcccCCchhhHHHhHccC--CCcceEEEEEecCceeeeeccCCCchhhhh
Q psy7108         495 DDETEIRVLDEDVPRSSDTGDIQLKSTRMNELGLYDTTATIDYILNQT--GHNSLITLGHSLGTTNVLIAGSLRPEYQTK  572 (703)
Q Consensus       495 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~~~~~~i~~~~--~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~  572 (703)
                                                    .....|+.++++|+....  +..+++++|||+||..++....+.|    +
T Consensus       149 ------------------------------~~~~~d~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p----~  194 (367)
T 2hdw_A          149 ------------------------------DINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDK----R  194 (367)
T ss_dssp             ------------------------------HHHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT----T
T ss_pred             ------------------------------hhHHHHHHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCC----C


Q ss_pred             HHHhhhhhh
Q psy7108         573 VRLNVLWAQ  581 (703)
Q Consensus       573 ~~~~~~~~p  581 (703)
                      ++..+..+|
T Consensus       195 ~~~~v~~~p  203 (367)
T 2hdw_A          195 VKAVVTSTM  203 (367)
T ss_dssp             CCEEEEESC
T ss_pred             ccEEEEecc

>1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16

Probab=91.00  E-value=0.015  Score=57.33  Aligned_cols=50  Identities=20%  Similarity=0.325  Sum_probs=34.1

Q ss_pred             CchhhHHHhHc------cCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108         530 DTTATIDYILN------QTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  583 (703)
Q Consensus       530 d~~~~~~~i~~------~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~  583 (703)
                      |+.++++|+..      .-+..++.++|||+||+.++....+.|+    ++..+.++|..
T Consensus       102 d~~~~~~~l~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~----v~~~v~~~p~~  157 (262)
T 1jfr_A          102 QLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTS----LKAAIPLTGWN  157 (262)
T ss_dssp             HHHHHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCTT----CSEEEEESCCC
T ss_pred             HHHHHHHHHHhccccccccCcccEEEEEEChhHHHHHHHHhcCcc----ceEEEeecccC
Confidence            44567788776      2234689999999999887776655544    56666666643

>3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis}

Probab=90.99  E-value=0.015  Score=57.01  Aligned_cols=51  Identities=25%  Similarity=0.182  Sum_probs=34.5

Q ss_pred             CCchhhHHHhHccCCCcceEEEEEecCceeeeeccCC---CchhhhhHHHhhhhhhhh
Q psy7108         529 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSL---RPEYQTKVRLNVLWAQSA  583 (703)
Q Consensus       529 ~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~---~~~~~~~~~~~~~~~p~~  583 (703)
                      .|+.+.++++.    ..++.++|||+||..++....+   .|+...+++..+..+|..
T Consensus        94 ~d~~~~~~~l~----~~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~il~~~~~  147 (270)
T 3llc_A           94 EEALAVLDHFK----PEKAILVGSSMGGWIALRLIQELKARHDNPTQVSGMVLIAPAP  147 (270)
T ss_dssp             HHHHHHHHHHC----CSEEEEEEETHHHHHHHHHHHHHHTCSCCSCEEEEEEEESCCT
T ss_pred             HHHHHHHHHhc----cCCeEEEEeChHHHHHHHHHHHHHhccccccccceeEEecCcc
Confidence            35555555553    5689999999999888776665   442225677777776654

>3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis}

Probab=90.96  E-value=0.04  Score=58.36  Aligned_cols=38  Identities=21%  Similarity=0.478  Sum_probs=30.2

Q ss_pred             ccCCchhhHHHhHccCC--CcceEEEEEecCceeeeeccC
Q psy7108         527 GLYDTTATIDYILNQTG--HNSLITLGHSLGTTNVLIAGS  564 (703)
Q Consensus       527 g~~d~~~~~~~i~~~~~--~~~~~~~g~S~G~~~~~~~~~  564 (703)
                      ...|..++++|+...+.  ..+++++|||+||+.++++.+
T Consensus       210 ~~~D~~~ald~l~~~~~vd~~rI~v~G~S~GG~~a~~~aa  249 (398)
T 3nuz_A          210 ASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGTEPMMVLGT  249 (398)
T ss_dssp             HHHHHHHHHHHHTTCSSEEEEEEEEEEEGGGHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCCCeEEEEEECHhHHHHHHHHh
Confidence            34688889999987764  468999999999988766544

>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV}

Probab=90.93  E-value=0.015  Score=53.10  Aligned_cols=48  Identities=17%  Similarity=0.151  Sum_probs=34.3

Q ss_pred             hhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhhh
Q psy7108         532 TATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF  584 (703)
Q Consensus       532 ~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~  584 (703)
                      .+.++++.......++.++|||+||..++....+.|     ++..+..+|...
T Consensus        61 ~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-----~~~~v~~~~~~~  108 (176)
T 2qjw_A           61 QRLLEIARAATEKGPVVLAGSSLGSYIAAQVSLQVP-----TRALFLMVPPTK  108 (176)
T ss_dssp             HHHHHHHHHHHTTSCEEEEEETHHHHHHHHHHTTSC-----CSEEEEESCCSC
T ss_pred             HHHHHHHHhcCCCCCEEEEEECHHHHHHHHHHHhcC-----hhheEEECCcCC
Confidence            445566665544579999999999988877776655     666666666543

>3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A

Probab=90.90  E-value=0.051  Score=60.80  Aligned_cols=52  Identities=17%  Similarity=0.050  Sum_probs=37.2

Q ss_pred             cCCchhhHHHhHccCC-CcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhh
Q psy7108         528 LYDTTATIDYILNQTG-HNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS  582 (703)
Q Consensus       528 ~~d~~~~~~~i~~~~~-~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~  582 (703)
                      ..|..++++|+.+.+. ..+++++|||+||++++.++.+.+.   .++..+..+|.
T Consensus        91 ~~D~~~~i~~l~~~~~~~~~v~l~G~S~GG~~a~~~a~~~~~---~l~a~v~~~~~  143 (587)
T 3i2k_A           91 EADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVG---GLKAIAPSMAS  143 (587)
T ss_dssp             HHHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCT---TEEEBCEESCC
T ss_pred             hHHHHHHHHHHHhCCCCCCeEEEEeeCHHHHHHHHHHhhCCC---ccEEEEEeCCc
Confidence            4677889999987653 3589999999999888776665432   34555555443

>2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14

Probab=90.86  E-value=0.11  Score=49.32  Aligned_cols=53  Identities=13%  Similarity=0.061  Sum_probs=40.3

Q ss_pred             chHHHHHHHHhhC--CCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccccc
Q psy7108         612 DTTATIDYILNQT--GHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFL  667 (703)
Q Consensus       612 d~pa~i~~i~~~t--~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~  667 (703)
                      ++.+.++++....  ...++.++|||+|+..++.++..+|+   +++.+++++|....
T Consensus       102 ~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~---~~~~~v~~~~~~~~  156 (226)
T 2h1i_A          102 ELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYEN---ALKGAVLHHPMVPR  156 (226)
T ss_dssp             HHHHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTT---SCSEEEEESCCCSC
T ss_pred             HHHHHHHHHHhhcCCCcccEEEEEEChHHHHHHHHHHhChh---hhCEEEEeCCCCCc
Confidence            3455666666666  44789999999999999988887664   57788888887644

>3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482}

Probab=90.78  E-value=0.037  Score=58.54  Aligned_cols=49  Identities=20%  Similarity=0.347  Sum_probs=34.8

Q ss_pred             cCCchhhHHHhHccCC--CcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhh
Q psy7108         528 LYDTTATIDYILNQTG--HNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWA  580 (703)
Q Consensus       528 ~~d~~~~~~~i~~~~~--~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~  580 (703)
                      ..|+.++++|+.+.+.  ..+++++|||+||+.++.+.+.    ..+++..++.+
T Consensus       206 ~~D~~~a~d~l~~~~~vd~~rI~v~G~S~GG~~al~~a~~----~~~i~a~v~~~  256 (391)
T 3g8y_A          206 SYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEPMMVLGVL----DKDIYAFVYND  256 (391)
T ss_dssp             HHHHHHHHHHHHTCTTEEEEEEEEEEEGGGHHHHHHHHHH----CTTCCEEEEES
T ss_pred             HHHHHHHHHHHHhccCCCCCeEEEEEEChhHHHHHHHHHc----CCceeEEEEcc
Confidence            3688889999998764  4689999999999877665442    23455544433

>2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2

Probab=90.68  E-value=0.038  Score=54.26  Aligned_cols=56  Identities=13%  Similarity=0.062  Sum_probs=40.2

Q ss_pred             cCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCc---hhhhhHHHhhhhhhhhh
Q psy7108         528 LYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRP---EYQTKVRLNVLWAQSAF  584 (703)
Q Consensus       528 ~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~  584 (703)
                      ..|+.++++|+..... .++.++|||+||..++....+..   ....+++..+..+|...
T Consensus       113 ~~d~~~~~~~l~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~~~  171 (262)
T 2pbl_A          113 TQQISQAVTAAAKEID-GPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSD  171 (262)
T ss_dssp             HHHHHHHHHHHHHHSC-SCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCC
T ss_pred             HHHHHHHHHHHHHhcc-CCEEEEEECHHHHHHHHHhccccccccccccceEEEEecCccC
Confidence            5677888999987655 79999999999988777665431   11346777777777543

>1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A*

Probab=90.66  E-value=0.023  Score=58.32  Aligned_cols=106  Identities=12%  Similarity=0.020  Sum_probs=0.0

Q ss_pred             CCcccchhhhhhcccccccceeecccCccccc--cCccc------CcCCccceeeeecccchhhhhhhhcCCcccccccc
Q psy7108         410 DTKFLPPTLFARMRTRGYDIWLWNARGNVYSR--EHVNL------TSEQNKFYRFSCDFNVYTLELISRLGPLRIKPKVE  481 (703)
Q Consensus       410 ~~~~sl~~~la~~~~~~~~~~~~~~~~~~~~~--~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  481 (703)
                      +.......+++    +||.|...|.||...|.  ....-      ......|+...++                      
T Consensus       109 ~~~~~~~~l~~----~G~~v~~~d~rG~g~s~~~~~~~~~p~~~~~~~~~~~~~~g~~----------------------  162 (337)
T 1vlq_A          109 GFPHDWLFWPS----MGYICFVMDTRGQGSGWLKGDTPDYPEGPVDPQYPGFMTRGIL----------------------  162 (337)
T ss_dssp             CCGGGGCHHHH----TTCEEEEECCTTCCCSSSCCCCCBCCSSSBCCCCSSSTTTTTT----------------------
T ss_pred             CCchhhcchhh----CCCEEEEecCCCCCCcccCCCCcccccccCCCCCCcccccCCC----------------------


Q ss_pred             cccCCCCCCcCCCcccceeecccCcCCCCCCccccccCchhhhhcccCCchhhHHHhHccC--CCcceEEEEEecCceee
Q psy7108         482 KMETGSSDEESSKDDETEIRVLDEDVPRSSDTGDIQLKSTRMNELGLYDTTATIDYILNQT--GHNSLITLGHSLGTTNV  559 (703)
Q Consensus       482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~~~~~~i~~~~--~~~~~~~~g~S~G~~~~  559 (703)
                                                          ..........+.|+.++++|+.+..  +.++++++|||+||..+
T Consensus       163 ------------------------------------~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~la  206 (337)
T 1vlq_A          163 ------------------------------------DPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIA  206 (337)
T ss_dssp             ------------------------------------CTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHH
T ss_pred             ------------------------------------CHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCHHHHHH


Q ss_pred             eeccCCCchhhhhHHHhhhhhh
Q psy7108         560 LIAGSLRPEYQTKVRLNVLWAQ  581 (703)
Q Consensus       560 ~~~~~~~~~~~~~~~~~~~~~p  581 (703)
                      +.++.+.|    +++..+...|
T Consensus       207 ~~~a~~~p----~v~~~vl~~p  224 (337)
T 1vlq_A          207 LAVSALSK----KAKALLCDVP  224 (337)
T ss_dssp             HHHHHHCS----SCCEEEEESC
T ss_pred             HHHHhcCC----CccEEEECCC

>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A

Probab=90.57  E-value=0.081  Score=50.81  Aligned_cols=53  Identities=15%  Similarity=0.071  Sum_probs=43.6

Q ss_pred             cchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccccC
Q psy7108         611 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLG  668 (703)
Q Consensus       611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~~  668 (703)
                      .|+.+.++++...  ..+++++|||+|+.+++.++..+|+   .++.+++++|+....
T Consensus        79 ~d~~~~i~~l~~~--~~~~~l~G~S~Gg~~a~~~a~~~p~---~~~~~i~~~p~~~~~  131 (251)
T 3dkr_A           79 AESSAAVAHMTAK--YAKVFVFGLSLGGIFAMKALETLPG---ITAGGVFSSPILPGK  131 (251)
T ss_dssp             HHHHHHHHHHHTT--CSEEEEEESHHHHHHHHHHHHHCSS---CCEEEESSCCCCTTC
T ss_pred             HHHHHHHHHHHHh--cCCeEEEEechHHHHHHHHHHhCcc---ceeeEEEecchhhcc
Confidence            5777889988877  5689999999999999999888776   567788888887643

>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A

Probab=90.54  E-value=27  Score=39.66  Aligned_cols=201  Identities=14%  Similarity=0.181  Sum_probs=112.7

Q ss_pred             CcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEE
Q psy7108          47 EGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQV  126 (703)
Q Consensus        47 ~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~  126 (703)
                      ...|.++.-..  ++ .|-.|+.+| +..+|..+..-..........|.++.. .+| .|..++.+ -+..+|..+++..
T Consensus        62 ~~~i~~i~~d~--~g-~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~  134 (758)
T 3ott_A           62 NTRIYCGVIID--NT-YLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLT  134 (758)
T ss_dssp             SSCEEEEEEET--TT-EEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEE
T ss_pred             CceEEEEEEcC--CC-cEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEE
Confidence            35688888776  55 455555555 678897665321100112335777654 355 45556655 6888998766543


Q ss_pred             EEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccc
Q psy7108         127 GSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFI  206 (703)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v  206 (703)
                       .+....               .......|.++....+|...+ ++.+ -+..+|..+++.. .+........  ....|
T Consensus       135 -~~~~~~---------------~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~-~~~~~~~~~~--~~~~i  193 (758)
T 3ott_A          135 -SFDTRR---------------NGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFE-GIPLPVHSSQ--SNLFV  193 (758)
T ss_dssp             -EECHHH---------------HCCSCSCEEEEEECTTCCEEE-EETT-EEEEEETTTTEEE-EECCCCCTTC--SSCCE
T ss_pred             -EeccCC---------------CCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceE-EecCCCcccc--cccee
Confidence             221110               001123688888888887665 4444 4888898776432 2221111000  11246


Q ss_pred             eeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCCEEEEEcCCCc
Q psy7108         207 NRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYSLDSGY  283 (703)
Q Consensus       207 ~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dgv~iwd~~~~~  283 (703)
                      .++...+++..+.+++..       -+..+|..+++......-....|.++...++|...+. +.+|+.+++..++.
T Consensus       194 ~~i~~d~~~~~lWigt~~-------Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWig-T~~Gl~~~~~~~~~  262 (758)
T 3ott_A          194 NSLLEDTTRQCVWIGTEG-------YLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAG-TDNGLYVYHNDTTP  262 (758)
T ss_dssp             EEEEEETTTTEEEEEEEE-------EEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEE-ETTEEEEECCTTSC
T ss_pred             EEEEEECCCCEEEEEECC-------CCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEE-eCCceeEEecCCCc
Confidence            777777777765665533       2666776655432211112345888888888876554 45678888876643

>2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40

Probab=90.49  E-value=0.026  Score=58.68  Aligned_cols=48  Identities=19%  Similarity=0.123  Sum_probs=31.6

Q ss_pred             hhhHHHhHccCCCcceE-EEEEecCceeeeeccCCCchhhhhHHHhhhhhhh
Q psy7108         532 TATIDYILNQTGHNSLI-TLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS  582 (703)
Q Consensus       532 ~~~~~~i~~~~~~~~~~-~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~  582 (703)
                      .+.+..++..-+..++. ++|||+||..++..+.+.|+   +++.++..+|.
T Consensus       140 ~~~l~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~  188 (377)
T 2b61_A          140 VKVQKALLEHLGISHLKAIIGGSFGGMQANQWAIDYPD---FMDNIVNLCSS  188 (377)
T ss_dssp             HHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHSTT---SEEEEEEESCC
T ss_pred             HHHHHHHHHHcCCcceeEEEEEChhHHHHHHHHHHCch---hhheeEEeccC
Confidence            33444455544557887 99999999988776665544   45666666554

>1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16

Probab=90.46  E-value=0.091  Score=51.57  Aligned_cols=52  Identities=19%  Similarity=0.287  Sum_probs=41.2

Q ss_pred             cchHHHHHHHHh------hCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccc
Q psy7108         611 YDTTATIDYILN------QTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF  666 (703)
Q Consensus       611 ~d~pa~i~~i~~------~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~  666 (703)
                      .|+.+.++++..      ..+..+++++|||+|+.+++.++..+|+    ++.+++++|...
T Consensus       101 ~d~~~~~~~l~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~----v~~~v~~~p~~~  158 (262)
T 1jfr_A          101 RQLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTS----LKAAIPLTGWNT  158 (262)
T ss_dssp             HHHHHHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCTT----CSEEEEESCCCS
T ss_pred             HHHHHHHHHHHhccccccccCcccEEEEEEChhHHHHHHHHhcCcc----ceEEEeecccCc
Confidence            366778888876      3345689999999999999998888776    678888888754

>3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified}

Probab=90.40  E-value=0.048  Score=54.38  Aligned_cols=37  Identities=16%  Similarity=0.294  Sum_probs=25.7

Q ss_pred             CCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhh
Q psy7108         543 GHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS  582 (703)
Q Consensus       543 ~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~  582 (703)
                      +..++.++|||+||..++....+.|+   +++.++..+|.
T Consensus        94 ~~~~~~lvGhS~Gg~~a~~~a~~~p~---~v~~lvl~~~~  130 (309)
T 3u1t_A           94 GLDDMVLVIHDWGSVIGMRHARLNPD---RVAAVAFMEAL  130 (309)
T ss_dssp             TCCSEEEEEEEHHHHHHHHHHHHCTT---TEEEEEEEEES
T ss_pred             CCCceEEEEeCcHHHHHHHHHHhChH---hheEEEEeccC
Confidence            45789999999999887766654443   45555555543

>3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A

Probab=89.75  E-value=0.053  Score=53.92  Aligned_cols=38  Identities=16%  Similarity=0.114  Sum_probs=28.1

Q ss_pred             CCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108         543 GHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  583 (703)
Q Consensus       543 ~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~  583 (703)
                      +..++.++|||+||..++....+.|   ++++.++..+|..
T Consensus        94 ~~~~~~lvG~S~Gg~ia~~~a~~~p---~~v~~lvl~~~~~  131 (304)
T 3b12_A           94 GFERFHLVGHARGGRTGHRMALDHP---DSVLSLAVLDIIP  131 (304)
Confidence            3468999999999998887766554   3577777766653

>1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A*

Probab=90.25  E-value=0.073  Score=53.74  Aligned_cols=41  Identities=27%  Similarity=0.350  Sum_probs=27.2

Q ss_pred             HhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhh
Q psy7108         537 YILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWA  580 (703)
Q Consensus       537 ~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~  580 (703)
                      .++..-+.+++.++|||+||..++....+.|+   +++.++..+
T Consensus        97 ~l~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~  137 (317)
T 1wm1_A           97 RLREMAGVEQWLVFGGSWGSTLALAYAQTHPE---RVSEMVLRG  137 (317)
T ss_dssp             HHHHHTTCSSEEEEEETHHHHHHHHHHHHCGG---GEEEEEEES
T ss_pred             HHHHHcCCCcEEEEEeCHHHHHHHHHHHHCCh---heeeeeEec
Confidence            34444456789999999999987766665554   455555443

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=90.23  E-value=1.8  Score=43.39  Aligned_cols=191  Identities=8%  Similarity=-0.010  Sum_probs=91.7

Q ss_pred             CCCEEEEEeCC----CcEEEEEcCCCceeEEEecCC--CcEEEEEEecCCCEEEEEEC----C-----CeEEEEEcCCCc
Q psy7108          60 SSTGMVSASWD----KTVKLWNAVETDTQHETIQLL--SDALCVAYKPDGTEIVVATL----D-----GQLIMFDVESAA  124 (703)
Q Consensus        60 dg~~L~sgs~D----g~V~iWd~~~~~~~~~~~~~~--~~V~~v~~spdg~~las~s~----d-----g~I~vwd~~~~~  124 (703)
                      ++.+++.|+.+    ..+.++|..+..- .......  ..-.+++ ..+++.++.|+.    +     ..+.+||..+.+
T Consensus        24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~  101 (308)
T 1zgk_A           24 GRLIYTAGGYFRQSLSYLEAYNPSNGTW-LRLADLQVPRSGLAGC-VVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ  101 (308)
T ss_dssp             CCCEEEECCBSSSBCCCEEEEETTTTEE-EECCCCSSCCBSCEEE-EETTEEEEECCEEEETTEEEECCCEEEEETTTTE
T ss_pred             CCEEEEEeCcCCCCcceEEEEcCCCCeE-eECCCCCcccccceEE-EECCEEEEECCCcCCCCCCeecceEEEECCCCCe
Confidence            45677777642    3578888876632 1111111  1111222 225667777665    2     358888887765


Q ss_pred             EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC-----CcEEEEECCCCceEEEEEeccCCcc
Q psy7108         125 QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS-----KYICIYSSREGILLKKFTITQNKSL  199 (703)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d-----g~I~lwD~~~~~~~~~~~~~~~~~~  199 (703)
                      -... .   .....              ......+.+  +++.++.|+.+     ..+.+||+.+.+-...-..+..  .
T Consensus       102 W~~~-~---~~p~~--------------r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~--r  159 (308)
T 1zgk_A          102 WSPC-A---PMSVP--------------RNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTR--R  159 (308)
T ss_dssp             EEEC-C---CCSSC--------------CBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSC--C
T ss_pred             EeEC-C---CCCcC--------------ccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCcc--c
Confidence            3221 1   00000              011222223  56666766543     4688999987754322111111  1


Q ss_pred             ccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcc--ceeecCCccceEEEEEcCCCCEEEEEeCC-----
Q psy7108         200 DGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDM--AARVLKPEVRVFCVKFSPTGQAWVAATTE-----  272 (703)
Q Consensus       200 ~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~--~~~~~~h~~~V~~l~~spdg~~l~s~s~D-----  272 (703)
                      .+     .+++ .-+++.+++++.++. .....+..||..+.+-  +............+.+  +++.++.|+.+     
T Consensus       160 ~~-----~~~~-~~~~~iyv~GG~~~~-~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~  230 (308)
T 1zgk_A          160 IG-----VGVA-VLNRLLYAVGGFDGT-NRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQL  230 (308)
T ss_dssp             BS-----CEEE-EETTEEEEECCBCSS-CBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBC
T ss_pred             cc-----eEEE-EECCEEEEEeCCCCC-CcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCcc
Confidence            11     1111 225666666654432 2134577788766532  2111111222222333  56666777653     


Q ss_pred             C-EEEEEcCCCc
Q psy7108         273 G-VHIYSLDSGY  283 (703)
Q Consensus       273 g-v~iwd~~~~~  283 (703)
                      . +.+||..+.+
T Consensus       231 ~~v~~yd~~~~~  242 (308)
T 1zgk_A          231 NSVERYDVETET  242 (308)
T ss_dssp             CCEEEEETTTTE
T ss_pred             ceEEEEeCCCCc
Confidence            2 7889887654

>3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis}

Probab=90.23  E-value=0.33  Score=47.08  Aligned_cols=49  Identities=18%  Similarity=0.100  Sum_probs=38.9

Q ss_pred             HHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccc
Q psy7108         615 ATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF  666 (703)
Q Consensus       615 a~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~  666 (703)
                      +.+..+++..+.++++++|||+|+.+++.++..+|+   +++.+++++|...
T Consensus        79 ~~~~~~~~~l~~~~~~lvG~S~Gg~~a~~~a~~~p~---~v~~~vl~~~~~~  127 (278)
T 3oos_A           79 KDLEAIREALYINKWGFAGHSAGGMLALVYATEAQE---SLTKIIVGGAAAS  127 (278)
T ss_dssp             HHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHHGG---GEEEEEEESCCSB
T ss_pred             HHHHHHHHHhCCCeEEEEeecccHHHHHHHHHhCch---hhCeEEEecCccc
Confidence            344445556677789999999999999998887664   5888999998876

>1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18

Probab=90.18  E-value=0.12  Score=51.91  Aligned_cols=49  Identities=16%  Similarity=0.307  Sum_probs=38.3

Q ss_pred             hHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccc
Q psy7108         613 TTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS  664 (703)
Q Consensus       613 ~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~  664 (703)
                      +.+.+..++...+..++++||||+|+.++..++...|+   +|+.++.++|.
T Consensus        60 ~~~~i~~~~~~~~~~~v~lvGhS~GG~~a~~~a~~~p~---~v~~lv~i~~p  108 (285)
T 1ex9_A           60 LLQQVEEIVALSGQPKVNLIGHSHGGPTIRYVAAVRPD---LIASATSVGAP  108 (285)
T ss_dssp             HHHHHHHHHHHHCCSCEEEEEETTHHHHHHHHHHHCGG---GEEEEEEESCC
T ss_pred             HHHHHHHHHHHhCCCCEEEEEECHhHHHHHHHHHhChh---heeEEEEECCC
Confidence            34555666666677789999999999999988887665   67888888873

>1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus}

Probab=90.08  E-value=0.097  Score=56.35  Aligned_cols=52  Identities=21%  Similarity=0.210  Sum_probs=42.3

Q ss_pred             cchHHHHHHHHhhCC--CCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccc
Q psy7108         611 YDTTATIDYILNQTG--HNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  665 (703)
Q Consensus       611 ~d~pa~i~~i~~~t~--~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~  665 (703)
                      -|+-++++++.+..+  .+++++||||+|+.++..++...|+   +|+.++++.|+.
T Consensus       128 ~dl~~~i~~L~~~~g~~~~~i~LvGhSlGg~vA~~~a~~~p~---~v~~iv~ldpa~  181 (452)
T 1w52_X          128 AETAYLIQQLLTELSYNPENVHIIGHSLGAHTAGEAGRRLEG---RVGRVTGLDPAE  181 (452)
T ss_dssp             HHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTT---CSSEEEEESCBC
T ss_pred             HHHHHHHHHHHHhcCCCcccEEEEEeCHHHHHHHHHHHhccc---ceeeEEeccccc
Confidence            367778888876655  6789999999999999888877664   588899998875

>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}

Probab=90.03  E-value=0.25  Score=48.08  Aligned_cols=55  Identities=24%  Similarity=0.336  Sum_probs=42.2

Q ss_pred             HHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccccCCCC
Q psy7108         614 TATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLGNLV  671 (703)
Q Consensus       614 pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~~~~~  671 (703)
                      -+.+..++...+..+++++|||+|+.+++.++..+|+   +++.+++++|........
T Consensus        82 ~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~lvl~~~~~~~~~~~  136 (286)
T 3qit_A           82 LAQIDRVIQELPDQPLLLVGHSMGAMLATAIASVRPK---KIKELILVELPLPAEESK  136 (286)
T ss_dssp             HHHHHHHHHHSCSSCEEEEEETHHHHHHHHHHHHCGG---GEEEEEEESCCCCCCC--
T ss_pred             HHHHHHHHHhcCCCCEEEEEeCHHHHHHHHHHHhChh---hccEEEEecCCCCCcccc
Confidence            3455556666677889999999999999999988765   588899999887655443

>3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728}

Probab=90.00  E-value=0.16  Score=47.27  Aligned_cols=50  Identities=20%  Similarity=0.205  Sum_probs=38.9

Q ss_pred             hHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccc
Q psy7108         613 TTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  665 (703)
Q Consensus       613 ~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~  665 (703)
                      +-+.+..+++..+..++.++|||+|+.+++.++...|+   +++.+++++|..
T Consensus        86 ~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~---~~~~~v~~~~~~  135 (207)
T 3bdi_A           86 AAEFIRDYLKANGVARSVIMGASMGGGMVIMTTLQYPD---IVDGIIAVAPAW  135 (207)
T ss_dssp             HHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGG---GEEEEEEESCCS
T ss_pred             HHHHHHHHHHHcCCCceEEEEECccHHHHHHHHHhCch---hheEEEEeCCcc
Confidence            33455666666777899999999999999988887664   577888888763

>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}

Probab=89.99  E-value=0.058  Score=51.84  Aligned_cols=80  Identities=15%  Similarity=0.107  Sum_probs=0.0

Q ss_pred             chhhhhhcccccccceeecccCccccccCcc--------cCcCCccceeeeecccchhhhhhhhcCCcccccccccccCC
Q psy7108         415 PPTLFARMRTRGYDIWLWNARGNVYSREHVN--------LTSEQNKFYRFSCDFNVYTLELISRLGPLRIKPKVEKMETG  486 (703)
Q Consensus       415 l~~~la~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  486 (703)
                      ++-.++.   +||.|...|.||..-+.....        +......                                  
T Consensus        51 ~~~~l~~---~G~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~~~----------------------------------   93 (241)
T 3f67_A           51 LCRRLAQ---EGYLAIAPELYFRQGDPNEYHDIPTLFKELVSKVPD----------------------------------   93 (241)
T ss_dssp             HHHHHHH---TTCEEEEECTTTTTCCGGGCCSHHHHHHHTGGGSCH----------------------------------
T ss_pred             HHHHHHH---CCcEEEEecccccCCCCCchhhHHHHHHHhhhcCCc----------------------------------


Q ss_pred             CCCCcCCCcccceeecccCcCCCCCCccccccCchhhhhcccCCchhhHHHhHccCC-CcceEEEEEecCceeeeeccCC
Q psy7108         487 SSDEESSKDDETEIRVLDEDVPRSSDTGDIQLKSTRMNELGLYDTTATIDYILNQTG-HNSLITLGHSLGTTNVLIAGSL  565 (703)
Q Consensus       487 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~~~~~~i~~~~~-~~~~~~~g~S~G~~~~~~~~~~  565 (703)
                                                            +....|+.++++|+..... ..+++++|||+||..++....+
T Consensus        94 --------------------------------------~~~~~d~~~~~~~l~~~~~d~~~i~l~G~S~Gg~~a~~~a~~  135 (241)
T 3f67_A           94 --------------------------------------AQVLADLDHVASWAARHGGDAHRLLITGFCWGGRITWLYAAH  135 (241)
T ss_dssp             --------------------------------------HHHHHHHHHHHHHHHTTTEEEEEEEEEEETHHHHHHHHHHTT
T ss_pred             --------------------------------------hhhHHHHHHHHHHHHhccCCCCeEEEEEEcccHHHHHHHHhh


Q ss_pred             Cchh
Q psy7108         566 RPEY  569 (703)
Q Consensus       566 ~~~~  569 (703)
                      .|.+
T Consensus       136 ~~~~  139 (241)
T 3f67_A          136 NPQL  139 (241)
T ss_dssp             CTTC
T ss_pred             CcCc

>2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2}

Probab=89.99  E-value=0.15  Score=52.41  Aligned_cols=59  Identities=17%  Similarity=0.205  Sum_probs=46.6

Q ss_pred             eeeeeeeecchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCC-chHHHHHHHheeccccc
Q psy7108         603 LNIFQVGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLR-PEYQTKVRLNVLWAQSA  665 (703)
Q Consensus       603 ~s~~e~~~~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~-~~~~~~i~~~~~l~p~~  665 (703)
                      +++++++ -|+.+.++++....+..+++++|||+|+.+++.++..+ |   +.++.++++++..
T Consensus       121 ~~~~~~~-~d~~~~~~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~p---~~v~~lvl~~~~~  180 (354)
T 2rau_A          121 WGWSTWI-SDIKEVVSFIKRDSGQERIYLAGESFGGIAALNYSSLYWK---NDIKGLILLDGGP  180 (354)
T ss_dssp             CSHHHHH-HHHHHHHHHHHHHHCCSSEEEEEETHHHHHHHHHHHHHHH---HHEEEEEEESCSC
T ss_pred             CcHHHHH-HHHHHHHHHHHHhcCCceEEEEEECHhHHHHHHHHHhcCc---cccceEEEecccc
Confidence            4455555 48899999988877778899999999999998888764 4   4788888886544

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*

Probab=89.91  E-value=0.058  Score=59.19  Aligned_cols=37  Identities=24%  Similarity=0.348  Sum_probs=25.8

Q ss_pred             CCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhh
Q psy7108         543 GHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS  582 (703)
Q Consensus       543 ~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~  582 (703)
                      +..++.++|||+||..++..+.+.|+   +++..+..+|+
T Consensus       325 ~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~  361 (555)
T 3i28_A          325 GLSQAVFIGHDWGGMLVWYMALFYPE---RVRAVASLNTP  361 (555)
T ss_dssp             TCSCEEEEEETHHHHHHHHHHHHCGG---GEEEEEEESCC
T ss_pred             CCCcEEEEEecHHHHHHHHHHHhChH---heeEEEEEccC
Confidence            45689999999999888776665543   45555555443

>2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14

Probab=89.91  E-value=0.13  Score=49.88  Aligned_cols=54  Identities=19%  Similarity=0.054  Sum_probs=42.1

Q ss_pred             cchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccccc
Q psy7108         611 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFL  667 (703)
Q Consensus       611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~  667 (703)
                      .|+.+.++++.+..+..++.++|||+|+.+++.++..+|+   +++.+++++|....
T Consensus       125 ~~~~~~l~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~---~v~~~v~~~~~~~~  178 (251)
T 2r8b_A          125 GKMADFIKANREHYQAGPVIGLGFSNGANILANVLIEQPE---LFDAAVLMHPLIPF  178 (251)
T ss_dssp             HHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSTT---TCSEEEEESCCCCS
T ss_pred             HHHHHHHHHHHhccCCCcEEEEEECHHHHHHHHHHHhCCc---ccCeEEEEecCCCc
Confidence            4556677777665567789999999999999988877665   57888888887644

>3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica}

Probab=89.69  E-value=0.053  Score=53.15  Aligned_cols=43  Identities=19%  Similarity=0.166  Sum_probs=29.6

Q ss_pred             hHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108         538 ILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  583 (703)
Q Consensus       538 i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~  583 (703)
                      +++.-+..++.++|||+||..++....+   +.++++.++..+|..
T Consensus        91 ~~~~~~~~~~~lvG~S~Gg~~a~~~a~~---~p~~v~~lvl~~~~~  133 (282)
T 3qvm_A           91 ILVALDLVNVSIIGHSVSSIIAGIASTH---VGDRISDITMICPSP  133 (282)
T ss_dssp             HHHHTTCCSEEEEEETHHHHHHHHHHHH---HGGGEEEEEEESCCS
T ss_pred             HHHHcCCCceEEEEecccHHHHHHHHHh---CchhhheEEEecCcc
Confidence            3333355789999999999877765543   344677777777654

>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*

Probab=89.68  E-value=0.13  Score=49.23  Aligned_cols=51  Identities=24%  Similarity=0.180  Sum_probs=40.4

Q ss_pred             ecchHHHHHHHHhhCC-CCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccc
Q psy7108         610 LYDTTATIDYILNQTG-HNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  665 (703)
Q Consensus       610 ~~d~pa~i~~i~~~t~-~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~  665 (703)
                      .-|+.+.++++....+ ..++.++|||+|+.+++.++...|     ++..+.+.|..
T Consensus        97 ~~d~~~~~~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~-----~~~~v~~~~~~  148 (236)
T 1zi8_A           97 VGDLEAAIRYARHQPYSNGKVGLVGYSLGGALAFLVASKGY-----VDRAVGYYGVG  148 (236)
T ss_dssp             HHHHHHHHHHHTSSTTEEEEEEEEEETHHHHHHHHHHHHTC-----SSEEEEESCSS
T ss_pred             hHHHHHHHHHHHhccCCCCCEEEEEECcCHHHHHHHhccCC-----ccEEEEecCcc
Confidence            3678899999887654 468999999999999999888777     66666666654

>3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A

Probab=89.63  E-value=0.061  Score=53.40  Aligned_cols=66  Identities=14%  Similarity=0.054  Sum_probs=0.0

Q ss_pred             cccccceeecccCccccccCcccCcCCccceeeeecccchhhhhhhhcCCcccccccccccCCCCCCcCCCcccceeecc
Q psy7108         424 TRGYDIWLWNARGNVYSREHVNLTSEQNKFYRFSCDFNVYTLELISRLGPLRIKPKVEKMETGSSDEESSKDDETEIRVL  503 (703)
Q Consensus       424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  503 (703)
                      .+||.|+..|.||...|.....                                                          
T Consensus        56 ~~~~~v~~~d~~G~G~s~~~~~----------------------------------------------------------   77 (299)
T 3g9x_A           56 APSHRCIAPDLIGMGKSDKPDL----------------------------------------------------------   77 (299)
T ss_dssp             TTTSCEEEECCTTSTTSCCCCC----------------------------------------------------------
T ss_pred             ccCCEEEeeCCCCCCCCCCCCC----------------------------------------------------------


Q ss_pred             cCcCCCCCCccccccCchhhhhcccCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCch
Q psy7108         504 DEDVPRSSDTGDIQLKSTRMNELGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPE  568 (703)
Q Consensus       504 ~~~~~~~~~~~~~~~~~~~~~~~g~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~  568 (703)
                                           ...+.+..+.+..++..-+..++.++|||+||..++..+.+.|+
T Consensus        78 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~  121 (299)
T 3g9x_A           78 ---------------------DYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPE  121 (299)
T ss_dssp             ---------------------CCCHHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHHHHHSGG
T ss_pred             ---------------------cccHHHHHHHHHHHHHHhCCCcEEEEEeCccHHHHHHHHHhcch

>1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7

Probab=89.61  E-value=0.066  Score=53.97  Aligned_cols=40  Identities=25%  Similarity=0.309  Sum_probs=26.6

Q ss_pred             hHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhh
Q psy7108         538 ILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWA  580 (703)
Q Consensus       538 i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~  580 (703)
                      ++..-+..++.++|||+||..++....+.|+   +++.++..+
T Consensus        95 l~~~l~~~~~~lvGhSmGg~ia~~~a~~~p~---~v~~lvl~~  134 (313)
T 1azw_A           95 LRTHLGVDRWQVFGGSWGSTLALAYAQTHPQ---QVTELVLRG  134 (313)
T ss_dssp             HHHHTTCSSEEEEEETHHHHHHHHHHHHCGG---GEEEEEEES
T ss_pred             HHHHhCCCceEEEEECHHHHHHHHHHHhChh---heeEEEEec
Confidence            3444456789999999999987776665553   444444443

>1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14

Probab=89.52  E-value=0.2  Score=47.63  Aligned_cols=52  Identities=21%  Similarity=0.095  Sum_probs=39.4

Q ss_pred             cchHHHHHHHHhhCCC--CceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccc
Q psy7108         611 YDTTATIDYILNQTGH--NSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF  666 (703)
Q Consensus       611 ~d~pa~i~~i~~~t~~--~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~  666 (703)
                      -|+.+.++++.+ .+.  .+++++|||+|+.+++.++..+|+   +++.+++++|...
T Consensus        96 ~~~~~~i~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~---~v~~~i~~~~~~~  149 (232)
T 1fj2_A           96 ENIKALIDQEVK-NGIPSNRIILGGFSQGGALSLYTALTTQQ---KLAGVTALSCWLP  149 (232)
T ss_dssp             HHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHTTCSS---CCSEEEEESCCCT
T ss_pred             HHHHHHHHHHhc-CCCCcCCEEEEEECHHHHHHHHHHHhCCC---ceeEEEEeecCCC
Confidence            345667777655 443  689999999999999999888765   4677888887653

>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23

Probab=89.48  E-value=0.14  Score=47.98  Aligned_cols=43  Identities=12%  Similarity=-0.038  Sum_probs=28.3

Q ss_pred             HhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhh
Q psy7108         537 YILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS  582 (703)
Q Consensus       537 ~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~  582 (703)
                      .++..-+..++.++|||+||..++....+.|   ++++..+..+|.
T Consensus        95 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~---~~v~~~v~~~~~  137 (210)
T 1imj_A           95 AVVDALELGPPVVISPSLSGMYSLPFLTAPG---SQLPGFVPVAPI  137 (210)
T ss_dssp             HHHHHHTCCSCEEEEEGGGHHHHHHHHTSTT---CCCSEEEEESCS
T ss_pred             HHHHHhCCCCeEEEEECchHHHHHHHHHhCc---cccceEEEeCCC
Confidence            3333334578999999999988776555443   346666666654

>2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A*

Probab=89.47  E-value=0.13  Score=55.04  Aligned_cols=50  Identities=26%  Similarity=0.230  Sum_probs=39.1

Q ss_pred             HHHHHHHhhCCCCc-eEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccccc
Q psy7108         615 ATIDYILNQTGHNS-LITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFL  667 (703)
Q Consensus       615 a~i~~i~~~t~~~~-~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~  667 (703)
                      +.+..++...+.++ +++||||+|+++++.++..+|+   +|+.+++++|....
T Consensus       187 ~dl~~ll~~l~~~~~~~lvGhSmGG~ial~~A~~~p~---~v~~lVli~~~~~~  237 (444)
T 2vat_A          187 RIHRQVLDRLGVRQIAAVVGASMGGMHTLEWAFFGPE---YVRKIVPIATSCRQ  237 (444)
T ss_dssp             HHHHHHHHHHTCCCEEEEEEETHHHHHHHHHGGGCTT---TBCCEEEESCCSBC
T ss_pred             HHHHHHHHhcCCccceEEEEECHHHHHHHHHHHhChH---hhheEEEEeccccC
Confidence            44445555566677 8999999999999999988776   57888888887653

>2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus}

Probab=89.46  E-value=0.17  Score=49.75  Aligned_cols=43  Identities=19%  Similarity=0.104  Sum_probs=34.7

Q ss_pred             HhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccc
Q psy7108         621 LNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF  666 (703)
Q Consensus       621 ~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~  666 (703)
                      ++.-+.++++++|||+|+.+++.++..+|+   +|+.+++++|...
T Consensus        77 l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~---~v~~lvl~~~~~~  119 (269)
T 2xmz_A           77 LDKYKDKSITLFGYSMGGRVALYYAINGHI---PISNLILESTSPG  119 (269)
T ss_dssp             HGGGTTSEEEEEEETHHHHHHHHHHHHCSS---CCSEEEEESCCSC
T ss_pred             HHHcCCCcEEEEEECchHHHHHHHHHhCch---heeeeEEEcCCcc
Confidence            444466789999999999999999988776   5788888887543

>3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043}

Probab=89.44  E-value=0.18  Score=46.58  Aligned_cols=46  Identities=20%  Similarity=0.162  Sum_probs=35.0

Q ss_pred             HHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccccc
Q psy7108         618 DYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFL  667 (703)
Q Consensus       618 ~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~  667 (703)
                      ..+++..+ .+++++|||+|+.+++.++..+|+   +++.+++++|....
T Consensus        66 ~~~~~~~~-~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~lvl~~~~~~~  111 (191)
T 3bdv_A           66 RRELSVCT-QPVILIGHSFGALAACHVVQQGQE---GIAGVMLVAPAEPM  111 (191)
T ss_dssp             HHHHHTCS-SCEEEEEETHHHHHHHHHHHTTCS---SEEEEEEESCCCGG
T ss_pred             HHHHHhcC-CCeEEEEEChHHHHHHHHHHhcCC---CccEEEEECCCccc
Confidence            33344445 789999999999999999888664   57788888886543

>3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1}

Probab=89.37  E-value=0.025  Score=56.45  Aligned_cols=85  Identities=13%  Similarity=0.077  Sum_probs=0.0

Q ss_pred             hhhhhhcccccccceeecccCcccc--ccCcccCcCCccceeeeecccchhhhhhhhcCCcccccccccccCCCCCCcCC
Q psy7108         416 PTLFARMRTRGYDIWLWNARGNVYS--REHVNLTSEQNKFYRFSCDFNVYTLELISRLGPLRIKPKVEKMETGSSDEESS  493 (703)
Q Consensus       416 ~~~la~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  493 (703)
                      ..++..+.++||.|...|.||...+  ..                                                   
T Consensus        70 ~~~~~~l~~~G~~v~~~d~~g~~~~~~~~---------------------------------------------------   98 (283)
T 3bjr_A           70 ESLAMAFAGHGYQAFYLEYTLLTDQQPLG---------------------------------------------------   98 (283)
T ss_dssp             HHHHHHHHTTTCEEEEEECCCTTTCSSCB---------------------------------------------------
T ss_pred             HHHHHHHHhCCcEEEEEeccCCCccccCc---------------------------------------------------


Q ss_pred             CcccceeecccCcCCCCCCccccccCchhhhhcccCCchhhHHHhHc-----cCCCcceEEEEEecCceeeeeccCCCch
Q psy7108         494 KDDETEIRVLDEDVPRSSDTGDIQLKSTRMNELGLYDTTATIDYILN-----QTGHNSLITLGHSLGTTNVLIAGSLRPE  568 (703)
Q Consensus       494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~~~~~~i~~-----~~~~~~~~~~g~S~G~~~~~~~~~~~~~  568 (703)
                                                     .....|+.++++|+.+     .-..++++++|||+||..++..+.+.++
T Consensus        99 -------------------------------~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~  147 (283)
T 3bjr_A           99 -------------------------------LAPVLDLGRAVNLLRQHAAEWHIDPQQITPAGFSVGGHIVALYNDYWAT  147 (283)
T ss_dssp             -------------------------------THHHHHHHHHHHHHHHSHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTT
T ss_pred             -------------------------------hhHHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHHHHHHHHHHhhccc


Q ss_pred             h----------hhhHHHhhhhhhh
Q psy7108         569 Y----------QTKVRLNVLWAQS  582 (703)
Q Consensus       569 ~----------~~~~~~~~~~~p~  582 (703)
                      .          ..+++..+..+|.
T Consensus       148 ~~~~~~~~~~~~~~~~~~v~~~p~  171 (283)
T 3bjr_A          148 RVATELNVTPAMLKPNNVVLGYPV  171 (283)
T ss_dssp             HHHHHHTCCHHHHCCSSEEEESCC
T ss_pred             cchhhcCCCcCCCCccEEEEcCCc

>1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A*

Probab=89.37  E-value=0.18  Score=50.80  Aligned_cols=46  Identities=26%  Similarity=0.327  Sum_probs=35.4

Q ss_pred             HHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccc
Q psy7108         616 TIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS  664 (703)
Q Consensus       616 ~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~  664 (703)
                      .+..++...+.+++++||||+|+.+++.++..+|+   +|+.+|+++|.
T Consensus        94 dl~~l~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~  139 (317)
T 1wm1_A           94 DIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPE---RVSEMVLRGIF  139 (317)
T ss_dssp             HHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGG---GEEEEEEESCC
T ss_pred             HHHHHHHHcCCCcEEEEEeCHHHHHHHHHHHHCCh---heeeeeEeccC
Confidence            34445556677789999999999999999888775   56777777654

>1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A*

Probab=89.37  E-value=0.13  Score=55.32  Aligned_cols=52  Identities=19%  Similarity=0.174  Sum_probs=42.1

Q ss_pred             cchHHHHHHHHhhCC--CCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccc
Q psy7108         611 YDTTATIDYILNQTG--HNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  665 (703)
Q Consensus       611 ~d~pa~i~~i~~~t~--~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~  665 (703)
                      -|+-++++++.+..+  .+++++||||+|+.++..++...|+   +|+.++++.|+.
T Consensus       128 ~dl~~li~~L~~~~g~~~~~i~LvGhSlGg~vA~~~a~~~p~---~v~~iv~ldpa~  181 (452)
T 1bu8_A          128 AEIAFLVQVLSTEMGYSPENVHLIGHSLGAHVVGEAGRRLEG---HVGRITGLDPAE  181 (452)
T ss_dssp             HHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTT---CSSEEEEESCBC
T ss_pred             HHHHHHHHHHHHhcCCCccceEEEEEChhHHHHHHHHHhccc---ccceEEEecCCc
Confidence            367778888876555  3789999999999999988887664   588899998875

>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A

Probab=89.31  E-value=0.021  Score=56.45  Aligned_cols=43  Identities=23%  Similarity=0.187  Sum_probs=32.0

Q ss_pred             cccCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCch
Q psy7108         526 LGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPE  568 (703)
Q Consensus       526 ~g~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~  568 (703)
                      ..+.|..++++++.......+++++|+|+||+.++......|.
T Consensus       129 ~~~~d~~a~l~~l~~~~d~~rv~~~G~S~GG~~a~~~a~~~pr  171 (259)
T 4ao6_A          129 AVIADWAAALDFIEAEEGPRPTGWWGLSMGTMMGLPVTASDKR  171 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCCEEEEECTHHHHHHHHHHHHCTT
T ss_pred             HHHHHHHHHHHHhhhccCCceEEEEeechhHHHHHHHHhcCCc
Confidence            3345677788888776677899999999999877665554443

>3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum}

Probab=89.30  E-value=0.056  Score=51.75  Aligned_cols=36  Identities=28%  Similarity=0.270  Sum_probs=27.9

Q ss_pred             ceEEEEEecCceeeeeccCC-CchhhhhHHHhhhhhhhhhc
Q psy7108         546 SLITLGHSLGTTNVLIAGSL-RPEYQTKVRLNVLWAQSAFL  585 (703)
Q Consensus       546 ~~~~~g~S~G~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~  585 (703)
                      ++.++|||+||..++....+ .|+    ++..+..+|....
T Consensus        85 ~~~l~G~S~Gg~~a~~~a~~~~p~----v~~lvl~~~~~~~  121 (245)
T 3e0x_A           85 NITLIGYSMGGAIVLGVALKKLPN----VRKVVSLSGGARF  121 (245)
T ss_dssp             CEEEEEETHHHHHHHHHHTTTCTT----EEEEEEESCCSBC
T ss_pred             ceEEEEeChhHHHHHHHHHHhCcc----ccEEEEecCCCcc
Confidence            99999999999988877776 665    6677777765444

>1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B*

Probab=89.28  E-value=0.062  Score=54.06  Aligned_cols=77  Identities=18%  Similarity=0.226  Sum_probs=0.0

Q ss_pred             hhhcccccccceeecccCccccccC-------------cccCcCCccceeeeecccchhhhhhhhcCCcccccccccccC
Q psy7108         419 FARMRTRGYDIWLWNARGNVYSREH-------------VNLTSEQNKFYRFSCDFNVYTLELISRLGPLRIKPKVEKMET  485 (703)
Q Consensus       419 la~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  485 (703)
                      ++.   +||.|...|.||...+...             ..+.....-++                               
T Consensus       105 l~~---~g~~v~~~d~rg~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------  150 (318)
T 1l7a_A          105 WAL---HGYATFGMLVRGQQRSEDTSISPHGHALGWMTKGILDKDTYYY-------------------------------  150 (318)
T ss_dssp             HHH---TTCEEEEECCTTTSSSCCCCCCSSCCSSSSTTTTTTCTTTCHH-------------------------------
T ss_pred             hhh---CCcEEEEecCCCCCCCCCcccccCCccccceeccCCCHHHHHH-------------------------------


Q ss_pred             CCCCCcCCCcccceeecccCcCCCCCCccccccCchhhhhcccCCchhhHHHhHccCCC--cceEEEEEecCceeeeecc
Q psy7108         486 GSSDEESSKDDETEIRVLDEDVPRSSDTGDIQLKSTRMNELGLYDTTATIDYILNQTGH--NSLITLGHSLGTTNVLIAG  563 (703)
Q Consensus       486 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~~~~~~i~~~~~~--~~~~~~g~S~G~~~~~~~~  563 (703)
                                                             .....|+.++++|+.+..+.  ++++++|||+||..++...
T Consensus       151 ---------------------------------------~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a  191 (318)
T 1l7a_A          151 ---------------------------------------RGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAA  191 (318)
T ss_dssp             ---------------------------------------HHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHH
T ss_pred             ---------------------------------------HHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHHHHh


Q ss_pred             CCCch
Q psy7108         564 SLRPE  568 (703)
Q Consensus       564 ~~~~~  568 (703)
                      .+.|.
T Consensus       192 ~~~~~  196 (318)
T 1l7a_A          192 ALSDI  196 (318)
T ss_dssp             HHCSC
T ss_pred             ccCCC

>2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40

Probab=89.24  E-value=0.033  Score=57.62  Aligned_cols=46  Identities=20%  Similarity=0.256  Sum_probs=30.0

Q ss_pred             HHHhHccCCCcce-EEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108         535 IDYILNQTGHNSL-ITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  583 (703)
Q Consensus       535 ~~~i~~~~~~~~~-~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~  583 (703)
                      +..++..-+.+++ .++|||+||..++....+.|+   +++.++..+|..
T Consensus       134 l~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~  180 (366)
T 2pl5_A          134 QKLLVESLGIEKLFCVAGGSMGGMQALEWSIAYPN---SLSNCIVMASTA  180 (366)
T ss_dssp             HHHHHHHTTCSSEEEEEEETHHHHHHHHHHHHSTT---SEEEEEEESCCS
T ss_pred             HHHHHHHcCCceEEEEEEeCccHHHHHHHHHhCcH---hhhheeEeccCc
Confidence            3444444455788 799999999887766654443   566666666543

>3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti}

Probab=89.19  E-value=0.049  Score=54.95  Aligned_cols=37  Identities=32%  Similarity=0.411  Sum_probs=26.4

Q ss_pred             CCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhh
Q psy7108         543 GHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS  582 (703)
Q Consensus       543 ~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~  582 (703)
                      +..++.++|||+||..++.+..+.|+   +++..+..+|.
T Consensus       132 ~~~~v~lvG~S~Gg~ia~~~a~~~p~---~v~~lvl~~~~  168 (314)
T 3kxp_A          132 ARGHAILVGHSLGARNSVTAAAKYPD---LVRSVVAIDFT  168 (314)
T ss_dssp             TSSCEEEEEETHHHHHHHHHHHHCGG---GEEEEEEESCC
T ss_pred             CCCCcEEEEECchHHHHHHHHHhChh---heeEEEEeCCC
Confidence            45789999999999988776665443   55655655553

>3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp}

Probab=89.12  E-value=0.087  Score=52.04  Aligned_cols=78  Identities=17%  Similarity=0.111  Sum_probs=0.0

Q ss_pred             CCcccchhhhhhcccccccceeecccCccccccCcccCcCCccceeeeecccchhhhhhhhcCCcccccccccccCCCCC
Q psy7108         410 DTKFLPPTLFARMRTRGYDIWLWNARGNVYSREHVNLTSEQNKFYRFSCDFNVYTLELISRLGPLRIKPKVEKMETGSSD  489 (703)
Q Consensus       410 ~~~~sl~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  489 (703)
                      +.......+...+.++||.|...|.||...|.      ....-                                     
T Consensus        57 ~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~------~~~~~-------------------------------------   93 (276)
T 3hxk_A           57 ISQRESDPLALAFLAQGYQVLLLNYTVMNKGT------NYNFL-------------------------------------   93 (276)
T ss_dssp             CCGGGSHHHHHHHHHTTCEEEEEECCCTTSCC------CSCTH-------------------------------------
T ss_pred             CCchhhHHHHHHHHHCCCEEEEecCccCCCcC------CCCcC-------------------------------------


Q ss_pred             CcCCCcccceeecccCcCCCCCCccccccCchhhhhcccCCchhhHHHhHcc-----CCCcceEEEEEecCceeeeeccC
Q psy7108         490 EESSKDDETEIRVLDEDVPRSSDTGDIQLKSTRMNELGLYDTTATIDYILNQ-----TGHNSLITLGHSLGTTNVLIAGS  564 (703)
Q Consensus       490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~~~~~~i~~~-----~~~~~~~~~g~S~G~~~~~~~~~  564 (703)
                                                         ...+.|+.++++|+...     -...+++++|||+||..++..+.
T Consensus        94 -----------------------------------~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~  138 (276)
T 3hxk_A           94 -----------------------------------SQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGN  138 (276)
T ss_dssp             -----------------------------------HHHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSS
T ss_pred             -----------------------------------chHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHh


Q ss_pred             C
Q psy7108         565 L  565 (703)
Q Consensus       565 ~  565 (703)
                      +
T Consensus       139 ~  139 (276)
T 3hxk_A          139 S  139 (276)
T ss_dssp             S
T ss_pred             h

>1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12

Probab=89.09  E-value=0.14  Score=50.29  Aligned_cols=40  Identities=15%  Similarity=0.175  Sum_probs=30.1

Q ss_pred             hCCCCceEEEEeChhHHHHHHHhcCC-chHHHHHHHheeccccc
Q psy7108         623 QTGHNSLITLGHSLGTTNVLIAGSLR-PEYQTKVRLNVLWAQSA  665 (703)
Q Consensus       623 ~t~~~~~~~vg~s~g~~~~~~~~s~~-~~~~~~i~~~~~l~p~~  665 (703)
                      .-+.++++++|||+|+.++..++..+ |+   +|+.+++++|+.
T Consensus        82 ~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~---~v~~lvl~~~~~  122 (274)
T 1a8q_A           82 DLDLRDVTLVAHSMGGGELARYVGRHGTG---RLRSAVLLSAIP  122 (274)
T ss_dssp             HTTCCSEEEEEETTHHHHHHHHHHHHCST---TEEEEEEESCCC
T ss_pred             HcCCCceEEEEeCccHHHHHHHHHHhhhH---heeeeeEecCCC
Confidence            34556899999999999988766653 43   578888888653

>3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A

Probab=88.99  E-value=0.083  Score=52.52  Aligned_cols=43  Identities=16%  Similarity=0.135  Sum_probs=28.5

Q ss_pred             HHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhh
Q psy7108         536 DYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQ  581 (703)
Q Consensus       536 ~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p  581 (703)
                      ..++..-+.+++.++|||+||..++....+.|   ++++.++..+|
T Consensus        95 ~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~  137 (306)
T 3r40_A           95 IEAMEQLGHVHFALAGHNRGARVSYRLALDSP---GRLSKLAVLDI  137 (306)
T ss_dssp             HHHHHHTTCSSEEEEEETHHHHHHHHHHHHCG---GGEEEEEEESC
T ss_pred             HHHHHHhCCCCEEEEEecchHHHHHHHHHhCh---hhccEEEEecC
Confidence            33344445578999999999988777665544   35555555554

>3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba}

Probab=88.96  E-value=0.024  Score=57.52  Aligned_cols=79  Identities=20%  Similarity=0.351  Sum_probs=0.0

Q ss_pred             hhhhhhcccccccceeecccCccccccCcccCcCCccceeeeecccchhhhhhhhcCCcccccccccccCCCCCCcCCCc
Q psy7108         416 PTLFARMRTRGYDIWLWNARGNVYSREHVNLTSEQNKFYRFSCDFNVYTLELISRLGPLRIKPKVEKMETGSSDEESSKD  495 (703)
Q Consensus       416 ~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  495 (703)
                      ..+...+.++||.|...|.||...+.                                                      
T Consensus       113 ~~~~~~la~~G~~vv~~d~~g~g~s~------------------------------------------------------  138 (306)
T 3vis_A          113 AWLGERIASHGFVVIAIDTNTTLDQP------------------------------------------------------  138 (306)
T ss_dssp             HHHHHHHHTTTEEEEEECCSSTTCCH------------------------------------------------------
T ss_pred             HHHHHHHHhCCCEEEEecCCCCCCCc------------------------------------------------------


Q ss_pred             ccceeecccCcCCCCCCccccccCchhhhhcccCCchhhHHHhHcc--------CCCcceEEEEEecCceeeeeccCCCc
Q psy7108         496 DETEIRVLDEDVPRSSDTGDIQLKSTRMNELGLYDTTATIDYILNQ--------TGHNSLITLGHSLGTTNVLIAGSLRP  567 (703)
Q Consensus       496 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~~~~~~i~~~--------~~~~~~~~~g~S~G~~~~~~~~~~~~  567 (703)
                                                   .....|+.++++|+...        .+..+++++|||+||..++....+.|
T Consensus       139 -----------------------------~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~v~l~G~S~GG~~a~~~a~~~p  189 (306)
T 3vis_A          139 -----------------------------DSRARQLNAALDYMLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRP  189 (306)
T ss_dssp             -----------------------------HHHHHHHHHHHHHHHHTSCHHHHTTEEEEEEEEEEETHHHHHHHHHHHHCT
T ss_pred             -----------------------------chHHHHHHHHHHHHHhhcchhhhccCCcccEEEEEEChhHHHHHHHHhhCC


Q ss_pred             hhhhhHHHhhhhhh
Q psy7108         568 EYQTKVRLNVLWAQ  581 (703)
Q Consensus       568 ~~~~~~~~~~~~~p  581 (703)
                      +    ++..+.++|
T Consensus       190 ~----v~~~v~~~~  199 (306)
T 3vis_A          190 D----LKAAIPLTP  199 (306)
T ss_dssp             T----CSEEEEESC
T ss_pred             C----eeEEEEecc

>1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27

Probab=88.96  E-value=0.037  Score=52.88  Aligned_cols=40  Identities=15%  Similarity=-0.020  Sum_probs=30.3

Q ss_pred             ccCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCc
Q psy7108         527 GLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRP  567 (703)
Q Consensus       527 g~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~  567 (703)
                      -..|+.++++++..... .++.++|||+||..++..+.+.|
T Consensus        88 ~~~d~~~~~~~l~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~  127 (238)
T 1ufo_A           88 FKEEARRVAEEAERRFG-LPLFLAGGSLGAFVAHLLLAEGF  127 (238)
T ss_dssp             HHHHHHHHHHHHHHHHC-CCEEEEEETHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHhccC-CcEEEEEEChHHHHHHHHHHhcc
Confidence            34577778888875543 79999999999988777666555

>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A

Probab=88.94  E-value=0.2  Score=49.88  Aligned_cols=52  Identities=17%  Similarity=0.203  Sum_probs=40.9

Q ss_pred             cchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccccc
Q psy7108         611 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFL  667 (703)
Q Consensus       611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~  667 (703)
                      -|+-+.++++....  ++++++|||+|+.+++.++..+|+   +|+.+++++|...+
T Consensus       106 ~d~~~~~~~l~~~~--~~v~lvG~S~GG~ia~~~a~~~p~---~v~~lvl~~~~~~~  157 (281)
T 4fbl_A          106 ADIVAAMRWLEERC--DVLFMTGLSMGGALTVWAAGQFPE---RFAGIMPINAALRM  157 (281)
T ss_dssp             HHHHHHHHHHHHHC--SEEEEEEETHHHHHHHHHHHHSTT---TCSEEEEESCCSCC
T ss_pred             HHHHHHHHHHHhCC--CeEEEEEECcchHHHHHHHHhCch---hhhhhhcccchhcc
Confidence            46777888876543  579999999999999998888775   57778888887544

>1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7

Probab=88.87  E-value=0.2  Score=50.25  Aligned_cols=45  Identities=24%  Similarity=0.276  Sum_probs=35.0

Q ss_pred             HHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccc
Q psy7108         617 IDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS  664 (703)
Q Consensus       617 i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~  664 (703)
                      +..++..-+.++++++|||+|+++++.++..+|+   +|+.+++++|.
T Consensus        92 l~~l~~~l~~~~~~lvGhSmGg~ia~~~a~~~p~---~v~~lvl~~~~  136 (313)
T 1azw_A           92 IERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQ---QVTELVLRGIF  136 (313)
T ss_dssp             HHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGG---GEEEEEEESCC
T ss_pred             HHHHHHHhCCCceEEEEECHHHHHHHHHHHhChh---heeEEEEeccc
Confidence            4445566677789999999999999999888775   46677777654

>3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti}

Probab=88.81  E-value=0.33  Score=48.64  Aligned_cols=46  Identities=28%  Similarity=0.364  Sum_probs=35.1

Q ss_pred             HHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccc
Q psy7108         617 IDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  665 (703)
Q Consensus       617 i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~  665 (703)
                      +..+++..+..+++++|||+|+.+++.++..+|+   +++.+++++|..
T Consensus       124 l~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p~---~v~~lvl~~~~~  169 (314)
T 3kxp_A          124 IAGLIRTLARGHAILVGHSLGARNSVTAAAKYPD---LVRSVVAIDFTP  169 (314)
T ss_dssp             HHHHHHHHTSSCEEEEEETHHHHHHHHHHHHCGG---GEEEEEEESCCT
T ss_pred             HHHHHHHhCCCCcEEEEECchHHHHHHHHHhChh---heeEEEEeCCCC
Confidence            3334444455789999999999999999888775   577888888765

>3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A

Probab=88.80  E-value=0.066  Score=53.12  Aligned_cols=37  Identities=22%  Similarity=0.129  Sum_probs=26.3

Q ss_pred             CCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhh
Q psy7108         543 GHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS  582 (703)
Q Consensus       543 ~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~  582 (703)
                      +..++.++|||+||..++..+.+.|   ++++.++..+|.
T Consensus       108 ~~~~~~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~  144 (293)
T 3hss_A          108 DIAPARVVGVSMGAFIAQELMVVAP---ELVSSAVLMATR  144 (293)
T ss_dssp             TCCSEEEEEETHHHHHHHHHHHHCG---GGEEEEEEESCC
T ss_pred             CCCcEEEEeeCccHHHHHHHHHHCh---HHHHhhheeccc
Confidence            4568999999999988776555443   356666666654

>1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A*

Probab=88.76  E-value=0.25  Score=46.37  Aligned_cols=53  Identities=13%  Similarity=-0.012  Sum_probs=38.2

Q ss_pred             chHHHHHHHHhh-CCCCceEEEEeChhHHHHHHHhc-CCchHHHHHHHheeccccccc
Q psy7108         612 DTTATIDYILNQ-TGHNSLITLGHSLGTTNVLIAGS-LRPEYQTKVRLNVLWAQSAFL  667 (703)
Q Consensus       612 d~pa~i~~i~~~-t~~~~~~~vg~s~g~~~~~~~~s-~~~~~~~~i~~~~~l~p~~~~  667 (703)
                      |+.+.++++.+. ....++.++|||+|+.+++.++. .+|+   +++.+++++|....
T Consensus        90 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~---~~~~~v~~~~~~~~  144 (218)
T 1auo_A           90 MVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQG---PLGGVIALSTYAPT  144 (218)
T ss_dssp             HHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCS---CCCEEEEESCCCTT
T ss_pred             HHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCCC---CccEEEEECCCCCC
Confidence            344555655441 12358999999999999999888 7665   57788888887654

>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*

Probab=88.67  E-value=0.11  Score=50.71  Aligned_cols=81  Identities=16%  Similarity=0.178  Sum_probs=0.0

Q ss_pred             CCcccchhhhhhcccccccceeecccCccccccCcccCcCCccceeeeecccchhhhhhhhcCCcccccccccccCCCCC
Q psy7108         410 DTKFLPPTLFARMRTRGYDIWLWNARGNVYSREHVNLTSEQNKFYRFSCDFNVYTLELISRLGPLRIKPKVEKMETGSSD  489 (703)
Q Consensus       410 ~~~~sl~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  489 (703)
                      +.......+...+.++||.|+..|.||...|...      ...                                     
T Consensus        23 ~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~------~~~-------------------------------------   59 (267)
T 3sty_A           23 HGAWCWYKIVALMRSSGHNVTALDLGASGINPKQ------ALQ-------------------------------------   59 (267)
T ss_dssp             CCGGGGHHHHHHHHHTTCEEEEECCTTSTTCSCC------GGG-------------------------------------
T ss_pred             CCcchHHHHHHHHHhcCCeEEEeccccCCCCCCc------CCc-------------------------------------


Q ss_pred             CcCCCcccceeecccCcCCCCCCccccccCchhhhhcccCCchhhHHHhHccC-CCcceEEEEEecCceeeeeccCCCch
Q psy7108         490 EESSKDDETEIRVLDEDVPRSSDTGDIQLKSTRMNELGLYDTTATIDYILNQT-GHNSLITLGHSLGTTNVLIAGSLRPE  568 (703)
Q Consensus       490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~~~~~~i~~~~-~~~~~~~~g~S~G~~~~~~~~~~~~~  568 (703)
                                                         ...+.+..+.+.-++..- ...++.++|||+||..++....+.|+
T Consensus        60 -----------------------------------~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~  104 (267)
T 3sty_A           60 -----------------------------------IPNFSDYLSPLMEFMASLPANEKIILVGHALGGLAISKAMETFPE  104 (267)
T ss_dssp             -----------------------------------CCSHHHHHHHHHHHHHTSCTTSCEEEEEETTHHHHHHHHHHHSGG
T ss_pred             -----------------------------------cCCHHHHHHHHHHHHHhcCCCCCEEEEEEcHHHHHHHHHHHhChh

>2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2

Probab=88.67  E-value=0.19  Score=49.10  Aligned_cols=56  Identities=14%  Similarity=0.094  Sum_probs=43.3

Q ss_pred             cchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCc---hHHHHHHHheeccccccc
Q psy7108         611 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRP---EYQTKVRLNVLWAQSAFL  667 (703)
Q Consensus       611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~---~~~~~i~~~~~l~p~~~~  667 (703)
                      -|+-+.++++..... .+++++|||+|+.+++.++....   ....+++.+++++|+..+
T Consensus       114 ~d~~~~~~~l~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~~~~  172 (262)
T 2pbl_A          114 QQISQAVTAAAKEID-GPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDL  172 (262)
T ss_dssp             HHHHHHHHHHHHHSC-SCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCC
T ss_pred             HHHHHHHHHHHHhcc-CCEEEEEECHHHHHHHHHhccccccccccccceEEEEecCccCc
Confidence            567788898887766 78999999999999998887741   113467888899987644

>2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A

Probab=88.61  E-value=0.22  Score=49.56  Aligned_cols=43  Identities=12%  Similarity=0.241  Sum_probs=35.5

Q ss_pred             HhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccc
Q psy7108         621 LNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF  666 (703)
Q Consensus       621 ~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~  666 (703)
                      +..-+.+++++||||+|+.+++.++..+|+   +|+.+++++|...
T Consensus        98 l~~l~~~~~~lvGhS~GG~va~~~A~~~p~---~v~~lvl~~~~~~  140 (286)
T 2puj_A           98 MDALDIDRAHLVGNAMGGATALNFALEYPD---RIGKLILMGPGGL  140 (286)
T ss_dssp             HHHTTCCCEEEEEETHHHHHHHHHHHHCGG---GEEEEEEESCSCC
T ss_pred             HHHhCCCceEEEEECHHHHHHHHHHHhChH---hhheEEEECcccc
Confidence            444566789999999999999999988776   5788898888763

>4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A

Probab=88.51  E-value=0.13  Score=49.83  Aligned_cols=42  Identities=26%  Similarity=0.327  Sum_probs=28.4

Q ss_pred             hHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhh
Q psy7108         538 ILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS  582 (703)
Q Consensus       538 i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~  582 (703)
                      +++.-+.+++.++|||+||+.++....+.|   ++++.++..+|.
T Consensus        83 ~~~~~~~~~~~l~GhS~Gg~~a~~~a~~~p---~~v~~lvl~~~~  124 (269)
T 4dnp_A           83 ILDALGIDCCAYVGHSVSAMIGILASIRRP---ELFSKLILIGAS  124 (269)
T ss_dssp             HHHHTTCCSEEEEEETHHHHHHHHHHHHCT---TTEEEEEEESCC
T ss_pred             HHHhcCCCeEEEEccCHHHHHHHHHHHhCc---HhhceeEEeCCC
Confidence            333335568999999999987776555443   356666666654

>1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A

Probab=88.49  E-value=0.011  Score=63.38  Aligned_cols=56  Identities=14%  Similarity=0.041  Sum_probs=40.6

Q ss_pred             cccCCchhhHHHhHccCC--CcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhhh
Q psy7108         526 LGLYDTTATIDYILNQTG--HNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF  584 (703)
Q Consensus       526 ~g~~d~~~~~~~i~~~~~--~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~  584 (703)
                      ....|+.+.++++.+..+  .+++.++|||+||.+++.++.+.|   .++...+.++|+.-
T Consensus       125 ~~~~dl~~~i~~l~~~~g~~~~~i~lvGhSlGg~vA~~~a~~~p---~~v~~iv~l~pa~p  182 (432)
T 1gpl_A          125 VVGAEVAYLVQVLSTSLNYAPENVHIIGHSLGAHTAGEAGKRLN---GLVGRITGLDPAEP  182 (432)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHTTT---TCSSEEEEESCBCT
T ss_pred             HHHHHHHHHHHHHHHhcCCCcccEEEEEeCHHHHHHHHHHHhcc---cccceeEEeccccc
Confidence            334678888999976544  689999999999988776665544   35666677776643

>2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis}

Probab=88.48  E-value=0.21  Score=46.99  Aligned_cols=53  Identities=23%  Similarity=0.262  Sum_probs=41.2

Q ss_pred             cchHHHHHHHHhhCC--CCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccc
Q psy7108         611 YDTTATIDYILNQTG--HNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF  666 (703)
Q Consensus       611 ~d~pa~i~~i~~~t~--~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~  666 (703)
                      -|+.+.++++.....  ..++.++|||+|+.+++.++..+|+   .++.+++++|...
T Consensus        96 ~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~---~v~~~v~~~~~~~  150 (223)
T 2o2g_A           96 SRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPE---TVQAVVSRGGRPD  150 (223)
T ss_dssp             HHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTT---TEEEEEEESCCGG
T ss_pred             HHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCC---ceEEEEEeCCCCC
Confidence            577889999877643  3489999999999999988887664   4677777777643

>1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13

Probab=88.47  E-value=0.23  Score=50.26  Aligned_cols=48  Identities=8%  Similarity=0.018  Sum_probs=36.8

Q ss_pred             cchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccc
Q psy7108         611 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS  664 (703)
Q Consensus       611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~  664 (703)
                      .|+.+.++++. ..+..+++++|||+|+.+++.++.. |    .++.++.++|+
T Consensus        91 ~D~~~~~~~l~-~~~~~~~~lvGhSmGG~iA~~~A~~-~----~v~~lvl~~~~  138 (305)
T 1tht_A           91 NSLCTVYHWLQ-TKGTQNIGLIAASLSARVAYEVISD-L----ELSFLITAVGV  138 (305)
T ss_dssp             HHHHHHHHHHH-HTTCCCEEEEEETHHHHHHHHHTTT-S----CCSEEEEESCC
T ss_pred             HHHHHHHHHHH-hCCCCceEEEEECHHHHHHHHHhCc-c----CcCEEEEecCc
Confidence            57888899876 3456789999999999999888776 5    35666666554

>1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13

Probab=88.46  E-value=0.087  Score=53.46  Aligned_cols=37  Identities=11%  Similarity=0.058  Sum_probs=27.8

Q ss_pred             cCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCC
Q psy7108         528 LYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSL  565 (703)
Q Consensus       528 ~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~  565 (703)
                      ..|+.+.++|+... +..++.++|||+||..++....+
T Consensus        90 ~~D~~~~~~~l~~~-~~~~~~lvGhSmGG~iA~~~A~~  126 (305)
T 1tht_A           90 KNSLCTVYHWLQTK-GTQNIGLIAASLSARVAYEVISD  126 (305)
T ss_dssp             HHHHHHHHHHHHHT-TCCCEEEEEETHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHHHhC-CCCceEEEEECHHHHHHHHHhCc
Confidence            35677788888643 45789999999999877765554

>1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E

Probab=88.42  E-value=0.19  Score=51.34  Aligned_cols=49  Identities=20%  Similarity=0.247  Sum_probs=38.4

Q ss_pred             hHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccc
Q psy7108         613 TTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS  664 (703)
Q Consensus       613 ~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~  664 (703)
                      +-+.++.++...+..++++||||+|+.++..++...|+   +|+.++.++|.
T Consensus        65 l~~~i~~~l~~~~~~~v~lvGHS~GG~va~~~a~~~p~---~V~~lV~i~~p  113 (320)
T 1ys1_X           65 LLAYVKTVLAATGATKVNLVGHSQGGLTSRYVAAVAPD---LVASVTTIGTP  113 (320)
T ss_dssp             HHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCGG---GEEEEEEESCC
T ss_pred             HHHHHHHHHHHhCCCCEEEEEECHhHHHHHHHHHhChh---hceEEEEECCC
Confidence            34455666666777899999999999999988887665   67888888864

>1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A

Probab=88.37  E-value=0.12  Score=51.57  Aligned_cols=47  Identities=9%  Similarity=0.062  Sum_probs=34.9

Q ss_pred             HHHHHHHhhCC-CCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccc
Q psy7108         615 ATIDYILNQTG-HNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQ  663 (703)
Q Consensus       615 a~i~~i~~~t~-~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p  663 (703)
                      +.++++....+ ..++++||||||+.++..++..+|+  .+|+.+|.+++
T Consensus        67 ~~~~~l~~~~~l~~~~~lvGhSmGG~ia~~~a~~~~~--~~v~~lv~~~~  114 (279)
T 1ei9_A           67 TVCQILAKDPKLQQGYNAMGFSQGGQFLRAVAQRCPS--PPMVNLISVGG  114 (279)
T ss_dssp             HHHHHHHSCGGGTTCEEEEEETTHHHHHHHHHHHCCS--SCEEEEEEESC
T ss_pred             HHHHHHHhhhhccCCEEEEEECHHHHHHHHHHHHcCC--cccceEEEecC
Confidence            44555544322 2689999999999999998888775  25888888885

>4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp}

Probab=88.33  E-value=0.022  Score=59.84  Aligned_cols=27  Identities=15%  Similarity=0.111  Sum_probs=21.0

Q ss_pred             CcceEEEEEecCceeeeeccCCCchhh
Q psy7108         544 HNSLITLGHSLGTTNVLIAGSLRPEYQ  570 (703)
Q Consensus       544 ~~~~~~~g~S~G~~~~~~~~~~~~~~~  570 (703)
                      ..+++++|||+||..++.+....|+|.
T Consensus       160 ~~~v~l~G~S~GG~~al~~A~~~p~~~  186 (377)
T 4ezi_A          160 SDKLYLAGYSEGGFSTIVMFEMLAKEY  186 (377)
T ss_dssp             EEEEEEEEETHHHHHHHHHHHHHHHHC
T ss_pred             CCceEEEEECHHHHHHHHHHHHhhhhC
Confidence            479999999999988877665555553

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=88.30  E-value=24  Score=35.93  Aligned_cols=79  Identities=15%  Similarity=0.084  Sum_probs=49.5

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEe-------cCCCcEEEEEEecC---CCEEEEE-
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETI-------QLLSDALCVAYKPD---GTEIVVA-  109 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~-------~~~~~V~~v~~spd---g~~las~-  109 (703)
                      .++...-..-+.++|.|  +|.++++--..|.|++++..++.. ..+.       ........++++|+   +..|.+. 
T Consensus        25 ~~va~gL~~P~~ia~~p--dG~llVter~~G~I~~v~~~~g~~-~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~y  101 (347)
T 3das_A           25 RTVATGLNSPWGLAPLP--GGDLLVSSRDEATITRVDAKTGRK-TELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYF  101 (347)
T ss_dssp             EEEECCCSSEEEEEECT--TSCEEEEETTTCEEEEECTTTCCE-EEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEE
T ss_pred             EEeecCCCCceEEEEcC--CCcEEEEEecCCEEEEEECCCCcE-eeecccCceeecCCCCceeeEeccccccCCEEEEEE
Confidence            34444445678999999  999888776588898887654432 2221       23456899999996   3444432 


Q ss_pred             E--CCCeEEEEEcCC
Q psy7108         110 T--LDGQLIMFDVES  122 (703)
Q Consensus       110 s--~dg~I~vwd~~~  122 (703)
                      +  .++.|.-|....
T Consensus       102 t~~~~~~v~R~~~~~  116 (347)
T 3das_A          102 TSASDNRIVRMLYDE  116 (347)
T ss_dssp             ECSSSEEEEEEEBCT
T ss_pred             ecCCCCEEEEEEeCC
Confidence            2  344555565543

>1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A

Probab=88.26  E-value=0.23  Score=49.25  Aligned_cols=43  Identities=14%  Similarity=0.159  Sum_probs=35.2

Q ss_pred             HhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccc
Q psy7108         621 LNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF  666 (703)
Q Consensus       621 ~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~  666 (703)
                      ++.-+.+++++||||+|+.+++.++..+|+   +|+.+++++|...
T Consensus        89 l~~l~~~~~~lvGhS~GG~ia~~~A~~~P~---~v~~lvl~~~~~~  131 (282)
T 1iup_A           89 MDALEIEKAHIVGNAFGGGLAIATALRYSE---RVDRMVLMGAAGT  131 (282)
T ss_dssp             HHHTTCCSEEEEEETHHHHHHHHHHHHSGG---GEEEEEEESCCCS
T ss_pred             HHHhCCCceEEEEECHhHHHHHHHHHHChH---HHHHHHeeCCccC
Confidence            445566789999999999999999988776   5788888887654

>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0

Probab=88.06  E-value=0.53  Score=45.26  Aligned_cols=43  Identities=21%  Similarity=0.318  Sum_probs=34.7

Q ss_pred             hhCCC-CceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccccc
Q psy7108         622 NQTGH-NSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFL  667 (703)
Q Consensus       622 ~~t~~-~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~  667 (703)
                      ...+. .+++++|||+|+.+++.++..+|+   +++.++.++|....
T Consensus        67 ~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~---~v~~lvl~~~~~~~  110 (258)
T 3dqz_A           67 KSLPENEEVILVGFSFGGINIALAADIFPA---KIKVLVFLNAFLPD  110 (258)
T ss_dssp             HTSCTTCCEEEEEETTHHHHHHHHHTTCGG---GEEEEEEESCCCCC
T ss_pred             HHhcccCceEEEEeChhHHHHHHHHHhChH---hhcEEEEecCCCCC
Confidence            33454 789999999999999999999775   58888888886543

>1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32

Probab=87.99  E-value=0.21  Score=49.14  Aligned_cols=55  Identities=20%  Similarity=0.269  Sum_probs=41.1

Q ss_pred             cchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCC----chH----------HHHHHHheeccccc
Q psy7108         611 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLR----PEY----------QTKVRLNVLWAQSA  665 (703)
Q Consensus       611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~----~~~----------~~~i~~~~~l~p~~  665 (703)
                      -|+-+.++++++..+..+++++|||+|+.+++.++...    |.+          ..+++.+++++|+.
T Consensus        98 ~d~~~~~~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~  166 (273)
T 1vkh_A           98 YDAVSNITRLVKEKGLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIY  166 (273)
T ss_dssp             HHHHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCC
T ss_pred             HHHHHHHHHHHHhCCcCcEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccc
Confidence            46677888888877777899999999999988877763    221          34566777777654

>1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli}

Probab=87.97  E-value=0.25  Score=48.99  Aligned_cols=46  Identities=22%  Similarity=0.224  Sum_probs=35.9

Q ss_pred             HHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccc
Q psy7108         618 DYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF  666 (703)
Q Consensus       618 ~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~  666 (703)
                      .-++...+.++++++|||+|+.+++.++..+|+   +++.+++++|...
T Consensus        98 ~~~l~~l~~~~~~lvGhS~GG~ia~~~a~~~p~---~v~~lvl~~~~~~  143 (289)
T 1u2e_A           98 KSVVDQLDIAKIHLLGNSMGGHSSVAFTLKWPE---RVGKLVLMGGGTG  143 (289)
T ss_dssp             HHHHHHTTCCCEEEEEETHHHHHHHHHHHHCGG---GEEEEEEESCSCC
T ss_pred             HHHHHHhCCCceEEEEECHhHHHHHHHHHHCHH---hhhEEEEECCCcc
Confidence            334455566789999999999999998888775   5778888887653

>1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A

Probab=87.93  E-value=0.081  Score=52.40  Aligned_cols=80  Identities=18%  Similarity=0.119  Sum_probs=0.0

Q ss_pred             CCcccchhhhhhcccccccceeecccCccccccCcccCcCCccceeeeecccchhhhhhhhcCCcccccccccccCCCCC
Q psy7108         410 DTKFLPPTLFARMRTRGYDIWLWNARGNVYSREHVNLTSEQNKFYRFSCDFNVYTLELISRLGPLRIKPKVEKMETGSSD  489 (703)
Q Consensus       410 ~~~~sl~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  489 (703)
                      +.......++..+.++||.|+..|.||...|.....                                            
T Consensus        34 ~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~--------------------------------------------   69 (277)
T 1brt_A           34 LSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTT--------------------------------------------   69 (277)
T ss_dssp             CCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSS--------------------------------------------
T ss_pred             CcHHHHHHHHHHHhhCCCEEEEeCCCCCCCCCCCCC--------------------------------------------


Q ss_pred             CcCCCcccceeecccCcCCCCCCccccccCchhhhhcccCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCch
Q psy7108         490 EESSKDDETEIRVLDEDVPRSSDTGDIQLKSTRMNELGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPE  568 (703)
Q Consensus       490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~  568 (703)
                                                         ...+.+..+.+.-++..-+.+++.++|||+||..++....+.|+
T Consensus        70 -----------------------------------~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~  113 (277)
T 1brt_A           70 -----------------------------------GYDYDTFAADLNTVLETLDLQDAVLVGFSTGTGEVARYVSSYGT  113 (277)
T ss_dssp             -----------------------------------CCSHHHHHHHHHHHHHHHTCCSEEEEEEGGGHHHHHHHHHHHCS
T ss_pred             -----------------------------------CccHHHHHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHcCc

>1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35

Probab=87.91  E-value=0.18  Score=49.42  Aligned_cols=17  Identities=6%  Similarity=-0.052  Sum_probs=14.9

Q ss_pred             ccccceeecccCccccc
Q psy7108         425 RGYDIWLWNARGNVYSR  441 (703)
Q Consensus       425 ~~~~~~~~~~~~~~~~~  441 (703)
                      .||.|...|.||...|.
T Consensus        42 ~~~~vi~~Dl~GhG~S~   58 (264)
T 1r3d_A           42 TQCAALTLDLPGHGTNP   58 (264)
T ss_dssp             SSCEEEEECCTTCSSCC
T ss_pred             cCceEEEecCCCCCCCC
Confidence            69999999999987664

>2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens}

Probab=87.90  E-value=0.071  Score=49.58  Aligned_cols=42  Identities=19%  Similarity=0.208  Sum_probs=28.6

Q ss_pred             HHhHccCCC-cceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhh
Q psy7108         536 DYILNQTGH-NSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS  582 (703)
Q Consensus       536 ~~i~~~~~~-~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~  582 (703)
                      +.++..-+. .++.++|||+||..++....+.|     ++.++..+|.
T Consensus        57 ~~~~~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p-----v~~lvl~~~~   99 (194)
T 2qs9_A           57 PFMETELHCDEKTIIIGHSSGAIAAMRYAETHR-----VYAIVLVSAY   99 (194)
T ss_dssp             HHHHHTSCCCTTEEEEEETHHHHHHHHHHHHSC-----CSEEEEESCC
T ss_pred             HHHHHHhCcCCCEEEEEcCcHHHHHHHHHHhCC-----CCEEEEEcCC
Confidence            344444344 78999999999998776665554     6666666654

>2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A*

Probab=87.88  E-value=0.1  Score=52.99  Aligned_cols=35  Identities=20%  Similarity=0.275  Sum_probs=25.0

Q ss_pred             CcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhh
Q psy7108         544 HNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQ  581 (703)
Q Consensus       544 ~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p  581 (703)
                      .+++.++|||+||..++....+.|+   +++.++..+|
T Consensus       103 ~~~~~lvGhS~Gg~ia~~~A~~~p~---~v~~lvl~~~  137 (328)
T 2cjp_A          103 EEKVFVVAHDWGALIAWHLCLFRPD---KVKALVNLSV  137 (328)
T ss_dssp             CSSEEEEEETHHHHHHHHHHHHCGG---GEEEEEEESC
T ss_pred             CCCeEEEEECHHHHHHHHHHHhChh---heeEEEEEcc
Confidence            5689999999999988776665553   4555555443

>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}

Probab=87.87  E-value=0.26  Score=49.02  Aligned_cols=49  Identities=24%  Similarity=0.262  Sum_probs=39.5

Q ss_pred             HHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccc
Q psy7108         614 TATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  665 (703)
Q Consensus       614 pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~  665 (703)
                      -+.+..++...+..+++++|||+|+.+++.++..+|+   .++.+++++|+.
T Consensus       101 ~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~lvl~~~~~  149 (315)
T 4f0j_A          101 AANTHALLERLGVARASVIGHSMGGMLATRYALLYPR---QVERLVLVNPIG  149 (315)
T ss_dssp             HHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHCGG---GEEEEEEESCSC
T ss_pred             HHHHHHHHHHhCCCceEEEEecHHHHHHHHHHHhCcH---hhheeEEecCcc
Confidence            3455566666777789999999999999999988775   578888898864

>1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27

Probab=87.84  E-value=0.27  Score=46.66  Aligned_cols=51  Identities=12%  Similarity=-0.002  Sum_probs=38.7

Q ss_pred             cchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccc
Q psy7108         611 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  665 (703)
Q Consensus       611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~  665 (703)
                      -|+.+.++++..... .++.++|||+|+.+++.++..+|+   .+..++..+|..
T Consensus        90 ~d~~~~~~~l~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~~---~~~~~~~~~~~~  140 (238)
T 1ufo_A           90 EEARRVAEEAERRFG-LPLFLAGGSLGAFVAHLLLAEGFR---PRGVLAFIGSGF  140 (238)
T ss_dssp             HHHHHHHHHHHHHHC-CCEEEEEETHHHHHHHHHHHTTCC---CSCEEEESCCSS
T ss_pred             HHHHHHHHHHHhccC-CcEEEEEEChHHHHHHHHHHhccC---cceEEEEecCCc
Confidence            577888998876544 789999999999999998888774   345555555543

>2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans}

Probab=87.83  E-value=0.33  Score=47.61  Aligned_cols=42  Identities=12%  Similarity=0.072  Sum_probs=34.0

Q ss_pred             hCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccccc
Q psy7108         623 QTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFL  667 (703)
Q Consensus       623 ~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~  667 (703)
                      .-+.++++++|||+|+.+++.++..+|+   +|+.+++++|....
T Consensus        88 ~l~~~~~~lvGhS~Gg~va~~~A~~~p~---~v~~lvl~~~~~~~  129 (266)
T 2xua_A           88 TLKIARANFCGLSMGGLTGVALAARHAD---RIERVALCNTAARI  129 (266)
T ss_dssp             HTTCCSEEEEEETHHHHHHHHHHHHCGG---GEEEEEEESCCSSC
T ss_pred             hcCCCceEEEEECHHHHHHHHHHHhChh---hhheeEEecCCCCC
Confidence            3455689999999999999998888775   58888888887644

>3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans}

Probab=87.82  E-value=0.11  Score=51.52  Aligned_cols=42  Identities=14%  Similarity=0.007  Sum_probs=27.2

Q ss_pred             HHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhh
Q psy7108         536 DYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWA  580 (703)
Q Consensus       536 ~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~  580 (703)
                      ..++..-+..++.++|||+||..++....+.|+   +++.++..+
T Consensus       101 ~~~l~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~  142 (292)
T 3l80_A          101 LMIFEHFKFQSYLLCVHSIGGFAALQIMNQSSK---ACLGFIGLE  142 (292)
T ss_dssp             HHHHHHSCCSEEEEEEETTHHHHHHHHHHHCSS---EEEEEEEES
T ss_pred             HHHHHHhCCCCeEEEEEchhHHHHHHHHHhCch---heeeEEEEC
Confidence            334444455699999999999877766555443   444455444

>2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40

Probab=87.81  E-value=0.24  Score=50.92  Aligned_cols=50  Identities=18%  Similarity=0.199  Sum_probs=39.1

Q ss_pred             HHHHHHHhhCCCCce-EEEEeChhHHHHHHHhcCCchHHHHHHHheeccccccc
Q psy7108         615 ATIDYILNQTGHNSL-ITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFL  667 (703)
Q Consensus       615 a~i~~i~~~t~~~~~-~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~  667 (703)
                      +.+..++...+.+++ +++|||+|+.+++.++..+|+   +|+.+++++|....
T Consensus       132 ~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~~  182 (366)
T 2pl5_A          132 KAQKLLVESLGIEKLFCVAGGSMGGMQALEWSIAYPN---SLSNCIVMASTAEH  182 (366)
T ss_dssp             HHHHHHHHHTTCSSEEEEEEETHHHHHHHHHHHHSTT---SEEEEEEESCCSBC
T ss_pred             HHHHHHHHHcCCceEEEEEEeCccHHHHHHHHHhCcH---hhhheeEeccCccC
Confidence            344555556677788 799999999999999888776   57888888887654

>3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV}

Probab=87.79  E-value=0.27  Score=48.66  Aligned_cols=53  Identities=21%  Similarity=0.201  Sum_probs=42.3

Q ss_pred             cchHHHHHHHHhhCC--CCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccccC
Q psy7108         611 YDTTATIDYILNQTG--HNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLG  668 (703)
Q Consensus       611 ~d~pa~i~~i~~~t~--~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~~  668 (703)
                      -|+-+.++++....+  ..+++++|||+|+.+++.++..+|     ++.+++++|.....
T Consensus        83 ~d~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~-----~~~~~l~~p~~~~~  137 (290)
T 3ksr_A           83 DDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP-----VEWLALRSPALYKD  137 (290)
T ss_dssp             HHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC-----CSEEEEESCCCCCS
T ss_pred             HHHHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC-----CCEEEEeCcchhhh
Confidence            578889999887653  357999999999999999998877     56677778876543

>4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A

Probab=87.64  E-value=0.31  Score=47.09  Aligned_cols=48  Identities=25%  Similarity=0.282  Sum_probs=37.0

Q ss_pred             HHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccccc
Q psy7108         617 IDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFL  667 (703)
Q Consensus       617 i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~  667 (703)
                      +.-++...+..+++++|||+|+.+++.++..+|+   +++.+++++|...+
T Consensus        80 ~~~~~~~~~~~~~~l~GhS~Gg~~a~~~a~~~p~---~v~~lvl~~~~~~~  127 (269)
T 4dnp_A           80 LLHILDALGIDCCAYVGHSVSAMIGILASIRRPE---LFSKLILIGASPRF  127 (269)
T ss_dssp             HHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCTT---TEEEEEEESCCSCC
T ss_pred             HHHHHHhcCCCeEEEEccCHHHHHHHHHHHhCcH---hhceeEEeCCCCCC
Confidence            3334445566789999999999999988887765   57888999987543

>1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32

Probab=87.54  E-value=0.064  Score=53.05  Aligned_cols=38  Identities=26%  Similarity=0.473  Sum_probs=29.9

Q ss_pred             cCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCC
Q psy7108         528 LYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSL  565 (703)
Q Consensus       528 ~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~  565 (703)
                      +.|+.++++|+++.-+..++.++|||+||..++....+
T Consensus        97 ~~d~~~~~~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~  134 (273)
T 1vkh_A           97 LYDAVSNITRLVKEKGLTNINMVGHSVGATFIWQILAA  134 (273)
T ss_dssp             HHHHHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHTG
T ss_pred             HHHHHHHHHHHHHhCCcCcEEEEEeCHHHHHHHHHHHH
Confidence            44777788998876566799999999999877765554

>2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A

Probab=87.52  E-value=0.29  Score=47.42  Aligned_cols=49  Identities=24%  Similarity=0.438  Sum_probs=36.5

Q ss_pred             HHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccc
Q psy7108         614 TATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF  666 (703)
Q Consensus       614 pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~  666 (703)
                      -+.++++ +.-+.++++++|||+|+.+++.++..+|+   .|+.+++++|..+
T Consensus        82 ~~~~~~l-~~l~~~~~~l~GhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~  130 (254)
T 2ocg_A           82 KDAVDLM-KALKFKKVSLLGWSDGGITALIAAAKYPS---YIHKMVIWGANAY  130 (254)
T ss_dssp             HHHHHHH-HHTTCSSEEEEEETHHHHHHHHHHHHCTT---TEEEEEEESCCSB
T ss_pred             HHHHHHH-HHhCCCCEEEEEECHhHHHHHHHHHHChH---HhhheeEeccccc
Confidence            3444443 34456789999999999999999888776   4777888887654

>1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A

Probab=87.52  E-value=0.046  Score=50.30  Aligned_cols=49  Identities=22%  Similarity=0.217  Sum_probs=31.3

Q ss_pred             HHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhhh
Q psy7108         535 IDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF  584 (703)
Q Consensus       535 ~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~  584 (703)
                      +..+++.-+..++.++|||+||..++..+.+. ....+++.++..+|...
T Consensus        59 ~~~~~~~~~~~~~~lvG~S~Gg~~a~~~~~~~-~~~~~v~~~v~~~~~~~  107 (181)
T 1isp_A           59 VQKVLDETGAKKVDIVAHSMGGANTLYYIKNL-DGGNKVANVVTLGGANR  107 (181)
T ss_dssp             HHHHHHHHCCSCEEEEEETHHHHHHHHHHHHS-SGGGTEEEEEEESCCGG
T ss_pred             HHHHHHHcCCCeEEEEEECccHHHHHHHHHhc-CCCceEEEEEEEcCccc
Confidence            34444443557899999999998776655432 11346777777776543

>3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A

Probab=87.41  E-value=0.28  Score=48.37  Aligned_cols=48  Identities=21%  Similarity=0.149  Sum_probs=37.1

Q ss_pred             HHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccccc
Q psy7108         617 IDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFL  667 (703)
Q Consensus       617 i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~  667 (703)
                      +..+++..+..+++++|||+|+.+++.++..+|+   +++.+++++|....
T Consensus       100 ~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~~  147 (293)
T 3hss_A          100 TAALIETLDIAPARVVGVSMGAFIAQELMVVAPE---LVSSAVLMATRGRL  147 (293)
T ss_dssp             HHHHHHHHTCCSEEEEEETHHHHHHHHHHHHCGG---GEEEEEEESCCSSC
T ss_pred             HHHHHHhcCCCcEEEEeeCccHHHHHHHHHHChH---HHHhhheecccccC
Confidence            3334444466789999999999999988888765   58888888887644

>2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A

Probab=87.39  E-value=0.028  Score=58.14  Aligned_cols=54  Identities=22%  Similarity=0.147  Sum_probs=37.9

Q ss_pred             cCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhh
Q psy7108         528 LYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS  582 (703)
Q Consensus       528 ~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~  582 (703)
                      ..++.+.++.++...+.+++.++|||+||..+...+.+.+ ..++++.++.++|+
T Consensus       111 ~~~l~~~I~~l~~~~g~~~v~LVGHSmGG~iA~~~a~~~~-~p~~V~~lVlla~p  164 (342)
T 2x5x_A          111 YAIIKTFIDKVKAYTGKSQVDIVAHSMGVSMSLATLQYYN-NWTSVRKFINLAGG  164 (342)
T ss_dssp             HHHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHHT-CGGGEEEEEEESCC
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHHcC-chhhhcEEEEECCC
Confidence            4455667778877767789999999999987766554321 14567777776654

>3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A

Probab=87.35  E-value=0.29  Score=48.40  Aligned_cols=47  Identities=15%  Similarity=0.133  Sum_probs=36.5

Q ss_pred             HHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccc
Q psy7108         616 TIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  665 (703)
Q Consensus       616 ~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~  665 (703)
                      .+..++...+..+++++|||+|+.+++.++..+|+   +++.+++++|..
T Consensus        93 ~~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~  139 (306)
T 3r40_A           93 QLIEAMEQLGHVHFALAGHNRGARVSYRLALDSPG---RLSKLAVLDILP  139 (306)
T ss_dssp             HHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGG---GEEEEEEESCCC
T ss_pred             HHHHHHHHhCCCCEEEEEecchHHHHHHHHHhChh---hccEEEEecCCC
Confidence            34444555677789999999999999999888775   578888888643

>3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica}

Probab=87.29  E-value=0.3  Score=47.59  Aligned_cols=49  Identities=16%  Similarity=0.141  Sum_probs=37.3

Q ss_pred             HHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccccC
Q psy7108         617 IDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLG  668 (703)
Q Consensus       617 i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~~  668 (703)
                      +..++...+..+++++|||+|+.+++.++..+|   ++++.+++++|.....
T Consensus        88 ~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p---~~v~~lvl~~~~~~~~  136 (282)
T 3qvm_A           88 VEEILVALDLVNVSIIGHSVSSIIAGIASTHVG---DRISDITMICPSPCFM  136 (282)
T ss_dssp             HHHHHHHTTCCSEEEEEETHHHHHHHHHHHHHG---GGEEEEEEESCCSBSB
T ss_pred             HHHHHHHcCCCceEEEEecccHHHHHHHHHhCc---hhhheEEEecCcchhc
Confidence            334444556678999999999999998888755   4688899999876443

>1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18

Probab=87.27  E-value=0.044  Score=55.10  Aligned_cols=43  Identities=19%  Similarity=0.323  Sum_probs=28.2

Q ss_pred             HHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhh
Q psy7108         536 DYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQ  581 (703)
Q Consensus       536 ~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p  581 (703)
                      ..++...+..++.++|||+||.++..++.+.|   ++++.++..+|
T Consensus        65 ~~~~~~~~~~~v~lvGhS~GG~~a~~~a~~~p---~~v~~lv~i~~  107 (285)
T 1ex9_A           65 EEIVALSGQPKVNLIGHSHGGPTIRYVAAVRP---DLIASATSVGA  107 (285)
T ss_dssp             HHHHHHHCCSCEEEEEETTHHHHHHHHHHHCG---GGEEEEEEESC
T ss_pred             HHHHHHhCCCCEEEEEECHhHHHHHHHHHhCh---hheeEEEEECC
Confidence            33444435578999999999987766555443   35666666554

>2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A

Probab=87.23  E-value=0.11  Score=50.41  Aligned_cols=45  Identities=24%  Similarity=0.398  Sum_probs=29.1

Q ss_pred             hHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhh
Q psy7108         534 TIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS  582 (703)
Q Consensus       534 ~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~  582 (703)
                      .++++... +..++.++|||+||..++....+.|+   +++.++..+|.
T Consensus        84 ~~~~l~~l-~~~~~~l~GhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~  128 (254)
T 2ocg_A           84 AVDLMKAL-KFKKVSLLGWSDGGITALIAAAKYPS---YIHKMVIWGAN  128 (254)
T ss_dssp             HHHHHHHT-TCSSEEEEEETHHHHHHHHHHHHCTT---TEEEEEEESCC
T ss_pred             HHHHHHHh-CCCCEEEEEECHhHHHHHHHHHHChH---HhhheeEeccc
Confidence            33444433 45689999999999887766655543   45555555553

>3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0

Probab=87.22  E-value=0.25  Score=46.38  Aligned_cols=51  Identities=12%  Similarity=0.090  Sum_probs=37.1

Q ss_pred             hHHHHHHHHhhCCC--CceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccc
Q psy7108         613 TTATIDYILNQTGH--NSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF  666 (703)
Q Consensus       613 ~pa~i~~i~~~t~~--~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~  666 (703)
                      +-+.++.+....+.  .++.++|||+|+.+++.++..+|+   +++.+++++|...
T Consensus        86 ~~~~~~~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~---~~~~~v~~~~~~~  138 (209)
T 3og9_A           86 LTDEVSLLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKI---NFDKIIAFHGMQL  138 (209)
T ss_dssp             HHHHHHHHHHHHTCCGGGCEEEEETHHHHHHHHHHHTTSC---CCSEEEEESCCCC
T ss_pred             HHHHHHHHHHhcCCCcceEEEEEECHHHHHHHHHHHhCCc---ccceEEEECCCCC
Confidence            34455555555443  689999999999999988888775   4667777777543

>1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26

Probab=87.21  E-value=0.17  Score=49.21  Aligned_cols=42  Identities=33%  Similarity=0.339  Sum_probs=27.6

Q ss_pred             HHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhh
Q psy7108         536 DYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQ  581 (703)
Q Consensus       536 ~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p  581 (703)
                      +.++..-+ +++.++|||+||..++....+.|+   +++.++..+|
T Consensus        66 ~~l~~~l~-~~~~lvGhS~Gg~va~~~a~~~p~---~v~~lvl~~~  107 (258)
T 1m33_A           66 EAVLQQAP-DKAIWLGWSLGGLVASQIALTHPE---RVRALVTVAS  107 (258)
T ss_dssp             HHHHTTSC-SSEEEEEETHHHHHHHHHHHHCGG---GEEEEEEESC
T ss_pred             HHHHHHhC-CCeEEEEECHHHHHHHHHHHHhhH---hhceEEEECC
Confidence            33443333 689999999999887766655543   5665665543

>2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus}

Probab=87.18  E-value=0.31  Score=48.43  Aligned_cols=40  Identities=20%  Similarity=0.175  Sum_probs=32.5

Q ss_pred             hhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccc
Q psy7108         622 NQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  665 (703)
Q Consensus       622 ~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~  665 (703)
                      +.-+.++++++|||+|+.+++.++..+|+    ++.+++++|..
T Consensus        90 ~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~----v~~lvl~~~~~  129 (286)
T 2yys_A           90 EALGVERFGLLAHGFGAVVALEVLRRFPQ----AEGAILLAPWV  129 (286)
T ss_dssp             HHTTCCSEEEEEETTHHHHHHHHHHHCTT----EEEEEEESCCC
T ss_pred             HHhCCCcEEEEEeCHHHHHHHHHHHhCcc----hheEEEeCCcc
Confidence            33466789999999999999999888775    67788888764

>3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified}

Probab=87.16  E-value=0.21  Score=49.51  Aligned_cols=49  Identities=14%  Similarity=0.222  Sum_probs=37.6

Q ss_pred             HHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccccc
Q psy7108         616 TIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFL  667 (703)
Q Consensus       616 ~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~  667 (703)
                      .+..++...+..+++++|||+|+.+++.++..+|+   +|+.+++++|....
T Consensus        85 ~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~---~v~~lvl~~~~~~~  133 (309)
T 3u1t_A           85 YMDGFIDALGLDDMVLVIHDWGSVIGMRHARLNPD---RVAAVAFMEALVPP  133 (309)
T ss_dssp             HHHHHHHHHTCCSEEEEEEEHHHHHHHHHHHHCTT---TEEEEEEEEESCTT
T ss_pred             HHHHHHHHcCCCceEEEEeCcHHHHHHHHHHhChH---hheEEEEeccCCCC
Confidence            33344444466789999999999999998888775   58888888877544

>2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40

Probab=87.15  E-value=0.24  Score=51.18  Aligned_cols=51  Identities=18%  Similarity=0.140  Sum_probs=39.5

Q ss_pred             hHHHHHHHHhhCCCCceE-EEEeChhHHHHHHHhcCCchHHHHHHHheecccccc
Q psy7108         613 TTATIDYILNQTGHNSLI-TLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF  666 (703)
Q Consensus       613 ~pa~i~~i~~~t~~~~~~-~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~  666 (703)
                      +-+.+..++...+..+++ ++|||+|+.+++.++..+|+   .|+.+++++|...
T Consensus       139 ~~~~l~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~  190 (377)
T 2b61_A          139 IVKVQKALLEHLGISHLKAIIGGSFGGMQANQWAIDYPD---FMDNIVNLCSSIY  190 (377)
T ss_dssp             HHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHSTT---SEEEEEEESCCSS
T ss_pred             HHHHHHHHHHHcCCcceeEEEEEChhHHHHHHHHHHCch---hhheeEEeccCcc
Confidence            334555556666777888 99999999999999888776   5778888888654

>1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A

Probab=87.14  E-value=0.41  Score=46.33  Aligned_cols=45  Identities=22%  Similarity=0.265  Sum_probs=33.0

Q ss_pred             hHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccc
Q psy7108         613 TTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQ  663 (703)
Q Consensus       613 ~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p  663 (703)
                      +-+.++++.. .+.++++++|||+|+.+++.++..+|     ++.++.+++
T Consensus        73 ~~~~~~~l~~-~~~~~~~lvG~SmGG~ia~~~a~~~p-----v~~lvl~~~  117 (247)
T 1tqh_A           73 VMNGYEFLKN-KGYEKIAVAGLSLGGVFSLKLGYTVP-----IEGIVTMCA  117 (247)
T ss_dssp             HHHHHHHHHH-HTCCCEEEEEETHHHHHHHHHHTTSC-----CSCEEEESC
T ss_pred             HHHHHHHHHH-cCCCeEEEEEeCHHHHHHHHHHHhCC-----CCeEEEEcc
Confidence            3445555443 35568999999999999999888877     666776554

>2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A

Probab=87.09  E-value=0.24  Score=49.53  Aligned_cols=43  Identities=19%  Similarity=0.247  Sum_probs=34.8

Q ss_pred             HhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccc
Q psy7108         621 LNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF  666 (703)
Q Consensus       621 ~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~  666 (703)
                      +...+.+++++||||+|+.+++.++..+|+   +|+.+++++|...
T Consensus       100 l~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~---~v~~lvl~~~~~~  142 (291)
T 2wue_A          100 FDQLGLGRVPLVGNALGGGTAVRFALDYPA---RAGRLVLMGPGGL  142 (291)
T ss_dssp             HHHHTCCSEEEEEETHHHHHHHHHHHHSTT---TEEEEEEESCSSS
T ss_pred             HHHhCCCCeEEEEEChhHHHHHHHHHhChH---hhcEEEEECCCCC
Confidence            334456789999999999999999988776   5788899888764

>1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A*

Probab=87.05  E-value=0.31  Score=48.63  Aligned_cols=54  Identities=15%  Similarity=0.154  Sum_probs=39.2

Q ss_pred             eeeeeeecchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccc
Q psy7108         604 NIFQVGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  665 (703)
Q Consensus       604 s~~e~~~~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~  665 (703)
                      ++++++ -|+-+.++.    .+.++++++|||+|+.+++.++..+|+   .|+.+++++|..
T Consensus        76 ~~~~~a-~dl~~~l~~----l~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~  129 (298)
T 1q0r_A           76 GFGELA-ADAVAVLDG----WGVDRAHVVGLSMGATITQVIALDHHD---RLSSLTMLLGGG  129 (298)
T ss_dssp             CHHHHH-HHHHHHHHH----TTCSSEEEEEETHHHHHHHHHHHHCGG---GEEEEEEESCCC
T ss_pred             CHHHHH-HHHHHHHHH----hCCCceEEEEeCcHHHHHHHHHHhCch---hhheeEEecccC
Confidence            344444 245555554    456789999999999999999988776   577888887655

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=87.03  E-value=1.9  Score=41.02  Aligned_cols=108  Identities=8%  Similarity=0.050  Sum_probs=61.0

Q ss_pred             cCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCce-----eEEEecC--CCcEEEEEEecCCCEEEEEECCCeEEEEEc
Q psy7108          48 GPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDT-----QHETIQL--LSDALCVAYKPDGTEIVVATLDGQLIMFDV  120 (703)
Q Consensus        48 ~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~-----~~~~~~~--~~~V~~v~~spdg~~las~s~dg~I~vwd~  120 (703)
                      ..+.+++|+|  +|.+.+.  .+|.+.--+..+.+.     ....+..  -..-.++.|.|+|.+.++  .||.|+-++.
T Consensus        41 ~~~~~laf~P--~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~p  114 (236)
T 1tl2_A           41 SNFKFLFLSP--GGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASP  114 (236)
T ss_dssp             TTCSEEEECT--TSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESC
T ss_pred             ccceeEEECC--CccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCC
Confidence            3677999999  9987766  566654444433211     0111111  011367899999987777  5698887765


Q ss_pred             CCCcEEEEEeccccCCCCCCCCccchhhccc--CCccEEEEEEcCCCCEEEEEecCCcEE
Q psy7108         121 ESAAQVGSVEARRDLDSGRLDTDLVTREQSL--KAKAVSTVCYSADGSCILAAGQSKYIC  178 (703)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~V~~i~~spdg~~l~s~s~dg~I~  178 (703)
                      .+...-.-+               .......  .-+.+..+.+.|+|.+.++.  |+.++
T Consensus       115 P~~~~~~Wl---------------~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~ly  157 (236)
T 1tl2_A          115 PQSDTDNWI---------------ARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFY  157 (236)
T ss_dssp             CCSTTCCHH---------------HHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred             CcCCCCcee---------------ccccEeccCCCCceEEEEECCCceEEEEe--CCcEE
Confidence            321110000               0000000  01268999999999877666  67644

>3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus}

Probab=87.03  E-value=0.16  Score=49.15  Aligned_cols=76  Identities=17%  Similarity=0.232  Sum_probs=0.0

Q ss_pred             CCcccchhhhhhcccccccceeecccCccccccCcccCcCCccceeeeecccchhhhhhhhcCCcccccccccccCCCCC
Q psy7108         410 DTKFLPPTLFARMRTRGYDIWLWNARGNVYSREHVNLTSEQNKFYRFSCDFNVYTLELISRLGPLRIKPKVEKMETGSSD  489 (703)
Q Consensus       410 ~~~~sl~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  489 (703)
                      +.......+...+. +||.|+..|.||...|....                                             
T Consensus        34 ~~~~~~~~~~~~l~-~~~~vi~~d~~G~G~S~~~~---------------------------------------------   67 (262)
T 3r0v_A           34 STRAGGAPLAERLA-PHFTVICYDRRGRGDSGDTP---------------------------------------------   67 (262)
T ss_dssp             CCGGGGHHHHHHHT-TTSEEEEECCTTSTTCCCCS---------------------------------------------
T ss_pred             cChHHHHHHHHHHh-cCcEEEEEecCCCcCCCCCC---------------------------------------------


Q ss_pred             CcCCCcccceeecccCcCCCCCCccccccCchhhhhcccCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCc
Q psy7108         490 EESSKDDETEIRVLDEDVPRSSDTGDIQLKSTRMNELGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRP  567 (703)
Q Consensus       490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~  567 (703)
                                                         ...+.|..+.+..+++.-+ .++.++|||+||..++....+.|
T Consensus        68 -----------------------------------~~~~~~~~~~~~~~~~~l~-~~~~l~G~S~Gg~ia~~~a~~~p  109 (262)
T 3r0v_A           68 -----------------------------------PYAVEREIEDLAAIIDAAG-GAAFVFGMSSGAGLSLLAAASGL  109 (262)
T ss_dssp             -----------------------------------SCCHHHHHHHHHHHHHHTT-SCEEEEEETHHHHHHHHHHHTTC
T ss_pred             -----------------------------------CCCHHHHHHHHHHHHHhcC-CCeEEEEEcHHHHHHHHHHHhCC

>3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP}

Probab=87.02  E-value=0.22  Score=51.13  Aligned_cols=51  Identities=24%  Similarity=0.230  Sum_probs=41.8

Q ss_pred             cchHHHHHHHHhhC--CCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccc
Q psy7108         611 YDTTATIDYILNQT--GHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  665 (703)
Q Consensus       611 ~d~pa~i~~i~~~t--~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~  665 (703)
                      .|+.+.++++....  +..++.++|||+|+.+++.++...|+    |+.+++++|+.
T Consensus       182 ~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~----v~~~vl~~p~~  234 (346)
T 3fcy_A          182 LDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPR----VRKVVSEYPFL  234 (346)
T ss_dssp             HHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTT----CCEEEEESCSS
T ss_pred             HHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhCcc----ccEEEECCCcc
Confidence            57888999987765  34689999999999999998888775    77888888863

>3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum}

Probab=87.01  E-value=0.41  Score=45.45  Aligned_cols=37  Identities=27%  Similarity=0.264  Sum_probs=33.2

Q ss_pred             ceEEEEeChhHHHHHHHhcC-CchHHHHHHHheecccccccC
Q psy7108         628 SLITLGHSLGTTNVLIAGSL-RPEYQTKVRLNVLWAQSAFLG  668 (703)
Q Consensus       628 ~~~~vg~s~g~~~~~~~~s~-~~~~~~~i~~~~~l~p~~~~~  668 (703)
                      +++++|||+|+.+++.++.. +|+    ++.+++++|.....
T Consensus        85 ~~~l~G~S~Gg~~a~~~a~~~~p~----v~~lvl~~~~~~~~  122 (245)
T 3e0x_A           85 NITLIGYSMGGAIVLGVALKKLPN----VRKVVSLSGGARFD  122 (245)
T ss_dssp             CEEEEEETHHHHHHHHHHTTTCTT----EEEEEEESCCSBCT
T ss_pred             ceEEEEeChhHHHHHHHHHHhCcc----ccEEEEecCCCccc
Confidence            89999999999999999998 887    88999999987663

>1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A*

Probab=86.94  E-value=0.076  Score=52.51  Aligned_cols=80  Identities=14%  Similarity=0.105  Sum_probs=0.0

Q ss_pred             CCcccchhhhhhcccccccceeecccCccccccCcccCcCCccceeeeecccchhhhhhhhcCCcccccccccccCCCCC
Q psy7108         410 DTKFLPPTLFARMRTRGYDIWLWNARGNVYSREHVNLTSEQNKFYRFSCDFNVYTLELISRLGPLRIKPKVEKMETGSSD  489 (703)
Q Consensus       410 ~~~~sl~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  489 (703)
                      +.......+...+.++||.|...|.||...|..-..                                            
T Consensus        34 ~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~--------------------------------------------   69 (279)
T 1hkh_A           34 LDGHSWERQTRELLAQGYRVITYDRRGFGGSSKVNT--------------------------------------------   69 (279)
T ss_dssp             CCGGGGHHHHHHHHHTTEEEEEECCTTSTTSCCCSS--------------------------------------------
T ss_pred             chhhHHhhhHHHHHhCCcEEEEeCCCCCCCCCCCCC--------------------------------------------


Q ss_pred             CcCCCcccceeecccCcCCCCCCccccccCchhhhhcccCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCch
Q psy7108         490 EESSKDDETEIRVLDEDVPRSSDTGDIQLKSTRMNELGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPE  568 (703)
Q Consensus       490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~  568 (703)
                                                         ...+.+..+.+..++..-+..++.++|||+||..++....+.|+
T Consensus        70 -----------------------------------~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~  113 (279)
T 1hkh_A           70 -----------------------------------GYDYDTFAADLHTVLETLDLRDVVLVGFSMGTGELARYVARYGH  113 (279)
T ss_dssp             -----------------------------------CCSHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHHCS
T ss_pred             -----------------------------------CCCHHHHHHHHHHHHHhcCCCceEEEEeChhHHHHHHHHHHcCc

>2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A*

Probab=86.91  E-value=0.046  Score=56.62  Aligned_cols=82  Identities=15%  Similarity=0.052  Sum_probs=0.0

Q ss_pred             chhhhhhcccccccceeecccCccccccCcccCcCCccceeeeecccchhhhhhhhcCCcccccccccccCCCCCCcCCC
Q psy7108         415 PPTLFARMRTRGYDIWLWNARGNVYSREHVNLTSEQNKFYRFSCDFNVYTLELISRLGPLRIKPKVEKMETGSSDEESSK  494 (703)
Q Consensus       415 l~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  494 (703)
                      ...+.++   +||.|...|.||          .++..-                                          
T Consensus       138 ~~~la~~---~g~~vv~~d~rg----------~~~~~~------------------------------------------  162 (351)
T 2zsh_A          138 CRRLVGL---CKCVVVSVNYRR----------APENPY------------------------------------------  162 (351)
T ss_dssp             HHHHHHH---HTSEEEEECCCC----------TTTSCT------------------------------------------
T ss_pred             HHHHHHH---cCCEEEEecCCC----------CCCCCC------------------------------------------


Q ss_pred             cccceeecccCcCCCCCCccccccCchhhhhcccCCchhhHHHhHccC------CCc-ceEEEEEecCceeeeeccCCCc
Q psy7108         495 DDETEIRVLDEDVPRSSDTGDIQLKSTRMNELGLYDTTATIDYILNQT------GHN-SLITLGHSLGTTNVLIAGSLRP  567 (703)
Q Consensus       495 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~~~~~~i~~~~------~~~-~~~~~g~S~G~~~~~~~~~~~~  567 (703)
                                                    ...+.|+.++++|+....      +.+ +++++|||+||..++....+.+
T Consensus       163 ------------------------------~~~~~D~~~~~~~l~~~~~~~~~~d~~~~i~l~G~S~GG~la~~~a~~~~  212 (351)
T 2zsh_A          163 ------------------------------PCAYDDGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAG  212 (351)
T ss_dssp             ------------------------------THHHHHHHHHHHHHHTCGGGCCTTTSSCEEEEEEETHHHHHHHHHHHHHH
T ss_pred             ------------------------------chhHHHHHHHHHHHHhCchhhcCCCCCCcEEEEEeCcCHHHHHHHHHHhh


Q ss_pred             hhhhhHHHhhhhhh
Q psy7108         568 EYQTKVRLNVLWAQ  581 (703)
Q Consensus       568 ~~~~~~~~~~~~~p  581 (703)
                      +...+++..++.+|
T Consensus       213 ~~~~~v~~~vl~~p  226 (351)
T 2zsh_A          213 ESGIDVLGNILLNP  226 (351)
T ss_dssp             TTTCCCCEEEEESC
T ss_pred             ccCCCeeEEEEECC

>3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans}

Probab=86.90  E-value=0.26  Score=48.75  Aligned_cols=46  Identities=15%  Similarity=0.049  Sum_probs=35.8

Q ss_pred             HHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccc
Q psy7108         616 TIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS  664 (703)
Q Consensus       616 ~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~  664 (703)
                      .+.-++...+..+++++|||+|+.+++.++..+|+   +++.+++++|.
T Consensus        99 ~l~~~l~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~  144 (292)
T 3l80_A           99 AILMIFEHFKFQSYLLCVHSIGGFAALQIMNQSSK---ACLGFIGLEPT  144 (292)
T ss_dssp             HHHHHHHHSCCSEEEEEEETTHHHHHHHHHHHCSS---EEEEEEEESCC
T ss_pred             HHHHHHHHhCCCCeEEEEEchhHHHHHHHHHhCch---heeeEEEECCC
Confidence            34445555677789999999999999999888776   57778888854

>1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12

Probab=86.80  E-value=0.1  Score=51.35  Aligned_cols=80  Identities=11%  Similarity=0.074  Sum_probs=0.0

Q ss_pred             CCcccchhhhhhcccccccceeecccCccccccCcccCcCCccceeeeecccchhhhhhhhcCCcccccccccccCCCCC
Q psy7108         410 DTKFLPPTLFARMRTRGYDIWLWNARGNVYSREHVNLTSEQNKFYRFSCDFNVYTLELISRLGPLRIKPKVEKMETGSSD  489 (703)
Q Consensus       410 ~~~~sl~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  489 (703)
                      +.......++..+.++||.|...|.||...|.....                                            
T Consensus        30 ~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~--------------------------------------------   65 (273)
T 1a8s_A           30 LNADSWESQMIFLAAQGYRVIAHDRRGHGRSSQPWS--------------------------------------------   65 (273)
T ss_dssp             CCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSS--------------------------------------------
T ss_pred             CcHHHHhhHHhhHhhCCcEEEEECCCCCCCCCCCCC--------------------------------------------


Q ss_pred             CcCCCcccceeecccCcCCCCCCccccccCchhhhhcccCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCC-ch
Q psy7108         490 EESSKDDETEIRVLDEDVPRSSDTGDIQLKSTRMNELGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLR-PE  568 (703)
Q Consensus       490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~-~~  568 (703)
                                                         ...+.+..+-+.-++..-+.+++.++|||+||..++...++. |+
T Consensus        66 -----------------------------------~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~  110 (273)
T 1a8s_A           66 -----------------------------------GNDMDTYADDLAQLIEHLDLRDAVLFGFSTGGGEVARYIGRHGTA  110 (273)
T ss_dssp             -----------------------------------CCSHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHHCST
T ss_pred             -----------------------------------CCCHHHHHHHHHHHHHHhCCCCeEEEEeChHHHHHHHHHHhcCch

>1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12

Probab=86.77  E-value=0.11  Score=51.00  Aligned_cols=37  Identities=16%  Similarity=0.167  Sum_probs=23.3

Q ss_pred             CCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhh
Q psy7108         543 GHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQ  581 (703)
Q Consensus       543 ~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p  581 (703)
                      +.+++.++|||+||..++..+.+.  ..++++.++..+|
T Consensus        84 ~~~~~~lvGhS~Gg~ia~~~a~~~--~p~~v~~lvl~~~  120 (274)
T 1a8q_A           84 DLRDVTLVAHSMGGGELARYVGRH--GTGRLRSAVLLSA  120 (274)
T ss_dssp             TCCSEEEEEETTHHHHHHHHHHHH--CSTTEEEEEEESC
T ss_pred             CCCceEEEEeCccHHHHHHHHHHh--hhHheeeeeEecC
Confidence            346899999999998765433321  0235665565554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	703
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	5e-13
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	7e-07
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	2e-05
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	1e-10
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	2e-10
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	2e-07
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	2e-06
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	2e-10
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	0.001
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	2e-09
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	7e-04
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	0.003
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	3e-09
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	2e-06
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	4e-05
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	5e-04
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	7e-09
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	2e-06
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	5e-05
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	2e-08
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	2e-04
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	0.002
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	4e-08
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	5e-05
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	9e-08
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	2e-07
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	2e-05
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	6e-05
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	9e-05
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	4e-07
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	6e-04
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	2e-06
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	5e-04
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	0.004
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	4e-06
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	0.002
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	4e-06
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	2e-04
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	6e-04
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	0.004
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	4e-06
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	2e-04
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	7e-04
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	1e-05
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	0.002
d1l0qa2	301	b.69.2.3 (A:1-301) Surface layer protein {Archaeon	9e-05
d1l0qa2	301	b.69.2.3 (A:1-301) Surface layer protein {Archaeon	0.003
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	2e-04
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	0.001
d1k8qa_	377	c.69.1.6 (A:) Gastric lipase {Dog (Canis familiari	7e-04

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 68.6 bits (166), Expect = 5e-13
 Identities = 21/142 (14%), Positives = 45/142 (31%), Gaps = 24/142 (16%)

Query: 42  VLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDA--LCVAY 99
             +GHE  ++ I F P  +     + S D T +L++                     V++
Sbjct: 221 TFTGHESDINAICFFP--NGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSF 278

Query: 100 KPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTV 159
              G  ++    D    ++D   A + G +    +                     VS +
Sbjct: 279 SKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDN--------------------RVSCL 318

Query: 160 CYSADGSCILAAGQSKYICIYS 181
             + DG  +       ++ I++
Sbjct: 319 GVTDDGMAVATGSWDSFLKIWN 340

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 49.7 bits (117), Expect = 7e-07
 Identities = 22/129 (17%), Positives = 44/129 (34%), Gaps = 18/129 (13%)

Query: 64  MVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESA 123
            VS + D + KLW+  E   +       SD   + + P+G      + D    +FD+ + 
Sbjct: 199 FVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRA- 257

Query: 124 AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSR 183
                            D +L+T         +++V +S  G  +LA        ++ + 
Sbjct: 258 -----------------DQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL 300

Query: 184 EGILLKKFT 192
           +        
Sbjct: 301 KADRAGVLA 309

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 44.7 bits (104), Expect = 2e-05
 Identities = 41/267 (15%), Positives = 80/267 (29%), Gaps = 40/267 (14%)

Query: 42  VLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKP 101
            L GH   +  + +     S  +VSAS D  + +W++  T+  H      S  +  AY P
Sbjct: 50  TLRGHLAKIYAMHWGT--DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAP 107

Query: 102 DGTEIVVATLDGQLIMFDVESAAQVGSVEARRD-------------------------LD 136
            G  +    LD    ++++++      V                                
Sbjct: 108 SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCA 167

Query: 137 SGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQN 196
              ++T   T   +     V ++  + D    ++        ++  REG+  + FT    
Sbjct: 168 LWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFT---- 223

Query: 197 KSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFC 256
               G    IN       GN          +     L      +  M          +  
Sbjct: 224 ----GHESDINAICFFPNGNAFAT----GSDDATCRLFDLRADQELMTYSHDNIICGITS 275

Query: 257 VKFSPTGQAWVAATTEG-VHIYSLDSG 282
           V FS +G+  +A   +   +++     
Sbjct: 276 VSFSKSGRLLLAGYDDFNCNVWDALKA 302

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 60.9 bits (146), Expect = 1e-10
 Identities = 42/273 (15%), Positives = 93/273 (34%), Gaps = 37/273 (13%)

Query: 42  VLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDAL------ 95
            LSGH  PV+ + F P    + MVSAS D T+K+W+  ET     T++  +D++      
Sbjct: 12  ALSGHRSPVTRVIFHP--VFSVMVSASEDATIKVWD-YETGDFERTLKGHTDSVQDISFD 68

Query: 96  -------------CVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDS----G 138
                         +          + T+ G        S    G        D      
Sbjct: 69  HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMW 128

Query: 139 RLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKS 198
            + T    +  +   + V  V  + DG+ I +    + + ++         +    +++ 
Sbjct: 129 EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL--REHRH 186

Query: 199 LDGINDFINRRKMTEFGNVSLIETRETHEGGNVV--------LKLPGVKKGDMAARVLKP 250
           +     +      +     +  ET+++ + G  +        +K+  V  G     ++  
Sbjct: 187 VVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH 246

Query: 251 EVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSG 282
           +  V  V F   G+  ++   +  + ++   + 
Sbjct: 247 DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 279

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 60.5 bits (145), Expect = 2e-10
 Identities = 13/79 (16%), Positives = 34/79 (43%), Gaps = 4/79 (5%)

Query: 42  VLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDA-LCVAYK 100
            L GH+  V  + F        ++S + DKT+++W+  +     +T+         + + 
Sbjct: 242 TLVGHDNWVRGVLFHS--GGKFILSCADDKTLRVWD-YKNKRCMKTLNAHEHFVTSLDFH 298

Query: 101 PDGTEIVVATLDGQLIMFD 119
                +V  ++D  + +++
Sbjct: 299 KTAPYVVTGSVDQTVKVWE 317

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 50.9 bits (120), Expect = 2e-07
 Identities = 17/159 (10%), Positives = 45/159 (28%), Gaps = 20/159 (12%)

Query: 22  VLKLPGVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVET 81
             +L   +              S                   ++S S DKT+K+W+    
Sbjct: 178 KAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG 237

Query: 82  DTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLD 141
                 +   +    V +   G  I+    D  L ++D ++   + ++ A          
Sbjct: 238 MCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEH------- 290

Query: 142 TDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIY 180
                         V+++ +      ++     + + ++
Sbjct: 291 -------------FVTSLDFHKTAPYVVTGSVDQTVKVW 316

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.2 bits (113), Expect = 2e-06
 Identities = 36/215 (16%), Positives = 69/215 (32%), Gaps = 15/215 (6%)

Query: 64  MVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESA 123
           +VSAS DKT+K+W                    V    DGT I   + D  + ++ V + 
Sbjct: 116 IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK 175

Query: 124 AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSR 183
                +   R +          +     +A    T      G  +L+  + K I ++   
Sbjct: 176 ECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 235

Query: 184 EGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDM 243
            G+ L         +L G ++++        G   L       +   +  ++   K    
Sbjct: 236 TGMCL--------MTLVGHDNWVRGVLFHSGGKFILS----CADDKTL--RVWDYKNKRC 281

Query: 244 AARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIY 277
              +   E  V  + F  T    V  + +  V ++
Sbjct: 282 MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 316

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 60.6 bits (145), Expect = 2e-10
 Identities = 11/71 (15%), Positives = 28/71 (39%), Gaps = 5/71 (7%)

Query: 41  EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLL---SDALCV 97
           ++    +  +S I+  P  S + ++  SWD ++ ++         + +Q L      LC 
Sbjct: 5   QIEQAPKDYISDIKIIP--SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCC 62

Query: 98  AYKPDGTEIVV 108
            +  +    + 
Sbjct: 63  NFIDNTDLQIY 73

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.4 bits (90), Expect = 0.001
 Identities = 8/97 (8%), Positives = 28/97 (28%), Gaps = 21/97 (21%)

Query: 86  ETIQLL---SDAL-CVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLD 141
           + +Q+     D +  +   P  + +++ + DG L ++  +  A+   +            
Sbjct: 2   QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKH---- 57

Query: 142 TDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYIC 178
                         +    +  +    +  G  +   
Sbjct: 58  -------------PLLCCNFIDNTDLQIYVGTVQGEI 81

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 57.9 bits (138), Expect = 2e-09
 Identities = 24/158 (15%), Positives = 53/158 (33%), Gaps = 28/158 (17%)

Query: 39  KPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDA---- 94
           + E  +GH+  V  + F+       +VS S D++VKLWN    + + ++    S      
Sbjct: 246 ENESGTGHKDSVYSVVFTR--DGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVT 303

Query: 95  --------LCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVT 146
                   L VA   +   I+  + D  ++ +D +S   +  ++            + V 
Sbjct: 304 YIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQG---------HRNSVI 354

Query: 147 REQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSRE 184
                     +      + +            I+  ++
Sbjct: 355 S-----VAVANGSSLGPEYNVFATGSGDCKARIWKYKK 387

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.2 bits (92), Expect = 7e-04
 Identities = 20/115 (17%), Positives = 42/115 (36%), Gaps = 7/115 (6%)

Query: 70  DKTVKLWNAVETD----TQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQ 125
           +    L+N           H+++   S   CV +  DG  +     +    ++ V   + 
Sbjct: 37  NDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSL 95

Query: 126 VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIY 180
           V  +    D  + +   +L T         + +VC+S DG  +    + + I I+
Sbjct: 96  VARLS--DDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIW 148

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.2 bits (87), Expect = 0.003
 Identities = 41/286 (14%), Positives = 89/286 (31%), Gaps = 53/286 (18%)

Query: 45  GHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDA---------- 94
            H   V C++FS        ++   +KT +++  V   +    +   S A          
Sbjct: 60  DHTSVVCCVKFSN---DGEYLATGCNKTTQVYR-VSDGSLVARLSDDSAANKDPENLNTS 115

Query: 95  ---------LCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRD----------- 134
                      V + PDG  +     D  + ++D+E+   V  ++               
Sbjct: 116 SSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSG 175

Query: 135 -----------LDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSR 183
                      +    L T   +   S++    +      DG  I A    + + ++ S 
Sbjct: 176 DKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSE 235

Query: 184 EGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETH------EGGNVVLKLPG 237
            G L+++   ++N+S  G  D +     T  G   +  + +        +  N       
Sbjct: 236 TGFLVERLD-SENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKT 294

Query: 238 VKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSG 282
              G      +  +  V  V  +   +  ++ + +  V  +   SG
Sbjct: 295 PNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSG 340

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.7 bits (135), Expect = 3e-09
 Identities = 15/75 (20%), Positives = 25/75 (33%), Gaps = 3/75 (4%)

Query: 46  HEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTE 105
           HE  V  ++F+        VS   D  +  W            +  S  L      D   
Sbjct: 264 HESCVLSLKFAY--CGKWFVSTGKDNLLNAWR-TPYGASIFQSKESSSVLSCDISVDDKY 320

Query: 106 IVVATLDGQLIMFDV 120
           IV  + D +  +++V
Sbjct: 321 IVTGSGDKKATVYEV 335

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.3 bits (113), Expect = 2e-06
 Identities = 15/79 (18%), Positives = 23/79 (29%), Gaps = 8/79 (10%)

Query: 45  GHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDA-----LCVAY 99
            H   V  +  S     T  V       VK+W+      +    QL              
Sbjct: 49  NHGEVVCAVTISN---PTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKL 105

Query: 100 KPDGTEIVVATLDGQLIMF 118
            PDG  ++V      L ++
Sbjct: 106 LPDGCTLIVGGEASTLSIW 124

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.0 bits (102), Expect = 4e-05
 Identities = 7/39 (17%), Positives = 12/39 (30%), Gaps = 2/39 (5%)

Query: 39  KPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWN 77
                S     V   + S       +V+ S DK   ++ 
Sbjct: 298 ASIFQSKESSSVLSCDISV--DDKYIVTGSGDKKATVYE 334

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.6 bits (93), Expect = 5e-04
 Identities = 15/137 (10%), Positives = 34/137 (24%), Gaps = 24/137 (17%)

Query: 45  GHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGT 104
                +  + + P       ++   + +      V    +++     S  L + +   G 
Sbjct: 222 DFTSQIFSLGYCPT---GEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGK 278

Query: 105 EIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD 164
             V    D  L  +     A +   +                        +V +   S D
Sbjct: 279 WFVSTGKDNLLNAWRTPYGASIFQSKES---------------------SSVLSCDISVD 317

Query: 165 GSCILAAGQSKYICIYS 181
              I+     K   +Y 
Sbjct: 318 DKYIVTGSGDKKATVYE 334

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 55.4 bits (131), Expect = 7e-09
 Identities = 9/63 (14%), Positives = 23/63 (36%), Gaps = 11/63 (17%)

Query: 42  VLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKP 101
            +SGH   ++ +  +P+      +S S+D  +  W++      H      +  + +    
Sbjct: 8   TISGHNKGITALTVNPL------ISGSYDGRIMEWSSSSMHQDHS-----NLIVSLDNSK 56

Query: 102 DGT 104
              
Sbjct: 57  AQE 59

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 48.0 bits (112), Expect = 2e-06
 Identities = 10/39 (25%), Positives = 20/39 (51%), Gaps = 3/39 (7%)

Query: 41  EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAV 79
           + L+ H+  V+ + +      + +VS+  D  +K WN V
Sbjct: 252 KALNAHKDGVNNLLWET---PSTLVSSGADACIKRWNVV 287

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.4 bits (100), Expect = 5e-05
 Identities = 7/71 (9%), Positives = 24/71 (33%), Gaps = 2/71 (2%)

Query: 51  SCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDA-LCVAYKPDGTEIVVA 109
                   +    + + S D  + +++        + +    D    + ++   T +V +
Sbjct: 217 EKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSS 275

Query: 110 TLDGQLIMFDV 120
             D  +  ++V
Sbjct: 276 GADACIKRWNV 286

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 54.2 bits (128), Expect = 2e-08
 Identities = 8/49 (16%), Positives = 18/49 (36%), Gaps = 3/49 (6%)

Query: 41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQ 89
          +V  GH   ++ +  S       + SA  +  +  W+ + T   +    
Sbjct: 6  QVRYGHNKAITALSSSA--DGKTLFSADAEGHINSWD-ISTGISNRVFP 51

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 41.5 bits (95), Expect = 2e-04
 Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 4/60 (6%)

Query: 64  MVSASWDKTVKLWNAVETDTQHETIQLLS---DALCVAYKPDGTEIVVATLDGQLIMFDV 120
           + + S D +V +WN +   + H  I   +    ++      + T IV A  D  +  ++V
Sbjct: 239 LATGSLDNSVIVWN-MNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNV 297

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 38.8 bits (88), Expect = 0.002
 Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 3/34 (8%)

Query: 44  SGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWN 77
           +     V+ + +      T +VSA  D  +K WN
Sbjct: 266 AHAMSSVNSVIWLN---ETTIVSAGQDSNIKFWN 296

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 53.7 bits (127), Expect = 4e-08
 Identities = 11/94 (11%), Positives = 28/94 (29%), Gaps = 17/94 (18%)

Query: 42  VLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDAL------ 95
               H+  +  +        +  VS S D  +K+W+    D ++   +  S  +      
Sbjct: 9   AGKAHDADIFSVSACN----SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLH 64

Query: 96  -------CVAYKPDGTEIVVATLDGQLIMFDVES 122
                        +   +   +  G L+ + +  
Sbjct: 65  HVDVLQAIERDAFELCLVATTSFSGDLLFYRITR 98

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.7 bits (101), Expect = 5e-05
 Identities = 34/290 (11%), Positives = 80/290 (27%), Gaps = 34/290 (11%)

Query: 23  LKLPGVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTG-----MVSASWDKTVKLWN 77
           LK+   K  D      K      H+  +  ++    +         + + S+   +  + 
Sbjct: 36  LKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYR 95

Query: 78  AVETDTQHETIQLLSDALCVAYKPDG---------------TEIVVATLDGQLIMFDVES 122
               D   + I    D L    K                    +V   + G   ++    
Sbjct: 96  ITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHP 155

Query: 123 AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSK---YICI 179
            A   +        S  L+           ++  ++V  S  G  ++A G +     I  
Sbjct: 156 FADESNSLTLN--WSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISE 211

Query: 180 YSSREGILLKKFTITQNKSLDGINDFINRRKMTEF------GNVSLIETRETHEGGNVVL 233
            S+   +   +   +   + + I       + +         +   I   ET  G  +  
Sbjct: 212 LSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGS 271

Query: 234 KLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSG 282
                     +         V  + F+ +G+   +A  +G +  + + + 
Sbjct: 272 LSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK 321

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 52.2 bits (123), Expect = 9e-08
 Identities = 12/99 (12%), Positives = 28/99 (28%), Gaps = 10/99 (10%)

Query: 42  VLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKP 101
            L       S        +      A     +  ++        +  ++ ++   +    
Sbjct: 271 PLESSILIYSVPVHGEFAAY--YQGAPEKGVLLKYDV----KTRKVTEVKNNLTDLRLSA 324

Query: 102 DGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRL 140
           D   ++V   DG++  F +E        E   + D   L
Sbjct: 325 DRKTVMVRKDDGKIYTFPLEK----PEDERTVETDKRPL 359

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 51.0 bits (120), Expect = 2e-07
 Identities = 13/79 (16%), Positives = 26/79 (32%), Gaps = 6/79 (7%)

Query: 44  SGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQL---LSDALCVAYK 100
           S    P+SC  ++     T +     +  V ++     +   +  +L         V + 
Sbjct: 4   SFLVEPISCHAWNK--DRTQIAICPNNHEVHIYE-KSGNKWVQVHELKEHNGQVTGVDWA 60

Query: 101 PDGTEIVVATLDGQLIMFD 119
           PD   IV    D    ++ 
Sbjct: 61  PDSNRIVTCGTDRNAYVWT 79

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 44.8 bits (104), Expect = 2e-05
 Identities = 9/36 (25%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 42 VLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWN 77
           L  H G V+ ++++P   S  +V+   D+   +W 
Sbjct: 46 ELKEHNGQVTGVDWAP--DSNRIVTCGTDRNAYVWT 79

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 43.7 bits (101), Expect = 6e-05
 Identities = 11/86 (12%), Positives = 30/86 (34%), Gaps = 18/86 (20%)

Query: 96  CVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKA 155
           C A+  D T+I +   + ++ +++              +L                    
Sbjct: 12  CHAWNKDRTQIAICPNNHEVHIYEKSG----NKWVQVHELKEHN--------------GQ 53

Query: 156 VSTVCYSADGSCILAAGQSKYICIYS 181
           V+ V ++ D + I+  G  +   +++
Sbjct: 54  VTGVDWAPDSNRIVTCGTDRNAYVWT 79

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 42.9 bits (99), Expect = 9e-05
 Identities = 8/52 (15%), Positives = 19/52 (36%), Gaps = 5/52 (9%)

Query: 42  VLSGHEGPVSCIEFSPVLSS--TGMVSASWDKTVKLWNAVETDTQHETIQLL 91
           + S H+  VS I       +  +   +   D  + +W+     +    ++ L
Sbjct: 320 LDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDV---RSLESALKDL 368

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 50.2 bits (118), Expect = 4e-07
 Identities = 17/130 (13%), Positives = 42/130 (32%), Gaps = 5/130 (3%)

Query: 19  GNVVLKLPGVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNA 78
            +      G+   D+    +    +   +        +P        +      ++ ++ 
Sbjct: 212 ADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNP----AKTRAFGAYNVLESFD- 266

Query: 79  VETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSG 138
           +E +   + + L      V    DG+ + +    G L  +D E+  + G V+   +    
Sbjct: 267 LEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGNASMS 326

Query: 139 RLDTDLVTRE 148
                L TR+
Sbjct: 327 LASVRLFTRD 336

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 40.2 bits (92), Expect = 6e-04
 Identities = 7/86 (8%), Positives = 25/86 (29%), Gaps = 5/86 (5%)

Query: 64  MVSASWDKTVKLWNAVETDTQHETIQLLSD---ALCVAYKPDGTEIVVA-TLDGQLIMFD 119
           +++ +    + + +  E     + I +       +     P G            L+  D
Sbjct: 4   ILAPARPDKLVVID-TEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKID 62

Query: 120 VESAAQVGSVEARRDLDSGRLDTDLV 145
           + +   +G ++     +  +      
Sbjct: 63  LVTGETLGRIDLSTPEERVKSLFGAA 88

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 47.6 bits (111), Expect = 2e-06
 Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 3/60 (5%)

Query: 64  MVSASWDKTVKLWNAVETDTQHETIQLLSDAL--CVAYKPDGTEIVVATLDGQLIMFDVE 121
           + SAS DKT+K+WN V T    +TI + +      +        +V  + +G +   + E
Sbjct: 253 IASASADKTIKIWN-VATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPE 311

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 40.3 bits (92), Expect = 5e-04
 Identities = 7/36 (19%), Positives = 14/36 (38%), Gaps = 2/36 (5%)

Query: 42 VLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWN 77
          + + H    +  + SP  S     S      V++W+
Sbjct: 53 IYTEHSHQTTVAKTSP--SGYYCASGDVHGNVRIWD 86

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 37.6 bits (85), Expect = 0.004
 Identities = 11/80 (13%), Positives = 23/80 (28%), Gaps = 5/80 (6%)

Query: 40  PEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDA-LCVA 98
           P +     G    +  +P  +   +   +   +V     V + T  E     S       
Sbjct: 10  PSLPRTARGTAVVLGNTP--AGDKIQYCN-GTSVYTVP-VGSLTDTEIYTEHSHQTTVAK 65

Query: 99  YKPDGTEIVVATLDGQLIMF 118
             P G       + G + ++
Sbjct: 66  TSPSGYYCASGDVHGNVRIW 85

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 47.2 bits (110), Expect = 4e-06
 Identities = 10/65 (15%), Positives = 24/65 (36%), Gaps = 7/65 (10%)

Query: 42  VLSGHEGPV-SCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDA-LCVAY 99
            L GH   V +C++F        +++ + DK +++++          +         + Y
Sbjct: 7   TLRGHMTSVITCLQFEDNY----VITGADDKMIRVYD-SINKKFLLQLSGHDGGVWALKY 61

Query: 100 KPDGT 104
              G 
Sbjct: 62  AHGGI 66

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.7 bits (88), Expect = 0.002
 Identities = 5/45 (11%), Positives = 13/45 (28%), Gaps = 3/45 (6%)

Query: 32  DMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLW 76
           ++ +  L    +      +  + F      T + +   D    L 
Sbjct: 309 NLRSGKLVHANILKDADQIWSVNFKG---KTLVAAVEKDGQSFLE 350

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.1 bits (110), Expect = 4e-06
 Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 7/65 (10%)

Query: 40  PEVLSGHEGPV-SCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDA-LCV 97
           P+VL GH+  V +C++F        +VS S D T+K+W+   T     T+   +      
Sbjct: 9   PKVLKGHDDHVITCLQFCGNR----IVSGSDDNTLKVWS-AVTGKCLRTLVGHTGGVWSS 63

Query: 98  AYKPD 102
             + +
Sbjct: 64  QMRDN 68

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.1 bits (97), Expect = 2e-04
 Identities = 25/159 (15%), Positives = 51/159 (32%), Gaps = 35/159 (22%)

Query: 42  VLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKP 101
            L GH   V  ++F  +     +VS S D ++++W+                +L    + 
Sbjct: 172 TLQGHTNRVYSLQFDGIH----VVSGSLDTSIRVWDV--ETGNCIHTLTGHQSLTSGMEL 225

Query: 102 DGTEIVVATLDGQLIMFDVESAAQVGSVEARR---------------------------- 133
               +V    D  + ++D+++   + +++                               
Sbjct: 226 KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLW 285

Query: 134 DLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG 172
           DL +G    +LVT E       V  +  S     + A G
Sbjct: 286 DLKTGEFIRNLVTLESGGSGGVVWRIRASNTK-LVCAVG 323

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.2 bits (92), Expect = 6e-04
 Identities = 32/226 (14%), Positives = 70/226 (30%), Gaps = 43/226 (19%)

Query: 64  MVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESA 123
           +VS ++D  VK+W+       H            + + DG  +V  +LD  + ++DVE+ 
Sbjct: 150 VVSGAYDFMVKVWDPETETCLHTLQG--HTNRVYSLQFDGIHVVSGSLDTSIRVWDVETG 207

Query: 124 AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSR 183
             +                       +L      T       + +++      + I+  +
Sbjct: 208 NCI----------------------HTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIK 245

Query: 184 EGILLKKFTITQNKSLDGINDFINRRKM---TEFGNVSLIETRETHEGGNVVLKLPGVKK 240
            G  L+                 N+  +   ++ G V L + +     G  +  L  ++ 
Sbjct: 246 TGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKT----GEFIRNLVTLES 301

Query: 241 GDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-----VHIYSLDS 281
           G     V       + ++ S T       +  G     + +   D 
Sbjct: 302 GGSGGVV-------WRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 340

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.9 bits (86), Expect = 0.004
 Identities = 15/74 (20%), Positives = 31/74 (41%), Gaps = 11/74 (14%)

Query: 46  HEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDA------LCVAY 99
           H+  V+C++F+       ++++S D TVKLW+ ++T      +  L           +  
Sbjct: 259 HQSAVTCLQFNKNF----VITSSDDGTVKLWD-LKTGEFIRNLVTLESGGSGGVVWRIRA 313

Query: 100 KPDGTEIVVATLDG 113
                   V + +G
Sbjct: 314 SNTKLVCAVGSRNG 327

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.8 bits (109), Expect = 4e-06
 Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 4/36 (11%)

Query: 42  VLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWN 77
            L  H G V  ++F        +VS+S D T+ +W+
Sbjct: 262 TLVEHSGRVFRLQFDE----FQIVSSSHDDTILIWD 293

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.4 bits (95), Expect = 2e-04
 Identities = 24/139 (17%), Positives = 51/139 (36%), Gaps = 19/139 (13%)

Query: 42  VLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKP 101
            L+GH+  ++C+++   L  +G      D T++LW+          +    + L    + 
Sbjct: 173 TLNGHKRGIACLQYRDRLVVSGS----SDNTIRLWDI--ECGACLRVLEGHEELVRCIRF 226

Query: 102 DGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCY 161
           D   IV    DG++ ++D+ +A    +      L +    +  V                
Sbjct: 227 DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVF-------------RL 273

Query: 162 SADGSCILAAGQSKYICIY 180
             D   I+++     I I+
Sbjct: 274 QFDEFQIVSSSHDDTILIW 292

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.8 bits (91), Expect = 7e-04
 Identities = 10/49 (20%), Positives = 18/49 (36%), Gaps = 5/49 (10%)

Query: 41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQ 89
             S     V C+++        +VS   D T+K+W+   T      + 
Sbjct: 9  HCRSETSKGVYCLQYD----DQKIVSGLRDNTIKIWD-KNTLECKRILT 52

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 45.9 bits (107), Expect = 1e-05
 Identities = 11/103 (10%), Positives = 32/103 (31%), Gaps = 4/103 (3%)

Query: 28  VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHET 87
               D+       +  +           SP               +  ++ ++     + 
Sbjct: 232 YLSVDLKTGKTHTQEFADLTELYFTGLRSP---KDPNQIYGVLNRLAKYD-LKQRKLIKA 287

Query: 88  IQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVE 130
             L     CVA+   G ++ +      L +F+ ++  +V +++
Sbjct: 288 ANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIK 330

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 38.6 bits (88), Expect = 0.002
 Identities = 11/70 (15%), Positives = 26/70 (37%), Gaps = 6/70 (8%)

Query: 57  PVLSSTG--MVSASWDKTVKLWNAVETDTQHETIQLLSDA--LCVAYKPDGTEIVVA-TL 111
           P L +    M+  ++   + + + V +DT +++  +            PD     V    
Sbjct: 2   PALKAGHEYMIVTNYPNNLHVVD-VASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH 60

Query: 112 DGQLIMFDVE 121
            G +   D++
Sbjct: 61  YGDIYGIDLD 70

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

 Score = 42.6 bits (98), Expect = 9e-05
 Identities = 12/59 (20%), Positives = 27/59 (45%), Gaps = 2/59 (3%)

Query: 65  VSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVA-TLDGQLIMFDVES 122
           ++ S    + + + V ++    TI + S+ +     PDGT++ VA      + + D  +
Sbjct: 6   IANSESDNISVID-VTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTAT 63

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

 Score = 37.9 bits (86), Expect = 0.003
 Identities = 14/86 (16%), Positives = 29/86 (33%), Gaps = 1/86 (1%)

Query: 46  HEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTE 105
            E   S I  +P  +   + +              T+     I +  D   +A  PDG +
Sbjct: 198 VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKK 257

Query: 106 IVVA-TLDGQLIMFDVESAAQVGSVE 130
           + VA +    + + D  +     ++ 
Sbjct: 258 VYVALSFCNTVSVIDTATNTITATMA 283

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.2 bits (97), Expect = 2e-04
 Identities = 13/62 (20%), Positives = 26/62 (41%), Gaps = 7/62 (11%)

Query: 64  MVSASWDKTVKLWNAVETDTQHETIQLLSD-----ALCVAYKPDGTEIVVATLDGQLIMF 118
             +   D T+++W+ V T    +   L         + V    +G  I+  +LDG L  +
Sbjct: 266 FATVGADATIRVWD-VTTSKCVQKWTLDKQQLGNQQVGVVATGNGR-IISLSLDGTLNFY 323

Query: 119 DV 120
           ++
Sbjct: 324 EL 325

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.1 bits (89), Expect = 0.001
 Identities = 11/75 (14%), Positives = 28/75 (37%), Gaps = 11/75 (14%)

Query: 43  LSGHEG-PVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDA------- 94
            +GH    V+ ++FSP+  S  + S      V        D +  ++++   +       
Sbjct: 58  FTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVI-VWGWTFDKESNSVEVNVKSEFQVLAG 116

Query: 95  --LCVAYKPDGTEIV 107
               +++  +G  + 
Sbjct: 117 PISDISWDFEGRRLC 131

>d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} Length = 377

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Gastric lipase
domain: Gastric lipase
species: Dog (Canis familiaris) [TaxId: 9615]

 Score = 40.1 bits (92), Expect = 7e-04
 Identities = 24/80 (30%), Positives = 38/80 (47%)

Query: 508 PRSSDTGDIQLKSTRMNELGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRP 567
                   ++  +   +E+  YD  ATID+IL +TG + L  +GHS GTT   IA S  P
Sbjct: 108 NLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNP 167

Query: 568 EYQTKVRLNVLWAQSAFLGN 587
           +   +++     A  A +  
Sbjct: 168 KLAKRIKTFYALAPVATVKY 187

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	703
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	99.97
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	99.97
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	99.97
d1tbga_	340	beta1-subunit of the signal-transducing G protein	99.97
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	99.96
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	99.95
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	99.95
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	99.95
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	99.95
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	99.95
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	99.95
d1tbga_	340	beta1-subunit of the signal-transducing G protein	99.95
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	99.95
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	99.94
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	99.92
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	99.9
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	99.9
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	99.9
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	99.9
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	99.9
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	99.9
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	99.88
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	99.87
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	99.86
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	99.84
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	99.84
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	99.83
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.83
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.83
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.8
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.77
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	99.76
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.76
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.75
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.72
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.7
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.68
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.68
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.64
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.62
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.62
d1k8qa_	377	Gastric lipase {Dog (Canis familiaris) [TaxId: 961	99.52
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.5
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.5
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.44
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.4
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.37
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.3
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.08
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	99.04
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	98.95
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	98.9
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	98.85
d1k8qa_	377	Gastric lipase {Dog (Canis familiaris) [TaxId: 961	98.8
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	98.78
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	98.74
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	98.71
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	98.71
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	98.57
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	98.51
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	98.43
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	98.43
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	98.37
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	98.33
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	98.32
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	98.3
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	98.29
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	98.25
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	98.2
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	98.14
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	98.1
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	98.04
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	97.9
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	97.27
d1tcaa_	317	Triacylglycerol lipase {Yeast (Candida antarctica)	97.07
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	96.96
d1tcaa_	317	Triacylglycerol lipase {Yeast (Candida antarctica)	96.91
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	96.79
d1thta_	302	Myristoyl-ACP-specific thioesterase {Vibrio harvey	96.74
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	96.46
d1thta_	302	Myristoyl-ACP-specific thioesterase {Vibrio harvey	96.29
d1cvla_	319	Lipase {Chromobacterium viscosum [TaxId: 42739]}	96.01
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	96.0
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	95.78
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	95.78
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	95.61
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	95.48
d2fuka1	218	XC6422 protein {Xanthomonas campestris [TaxId: 339	95.13
d1ispa_	179	Lipase A {Bacillus subtilis [TaxId: 1423]}	94.79
d1xfda2	258	Dipeptidyl aminopeptidase-like protein 6, DPP6, C-	94.62
d1cvla_	319	Lipase {Chromobacterium viscosum [TaxId: 42739]}	94.44
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	94.29
d1b6ga_	310	Haloalkane dehalogenase {Xanthobacter autotrophicu	94.28
d1mpxa2	381	Alpha-amino acid ester hydrolase {Xanthomonas citr	93.92
d1q0ra_	297	Aclacinomycin methylesterase RdmC {Streptomyces pu	93.74
d1ispa_	179	Lipase A {Bacillus subtilis [TaxId: 1423]}	93.54
d2b9va2	385	Alpha-amino acid ester hydrolase {Acetobacter past	93.47
d1azwa_	313	Proline iminopeptidase {Xanthomonas campestris, pv	93.33
d1imja_	208	Ccg1/TafII250-interacting factor B (Cib) {Human (H	93.29
d1xipa_	381	Nucleoporin NUP159 {Baker's yeast (Saccharomyces c	93.02
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	92.61
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	92.36
d1azwa_	313	Proline iminopeptidase {Xanthomonas campestris, pv	92.29
d1zd3a2	322	Mammalian epoxide hydrolase, C-terminal domain {Hu	92.14
d2jbwa1	360	2,6-dihydropseudooxynicotine hydrolase {Arthrobact	91.79
d1b6ga_	310	Haloalkane dehalogenase {Xanthobacter autotrophicu	91.54
d1ex9a_	285	Lipase {Pseudomonas aeruginosa [TaxId: 287]}	91.33
d1c4xa_	281	2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas	91.11
d1lnsa3	405	X-Prolyl dipeptidyl aminopeptidase PepX, middle do	91.1
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	90.73
d1pjaa_	268	Palmitoyl protein thioesterase 2 {Human (Homo sapi	90.66
d1mtza_	290	Tricorn interacting factor F1 {Archaeon Thermoplas	90.24
d1ju3a2	347	Bacterial cocaine esterase N-terminal domain {Rhod	89.97
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	89.92
d1v04a_	340	Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory	89.83
d1v04a_	340	Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory	89.79
d2rhwa1	283	2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas	89.74
d1q0ra_	297	Aclacinomycin methylesterase RdmC {Streptomyces pu	89.66
d1ex9a_	285	Lipase {Pseudomonas aeruginosa [TaxId: 287]}	89.5
d1a8qa_	274	Bromoperoxidase A1 {Streptomyces aureofaciens [Tax	89.45
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	89.39
d3c70a1	256	Hydroxynitrile lyase {Rubber tree (Hevea brasilien	88.99
d1c4xa_	281	2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas	88.97
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	88.97
d2bgra2	258	Dipeptidyl peptidase IV/CD26, C-terminal domain {P	88.87
d1imja_	208	Ccg1/TafII250-interacting factor B (Cib) {Human (H	88.81
d1mtza_	290	Tricorn interacting factor F1 {Archaeon Thermoplas	88.73
d1ehya_	293	Bacterial epoxide hydrolase {Agrobacterium radioba	88.47
d1r3da_	264	Hypothetical protein VC1974 {Vibrio cholerae [TaxI	88.38
d2hu7a2	260	Acylamino-acid-releasing enzyme, C-terminal donain	88.06
d1brta_	277	Bromoperoxidase A2 {Streptomyces aureofaciens [Tax	88.04
d1uk8a_	271	Meta-cleavage product hydrolase CumD {Pseudomonas	88.01
d2rhwa1	283	2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas	87.84
d2fuka1	218	XC6422 protein {Xanthomonas campestris [TaxId: 339	87.75
d1brta_	277	Bromoperoxidase A2 {Streptomyces aureofaciens [Tax	87.66
d1ei9a_	279	Palmitoyl protein thioesterase 1 {Cow (Bos taurus)	87.39
d1hkha_	279	Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]	87.32
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	87.12
d1uxoa_	186	Hypothetical protein YdeN {Bacillus subtilis [TaxI	87.01
d1tqha_	242	Carboxylesterase Est {Bacillus stearothermophilus	86.92
d1ehya_	293	Bacterial epoxide hydrolase {Agrobacterium radioba	86.92
d1j1ia_	268	Meta cleavage compound hydrolase CarC {Janthinobac	86.91
d1bn7a_	291	Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1	86.82
d1r3da_	264	Hypothetical protein VC1974 {Vibrio cholerae [TaxI	86.78
d1ufoa_	238	Hypothetical protein TT1662 {Thermus thermophilus	86.35
d1uk8a_	271	Meta-cleavage product hydrolase CumD {Pseudomonas	86.31
d1vlqa_	322	Acetyl xylan esterase TM0077 {Thermotoga maritima	86.05
d1vkha_	263	Putative serine hydrolase Ydr428c {Baker's yeast (	86.01
d1pjaa_	268	Palmitoyl protein thioesterase 2 {Human (Homo sapi	85.95
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	85.68
d2jbwa1	360	2,6-dihydropseudooxynicotine hydrolase {Arthrobact	85.31
d1xkla_	258	Salicylic acid-binding protein 2 (SABP2) {Common t	85.19
d1bn7a_	291	Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1	85.19
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	85.18
d1j1ia_	268	Meta cleavage compound hydrolase CarC {Janthinobac	85.06
d1crua_	450	Soluble quinoprotein glucose dehydrogenase {Acinet	84.79
d1a8qa_	274	Bromoperoxidase A1 {Streptomyces aureofaciens [Tax	84.77
d3c70a1	256	Hydroxynitrile lyase {Rubber tree (Hevea brasilien	84.36
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	84.35
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	84.34
d2pbla1	261	Uncharacterized protein TM1040_2492 {Silicibacter	84.03
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	83.97
d1crua_	450	Soluble quinoprotein glucose dehydrogenase {Acinet	83.35
d3b5ea1	209	Uncharacterized protein Mll8374 {Mesorhizobium lot	83.29
d1m33a_	256	Biotin biosynthesis protein BioH {Escherichia coli	82.71
d1mj5a_	298	Haloalkane dehalogenase {Sphingomonas paucimobilis	82.11
d1jmkc_	230	Surfactin synthetase, SrfA {Bacillus subtilis [Tax	80.82
d1mj5a_	298	Haloalkane dehalogenase {Sphingomonas paucimobilis	80.7
d1wm1a_	313	Proline aminopeptidase {Serratia marcescens [TaxId	80.19

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.97  E-value=2e-30  Score=268.69  Aligned_cols=250  Identities=13%  Similarity=0.181  Sum_probs=207.1

Q ss_pred             ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCcee--EEEecCCCcEEEEEEecCCC
Q psy7108          28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQ--HETIQLLSDALCVAYKPDGT  104 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~--~~~~~~~~~V~~v~~spdg~  104 (703)
                      +.+|+ .+++..  +++.+|.+.|++++|+|  +|++||+|+.||+|++||+.++...  ..+..|.++|.+++|+|+++
T Consensus        40 v~i~~~~~~~~~--~~~~~H~~~v~~~~~sp--~g~~latg~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~v~~s~d~~  115 (311)
T d1nr0a1          40 VYTVPVGSLTDT--EIYTEHSHQTTVAKTSP--SGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESK  115 (311)
T ss_dssp             EEEEETTCSSCC--EEECCCSSCEEEEEECT--TSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSC
T ss_pred             EEEEECCCCcee--EEEcCCCCCEEEEEEeC--CCCeEeccccCceEeeeeeeccccccccccccccCcccccccccccc
Confidence            44555 356676  88999999999999999  9999999999999999999887644  34556899999999999999


Q ss_pred             EEEEEEC--CCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCE-EEEEecCCcEEEEE
Q psy7108         105 EIVVATL--DGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSC-ILAAGQSKYICIYS  181 (703)
Q Consensus       105 ~las~s~--dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~-l~s~s~dg~I~lwD  181 (703)
                      +|++++.  +..+++|++++++....+.+|..                    .|++++|+|++++ +++|+.|+.|++||
T Consensus       116 ~l~~~~~~~~~~~~v~~~~~~~~~~~l~~h~~--------------------~v~~v~~~~~~~~~l~sgs~d~~i~i~d  175 (311)
T d1nr0a1         116 RIAAVGEGRERFGHVFLFDTGTSNGNLTGQAR--------------------AMNSVDFKPSRPFRIISGSDDNTVAIFE  175 (311)
T ss_dssp             EEEEEECCSSCSEEEEETTTCCBCBCCCCCSS--------------------CEEEEEECSSSSCEEEEEETTSCEEEEE
T ss_pred             cccccccccccccccccccccccccccccccc--------------------ccccccccccceeeeccccccccccccc
Confidence            9999886  45699999999887777766654                    8999999999885 77899999999999


Q ss_pred             CCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceee-------cCCccce
Q psy7108         182 SREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARV-------LKPEVRV  254 (703)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~-------~~h~~~V  254 (703)
                      +++++....+..+.        ..|.++.++|+++.+++++.++      .+++||..+++....+       .+|...|
T Consensus       176 ~~~~~~~~~~~~~~--------~~i~~v~~~p~~~~l~~~~~d~------~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V  241 (311)
T d1nr0a1         176 GPPFKFKSTFGEHT--------KFVHSVRYNPDGSLFASTGGDG------TIVLYNGVDGTKTGVFEDDSLKNVAHSGSV  241 (311)
T ss_dssp             TTTBEEEEEECCCS--------SCEEEEEECTTSSEEEEEETTS------CEEEEETTTCCEEEECBCTTSSSCSSSSCE
T ss_pred             cccccccccccccc--------ccccccccCccccccccccccc------cccccccccccccccccccccccccccccc
Confidence            99998887766544        4899999999999998887664      7999999887655443       3578899


Q ss_pred             EEEEEcCCCCEEEEEeCCC-EEEEEcCCCceeccee-------eeEEEccchhhhHhhcCCcceEEEEEEec
Q psy7108         255 FCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPFL-------LDISITPQSVKEALADKDYAKALMMSLKL  318 (703)
Q Consensus       255 ~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~~-------~~~~~spd~~~~~l~sg~~~~~l~la~~l  318 (703)
                      .+++|+|++++|++|+.|| |+|||+.++++...+.       ..+.+.+++  ..+++++.++.+.+ |+.
T Consensus       242 ~~~~~s~~~~~l~tgs~Dg~v~iwd~~t~~~~~~l~~~~~~~~~~~~~~~~~--~~l~s~s~dG~i~~-wd~  310 (311)
T d1nr0a1         242 FGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTK--QALVSISANGFINF-VNP  310 (311)
T ss_dssp             EEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECS--SCEEEEETTCCEEE-EET
T ss_pred             cccccCCCCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCccceEEEEEecC--CEEEEEECCCEEEE-EeC
Confidence            9999999999999999999 9999999998866543       223444555  45778888999998 875

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=2.4e-29  Score=256.79  Aligned_cols=247  Identities=15%  Similarity=0.213  Sum_probs=196.9

Q ss_pred             eeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEE
Q psy7108          30 KGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVA  109 (703)
Q Consensus        30 ~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~  109 (703)
                      .|-......  .+|+||+++|++++|+|  ++++|+||+.||+|+|||+.+++....+..|.+.|.+++|+|++..++++
T Consensus         2 ~w~p~~~~~--~~L~GH~~~I~~l~~sp--~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~   77 (317)
T d1vyhc1           2 EWIPRPPEK--YALSGHRSPVTRVIFHP--VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASC   77 (317)
T ss_dssp             CCCCCSSCS--CEEECCSSCEEEEEECS--SSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred             ccCCCCCcc--EEEcCCCCCeEEEEEcC--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCcEEEEeeeccccccccc
Confidence            344445555  78999999999999999  99999999999999999999887777776677777777777766655555


Q ss_pred             ECC------------------------------------------CeEEEEEcCCCcEEEEEeccccCCCCCCCCccchh
Q psy7108         110 TLD------------------------------------------GQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTR  147 (703)
Q Consensus       110 s~d------------------------------------------g~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (703)
                      +.+                                          +.+++||+++++....+.+                
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~----------------  141 (317)
T d1vyhc1          78 SADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG----------------  141 (317)
T ss_dssp             ETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEEC----------------
T ss_pred             ccccccccccccccccccccccccccceeeeccCCCceEEeeccCcceeEeecccceeeeEEcc----------------
Confidence            544                                          4455555554444444444                


Q ss_pred             hcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccC-------------
Q psy7108         148 EQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEF-------------  214 (703)
Q Consensus       148 ~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spd-------------  214 (703)
                          |...+.+++|+|++++|++++.|+.|++|++.+++....+..+..        .+.++.++|+             
T Consensus       142 ----~~~~~~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~--------~i~~~~~~~~~~~~~~~~~~~~~  209 (317)
T d1vyhc1         142 ----HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRH--------VVECISWAPESSYSSISEATGSE  209 (317)
T ss_dssp             ----CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSS--------CEEEEEECCSCGGGGGGGCCSCC
T ss_pred             ----CCCcceeeecccCCCEEEEEeCCCeEEEEeeccceeeEEEecCCC--------CceEEEEeeccccceeeccccce
Confidence                344899999999999999999999999999999988887765443        4555555544             


Q ss_pred             -------CCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceec
Q psy7108         215 -------GNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFD  286 (703)
Q Consensus       215 -------g~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~  286 (703)
                             +..+++++.+      ..+++||.++++++..+.+|...|.+++|+|++++|++++.|| |++||+.+++.+.
T Consensus       210 ~~~~~~~~~~~~~~~~d------~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~  283 (317)
T d1vyhc1         210 TKKSGKPGPFLLSGSRD------KTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK  283 (317)
T ss_dssp             -------CCEEEEEETT------SEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCE
T ss_pred             eeeeccCCceeEeccCC------CEEEEEECCCCcEEEEEeCCCCCEEEEEECCCCCEEEEEECCCeEEEEECCCCcEEE
Confidence                   3445555544      3899999999999999999999999999999999999999999 9999999988754


Q ss_pred             ce------eeeEEEccchhhhHhhcCCcceEEEEEEe
Q psy7108         287 PF------LLDISITPQSVKEALADKDYAKALMMSLK  317 (703)
Q Consensus       287 ~~------~~~~~~spd~~~~~l~sg~~~~~l~la~~  317 (703)
                      .+      +.+++|+|++  .+|++++.|+.+++ |+
T Consensus       284 ~~~~h~~~V~~~~~s~~~--~~l~s~s~Dg~i~i-Wd  317 (317)
T d1vyhc1         284 TLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKV-WE  317 (317)
T ss_dssp             EEECCSSCEEEEEECSSS--SCEEEEETTSEEEE-EC
T ss_pred             EEcCCCCCEEEEEEcCCC--CEEEEEeCCCeEEE-eC
Confidence            44      4678999999  88999999999987 74

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1e-28  Score=258.31  Aligned_cols=236  Identities=15%  Similarity=0.229  Sum_probs=206.3

Q ss_pred             cccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc--eeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEE
Q psy7108          42 VLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD--TQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFD  119 (703)
Q Consensus        42 ~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~--~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd  119 (703)
                      ...+|.+.|++++|+|  ++++|++|+.||+|++||+....  .......|...+.+++|+|++..+++++.|+.|++||
T Consensus        92 ~~~~h~~~I~~v~~s~--dg~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~  169 (337)
T d1gxra_          92 DCLNRDNYIRSCKLLP--DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWD  169 (337)
T ss_dssp             ECSCTTSBEEEEEECT--TSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             eecCCCCcEEEEEEcC--CCCEEEEeeccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            3458999999999999  99999999999999999987543  3344556888999999999999999999999999999


Q ss_pred             cCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCcc
Q psy7108         120 VESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSL  199 (703)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~  199 (703)
                      +.+++.......|..                    .|.+++|++++..+++++.|+.+++||+++++.+..+.       
T Consensus       170 ~~~~~~~~~~~~~~~--------------------~v~~l~~s~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~-------  222 (337)
T d1gxra_         170 LHNQTLVRQFQGHTD--------------------GASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-------  222 (337)
T ss_dssp             TTTTEEEEEECCCSS--------------------CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-------
T ss_pred             ccccccccccccccc--------------------ccccccccccccccccccccccccccccccceeecccc-------
Confidence            999998887777654                    89999999999999999999999999999998887764       


Q ss_pred             ccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEE
Q psy7108         200 DGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYS  278 (703)
Q Consensus       200 ~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd  278 (703)
                        +...|.+++|+|+++.+++++.++      .+++||+++++.. ....|...|.+++|+|++++|++++.|+ |++||
T Consensus       223 --~~~~i~~l~~~~~~~~l~~~~~d~------~i~i~d~~~~~~~-~~~~~~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd  293 (337)
T d1gxra_         223 --FTSQIFSLGYCPTGEWLAVGMESS------NVEVLHVNKPDKY-QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWR  293 (337)
T ss_dssp             --CSSCEEEEEECTTSSEEEEEETTS------CEEEEETTSSCEE-EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred             --cccceEEEEEcccccccceecccc------ccccccccccccc-cccccccccceEEECCCCCEEEEEeCCCeEEEEE
Confidence              334789999999999999877764      7999999888754 5567899999999999999999999999 99999


Q ss_pred             cCCCceecce-----eeeEEEccchhhhHhhcCCcceEEEEEEec
Q psy7108         279 LDSGYVFDPF-----LLDISITPQSVKEALADKDYAKALMMSLKL  318 (703)
Q Consensus       279 ~~~~~~~~~~-----~~~~~~spd~~~~~l~sg~~~~~l~la~~l  318 (703)
                      +.+++.+...     ..+++|+|++  .+|++++.|+.+++ |++
T Consensus       294 ~~~~~~~~~~~~~~~v~~~~~s~d~--~~l~t~s~D~~I~v-Wdl  335 (337)
T d1gxra_         294 TPYGASIFQSKESSSVLSCDISVDD--KYIVTGSGDKKATV-YEV  335 (337)
T ss_dssp             TTTCCEEEEEECSSCEEEEEECTTS--CEEEEEETTSCEEE-EEE
T ss_pred             CCCCCEEEEccCCCCEEEEEEeCCC--CEEEEEeCCCeEEE-EEE
Confidence            9998875443     3678999999  78999999999998 875

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.97  E-value=1.3e-28  Score=255.13  Aligned_cols=261  Identities=17%  Similarity=0.203  Sum_probs=212.9

Q ss_pred             CccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeE
Q psy7108          36 RVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQL  115 (703)
Q Consensus        36 ~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I  115 (703)
                      ++.  ++|.||.++|++++|+|  ++++|+||+.||+|+|||+.+++....+..|...|.+++|+|+++++++|+.|+.+
T Consensus        46 ~~~--~tL~GH~~~I~~l~~s~--~~~~l~sgs~Dg~v~iWd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i  121 (340)
T d1tbga_          46 RTR--RTLRGHLAKIYAMHWGT--DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNIC  121 (340)
T ss_dssp             CEE--EEECCCSSCEEEEEECT--TSSEEEEEETTTEEEEEETTTTEEEEEEECSCSCEEEEEECTTSSEEEEEETTCCE
T ss_pred             eee--EEECCCCCCEEEEEECC--CCCEEEEEECCCceeeeecccceeEEEEecccccEEeeEeeccceeeeeeccccee
Confidence            455  78999999999999999  99999999999999999999998878888899999999999999999999999999


Q ss_pred             EEEEcCCCc----EEEEEeccccCCCCC---------------------CCCccchhhcccCCccEEEEEEcCCCCEEEE
Q psy7108         116 IMFDVESAA----QVGSVEARRDLDSGR---------------------LDTDLVTREQSLKAKAVSTVCYSADGSCILA  170 (703)
Q Consensus       116 ~vwd~~~~~----~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s  170 (703)
                      .+|+.....    ....+.++.......                     ............+...+....+.+.+..+++
T Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (340)
T d1tbga_         122 SIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVS  201 (340)
T ss_dssp             EEEESSSSCSCCCEEEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred             ecccccccccccccceecccccccccccccccccccccccccccccccccccccccccccccceeEeeeccccccceeEE
Confidence            999976532    333343332211000                     0001111122334567889999999999999


Q ss_pred             EecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceee--c
Q psy7108         171 AGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARV--L  248 (703)
Q Consensus       171 ~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~--~  248 (703)
                      ++.|+.|++||+++++++.++..+.        ..|++++|+|+++.+++++.++      .+++||++..+.....  .
T Consensus       202 ~~~d~~v~i~d~~~~~~~~~~~~h~--------~~i~~v~~~p~~~~l~s~s~d~------~i~~~~~~~~~~~~~~~~~  267 (340)
T d1tbga_         202 GACDASAKLWDVREGMCRQTFTGHE--------SDINAICFFPNGNAFATGSDDA------TCRLFDLRADQELMTYSHD  267 (340)
T ss_dssp             EETTTEEEEEETTTTEEEEEECCCS--------SCEEEEEECTTSSEEEEEETTS------CEEEEETTTTEEEEEECCT
T ss_pred             eecCceEEEEECCCCcEEEEEeCCC--------CCeEEEEECCCCCEEEEEeCCC------eEEEEeecccccccccccc
Confidence            9999999999999999988876544        4899999999999999887764      7999999988766554  3


Q ss_pred             CCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecce------eeeEEEccchhhhHhhcCCcceEEEEEEe
Q psy7108         249 KPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPF------LLDISITPQSVKEALADKDYAKALMMSLK  317 (703)
Q Consensus       249 ~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~------~~~~~~spd~~~~~l~sg~~~~~l~la~~  317 (703)
                      .+...|.+++|+|++++|++|+.|| |++||+.+++.+..+      +.+++|+|++  .++++++.|+.+++ |+
T Consensus       268 ~~~~~i~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~H~~~V~~l~~s~d~--~~l~s~s~Dg~v~i-Wd  340 (340)
T d1tbga_         268 NIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDG--MAVATGSWDSFLKI-WN  340 (340)
T ss_dssp             TCCSCEEEEEECSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS--SCEEEEETTSCEEE-EC
T ss_pred             cccCceEEEEECCCCCEEEEEECCCEEEEEECCCCcEEEEEcCCCCCEEEEEEeCCC--CEEEEEccCCEEEE-eC
Confidence            4667799999999999999999999 999999998875544      4679999999  88999999999988 74

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.1e-27  Score=248.18  Aligned_cols=239  Identities=12%  Similarity=0.203  Sum_probs=201.4

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCcee-----EEEecCCCcEEEEEEecCCCEEEEEECCCeE
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQ-----HETIQLLSDALCVAYKPDGTEIVVATLDGQL  115 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~-----~~~~~~~~~V~~v~~spdg~~las~s~dg~I  115 (703)
                      +++ +|..+|+|++|+|  +|++|+||+ ||.|+|||+.+....     .....|.+.|.+++|+|||++|++|+.||.|
T Consensus        46 ~~~-~H~~~V~~v~fs~--~g~~latg~-dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~dg~i  121 (337)
T d1gxra_          46 NTL-NHGEVVCAVTISN--PTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTL  121 (337)
T ss_dssp             EEE-CCSSCCCEEEECS--SSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEE
T ss_pred             EEC-CCCCcEEEEEECC--CCCEEEEEE-CCEEEEEEccCCcccceeEEeeecCCCCcEEEEEEcCCCCEEEEeeccccc
Confidence            444 7999999999999  999999998 799999999765421     2234588899999999999999999999999


Q ss_pred             EEEEcCCC--cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEe
Q psy7108         116 IMFDVESA--AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTI  193 (703)
Q Consensus       116 ~vwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~  193 (703)
                      ++||+...  +....+..|..                    .+.+++|+|++..+++++.|+.|++||++++++......
T Consensus       122 ~iwd~~~~~~~~~~~~~~~~~--------------------~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~~~~~~~  181 (337)
T d1gxra_         122 SIWDLAAPTPRIKAELTSSAP--------------------ACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG  181 (337)
T ss_dssp             EEEECCCC--EEEEEEECSSS--------------------CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred             ccccccccccccccccccccc--------------------ccccccccccccccccccccccccccccccccccccccc
Confidence            99998754  34445555543                    799999999999999999999999999999988776654


Q ss_pred             ccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC
Q psy7108         194 TQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG  273 (703)
Q Consensus       194 ~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg  273 (703)
                      +.        ..+.+++|++++..+++++.++      .+++||+++++.+... .|...|.+++|+|+++.+++++.|+
T Consensus       182 ~~--------~~v~~l~~s~~~~~~~~~~~d~------~v~i~d~~~~~~~~~~-~~~~~i~~l~~~~~~~~l~~~~~d~  246 (337)
T d1gxra_         182 HT--------DGASCIDISNDGTKLWTGGLDN------TVRSWDLREGRQLQQH-DFTSQIFSLGYCPTGEWLAVGMESS  246 (337)
T ss_dssp             CS--------SCEEEEEECTTSSEEEEEETTS------EEEEEETTTTEEEEEE-ECSSCEEEEEECTTSSEEEEEETTS
T ss_pred             cc--------cccccccccccccccccccccc------cccccccccceeeccc-ccccceEEEEEcccccccceecccc
Confidence            43        4899999999999999887664      8999999998876544 5788999999999999999999999


Q ss_pred             -EEEEEcCCCceecc-----eeeeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108         274 -VHIYSLDSGYVFDP-----FLLDISITPQSVKEALADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       274 -v~iwd~~~~~~~~~-----~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~  321 (703)
                       +++|++.++.....     ...+++|+|++  ..+++++.|+.+++ |++...
T Consensus       247 ~i~i~d~~~~~~~~~~~~~~~i~~v~~s~~g--~~l~s~s~Dg~i~i-wd~~~~  297 (337)
T d1gxra_         247 NVEVLHVNKPDKYQLHLHESCVLSLKFAYCG--KWFVSTGKDNLLNA-WRTPYG  297 (337)
T ss_dssp             CEEEEETTSSCEEEECCCSSCEEEEEECTTS--SEEEEEETTSEEEE-EETTTC
T ss_pred             ccccccccccccccccccccccceEEECCCC--CEEEEEeCCCeEEE-EECCCC
Confidence             99999998876432     34679999999  78999999999998 987654

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.95  E-value=4e-27  Score=240.84  Aligned_cols=264  Identities=11%  Similarity=0.109  Sum_probs=194.3

Q ss_pred             CCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEe-cCCCcEEEEEEecCCCEEEEEECCC
Q psy7108          35 ARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETI-QLLSDALCVAYKPDGTEIVVATLDG  113 (703)
Q Consensus        35 g~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~-~~~~~V~~v~~spdg~~las~s~dg  113 (703)
                      |++.  +++.||.++|++++|+|  ++++|+||+.||+|++||+++++...... .|...|.+++|+|+|++ ++++.|+
T Consensus         2 g~~~--~~~~GH~~~V~~l~~s~--dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~~g~~-~~~~~d~   76 (299)
T d1nr0a2           2 GSID--QVRYGHNKAITALSSSA--DGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDL-FTVSWDD   76 (299)
T ss_dssp             TEEE--EEECCCSSCEEEEEECT--TSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCE-EEEETTT
T ss_pred             Cccc--eEcCCCCCCcEEEEECC--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCCcEEEEEeecccee-eccccee
Confidence            5566  89999999999999999  99999999999999999999887665553 48889999999999975 5566899


Q ss_pred             eEEEEEcCCCcEE---EEEecccc------C-CCCC-----CCC--cc---chhhcccCCccEEEEEEcCCCCEEEEEec
Q psy7108         114 QLIMFDVESAAQV---GSVEARRD------L-DSGR-----LDT--DL---VTREQSLKAKAVSTVCYSADGSCILAAGQ  173 (703)
Q Consensus       114 ~I~vwd~~~~~~~---~~~~~~~~------~-~~~~-----~~~--~~---~~~~~~~~~~~V~~i~~spdg~~l~s~s~  173 (703)
                      .+++|+.......   .....+..      + ..+.     ...  ..   ...........+.+++|+|+++++++++.
T Consensus        77 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~  156 (299)
T d1nr0a2          77 HLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQ  156 (299)
T ss_dssp             EEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEET
T ss_pred             eEEEeccCCccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9999997543210   00000000      0 0000     000  00   00111123456889999999999999999


Q ss_pred             CCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccc---eeecCC
Q psy7108         174 SKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMA---ARVLKP  250 (703)
Q Consensus       174 dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~---~~~~~h  250 (703)
                      |+.|++||+++++.......       .+...|.+++|+|+++++++++.++      .+++||+.++...   ..+..|
T Consensus       157 dg~i~~~d~~~~~~~~~~~~-------~~~~~i~~~~~~~~~~~l~~~~~d~------~i~~~~~~~~~~~~~~~~~~~h  223 (299)
T d1nr0a2         157 DSKVHVYKLSGASVSEVKTI-------VHPAEITSVAFSNNGAFLVATDQSR------KVIPYSVANNFELAHTNSWTFH  223 (299)
T ss_dssp             TSEEEEEEEETTEEEEEEEE-------ECSSCEEEEEECTTSSEEEEEETTS------CEEEEEGGGTTEESCCCCCCCC
T ss_pred             cccccccccccccccccccc-------ccccccccccccccccccccccccc------cccccccccccccccccccccc
Confidence            99999999988765443221       2335899999999999998877664      7999998877543   344568


Q ss_pred             ccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecce--------eeeEEEccchhhhHhhcCCcceEEEEEEecC
Q psy7108         251 EVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPF--------LLDISITPQSVKEALADKDYAKALMMSLKLN  319 (703)
Q Consensus       251 ~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~--------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~  319 (703)
                      ...|++++|+|++++|++|+.|+ |++||+.++......        .....+++++  ..+++++.|+.+++ |++.
T Consensus       224 ~~~v~~l~~s~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~l~s~s~D~~i~i-Wdl~  298 (299)
T d1nr0a2         224 TAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNE--TTIVSAGQDSNIKF-WNVP  298 (299)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEET--TEEEEEETTSCEEE-EECC
T ss_pred             ccccccccccccccceEEEcCCCEEEEEECCCCCcceEEEecCCCCCcEEEEEECCC--CEEEEEeCCCEEEE-Eecc
Confidence            89999999999999999999999 999999876543222        1223345566  57888899999999 9873

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.95  E-value=4.2e-27  Score=249.51  Aligned_cols=240  Identities=13%  Similarity=0.123  Sum_probs=191.2

Q ss_pred             CCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc--eeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCC
Q psy7108          46 HEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD--TQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESA  123 (703)
Q Consensus        46 H~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~--~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~  123 (703)
                      +.+||+|++|+|  ++++||+|+.||.|+|||..+++  ....+.+|.++|.+++|+|++++|++|+.|++|++||++++
T Consensus         6 ~~~pIt~~~~s~--dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~   83 (371)
T d1k8kc_           6 LVEPISCHAWNK--DRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGR   83 (371)
T ss_dssp             CSSCCCEEEECT--TSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETT
T ss_pred             CCCCeEEEEECC--CCCEEEEEeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeeccc
Confidence            358899999999  99999999999999999997764  34455679999999999999999999999999999999887


Q ss_pred             cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCcccccc
Q psy7108         124 AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGIN  203 (703)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~  203 (703)
                      +....+....                  |...|++++|+|+++.|++++.|++|++|++............    ..++.
T Consensus        84 ~~~~~~~~~~------------------~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~----~~~~~  141 (371)
T d1k8kc_          84 TWKPTLVILR------------------INRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHI----KKPIR  141 (371)
T ss_dssp             EEEEEEECCC------------------CSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEE----CTTCC
T ss_pred             cccccccccc------------------ccccccccccccccccceeecccCcceeeeeeccccccccccc----ccccc
Confidence            6554443211                  2348999999999999999999999999998876554333321    23455


Q ss_pred             ccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCc------------------cceeecCCccceEEEEEcCCCCE
Q psy7108         204 DFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGD------------------MAARVLKPEVRVFCVKFSPTGQA  265 (703)
Q Consensus       204 ~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~------------------~~~~~~~h~~~V~~l~~spdg~~  265 (703)
                      ..|.+++|+|+++++++++.++      .+++||.....                  .......|...|.+++|+|+|+.
T Consensus       142 ~~v~~v~~~p~~~~l~s~s~D~------~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~  215 (371)
T d1k8kc_         142 STVLSLDWHPNSVLLAAGSCDF------KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSR  215 (371)
T ss_dssp             SCEEEEEECTTSSEEEEEETTS------CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSE
T ss_pred             cccccccccccccceeccccCc------EEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeeccccc
Confidence            6899999999999998887664      79999875432                  23344568888999999999999


Q ss_pred             EEEEeCCC-EEEEEcCCCceecce------eeeEEEccchhhhHhhcCCcceEEEEEEe
Q psy7108         266 WVAATTEG-VHIYSLDSGYVFDPF------LLDISITPQSVKEALADKDYAKALMMSLK  317 (703)
Q Consensus       266 l~s~s~Dg-v~iwd~~~~~~~~~~------~~~~~~spd~~~~~l~sg~~~~~l~la~~  317 (703)
                      |++++.|+ |++||+.++..+..+      ..+++|+|++  .++++|..+......++
T Consensus       216 l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~s~~fs~d~--~~la~g~d~~~~~~~~~  272 (371)
T d1k8kc_         216 VAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITES--SLVAAGHDCFPVLFTYD  272 (371)
T ss_dssp             EEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETT--EEEEEETTSSCEEEEEE
T ss_pred             ccccccCCcceEEeeecccceeeeecccccceeeeecCCC--CEEEEEcCCceEEEEee
Confidence            99999999 999999988775443      3678999999  77887764443333343

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.95  E-value=2e-26  Score=244.33  Aligned_cols=243  Identities=16%  Similarity=0.247  Sum_probs=198.9

Q ss_pred             cCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCC
Q psy7108          44 SGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESA  123 (703)
Q Consensus        44 ~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~  123 (703)
                      .+|...|++++|+|  ++++|++|+.||+|++||...++.......|...|.+++|++++..+++++.++.+++||.++.
T Consensus       118 ~~~~~~V~~l~~s~--~~~~l~s~~~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~  195 (388)
T d1erja_         118 PSSDLYIRSVCFSP--DGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTG  195 (388)
T ss_dssp             -CCCCBEEEEEECT--TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred             cCCCCCEEEEEECC--CCCcceecccccccccccccccccccccccccccccccccccccccccccccceeeeeeecccc
Confidence            35777899999999  9999999999999999999998877888889999999999999999999999999999999998


Q ss_pred             cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEc-CCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccc
Q psy7108         124 AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYS-ADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGI  202 (703)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~s-pdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~  202 (703)
                      ........+.                     ...++.++ +++++|++++.|+.|++||.+++.....+.... ....+|
T Consensus       196 ~~~~~~~~~~---------------------~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~-~~~~~h  253 (388)
T d1erja_         196 QCSLTLSIED---------------------GVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSEN-ESGTGH  253 (388)
T ss_dssp             EEEEEEECSS---------------------CEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC-------CCC
T ss_pred             cccccccccc---------------------ccccccccCCCCCeEEEEcCCCeEEEeecccCccceeecccc-ccccCC
Confidence            8777666554                     34455554 588999999999999999999998887765332 234567


Q ss_pred             cccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcc------------ceeecCCccceEEEEEcCCCCEEEEEe
Q psy7108         203 NDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDM------------AARVLKPEVRVFCVKFSPTGQAWVAAT  270 (703)
Q Consensus       203 ~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~------------~~~~~~h~~~V~~l~~spdg~~l~s~s  270 (703)
                      ...|.+++|+|+++.+++++.++      .+++||+++++.            ......|...|.+++|+|++++|++|+
T Consensus       254 ~~~v~~l~~s~~~~~l~s~~~d~------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~  327 (388)
T d1erja_         254 KDSVYSVVFTRDGQSVVSGSLDR------SVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGS  327 (388)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTS------EEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEE
T ss_pred             CCCEEEEEECCCCCEEEEEECCC------cEEEEeccCCccccccccccccceeeecccccceEEEEEECCCCCEEEEEe
Confidence            77999999999999999888764      899999876543            233456788999999999999999999


Q ss_pred             CCC-EEEEEcCCCceeccee------eeE------EEccchhhhHhhcCCcceEEEEEEecC
Q psy7108         271 TEG-VHIYSLDSGYVFDPFL------LDI------SITPQSVKEALADKDYAKALMMSLKLN  319 (703)
Q Consensus       271 ~Dg-v~iwd~~~~~~~~~~~------~~~------~~spd~~~~~l~sg~~~~~l~la~~l~  319 (703)
                      .|| |++||+.+++++..+.      .++      .|+|++  .++++++.|+.|++ |++.
T Consensus       328 ~dg~i~vwd~~~~~~~~~l~~H~~~V~~~~~~~~~~~spd~--~~l~s~s~Dg~I~i-W~~~  386 (388)
T d1erja_         328 KDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEY--NVFATGSGDCKARI-WKYK  386 (388)
T ss_dssp             TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTC--EEEEEEETTSEEEE-EEEE
T ss_pred             CCCEEEEEECCCCcEEEEEeCCCCCEEEEEEecCcccCCCC--CEEEEEeCCCEEEE-Eeee
Confidence            999 9999999998865543      333      457788  78999999999998 9874

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.95  E-value=4.4e-27  Score=243.30  Aligned_cols=239  Identities=11%  Similarity=0.198  Sum_probs=200.2

Q ss_pred             CCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCc
Q psy7108          45 GHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAA  124 (703)
Q Consensus        45 gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~  124 (703)
                      .+++.+.+++++|  +|+.|+.++ ++.+.+|++.+......+..|.+.|++++|+|+|++||+|+.||+|++||+.+++
T Consensus        15 ~~r~~~~~~a~~~--~g~~l~~~~-~~~v~i~~~~~~~~~~~~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~   91 (311)
T d1nr0a1          15 TARGTAVVLGNTP--AGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTT   91 (311)
T ss_dssp             CCTTCCCCCEECT--TSSEEEEEE-TTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTT
T ss_pred             CCCCCeEEEEEcC--CCCEEEEEe-CCEEEEEECCCCceeEEEcCCCCCEEEEEEeCCCCeEeccccCceEeeeeeeccc
Confidence            3455677889999  999999986 5679999999887777777899999999999999999999999999999998876


Q ss_pred             EE--EEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec--CCcEEEEECCCCceEEEEEeccCCccc
Q psy7108         125 QV--GSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ--SKYICIYSSREGILLKKFTITQNKSLD  200 (703)
Q Consensus       125 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~--dg~I~lwD~~~~~~~~~~~~~~~~~~~  200 (703)
                      ..  ..+..|..                    .|.+++|+|++++|++++.  +..+++||+++++...++.        
T Consensus        92 ~~~~~~~~~~~~--------------------~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~--------  143 (311)
T d1nr0a1          92 HILKTTIPVFSG--------------------PVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLT--------  143 (311)
T ss_dssp             CCEEEEEECSSS--------------------CEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCC--------
T ss_pred             cccccccccccC--------------------cccccccccccccccccccccccccccccccccccccccc--------
Confidence            43  44555543                    8999999999999999875  4569999999887765543        


Q ss_pred             cccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEc
Q psy7108         201 GINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSL  279 (703)
Q Consensus       201 ~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~  279 (703)
                      +|...|.+++|+|++++++++++.+     ..|++||+++++.......|...|.+++|+|+++++++++.|+ +++|+.
T Consensus       144 ~h~~~v~~v~~~~~~~~~l~sgs~d-----~~i~i~d~~~~~~~~~~~~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~  218 (311)
T d1nr0a1         144 GQARAMNSVDFKPSRPFRIISGSDD-----NTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNG  218 (311)
T ss_dssp             CCSSCEEEEEECSSSSCEEEEEETT-----SCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred             ccccccccccccccceeeecccccc-----cccccccccccccccccccccccccccccCcccccccccccccccccccc
Confidence            4555899999999999755544322     3799999999999999999999999999999999999999999 999999


Q ss_pred             CCCceecce-------------eeeEEEccchhhhHhhcCCcceEEEEEEecCchh
Q psy7108         280 DSGYVFDPF-------------LLDISITPQSVKEALADKDYAKALMMSLKLNEQG  322 (703)
Q Consensus       280 ~~~~~~~~~-------------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~~  322 (703)
                      .++.....+             ..+++|+|++  .++++++.|+.+++ |++++.+
T Consensus       219 ~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~--~~l~tgs~Dg~v~i-wd~~t~~  271 (311)
T d1nr0a1         219 VDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDG--TKIASASADKTIKI-WNVATLK  271 (311)
T ss_dssp             TTCCEEEECBCTTSSSCSSSSCEEEEEECTTS--SEEEEEETTSEEEE-EETTTTE
T ss_pred             ccccccccccccccccccccccccccccCCCC--CEEEEEeCCCeEEE-EECCCCc
Confidence            887654322             3578999999  88999999999998 9987654

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.95  E-value=1.2e-26  Score=245.98  Aligned_cols=241  Identities=12%  Similarity=0.137  Sum_probs=181.1

Q ss_pred             eecccCCceEEecCC--ceeeccC-CC--ccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCcee--E
Q psy7108          13 RETHEGGNVVLKLPG--VKKGDMA-AR--VLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQ--H   85 (703)
Q Consensus        13 ~~~~~~~~~~i~~~~--v~~~d~t-g~--~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~--~   85 (703)
                      .+..++...++...+  +++|+.. ++  ++  ..+.+|.++|++++|+|  ++++|+||+.|++|++||+.++...  .
T Consensus        14 ~~s~dg~~la~~~~~~~i~iw~~~~~~~~~~--~~l~gH~~~V~~l~fsp--~~~~l~s~s~D~~i~vWd~~~~~~~~~~   89 (371)
T d1k8kc_          14 AWNKDRTQIAICPNNHEVHIYEKSGNKWVQV--HELKEHNGQVTGVDWAP--DSNRIVTCGTDRNAYVWTLKGRTWKPTL   89 (371)
T ss_dssp             EECTTSSEEEEECSSSEEEEEEEETTEEEEE--EEEECCSSCEEEEEEET--TTTEEEEEETTSCEEEEEEETTEEEEEE
T ss_pred             EECCCCCEEEEEeCCCEEEEEECCCCCEEEE--EEecCCCCCEEEEEECC--CCCEEEEEECCCeEEEEeeccccccccc
Confidence            343444444333332  5566643 43  44  77899999999999999  9999999999999999999876533  3


Q ss_pred             EEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCC
Q psy7108          86 ETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADG  165 (703)
Q Consensus        86 ~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg  165 (703)
                      ....|...|.+++|+|+++.|++++.|++|++|+++............                ..|...|.+++|+|++
T Consensus        90 ~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~----------------~~~~~~v~~v~~~p~~  153 (371)
T d1k8kc_          90 VILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIK----------------KPIRSTVLSLDWHPNS  153 (371)
T ss_dssp             ECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEEC----------------TTCCSCEEEEEECTTS
T ss_pred             ccccccccccccccccccccceeecccCcceeeeeecccccccccccc----------------cccccccccccccccc
Confidence            334578899999999999999999999999999987665433322211                1234589999999999


Q ss_pred             CEEEEEecCCcEEEEECCCCceEEEEEec----------cCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEEC
Q psy7108         166 SCILAAGQSKYICIYSSREGILLKKFTIT----------QNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKL  235 (703)
Q Consensus       166 ~~l~s~s~dg~I~lwD~~~~~~~~~~~~~----------~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~i  235 (703)
                      ++|++|+.|++|++||.............          ......++...+.+++|+|+|+.+++++.++      .|++
T Consensus       154 ~~l~s~s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~------~i~i  227 (371)
T d1k8kc_         154 VLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDS------TVCL  227 (371)
T ss_dssp             SEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTT------EEEE
T ss_pred             cceeccccCcEEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeecccccccccccCC------cceE
Confidence            99999999999999998754321110000          0011234556899999999999998887654      8999


Q ss_pred             CCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCCEEEEEc
Q psy7108         236 PGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYSL  279 (703)
Q Consensus       236 wd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dgv~iwd~  279 (703)
                      ||+.+++.+..+..|..+|.+++|+||++++++|+++.+++|..
T Consensus       228 wd~~~~~~~~~~~~~~~~v~s~~fs~d~~~la~g~d~~~~~~~~  271 (371)
T d1k8kc_         228 ADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTY  271 (371)
T ss_dssp             EEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEETTSSCEEEEE
T ss_pred             EeeecccceeeeecccccceeeeecCCCCEEEEEcCCceEEEEe
Confidence            99999999999999999999999999998888766444665543

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.95  E-value=1.1e-25  Score=229.37  Aligned_cols=215  Identities=20%  Similarity=0.248  Sum_probs=184.1

Q ss_pred             ceeec-cCCCccccccccCCCcCeEEEEEcCCC----------------------------------------CCCEEEE
Q psy7108          28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVL----------------------------------------SSTGMVS   66 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~----------------------------------------dg~~L~s   66 (703)
                      +++|| .+++++  .++.+|.+.|.+++|+|..                                        +++.+++
T Consensus        41 i~iWd~~~~~~~--~~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (317)
T d1vyhc1          41 IKVWDYETGDFE--RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVS  118 (317)
T ss_dssp             EEEEETTTCCCC--EEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEE
T ss_pred             EEEEECCCCCEE--EEEeCCCCcEEEEeeecccccccccccccccccccccccccccccccccccceeeeccCCCceEEe
Confidence            66666 467777  7777787777777777610                                        3456778


Q ss_pred             EeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccch
Q psy7108          67 ASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVT  146 (703)
Q Consensus        67 gs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (703)
                      ++.|+.+++||+.++.....+..|...+.+++|+|+++.|++++.|+.|++|++.+++....+..+..            
T Consensus       119 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~------------  186 (317)
T d1vyhc1         119 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRH------------  186 (317)
T ss_dssp             EETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSS------------
T ss_pred             eccCcceeEeecccceeeeEEccCCCcceeeecccCCCEEEEEeCCCeEEEEeeccceeeEEEecCCC------------
Confidence            88899999999998887778888999999999999999999999999999999999999888887654            


Q ss_pred             hhcccCCccEEEEEEcCC--------------------CCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccc
Q psy7108         147 REQSLKAKAVSTVCYSAD--------------------GSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFI  206 (703)
Q Consensus       147 ~~~~~~~~~V~~i~~spd--------------------g~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v  206 (703)
                              .+.+++|+|+                    +..+++++.|+.|++||+++++++.++..+..        .|
T Consensus       187 --------~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~--------~v  250 (317)
T d1vyhc1         187 --------VVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN--------WV  250 (317)
T ss_dssp             --------CEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSS--------CE
T ss_pred             --------CceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCCCcEEEEEeCCCC--------CE
Confidence                    4555555543                    46789999999999999999999988876554        89


Q ss_pred             eeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEE
Q psy7108         207 NRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYS  278 (703)
Q Consensus       207 ~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd  278 (703)
                      .+++++|+++++++++.++      .|++||+.+++++..+.+|...|++++|+|++++|++|+.|| |+|||
T Consensus       251 ~~~~~~~~~~~l~s~~~dg------~i~iwd~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~s~s~Dg~i~iWd  317 (317)
T d1vyhc1         251 RGVLFHSGGKFILSCADDK------TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE  317 (317)
T ss_dssp             EEEEECSSSSCEEEEETTT------EEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred             EEEEECCCCCEEEEEECCC------eEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEeC
Confidence            9999999999999887764      899999999999999999999999999999999999999999 99996

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.95  E-value=9.8e-26  Score=233.20  Aligned_cols=215  Identities=14%  Similarity=0.221  Sum_probs=185.7

Q ss_pred             ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCce----eEE----------------
Q psy7108          28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDT----QHE----------------   86 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~----~~~----------------   86 (703)
                      +++|| .+++.+  ..+.+|..+|.+++|+|  ++.++++|+.|+.+++|+......    ...                
T Consensus        79 v~iWd~~~~~~~--~~~~~~~~~v~~v~~~~--~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (340)
T d1tbga_          79 LIIWDSYTTNKV--HAIPLRSSWVMTCAYAP--SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDD  154 (340)
T ss_dssp             EEEEETTTTEEE--EEEECSCSCEEEEEECT--TSSEEEEEETTCCEEEEESSSSCSCCCEEEEECCCSSCEEEEEEEET
T ss_pred             eeeeecccceeE--EEEecccccEEeeEeec--cceeeeeecccceeecccccccccccccceecccccccccccccccc
Confidence            77787 578888  89999999999999999  999999999999999999754321    000                


Q ss_pred             -------------------------EecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCC
Q psy7108          87 -------------------------TIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLD  141 (703)
Q Consensus        87 -------------------------~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~  141 (703)
                                               ...+...+....+.+.+..+++++.|+.|++||+++++.+..+.+|..       
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~~h~~-------  227 (340)
T d1tbga_         155 NQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHES-------  227 (340)
T ss_dssp             TEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECCCSS-------
T ss_pred             cccccccccccccccccccccccccccccceeEeeeccccccceeEEeecCceEEEEECCCCcEEEEEeCCCC-------
Confidence                                     111234577888888999999999999999999999999999888765       


Q ss_pred             CccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEE
Q psy7108         142 TDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIE  221 (703)
Q Consensus       142 ~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~  221 (703)
                                   .|++++|+|++++|++|+.|+.|++||++.......+...      .+...+.+++|+|++++++++
T Consensus       228 -------------~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~------~~~~~i~~~~~s~~~~~l~~g  288 (340)
T d1tbga_         228 -------------DINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHD------NIICGITSVSFSKSGRLLLAG  288 (340)
T ss_dssp             -------------CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCT------TCCSCEEEEEECSSSCEEEEE
T ss_pred             -------------CeEEEEECCCCCEEEEEeCCCeEEEEeecccccccccccc------cccCceEEEEECCCCCEEEEE
Confidence                         8999999999999999999999999999998877766432      233478999999999999988


Q ss_pred             cccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEE
Q psy7108         222 TRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYS  278 (703)
Q Consensus       222 ~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd  278 (703)
                      +.++      .|++||+.+++++..+.+|...|++++|+|++++|++|+.|| |+|||
T Consensus       289 ~~dg------~i~iwd~~~~~~~~~~~~H~~~V~~l~~s~d~~~l~s~s~Dg~v~iWd  340 (340)
T d1tbga_         289 YDDF------NCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN  340 (340)
T ss_dssp             ETTS------CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             ECCC------EEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEccCCEEEEeC
Confidence            8764      799999999999999999999999999999999999999999 99997

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.95  E-value=4.7e-26  Score=241.41  Aligned_cols=238  Identities=15%  Similarity=0.266  Sum_probs=193.8

Q ss_pred             CCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEe------------------cCCCcEEEEEEecCCCEE
Q psy7108          45 GHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETI------------------QLLSDALCVAYKPDGTEI  106 (703)
Q Consensus        45 gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~------------------~~~~~V~~v~~spdg~~l  106 (703)
                      +|++.|+|++|+|  +|++||+|+ |++|+|||+.+++......                  .|...|.+++|+|+|++|
T Consensus        60 ~H~~~V~~l~fs~--dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l  136 (388)
T d1erja_          60 DHTSVVCCVKFSN--DGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFL  136 (388)
T ss_dssp             ECSSCCCEEEECT--TSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEE
T ss_pred             CCCCcEEEEEECC--CCCEEEEEe-CCeEEEEEecccceEeeecccccccccccccccccccCCCCCEEEEEECCCCCcc
Confidence            6999999999999  999999987 8999999998876544332                  356679999999999999


Q ss_pred             EEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCc
Q psy7108         107 VVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGI  186 (703)
Q Consensus       107 as~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~  186 (703)
                      ++|+.||.|++||..+++.+....+|..                    .|.++++++++..+++++.++.+++||.++..
T Consensus       137 ~s~~~dg~v~i~~~~~~~~~~~~~~h~~--------------------~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~  196 (388)
T d1erja_         137 ATGAEDRLIRIWDIENRKIVMILQGHEQ--------------------DIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQ  196 (388)
T ss_dssp             EEEETTSCEEEEETTTTEEEEEECCCSS--------------------CEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred             eecccccccccccccccccccccccccc--------------------cccccccccccccccccccceeeeeeeccccc
Confidence            9999999999999999999888887765                    89999999999999999999999999999987


Q ss_pred             eEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceee-------cCCccceEEEEE
Q psy7108         187 LLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARV-------LKPEVRVFCVKF  259 (703)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~-------~~h~~~V~~l~~  259 (703)
                      .......+..        .+....+.+++..+++++.++      .+++||..++.....+       .+|...|.+++|
T Consensus       197 ~~~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~------~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~  262 (388)
T d1erja_         197 CSLTLSIEDG--------VTTVAVSPGDGKYIAAGSLDR------AVRVWDSETGFLVERLDSENESGTGHKDSVYSVVF  262 (388)
T ss_dssp             EEEEEECSSC--------EEEEEECSTTCCEEEEEETTS------CEEEEETTTCCEEEEEC------CCCSSCEEEEEE
T ss_pred             cccccccccc--------cccccccCCCCCeEEEEcCCC------eEEEeecccCccceeeccccccccCCCCCEEEEEE
Confidence            7766553322        333344455778888777653      7999999988765443       357889999999


Q ss_pred             cCCCCEEEEEeCCC-EEEEEcCCCcee------------------cceeeeEEEccchhhhHhhcCCcceEEEEEEecCc
Q psy7108         260 SPTGQAWVAATTEG-VHIYSLDSGYVF------------------DPFLLDISITPQSVKEALADKDYAKALMMSLKLNE  320 (703)
Q Consensus       260 spdg~~l~s~s~Dg-v~iwd~~~~~~~------------------~~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~  320 (703)
                      +|++++|++++.|+ +++||+.++...                  .....+++|+|++  .++++++.++.+++ |++..
T Consensus       263 s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~--~~l~sg~~dg~i~v-wd~~~  339 (388)
T d1erja_         263 TRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQND--EYILSGSKDRGVLF-WDKKS  339 (388)
T ss_dssp             CTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGG--CEEEEEETTSEEEE-EETTT
T ss_pred             CCCCCEEEEEECCCcEEEEeccCCccccccccccccceeeecccccceEEEEEECCCC--CEEEEEeCCCEEEE-EECCC
Confidence            99999999999999 999998765432                  1223678999999  88999999999998 98875


Q ss_pred             hh
Q psy7108         321 QG  322 (703)
Q Consensus       321 ~~  322 (703)
                      .+
T Consensus       340 ~~  341 (388)
T d1erja_         340 GN  341 (388)
T ss_dssp             CC
T ss_pred             Cc
Confidence            43

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.94  E-value=9.4e-26  Score=234.55  Aligned_cols=245  Identities=11%  Similarity=0.181  Sum_probs=194.2

Q ss_pred             ccccCC-CcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCcee--------EEEecCCCcEEEEEEecCCCEEEEEEC
Q psy7108          41 EVLSGH-EGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQ--------HETIQLLSDALCVAYKPDGTEIVVATL  111 (703)
Q Consensus        41 ~~l~gH-~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~--------~~~~~~~~~V~~v~~spdg~~las~s~  111 (703)
                      ..+.+| ...|++++|+|..++.+|+||+.||+|+|||+..+...        .....|.++|.+++|+++++.+++++.
T Consensus        56 ~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~  135 (325)
T d1pgua1          56 VQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGE  135 (325)
T ss_dssp             EEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEEC
T ss_pred             EEEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecCCcceeeeecccccccccccCcEEEEEECCCCCccceeec
Confidence            677887 46899999998446789999999999999998654321        123357889999999999999988765


Q ss_pred             --CCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCE-EEEEecCCcEEEEECCCCceE
Q psy7108         112 --DGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSC-ILAAGQSKYICIYSSREGILL  188 (703)
Q Consensus       112 --dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~-l~s~s~dg~I~lwD~~~~~~~  188 (703)
                        ++.+.+|+.++++.+..+.+|..                    .|.+++|+|++.. +++++.|+.+++||.+..+..
T Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~h~~--------------------~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~  195 (325)
T d1pgua1         136 GRDNFGVFISWDSGNSLGEVSGHSQ--------------------RINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFS  195 (325)
T ss_dssp             CSSCSEEEEETTTCCEEEECCSCSS--------------------CEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEE
T ss_pred             cccceEEEEeecccccceeeeeccc--------------------ccccccccccccceEEEeecccccccccccccccc
Confidence              67899999999999988887765                    8999999998875 677899999999999988776


Q ss_pred             EEEEeccCCccccccccceeeeeccCC-CEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEc---CCCC
Q psy7108         189 KKFTITQNKSLDGINDFINRRKMTEFG-NVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFS---PTGQ  264 (703)
Q Consensus       189 ~~~~~~~~~~~~~~~~~v~~~~~spdg-~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~s---pdg~  264 (703)
                      .....+     .++...|.+++|+|++ .++++++.+      +.|++||.++++.+..+.+|...+.++.|+   |+|+
T Consensus       196 ~~~~~~-----~~~~~~v~~v~~~pd~~~~l~s~~~d------~~i~iwd~~~~~~~~~l~~~~~~v~~~~~s~~~~dg~  264 (325)
T d1pgua1         196 ASDRTH-----HKQGSFVRDVEFSPDSGEFVITVGSD------RKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQ  264 (325)
T ss_dssp             EEECSS-----SCTTCCEEEEEECSTTCCEEEEEETT------CCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSS
T ss_pred             eecccc-----cCCCCccEEeeeccccceeccccccc------cceeeeeeccccccccccccccccccceeeeeccCCC
Confidence            665432     3456689999999975 566666655      379999999999998888888887666665   7899


Q ss_pred             EEEEEeCCC-EEEEEcCCCceeccee--------eeEEEccchhhhHhhcCCcceEEEEEEec
Q psy7108         265 AWVAATTEG-VHIYSLDSGYVFDPFL--------LDISITPQSVKEALADKDYAKALMMSLKL  318 (703)
Q Consensus       265 ~l~s~s~Dg-v~iwd~~~~~~~~~~~--------~~~~~spd~~~~~l~sg~~~~~l~la~~l  318 (703)
                      +|++++.|+ |+|||+.+++.+..+.        ..+++.+.+. ..+.+++.|+.+++ |++
T Consensus       265 ~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~s~s~dg~i~v-wdl  325 (325)
T d1pgua1         265 KFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGN-GRIISLSLDGTLNF-YEL  325 (325)
T ss_dssp             EEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEET-TEEEEEETTSCEEE-EET
T ss_pred             EEEEEeCCCeEEEEECCCCCEEEEEEecCCcccCeEEEEEECCC-CEEEEEECCCEEEE-EEC
Confidence            999999999 9999999998866553        1234443321 25678888999988 864

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.2e-23  Score=216.74  Aligned_cols=251  Identities=17%  Similarity=0.287  Sum_probs=184.5

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEc
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDV  120 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~  120 (703)
                      ++|+||++.|.+ ++++  +|++|||||.||+|+|||+.+++....+..|.+.|.+++|+|+  .|++|+.|+.+++|+.
T Consensus        10 ~~l~GH~~~V~s-~~~~--~g~~l~sgs~Dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~~~~--~l~s~s~D~~~~~~~~   84 (342)
T d2ovrb2          10 KVLKGHDDHVIT-CLQF--CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNA   84 (342)
T ss_dssp             EEEECSTTSCEE-EEEE--ETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEETT--EEEEEETTSCEEEEET
T ss_pred             EEECCcCCceEE-EEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCCEEEEEeCCC--ccccceeccccccccc
Confidence            889999999865 4677  8899999999999999999999888888889999999999974  8999999999999998


Q ss_pred             CCCcEEEEEeccccC-------------------------CCCC--------------------------CCC-------
Q psy7108         121 ESAAQVGSVEARRDL-------------------------DSGR--------------------------LDT-------  142 (703)
Q Consensus       121 ~~~~~~~~~~~~~~~-------------------------~~~~--------------------------~~~-------  142 (703)
                      ...............                         ..+.                          ...       
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~d~  164 (342)
T d2ovrb2          85 ETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDP  164 (342)
T ss_dssp             TTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEEEEG
T ss_pred             ccccceecccccceeEeeeecccccccccccceeEEEeecccccceeeeecccccceeeccccceeeeecCCCeEEEeec
Confidence            765543322211100                         0000                          000       


Q ss_pred             --ccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEE
Q psy7108         143 --DLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLI  220 (703)
Q Consensus       143 --~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~  220 (703)
                        .........|...+  ..+++++..+++++.|+.|++||++.++++..+..+..        .+.++++  +++++++
T Consensus       165 ~~~~~~~~~~~~~~~~--~~~~~~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~--------~v~~~~~--~~~~l~s  232 (342)
T d2ovrb2         165 ETETCLHTLQGHTNRV--YSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS--------LTSGMEL--KDNILVS  232 (342)
T ss_dssp             GGTEEEEEECCCSSCE--EEEEECSSEEEEEETTSCEEEEETTTCCEEEEECCCCS--------CEEEEEE--ETTEEEE
T ss_pred             ccceeeEEEcCccccc--ccccCCCCEEEEEeCCCeEEEeecccceeeeEeccccc--------ceeEEec--CCCEEEE
Confidence              00000112233333  44556789999999999999999999998887765443        5665555  4567877


Q ss_pred             EcccCCCCCeeEEECCCCCCCccceeecC---CccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecce--------
Q psy7108         221 ETRETHEGGNVVLKLPGVKKGDMAARVLK---PEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPF--------  288 (703)
Q Consensus       221 ~~~~~~~~~~~~i~iwd~~~~~~~~~~~~---h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~--------  288 (703)
                      ++.++      .|++||....+....+..   |...+.++.++  ++++++|+.|| |++||+++++.+..+        
T Consensus       233 ~s~d~------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~s~s~Dg~i~iwd~~tg~~i~~~~~~~~~~~  304 (342)
T d2ovrb2         233 GNADS------TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGS  304 (342)
T ss_dssp             EETTS------CEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGG
T ss_pred             EcCCC------EEEEEecccccccccccccceeeeceeecccC--CCeeEEEcCCCEEEEEECCCCCEEEEEecccCCCC
Confidence            77653      799999998877666654   55667666665  56999999999 999999999876544        


Q ss_pred             ---eeeEEEccchhhhHhhcCCcceE----EEEEEecC
Q psy7108         289 ---LLDISITPQSVKEALADKDYAKA----LMMSLKLN  319 (703)
Q Consensus       289 ---~~~~~~spd~~~~~l~sg~~~~~----l~la~~l~  319 (703)
                         ..+++|+|++  .++++|+.+++    +.+ |+++
T Consensus       305 ~~~v~~v~~s~~~--~~la~g~~dGt~~~~l~~-~Df~  339 (342)
T d2ovrb2         305 GGVVWRIRASNTK--LVCAVGSRNGTEETKLLV-LDFD  339 (342)
T ss_dssp             TCEEEEEEECSSE--EEEEEECSSSSSCCEEEE-EECC
T ss_pred             CCCEEEEEECCCC--CEEEEEeCCCCCeeEEEE-EeCC
Confidence               4578999999  78888887774    555 7665

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.90  E-value=1.9e-22  Score=205.66  Aligned_cols=216  Identities=14%  Similarity=0.176  Sum_probs=162.1

Q ss_pred             ceeec-cCCCccccccc-cCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCce-------------eE-------
Q psy7108          28 VKKGD-MAARVLKPEVL-SGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDT-------------QH-------   85 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l-~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~-------------~~-------   85 (703)
                      +++|| .+++++  +.+ .+|.+.|++++|+|  ++. +++++.|+.+++|+......             ..       
T Consensus        36 v~vWd~~~~~~~--~~~~~~h~~~v~~v~~~~--~g~-~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  110 (299)
T d1nr0a2          36 INSWDISTGISN--RVFPDVHATMITGIKTTS--KGD-LFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSAD  110 (299)
T ss_dssp             EEEEETTTCCEE--ECSSCSCSSCEEEEEECT--TSC-EEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTT
T ss_pred             EEEEECCCCcEE--EEEcCCCCCcEEEEEeec--cce-eecccceeeEEEeccCCccccccccccccccccccccccccc
Confidence            67787 467777  666 57999999999999  886 45667789999999743210             00       


Q ss_pred             --------------------EEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEE-EeccccCCCCCCCCcc
Q psy7108          86 --------------------ETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGS-VEARRDLDSGRLDTDL  144 (703)
Q Consensus        86 --------------------~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~  144 (703)
                                          ........+.+++|+|+++.+++++.|+.|++||+++++.... ...|            
T Consensus       111 g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~~~d~~~~~~~~~~~~~~------------  178 (299)
T d1nr0a2         111 GDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVH------------  178 (299)
T ss_dssp             SSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEEC------------
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc------------
Confidence                                0001233577888999999999999999999999987765432 2223            


Q ss_pred             chhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEccc
Q psy7108         145 VTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRE  224 (703)
Q Consensus       145 ~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~  224 (703)
                              ...|++++|+|++++|++++.|+.|++||+.++......     ....+|...|++++|+|+++++++++.+
T Consensus       179 --------~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~-----~~~~~h~~~v~~l~~s~~~~~l~sgs~d  245 (299)
T d1nr0a2         179 --------PAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHT-----NSWTFHTAKVACVSWSPDNVRLATGSLD  245 (299)
T ss_dssp             --------SSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCC-----CCCCCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             --------ccccccccccccccccccccccccccccccccccccccc-----ccccccccccccccccccccceEEEcCC
Confidence                    348999999999999999999999999999887654332     2244566799999999999999988776


Q ss_pred             CCCCCeeEEECCCCCCCccceee--cCC-ccceEEEEEcCCCCEEEEEeCCC-EEEEEcC
Q psy7108         225 THEGGNVVLKLPGVKKGDMAARV--LKP-EVRVFCVKFSPTGQAWVAATTEG-VHIYSLD  280 (703)
Q Consensus       225 ~~~~~~~~i~iwd~~~~~~~~~~--~~h-~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~  280 (703)
                      +      .|++||++++......  ..| ...+.++.| +++++|++++.|+ |++||+.
T Consensus       246 g------~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~s~D~~i~iWdl~  298 (299)
T d1nr0a2         246 N------SVIVWNMNKPSDHPIIIKGAHAMSSVNSVIW-LNETTIVSAGQDSNIKFWNVP  298 (299)
T ss_dssp             S------CEEEEETTCTTSCCEEETTSSTTSCEEEEEE-EETTEEEEEETTSCEEEEECC
T ss_pred             C------EEEEEECCCCCcceEEEecCCCCCcEEEEEE-CCCCEEEEEeCCCEEEEEecc
Confidence            4      7999999877543322  233 445666654 6678999999999 9999984

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.90  E-value=3.3e-23  Score=220.94  Aligned_cols=255  Identities=13%  Similarity=0.153  Sum_probs=177.1

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc------eeEEEecCCCcEEEEEEe---c----CCCEEE
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD------TQHETIQLLSDALCVAYK---P----DGTEIV  107 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~------~~~~~~~~~~~V~~v~~s---p----dg~~la  107 (703)
                      ...++|.+.|.++++++    ++++|||.|++|+|||..+.+      .......|...+..+...   +    ++..++
T Consensus         8 ~~~~~H~~~I~~v~~~~----~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (393)
T d1sq9a_           8 NAGKAHDADIFSVSACN----SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVA   83 (393)
T ss_dssp             EESSCSSSCEEEEEECS----SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEE
T ss_pred             ecCCcccCccEEEEEeC----CEEEEEECCCeEEEEECCCCCCCcccceeEeeeeccCCceEeeeEeeeccCCCCCcEEE
Confidence            45689999999999865    689999999999999976543      123333455544333221   1    234678


Q ss_pred             EEECCCeEEEEEcCCCcEEE-----EEec-----------------cccCCCC------CCCCc----------------
Q psy7108         108 VATLDGQLIMFDVESAAQVG-----SVEA-----------------RRDLDSG------RLDTD----------------  143 (703)
Q Consensus       108 s~s~dg~I~vwd~~~~~~~~-----~~~~-----------------~~~~~~~------~~~~~----------------  143 (703)
                      +++.||.|++|++.......     ....                 .......      .....                
T Consensus        84 s~~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~  163 (393)
T d1sq9a_          84 TTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSL  163 (393)
T ss_dssp             EEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHT
T ss_pred             EEeCCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCccccee
Confidence            88999999999875322100     0000                 0000000      00000                


Q ss_pred             -----------cchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeec
Q psy7108         144 -----------LVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMT  212 (703)
Q Consensus       144 -----------~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  212 (703)
                                 ........+...+.+++|+|++ +|++|+.|++|++||+++++++..+...  ..+.+|...|++++|+
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~~~~~~--~~l~~h~~~V~~l~~s  240 (393)
T d1sq9a_         164 TLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQ--HSMINNSNSIRSVKFS  240 (393)
T ss_dssp             TTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECC--C---CCCCCEEEEEEC
T ss_pred             eeeeccceecccceecccCCCCcEEEEEECCCC-EEEEEeCCCcEEEEeecccccccccccc--cccccccceEEEcccc
Confidence                       0000112234568899999998 8899999999999999999988777543  2356778899999999


Q ss_pred             cCCCEEEEEcccCCCCCeeEEECCCCCCCccceee-------------cCCccceEEEEEcCCCCEEEEEeCCC-EEEEE
Q psy7108         213 EFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARV-------------LKPEVRVFCVKFSPTGQAWVAATTEG-VHIYS  278 (703)
Q Consensus       213 pdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~-------------~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd  278 (703)
                      |+|+++++++.++   ....+++||+.+++.+..+             .+|...|++++|+||+++|++++.|+ |+|||
T Consensus       241 pdg~~l~sgs~D~---t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd  317 (393)
T d1sq9a_         241 PQGSLLAIAHDSN---SFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWD  317 (393)
T ss_dssp             SSTTEEEEEEEET---TEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred             cccceeeeecCCC---CcceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEEE
Confidence            9999999887653   2247999999998766654             37899999999999999999999999 99999


Q ss_pred             cCCCceeccee----------eeEEEccchhhhHhhcCC
Q psy7108         279 LDSGYVFDPFL----------LDISITPQSVKEALADKD  307 (703)
Q Consensus       279 ~~~~~~~~~~~----------~~~~~spd~~~~~l~sg~  307 (703)
                      +++++++..+.          ..++++|++  ..+++++
T Consensus       318 ~~~g~~~~~l~gH~~~v~~~~~~~~~~~~~--~~~~~~~  354 (393)
T d1sq9a_         318 VKTKERITTLNMHCDDIEIEEDILAVDEHG--DSLAEPG  354 (393)
T ss_dssp             TTTTEEEEEEECCGGGCSSGGGCCCBCTTS--CBCSSCC
T ss_pred             CCCCCEEEEECCcCCcccCCccEEEECCCC--CEEEEcc
Confidence            99998876653          236778877  5555544

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.90  E-value=5.2e-23  Score=211.32  Aligned_cols=229  Identities=13%  Similarity=0.137  Sum_probs=159.0

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCce---eEEEecCCCcEEEEEEecCC-CEEEEEECCCeEE
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDT---QHETIQLLSDALCVAYKPDG-TEIVVATLDGQLI  116 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~---~~~~~~~~~~V~~v~~spdg-~~las~s~dg~I~  116 (703)
                      +++++|++.|++++|+|  ++++||+||.||+|+|||+.++..   ......|.++|.+++|+|++ ..|++|+.|+.|+
T Consensus         5 ~~~~~h~d~I~~l~fsp--~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~   82 (342)
T d1yfqa_           5 QIEQAPKDYISDIKIIP--SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEIL   82 (342)
T ss_dssp             ECSSCCSSCEEEEEEEG--GGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEE
T ss_pred             EcCCCCCCCEEEEEEeC--CCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEccccccee
Confidence            78899999999999999  999999999999999999976543   33444699999999999875 5789999999999


Q ss_pred             EEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccC
Q psy7108         117 MFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQN  196 (703)
Q Consensus       117 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~  196 (703)
                      +|++..+........+..                   .......+.+++..+++++.|+++++||++++...........
T Consensus        83 ~w~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~  143 (342)
T d1yfqa_          83 KVDLIGSPSFQALTNNEA-------------------NLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLN  143 (342)
T ss_dssp             EECSSSSSSEEECBSCCC-------------------CSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESC
T ss_pred             eeeccccccccccccccc-------------------ccccccccccccccccccccccccceeeccccccceeeecccc
Confidence            999998877665554432                   1344556677888999999999999999875433322221111


Q ss_pred             CccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcc---------------------------------
Q psy7108         197 KSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDM---------------------------------  243 (703)
Q Consensus       197 ~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~---------------------------------  243 (703)
                      ...  .........+.+.+..++.++.++      .+++||+...+.                                 
T Consensus       144 ~~~--~~~~~~~~~~~~~~~~~~~~~~d~------~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d  215 (342)
T d1yfqa_         144 SNN--TKVKNKIFTMDTNSSRLIVGMNNS------QVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSID  215 (342)
T ss_dssp             SSS--SSSCCCEEEEEECSSEEEEEESTT------EEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETT
T ss_pred             ccc--ccceeeeeeeeccCCceeeecCCC------cEEEEecccCcccceeeeecccccceeeeEeecCCCCEEEeecCC
Confidence            000  001122233344444444433332      344443322110                                 


Q ss_pred             -------------c---------------eeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceeccee-----
Q psy7108         244 -------------A---------------ARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPFL-----  289 (703)
Q Consensus       244 -------------~---------------~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~~-----  289 (703)
                                   .               .....|...|++++|+|++++|++|+.|| |++||+++++.+..+.     
T Consensus       216 g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~~l~~~~~~~~~  295 (342)
T d1yfqa_         216 GRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNED  295 (342)
T ss_dssp             SEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSS
T ss_pred             CeEEEEEecCCcceeeccccceeeeeeeccCCCcccccceeEEecCCccEEEEECCCCEEEEEECCCCcEEEEecCCCCC
Confidence                         0               01123455688999999999999999999 9999999988765443     


Q ss_pred             eeEEEccch
Q psy7108         290 LDISITPQS  298 (703)
Q Consensus       290 ~~~~~spd~  298 (703)
                      ..++++|++
T Consensus       296 ~~~~~s~~~  304 (342)
T d1yfqa_         296 SVVKIACSD  304 (342)
T ss_dssp             EEEEEEECS
T ss_pred             EEEEEEeCC
Confidence            347777877

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.90  E-value=2.7e-22  Score=207.58  Aligned_cols=246  Identities=11%  Similarity=0.180  Sum_probs=187.9

Q ss_pred             ccccCCCcCe-EEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEE
Q psy7108          41 EVLSGHEGPV-SCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFD  119 (703)
Q Consensus        41 ~~l~gH~~~V-~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd  119 (703)
                      .+|+||.+.| +|++  +  ++++|+||+.||+|+|||+.+++.+..+..|.+.|.+++|+|+ ..|++|+.|++|++|+
T Consensus         6 ~tL~GH~~~vitc~~--~--~~~~l~tgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~l~~s~~-~~l~s~s~D~~i~iw~   80 (355)
T d1nexb2           6 TTLRGHMTSVITCLQ--F--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHG-GILVSGSTDRTVRVWD   80 (355)
T ss_dssp             EEEECCSSSCEEEEE--E--ETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEEETT-TEEEEEETTCCEEEEE
T ss_pred             EEECCcCCCcEEEEE--E--CCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCCEEEEEEcCC-CEEEEEeccccccccc
Confidence            5789998886 5655  4  6689999999999999999999888888889999999999985 5899999999999999


Q ss_pred             cCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCcc
Q psy7108         120 VESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSL  199 (703)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~  199 (703)
                      ....+..........                  ........++++++.+++++.|+.|++||+++...............
T Consensus        81 ~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~  142 (355)
T d1nexb2          81 IKKGCCTHVFEGHNS------------------TVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPL  142 (355)
T ss_dssp             TTTTEEEEEECCCSS------------------CEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCE
T ss_pred             ccccccccccccccc------------------cccccccccccccceeeeecCCCcEEEEEccCCceeccccccceecc
Confidence            999887766554432                  22456677889999999999999999999988765443321111000


Q ss_pred             c-----c--------ccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEE
Q psy7108         200 D-----G--------INDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAW  266 (703)
Q Consensus       200 ~-----~--------~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l  266 (703)
                      .     .        .........+.++++.++.+..++      .+++||+.+++......++...+.++.|+|+++.+
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~------~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (355)
T d1nexb2         143 VFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDN------TLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRC  216 (355)
T ss_dssp             EESCTTTCTTEEEEEECCSSCEEEEEEETTEEEEEETTS------CEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEE
T ss_pred             ceeccccccceeeeeeeccccccccccccceeeeecccc------eeeeeecccccceeeeeccccccccccccccceee
Confidence            0     0        000112234567788888777653      79999999999888888899999999999999999


Q ss_pred             EEEeCCC-EEEEEcCCCceeccee------eeEEEccchhhhHhhcCCcceEEEEEEecCc
Q psy7108         267 VAATTEG-VHIYSLDSGYVFDPFL------LDISITPQSVKEALADKDYAKALMMSLKLNE  320 (703)
Q Consensus       267 ~s~s~Dg-v~iwd~~~~~~~~~~~------~~~~~spd~~~~~l~sg~~~~~l~la~~l~~  320 (703)
                      ++++.|+ +++|+..++.....+.      ..+++++    ..+++++.++.+++ |++++
T Consensus       217 ~~~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~~~----~~l~~~~~dg~i~i-wd~~~  272 (355)
T d1nexb2         217 ISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSD----KFLVSAAADGSIRG-WDAND  272 (355)
T ss_dssp             EEEETTSCEEEEETTTCCEEEEECCCSSCCCEEEECS----SEEEEECTTSEEEE-EETTT
T ss_pred             ecccccceEEeeecccccccccccccccccccccccc----ceeeeeeccccccc-ccccc
Confidence            9999999 9999999988755443      4566654    46888999999998 98764

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.90  E-value=1.1e-22  Score=210.67  Aligned_cols=269  Identities=14%  Similarity=0.155  Sum_probs=195.4

Q ss_pred             ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCC--CcEEEEEEecCCC
Q psy7108          28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLL--SDALCVAYKPDGT  104 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~--~~V~~v~~spdg~  104 (703)
                      +++|| .+++++  .++.+|.++|++++|+|  + ++|++|+.|++|++|+..............  .......+++++.
T Consensus        35 i~vWd~~~~~~~--~~l~~H~~~V~~l~~s~--~-~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (355)
T d1nexb2          35 IRVYDSINKKFL--LQLSGHDGGVWALKYAH--G-GILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIK  109 (355)
T ss_dssp             EEEEETTTTEEE--EEEECCSSCEEEEEEET--T-TEEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEEEEETTEE
T ss_pred             EEEEECCCCcEE--EEEECCCCCEEEEEEcC--C-CEEEEEecccccccccccccccccccccccccccccccccccccc
Confidence            66676 478888  99999999999999998  5 589999999999999998876555444433  3345677889999


Q ss_pred             EEEEEECCCeEEEEEcCCCcEEEEEeccccCCC---CCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEE
Q psy7108         105 EIVVATLDGQLIMFDVESAAQVGSVEARRDLDS---GRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYS  181 (703)
Q Consensus       105 ~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD  181 (703)
                      .+++++.|+.|++||+++...............   ..............|...+.  .+.++++.+++++.|+.|++||
T Consensus       110 ~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~~~~~~~~~~~d~~i~~~d  187 (355)
T d1nexb2         110 YIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVR--TVSGHGNIVVSGSYDNTLIVWD  187 (355)
T ss_dssp             EEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECCSSCEE--EEEEETTEEEEEETTSCEEEEE
T ss_pred             eeeeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeeeeecccccc--ccccccceeeeecccceeeeee
Confidence            999999999999999988765543332211000   00000111111222333443  4556789999999999999999


Q ss_pred             CCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcC
Q psy7108         182 SREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSP  261 (703)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~sp  261 (703)
                      +++++.+.....+..        .+.++.++|++..+++++.++      .+++||.+++.....+.+|...|.++++++
T Consensus       188 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~d~------~i~i~d~~~~~~~~~~~~h~~~v~~~~~~~  253 (355)
T d1nexb2         188 VAQMKCLYILSGHTD--------RIYSTIYDHERKRCISASMDT------TIRIWDLENGELMYTLQGHTALVGLLRLSD  253 (355)
T ss_dssp             TTTTEEEEEECCCSS--------CEEEEEEETTTTEEEEEETTS------CEEEEETTTCCEEEEECCCSSCCCEEEECS
T ss_pred             cccccceeeeecccc--------ccccccccccceeeecccccc------eEEeeecccccccccccccccccccccccc
Confidence            999988777654433        678899999999999888764      799999999999999999999999999874


Q ss_pred             CCCEEEEEeCCC-EEEEEcCCCceeccee-----eeEEEccchhhhHhhcCCcceEEEEEEecCchhH
Q psy7108         262 TGQAWVAATTEG-VHIYSLDSGYVFDPFL-----LDISITPQSVKEALADKDYAKALMMSLKLNEQGL  323 (703)
Q Consensus       262 dg~~l~s~s~Dg-v~iwd~~~~~~~~~~~-----~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~~~  323 (703)
                        ++|++++.|| |++||+.++.......     ....+++++  .+++++ .++.+++ |++...+.
T Consensus       254 --~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~g-~d~~i~v-wd~~tg~~  315 (355)
T d1nexb2         254 --KFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSD--NILVSG-SENQFNI-YNLRSGKL  315 (355)
T ss_dssp             --SEEEEECTTSEEEEEETTTCCEEEEEECTTCCCCCEEEECS--SEEEEE-ETTEEEE-EETTTCCB
T ss_pred             --ceeeeeecccccccccccccceecccccCCceEEEEEcCCC--CEEEEE-eCCEEEE-EECCCCCE
Confidence              6899999999 9999998876532221     224566777  556655 4788998 99876543

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.90  E-value=3.1e-22  Score=207.65  Aligned_cols=205  Identities=13%  Similarity=0.126  Sum_probs=164.4

Q ss_pred             cccCCCcCeEEEEEcCCCCCCEEEEEeC--CCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCE-EEEEECCCeEEEE
Q psy7108          42 VLSGHEGPVSCIEFSPVLSSTGMVSASW--DKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTE-IVVATLDGQLIMF  118 (703)
Q Consensus        42 ~l~gH~~~V~~l~~sp~~dg~~L~sgs~--Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~-las~s~dg~I~vw  118 (703)
                      .+..|.++|.+++|+|  ++.+|++++.  ++.+++|+.++++....+..|...|.+++|+|++.. +++++.|+.+++|
T Consensus       110 ~~~~~~~~v~~v~~s~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~  187 (325)
T d1pgua1         110 EFQVLAGPISDISWDF--EGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFY  187 (325)
T ss_dssp             EEECCSSCEEEEEECT--TSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEE
T ss_pred             ccccccCcEEEEEECC--CCCccceeeccccceEEEEeecccccceeeeecccccccccccccccceEEEeecccccccc
Confidence            3567899999999999  9999988764  678999999988877888889999999999999875 6789999999999


Q ss_pred             EcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC-CCEEEEEecCCcEEEEECCCCceEEEEEeccCC
Q psy7108         119 DVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD-GSCILAAGQSKYICIYSSREGILLKKFTITQNK  197 (703)
Q Consensus       119 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd-g~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~  197 (703)
                      |..+.+.......+.                 .|...|.+++|+|+ +.++++++.|+.|++||+++++.+..+..+.. 
T Consensus       188 d~~~~~~~~~~~~~~-----------------~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~~~~-  249 (325)
T d1pgua1         188 QGPPFKFSASDRTHH-----------------KQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQE-  249 (325)
T ss_dssp             ETTTBEEEEEECSSS-----------------CTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTB-
T ss_pred             cccccccceeccccc-----------------CCCCccEEeeeccccceeccccccccceeeeeecccccccccccccc-
Confidence            999887776665543                 24557999999996 68899999999999999999999888765544 


Q ss_pred             ccccccccceeeeec---cCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCcc--ceEEEEEcCC-CCEEEEEeC
Q psy7108         198 SLDGINDFINRRKMT---EFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEV--RVFCVKFSPT-GQAWVAATT  271 (703)
Q Consensus       198 ~~~~~~~~v~~~~~s---pdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~--~V~~l~~spd-g~~l~s~s~  271 (703)
                             .+..+.|+   |+|+++++++.++      .|++||+++++++..+..|..  .+..+++.+. +..+++++.
T Consensus       250 -------~v~~~~~s~~~~dg~~l~s~s~D~------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~  316 (325)
T d1pgua1         250 -------PVQGGIFALSWLDSQKFATVGADA------TIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSL  316 (325)
T ss_dssp             -------CCCSCEEEEEESSSSEEEEEETTS------EEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEET
T ss_pred             -------ccccceeeeeccCCCEEEEEeCCC------eEEEEECCCCCEEEEEEecCCcccCeEEEEEECCCCEEEEEEC
Confidence                   44444444   6888888877664      899999999998877665443  3334444332 347899999


Q ss_pred             CC-EEEEEc
Q psy7108         272 EG-VHIYSL  279 (703)
Q Consensus       272 Dg-v~iwd~  279 (703)
                      || |++||+
T Consensus       317 dg~i~vwdl  325 (325)
T d1pgua1         317 DGTLNFYEL  325 (325)
T ss_dssp             TSCEEEEET
T ss_pred             CCEEEEEEC
Confidence            99 999996

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=5.6e-21  Score=191.79  Aligned_cols=246  Identities=13%  Similarity=0.217  Sum_probs=182.7

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEc
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDV  120 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~  120 (703)
                      .....|...|+|++  +  ++++||||+.||+|+|||+.+++....+..|.+.|.+++|  ++++|++|+.|+.|++|++
T Consensus         9 ~~~~~~~~~V~c~~--~--d~~~l~sgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~v~~--~~~~l~s~s~D~~i~~~~~   82 (293)
T d1p22a2           9 HCRSETSKGVYCLQ--Y--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDV   82 (293)
T ss_dssp             ECCCSSCCCEEEEE--C--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEES
T ss_pred             eccCCCCCCEEEEE--E--cCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEeeeec--ccceeeccccccccccccc
Confidence            45677889999865  5  7899999999999999999999888888889999999876  5789999999999999999


Q ss_pred             CCCcEEEEEeccccCCCC-----------------------CCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcE
Q psy7108         121 ESAAQVGSVEARRDLDSG-----------------------RLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYI  177 (703)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I  177 (703)
                      ..+...............                       .............|...+..+.+.+  ..+++++.|+.|
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~s~d~~i  160 (293)
T d1p22a2          83 NTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD--KYIVSASGDRTI  160 (293)
T ss_dssp             SSCCEEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEET--TEEEEEETTSEE
T ss_pred             ccccccccccccccccccccccccceeecccccceeEeeccccccccccccccccccccccceecc--cccccccCCCce
Confidence            988766554433211000                       0000011112234566777766654  568889999999


Q ss_pred             EEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEE
Q psy7108         178 CIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCV  257 (703)
Q Consensus       178 ~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l  257 (703)
                      ++||+++++.+..+..+..        .+..+.+  ++..+++++.++      .|++||+++.+.+....++...+.. 
T Consensus       161 ~~~d~~~~~~~~~~~~~~~--------~v~~~~~--~~~~l~~~~~dg------~i~i~d~~~~~~~~~~~~~~~~v~~-  223 (293)
T d1p22a2         161 KVWNTSTCEFVRTLNGHKR--------GIACLQY--RDRLVVSGSSDN------TIRLWDIECGACLRVLEGHEELVRC-  223 (293)
T ss_dssp             EEEETTTCCEEEEEECCSS--------CEEEEEE--ETTEEEEEETTS------CEEEEETTTCCEEEEECCCSSCEEE-
T ss_pred             eeecCCCCcEEEEEccccc--------ccccccC--CCCeEEEecCCC------EEEEEecccceeeeeecccceeeee-
Confidence            9999999999888775443        4544444  566777777654      7999999999988888888888765 


Q ss_pred             EEcCCCCEEEEEeCCC-EEEEEcCCCce---------ec------ceeeeEEEccchhhhHhhcCCcceEEEEEEe
Q psy7108         258 KFSPTGQAWVAATTEG-VHIYSLDSGYV---------FD------PFLLDISITPQSVKEALADKDYAKALMMSLK  317 (703)
Q Consensus       258 ~~spdg~~l~s~s~Dg-v~iwd~~~~~~---------~~------~~~~~~~~spd~~~~~l~sg~~~~~l~la~~  317 (703)
                       +++++.+|++++.|| |++||+.+...         ..      ..+.+++++  +  ..+++++.|+.+++ |+
T Consensus       224 -~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~H~~~V~~v~~d--~--~~l~s~s~Dg~i~i-WD  293 (293)
T d1p22a2         224 -IRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD--E--FQIVSSSHDDTILI-WD  293 (293)
T ss_dssp             -EECCSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEEC--S--SCEEECCSSSEEEE-EC
T ss_pred             -ccccceEEEEEcCCCEEEEEECCCCccccccCCceeeEEecCCCCCEEEEEEc--C--CEEEEEecCCEEEE-eC
Confidence             567888999999999 99999754321         11      122456664  4  56899999999998 74

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=9.2e-21  Score=194.78  Aligned_cols=213  Identities=18%  Similarity=0.280  Sum_probs=159.9

Q ss_pred             ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecC----------------
Q psy7108          28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQL----------------   90 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~----------------   90 (703)
                      +++|| .+++++  +++.+|.+.|.+++|+|    ++|++|+.|+++++|+............+                
T Consensus        39 i~vWd~~~~~~~--~~~~~h~~~V~~v~~~~----~~l~s~s~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (342)
T d2ovrb2          39 LKVWSAVTGKCL--RTLVGHTGGVWSSQMRD----NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVS  112 (342)
T ss_dssp             EEEEETTTCCEE--EECCCCSSCEEEEEEET----TEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEE
T ss_pred             EEEEECCCCCEE--EEEeCCCCCEEEEEeCC----CccccceecccccccccccccceecccccceeEeeeecccccccc
Confidence            66777 588998  99999999999999988    49999999999999997543211100000                


Q ss_pred             --------------------------------------------------------------CCcEEEEEEecCCCEEEE
Q psy7108          91 --------------------------------------------------------------LSDALCVAYKPDGTEIVV  108 (703)
Q Consensus        91 --------------------------------------------------------------~~~V~~v~~spdg~~las  108 (703)
                                                                                    ........+++++..+++
T Consensus       113 ~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~s  192 (342)
T d2ovrb2         113 GSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVS  192 (342)
T ss_dssp             EETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEECSSEEEE
T ss_pred             cccceeEEEeecccccceeeeecccccceeeccccceeeeecCCCeEEEeecccceeeEEEcCcccccccccCCCCEEEE
Confidence                                                                          001123344556777888


Q ss_pred             EECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceE
Q psy7108         109 ATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILL  188 (703)
Q Consensus       109 ~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~  188 (703)
                      ++.||.|++||+++++.+..+.+|..                    .+.+++++  +++|++++.|+.|++||+...+..
T Consensus       193 ~~~dg~i~~~d~~~~~~~~~~~~~~~--------------------~v~~~~~~--~~~l~s~s~d~~i~iwd~~~~~~~  250 (342)
T d2ovrb2         193 GSLDTSIRVWDVETGNCIHTLTGHQS--------------------LTSGMELK--DNILVSGNADSTVKIWDIKTGQCL  250 (342)
T ss_dssp             EETTSCEEEEETTTCCEEEEECCCCS--------------------CEEEEEEE--TTEEEEEETTSCEEEEETTTCCEE
T ss_pred             EeCCCeEEEeecccceeeeEeccccc--------------------ceeEEecC--CCEEEEEcCCCEEEEEeccccccc
Confidence            88888888888888877777776654                    78777766  569999999999999999998887


Q ss_pred             EEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeec-----CCccceEEEEEcCCC
Q psy7108         189 KKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL-----KPEVRVFCVKFSPTG  263 (703)
Q Consensus       189 ~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~-----~h~~~V~~l~~spdg  263 (703)
                      ..+..+..     +...+.++.+  +++++++++.++      .|++||+++++.+..+.     +|...|++++|+|++
T Consensus       251 ~~~~~~~~-----~~~~~~~~~~--~~~~~~s~s~Dg------~i~iwd~~tg~~i~~~~~~~~~~~~~~v~~v~~s~~~  317 (342)
T d2ovrb2         251 QTLQGPNK-----HQSAVTCLQF--NKNFVITSSDDG------TVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTK  317 (342)
T ss_dssp             EEECSTTS-----CSSCEEEEEE--CSSEEEEEETTS------EEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSE
T ss_pred             ccccccce-----eeeceeeccc--CCCeeEEEcCCC------EEEEEECCCCCEEEEEecccCCCCCCCEEEEEECCCC
Confidence            77764433     3334454444  566777777653      89999999998877654     466789999999999


Q ss_pred             CEEEEEeCCC-----EEEEEcCC
Q psy7108         264 QAWVAATTEG-----VHIYSLDS  281 (703)
Q Consensus       264 ~~l~s~s~Dg-----v~iwd~~~  281 (703)
                      .++++|+.||     +++||++.
T Consensus       318 ~~la~g~~dGt~~~~l~~~Df~~  340 (342)
T d2ovrb2         318 LVCAVGSRNGTEETKLLVLDFDV  340 (342)
T ss_dssp             EEEEEECSSSSSCCEEEEEECCC
T ss_pred             CEEEEEeCCCCCeeEEEEEeCCC
Confidence            9999999887     78999864

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.86  E-value=5.2e-21  Score=203.71  Aligned_cols=205  Identities=12%  Similarity=0.133  Sum_probs=161.6

Q ss_pred             CCCcCeEEEEEcCCC---CCCEEEEEeCCCcEEEEEcCCCce--------------eEEE----ecCCCcEEEEEEecCC
Q psy7108          45 GHEGPVSCIEFSPVL---SSTGMVSASWDKTVKLWNAVETDT--------------QHET----IQLLSDALCVAYKPDG  103 (703)
Q Consensus        45 gH~~~V~~l~~sp~~---dg~~L~sgs~Dg~V~iWd~~~~~~--------------~~~~----~~~~~~V~~v~~spdg  103 (703)
                      .+...+.+++|.+..   .+.++++++.||++++|++.....              ....    ..+...+.+++|+|++
T Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg  196 (393)
T d1sq9a_         117 MKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG  196 (393)
T ss_dssp             GGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS
T ss_pred             cCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccceeeeeeccceecccceecccCCCCcEEEEEECCCC
Confidence            356678888888720   146889999999999999843210              0111    1244568899999997


Q ss_pred             CEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCc---EEEE
Q psy7108         104 TEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKY---ICIY  180 (703)
Q Consensus       104 ~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~---I~lw  180 (703)
                       +||+|+.|++|++||+++++.+..++....              ...|...|.+++|+|||++|++|+.|++   |++|
T Consensus       197 -~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~--------------l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~lw  261 (393)
T d1sq9a_         197 -LIATGFNNGTVQISELSTLRPLYNFESQHS--------------MINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLY  261 (393)
T ss_dssp             -EEEEECTTSEEEEEETTTTEEEEEEECCC-----------------CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEE
T ss_pred             -EEEEEeCCCcEEEEeecccccccccccccc--------------cccccceEEEcccccccceeeeecCCCCcceeeec
Confidence             899999999999999999998887765432              2345679999999999999999999874   9999


Q ss_pred             ECCCCceEEEEEeccC-----CccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceE
Q psy7108         181 SSREGILLKKFTITQN-----KSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVF  255 (703)
Q Consensus       181 D~~~~~~~~~~~~~~~-----~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~  255 (703)
                      |+++++++..+.....     ....+|...|++++|+|+++++++++.++      +|++||+++++++..+.+|...|.
T Consensus       262 d~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~------~v~vWd~~~g~~~~~l~gH~~~v~  335 (393)
T d1sq9a_         262 ETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDG------KLRFWDVKTKERITTLNMHCDDIE  335 (393)
T ss_dssp             ETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTS------EEEEEETTTTEEEEEEECCGGGCS
T ss_pred             ccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCCC------EEEEEECCCCCEEEEECCcCCccc
Confidence            9999999888754322     33457888999999999999999888764      999999999999999999988875


Q ss_pred             ----EEEEcCCCCEEEEEe
Q psy7108         256 ----CVKFSPTGQAWVAAT  270 (703)
Q Consensus       256 ----~l~~spdg~~l~s~s  270 (703)
                          .++|+|++..+++++
T Consensus       336 ~~~~~~~~~~~~~~~~~~~  354 (393)
T d1sq9a_         336 IEEDILAVDEHGDSLAEPG  354 (393)
T ss_dssp             SGGGCCCBCTTSCBCSSCC
T ss_pred             CCccEEEECCCCCEEEEcc
Confidence                478999998876554

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.84  E-value=1.3e-19  Score=183.16  Aligned_cols=251  Identities=11%  Similarity=0.107  Sum_probs=168.8

Q ss_pred             CCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCe
Q psy7108          35 ARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQ  114 (703)
Q Consensus        35 g~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~  114 (703)
                      ++++  ++|+||.++|++++|+|      |+||+.||+|++||+.++     ...|...|.++++++++ .+++++.|++
T Consensus         3 ~~~i--~~l~gH~~~I~~l~~s~------l~sgs~Dg~v~~Wd~~~~-----~~~h~~~V~~~~~~~~~-~~~s~s~D~~   68 (287)
T d1pgua2           3 DEVL--KTISGHNKGITALTVNP------LISGSYDGRIMEWSSSSM-----HQDHSNLIVSLDNSKAQ-EYSSISWDDT   68 (287)
T ss_dssp             EEEE--EEECCCSSCEEEEETTT------TEEEETTSCEEETTTTEE-----ECCCCSCEEEEECCSTT-CCEEEETTTE
T ss_pred             ccee--EEECCCCCceEEEEECc------EEEEeCCCeEEEEECCCC-----CCCCCCCEEEEEecCCC-eEEEEeeccc
Confidence            3556  78888888888888876      788888888888887543     23577788888887654 5677888888


Q ss_pred             EEEEEcCCCc---EEEEEeccccC---C-CCCCC------CccchhhcccCCccEEEEEEcCCCCEEEEEecCC-cEEEE
Q psy7108         115 LIMFDVESAA---QVGSVEARRDL---D-SGRLD------TDLVTREQSLKAKAVSTVCYSADGSCILAAGQSK-YICIY  180 (703)
Q Consensus       115 I~vwd~~~~~---~~~~~~~~~~~---~-~~~~~------~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg-~I~lw  180 (703)
                      +++|++.+.+   ....+..+.+-   . .....      ..............  ..++++++..+++++.++ .+++|
T Consensus        69 v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~v~~~  146 (287)
T d1pgua2          69 LKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSP--GSAVSLSQNYVAVGLEEGNTIQVF  146 (287)
T ss_dssp             EEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSC--EEEEEECSSEEEEEETTTSCEEEE
T ss_pred             cccccccccccccceeeeeeccCCceEEEeecccceeeeccceeeeeeccccce--eeeeeccCcceeeeccccceeeee
Confidence            8888765321   11111111100   0 00000      00000000011122  345677788888887765 69999


Q ss_pred             ECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccce-eecCCccceEEEEE
Q psy7108         181 SSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAA-RVLKPEVRVFCVKF  259 (703)
Q Consensus       181 D~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~-~~~~h~~~V~~l~~  259 (703)
                      ++........+.       ..+...+++++|+|+++++++++.++      .|++||..+++... ....|...|.+++|
T Consensus       147 ~~~~~~~~~~~~-------~~~~~~v~~~~~s~~~~~l~~g~~dg------~i~i~d~~~~~~~~~~~~~h~~~v~~~~~  213 (287)
T d1pgua2         147 KLSDLEVSFDLK-------TPLRAKPSYISISPSETYIAAGDVMG------KILLYDLQSREVKTSRWAFRTSKINAISW  213 (287)
T ss_dssp             ETTEEEEEEECS-------SCCSSCEEEEEECTTSSEEEEEETTS------CEEEEETTTTEEEECCSCCCSSCEEEEEE
T ss_pred             eccccceeeeee-------eccCCceeEEEeccCccccccccccc------cccceeecccccccccccccccccceeee
Confidence            987654443322       12345789999999999999888764      79999999887554 45678999999999


Q ss_pred             cCC----------CCEEEEEeCCC-EEEEEcCCCc-ee------cceeeeEEEccchhhhHhhcCCcceEEEEEEec
Q psy7108         260 SPT----------GQAWVAATTEG-VHIYSLDSGY-VF------DPFLLDISITPQSVKEALADKDYAKALMMSLKL  318 (703)
Q Consensus       260 spd----------g~~l~s~s~Dg-v~iwd~~~~~-~~------~~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l  318 (703)
                      +|+          +.++++|+.|+ |++|+++++. .+      .....++.|+|++  . +.+++.|+.+++ |++
T Consensus       214 ~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~~~h~~~V~~v~~~~~~--~-l~s~g~D~~v~i-W~i  286 (287)
T d1pgua2         214 KPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPS--T-LVSSGADACIKR-WNV  286 (287)
T ss_dssp             CCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETT--E-EEEEETTSCEEE-EEE
T ss_pred             cccccccccccCCCCeeEeecCCCeEEEEECCCCCeEEEEeCCCCCCeEEEEECCCC--E-EEEEECCCeEEE-EEE
Confidence            875          46899999999 9999987643 22      2234778999987  3 667778999998 874

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=8.5e-20  Score=182.98  Aligned_cols=203  Identities=15%  Similarity=0.280  Sum_probs=154.3

Q ss_pred             ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEE-------------------
Q psy7108          28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHET-------------------   87 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~-------------------   87 (703)
                      +++|| .+++++  +++.+|.++|++++|+    +++|+||+.|++|++|++..+......                   
T Consensus        37 i~vWd~~~~~~~--~~l~~H~~~V~~v~~~----~~~l~s~s~D~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  110 (293)
T d1p22a2          37 IKIWDKNTLECK--RILTGHTGSVLCLQYD----ERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVT  110 (293)
T ss_dssp             EEEEESSSCCEE--EEECCCSSCEEEEECC----SSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCTTEEEE
T ss_pred             EEEEECCCCcEE--EEEecCCCCEeeeecc----cceeecccccccccccccccccccccccccccccccccccccceee
Confidence            55566 478888  9999999999998874    579999999999999998765422211                   


Q ss_pred             ------------------------ecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCc
Q psy7108          88 ------------------------IQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTD  143 (703)
Q Consensus        88 ------------------------~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~  143 (703)
                                              ..|...+.++.+.  ...+++++.|+.|++||+++++.+..+.++..         
T Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~s~d~~i~~~d~~~~~~~~~~~~~~~---------  179 (293)
T d1p22a2         111 CSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKR---------  179 (293)
T ss_dssp             EETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTTCCEEEEEECCSS---------
T ss_pred             cccccceeEeeccccccccccccccccccccccceec--ccccccccCCCceeeecCCCCcEEEEEccccc---------
Confidence                                    1123334444443  45677788888889999888888888777654         


Q ss_pred             cchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcc
Q psy7108         144 LVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETR  223 (703)
Q Consensus       144 ~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~  223 (703)
                                 .+..+.++  +..+++++.|+.|++||+++...+..+..+..        .+.  .+++++..+++++.
T Consensus       180 -----------~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--------~v~--~~~~~~~~l~sg~~  236 (293)
T d1p22a2         180 -----------GIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEE--------LVR--CIRFDNKRIVSGAY  236 (293)
T ss_dssp             -----------CEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECCCSS--------CEE--EEECCSSEEEEEET
T ss_pred             -----------ccccccCC--CCeEEEecCCCEEEEEecccceeeeeecccce--------eee--eccccceEEEEEcC
Confidence                       67777665  57899999999999999999988887764433        333  46677888888776


Q ss_pred             cCCCCCeeEEECCCCCCC---------ccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEE
Q psy7108         224 ETHEGGNVVLKLPGVKKG---------DMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYS  278 (703)
Q Consensus       224 ~~~~~~~~~i~iwd~~~~---------~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd  278 (703)
                      ++      .|++||+.+.         ..+..+.+|.+.|++++|+  +++|++++.|| |+|||
T Consensus       237 dg------~i~iwd~~~~~~~~~~~~~~~~~~~~~H~~~V~~v~~d--~~~l~s~s~Dg~i~iWD  293 (293)
T d1p22a2         237 DG------KIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD--EFQIVSSSHDDTILIWD  293 (293)
T ss_dssp             TS------CEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEEC--SSCEEECCSSSEEEEEC
T ss_pred             CC------EEEEEECCCCccccccCCceeeEEecCCCCCEEEEEEc--CCEEEEEecCCEEEEeC
Confidence            64      7999986543         3456677899999999984  56899999999 99997

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.83  E-value=1.2e-20  Score=190.99  Aligned_cols=192  Identities=11%  Similarity=0.130  Sum_probs=134.4

Q ss_pred             eeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEc
Q psy7108          83 TQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYS  162 (703)
Q Consensus        83 ~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~s  162 (703)
                      .++.+.+|.++|++++|+|    |++|+.||+|++||+.++.     .+|.                    ..|.+++++
T Consensus         5 ~i~~l~gH~~~I~~l~~s~----l~sgs~Dg~v~~Wd~~~~~-----~~h~--------------------~~V~~~~~~   55 (287)
T d1pgua2           5 VLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMH-----QDHS--------------------NLIVSLDNS   55 (287)
T ss_dssp             EEEEECCCSSCEEEEETTT----TEEEETTSCEEETTTTEEE-----CCCC--------------------SCEEEEECC
T ss_pred             eeEEECCCCCceEEEEECc----EEEEeCCCeEEEEECCCCC-----CCCC--------------------CCEEEEEec
Confidence            4566778999999999987    9999999999999987643     2222                    245555555


Q ss_pred             CCCCEEEEEecCCcEEEEEC----------------------------------CCCceEEEEEeccCCcccccccccee
Q psy7108         163 ADGSCILAAGQSKYICIYSS----------------------------------REGILLKKFTITQNKSLDGINDFINR  208 (703)
Q Consensus       163 pdg~~l~s~s~dg~I~lwD~----------------------------------~~~~~~~~~~~~~~~~~~~~~~~v~~  208 (703)
                      +++ .+++++.|+++++|++                                  .+++.+..+..           ....
T Consensus        56 ~~~-~~~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~  123 (287)
T d1pgua2          56 KAQ-EYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRL-----------NSPG  123 (287)
T ss_dssp             STT-CCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEEC-----------SSCE
T ss_pred             CCC-eEEEEeeccccccccccccccccceeeeeeccCCceEEEeecccceeeeccceeeeeeccc-----------ccee
Confidence            433 3445555555555544                                  44433333321           2234


Q ss_pred             eeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeec-CCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceec
Q psy7108         209 RKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL-KPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFD  286 (703)
Q Consensus       209 ~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~-~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~  286 (703)
                      .++++++..+++++.++     ..+++|++...+...... .|...+++++|+|++.+|++++.|| |++||+.++....
T Consensus       124 ~~~~~~~~~~~v~~~~~-----~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~  198 (287)
T d1pgua2         124 SAVSLSQNYVAVGLEEG-----NTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKT  198 (287)
T ss_dssp             EEEEECSSEEEEEETTT-----SCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred             eeeeccCcceeeecccc-----ceeeeeeccccceeeeeeeccCCceeEEEeccCccccccccccccccceeeccccccc
Confidence            56788888888877654     368999987665544443 4778899999999999999999999 9999998876532


Q ss_pred             -------ceeeeEEEccchhh--------hHhhcCCcceEEEEEEecCch
Q psy7108         287 -------PFLLDISITPQSVK--------EALADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       287 -------~~~~~~~~spd~~~--------~~l~sg~~~~~l~la~~l~~~  321 (703)
                             ....+++|+|++..        .++++++.|+.+++ |++..+
T Consensus       199 ~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~i-w~~~~~  247 (287)
T d1pgua2         199 SRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFI-YSVKRP  247 (287)
T ss_dssp             CCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEE-EESSCT
T ss_pred             ccccccccccceeeecccccccccccCCCCeeEeecCCCeEEE-EECCCC
Confidence                   22456888875421        46788889999998 988654

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.83  E-value=8.8e-20  Score=189.79  Aligned_cols=251  Identities=9%  Similarity=0.050  Sum_probs=180.5

Q ss_pred             ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCC--cEEEEEcCCCceeEEEecCCCcEEEEEEecCCCE
Q psy7108          28 VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDK--TVKLWNAVETDTQHETIQLLSDALCVAYKPDGTE  105 (703)
Q Consensus        28 v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg--~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~  105 (703)
                      +.+||..+..+  ..+ +|...|++++|+|  ||++|++++.+.  .|++||.+++ ....+..|...|.+++|+|||++
T Consensus        26 v~v~d~~~~~~--~~~-~~~~~v~~~~~sp--Dg~~l~~~~~~~g~~v~v~d~~~~-~~~~~~~~~~~v~~~~~spdg~~   99 (360)
T d1k32a3          26 AFIQDVSGTYV--LKV-PEPLRIRYVRRGG--DTKVAFIHGTREGDFLGIYDYRTG-KAEKFEENLGNVFAMGVDRNGKF   99 (360)
T ss_dssp             EEEECTTSSBE--EEC-SCCSCEEEEEECS--SSEEEEEEEETTEEEEEEEETTTC-CEEECCCCCCSEEEEEECTTSSE
T ss_pred             EEEEECCCCcE--EEc-cCCCCEEEEEECC--CCCEEEEEEcCCCCEEEEEECCCC-cEEEeeCCCceEEeeeecccccc
Confidence            44555444444  444 6999999999999  999998876553  7899999876 56677789999999999999999


Q ss_pred             EEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe----------cCC
Q psy7108         106 IVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG----------QSK  175 (703)
Q Consensus       106 las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s----------~dg  175 (703)
                      |++++.++.+++|++.+++....+..+..                    .+.+++|+|||++|+.++          .++
T Consensus       100 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~spdg~~la~~~~~~~~~~~~~~~~  159 (360)
T d1k32a3         100 AVVANDRFEIMTVDLETGKPTVIERSREA--------------------MITDFTISDNSRFIAYGFPLKHGETDGYVMQ  159 (360)
T ss_dssp             EEEEETTSEEEEEETTTCCEEEEEECSSS--------------------CCCCEEECTTSCEEEEEEEECSSTTCSCCEE
T ss_pred             cceeccccccccccccccceeeeeecccc--------------------cccchhhccceeeeeeeccccccceeecccc
Confidence            99999999999999999998888877654                    678899999999998653          345


Q ss_pred             cEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcc------------
Q psy7108         176 YICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDM------------  243 (703)
Q Consensus       176 ~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~------------  243 (703)
                      .+++||+.+++......         +...+..++|+|+|+.+++.+.++      .+.+||......            
T Consensus       160 ~~~v~d~~~~~~~~~~~---------~~~~~~~~~~spdg~~l~~~s~~~------~~~~~d~~~~~~~~~~~~~~~~~~  224 (360)
T d1k32a3         160 AIHVYDMEGRKIFAATT---------ENSHDYAPAFDADSKNLYYLSYRS------LDPSPDRVVLNFSFEVVSKPFVIP  224 (360)
T ss_dssp             EEEEEETTTTEEEECSC---------SSSBEEEEEECTTSCEEEEEESCC------CCCEECSSSSCEECCSCBEEEEEE
T ss_pred             ceeeeccccCceeeecc---------cccccccccccCCCCEEEEEeCCC------ceEcccccccceeeccccceEEEe
Confidence            69999999876543321         223667889999999998877543      333444322110            


Q ss_pred             -------------------------------ceeecCCccceEEEEEcCCCC-------------EEEEEeCCC-EEEEE
Q psy7108         244 -------------------------------AARVLKPEVRVFCVKFSPTGQ-------------AWVAATTEG-VHIYS  278 (703)
Q Consensus       244 -------------------------------~~~~~~h~~~V~~l~~spdg~-------------~l~s~s~Dg-v~iwd  278 (703)
                                                     +..+....+....+...+++.             ++++++.++ +++||
T Consensus       225 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d  304 (360)
T d1k32a3         225 LIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYD  304 (360)
T ss_dssp             SSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEE
T ss_pred             cccCccccceECCCcCcccccceeecccccceeecccCcCceeEeeecCCCceEEEEEecCCCeeEEEecCCCCEEEEEE
Confidence                                           000000111223333333322             345556677 89999


Q ss_pred             cCCCceec--ceeeeEEEccchhhhHhhcCCcceEEEEEEecCchh
Q psy7108         279 LDSGYVFD--PFLLDISITPQSVKEALADKDYAKALMMSLKLNEQG  322 (703)
Q Consensus       279 ~~~~~~~~--~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~~  322 (703)
                      +.+++...  ....+++||||+  ..|+.++.|+.+++ |+++.+.
T Consensus       305 ~~~~~~~~~~~~v~~~~~SpDG--~~l~~~~~Dg~i~v-~d~~~~~  347 (360)
T d1k32a3         305 VKTRKVTEVKNNLTDLRLSADR--KTVMVRKDDGKIYT-FPLEKPE  347 (360)
T ss_dssp             TTTCCEEEEEEEEEEEEECTTS--CEEEEEETTSCEEE-EESSCTT
T ss_pred             CCCCeEEEecCCcCEEEECCCC--CEEEEEECCCeEEE-EECCCCC
Confidence            98876532  234678999999  88899999999998 9887653

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.83  E-value=9.6e-20  Score=196.11  Aligned_cols=271  Identities=13%  Similarity=0.046  Sum_probs=187.8

Q ss_pred             CceEEecCCceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeE--EEe---cCCCc
Q psy7108          19 GNVVLKLPGVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQH--ETI---QLLSD   93 (703)
Q Consensus        19 ~~~~i~~~~v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~--~~~---~~~~~   93 (703)
                      .+..+++|+..    +++++  .++..|. .+.+++|||  ||++|++++.|++|++||+.+++...  .+.   .|.+.
T Consensus        40 ~dg~v~vwD~~----t~~~~--~~l~~g~-~~~~vafSP--DGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~  110 (426)
T d1hzua2          40 DAGQIALVDGD----SKKIV--KVIDTGY-AVHISRMSA--SGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSV  110 (426)
T ss_dssp             TTTEEEEEETT----TCSEE--EEEECCS-SEEEEEECT--TSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEE
T ss_pred             CCCEEEEEECC----CCcEE--EEEeCCC-CeeEEEECC--CCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcce
Confidence            34445555444    88998  8998875 589999999  99999999999999999998886432  221   34455


Q ss_pred             EEEEEEecCCCEEEEE-ECCCeEEEEEcCCCcEEEEEeccccCCCCC---------------CC---------C------
Q psy7108          94 ALCVAYKPDGTEIVVA-TLDGQLIMFDVESAAQVGSVEARRDLDSGR---------------LD---------T------  142 (703)
Q Consensus        94 V~~v~~spdg~~las~-s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~---------------~~---------~------  142 (703)
                      +.+++|+|||++++++ ..++.+.+||..+++....+..+.......               ..         .      
T Consensus       111 ~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~  190 (426)
T d1hzua2         111 ESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLV  190 (426)
T ss_dssp             EECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEE
T ss_pred             EEeeeecCCCCEEEEeecCCCeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCCeEEEE
Confidence            6677888999987554 578999999999998887776543211100               00         0      


Q ss_pred             -----ccchhhcccCCccEEEEEEcCCCCEEEEEe-cCCcEEEEECCCCceEEEEEeccC--------------------
Q psy7108         143 -----DLVTREQSLKAKAVSTVCYSADGSCILAAG-QSKYICIYSSREGILLKKFTITQN--------------------  196 (703)
Q Consensus       143 -----~~~~~~~~~~~~~V~~i~~spdg~~l~s~s-~dg~I~lwD~~~~~~~~~~~~~~~--------------------  196 (703)
                           .........+...+..++|+|++++++++. .+..+.++|..+++.+........                    
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (426)
T d1hzua2         191 NYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWST  270 (426)
T ss_dssp             ECSSSSSCEEEEEECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEEETTTEEEEEE
T ss_pred             EeccccceeeEEeccCCccEeeeECCCCcEEEeeeecccceeeeecccccEEEEeccCCcccccceeeeecCCCCceEEe
Confidence                 000011223566788999999999988776 455689999988776654431100                    


Q ss_pred             --------------------------CccccccccceeeeeccCCCEEEEEcccCC-CCCeeEEECCCCCCCccceee--
Q psy7108         197 --------------------------KSLDGINDFINRRKMTEFGNVSLIETRETH-EGGNVVLKLPGVKKGDMAARV--  247 (703)
Q Consensus       197 --------------------------~~~~~~~~~v~~~~~spdg~~l~~~~~~~~-~~~~~~i~iwd~~~~~~~~~~--  247 (703)
                                                ..+.+|...+..++|+|+|+++++...... ...+.+|++||+++++...++  
T Consensus       271 ~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~~~~  350 (426)
T d1hzua2         271 SHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLP  350 (426)
T ss_dssp             ECTTTCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEEC
T ss_pred             ccCCCceEEEeeccccccccccceEeEEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEEEECCCCCcCeEEec
Confidence                                      123455667899999999999997543211 112258999999998766544  


Q ss_pred             -------cCCccceEEEEEcCCCCEEE-EE----eCCC-EEEEEcCCCceecceeeeEEEccch
Q psy7108         248 -------LKPEVRVFCVKFSPTGQAWV-AA----TTEG-VHIYSLDSGYVFDPFLLDISITPQS  298 (703)
Q Consensus       248 -------~~h~~~V~~l~~spdg~~l~-s~----s~Dg-v~iwd~~~~~~~~~~~~~~~~spd~  298 (703)
                             ..+...|.+++|||||++++ ++    +.++ |+|||..+.+....+...-.++|+|
T Consensus       351 ~~~~~~~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~T~k~~~~i~~~~~~tp~G  414 (426)
T d1hzua2         351 IAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKDPRLITPTG  414 (426)
T ss_dssp             HHHHHCCCSSCCCEEEEEECSSSSEEEEEECCCTTSCCEEEEEETTTTEEEEEECCTTCCSEEE
T ss_pred             cchhcccCCCCccEEEEEECCCCCEEEEEEecCCCCCCeEEEEECCCCeEEEEECCCCccCCCc
Confidence                   24566799999999999774 33    2466 9999999998766554444556777

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.80  E-value=3.6e-18  Score=177.41  Aligned_cols=249  Identities=8%  Similarity=-0.056  Sum_probs=173.5

Q ss_pred             eEEeeecccCCceEEecCC----ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCcee
Q psy7108           9 LIETRETHEGGNVVLKLPG----VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQ   84 (703)
Q Consensus         9 ~~~~~~~~~~~~~~i~~~~----v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~   84 (703)
                      +....+..+|...++...+    +.+||..+...  +.+.+|...|.+++|+|  ++++|++++.++.+++|++.++...
T Consensus        45 v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~--~~~~~~~~~v~~~~~sp--dg~~l~~~~~~~~~~~~~~~~~~~~  120 (360)
T d1k32a3          45 IRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKA--EKFEENLGNVFAMGVDR--NGKFAVVANDRFEIMTVDLETGKPT  120 (360)
T ss_dssp             EEEEEECSSSEEEEEEEETTEEEEEEEETTTCCE--EECCCCCCSEEEEEECT--TSSEEEEEETTSEEEEEETTTCCEE
T ss_pred             EEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcE--EEeeCCCceEEeeeecc--cccccceecccccccccccccccee
Confidence            3344454444444333222    56788666666  78889999999999999  9999999999999999999988777


Q ss_pred             EEEecCCCcEEEEEEecCCCEEEEEEC----------CCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCc
Q psy7108          85 HETIQLLSDALCVAYKPDGTEIVVATL----------DGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAK  154 (703)
Q Consensus        85 ~~~~~~~~~V~~v~~spdg~~las~s~----------dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (703)
                      .....+...+.+++|+|||++|+++..          ++.+++||+.+++........                     .
T Consensus       121 ~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~---------------------~  179 (360)
T d1k32a3         121 VIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTEN---------------------S  179 (360)
T ss_dssp             EEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSS---------------------S
T ss_pred             eeeecccccccchhhccceeeeeeeccccccceeeccccceeeeccccCceeeecccc---------------------c
Confidence            777778889999999999999987543          346999999988765443322                     2


Q ss_pred             cEEEEEEcCCCCEEEEEecCCcEEEEECCCCce-------EEEEEeccCC------cc------------ccc-------
Q psy7108         155 AVSTVCYSADGSCILAAGQSKYICIYSSREGIL-------LKKFTITQNK------SL------------DGI-------  202 (703)
Q Consensus       155 ~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~-------~~~~~~~~~~------~~------------~~~-------  202 (703)
                      .+..++|+|||+.|++++.++.+.+||......       ......+...      ..            .+.       
T Consensus       180 ~~~~~~~spdg~~l~~~s~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~  259 (360)
T d1k32a3         180 HDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPI  259 (360)
T ss_dssp             BEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEEC
T ss_pred             ccccccccCCCCEEEEEeCCCceEcccccccceeeccccceEEEecccCccccceECCCcCcccccceeecccccceeec
Confidence            678899999999999999999999999765432       2222211110      00            000       


Q ss_pred             ---cccceeeeeccCCCEEEEEcccCC-------CCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCC
Q psy7108         203 ---NDFINRRKMTEFGNVSLIETRETH-------EGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTE  272 (703)
Q Consensus       203 ---~~~v~~~~~spdg~~l~~~~~~~~-------~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~D  272 (703)
                         ......+...+++...+.....+.       ...+..+++||+.+++..    .|.+.|.+++|||||++|++++.|
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~----~~~~~v~~~~~SpDG~~l~~~~~D  335 (360)
T d1k32a3         260 NVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVT----EVKNNLTDLRLSADRKTVMVRKDD  335 (360)
T ss_dssp             SCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEE----EEEEEEEEEEECTTSCEEEEEETT
T ss_pred             ccCcCceeEeeecCCCceEEEEEecCCCeeEEEecCCCCEEEEEECCCCeEE----EecCCcCEEEECCCCCEEEEEECC
Confidence               011122333333333222221110       123468999998876542    345679999999999999999999


Q ss_pred             C-EEEEEcCCCceec
Q psy7108         273 G-VHIYSLDSGYVFD  286 (703)
Q Consensus       273 g-v~iwd~~~~~~~~  286 (703)
                      | |++|++++++...
T Consensus       336 g~i~v~d~~~~~~~~  350 (360)
T d1k32a3         336 GKIYTFPLEKPEDER  350 (360)
T ss_dssp             SCEEEEESSCTTSCE
T ss_pred             CeEEEEECCCCCcce
Confidence            9 9999999887543

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.77  E-value=8.4e-18  Score=181.06  Aligned_cols=261  Identities=12%  Similarity=0.022  Sum_probs=180.1

Q ss_pred             ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCcee--EEEe---cCCCcEEEEEEec
Q psy7108          28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQ--HETI---QLLSDALCVAYKP  101 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~--~~~~---~~~~~V~~v~~sp  101 (703)
                      +.+|| .+++++  +.+..|. .+..++|||  ||+++++++.|+++++||+.+++..  .++.   .|.+.+.+.+|+|
T Consensus        44 v~v~D~~t~~v~--~~~~~g~-~~~~v~fSp--DG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~~s~~~Sp  118 (432)
T d1qksa2          44 IALIDGSTYEIK--TVLDTGY-AVHISRLSA--SGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGW  118 (432)
T ss_dssp             EEEEETTTCCEE--EEEECSS-CEEEEEECT--TSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTC
T ss_pred             EEEEECCCCcEE--EEEeCCC-CeeEEEECC--CCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCeEEecccCC
Confidence            44555 488998  8888774 699999999  9999999999999999999876532  2222   2444556667788


Q ss_pred             CCCEE-EEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEE-EecCCcEEE
Q psy7108         102 DGTEI-VVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILA-AGQSKYICI  179 (703)
Q Consensus       102 dg~~l-as~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s-~s~dg~I~l  179 (703)
                      ||++| ++++.++.|++||..+++.+..+..+.....         .....+......+.++|+|..+++ ...++.|.+
T Consensus       119 DG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~---------~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~  189 (432)
T d1qksa2         119 EDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYD---------EQEYHPEPRVAAILASHYRPEFIVNVKETGKILL  189 (432)
T ss_dssp             TTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTT---------TCCEESCCCEEEEEECSSSSEEEEEETTTTEEEE
T ss_pred             CCCEEEEEcCCCCeEEEEeCccccceeeeccCCcccc---------ceeccCCCceeEEEECCCCCEEEEEEccCCeEEE
Confidence            99976 6778899999999999999998877643111         011123446778999999988654 566789999


Q ss_pred             EECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeec-----------
Q psy7108         180 YSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL-----------  248 (703)
Q Consensus       180 wD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~-----------  248 (703)
                      ||..+.+.......+..       ..+..++|+|+|+++++++.++     ..+.++|..+++......           
T Consensus       190 ~d~~~~~~~~~~~i~~g-------~~~~~~~~spdg~~~~va~~~~-----~~v~v~d~~~~~~~~~~~~g~~~~~~~~~  257 (432)
T d1qksa2         190 VDYTDLNNLKTTEISAE-------RFLHDGGLDGSHRYFITAANAR-----NKLVVIDTKEGKLVAIEDTGGQTPHPGRG  257 (432)
T ss_dssp             EETTCSSEEEEEEEECC-------SSEEEEEECTTSCEEEEEEGGG-----TEEEEEETTTTEEEEEEECSSSSBCCTTC
T ss_pred             EEccCCCcceEEEEccc-------CccccceECCCCCEEEEecccc-----ceEEEeecccceEEEEeccCccccccCcc
Confidence            99998876655443332       2567899999999988877654     356666655543322111           


Q ss_pred             ---------------------------------CCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecceeeeEEE
Q psy7108         249 ---------------------------------KPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPFLLDISI  294 (703)
Q Consensus       249 ---------------------------------~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~~~~~~~  294 (703)
                                                       .|...+....++|++..+++++.+. .++|...+..........+++
T Consensus       258 ~~~~~~~~g~~~~~~~lg~~~v~~~~~~~~~~~~~~~~v~~~~~~~~g~~~~~~s~p~~~~lw~~~~~~~~~~~~~sv~v  337 (432)
T d1qksa2         258 ANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAV  337 (432)
T ss_dssp             EEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEE
T ss_pred             cceecCCCCceecccccCCceEEecccccccccccccEEEEEEEcCCCCeEEEEecCCccceeecccCCCCCCeeeEEEE
Confidence                                             1223455556666766666666666 667766555444433444554


Q ss_pred             ccchhhhHhhcCCcceEEEEEEec
Q psy7108         295 TPQSVKEALADKDYAKALMMSLKL  318 (703)
Q Consensus       295 spd~~~~~l~sg~~~~~l~la~~l  318 (703)
                       ||+  ..+++++.++.+++ |.+
T Consensus       338 -pDg--~~la~~s~d~~~k~-w~~  357 (432)
T d1qksa2         338 -FDI--KAMTGDGSDPEFKT-LPI  357 (432)
T ss_dssp             -EEG--GGCCCSSSCCCEEE-ECH
T ss_pred             -Eec--hhhcccccCCceEe-ccc
Confidence             777  77788888888777 654

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.76  E-value=1.7e-18  Score=177.02  Aligned_cols=216  Identities=8%  Similarity=0.017  Sum_probs=147.0

Q ss_pred             cccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCC-CcEEEEEEecCCCEEEEEECCCeEEEEEc
Q psy7108          42 VLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLL-SDALCVAYKPDGTEIVVATLDGQLIMFDV  120 (703)
Q Consensus        42 ~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~-~~V~~v~~spdg~~las~s~dg~I~vwd~  120 (703)
                      ...+|.++|.+++|+|. ++.+|++|+.||+|++|++...........+. .......+.+++..+++++.|+.+++||+
T Consensus        51 ~~~~h~~~V~~v~f~~~-~~~~l~sg~~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~  129 (342)
T d1yfqa_          51 QSLRYKHPLLCCNFIDN-TDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDP  129 (342)
T ss_dssp             EEEECSSCEEEEEEEES-SSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECH
T ss_pred             EecCCCCCEEEEEEeCC-CCCEEEEcccccceeeeecccccccccccccccccccccccccccccccccccccccceeec
Confidence            33479999999999982 35689999999999999998876655555444 34455667778899999999999999998


Q ss_pred             CCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEE--------
Q psy7108         121 ESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFT--------  192 (703)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~--------  192 (703)
                      +++........+....              ..........+.+++..+++++.|+.|++||++.........        
T Consensus       130 ~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~  195 (342)
T d1yfqa_         130 RNYGDGVIAVKNLNSN--------------NTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQ  195 (342)
T ss_dssp             HHHTTBCEEEEESCSS--------------SSSSCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSC
T ss_pred             cccccceeeecccccc--------------cccceeeeeeeeccCCceeeecCCCcEEEEecccCcccceeeeecccccc
Confidence            7543322222111100              001123345556666777777777777777765432111000        


Q ss_pred             --------------------------------------------e-ccCCccccccccceeeeeccCCCEEEEEcccCCC
Q psy7108         193 --------------------------------------------I-TQNKSLDGINDFINRRKMTEFGNVSLIETRETHE  227 (703)
Q Consensus       193 --------------------------------------------~-~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~  227 (703)
                                                                  . .......++...+++++|+|+++++++++.++  
T Consensus       196 ~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg--  273 (342)
T d1yfqa_         196 IRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDG--  273 (342)
T ss_dssp             EEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTS--
T ss_pred             eeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeeccccceeeeeeeccCCCcccccceeEEecCCccEEEEECCCC--
Confidence                                                        0 00011123445678999999999999888764  


Q ss_pred             CCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEc
Q psy7108         228 GGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSL  279 (703)
Q Consensus       228 ~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~  279 (703)
                          .|++||+++++.+..+..+. .+..++|+|+++.+++++.|+ +++|..
T Consensus       274 ----~v~vWD~~~~~~l~~~~~~~-~~~~~~~s~~~~~l~~a~sdd~~~~~~~  321 (342)
T d1yfqa_         274 ----IISCWNLQTRKKIKNFAKFN-EDSVVKIACSDNILCLATSDDTFKTNAA  321 (342)
T ss_dssp             ----CEEEEETTTTEEEEECCCCS-SSEEEEEEECSSEEEEEEECTHHHHCSS
T ss_pred             ----EEEEEECCCCcEEEEecCCC-CCEEEEEEeCCCEEEEEEcCCcEEEeee
Confidence                89999999998877765432 345678889999999988888 777764

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.76  E-value=1.1e-17  Score=179.80  Aligned_cols=244  Identities=10%  Similarity=0.019  Sum_probs=165.3

Q ss_pred             CCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCC
Q psy7108          61 STGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRL  140 (703)
Q Consensus        61 g~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~  140 (703)
                      +-++++++.||+|++||+.+++.+..+..+ ..+..++|||||+++++++.|++|++||+.+++.....+-...      
T Consensus        32 ~~~~V~~~~dg~v~vwD~~t~~~~~~l~~g-~~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~------  104 (426)
T d1hzua2          32 NLFSVTLRDAGQIALVDGDSKKIVKVIDTG-YAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIG------  104 (426)
T ss_dssp             GEEEEEETTTTEEEEEETTTCSEEEEEECC-SSEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECC------
T ss_pred             eEEEEEEcCCCEEEEEECCCCcEEEEEeCC-CCeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCC------
Confidence            335688899999999999999766665544 5799999999999999999999999999998875443321110      


Q ss_pred             CCccchhhcccCCccEEEEEEcCCCCEEEEE-ecCCcEEEEECCCCceEEEEEeccCC----------------------
Q psy7108         141 DTDLVTREQSLKAKAVSTVCYSADGSCILAA-GQSKYICIYSSREGILLKKFTITQNK----------------------  197 (703)
Q Consensus       141 ~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~-s~dg~I~lwD~~~~~~~~~~~~~~~~----------------------  197 (703)
                               ..|.+.+.+++|+|||++++++ ..++.+.+||..++.+......+...                      
T Consensus       105 ---------~~~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~  175 (426)
T d1hzua2         105 ---------IEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHP  175 (426)
T ss_dssp             ---------SEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSS
T ss_pred             ---------CCCcceEEeeeecCCCCEEEEeecCCCeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCC
Confidence                     0122356778889999987655 57899999999988776654422110                      


Q ss_pred             -------------------------ccccccccceeeeeccCCCEEEEEcccCCC-------------------------
Q psy7108         198 -------------------------SLDGINDFINRRKMTEFGNVSLIETRETHE-------------------------  227 (703)
Q Consensus       198 -------------------------~~~~~~~~v~~~~~spdg~~l~~~~~~~~~-------------------------  227 (703)
                                               ...++...+..+.++|++++++++......                         
T Consensus       176 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (426)
T d1hzua2         176 EFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGR  255 (426)
T ss_dssp             EEEEEETTTTEEEEEECSSSSSCEEEEEECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCSC
T ss_pred             EEEEecCCCCeEEEEEeccccceeeEEeccCCccEeeeECCCCcEEEeeeecccceeeeecccccEEEEeccCCcccccc
Confidence                                     000122344578899999987776543210                         


Q ss_pred             -----------------CCeeEEECCCCC-------CCccceeecCCccceEEEEEcCCCCEEEE-------EeCCC-EE
Q psy7108         228 -----------------GGNVVLKLPGVK-------KGDMAARVLKPEVRVFCVKFSPTGQAWVA-------ATTEG-VH  275 (703)
Q Consensus       228 -----------------~~~~~i~iwd~~-------~~~~~~~~~~h~~~V~~l~~spdg~~l~s-------~s~Dg-v~  275 (703)
                                       .++..+.+|+..       .++....+.+|...+..++|+||+++|++       ++.++ |+
T Consensus       256 ~~~~~~~~~~~~~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~  335 (426)
T d1hzua2         256 GANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVA  335 (426)
T ss_dssp             CEEEEETTTEEEEEEECTTTCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEE
T ss_pred             eeeeecCCCCceEEeccCCCceEEEeeccccccccccceEeEEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEE
Confidence                             001122222211       12344556678888999999999999985       44566 99


Q ss_pred             EEEcCCCceecce---------------eeeEEEccchhhhHh---hcCCcceEEEEEEecCch
Q psy7108         276 IYSLDSGYVFDPF---------------LLDISITPQSVKEAL---ADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       276 iwd~~~~~~~~~~---------------~~~~~~spd~~~~~l---~sg~~~~~l~la~~l~~~  321 (703)
                      |||+.+++.....               ...++|||||...++   +.++.++++.+ |+....
T Consensus       336 vwd~~t~~~~~~~~~~~~~~~~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v-~D~~T~  398 (426)
T d1hzua2         336 VFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVV-VDDKTL  398 (426)
T ss_dssp             EEETTCTTSCCEEECHHHHHCCCSSCCCEEEEEECSSSSEEEEEECCCTTSCCEEEE-EETTTT
T ss_pred             EEECCCCCcCeEEeccchhcccCCCCccEEEEEECCCCCEEEEEEecCCCCCCeEEE-EECCCC
Confidence            9999988754332               346789999943233   23567888888 876544

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.75  E-value=3.3e-16  Score=158.00  Aligned_cols=255  Identities=13%  Similarity=0.182  Sum_probs=190.7

Q ss_pred             CceEEecCCceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEE-EEEeCCCcEEEEEcCCCceeEEEecCCCcEEEE
Q psy7108          19 GNVVLKLPGVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGM-VSASWDKTVKLWNAVETDTQHETIQLLSDALCV   97 (703)
Q Consensus        19 ~~~~i~~~~v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L-~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v   97 (703)
                      ++..|.+|++.    +++.+  +++... .....++|+|  ||++| ++++.++.|++||+.+++....+.. ...+..+
T Consensus        10 ~~~~v~v~D~~----t~~~~--~~i~~g-~~p~~va~sp--dG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~-~~~~~~~   79 (301)
T d1l0qa2          10 ESDNISVIDVT----SNKVT--ATIPVG-SNPMGAVISP--DGTKVYVANAHSNDVSIIDTATNNVIATVPA-GSSPQGV   79 (301)
T ss_dssp             TTTEEEEEETT----TTEEE--EEEECS-SSEEEEEECT--TSSEEEEEEGGGTEEEEEETTTTEEEEEEEC-SSSEEEE
T ss_pred             CCCEEEEEECC----CCeEE--EEEECC-CCceEEEEeC--CCCEEEEEECCCCEEEEEECCCCceeeeeec-ccccccc
Confidence            33445555544    78877  777644 4578999999  99977 5677889999999998866555444 4567899


Q ss_pred             EEecCCCEEEE-EECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEE-EecCC
Q psy7108          98 AYKPDGTEIVV-ATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILA-AGQSK  175 (703)
Q Consensus        98 ~~spdg~~las-~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s-~s~dg  175 (703)
                      +|++++..+++ +..++.+.+|+..+++....+..+.                     ...+++|+|+++.++. +..++
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~dg~~~~~~~~~~~  138 (301)
T d1l0qa2          80 AVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGK---------------------SPLGLALSPDGKKLYVTNNGDK  138 (301)
T ss_dssp             EECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS---------------------SEEEEEECTTSSEEEEEETTTT
T ss_pred             ccccccccccccccccceeeecccccceeeeeccccc---------------------cceEEEeecCCCeeeeeecccc
Confidence            99999986655 4567789999999999888887654                     5788999999998765 45678


Q ss_pred             cEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceE
Q psy7108         176 YICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVF  255 (703)
Q Consensus       176 ~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~  255 (703)
                      .+.+|+..+......+....         .+..++++|+++.++++..+.     ..+.+|+....+...... ....+.
T Consensus       139 ~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~-~~~~~~  203 (301)
T d1l0qa2         139 TVSVINTVTKAVINTVSVGR---------SPKGIAVTPDGTKVYVANFDS-----MSISVIDTVTNSVIDTVK-VEAAPS  203 (301)
T ss_dssp             EEEEEETTTTEEEEEEECCS---------SEEEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEEEE-CSSEEE
T ss_pred             ceeeeeccccceeeecccCC---------CceEEEeeccccceeeecccc-----cccccccccceeeeeccc-ccCCcc
Confidence            89999999998887765332         457789999999888876543     356677666655544443 335577


Q ss_pred             EEEEcCCCCEEEEEeC---CC-EEEEEcCCCceecce-----eeeEEEccchhhhH-hhcCCcceEEEEEEecCchh
Q psy7108         256 CVKFSPTGQAWVAATT---EG-VHIYSLDSGYVFDPF-----LLDISITPQSVKEA-LADKDYAKALMMSLKLNEQG  322 (703)
Q Consensus       256 ~l~~spdg~~l~s~s~---Dg-v~iwd~~~~~~~~~~-----~~~~~~spd~~~~~-l~sg~~~~~l~la~~l~~~~  322 (703)
                      .++|+++++.++.++.   ++ |.+||..+++....+     ...++|+||+  .. +.++..++.+.+ |++...+
T Consensus       204 ~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~va~spdg--~~l~va~~~~~~i~v-~D~~t~~  277 (301)
T d1l0qa2         204 GIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDG--KKVYVALSFCNTVSV-IDTATNT  277 (301)
T ss_dssp             EEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSSEEEEEECTTS--SEEEEEETTTTEEEE-EETTTTE
T ss_pred             eeeccccccccccccccceeeeeeeeecCCCeEEEEEcCCCCEEEEEEeCCC--CEEEEEECCCCeEEE-EECCCCe
Confidence            8999999998865543   34 999999998875544     3579999999  44 357777888888 8887654

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.72  E-value=2.6e-16  Score=161.25  Aligned_cols=228  Identities=14%  Similarity=0.149  Sum_probs=166.5

Q ss_pred             EEecCCceeeccCCCccccccccC--CCcCeEEEEEcCCCCCCEE-EEEeCCCcEEEEEcCCCceeEEEecCCC-----c
Q psy7108          22 VLKLPGVKKGDMAARVLKPEVLSG--HEGPVSCIEFSPVLSSTGM-VSASWDKTVKLWNAVETDTQHETIQLLS-----D   93 (703)
Q Consensus        22 ~i~~~~v~~~d~tg~~~~~~~l~g--H~~~V~~l~~sp~~dg~~L-~sgs~Dg~V~iWd~~~~~~~~~~~~~~~-----~   93 (703)
                      .+.+|+.+    +++++  ..+..  +...+.+++|+|  ||+++ ++++.++.|.+||+.+++.......+..     .
T Consensus        12 ~v~v~D~~----s~~~~--~~i~~~~~~~~~~~i~~sp--Dg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~   83 (337)
T d1pbyb_          12 KLVVIDTE----KMAVD--KVITIADAGPTPMVPMVAP--GGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKS   83 (337)
T ss_dssp             EEEEEETT----TTEEE--EEEECTTCTTCCCCEEECT--TSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEEC
T ss_pred             EEEEEECC----CCeEE--EEEECCCCCCCccEEEECC--CCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCcccccc
Confidence            34445444    67777  66654  445678999999  99987 5677899999999999876666554432     2


Q ss_pred             EEEEEEecCCCEEEEEEC------------CCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEE
Q psy7108          94 ALCVAYKPDGTEIVVATL------------DGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCY  161 (703)
Q Consensus        94 V~~v~~spdg~~las~s~------------dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~  161 (703)
                      +..++|+||++.++++..            +..+.+||..+++....+....                     .+..++|
T Consensus        84 ~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~---------------------~~~~~~~  142 (337)
T d1pbyb_          84 LFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPR---------------------QITMLAW  142 (337)
T ss_dssp             TTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCS---------------------SCCCEEE
T ss_pred             eeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEeccccC---------------------CceEEEE
Confidence            447899999999987764            5678999999999888877644                     4678899


Q ss_pred             cCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCc-------------------------------------------
Q psy7108         162 SADGSCILAAGQSKYICIYSSREGILLKKFTITQNKS-------------------------------------------  198 (703)
Q Consensus       162 spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~-------------------------------------------  198 (703)
                      +|||+++++++.  .+.+||..+++....+..+....                                           
T Consensus       143 s~dg~~l~~~~~--~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (337)
T d1pbyb_         143 ARDGSKLYGLGR--DLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTG  220 (337)
T ss_dssp             CTTSSCEEEESS--SEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEE
T ss_pred             cCCCCEEEEEcC--CcceeeeecCcEEEEeecCCccccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCcc
Confidence            999999998864  47789999887776654322100                                           


Q ss_pred             ---------------cccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCC
Q psy7108         199 ---------------LDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTG  263 (703)
Q Consensus       199 ---------------~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg  263 (703)
                                     ...+...+....+++++..++...        ..+++||+.+++.+..+. +...+.+++|+|||
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~i~v~d~~~~~~~~~~~-~~~~~~~~~~s~dG  291 (337)
T d1pbyb_         221 LLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAY--------NVLESFDLEKNASIKRVP-LPHSYYSVNVSTDG  291 (337)
T ss_dssp             EEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEEE--------SEEEEEETTTTEEEEEEE-CSSCCCEEEECTTS
T ss_pred             EEEEEcCCCcEEEEEecCCCcceEEEEecccceEEEEcc--------ccEEEEECCCCcEEEEEc-CCCCEEEEEECCCC
Confidence                           001112233345555665554432        379999999998877664 45678899999999


Q ss_pred             CEEEEEeCCC-EEEEEcCCCceeccee
Q psy7108         264 QAWVAATTEG-VHIYSLDSGYVFDPFL  289 (703)
Q Consensus       264 ~~l~s~s~Dg-v~iwd~~~~~~~~~~~  289 (703)
                      ++|++++.++ |.|||..+++.+..+.
T Consensus       292 ~~l~v~~~~~~i~v~D~~t~~~v~~i~  318 (337)
T d1pbyb_         292 STVWLGGALGDLAAYDAETLEKKGQVD  318 (337)
T ss_dssp             CEEEEESBSSEEEEEETTTCCEEEEEE
T ss_pred             CEEEEEeCCCcEEEEECCCCcEEEEEE
Confidence            9999999999 9999999988766543

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.70  E-value=3.9e-16  Score=167.83  Aligned_cols=206  Identities=9%  Similarity=-0.042  Sum_probs=153.2

Q ss_pred             CCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcE--EEEEeccccCCC
Q psy7108          60 SSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQ--VGSVEARRDLDS  137 (703)
Q Consensus        60 dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~--~~~~~~~~~~~~  137 (703)
                      +.-++++.+.||+|.|||..+++.+..+..+ ..+..++|||||+++++++.|+.|++||+.+++.  ...+....    
T Consensus        31 ~~~~~v~~~d~g~v~v~D~~t~~v~~~~~~g-~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~----  105 (432)
T d1qksa2          31 ENLFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS----  105 (432)
T ss_dssp             GGEEEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS----
T ss_pred             CcEEEEEEcCCCEEEEEECCCCcEEEEEeCC-CCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCC----
Confidence            4344688999999999999999777766555 5799999999999999999999999999988763  33333211    


Q ss_pred             CCCCCccchhhcccCCccEEEEEEcCCCCEE-EEEecCCcEEEEECCCCceEEEEEeccCCcc---ccccccceeeeecc
Q psy7108         138 GRLDTDLVTREQSLKAKAVSTVCYSADGSCI-LAAGQSKYICIYSSREGILLKKFTITQNKSL---DGINDFINRRKMTE  213 (703)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l-~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~sp  213 (703)
                                   .|.+.+.+.+|+|||++| ++++.+++|++||..+++++..+..+.....   .........+.++|
T Consensus       106 -------------~~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~  172 (432)
T d1qksa2         106 -------------EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASH  172 (432)
T ss_dssp             -------------EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECS
T ss_pred             -------------CCCCeEEecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECC
Confidence                         112246667788999986 5677899999999999999988875443211   11223556788999


Q ss_pred             CCCEEEEEcccCCCCCeeEEECCCCCCCccceeec-CCccceEEEEEcCCCCEEEEEeCCC--EEEEEcCCCceecce
Q psy7108         214 FGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL-KPEVRVFCVKFSPTGQAWVAATTEG--VHIYSLDSGYVFDPF  288 (703)
Q Consensus       214 dg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~-~h~~~V~~l~~spdg~~l~s~s~Dg--v~iwd~~~~~~~~~~  288 (703)
                      +|+.++++..+.     ..+.+||..+++...... .+...+.+++|+|||+++++++.++  +.+++..+++.....
T Consensus       173 dg~~~~vs~~~~-----~~i~~~d~~~~~~~~~~~i~~g~~~~~~~~spdg~~~~va~~~~~~v~v~d~~~~~~~~~~  245 (432)
T d1qksa2         173 YRPEFIVNVKET-----GKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIE  245 (432)
T ss_dssp             SSSEEEEEETTT-----TEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEE
T ss_pred             CCCEEEEEEccC-----CeEEEEEccCCCcceEEEEcccCccccceECCCCCEEEEeccccceEEEeecccceEEEEe
Confidence            999887766542     378889888776543322 3455688999999999998888776  889999887765443

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.68  E-value=9.9e-15  Score=146.93  Aligned_cols=237  Identities=13%  Similarity=0.174  Sum_probs=177.7

Q ss_pred             eecccCCceEEecC---Cceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEE-EEeCCCcEEEEEcCCCceeEEE
Q psy7108          13 RETHEGGNVVLKLP---GVKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMV-SASWDKTVKLWNAVETDTQHET   87 (703)
Q Consensus        13 ~~~~~~~~~~i~~~---~v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~-sgs~Dg~V~iWd~~~~~~~~~~   87 (703)
                      .+..+|....+...   .+.+|| .+++.+  +.+..|.. +..++|++  ++..++ ++..++.+.+|+..+++ ....
T Consensus        38 a~spdG~~l~v~~~~~~~i~v~d~~t~~~~--~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  111 (301)
T d1l0qa2          38 VISPDGTKVYVANAHSNDVSIIDTATNNVI--ATVPAGSS-PQGVAVSP--DGKQVYVTNMASSTLSVIDTTSNT-VAGT  111 (301)
T ss_dssp             EECTTSSEEEEEEGGGTEEEEEETTTTEEE--EEEECSSS-EEEEEECT--TSSEEEEEETTTTEEEEEETTTTE-EEEE
T ss_pred             EEeCCCCEEEEEECCCCEEEEEECCCCcee--eeeecccc-cccccccc--ccccccccccccceeeecccccce-eeee
Confidence            34445544434332   267777 467777  78877764 68899999  887655 55677889999998774 4445


Q ss_pred             ecCCCcEEEEEEecCCCEEEE-EECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCC
Q psy7108          88 IQLLSDALCVAYKPDGTEIVV-ATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGS  166 (703)
Q Consensus        88 ~~~~~~V~~v~~spdg~~las-~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~  166 (703)
                      ..+.....+++|+|+|..++. +..++.+.+|+..+++....+..+.                     .+..++++|+++
T Consensus       112 ~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~  170 (301)
T d1l0qa2         112 VKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR---------------------SPKGIAVTPDGT  170 (301)
T ss_dssp             EECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCS---------------------SEEEEEECTTSS
T ss_pred             ccccccceEEEeecCCCeeeeeeccccceeeeeccccceeeecccCC---------------------CceEEEeecccc
Confidence            556677899999999998755 4557889999999999888877654                     578899999999


Q ss_pred             EEEEEecC-CcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccce
Q psy7108         167 CILAAGQS-KYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAA  245 (703)
Q Consensus       167 ~l~s~s~d-g~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~  245 (703)
                      .+++++.+ +.+.+|+....+........         .....+++++++..++++..+..   ...|++||..+++...
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~g~~~~v~~~~~~---~~~v~v~D~~t~~~~~  238 (301)
T d1l0qa2         171 KVYVANFDSMSISVIDTVTNSVIDTVKVE---------AAPSGIAVNPEGTKAYVTNVDKY---FNTVSMIDTGTNKITA  238 (301)
T ss_dssp             EEEEEETTTTEEEEEETTTTEEEEEEECS---------SEEEEEEECTTSSEEEEEEECSS---CCEEEEEETTTTEEEE
T ss_pred             ceeeecccccccccccccceeeeeccccc---------CCcceeeccccccccccccccce---eeeeeeeecCCCeEEE
Confidence            98887765 56778888877666655422         24567899999998887665432   2479999999998877


Q ss_pred             eecCCccceEEEEEcCCCCEE-EEEeCCC-EEEEEcCCCceeccee
Q psy7108         246 RVLKPEVRVFCVKFSPTGQAW-VAATTEG-VHIYSLDSGYVFDPFL  289 (703)
Q Consensus       246 ~~~~h~~~V~~l~~spdg~~l-~s~s~Dg-v~iwd~~~~~~~~~~~  289 (703)
                      .+..+ ..+.+++|+|||++| ++++.++ |++||+.+++....+.
T Consensus       239 ~~~~~-~~~~~va~spdg~~l~va~~~~~~i~v~D~~t~~~~~~~~  283 (301)
T d1l0qa2         239 RIPVG-PDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMA  283 (301)
T ss_dssp             EEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred             EEcCC-CCEEEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEEEe
Confidence            66543 458999999999987 5677788 9999999998776543

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.68  E-value=2e-15  Score=154.57  Aligned_cols=223  Identities=12%  Similarity=0.133  Sum_probs=162.8

Q ss_pred             CEEEEEeCCCcEEEEEcCCCceeEEEec--CCCcEEEEEEecCCCEEE-EEECCCeEEEEEcCCCcEEEEEeccccCCCC
Q psy7108          62 TGMVSASWDKTVKLWNAVETDTQHETIQ--LLSDALCVAYKPDGTEIV-VATLDGQLIMFDVESAAQVGSVEARRDLDSG  138 (703)
Q Consensus        62 ~~L~sgs~Dg~V~iWd~~~~~~~~~~~~--~~~~V~~v~~spdg~~la-s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~  138 (703)
                      +++++++.|++|++||+++++.+..+..  +...+.+++|+|||++++ +++.++.|.+||+.+++.+..+..+...   
T Consensus         2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~---   78 (337)
T d1pbyb_           2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPE---   78 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTT---
T ss_pred             eEEEEEcCCCEEEEEECCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCc---
Confidence            5899999999999999999876665543  345578999999999875 5667899999999999998887765320   


Q ss_pred             CCCCccchhhcccCCccEEEEEEcCCCCEEEEEe------------cCCcEEEEECCCCceEEEEEeccCCccccccccc
Q psy7108         139 RLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG------------QSKYICIYSSREGILLKKFTITQNKSLDGINDFI  206 (703)
Q Consensus       139 ~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s------------~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v  206 (703)
                                  .+...+..++|+||++.+++++            .+..+.+||..+++....+....         .+
T Consensus        79 ------------~~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~---------~~  137 (337)
T d1pbyb_          79 ------------ERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPR---------QI  137 (337)
T ss_dssp             ------------EEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCS---------SC
T ss_pred             ------------ccccceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEeccccC---------Cc
Confidence                        0111345689999999998765            35679999999998888776332         46


Q ss_pred             eeeeeccCCCEEEEEcccCCCCCeeEEECCCCCC----------------------------------------------
Q psy7108         207 NRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKK----------------------------------------------  240 (703)
Q Consensus       207 ~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~----------------------------------------------  240 (703)
                      ..++++|+|+.+++++.+        +.+||..+                                              
T Consensus       138 ~~~~~s~dg~~l~~~~~~--------~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (337)
T d1pbyb_         138 TMLAWARDGSKLYGLGRD--------LHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDI  209 (337)
T ss_dssp             CCEEECTTSSCEEEESSS--------EEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTS
T ss_pred             eEEEEcCCCCEEEEEcCC--------cceeeeecCcEEEEeecCCccccceecCCcceeeccccccceeeeeeeeeeecc
Confidence            678999999998876543        22222222                                              


Q ss_pred             -------------------Cccce-eecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceeccee-----eeEEE
Q psy7108         241 -------------------GDMAA-RVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPFL-----LDISI  294 (703)
Q Consensus       241 -------------------~~~~~-~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~~-----~~~~~  294 (703)
                                         +.... ....+...+..++++|++.+++++  ++ +++||+.+++......     .+++|
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~~~~~~~~~~~~~~~~~~~  287 (337)
T d1pbyb_         210 DPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPHSYYSVNV  287 (337)
T ss_dssp             CTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEE
T ss_pred             ceeeecccCccEEEEEcCCCcEEEEEecCCCcceEEEEecccceEEEEc--cccEEEEECCCCcEEEEEcCCCCEEEEEE
Confidence                               11111 111233446667788888887655  35 9999999998865543     57999


Q ss_pred             ccchhhhHhhcCCcceEEEEEEecCch
Q psy7108         295 TPQSVKEALADKDYAKALMMSLKLNEQ  321 (703)
Q Consensus       295 spd~~~~~l~sg~~~~~l~la~~l~~~  321 (703)
                      +||+  ..+..++.++.+.+ |+....
T Consensus       288 s~dG--~~l~v~~~~~~i~v-~D~~t~  311 (337)
T d1pbyb_         288 STDG--STVWLGGALGDLAA-YDAETL  311 (337)
T ss_dssp             CTTS--CEEEEESBSSEEEE-EETTTC
T ss_pred             CCCC--CEEEEEeCCCcEEE-EECCCC
Confidence            9999  77778888899887 887654

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.64  E-value=2.3e-15  Score=154.70  Aligned_cols=251  Identities=10%  Similarity=0.063  Sum_probs=166.9

Q ss_pred             EEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEe-cCCCcEEEEEEecCCCEEEE-EECCCeEEEEEcCCCcEEEEEe
Q psy7108          53 IEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETI-QLLSDALCVAYKPDGTEIVV-ATLDGQLIMFDVESAAQVGSVE  130 (703)
Q Consensus        53 l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~-~~~~~V~~v~~spdg~~las-~s~dg~I~vwd~~~~~~~~~~~  130 (703)
                      ++|++  ++++|++++.|++|.+||+.+++...... .+...+.+++|+|||+++++ ++.++.|.+||+.+++.+..+.
T Consensus         2 ~a~~~--~~~~l~~~~~~~~v~v~D~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~   79 (346)
T d1jmxb_           2 PALKA--GHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHAN   79 (346)
T ss_dssp             CCCCT--TCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred             ccCCC--CCcEEEEEcCCCEEEEEECCCCCEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeec
Confidence            46888  99999999999999999999986655554 45667889999999998754 5578999999999999988776


Q ss_pred             ccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe------------cCCcEEEEECCCCceEEEEEeccCC-
Q psy7108         131 ARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG------------QSKYICIYSSREGILLKKFTITQNK-  197 (703)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s------------~dg~I~lwD~~~~~~~~~~~~~~~~-  197 (703)
                      .....              ..+...+..++|+|||+++++++            .++.+.+||..+++....+...... 
T Consensus        80 ~~~~~--------------~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  145 (346)
T d1jmxb_          80 LSSVP--------------GEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPR  145 (346)
T ss_dssp             SCCST--------------TEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCS
T ss_pred             ccccc--------------cccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeeeccC
Confidence            54320              00111345689999999988764            3677899998876543322111100 


Q ss_pred             --c-------------------cc----------cccccceeeeeccCCCEEEEEcccCC--------------------
Q psy7108         198 --S-------------------LD----------GINDFINRRKMTEFGNVSLIETRETH--------------------  226 (703)
Q Consensus       198 --~-------------------~~----------~~~~~v~~~~~spdg~~l~~~~~~~~--------------------  226 (703)
                        .                   .+          ........+.++|++..++.....+.                    
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (346)
T d1jmxb_         146 QVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPAT  225 (346)
T ss_dssp             SCCCEEECTTSCEEEESSSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CC
T ss_pred             ceEEEEecCCCEEEEeCCcceEEEccCCCEEEEEecCCCccceEEeccccEEEEEecCCCceEeeeeeeeeccCceeEee
Confidence              0                   00          00011223334444433222111100                    


Q ss_pred             CCCeeEEECCCCCCCcccee-ecCCccceEEEEEcCCCCEEEEEeCCCEEEEEcCCCceeccee-----eeEEEccchhh
Q psy7108         227 EGGNVVLKLPGVKKGDMAAR-VLKPEVRVFCVKFSPTGQAWVAATTEGVHIYSLDSGYVFDPFL-----LDISITPQSVK  300 (703)
Q Consensus       227 ~~~~~~i~iwd~~~~~~~~~-~~~h~~~V~~l~~spdg~~l~s~s~Dgv~iwd~~~~~~~~~~~-----~~~~~spd~~~  300 (703)
                      ......+.+||..++..... ...+...+..+.+++++..++....+.+.+||..+++.+..+.     .+++|+||+  
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~va~s~DG--  303 (346)
T d1jmxb_         226 ADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKG--  303 (346)
T ss_dssp             CEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEEESEEEEEETTTTEEEEEEECSSCCCEEEECSSS--
T ss_pred             ccCCceEEEEECCCCceEEEEeecccceeEEEEEeCCCCEEEEecCCeEEEEECCCCcEEEEEcCCCCEEEEEEcCCC--
Confidence            00113455566665543332 3346667888999999998888876669999999998765443     579999999  


Q ss_pred             hHhhcCCcceEEEEEEecCchh
Q psy7108         301 EALADKDYAKALMMSLKLNEQG  322 (703)
Q Consensus       301 ~~l~sg~~~~~l~la~~l~~~~  322 (703)
                      ..+..++.++.+.+ |+....+
T Consensus       304 ~~l~v~~~d~~v~v-~D~~t~~  324 (346)
T d1jmxb_         304 DKLYLGGTFNDLAV-FNPDTLE  324 (346)
T ss_dssp             SCEEEESBSSEEEE-EETTTTE
T ss_pred             CEEEEEeCCCcEEE-EECccCC
Confidence            77888888999888 8887543

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.62  E-value=3.8e-15  Score=152.99  Aligned_cols=243  Identities=10%  Similarity=0.006  Sum_probs=147.0

Q ss_pred             ceeec-cCCCcccccccc-CCCcCeEEEEEcCCCCCCEE-EEEeCCCcEEEEEcCCCceeEEEecCC------CcEEEEE
Q psy7108          28 VKKGD-MAARVLKPEVLS-GHEGPVSCIEFSPVLSSTGM-VSASWDKTVKLWNAVETDTQHETIQLL------SDALCVA   98 (703)
Q Consensus        28 v~~~d-~tg~~~~~~~l~-gH~~~V~~l~~sp~~dg~~L-~sgs~Dg~V~iWd~~~~~~~~~~~~~~------~~V~~v~   98 (703)
                      +.+|| .+++++  +++. .|...+.+++|+|  ||+++ ++++.++.|++||+.+++.........      ..+..++
T Consensus        20 v~v~D~~t~~~~--~t~~~~~~~~p~~l~~sp--DG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~~~~~~~~~~~~~~v~   95 (346)
T d1jmxb_          20 LHVVDVASDTVY--KSCVMPDKFGPGTAMMAP--DNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFA   95 (346)
T ss_dssp             EEEEETTTTEEE--EEEECSSCCSSCEEEECT--TSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEE
T ss_pred             EEEEECCCCCEE--EEEEcCCCCCcceEEECC--CCCEEEEEECCCCcEEEEeCccCeeeeeecccccccccCCceEEEE
Confidence            33444 378887  7776 4566788999999  99987 566688999999999886655444322      1345789


Q ss_pred             EecCCCEEEEEE------------CCCeEEEEEcCCCcEEEEEeccccCCCCC-----CCCccc---------h------
Q psy7108          99 YKPDGTEIVVAT------------LDGQLIMFDVESAAQVGSVEARRDLDSGR-----LDTDLV---------T------  146 (703)
Q Consensus        99 ~spdg~~las~s------------~dg~I~vwd~~~~~~~~~~~~~~~~~~~~-----~~~~~~---------~------  146 (703)
                      |+|||+++++++            .++.+.+||..+++....+..+.......     ......         .      
T Consensus        96 ~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (346)
T d1jmxb_          96 ISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKY  175 (346)
T ss_dssp             ECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEEESSSEEEECTTTCCE
T ss_pred             EecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeeeccCceEEEEecCCCEEEEeCCcceEEEccCCCE
Confidence            999999988765            36778889887765443332221100000     000000         0      


Q ss_pred             hhcccCCccEEEEEEcCCCCEEEE--------------------------EecCCcEEEEECCCCceEEEEEeccCCccc
Q psy7108         147 REQSLKAKAVSTVCYSADGSCILA--------------------------AGQSKYICIYSSREGILLKKFTITQNKSLD  200 (703)
Q Consensus       147 ~~~~~~~~~V~~i~~spdg~~l~s--------------------------~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~  200 (703)
                      ............+.++|++..+..                          +..+..+.+||..++........       
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  248 (346)
T d1jmxb_         176 TVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFA-------  248 (346)
T ss_dssp             EEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEE-------
T ss_pred             EEEEecCCCccceEEeccccEEEEEecCCCceEeeeeeeeeccCceeEeeccCCceEEEEECCCCceEEEEee-------
Confidence            000000111222233333322211                          11122344444444433222211       


Q ss_pred             cccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEc
Q psy7108         201 GINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSL  279 (703)
Q Consensus       201 ~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~  279 (703)
                      .+...+..+.+++++..++....+       .+.+||..+++.+.... +...+.+++|||||+++++++.|+ |+|||.
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~-------~v~v~d~~~~~~~~~~~-~~~~~~~va~s~DG~~l~v~~~d~~v~v~D~  320 (346)
T d1jmxb_         249 DLTELYFTGLRSPKDPNQIYGVLN-------RLAKYDLKQRKLIKAAN-LDHTYYCVAFDKKGDKLYLGGTFNDLAVFNP  320 (346)
T ss_dssp             ECSSCEEEEEECSSCTTEEEEEES-------EEEEEETTTTEEEEEEE-CSSCCCEEEECSSSSCEEEESBSSEEEEEET
T ss_pred             cccceeEEEEEeCCCCEEEEecCC-------eEEEEECCCCcEEEEEc-CCCCEEEEEEcCCCCEEEEEeCCCcEEEEEC
Confidence            122355667777777776665543       69999999998776654 345689999999999999999999 999999


Q ss_pred             CCCceeccee
Q psy7108         280 DSGYVFDPFL  289 (703)
Q Consensus       280 ~~~~~~~~~~  289 (703)
                      .+++.+..+.
T Consensus       321 ~t~~~i~~i~  330 (346)
T d1jmxb_         321 DTLEKVKNIK  330 (346)
T ss_dssp             TTTEEEEEEE
T ss_pred             ccCCEEEEEE
Confidence            9998876554

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.62  E-value=6.6e-14  Score=143.12  Aligned_cols=278  Identities=10%  Similarity=0.087  Sum_probs=175.4

Q ss_pred             EEeeecccCCceEEecCCceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEE-eCCCcEEEEEcCCCceeEEE-
Q psy7108          10 IETRETHEGGNVVLKLPGVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSA-SWDKTVKLWNAVETDTQHET-   87 (703)
Q Consensus        10 ~~~~~~~~~~~~~i~~~~v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sg-s~Dg~V~iWd~~~~~~~~~~-   87 (703)
                      .+.++..+..+..|++|++.   .++.+. ......|.+.+.+++|+|  ||++|+++ ..|+.|++|++......... 
T Consensus         3 ~~~v~v~~~~~~~I~v~~~~---~~~~l~-~~~~~~~~~~v~~la~sp--DG~~L~v~~~~d~~i~~~~i~~~~~~~~~~   76 (333)
T d1ri6a_           3 KQTVYIASPESQQIHVWNLN---HEGALT-LTQVVDVPGQVQPMVVSP--DKRYLYVGVRPEFRVLAYRIAPDDGALTFA   76 (333)
T ss_dssp             EEEEEEEEGGGTEEEEEEEC---TTSCEE-EEEEEECSSCCCCEEECT--TSSEEEEEETTTTEEEEEEECTTTCCEEEE
T ss_pred             ceEEEEECCCCCcEEEEEEc---CCCCeE-EEEEEcCCCCEeEEEEeC--CCCEEEEEECCCCeEEEEEEeCCCCcEEEe
Confidence            34455555566667777554   123221 022336889999999999  99988555 56899999999765433322 


Q ss_pred             --ecCCCcEEEEEEecCCCEEEEEEC-CCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC
Q psy7108          88 --IQLLSDALCVAYKPDGTEIVVATL-DGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD  164 (703)
Q Consensus        88 --~~~~~~V~~v~~spdg~~las~s~-dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd  164 (703)
                        ..+...+..++|+|||++|++++. ++.|.+|+..............                  +...+.++.++||
T Consensus        77 ~~~~~~~~p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~------------------~~~~~~~v~~s~d  138 (333)
T d1ri6a_          77 AESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVE------------------GLDGCHSANISPD  138 (333)
T ss_dssp             EEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEEC------------------CCTTBCCCEECTT
T ss_pred             eecccCCCceEEEEcCCCCEEeecccCCCceeeeccccccceecccccC------------------CCccceEEEeeec
Confidence              335566788999999999998875 6789999988776554433221                  1225678899999


Q ss_pred             CCEEEEEec-CCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcc
Q psy7108         165 GSCILAAGQ-SKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDM  243 (703)
Q Consensus       165 g~~l~s~s~-dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~  243 (703)
                      ++++++++. +..|.+|+..................  .......++|++++...+......   +...+..++......
T Consensus       139 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~--~g~~p~~i~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~  213 (333)
T d1ri6a_         139 NRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTV--EGAGPRHMVFHPNEQYAYCVNELN---SSVDVWELKDPHGNI  213 (333)
T ss_dssp             SSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECS--TTCCEEEEEECTTSSEEEEEETTT---TEEEEEESSCTTSCC
T ss_pred             ceeeeccccccceeeEEEeccCCcceeeeceeeeee--cCCCccEEEEeccceeEEeecccc---CceEEEeecccccce
Confidence            999888764 45699999877544332221111111  123457799999999887765432   112344443333221


Q ss_pred             c--eee------cCCccceEEEEEcCCCCEEEEEeC-CC-EEEEEcCCCceecce---------eeeEEEccchhhhH-h
Q psy7108         244 A--ARV------LKPEVRVFCVKFSPTGQAWVAATT-EG-VHIYSLDSGYVFDPF---------LLDISITPQSVKEA-L  303 (703)
Q Consensus       244 ~--~~~------~~h~~~V~~l~~spdg~~l~s~s~-Dg-v~iwd~~~~~~~~~~---------~~~~~~spd~~~~~-l  303 (703)
                      .  ...      .........+++++|+++++.+.. ++ +.+|++.........         ...++|+|||  +. +
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~spDG--k~l~  291 (333)
T d1ri6a_         214 ECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSG--KYLI  291 (333)
T ss_dssp             EEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTS--SEEE
T ss_pred             eeeeeeeeeecCCCccccceeEEEecccCceeeecccCCeEEEEEEcCCCCEEEEEEEeCCCCCeeEEEEeCCC--CEEE
Confidence            1  111      112345677899999998765554 45 889988755432111         2468999999  54 4


Q ss_pred             hcCCcceEEEEEEecC
Q psy7108         304 ADKDYAKALMMSLKLN  319 (703)
Q Consensus       304 ~sg~~~~~l~la~~l~  319 (703)
                      .++..++.+.+ |+++
T Consensus       292 va~~~~~~v~v-~~id  306 (333)
T d1ri6a_         292 AAGQKSHHISV-YEIV  306 (333)
T ss_dssp             EECTTTCEEEE-EEEE
T ss_pred             EEECCCCeEEE-EEEE
Confidence            55666677776 6554

>d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Gastric lipase
domain: Gastric lipase
species: Dog (Canis familiaris) [TaxId: 9615]

Probab=99.52  E-value=7.7e-17  Score=168.91  Aligned_cols=175  Identities=22%  Similarity=0.234  Sum_probs=137.3

Q ss_pred             cCCccceeeeecccchhhhhhhhcCCcccccccccccCCCCCCcCCCcccceeecccCcCCCCCCccccccCchhhhhcc
Q psy7108         448 SEQNKFYRFSCDFNVYTLELISRLGPLRIKPKVEKMETGSSDEESSKDDETEIRVLDEDVPRSSDTGDIQLKSTRMNELG  527 (703)
Q Consensus       448 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  527 (703)
                      ++...||+|+.|.|.++|+||++|...||+.+..                              .......||||++-||
T Consensus        17 ~~~~~~~~y~~e~h~v~t~DG~~l~~~ri~~~~~------------------------------~~~~~~~~~~vlllHG   66 (377)
T d1k8qa_          17 SQMITYWGYPAEEYEVVTEDGYILGIDRIPYGRK------------------------------NSENIGRRPVAFLQHG   66 (377)
T ss_dssp             HHHHHHTTCCCEEEEEECTTSEEEEEEEECSCSS------------------------------CCTTTTTCCEEEEECC
T ss_pred             HHHHHHcCCCceEEEEEcCCCCEEEEEEecCCCC------------------------------CCccCCCCCeEEEECC
Confidence            5667899999999999999999999999974322                              1123446899999999


Q ss_pred             cCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhhhcccccchhhhcccccceeeeeee
Q psy7108         528 LYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLGNLVTKDMLEGLYGIYALNIFQ  607 (703)
Q Consensus       528 ~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~s~~e  607 (703)
                      +...+.  .|..+.+..+.+.++.  ..|+.||+...|+...+.+.......                 ..+++.+++++
T Consensus        67 ~~~~~~--~~~~~~~~~sla~~L~--~~Gy~V~~~D~rG~G~S~~~~~~~~~-----------------~~~~~~~~~~~  125 (377)
T d1k8qa_          67 LLASAT--NWISNLPNNSLAFILA--DAGYDVWLGNSRGNTWARRNLYYSPD-----------------SVEFWAFSFDE  125 (377)
T ss_dssp             TTCCGG--GGSSSCTTTCHHHHHH--HTTCEEEECCCTTSTTSCEESSSCTT-----------------STTTTCCCHHH
T ss_pred             Cccchh--HHhhcCccchHHHHHH--HCCCEEEEEcCCCCCCCCCCCCCCCc-----------------chhhccCCHHH
Confidence            999977  8888877666666666  67888999888875554422111111                 12677888999


Q ss_pred             eeecchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccccCCCCCh
Q psy7108         608 VGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLGNLVTR  673 (703)
Q Consensus       608 ~~~~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~~~~~~~  673 (703)
                      ++.+|+++.|++|++.++.++++++|||+|+++++.++..+|+..+++..+...+|.........+
T Consensus       126 ~~~~Dl~~~i~~i~~~~g~~~v~lvGhS~GG~ia~~~a~~~p~~~~~l~~~~~~~~~~~~~~~~~~  191 (377)
T d1k8qa_         126 MAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAPVATVKYTETL  191 (377)
T ss_dssp             HHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEESCCSCCSSCCSG
T ss_pred             HhhhhHHHHHHHHHHHcCCCCEEEEEecchHHHHHHHHHhhhhhhhhceeEeeccccccccchhhH
Confidence            999999999999999999999999999999999999999999887777777777777665554443

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.50  E-value=2.6e-12  Score=133.65  Aligned_cols=228  Identities=10%  Similarity=0.013  Sum_probs=152.0

Q ss_pred             eec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEe----------CCCcEEEEEcCCCceeEEEecCCCcE----
Q psy7108          30 KGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSAS----------WDKTVKLWNAVETDTQHETIQLLSDA----   94 (703)
Q Consensus        30 ~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs----------~Dg~V~iWd~~~~~~~~~~~~~~~~V----   94 (703)
                      ++| .+++.+  .++.++..+  .++|+|  ||++|++++          .++.|++||..+++.......+....    
T Consensus        51 v~D~~tg~~~--~~~~~~~~~--~~a~Sp--DG~~l~va~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~  124 (373)
T d2madh_          51 VLDAGSGSIL--GHVNGGFLP--NPVAAH--SGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVG  124 (373)
T ss_pred             EEECCCCCEE--EEEeCCCCc--cEEEcC--CCCEEEEEeecCCcccccccceEEEEEECCCCcEEEEEecCCcceeEec
Confidence            445 588888  788777654  799999  999999875          45789999999987666655444332    


Q ss_pred             ---EEEEEecCCCEEEEEE--CCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEE-
Q psy7108          95 ---LCVAYKPDGTEIVVAT--LDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCI-  168 (703)
Q Consensus        95 ---~~v~~spdg~~las~s--~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l-  168 (703)
                         ..+.|+++++.+++..  .++.+.+|+..+.+......                        ...++.++|+|+.+ 
T Consensus       125 ~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~s~~g~~~~  180 (373)
T d2madh_         125 PYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSDDQLLS------------------------SPTCYHIHPGAPSTF  180 (373)
T ss_pred             cCCCcEEEEeCCCcEEEEEEcCCCceEEeeccCCeEEEEec------------------------cceeEEEecCCCcEE
Confidence               4578999998776654  35678899988776654433                        24567788887654 


Q ss_pred             EEEecCCcEEEEECCCCceEEEEEeccCC-----------------------------------------cccc------
Q psy7108         169 LAAGQSKYICIYSSREGILLKKFTITQNK-----------------------------------------SLDG------  201 (703)
Q Consensus       169 ~s~s~dg~I~lwD~~~~~~~~~~~~~~~~-----------------------------------------~~~~------  201 (703)
                      ++.+.|+.+.+||...+............                                         ....      
T Consensus       181 v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~  260 (373)
T d2madh_         181 YLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRK  260 (373)
T ss_pred             EEEcCCCeEEEEEcCCceeeEEEeeeccccCccceeeeEEECCCceEEEecCCceEEEEEcCCCeEEEEEeeccccCcEE
Confidence            46677888888887765544332211000                                         0000      


Q ss_pred             ----ccccceeeeeccCCCEEEEEcccCC----CCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCE--EEEEeC
Q psy7108         202 ----INDFINRRKMTEFGNVSLIETRETH----EGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQA--WVAATT  271 (703)
Q Consensus       202 ----~~~~v~~~~~spdg~~l~~~~~~~~----~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~--l~s~s~  271 (703)
                          .......+++++++..++.....+.    ......+.+||..+++.+..+. +...+.+++|+|||+.  +++++.
T Consensus       261 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~~-~~~~~~~~a~spDG~~~l~vt~~~  339 (373)
T d2madh_         261 ADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS-LGHDVDAISVAQDGGPDLYALSAG  339 (373)
T ss_pred             eeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEEECCCCcEEEEec-CCCCeeEEEECCCCCEEEEEEeCC
Confidence                0011233466667766554433221    0112478899999998776554 5567899999999985  367888


Q ss_pred             CC-EEEEEcCCCceecce
Q psy7108         272 EG-VHIYSLDSGYVFDPF  288 (703)
Q Consensus       272 Dg-v~iwd~~~~~~~~~~  288 (703)
                      |+ |+|||+.+++....+
T Consensus       340 d~~v~v~D~~tg~~~~~~  357 (373)
T d2madh_         340 TEVLHIYDAGAGDQDQST  357 (373)
T ss_pred             CCeEEEEECCCCCEEEEE
Confidence            88 999999999886554

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.50  E-value=5.9e-13  Score=137.45  Aligned_cols=252  Identities=11%  Similarity=0.040  Sum_probs=166.0

Q ss_pred             eec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEE----------eCCCcEEEEEcCCCceeEEEecCC-------
Q psy7108          30 KGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSA----------SWDKTVKLWNAVETDTQHETIQLL-------   91 (703)
Q Consensus        30 ~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sg----------s~Dg~V~iWd~~~~~~~~~~~~~~-------   91 (703)
                      +|| .+|+++  .++..+..+  .++|+|  ||++|+.+          +.|+.|++||..+++....+..+.       
T Consensus        32 v~D~~tg~~~--~~~~~g~~~--~~a~Sp--Dg~~l~v~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~~~~~~~~~~~~~  105 (355)
T d2bbkh_          32 VIDGEAGRVI--GMIDGGFLP--NPVVAD--DGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVG  105 (355)
T ss_dssp             EEETTTTEEE--EEEEECSSC--EEEECT--TSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBS
T ss_pred             EEECCCCcEE--EEEECCCCC--ceEEcC--CCCEEEEEeCCCccccccCCCCEEEEEECCCCCEEEEEecCCcceeecC
Confidence            455 478887  777766554  799999  99988764          347899999999987665554332       


Q ss_pred             CcEEEEEEecCCCEEEEEE--CCCeEEEEEcCCCcEEEEEeccccCCC--------------CC-------CCCccc---
Q psy7108          92 SDALCVAYKPDGTEIVVAT--LDGQLIMFDVESAAQVGSVEARRDLDS--------------GR-------LDTDLV---  145 (703)
Q Consensus        92 ~~V~~v~~spdg~~las~s--~dg~I~vwd~~~~~~~~~~~~~~~~~~--------------~~-------~~~~~~---  145 (703)
                      .....++|+|+|+.++++.  .+..+.+||..+++.+..+........              +.       ......   
T Consensus       106 ~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~v~~~~~~~~~~~~  185 (355)
T d2bbkh_         106 TYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITH  185 (355)
T ss_dssp             CCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEE
T ss_pred             CCCceEEEecCCCeeEEecCCCCceeeeeecCCCcEeeEEecCCcceEeecCCcceEEEcCCCCEEEEEecCCCeEEEEe
Confidence            2235689999999888775  456899999999988776654321000              00       000000   


Q ss_pred             -hhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEE--EEeccCC--ccccccccceeeeeccCCCEEEE
Q psy7108         146 -TREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKK--FTITQNK--SLDGINDFINRRKMTEFGNVSLI  220 (703)
Q Consensus       146 -~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~--~~~~~~~--~~~~~~~~v~~~~~spdg~~l~~  220 (703)
                       ......+...+....+.+++..++.++.++.+++|++..++....  ...+...  ...........+++++++..+++
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~  265 (355)
T d2bbkh_         186 TEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYL  265 (355)
T ss_dssp             CCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEE
T ss_pred             cccccceecceeeeccccCCCCeEEEecCCCeEEEEecCCCcEEEEeccCCcccceEeeeeeccceEEEEEeCCCCeEEE
Confidence             000112223345567788888899999999999999988754321  1111100  00011123345889999998887


Q ss_pred             EcccCC----CCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCE--EEEEeCCC-EEEEEcCCCceecce
Q psy7108         221 ETRETH----EGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQA--WVAATTEG-VHIYSLDSGYVFDPF  288 (703)
Q Consensus       221 ~~~~~~----~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~--l~s~s~Dg-v~iwd~~~~~~~~~~  288 (703)
                      ....+.    ......+.+||..+++.+..+. +...+.+++|+|||+.  +++++.|+ |.|||..+++.+..+
T Consensus       266 ~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~-~~~~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~~~~~i  339 (355)
T d2bbkh_         266 LVDQRDEWRHKTASRFVVVLDAKTGERLAKFE-MGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSV  339 (355)
T ss_dssp             EEEECCTTCTTSCEEEEEEEETTTCCEEEEEE-EEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred             EeccCCceeecCCCCeEEEEeCCCCcEEEEec-CCCCEEEEEEcCCCCeEEEEEECCCCEEEEEECCCCCEEEEE
Confidence            654432    1233689999999998776654 3456889999999984  45667788 999999999876544

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.44  E-value=3.5e-12  Score=129.98  Aligned_cols=191  Identities=9%  Similarity=0.128  Sum_probs=134.2

Q ss_pred             EEEEEeCCCcEEEEEcCCCc--eeEEEecCCCcEEEEEEecCCCEEEEEE-CCCeEEEEEcCCCcEEEEEeccccCCCCC
Q psy7108          63 GMVSASWDKTVKLWNAVETD--TQHETIQLLSDALCVAYKPDGTEIVVAT-LDGQLIMFDVESAAQVGSVEARRDLDSGR  139 (703)
Q Consensus        63 ~L~sgs~Dg~V~iWd~~~~~--~~~~~~~~~~~V~~v~~spdg~~las~s-~dg~I~vwd~~~~~~~~~~~~~~~~~~~~  139 (703)
                      .+++++.|++|++|++....  ...+...+.+.+.+++|+|||++|++++ .|+.|++|++........+..+..     
T Consensus         6 v~v~~~~~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~-----   80 (333)
T d1ri6a_           6 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESA-----   80 (333)
T ss_dssp             EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEE-----
T ss_pred             EEEECCCCCcEEEEEEcCCCCeEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecc-----
Confidence            45788899999999997554  3345567889999999999999986655 489999999987654333332221     


Q ss_pred             CCCccchhhcccCCccEEEEEEcCCCCEEEEEec-CCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEE
Q psy7108         140 LDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ-SKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVS  218 (703)
Q Consensus       140 ~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~-dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l  218 (703)
                                  ....+..++|+|||++|++++. ++.+.+|+..............      +...+.++.++|+++.+
T Consensus        81 ------------~~~~p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~------~~~~~~~v~~s~d~~~~  142 (333)
T d1ri6a_          81 ------------LPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVE------GLDGCHSANISPDNRTL  142 (333)
T ss_dssp             ------------CSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEEC------CCTTBCCCEECTTSSEE
T ss_pred             ------------cCCCceEEEEcCCCCEEeecccCCCceeeeccccccceecccccC------CCccceEEEeeecceee
Confidence                        1124567999999999999875 6689999988776554443222      22356788999999988


Q ss_pred             EEEcccCCCCCeeEEECCCCCCCcccee------ecCCccceEEEEEcCCCCEEEEEeCCC--EEEEEcCC
Q psy7108         219 LIETRETHEGGNVVLKLPGVKKGDMAAR------VLKPEVRVFCVKFSPTGQAWVAATTEG--VHIYSLDS  281 (703)
Q Consensus       219 ~~~~~~~~~~~~~~i~iwd~~~~~~~~~------~~~h~~~V~~l~~spdg~~l~s~s~Dg--v~iwd~~~  281 (703)
                      +.....+     ..+.+|+.........      ..........++|++++..++......  ..+|+...
T Consensus       143 ~~~~~~~-----~~i~~~~~~~~~~~~~~~~~~~~~~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~~  208 (333)
T d1ri6a_         143 WVPALKQ-----DRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKD  208 (333)
T ss_dssp             EEEEGGG-----TEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSC
T ss_pred             ecccccc-----ceeeEEEeccCCcceeeeceeeeeecCCCccEEEEeccceeEEeeccccCceEEEeecc
Confidence            8776543     3677887665432211      122345568899999999987665544  77887654

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.40  E-value=4e-12  Score=130.99  Aligned_cols=252  Identities=11%  Similarity=0.002  Sum_probs=161.8

Q ss_pred             CeEEEEEcCCCCCCEEEEEe-----CCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEE----------CCC
Q psy7108          49 PVSCIEFSPVLSSTGMVSAS-----WDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVAT----------LDG  113 (703)
Q Consensus        49 ~V~~l~~sp~~dg~~L~sgs-----~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s----------~dg  113 (703)
                      |+.-.+.+|  |+..++...     .+++|.+||..+++.+..+..+..  ..++|||||+.|++++          .|+
T Consensus         3 p~~~~a~sp--dg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~~~~~g~~--~~~a~SpDg~~l~v~~~~~~~~~~g~~d~   78 (355)
T d2bbkh_           3 PRILEAPAP--DARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFL--PNPVVADDGSFIAHASTVFSRIARGERTD   78 (355)
T ss_dssp             CCBCCCCCC--CTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSS--CEEEECTTSSCEEEEEEEEEETTEEEEEE
T ss_pred             CcEeEeeCC--CCCEEEEEecccCCCcCeEEEEECCCCcEEEEEECCCC--CceEEcCCCCEEEEEeCCCccccccCCCC
Confidence            333445688  999887653     456799999999876665554433  3799999999887653          478


Q ss_pred             eEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe--cCCcEEEEECCCCceEEEE
Q psy7108         114 QLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG--QSKYICIYSSREGILLKKF  191 (703)
Q Consensus       114 ~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s--~dg~I~lwD~~~~~~~~~~  191 (703)
                      .|++||+.+++.+..+..+.....             ........++|+|+++.+++++  .+..+.+||..+++.+..+
T Consensus        79 ~v~v~D~~t~~~~~~~~~~~~~~~-------------~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~  145 (355)
T d2bbkh_          79 YVEVFDPVTLLPTADIELPDAPRF-------------LVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRML  145 (355)
T ss_dssp             EEEEECTTTCCEEEEEEETTCCCC-------------CBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEE
T ss_pred             EEEEEECCCCCEEEEEecCCccee-------------ecCCCCceEEEecCCCeeEEecCCCCceeeeeecCCCcEeeEE
Confidence            999999999999888765432100             0011234578999999988764  4567999999998877765


Q ss_pred             EeccCCcc-------------------------------------ccccccceeeeeccCCCEEEEEcccCCCCCeeEEE
Q psy7108         192 TITQNKSL-------------------------------------DGINDFINRRKMTEFGNVSLIETRETHEGGNVVLK  234 (703)
Q Consensus       192 ~~~~~~~~-------------------------------------~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~  234 (703)
                      ..+.....                                     ......+....+++++..++..+.+      ..++
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~  219 (355)
T d2bbkh_         146 DVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYT------GKIH  219 (355)
T ss_dssp             ECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTT------SEEE
T ss_pred             ecCCcceEeecCCcceEEEcCCCCEEEEEecCCCeEEEEecccccceecceeeeccccCCCCeEEEecCC------CeEE
Confidence            53221000                                     0011112233444444444444332      3677


Q ss_pred             CCCCCCCccce--eecCC----------ccceEEEEEcCCCCEEEEEeCC----------C-EEEEEcCCCceeccee--
Q psy7108         235 LPGVKKGDMAA--RVLKP----------EVRVFCVKFSPTGQAWVAATTE----------G-VHIYSLDSGYVFDPFL--  289 (703)
Q Consensus       235 iwd~~~~~~~~--~~~~h----------~~~V~~l~~spdg~~l~s~s~D----------g-v~iwd~~~~~~~~~~~--  289 (703)
                      +|+...++...  ....+          ......++++|++..++....+          . |.+||..+++....+.  
T Consensus       220 v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~~~  299 (355)
T d2bbkh_         220 QIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG  299 (355)
T ss_dssp             EEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE
T ss_pred             EEecCCCcEEEEeccCCcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCCCcEEEEecCC
Confidence            88776654321  11111          1123458899999988655422          2 8899999988765443  


Q ss_pred             ---eeEEEccchhhhHhhcCCcceEEEEEEecCchhHH
Q psy7108         290 ---LDISITPQSVKEALADKDYAKALMMSLKLNEQGLI  324 (703)
Q Consensus       290 ---~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~~~~  324 (703)
                         ..++|+||+...+++++..++.+.+ |++...+.+
T Consensus       300 ~~~~~~a~spDG~~~l~v~~~~d~~i~v-~D~~tg~~~  336 (355)
T d2bbkh_         300 HEIDSINVSQDEKPLLYALSTGDKTLYI-HDAESGEEL  336 (355)
T ss_dssp             EEECEEEECCSSSCEEEEEETTTTEEEE-EETTTCCEE
T ss_pred             CCEEEEEEcCCCCeEEEEEECCCCEEEE-EECCCCCEE
Confidence               5799999994446677888899988 888766443

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.37  E-value=3.5e-11  Score=124.86  Aligned_cols=247  Identities=9%  Similarity=-0.065  Sum_probs=163.3

Q ss_pred             ccCCCcCeEEEEEcCCCCCCEEEEE-----eCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEEC------
Q psy7108          43 LSGHEGPVSCIEFSPVLSSTGMVSA-----SWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATL------  111 (703)
Q Consensus        43 l~gH~~~V~~l~~sp~~dg~~L~sg-----s~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~------  111 (703)
                      ...+.+++.+++++|  ||+.++..     +.++.|.+||..+++.+..+..+..  ..++|+|||++|++++.      
T Consensus        16 ~~~~~~p~~~~a~sp--dg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~~~~--~~~a~SpDG~~l~va~~~~~~~~   91 (373)
T d2madh_          16 AGAADGPTNDEAPGA--DGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFL--PNPVAAHSGSEFALASTSFSRIA   91 (373)
T ss_pred             cccCCCCccccccCC--CCCEEEEEcccccCCCceEEEEECCCCCEEEEEeCCCC--ccEEEcCCCCEEEEEeecCCccc
Confidence            346889999999999  99988764     2345789999989876665544433  37999999999988754      


Q ss_pred             ----CCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe--cCCcEEEEECCCC
Q psy7108         112 ----DGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG--QSKYICIYSSREG  185 (703)
Q Consensus       112 ----dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s--~dg~I~lwD~~~~  185 (703)
                          ++.|.+||..+++.+..+..+......             -......+.|+++++.+++..  .++.+.+|+....
T Consensus        92 ~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~-------------~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~  158 (373)
T d2madh_          92 KGKRTDYVEVFDPVTFLPIADIELPDAPRFD-------------VGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGS  158 (373)
T ss_pred             ccccceEEEEEECCCCcEEEEEecCCcceeE-------------eccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccCC
Confidence                578999999999998887665431000             000124578999999877654  4567899998887


Q ss_pred             ceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeec-----------------
Q psy7108         186 ILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL-----------------  248 (703)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~-----------------  248 (703)
                      +......            ...++.++|+|+.++++...+     ..+.+||...++......                 
T Consensus       159 ~~~~~~~------------~~~~~~~s~~g~~~~v~~~~d-----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (373)
T d2madh_         159 SDDQLLS------------SPTCYHIHPGAPSTFYLLCAQ-----GGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQA  221 (373)
T ss_pred             eEEEEec------------cceeEEEecCCCcEEEEEcCC-----CeEEEEEcCCceeeEEEeeeccccCccceeeeEEE
Confidence            6654443            345678889988766554432     257777765543221110                 


Q ss_pred             ---------CCcc---------------------------------ceEEEEEcCCCCEEEE----------EeCCC-EE
Q psy7108         249 ---------KPEV---------------------------------RVFCVKFSPTGQAWVA----------ATTEG-VH  275 (703)
Q Consensus       249 ---------~h~~---------------------------------~V~~l~~spdg~~l~s----------~s~Dg-v~  275 (703)
                               ....                                 ....++++|++..++.          ...++ +.
T Consensus       222 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~  301 (373)
T d2madh_         222 NKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVT  301 (373)
T ss_pred             CCCceEEEecCCceEEEEEcCCCeEEEEEeeccccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEE
Confidence                     0000                                 0112355555554432          23344 77


Q ss_pred             EEEcCCCceecce-----eeeEEEccchhhhHhhcCCcceEEEEEEecCchhHH
Q psy7108         276 IYSLDSGYVFDPF-----LLDISITPQSVKEALADKDYAKALMMSLKLNEQGLI  324 (703)
Q Consensus       276 iwd~~~~~~~~~~-----~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~~~~  324 (703)
                      +||..+++....+     ...++|+||+...++++++.++++.+ |++...+.+
T Consensus       302 ~~d~~t~~~~~~~~~~~~~~~~a~spDG~~~l~vt~~~d~~v~v-~D~~tg~~~  354 (373)
T d2madh_         302 SVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHI-YDAGAGDQD  354 (373)
T ss_pred             EEECCCCcEEEEecCCCCeeEEEECCCCCEEEEEEeCCCCeEEE-EECCCCCEE
Confidence            8888888765443     35689999994446678889999998 988766543

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.30  E-value=4.2e-11  Score=124.68  Aligned_cols=248  Identities=10%  Similarity=-0.059  Sum_probs=155.6

Q ss_pred             cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEe----------CCCcEEEEEcCCCceeEEEecCCC-------cEE
Q psy7108          33 MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSAS----------WDKTVKLWNAVETDTQHETIQLLS-------DAL   95 (703)
Q Consensus        33 ~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs----------~Dg~V~iWd~~~~~~~~~~~~~~~-------~V~   95 (703)
                      .+++++  .++.++..+  .++|+|  ||+.|++++          .|++|++||..+++....+..+..       ...
T Consensus        54 ~~~~~~--~~~~~~~~~--~~a~sp--Dg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~  127 (368)
T d1mdah_          54 GCGVTL--GHSLGAFLS--LAVAGH--SGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVH  127 (368)
T ss_dssp             TTTEEE--EEEEECTTC--EEEECT--TSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTT
T ss_pred             CCCcEE--EEEeCCCCC--cceECC--CCCEEEEEcccCccccccccCCeEEEEECCCCcEeeeecCCccceecccCCcc
Confidence            467777  777776655  589999  999888764          367899999999876665543221       234


Q ss_pred             EEEEecCCCEEEEEE-CCCeEEEEEcCCCcEEEEEeccccCCCC----------CCCCccc---------------hhhc
Q psy7108          96 CVAYKPDGTEIVVAT-LDGQLIMFDVESAAQVGSVEARRDLDSG----------RLDTDLV---------------TREQ  149 (703)
Q Consensus        96 ~v~~spdg~~las~s-~dg~I~vwd~~~~~~~~~~~~~~~~~~~----------~~~~~~~---------------~~~~  149 (703)
                      .++|+|||++++++. .++.+.+||+.+++....+..+......          .......               ....
T Consensus       128 ~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~  207 (368)
T d1mdah_         128 IIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCT  207 (368)
T ss_dssp             SEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSC
T ss_pred             ceEECCCCCEEEEEeCCCCeEEEEECCCCcEeEEeeccCcceEccCCCceEEEEcCCCCEEEEEecCCceeeeeeecccc
Confidence            689999999998876 5789999999999988877654321100          0000000               0001


Q ss_pred             ccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCc----cccccccceeeeeccCCCEEEEEcccC
Q psy7108         150 SLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKS----LDGINDFINRRKMTEFGNVSLIETRET  225 (703)
Q Consensus       150 ~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~----~~~~~~~v~~~~~spdg~~l~~~~~~~  225 (703)
                      ..+...+....+.+++..+.+.  ++.+.+++...+.............    ..........+++++++..+++....+
T Consensus       208 ~~~~~~~~~~~~~~~g~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~  285 (368)
T d1mdah_         208 GAQNCSSQAAQANYPGMLVWAV--ASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEH  285 (368)
T ss_dssp             TTSCBCSCCEEETTTTEEEECB--SSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEEC
T ss_pred             cccccceeecccccCcEEEEec--CCCEEEEeecCCceEEEeecccccceeeeeeecCCCceeEEEcCCCCEEEEEecCC
Confidence            1122233455666666554433  4556777766554433221111000    000111234578999998877765433


Q ss_pred             C---CCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCE-E-EEEeCCC-EEEEEcCCCceeccee
Q psy7108         226 H---EGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQA-W-VAATTEG-VHIYSLDSGYVFDPFL  289 (703)
Q Consensus       226 ~---~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~-l-~s~s~Dg-v~iwd~~~~~~~~~~~  289 (703)
                      .   ......+.+||..+++.+..+. +...+.+++|+|||+. + +++..++ |.+||..+++....+.
T Consensus       286 ~~~~~~~~~~v~v~D~~t~~~~~~~~-~~~~~~~~a~spDG~~~ly~s~~~~~~v~v~D~~tgk~~~~i~  354 (368)
T d1mdah_         286 SRSCLAAAENTSSVTASVGQTSGPIS-NGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVE  354 (368)
T ss_dssp             SSCTTSCEEEEEEEESSSCCEEECCE-EEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECC
T ss_pred             CceeecCCceEEEEECCCCcEeEEec-CCCceeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEEE
Confidence            1   1223578999999998776554 3456889999999974 3 5666777 9999999998876554

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.08  E-value=1.6e-09  Score=112.36  Aligned_cols=259  Identities=10%  Similarity=-0.012  Sum_probs=157.3

Q ss_pred             CCCcCeEEEEEcCCCCCCEE--E-EEeCCCc--EEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEE---------
Q psy7108          45 GHEGPVSCIEFSPVLSSTGM--V-SASWDKT--VKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVAT---------  110 (703)
Q Consensus        45 gH~~~V~~l~~sp~~dg~~L--~-sgs~Dg~--V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s---------  110 (703)
                      .+.++...++..+  +++..  + ++..+++  +.+||..+++....+..+...  .++|+|||+.|++++         
T Consensus        17 ~~~g~~~~~a~~~--~~~~~~v~~~~~~~g~~~~~~~d~~~~~~~~~~~~~~~~--~~a~spDg~~i~~~~~~~~~~~~g   92 (368)
T d1mdah_          17 ASDGSSCDHGPGA--ISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKG   92 (368)
T ss_dssp             CCCCCCBCCCCCC--CTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSS
T ss_pred             ccCCCccccccCC--CCcceeEEeeccCCCcceEEEEeCCCCcEEEEEeCCCCC--cceECCCCCEEEEEcccCcccccc
Confidence            3455555566677  77753  2 2345555  556687777655555544443  589999999988765         


Q ss_pred             -CCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe-cCCcEEEEECCCCceE
Q psy7108         111 -LDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG-QSKYICIYSSREGILL  188 (703)
Q Consensus       111 -~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s-~dg~I~lwD~~~~~~~  188 (703)
                       .|+.|.+||..+++.+..+..+......             .......++|+|||++++++. .++.+.+||+.+++..
T Consensus        93 ~~d~~v~v~D~~t~~~~~~i~~p~~~~~~-------------~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~  159 (368)
T d1mdah_          93 KRTDYVEVFDPVTFLPIADIELPDAPRFS-------------VGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDD  159 (368)
T ss_dssp             SEEEEEEEECTTTCCEEEEEEETTSCSCC-------------BSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEE
T ss_pred             ccCCeEEEEECCCCcEeeeecCCccceec-------------ccCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcEe
Confidence             3678999999999998888754321000             011223589999999998876 5689999999999988


Q ss_pred             EEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCC------------------------------eeEEECCCC
Q psy7108         189 KKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGG------------------------------NVVLKLPGV  238 (703)
Q Consensus       189 ~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~------------------------------~~~i~iwd~  238 (703)
                      ..+..+..... ........+.+++||+..++...++....                              ...+.+++.
T Consensus       160 ~~~~~~~~~~~-~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~  238 (368)
T d1mdah_         160 QLTKSASCFHI-HPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDI  238 (368)
T ss_dssp             EEEECSSCCCC-EEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBSSCCEEEEC
T ss_pred             EEeeccCcceE-ccCCCceEEEEcCCCCEEEEEecCCceeeeeeecccccccccceeecccccCcEEEEecCCCEEEEee
Confidence            88765543211 11223344667777776665543321100                              001111121


Q ss_pred             CCCcccee--ecCC----------ccceEEEEEcCCCCEEEEEeCC---------C-EEEEEcCCCceeccee-----ee
Q psy7108         239 KKGDMAAR--VLKP----------EVRVFCVKFSPTGQAWVAATTE---------G-VHIYSLDSGYVFDPFL-----LD  291 (703)
Q Consensus       239 ~~~~~~~~--~~~h----------~~~V~~l~~spdg~~l~s~s~D---------g-v~iwd~~~~~~~~~~~-----~~  291 (703)
                      ..+.....  ...+          ......++++|++..++....+         . +.+||..+++....+.     ..
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~  318 (368)
T d1mdah_         239 PAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDA  318 (368)
T ss_dssp             CSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECE
T ss_pred             cCCceEEEeecccccceeeeeeecCCCceeEEEcCCCCEEEEEecCCCceeecCCceEEEEECCCCcEeEEecCCCceeE
Confidence            11111100  0000          1113457889998887554321         2 7799999998765543     56


Q ss_pred             EEEccchhhhHhhcCCcceEEEEEEecCchh
Q psy7108         292 ISITPQSVKEALADKDYAKALMMSLKLNEQG  322 (703)
Q Consensus       292 ~~~spd~~~~~l~sg~~~~~l~la~~l~~~~  322 (703)
                      ++|+||+...+.+++..++.+.+ |+....+
T Consensus       319 ~a~spDG~~~ly~s~~~~~~v~v-~D~~tgk  348 (368)
T d1mdah_         319 IIAAQDGASDNYANSAGTEVLDI-YDAASDQ  348 (368)
T ss_dssp             EEECCSSSCEEEEEETTTTEEEE-EESSSCE
T ss_pred             EEECCCCCEEEEEEeCCCCeEEE-EECCCCC
Confidence            89999984335667777888888 8876543

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.04  E-value=6.5e-08  Score=94.75  Aligned_cols=226  Identities=13%  Similarity=0.193  Sum_probs=141.9

Q ss_pred             ccCCceEEecCCceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCC---cEEEEEcCCCceeEEEecCCC
Q psy7108          16 HEGGNVVLKLPGVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDK---TVKLWNAVETDTQHETIQLLS   92 (703)
Q Consensus        16 ~~~~~~~i~~~~v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg---~V~iWd~~~~~~~~~~~~~~~   92 (703)
                      ++++.....+|   +.|.+|.-.  +.+..+...+...+|||  ||+.||......   .+.+.+..++ .......+.+
T Consensus        12 ~~~~~~~~~l~---i~d~dG~~~--~~l~~~~~~~~sP~wSP--DGk~IAf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~   83 (269)
T d2hqsa1          12 TNGGQFPYELR---VSDYDGYNQ--FVVHRSPQPLMSPAWSP--DGSKLAYVTFESGRSALVIQTLANG-AVRQVASFPR   83 (269)
T ss_dssp             CSSSSCCEEEE---EEETTSCSC--EEEEEESSCEEEEEECT--TSSEEEEEECTTSSCEEEEEETTTC-CEEEEECCSS
T ss_pred             eCCCCceEEEE---EEcCCCCCc--EEEecCCCceeeeEECC--CCCEEEEEEeeccCcceeeeecccC-ceeEEeeeec
Confidence            33444434444   446678766  77777888999999999  999999775443   3555565544 4556666788


Q ss_pred             cEEEEEEecCCCEEEEEECC-Ce--EEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEE
Q psy7108          93 DALCVAYKPDGTEIVVATLD-GQ--LIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCIL  169 (703)
Q Consensus        93 ~V~~v~~spdg~~las~s~d-g~--I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~  169 (703)
                      ......|+|+|+.++..... +.  +..+.............                     ........++++++.+.
T Consensus        84 ~~~~~~~spdg~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~  142 (269)
T d2hqsa1          84 HNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDG---------------------RSNNTEPTWFPDSQNLA  142 (269)
T ss_dssp             CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCC---------------------SSCEEEEEECTTSSEEE
T ss_pred             ccccceecCCCCeeeEeeecCCccceeecccccccceeeeec---------------------cccccccccccccccce
Confidence            88999999999988876543 22  33333333322222211                     11345566788777665


Q ss_pred             EEe-cCC--cEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcccee
Q psy7108         170 AAG-QSK--YICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAAR  246 (703)
Q Consensus       170 s~s-~dg--~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~  246 (703)
                      ..+ .++  .|.+.++..+......         ..........++|+++.++.....+   +...+.+.+...+..  .
T Consensus       143 ~~~~~~g~~~i~~~~~~~~~~~~~~---------~~~~~~~~~~~spdg~~~~~~~~~~---~~~~i~~~~~~~~~~--~  208 (269)
T d2hqsa1         143 FTSDQAGRPQVYKVNINGGAPQRIT---------WEGSQNQDADVSSDGKFMVMVSSNG---GQQHIAKQDLATGGV--Q  208 (269)
T ss_dssp             EEECTTSSCEEEEEETTSSCCEECC---------CSSSEEEEEEECTTSSEEEEEEECS---SCEEEEEEETTTCCE--E
T ss_pred             ecccccCCceEeeeecccccceeee---------cccccccccccccccceeEEEeecC---CceeeeEeecccccc--e
Confidence            543 344  4666676665432221         1123556778999999988877643   334666666665543  3


Q ss_pred             ecCCccceEEEEEcCCCCEEEEEeCC-C---EEEEEcCCCce
Q psy7108         247 VLKPEVRVFCVKFSPTGQAWVAATTE-G---VHIYSLDSGYV  284 (703)
Q Consensus       247 ~~~h~~~V~~l~~spdg~~l~s~s~D-g---v~iwd~~~~~~  284 (703)
                      ...+........|||||+.|+..+.. +   +.+++++.+..
T Consensus       209 ~~~~~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~dg~~~  250 (269)
T d2hqsa1         209 VLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFK  250 (269)
T ss_dssp             ECCCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCE
T ss_pred             EeecCccccceEECCCCCEEEEEEcCCCCcEEEEEECCCCCE
Confidence            33445566788999999998655443 2   78999987754

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.95  E-value=2.6e-09  Score=114.68  Aligned_cols=148  Identities=9%  Similarity=0.037  Sum_probs=97.8

Q ss_pred             ceeec-cCCCcc---ccccccCCCcCeEEEEEcCCCCCCEEEEEeC---------CCcEEEEEcCCCceeEEEecCCCcE
Q psy7108          28 VKKGD-MAARVL---KPEVLSGHEGPVSCIEFSPVLSSTGMVSASW---------DKTVKLWNAVETDTQHETIQLLSDA   94 (703)
Q Consensus        28 v~~~d-~tg~~~---~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~---------Dg~V~iWd~~~~~~~~~~~~~~~~V   94 (703)
                      +.+|| .+|+..   ....+..|...|.++.|||  ||++|++++.         ++.+.+||+.++ ....+..+...+
T Consensus        38 ~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~Sp--Dg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~-~~~~l~~~~~~~  114 (470)
T d2bgra1          38 ILVFNAEYGNSSVFLENSTFDEFGHSINDYSISP--DGQFILLEYNYVKQWRHSYTASYDIYDLNKR-QLITEERIPNNT  114 (470)
T ss_dssp             EEEEETTTCCEEEEECTTTTTTSSSCCCEEEECT--TSSEEEEEEEEEECSSSCEEEEEEEEETTTT-EECCSSCCCTTE
T ss_pred             EEEEECCCCCEEEEEchhhhhhccCccceeEECC--CCCEEEEEECCcceeeeccCceEEEEECCCC-cccccccCCccc
Confidence            34455 355543   2235566778999999999  9999998853         567889999887 456667788899


Q ss_pred             EEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC
Q psy7108          95 LCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS  174 (703)
Q Consensus        95 ~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d  174 (703)
                      ..+.|||||+.+|.. .++.+++|+..+++..........-..-....+..  ......+....+.|||||+.|+....|
T Consensus       115 ~~~~~SPDG~~ia~~-~~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~--~~~~~~~~~~~~~wSPDGk~ia~~~~d  191 (470)
T d2bgra1         115 QWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWV--YEEEVFSAYSALWWSPNGTFLAYAQFN  191 (470)
T ss_dssp             EEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHH--HHHHTSSSSBCEEECTTSSEEEEEEEE
T ss_pred             cccccccCcceeeEe-ecccceEEECCCCceeeeeeccCCCccccccccee--eeeeecCCccccEECCCCCccceeEec
Confidence            999999999999996 57799999999887765443221100000000000  001112234567899999999997655


Q ss_pred             Cc-EEEEE
Q psy7108         175 KY-ICIYS  181 (703)
Q Consensus       175 g~-I~lwD  181 (703)
                      .+ +..|+
T Consensus       192 ~~~v~~~~  199 (470)
T d2bgra1         192 DTEVPLIE  199 (470)
T ss_dssp             CTTCCEEE
T ss_pred             CCcCceEE
Confidence            43 44443

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=98.90  E-value=5.5e-08  Score=101.53  Aligned_cols=224  Identities=8%  Similarity=0.066  Sum_probs=144.7

Q ss_pred             EEEEeCCCcEEEEEcCCCceeEEEec------------------------------CCCcEEEEEEecCCCEEEEEE-CC
Q psy7108          64 MVSASWDKTVKLWNAVETDTQHETIQ------------------------------LLSDALCVAYKPDGTEIVVAT-LD  112 (703)
Q Consensus        64 L~sgs~Dg~V~iWd~~~~~~~~~~~~------------------------------~~~~V~~v~~spdg~~las~s-~d  112 (703)
                      ++|++.+|+|++|++.+++.+..+.-                              |.-.......+|||++|++.. .+
T Consensus        14 f~Sgg~sG~V~V~dlpS~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gtpDGr~lfV~d~~~   93 (441)
T d1qnia2          14 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKYLFINDKAN   93 (441)
T ss_dssp             EEECBTTCCEEEEEETTTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEEEEEEEEEEETTT
T ss_pred             EEeCCCCCcEEEEeCCCCcEEEEEEeEcCCCCEEEEECCccceEEecccccccCcccCCCcceecccCCCCEEEEEcCCC
Confidence            56778899999999988865554311                              122344555689999987665 57


Q ss_pred             CeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCE--EEEEecCC---------------
Q psy7108         113 GQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSC--ILAAGQSK---------------  175 (703)
Q Consensus       113 g~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~--l~s~s~dg---------------  175 (703)
                      ++|.++|+++++....++-..                   ......++|+|+|+.  ++..+.+.               
T Consensus        94 ~rVavIDl~t~k~~~ii~iP~-------------------g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~  154 (441)
T d1qnia2          94 TRVARIRLDIMKTDKITHIPN-------------------VQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNS  154 (441)
T ss_dssp             TEEEEEETTTTEEEEEEECTT-------------------CCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGE
T ss_pred             CEEEEEECCCCcEeeEEecCC-------------------CCCccceEEeccCCEEEEEeccCCcccccCcccccccccc
Confidence            899999999999887765422                   226889999999985  33333321               


Q ss_pred             --cEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCC-------------------------
Q psy7108         176 --YICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEG-------------------------  228 (703)
Q Consensus       176 --~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~-------------------------  228 (703)
                        .+..+|..+.+...+.....         ....+.++|+|+++++++.+....                         
T Consensus       155 ~~~~~~iD~~t~~v~~qI~v~~---------~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~  225 (441)
T d1qnia2         155 YTMFTAIDAETMDVAWQVIVDG---------NLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAA  225 (441)
T ss_dssp             EEEEEEEETTTCSEEEEEEESS---------CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHH
T ss_pred             cceEEeecCccceeeEEEecCC---------CccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEE
Confidence              23557888777766655332         456789999999988877543110                         


Q ss_pred             ----------CeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEE-eCCC-EEEEEcCCCcee--------cce
Q psy7108         229 ----------GNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAA-TTEG-VHIYSLDSGYVF--------DPF  288 (703)
Q Consensus       229 ----------~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~-s~Dg-v~iwd~~~~~~~--------~~~  288 (703)
                                +...+.+++....+.+..+..+ .....+.++|||++++++ ..++ |.|||+++....        ...
T Consensus       226 ~~dGk~~~v~~~~v~vvd~~~~~~v~~~IPvg-ksPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~  304 (441)
T d1qnia2         226 VKAGNFKTIGDSKVPVVDGRGESEFTRYIPVP-KNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTI  304 (441)
T ss_dssp             HHTTCCBCCTTCCCCEEECSSSCSSEEEECCB-SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGGGE
T ss_pred             ecCCCEEEeCCCCcEEEEcccCCceEEEEeCC-CCccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccCCcceEE
Confidence                      1123334444443444444433 335789999999998554 5566 999998653210        011


Q ss_pred             ---------eeeEEEccchhhhHhhcCCcceEEEEEEecC
Q psy7108         289 ---------LLDISITPQSVKEALADKDYAKALMMSLKLN  319 (703)
Q Consensus       289 ---------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~  319 (703)
                               .+..+|.+++  ....+...+..+.. |++.
T Consensus       305 ~~~~~~glgplh~~fd~~g--~~yts~~~ds~v~k-w~~~  341 (441)
T d1qnia2         305 VAEPELGLGPLHTTFDGRG--NAYTTLFIDSQVCK-WNIA  341 (441)
T ss_dssp             EECCBCCSCEEEEEECSSS--EEEEEETTTTEEEE-EEHH
T ss_pred             EeecccccCcccceecCCc--eEEEcccccceEEE-eccc
Confidence                     1345788887  56666666667655 7763

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.85  E-value=5.1e-09  Score=112.33  Aligned_cols=152  Identities=13%  Similarity=0.068  Sum_probs=111.2

Q ss_pred             EEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec-
Q psy7108          95 LCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ-  173 (703)
Q Consensus        95 ~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~-  173 (703)
                      ..+.|.++++++..  .|+.+.+||+.+++....+..+.-               ..+...|.++.|||||++|+.++. 
T Consensus        20 ~~~~W~~d~~~~~~--~~~~~~~~~~~t~~~~~~~~~~~~---------------~~~~~~i~~~~~SpDg~~i~~~~~~   82 (470)
T d2bgra1          20 YSLRWISDHEYLYK--QENNILVFNAEYGNSSVFLENSTF---------------DEFGHSINDYSISPDGQFILLEYNY   82 (470)
T ss_dssp             CCCEECSSSEEEEE--SSSCEEEEETTTCCEEEEECTTTT---------------TTSSSCCCEEEECTTSSEEEEEEEE
T ss_pred             cCCEeCCCCEEEEE--cCCcEEEEECCCCCEEEEEchhhh---------------hhccCccceeEECCCCCEEEEEECC
Confidence            45789999987653  578899999999998776665431               223457899999999999998753 


Q ss_pred             --------CCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccce
Q psy7108         174 --------SKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAA  245 (703)
Q Consensus       174 --------dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~  245 (703)
                              ++.+.+||+.+++.. .        +..+...+..+.|||||+.++.....       .+.+|+..+++..+
T Consensus        83 ~~~~r~s~~~~~~l~d~~~~~~~-~--------l~~~~~~~~~~~~SPDG~~ia~~~~~-------~l~~~~~~~g~~~~  146 (470)
T d2bgra1          83 VKQWRHSYTASYDIYDLNKRQLI-T--------EERIPNNTQWVTWSPVGHKLAYVWNN-------DIYVKIEPNLPSYR  146 (470)
T ss_dssp             EECSSSCEEEEEEEEETTTTEEC-C--------SSCCCTTEEEEEECSSTTCEEEEETT-------EEEEESSTTSCCEE
T ss_pred             cceeeeccCceEEEEECCCCccc-c--------cccCCccccccccccCcceeeEeecc-------cceEEECCCCceee
Confidence                    467899999988642 2        22344578899999999999986543       68999988887655


Q ss_pred             eecCC------------------ccceEEEEEcCCCCEEEEEeCCC--EEEEEc
Q psy7108         246 RVLKP------------------EVRVFCVKFSPTGQAWVAATTEG--VHIYSL  279 (703)
Q Consensus       246 ~~~~h------------------~~~V~~l~~spdg~~l~s~s~Dg--v~iwd~  279 (703)
                      ....+                  .+....+.|||||+.|+....|.  +..|.+
T Consensus       147 ~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~d~~~v~~~~~  200 (470)
T d2bgra1         147 ITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEY  200 (470)
T ss_dssp             CCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEE
T ss_pred             eeeccCCCcccccccceeeeeeecCCccccEECCCCCccceeEecCCcCceEEE
Confidence            44322                  12345678999999998887654  555543

>d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Gastric lipase
domain: Gastric lipase
species: Dog (Canis familiaris) [TaxId: 9615]

Probab=98.80  E-value=1.5e-10  Score=120.05  Aligned_cols=109  Identities=36%  Similarity=0.559  Sum_probs=92.6

Q ss_pred             cCCCcccchhhhhhcccccccceeecccCccccccCcccCcCCccceeeeecccchhhhhhhhcCCcccccccccccCCC
Q psy7108         408 FDDTKFLPPTLFARMRTRGYDIWLWNARGNVYSREHVNLTSEQNKFYRFSCDFNVYTLELISRLGPLRIKPKVEKMETGS  487 (703)
Q Consensus       408 ~n~~~~sl~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  487 (703)
                      .+.+..+|+..+++   +|||||+.|.||..+|..+........++|.+.++                            
T Consensus        76 ~~~~~~sla~~L~~---~Gy~V~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~----------------------------  124 (377)
T d1k8qa_          76 SNLPNNSLAFILAD---AGYDVWLGNSRGNTWARRNLYYSPDSVEFWAFSFD----------------------------  124 (377)
T ss_dssp             SSCTTTCHHHHHHH---TTCEEEECCCTTSTTSCEESSSCTTSTTTTCCCHH----------------------------
T ss_pred             hcCccchHHHHHHH---CCCEEEEEcCCCCCCCCCCCCCCCcchhhccCCHH----------------------------
Confidence            33345778888887   99999999999999999988888888888988888                            


Q ss_pred             CCCcCCCcccceeecccCcCCCCCCccccccCchhhhhcccCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCc
Q psy7108         488 SDEESSKDDETEIRVLDEDVPRSSDTGDIQLKSTRMNELGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRP  567 (703)
Q Consensus       488 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~  567 (703)
                                                           +.+.+|+++++++|++..+.+++.++|||+||+.+|.++.+.|
T Consensus       125 -------------------------------------~~~~~Dl~~~i~~i~~~~g~~~v~lvGhS~GG~ia~~~a~~~p  167 (377)
T d1k8qa_         125 -------------------------------------EMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNP  167 (377)
T ss_dssp             -------------------------------------HHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCH
T ss_pred             -------------------------------------HHhhhhHHHHHHHHHHHcCCCCEEEEEecchHHHHHHHHHhhh
Confidence                                                 8999999999999999999999999999999999999888888


Q ss_pred             hhhhhHHHhhhhhhhhh
Q psy7108         568 EYQTKVRLNVLWAQSAF  584 (703)
Q Consensus       568 ~~~~~~~~~~~~~p~~~  584 (703)
                      +..+++......+|...
T Consensus       168 ~~~~~l~~~~~~~~~~~  184 (377)
T d1k8qa_         168 KLAKRIKTFYALAPVAT  184 (377)
T ss_dssp             HHHTTEEEEEEESCCSC
T ss_pred             hhhhhceeEeecccccc
Confidence            77777665555555443

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=98.78  E-value=5.6e-08  Score=101.48  Aligned_cols=198  Identities=10%  Similarity=0.027  Sum_probs=129.7

Q ss_pred             CCcCeEEEEEcCCCCCCEEEEE-eCCCcEEEEEcCCCceeEEE-ecCCCcEEEEEEecCCC--EEEEEECCC--------
Q psy7108          46 HEGPVSCIEFSPVLSSTGMVSA-SWDKTVKLWNAVETDTQHET-IQLLSDALCVAYKPDGT--EIVVATLDG--------  113 (703)
Q Consensus        46 H~~~V~~l~~sp~~dg~~L~sg-s~Dg~V~iWd~~~~~~~~~~-~~~~~~V~~v~~spdg~--~las~s~dg--------  113 (703)
                      |.-.......+|  ||++|+.. ..++.|.++|+.+.+....+ ......+..++|+|+|+  +++..+.+.        
T Consensus        70 hhP~~s~t~gtp--DGr~lfV~d~~~~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~  147 (441)
T d1qnia2          70 HHPHISMTDGRY--DGKYLFINDKANTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGT  147 (441)
T ss_dssp             CCCEEEEETTEE--EEEEEEEEETTTTEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSS
T ss_pred             cCCCcceecccC--CCCEEEEEcCCCCEEEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCccc
Confidence            545566677789  99988665 56789999999998654443 34677899999999998  444444332        


Q ss_pred             ---------eEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC----------
Q psy7108         114 ---------QLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS----------  174 (703)
Q Consensus       114 ---------~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d----------  174 (703)
                               .+..+|..+.+....+....                     ....++++|||+++++++.+          
T Consensus       148 ~~~~~~~~~~~~~iD~~t~~v~~qI~v~~---------------------~p~~v~~spdGk~a~vt~~nse~~~~id~~  206 (441)
T d1qnia2         148 DFSLDNSYTMFTAIDAETMDVAWQVIVDG---------------------NLDNTDADYTGKYATSTCYNSERAVDLAGT  206 (441)
T ss_dssp             CCCGGGEEEEEEEEETTTCSEEEEEEESS---------------------CCCCEEECSSSSEEEEEESCTTCCSSHHHH
T ss_pred             ccccccccceEEeecCccceeeEEEecCC---------------------CccceEECCCCCEEEEEecCCCceEEEecc
Confidence                     23557777777666655432                     34567888888887766533          


Q ss_pred             -------------------------------CcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcc
Q psy7108         175 -------------------------------KYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETR  223 (703)
Q Consensus       175 -------------------------------g~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~  223 (703)
                                                     +.+.+++......+..+...         .....+.++|||+++++++.
T Consensus       207 t~~~~d~i~v~n~p~~~~~~~dGk~~~v~~~~v~vvd~~~~~~v~~~IPvg---------ksPhGv~vSPDGkyl~~~~~  277 (441)
T d1qnia2         207 MRNDRDWVVVFNVERIAAAVKAGNFKTIGDSKVPVVDGRGESEFTRYIPVP---------KNPHGLNTSPDGKYFIANGK  277 (441)
T ss_dssp             TCSSBCEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSSSCSSEEEECCB---------SSCCCEEECTTSCEEEEECT
T ss_pred             CcceEEEEEeCCccceEEEecCCCEEEeCCCCcEEEEcccCCceEEEEeCC---------CCccCceECCCCCEEEEeCC
Confidence                                           23334443333344443322         13456899999999988775


Q ss_pred             cCCCCCeeEEECCCCCCCccc--------eeecC---CccceEEEEEcCCCCEEEEEeCCC-EEEEEcC
Q psy7108         224 ETHEGGNVVLKLPGVKKGDMA--------ARVLK---PEVRVFCVKFSPTGQAWVAATTEG-VHIYSLD  280 (703)
Q Consensus       224 ~~~~~~~~~i~iwd~~~~~~~--------~~~~~---h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~  280 (703)
                      .+     .++.+||+.+.+..        ..+.+   ..-.....+|+++|+...+..-|. |..|++.
T Consensus       278 ~~-----~tvsv~d~~k~~~~~~~~~~~~~~~~~~~~~glgplh~~fd~~g~~yts~~~ds~v~kw~~~  341 (441)
T d1qnia2         278 LS-----PTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIA  341 (441)
T ss_dssp             TS-----SBEEEEEGGGHHHHTTTSSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEHH
T ss_pred             cC-----CcEEEEEeehhhhHhhccCCcceEEEeecccccCcccceecCCceEEEcccccceEEEeccc
Confidence            53     48999998763211        11111   111234568999998888888898 9999974

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=98.74  E-value=1.1e-06  Score=90.46  Aligned_cols=177  Identities=12%  Similarity=0.074  Sum_probs=106.7

Q ss_pred             CcEEEEEEecCCCEEEEEEC-CCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEE
Q psy7108          92 SDALCVAYKPDGTEIVVATL-DGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILA  170 (703)
Q Consensus        92 ~~V~~v~~spdg~~las~s~-dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s  170 (703)
                      ..+.+++|+|||++++++.. ...|.+|+......+........               ...+.....++|+|+++++.+
T Consensus       145 ~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~---------------~~~g~gPr~i~f~pdg~~~yv  209 (365)
T d1jofa_         145 TGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDA---------------PDPGDHPRWVAMHPTGNYLYA  209 (365)
T ss_dssp             CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEEC---------------SSTTCCEEEEEECTTSSEEEE
T ss_pred             CcceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeeccceee---------------cCCCCceEEEEECCCCceEEE
Confidence            45789999999998888765 45788887754332222211110               011236788999999998866


Q ss_pred             Ee-cCCcEEEEECCCCceEEEEEeccC-----------CccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCC
Q psy7108         171 AG-QSKYICIYSSREGILLKKFTITQN-----------KSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGV  238 (703)
Q Consensus       171 ~s-~dg~I~lwD~~~~~~~~~~~~~~~-----------~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~  238 (703)
                      .. .+++|.+||+..+...........           ............+.++|||++++++...........+..|++
T Consensus       210 ~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~  289 (365)
T d1jofa_         210 LMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKL  289 (365)
T ss_dssp             EETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEE
T ss_pred             eccCCCEEEEEEecCCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEe
Confidence            54 578899999876543222111100           000111223456889999999988765432222234555554


Q ss_pred             CCCccce------eecCCccceEEEEEcC-CCCEEEEEeCC-C-EEEEEcCCCc
Q psy7108         239 KKGDMAA------RVLKPEVRVFCVKFSP-TGQAWVAATTE-G-VHIYSLDSGY  283 (703)
Q Consensus       239 ~~~~~~~------~~~~h~~~V~~l~~sp-dg~~l~s~s~D-g-v~iwd~~~~~  283 (703)
                      .....+.      ..........+++++| +|++|+++..+ + |.+|+++...
T Consensus       290 ~~~g~~~~~~~~~~~~~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~~~~  343 (365)
T d1jofa_         290 RDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDEF  343 (365)
T ss_dssp             CTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETTE
T ss_pred             cCCCceeeEeEeeEEEcCCCCccEEEecCCCCCEEEEEeCCCCeEEEEEEeCCc
Confidence            4321111      1112334567799998 89998777655 4 9999876543

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.71  E-value=7e-07  Score=87.23  Aligned_cols=213  Identities=10%  Similarity=0.042  Sum_probs=130.1

Q ss_pred             CeEEEEEcCCCCCCEEEEE-eCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEE
Q psy7108          49 PVSCIEFSPVLSSTGMVSA-SWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVG  127 (703)
Q Consensus        49 ~V~~l~~sp~~dg~~L~sg-s~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~  127 (703)
                      .-.++++++  +|+..++. +..+.+..++...................++++++|+.+++....+.+++++-.+...+.
T Consensus        15 ~P~~vavd~--dG~i~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~gvav~~~g~i~v~d~~~~~i~~~~~~~~~~~~   92 (260)
T d1rwia_          15 SPSGVAVDS--AGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVL   92 (260)
T ss_dssp             CEEEEEECT--TCCEEEEECSSSCEEEEEC----CEEECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEEC
T ss_pred             CCCEEEEcC--CCCEEEEEcCCCCEEEEEcCCCceEEEeccCCccCceEEEEcCCCCEEEeeeeeceeeeeeeccceeee
Confidence            347999999  99977665 445666666654432222222223456788999999877776666666666554444332


Q ss_pred             EEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccce
Q psy7108         128 SVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFIN  207 (703)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~  207 (703)
                      ....                     ......+++.++++.+++-..+..+..++...... ..+.. ..      .....
T Consensus        93 ~~~~---------------------~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~-~~~~~-~~------~~~p~  143 (260)
T d1rwia_          93 PFDG---------------------LNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ-TVLPF-TG------LNDPD  143 (260)
T ss_dssp             CCCS---------------------CCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSC-EECCC-CS------CCSCC
T ss_pred             eeee---------------------eeecccccccccceeEeecccccccccccccccee-eeeee-cc------cCCcc
Confidence            2211                     12578899999999877766666777777655432 11111 11      12446


Q ss_pred             eeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCcee-
Q psy7108         208 RRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVF-  285 (703)
Q Consensus       208 ~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~-  285 (703)
                      .++++++|+.+++....      ..+..+|.............-.....++++++|+.+++....+ |..++....... 
T Consensus       144 ~i~~~~~g~~~v~~~~~------~~i~~~d~~~~~~~~~~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~~~~~  217 (260)
T d1rwia_         144 GVAVDNSGNVYVTDTDN------NRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV  217 (260)
T ss_dssp             EEEECTTCCEEEEEGGG------TEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTTEEEEECTTCSCCEE
T ss_pred             eeeecCCCCEeeecccc------ccccccccccceeeeeeccccCCCccceeeeeeeeeeeecCCCEEEEEeCCCCeEEE
Confidence            78999999876665544      2677788765443332223445678999999998877777777 777776543221 


Q ss_pred             ---cc--eeeeEEEccch
Q psy7108         286 ---DP--FLLDISITPQS  298 (703)
Q Consensus       286 ---~~--~~~~~~~spd~  298 (703)
                         ..  ....+++++++
T Consensus       218 ~~~~~~~~P~~i~~d~~g  235 (260)
T d1rwia_         218 LPFTGLNTPLAVAVDSDR  235 (260)
T ss_dssp             CCCCSCCCEEEEEECTTC
T ss_pred             EccCCCCCeEEEEEeCCC
Confidence               11  12467888877

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=98.71  E-value=6.1e-07  Score=89.78  Aligned_cols=205  Identities=12%  Similarity=0.060  Sum_probs=132.6

Q ss_pred             CeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcE-EE
Q psy7108          49 PVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQ-VG  127 (703)
Q Consensus        49 ~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~-~~  127 (703)
                      .+..++++|  ||+++++...+++|..|+...  ...........+.+++|++||+.+++...++.+..|+...... ..
T Consensus        29 ~~e~iAv~p--dG~l~vt~~~~~~I~~i~p~g--~~~~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~  104 (302)
T d2p4oa1          29 FLENLASAP--DGTIFVTNHEVGEIVSITPDG--NQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVE  104 (302)
T ss_dssp             CEEEEEECT--TSCEEEEETTTTEEEEECTTC--CEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEE
T ss_pred             CcCCEEECC--CCCEEEEeCCCCEEEEEeCCC--CEEEEEcCCCCcceEEEcCCCCeEEEecCCceEEEEEeccccccee
Confidence            578899999  999999999999888877543  3455566778899999999999989888888888887654321 12


Q ss_pred             EEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccc--ccccc
Q psy7108         128 SVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLD--GINDF  205 (703)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~--~~~~~  205 (703)
                      .+....                  .......+++.++++++++.+.++.+..+|...+...............  .....
T Consensus       105 ~~~~~~------------------~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (302)
T d2p4oa1         105 TLLTLP------------------DAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPA  166 (302)
T ss_dssp             EEEECT------------------TCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCS
T ss_pred             eccccC------------------CccccceeEEccCCCEEeeccccccceeeeccCCcceeEecCCccceeeccCcccc
Confidence            221111                  1235789999999998888888899999998877544333322111111  11122


Q ss_pred             ceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccce--eecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCC
Q psy7108         206 INRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAA--RVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSG  282 (703)
Q Consensus       206 v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~--~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~  282 (703)
                      .+.+.+  ++..++++....     ..+..++........  ...........++++++|+.+++...++ |..++.+..
T Consensus       167 ~ngi~~--~~~~l~~~~~~~-----~~i~~~~~~~~~~~~~~~~~~~~~~pdgia~d~dG~l~va~~~~~~V~~i~p~G~  239 (302)
T d2p4oa1         167 ANGLKR--FGNFLYVSNTEK-----MLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDRS  239 (302)
T ss_dssp             EEEEEE--ETTEEEEEETTT-----TEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTTCC
T ss_pred             cccccc--cCCceeeecCCC-----CeEEeccccccccccccccccCCCCCcceEECCCCCEEEEEcCCCcEEEECCCCC
Confidence            334444  455555544332     256655554332211  1111223456799999999777777677 888876543

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=98.57  E-value=3e-06  Score=87.08  Aligned_cols=258  Identities=9%  Similarity=0.028  Sum_probs=143.8

Q ss_pred             CCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEe--cCCCcEEEEEEecCCCEEEEEE---CCCeEEEEEc
Q psy7108          46 HEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETI--QLLSDALCVAYKPDGTEIVVAT---LDGQLIMFDV  120 (703)
Q Consensus        46 H~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~--~~~~~V~~v~~spdg~~las~s---~dg~I~vwd~  120 (703)
                      ...+++-++|+|  +++.|++++. +.+..|.+..........  ........++++++++.+....   ..++|..+.+
T Consensus        38 ~~~~~s~la~s~--d~~~ly~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~~v~~a~~~~~~v~~~~~  114 (365)
T d1jofa_          38 QDEPISWMTFDH--ERKNIYGAAM-KKWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPF  114 (365)
T ss_dssp             TTCCCSEEEECT--TSSEEEEEEB-TEEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEE
T ss_pred             CCCCCCEEEEcC--CCCEEEEEeC-CcEEEEEEeCCCCeEEEeeecCCCCcEEEEECCCCCEEEEEEecCCCCEEEEeEc
Confidence            455677899999  9999988765 467777776443333222  2334456788899998543332   2456666655


Q ss_pred             CC-CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec-CCcEEEEECCCCceEEEEEeccCCc
Q psy7108         121 ES-AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ-SKYICIYSSREGILLKKFTITQNKS  198 (703)
Q Consensus       121 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~-dg~I~lwD~~~~~~~~~~~~~~~~~  198 (703)
                      .. +.....+......   ... .............+.++.|+|||+++++++. ...|.+|+......+......... 
T Consensus       115 ~~~~~~~~~~~~~~~~---~~~-~~~~~~~~q~~~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~-  189 (365)
T d1jofa_         115 YKFAGYGNVFSVSETG---KLE-KNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAP-  189 (365)
T ss_dssp             SSSCCEEEEEEECTTC---CEE-EEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECS-
T ss_pred             cCCCCcceeEeeeecc---eec-CcccCcccCCCCcceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeeccceeec-
Confidence            32 2222222111100   000 0000000011224789999999999888754 457888876543222211111110 


Q ss_pred             cccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceee-------------------cCCccceEEEEE
Q psy7108         199 LDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARV-------------------LKPEVRVFCVKF  259 (703)
Q Consensus       199 ~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~-------------------~~h~~~V~~l~~  259 (703)
                        ........++|+|+|+++++....+     ..|.+|+...+......                   ..+......+.+
T Consensus       190 --~~g~gPr~i~f~pdg~~~yv~~e~~-----~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  262 (365)
T d1jofa_         190 --DPGDHPRWVAMHPTGNYLYALMEAG-----NRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCAL  262 (365)
T ss_dssp             --STTCCEEEEEECTTSSEEEEEETTT-----TEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEE
T ss_pred             --CCCCceEEEEECCCCceEEEeccCC-----CEEEEEEecCCCceEEEEeeeeccccccccccccccccccCCccceEE
Confidence              0113567899999999888876543     47888877654322110                   012234567899


Q ss_pred             cCCCCEEEEEeC--C----C-EEEEEcCCCceecc------------eeeeEEEcc-chhhhHhhcCCcceEEEEEEecC
Q psy7108         260 SPTGQAWVAATT--E----G-VHIYSLDSGYVFDP------------FLLDISITP-QSVKEALADKDYAKALMMSLKLN  319 (703)
Q Consensus       260 spdg~~l~s~s~--D----g-v~iwd~~~~~~~~~------------~~~~~~~sp-d~~~~~l~sg~~~~~l~la~~l~  319 (703)
                      +|||++|+++..  +    + |..|++.....+..            ....++++| ++. .++.++..++.+.+ |+.+
T Consensus       263 spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~p~~G~-~l~va~~~s~~v~v-~~~~  340 (365)
T d1jofa_         263 TFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDE-WMAITDDQEGWLEI-YRWK  340 (365)
T ss_dssp             CTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTT-EEEEECSSSCEEEE-EEEE
T ss_pred             CCCCCEEEEEcccCCCccceEEEEEEecCCCceeeEeEeeEEEcCCCCccEEEecCCCCC-EEEEEeCCCCeEEE-EEEe
Confidence            999999977642  2    2 66677654322111            124588888 662 24455566777776 6654


Q ss_pred             c
Q psy7108         320 E  320 (703)
Q Consensus       320 ~  320 (703)
                      .
T Consensus       341 ~  341 (365)
T d1jofa_         341 D  341 (365)
T ss_dssp             T
T ss_pred             C
Confidence            3

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.51  E-value=6.8e-05  Score=73.36  Aligned_cols=218  Identities=13%  Similarity=0.160  Sum_probs=142.1

Q ss_pred             ceeeccCCCccccccccC------CCcCeEEEEEcCCCCCCEEEEE-eCCCcEEEEEcCCCceeEEEe-cCCCcEEEEEE
Q psy7108          28 VKKGDMAARVLKPEVLSG------HEGPVSCIEFSPVLSSTGMVSA-SWDKTVKLWNAVETDTQHETI-QLLSDALCVAY   99 (703)
Q Consensus        28 v~~~d~tg~~~~~~~l~g------H~~~V~~l~~sp~~dg~~L~sg-s~Dg~V~iWd~~~~~~~~~~~-~~~~~V~~v~~   99 (703)
                      ++++|.+|+.+  +.+..      ....-..+++.+. .+..+++. +.++.|..++. .+....... ........+++
T Consensus        46 I~v~d~~G~~~--~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~p~~~av  121 (279)
T d1q7fa_          46 IQIFDKEGRFK--FQFGECGKRDSQLLYPNRVAVVRN-SGDIIVTERSPTHQIQIYNQ-YGQFVRKFGATILQHPRGVTV  121 (279)
T ss_dssp             EEEECTTSCEE--EEECCBSSSTTCBSSEEEEEEETT-TTEEEEEECGGGCEEEEECT-TSCEEEEECTTTCSCEEEEEE
T ss_pred             EEEEeCCCCEE--EEecccCCCccccccccccccccc-ccccceeccCCccccccccc-cccceeecCCCcccccceecc
Confidence            66788888877  55421      1223455666651 34445444 34456677765 333333332 24456788999


Q ss_pred             ecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEE
Q psy7108         100 KPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICI  179 (703)
Q Consensus       100 spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~l  179 (703)
                      .++|..+++....+.+.+++.+ ++.+..+....                  +......+++.++++.+++....+.|++
T Consensus       122 d~~G~i~v~~~~~~~~~~~~~~-g~~~~~~g~~~------------------~~~~~~~i~~d~~g~i~v~d~~~~~V~~  182 (279)
T d1q7fa_         122 DNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSK------------------HLEFPNGVVVNDKQEIFISDNRAHCVKV  182 (279)
T ss_dssp             CTTSCEEEEETTTTEEEEECTT-SCEEEEEECTT------------------TCSSEEEEEECSSSEEEEEEGGGTEEEE
T ss_pred             ccCCcEEEEeeccceeeEeccC-Cceeecccccc------------------cccccceeeeccceeEEeeeccccceee
Confidence            9999988887777888888854 56666554322                  1236788999999988888888889999


Q ss_pred             EECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC--CccceEEE
Q psy7108         180 YSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK--PEVRVFCV  257 (703)
Q Consensus       180 wD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~--h~~~V~~l  257 (703)
                      ||.. ++.+.++...      +.......+++.++|+.+++.....     ..|.+++. +|+.+..+..  .......+
T Consensus       183 ~d~~-G~~~~~~g~~------g~~~~P~giavD~~G~i~Vad~~~~-----~~v~~f~~-~G~~~~~~~~~~~~~~p~~v  249 (279)
T d1q7fa_         183 FNYE-GQYLRQIGGE------GITNYPIGVGINSNGEILIADNHNN-----FNLTIFTQ-DGQLISALESKVKHAQCFDV  249 (279)
T ss_dssp             EETT-CCEEEEESCT------TTSCSEEEEEECTTCCEEEEECSSS-----CEEEEECT-TSCEEEEEEESSCCSCEEEE
T ss_pred             eecC-Cceeeeeccc------ccccCCcccccccCCeEEEEECCCC-----cEEEEECC-CCCEEEEEeCCCCCCCEeEE
Confidence            9965 5666665321      2223557789999999776644321     36888884 5666555432  23457899


Q ss_pred             EEcCCCCEEEEEeCCC-EEEEEcCCC
Q psy7108         258 KFSPTGQAWVAATTEG-VHIYSLDSG  282 (703)
Q Consensus       258 ~~spdg~~l~s~s~Dg-v~iwd~~~~  282 (703)
                      ++.|||..+++ +.+. |++|.....
T Consensus       250 av~~dG~l~V~-~~n~~v~~fr~~~~  274 (279)
T d1q7fa_         250 ALMDDGSVVLA-SKDYRLYIYRYVQL  274 (279)
T ss_dssp             EEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred             EEeCCCcEEEE-eCCCeEEEEEeeee
Confidence            99999975554 4566 999997654

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=98.43  E-value=3.8e-05  Score=74.25  Aligned_cols=213  Identities=13%  Similarity=0.132  Sum_probs=131.8

Q ss_pred             EEeeecccCCceEEecCC-----ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeC-CCcEEEEEcC-CCc
Q psy7108          10 IETRETHEGGNVVLKLPG-----VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASW-DKTVKLWNAV-ETD   82 (703)
Q Consensus        10 ~~~~~~~~~~~~~i~~~~-----v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~-Dg~V~iWd~~-~~~   82 (703)
                      ....+..+|...++....     +...+..+...  +.+..+.+...+..|+|  +|..++..+. ++...++... ...
T Consensus        42 ~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~sp--dg~~i~~~~~~~~~~~~~~~~~~~~  117 (269)
T d2hqsa1          42 MSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV--RQVASFPRHNGAPAFSP--DGSKLAFALSKTGSLNLYVMDLASG  117 (269)
T ss_dssp             EEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE--EEEECCSSCEEEEEECT--TSSEEEEEECTTSSCEEEEEETTTC
T ss_pred             eeeEECCCCCEEEEEEeeccCcceeeeecccCce--eEEeeeecccccceecC--CCCeeeEeeecCCccceeecccccc
Confidence            345566666666554322     11223445544  66777888999999999  9998887654 3333333222 222


Q ss_pred             eeEEEecCCCcEEEEEEecCCCEEEEEE-CCC--eEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEE
Q psy7108          83 TQHETIQLLSDALCVAYKPDGTEIVVAT-LDG--QLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTV  159 (703)
Q Consensus        83 ~~~~~~~~~~~V~~v~~spdg~~las~s-~dg--~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i  159 (703)
                      ................+++++..++..+ .++  .|...++..+........                     .......
T Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~---------------------~~~~~~~  176 (269)
T d2hqsa1         118 QIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWE---------------------GSQNQDA  176 (269)
T ss_dssp             CEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCS---------------------SSEEEEE
T ss_pred             cceeeeeccccccccccccccccceecccccCCceEeeeecccccceeeecc---------------------ccccccc
Confidence            3334444555566677888887665554 344  466666665543322211                     2256778


Q ss_pred             EEcCCCCEEEEEecCC---cEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECC
Q psy7108         160 CYSADGSCILAAGQSK---YICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLP  236 (703)
Q Consensus       160 ~~spdg~~l~s~s~dg---~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iw  236 (703)
                      .|+|+++.++..+.++   .+.+.|...+...  .....        .......|||||+.+++.+..   ++...+.++
T Consensus       177 ~~spdg~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~--------~~~~~p~~SPDG~~i~f~s~~---~~~~~l~~~  243 (269)
T d2hqsa1         177 DVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ--VLSST--------FLDETPSLAPNGTMVIYSSSQ---GMGSVLNLV  243 (269)
T ss_dssp             EECTTSSEEEEEEECSSCEEEEEEETTTCCEE--ECCCS--------SSCEEEEECTTSSEEEEEEEE---TTEEEEEEE
T ss_pred             ccccccceeEEEeecCCceeeeEeecccccce--EeecC--------ccccceEECCCCCEEEEEEcC---CCCcEEEEE
Confidence            9999999998876544   4556666655432  21111        245677899999999887654   234678999


Q ss_pred             CCCCCccceeecCCccceEEEEEcC
Q psy7108         237 GVKKGDMAARVLKPEVRVFCVKFSP  261 (703)
Q Consensus       237 d~~~~~~~~~~~~h~~~V~~l~~sp  261 (703)
                      ++..+.. ..+....+.+...+|||
T Consensus       244 ~~dg~~~-~~lt~~~g~~~~p~WSP  267 (269)
T d2hqsa1         244 STDGRFK-ARLPATDGQVKFPAWSP  267 (269)
T ss_dssp             ETTSCCE-EECCCSSSEEEEEEECC
T ss_pred             ECCCCCE-EEEeCCCCcEEeEEeCC
Confidence            9876654 45556677888899998

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.43  E-value=6.2e-05  Score=75.33  Aligned_cols=206  Identities=10%  Similarity=0.089  Sum_probs=130.1

Q ss_pred             CcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECC----CeEEEEEcCC
Q psy7108          47 EGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLD----GQLIMFDVES  122 (703)
Q Consensus        47 ~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~d----g~I~vwd~~~  122 (703)
                      ...+..++|.+  +|++.++-..++.|..|+.+++...............+++++||+++++...+    +.+...+..+
T Consensus        39 ~~~lEG~~~D~--~G~Ly~~D~~~g~I~ri~p~g~~~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~  116 (319)
T d2dg1a1          39 GLQLEGLNFDR--QGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENG  116 (319)
T ss_dssp             CCCEEEEEECT--TSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTS
T ss_pred             CcCcEeCEECC--CCCEEEEECCCCEEEEEECCCCeEEEEEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCCC
Confidence            34457899999  99988877788889888887765555555666778999999999987765432    3455555555


Q ss_pred             CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec------CCcEEEEECCCCceEEEEEeccC
Q psy7108         123 AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ------SKYICIYSSREGILLKKFTITQN  196 (703)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~------dg~I~lwD~~~~~~~~~~~~~~~  196 (703)
                      +...........                  ......+++.++|++.++...      .+.+..++...+.. ..+.... 
T Consensus       117 ~~~~~~~~~~~~------------------~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~~~-~~~~~~~-  176 (319)
T d2dg1a1         117 DNLQDIIEDLST------------------AYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTV-TPIIQNI-  176 (319)
T ss_dssp             CSCEEEECSSSS------------------CCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCE-EEEEEEE-
T ss_pred             ceeeeeccCCCc------------------ccCCcceeEEeccceeecccccccccCcceeEEEeccccee-EEEeecc-
Confidence            544433322111                  125788999999987766432      13355565544332 2221111 


Q ss_pred             CccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC-cccee-------ecCCccceEEEEEcCCCCEEEE
Q psy7108         197 KSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG-DMAAR-------VLKPEVRVFCVKFSPTGQAWVA  268 (703)
Q Consensus       197 ~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~-~~~~~-------~~~h~~~V~~l~~spdg~~l~s  268 (703)
                             ...+.++|+|+++.++++....     +.|..||+... .....       ..........+++.++|+..++
T Consensus       177 -------~~pnGia~s~dg~~lyvad~~~-----~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va  244 (319)
T d2dg1a1         177 -------SVANGIALSTDEKVLWVTETTA-----NRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVA  244 (319)
T ss_dssp             -------SSEEEEEECTTSSEEEEEEGGG-----TEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEE
T ss_pred             -------ceeeeeeeccccceEEEecccC-----CceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEE
Confidence                   1346799999999776654432     36777776532 11111       1112233668999999998887


Q ss_pred             EeCCC-EEEEEcCCCceecc
Q psy7108         269 ATTEG-VHIYSLDSGYVFDP  287 (703)
Q Consensus       269 ~s~Dg-v~iwd~~~~~~~~~  287 (703)
                      ....+ |.+|+- .|+.+..
T Consensus       245 ~~~~g~V~~~~p-~G~~l~~  263 (319)
T d2dg1a1         245 MYGQGRVLVFNK-RGYPIGQ  263 (319)
T ss_dssp             EETTTEEEEECT-TSCEEEE
T ss_pred             EcCCCEEEEECC-CCcEEEE
Confidence            77777 999995 5665443

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=98.37  E-value=3.2e-05  Score=77.27  Aligned_cols=200  Identities=11%  Similarity=0.070  Sum_probs=123.2

Q ss_pred             eEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCC----cEEEEEEecCCCEEEEEEC--------------
Q psy7108          50 VSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLS----DALCVAYKPDGTEIVVATL--------------  111 (703)
Q Consensus        50 V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~----~V~~v~~spdg~~las~s~--------------  111 (703)
                      -..++|.+  +++.++.++..+.+...+.+............+    ....+++.++|...++-..              
T Consensus        73 P~Gl~~~~--dg~~l~vad~~~~i~~~~~~g~~~~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~  150 (314)
T d1pjxa_          73 PAGCQCDR--DANQLFVADMRLGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQE  150 (314)
T ss_dssp             EEEEEECS--SSSEEEEEETTTEEEEEETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSS
T ss_pred             ceeEEEeC--CCCEEEEEECCCeEEEEeCCCcEEEEEeccccccccCCCcEEEECCCCCEEEecCccCcccccccceecc
Confidence            56799999  999888887777788888765422211111111    3577999999987776422              


Q ss_pred             -CCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCC----EE-EEEecCCcEEEEECCCC
Q psy7108         112 -DGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGS----CI-LAAGQSKYICIYSSREG  185 (703)
Q Consensus       112 -dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~----~l-~s~s~dg~I~lwD~~~~  185 (703)
                       +|.|..++.+ ++.......-.                     .-+.++|+|+++    .| ++-+..+.|..||+...
T Consensus       151 ~~G~v~~~~~d-g~~~~~~~~~~---------------------~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~  208 (314)
T d1pjxa_         151 KFGSIYCFTTD-GQMIQVDTAFQ---------------------FPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGP  208 (314)
T ss_dssp             SCEEEEEECTT-SCEEEEEEEES---------------------SEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEET
T ss_pred             CCceEEEEeec-CceeEeeCCcc---------------------eeeeeEECCCCCcceeEEEEEeecccceEEeeccCc
Confidence             2344444432 33332222211                     346789998764    34 44466788999987644


Q ss_pred             ceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCE
Q psy7108         186 ILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQA  265 (703)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~  265 (703)
                      ..+...+...... .........+++..+|+.+++....      ..|.+||.+.++....+..+...+++++|.||++.
T Consensus       209 g~~~~~~~~~~~~-~~~~~~pdGiavD~~GnlyVa~~~~------g~I~~~dp~~g~~~~~i~~p~~~~t~~afg~d~~~  281 (314)
T d1pjxa_         209 AKIENKKVWGHIP-GTHEGGADGMDFDEDNNLLVANWGS------SHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKT  281 (314)
T ss_dssp             TEEEEEEEEEECC-CCSSCEEEEEEEBTTCCEEEEEETT------TEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSE
T ss_pred             cccceeeEEEEcc-ccccccceeeEEecCCcEEEEEcCC------CEEEEEeCCCCEEEEEEECCCCCEEEEEEeCCCCE
Confidence            3332211100000 0001134568999999976665443      27999998888777666666677899999999986


Q ss_pred             E-EEEeCCC-EEEEEcC
Q psy7108         266 W-VAATTEG-VHIYSLD  280 (703)
Q Consensus       266 l-~s~s~Dg-v~iwd~~  280 (703)
                      | ++.+.++ |..+++.
T Consensus       282 lyVt~~~~g~i~~~~~~  298 (314)
T d1pjxa_         282 IFVTEHENNAVWKFEWQ  298 (314)
T ss_dssp             EEEEETTTTEEEEEECS
T ss_pred             EEEEECCCCcEEEEECC
Confidence            6 5555566 7666654

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.33  E-value=9.3e-06  Score=78.91  Aligned_cols=193  Identities=11%  Similarity=0.038  Sum_probs=119.7

Q ss_pred             CeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEE
Q psy7108          49 PVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGS  128 (703)
Q Consensus        49 ~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~  128 (703)
                      ....+++++  ++.++++....+.+++++-.+... ...........++++.++++.+++-..+..+..++........ 
T Consensus        58 ~p~gvav~~--~g~i~v~d~~~~~i~~~~~~~~~~-~~~~~~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~-  133 (260)
T d1rwia_          58 QPQGLAVDG--AGTVYVTDFNNRVVTLAAGSNNQT-VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTV-  133 (260)
T ss_dssp             SCCCEEECT--TCCEEEEETTTEEEEECTTCSCCE-ECCCCSCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEE-
T ss_pred             CceEEEEcC--CCCEEEeeeeeceeeeeeecccee-eeeeeeeeecccccccccceeEeeccccccccccccccceeee-
Confidence            356889999  899888877766676665433322 2222234567899999999887776666677777765443221 


Q ss_pred             EeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCcccccccccee
Q psy7108         129 VEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINR  208 (703)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~  208 (703)
                      ... ..                  ......++++++|+.+++...++.|..+|....... .+...       .......
T Consensus       134 ~~~-~~------------------~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~~~~-~~~~~-------~~~~p~g  186 (260)
T d1rwia_         134 LPF-TG------------------LNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQV-VLPFT-------DITAPWG  186 (260)
T ss_dssp             CCC-CS------------------CCSCCEEEECTTCCEEEEEGGGTEEEEECTTTCCEE-ECCCS-------SCCSEEE
T ss_pred             eee-cc------------------cCCcceeeecCCCCEeeeccccccccccccccceee-eeecc-------ccCCCcc
Confidence            111 00                  113467899999998888788888999998755332 22111       1124567


Q ss_pred             eeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEE
Q psy7108         209 RKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYS  278 (703)
Q Consensus       209 ~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd  278 (703)
                      +++.++|..+++....+      .|..++.............-....+++++++|+.+++-..++ |+.++
T Consensus       187 i~~d~~g~l~vsd~~~~------~i~~~~~~~~~~~~~~~~~~~~P~~i~~d~~g~l~vad~~~~rI~~i~  251 (260)
T d1rwia_         187 IAVDEAGTVYVTEHNTN------QVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLT  251 (260)
T ss_dssp             EEECTTCCEEEEETTTT------EEEEECTTCSCCEECCCCSCCCEEEEEECTTCCEEEEEGGGTEEEEEC
T ss_pred             ceeeeeeeeeeeecCCC------EEEEEeCCCCeEEEEccCCCCCeEEEEEeCCCCEEEEECCCCEEEEEe
Confidence            89999998766655442      555555443322211122234578999999998776655555 55444

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.32  E-value=1e-05  Score=78.70  Aligned_cols=207  Identities=9%  Similarity=0.094  Sum_probs=115.8

Q ss_pred             EEcCCCC--CCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEEC-C-----CeEEEEEcCCCcE
Q psy7108          54 EFSPVLS--STGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATL-D-----GQLIMFDVESAAQ  125 (703)
Q Consensus        54 ~~sp~~d--g~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~-d-----g~I~vwd~~~~~~  125 (703)
                      ..+|  |  |+.+|..+. |.|.+.|+.+++ ...+..+.+.+...+|||||+.||.... +     ..|.+++..+++.
T Consensus         5 ~~sP--di~G~~v~f~~~-~dl~~~d~~~g~-~~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~   80 (281)
T d1k32a2           5 LLNP--DIHGDRIIFVCC-DDLWEHDLKSGS-TRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEI   80 (281)
T ss_dssp             CEEE--EEETTEEEEEET-TEEEEEETTTCC-EEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEE
T ss_pred             ccCC--CCCCCEEEEEeC-CcEEEEECCCCC-EEEEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCce
Confidence            4578  8  999987754 567777887764 5667777788999999999999987643 2     2488888888776


Q ss_pred             EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC------CcEEEEECCCCceEEEEEe------
Q psy7108         126 VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS------KYICIYSSREGILLKKFTI------  193 (703)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d------g~I~lwD~~~~~~~~~~~~------  193 (703)
                      .........              ............|+|||+.|+.....      ..+...+...+........      
T Consensus        81 ~~lt~~~~~--------------~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (281)
T d1k32a2          81 KRITYFSGK--------------STGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHIL  146 (281)
T ss_dssp             EECCCCCEE--------------EETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEE
T ss_pred             EEeeecCCC--------------ccCccccccccccCCCCCEEEEEEccCCCccceeeeeecCCCceeEEecCCccceee
Confidence            543221110              00011134678899999988864321      2244555443322111000      


Q ss_pred             -----------ccC-Cc----cc-------------------cccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCC
Q psy7108         194 -----------TQN-KS----LD-------------------GINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGV  238 (703)
Q Consensus       194 -----------~~~-~~----~~-------------------~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~  238 (703)
                                 ... ..    ..                   ..........++++  .++....   ..+...|.++|+
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---~~~~~~l~~~d~  221 (281)
T d1k32a2         147 FADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGH--RIYFITD---IDGFGQIYSTDL  221 (281)
T ss_dssp             EETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETT--EEEEEEC---TTSSCEEEEEET
T ss_pred             ecCCCeEEEeeccccceeeeeccCCcceeeeeccccceeeccCCccccceeeeecc--ccceecc---cccccceEEEeC
Confidence                       000 00    00                   00001111222222  2222221   122346778888


Q ss_pred             CCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceec
Q psy7108         239 KKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFD  286 (703)
Q Consensus       239 ~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~  286 (703)
                      .+++...........+  ..|||||+.|+... ++ +.++|+++++...
T Consensus       222 ~g~~~~~lt~~~~~~~--~~~SpDG~~I~f~~-~~~l~~~d~~~g~~~~  267 (281)
T d1k32a2         222 DGKDLRKHTSFTDYYP--RHLNTDGRRILFSK-GGSIYIFNPDTEKIEK  267 (281)
T ss_dssp             TSCSCEECCCCCSSCE--EEEEESSSCEEEEE-TTEEEEECTTTCCEEE
T ss_pred             CCCceEEeecCCCccc--ccCcCCCCEEEEEe-CCEEEEEECCCCCEEE
Confidence            7766543333333333  46899999987655 45 9999999887643

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=98.30  E-value=9.8e-05  Score=73.09  Aligned_cols=230  Identities=11%  Similarity=-0.000  Sum_probs=137.9

Q ss_pred             ccCCceEEecCC--ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCce-eEEEe--cC
Q psy7108          16 HEGGNVVLKLPG--VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDT-QHETI--QL   90 (703)
Q Consensus        16 ~~~~~~~i~~~~--v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~-~~~~~--~~   90 (703)
                      .+|..++....+  +..++.+|+.   ..+......+.+++|+|  +|+++++...++.+..|+...... .....  ..
T Consensus        37 pdG~l~vt~~~~~~I~~i~p~g~~---~~~~~~~~~~~gla~~~--dG~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~  111 (302)
T d2p4oa1          37 PDGTIFVTNHEVGEIVSITPDGNQ---QIHATVEGKVSGLAFTS--NGDLVATGWNADSIPVVSLVKSDGTVETLLTLPD  111 (302)
T ss_dssp             TTSCEEEEETTTTEEEEECTTCCE---EEEEECSSEEEEEEECT--TSCEEEEEECTTSCEEEEEECTTSCEEEEEECTT
T ss_pred             CCCCEEEEeCCCCEEEEEeCCCCE---EEEEcCCCCcceEEEcC--CCCeEEEecCCceEEEEEecccccceeeccccCC
Confidence            344444343433  3335666764   35556678899999999  999999988888888887654332 22222  24


Q ss_pred             CCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEE
Q psy7108          91 LSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILA  170 (703)
Q Consensus        91 ~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s  170 (703)
                      ......+++.++|+++++.+.++.+..+|..++.............          ............++++. +..+++
T Consensus       112 ~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~ngi~~~~-~~l~~~  180 (302)
T d2p4oa1         112 AIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLAR----------SNSESVFPAANGLKRFG-NFLYVS  180 (302)
T ss_dssp             CSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSC----------SSTTCCSCSEEEEEEET-TEEEEE
T ss_pred             ccccceeEEccCCCEEeeccccccceeeeccCCcceeEecCCccce----------eeccCcccccccccccC-Cceeee
Confidence            4568899999999988888888999999988775443333221100          00001112455666654 234445


Q ss_pred             EecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCc-cceeecC
Q psy7108         171 AGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGD-MAARVLK  249 (703)
Q Consensus       171 ~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~-~~~~~~~  249 (703)
                      .+..+.|..++..............      .......++++++|+.+++...++      .|..++..... .+.....
T Consensus       181 ~~~~~~i~~~~~~~~~~~~~~~~~~------~~~~pdgia~d~dG~l~va~~~~~------~V~~i~p~G~~~~~~~~~~  248 (302)
T d2p4oa1         181 NTEKMLLLRIPVDSTDKPGEPEIFV------EQTNIDDFAFDVEGNLYGATHIYN------SVVRIAPDRSTTIIAQAEQ  248 (302)
T ss_dssp             ETTTTEEEEEEBCTTSCBCCCEEEE------ESCCCSSEEEBTTCCEEEECBTTC------CEEEECTTCCEEEEECGGG
T ss_pred             cCCCCeEEecccccccccccccccc------CCCCCcceEECCCCCEEEEEcCCC------cEEEECCCCCEEEEEecCC
Confidence            5677888888877543221111000      012446799999998666554432      56666654321 1222223


Q ss_pred             CccceEEEEE---cCCCCEEEEEeCCC
Q psy7108         250 PEVRVFCVKF---SPTGQAWVAATTEG  273 (703)
Q Consensus       250 h~~~V~~l~~---spdg~~l~s~s~Dg  273 (703)
                      .-...++++|   ++|++.|..++..+
T Consensus       249 ~~~~pt~vafg~~~~D~~~Lyvtt~~g  275 (302)
T d2p4oa1         249 GVIGSTAVAFGQTEGDCTAIYVVTNGG  275 (302)
T ss_dssp             TCTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred             CCCCceEEEEcCCCCCCCEEEEECCCC
Confidence            3455889999   77888887665543

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.29  E-value=4.4e-06  Score=88.72  Aligned_cols=212  Identities=10%  Similarity=0.095  Sum_probs=128.7

Q ss_pred             EEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEec---CCCcEEEEEEecCCCEEEEEEC---------CCeEEEEEc
Q psy7108          53 IEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQ---LLSDALCVAYKPDGTEIVVATL---------DGQLIMFDV  120 (703)
Q Consensus        53 l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~---~~~~V~~v~~spdg~~las~s~---------dg~I~vwd~  120 (703)
                      ..|.+  ++.++.. ..||.+.+||+.+++....+..   ..-.+....||||+++++....         .+.+.++|+
T Consensus        22 ~~W~~--~~~~~~~-~~~g~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~   98 (465)
T d1xfda1          22 AKWIS--DTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKI   98 (465)
T ss_dssp             CCBSS--SSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEES
T ss_pred             CEEeC--CCcEEEE-eCCCcEEEEECCCCCEEEEEcCccccccccceeEECCCCCeEEEEEcccceeEeeccccEEEEEc
Confidence            36888  7766543 5678999999987754322222   1235677889999999887643         467899999


Q ss_pred             CCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEe-ccCCcc
Q psy7108         121 ESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTI-TQNKSL  199 (703)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~-~~~~~~  199 (703)
                      .+++.........                  ....+....|||||+.+|... ++.|.+.+..++..++.... ......
T Consensus        99 ~~~~~~~l~~~~~------------------~~~~l~~~~wSPDG~~iafv~-~~nl~~~~~~~~~~~~lt~~g~~~~i~  159 (465)
T d1xfda1          99 PHGDPQSLDPPEV------------------SNAKLQYAGWGPKGQQLIFIF-ENNIYYCAHVGKQAIRVVSTGKEGVIY  159 (465)
T ss_dssp             SSCCCEECCCTTC------------------CSCCCSBCCBCSSTTCEEEEE-TTEEEEESSSSSCCEEEECCCBTTTEE
T ss_pred             cCCceeeccCccC------------------CccccceeeeccCCceEEEEe-cceEEEEecCCCceEEEecccCcceee
Confidence            8887543322111                  112455678999999998765 57799999887766554332 112122


Q ss_pred             cccccc---------ceeeeeccCCCEEEEEcccCCCCC----------------------------eeEEECCCCCCCc
Q psy7108         200 DGINDF---------INRRKMTEFGNVSLIETRETHEGG----------------------------NVVLKLPGVKKGD  242 (703)
Q Consensus       200 ~~~~~~---------v~~~~~spdg~~l~~~~~~~~~~~----------------------------~~~i~iwd~~~~~  242 (703)
                      .|..++         -..+.|||||+.+++...+...-.                            ...+.++|+.++.
T Consensus       160 nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~~~D~s~V~~~~~~~~~~~~~p~~~~~~Yp~~G~~np~~~l~v~d~~~~~  239 (465)
T d1xfda1         160 NGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPT  239 (465)
T ss_dssp             EEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSC
T ss_pred             ccccchhhhhhhccccceEEECCCCCeEEEEEecccccceeecccccccccceeeeeeccccCCCCCceeEEEEecCCCc
Confidence            222221         135679999999998654322110                            1234455554443


Q ss_pred             cceeec------CCccceEEEEEcCCCCEEEEEeC-CC----EEEEEcCCCceec
Q psy7108         243 MAARVL------KPEVRVFCVKFSPTGQAWVAATT-EG----VHIYSLDSGYVFD  286 (703)
Q Consensus       243 ~~~~~~------~h~~~V~~l~~spdg~~l~s~s~-Dg----v~iwd~~~~~~~~  286 (703)
                      ......      ..+.-+..+.|+|+++.++...+ +.    +.++|..++++..
T Consensus       240 ~~~~~~~~~~~~~~~~y~~~~~W~~d~~~~~~~~nR~q~~~~i~~~d~~tg~~~~  294 (465)
T d1xfda1         240 HDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTK  294 (465)
T ss_dssp             CCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEE
T ss_pred             EEEEEeccCcCccccceeeeeEEcCCCeEEEEEEccccccceEEEEcCCCCcEEE
Confidence            221111      11223678899999987655433 32    6788888887643

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=98.25  E-value=0.00012  Score=72.88  Aligned_cols=216  Identities=11%  Similarity=0.096  Sum_probs=128.3

Q ss_pred             eEEEEEcCCCCCCEEEEEeC-------CCcEEEEEcCCCceeEEEec----CCCcEEEEEEecCCCEEEEEECCCeEEEE
Q psy7108          50 VSCIEFSPVLSSTGMVSASW-------DKTVKLWNAVETDTQHETIQ----LLSDALCVAYKPDGTEIVVATLDGQLIMF  118 (703)
Q Consensus        50 V~~l~~sp~~dg~~L~sgs~-------Dg~V~iWd~~~~~~~~~~~~----~~~~V~~v~~spdg~~las~s~dg~I~vw  118 (703)
                      .-+++|.|  +|+++++...       +|+|..||..++........    ..+....++|.++++.++++...+.|...
T Consensus        20 ~EGpa~d~--dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~~l~vad~~~~i~~~   97 (314)
T d1pjxa_          20 AEGPVFDK--NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVV   97 (314)
T ss_dssp             CEEEEECT--TSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEE
T ss_pred             CeEeEEeC--CCCEEEEECccccccccCCEEEEEECCCCcEEEEECCccccCCCcceeEEEeCCCCEEEEEECCCeEEEE
Confidence            46689999  9998876532       46688888877653322221    12336789999999988888877889889


Q ss_pred             EcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec---------------CCcEEEEECC
Q psy7108         119 DVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ---------------SKYICIYSSR  183 (703)
Q Consensus       119 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~---------------dg~I~lwD~~  183 (703)
                      |.+.+... .+.....  ..             .-...+.+++.++|+..++-..               +|.|..++..
T Consensus        98 ~~~g~~~~-~~~~~~~--g~-------------~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~d  161 (314)
T d1pjxa_          98 QTDGTFEE-IAKKDSE--GR-------------RMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD  161 (314)
T ss_dssp             ETTSCEEE-CCSBCTT--SC-------------BCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT
T ss_pred             eCCCcEEE-EEecccc--cc-------------ccCCCcEEEECCCCCEEEecCccCcccccccceeccCCceEEEEeec
Confidence            87755332 1111110  00             0113567899999988776422               2345545433


Q ss_pred             CCceEEEEEeccCCccccccccceeeeeccCCC----EEEEEcccCCCCCeeEEECCCCCCCccce------eecC-Ccc
Q psy7108         184 EGILLKKFTITQNKSLDGINDFINRRKMTEFGN----VSLIETRETHEGGNVVLKLPGVKKGDMAA------RVLK-PEV  252 (703)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~----~l~~~~~~~~~~~~~~i~iwd~~~~~~~~------~~~~-h~~  252 (703)
                       ++....... .        ..-+.++|+|++.    .++++....     ..|..+|+.....+.      .+.. ...
T Consensus       162 -g~~~~~~~~-~--------~~pNGi~~~~d~d~~~~~lyv~d~~~-----~~i~~~d~~~~g~~~~~~~~~~~~~~~~~  226 (314)
T d1pjxa_         162 -GQMIQVDTA-F--------QFPNGIAVRHMNDGRPYQLIVAETPT-----KKLWSYDIKGPAKIENKKVWGHIPGTHEG  226 (314)
T ss_dssp             -SCEEEEEEE-E--------SSEEEEEEEECTTSCEEEEEEEETTT-----TEEEEEEEEETTEEEEEEEEEECCCCSSC
T ss_pred             -CceeEeeCC-c--------ceeeeeEECCCCCcceeEEEEEeecc-----cceEEeeccCccccceeeEEEEccccccc
Confidence             333222211 1        1336788998875    344433221     367666654321111      1111 223


Q ss_pred             ceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecce------eeeEEEccch
Q psy7108         253 RVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPF------LLDISITPQS  298 (703)
Q Consensus       253 ~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~------~~~~~~spd~  298 (703)
                      ....+++.++|+..++....+ |.+|+.++++....+      ..+++|.||+
T Consensus       227 ~pdGiavD~~GnlyVa~~~~g~I~~~dp~~g~~~~~i~~p~~~~t~~afg~d~  279 (314)
T d1pjxa_         227 GADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQT  279 (314)
T ss_dssp             EEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTS
T ss_pred             cceeeEEecCCcEEEEEcCCCEEEEEeCCCCEEEEEEECCCCCEEEEEEeCCC
Confidence            466899999999877776666 999998776543222      2568999987

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.20  E-value=0.00056  Score=66.53  Aligned_cols=228  Identities=13%  Similarity=0.174  Sum_probs=144.9

Q ss_pred             CeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecC------CCcEEEEEEecCCC-EEEEE-ECCCeEEEEEc
Q psy7108          49 PVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQL------LSDALCVAYKPDGT-EIVVA-TLDGQLIMFDV  120 (703)
Q Consensus        49 ~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~------~~~V~~v~~spdg~-~las~-s~dg~I~vwd~  120 (703)
                      .-..++++|  +++.+++-...+.|++||.+ +..+......      ......+++.++.. .+++. +.++.|..++.
T Consensus        24 ~P~gvavd~--dg~i~VaD~~n~rI~v~d~~-G~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~  100 (279)
T d1q7fa_          24 EPSGVAVNA--QNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQ  100 (279)
T ss_dssp             CEEEEEECT--TCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECT
T ss_pred             CccEEEEcC--CCCEEEEECCCCEEEEEeCC-CCEEEEecccCCCcccccccccccccccccccceeccCCccccccccc
Confidence            357899999  99988887778899999964 4344333221      11345666666544 33333 34557777775


Q ss_pred             CCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccc
Q psy7108         121 ESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLD  200 (703)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~  200 (703)
                       .++....+....                   ......+++.++|+.+++....+.+.++|.. ++.+.++....     
T Consensus       101 -~g~~~~~~~~~~-------------------~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~-g~~~~~~g~~~-----  154 (279)
T d1q7fa_         101 -YGQFVRKFGATI-------------------LQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSK-----  154 (279)
T ss_dssp             -TSCEEEEECTTT-------------------CSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTT-----
T ss_pred             -cccceeecCCCc-------------------ccccceeccccCCcEEEEeeccceeeEeccC-Cceeecccccc-----
Confidence             455555553321                   1256789999999988887777788888854 56666654322     


Q ss_pred             cccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeec--CCccceEEEEEcCCCCEEEEEeC-CC-EEE
Q psy7108         201 GINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL--KPEVRVFCVKFSPTGQAWVAATT-EG-VHI  276 (703)
Q Consensus       201 ~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~--~h~~~V~~l~~spdg~~l~s~s~-Dg-v~i  276 (703)
                       .......+++.++|..+++....      ..|++||.. ++.+..+.  +......+++++|+|+.+++-+. ++ |.+
T Consensus       155 -~~~~~~~i~~d~~g~i~v~d~~~------~~V~~~d~~-G~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~  226 (279)
T d1q7fa_         155 -HLEFPNGVVVNDKQEIFISDNRA------HCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTI  226 (279)
T ss_dssp             -TCSSEEEEEECSSSEEEEEEGGG------TEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEE
T ss_pred             -cccccceeeeccceeEEeeeccc------cceeeeecC-CceeeeecccccccCCcccccccCCeEEEEECCCCcEEEE
Confidence             22356678899999877665544      378888754 44444442  23445789999999997776554 34 888


Q ss_pred             EEcCCCceecce--------eeeEEEccchhhhHhhcCCcceEEEEEEec
Q psy7108         277 YSLDSGYVFDPF--------LLDISITPQSVKEALADKDYAKALMMSLKL  318 (703)
Q Consensus       277 wd~~~~~~~~~~--------~~~~~~spd~~~~~l~sg~~~~~l~la~~l  318 (703)
                      |+. +|+....+        ...+++.|++  .++.+. .+..+.+ ++.
T Consensus       227 f~~-~G~~~~~~~~~~~~~~p~~vav~~dG--~l~V~~-~n~~v~~-fr~  271 (279)
T d1q7fa_         227 FTQ-DGQLISALESKVKHAQCFDVALMDDG--SVVLAS-KDYRLYI-YRY  271 (279)
T ss_dssp             ECT-TSCEEEEEEESSCCSCEEEEEEETTT--EEEEEE-TTTEEEE-EEC
T ss_pred             ECC-CCCEEEEEeCCCCCCCEeEEEEeCCC--cEEEEe-CCCeEEE-EEe
Confidence            885 45543322        3568888988  333332 4556665 543

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.14  E-value=0.00075  Score=67.04  Aligned_cols=222  Identities=10%  Similarity=0.083  Sum_probs=126.2

Q ss_pred             cCCceEEecCC--ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCC--CcEEEEEc--CCCceeEEEecC
Q psy7108          17 EGGNVVLKLPG--VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWD--KTVKLWNA--VETDTQHETIQL   90 (703)
Q Consensus        17 ~~~~~~i~~~~--v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~D--g~V~iWd~--~~~~~~~~~~~~   90 (703)
                      .|..+++.+.+  +..++..++.. ...+.........+++++  +|+++++...+  ....++.+  ... ........
T Consensus        50 ~G~Ly~~D~~~g~I~ri~p~g~~~-~~~~~~~~~~p~gla~~~--dG~l~va~~~~~~~~~~i~~~~~~~~-~~~~~~~~  125 (319)
T d2dg1a1          50 QGQLFLLDVFEGNIFKINPETKEI-KRPFVSHKANPAAIKIHK--DGRLFVCYLGDFKSTGGIFAATENGD-NLQDIIED  125 (319)
T ss_dssp             TSCEEEEETTTCEEEEECTTTCCE-EEEEECSSSSEEEEEECT--TSCEEEEECTTSSSCCEEEEECTTSC-SCEEEECS
T ss_pred             CCCEEEEECCCCEEEEEECCCCeE-EEEEeCCCCCeeEEEECC--CCCEEEEecCCCccceeEEEEcCCCc-eeeeeccC
Confidence            44434444333  33355555432 033444556788999999  99988876443  23334433  333 22233322


Q ss_pred             ---CCcEEEEEEecCCCEEEEEEC------CCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEE
Q psy7108          91 ---LSDALCVAYKPDGTEIVVATL------DGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCY  161 (703)
Q Consensus        91 ---~~~V~~v~~spdg~~las~s~------dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~  161 (703)
                         ......+++.++|++.++...      .+.+..++.+.+........-.                     ..+.++|
T Consensus       126 ~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~~~~~~~~~~~---------------------~pnGia~  184 (319)
T d2dg1a1         126 LSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNIS---------------------VANGIAL  184 (319)
T ss_dssp             SSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEES---------------------SEEEEEE
T ss_pred             CCcccCCcceeEEeccceeecccccccccCcceeEEEecccceeEEEeeccc---------------------eeeeeee
Confidence               335788999999986665422      1235555554433322222211                     4578999


Q ss_pred             cCCCCEEEEE-ecCCcEEEEECCCC-ceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC
Q psy7108         162 SADGSCILAA-GQSKYICIYSSREG-ILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK  239 (703)
Q Consensus       162 spdg~~l~s~-s~dg~I~lwD~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~  239 (703)
                      +||++.|..+ +..+.|..||+... ...............+ ......+++.++|+..++....+      .|.++|. 
T Consensus       185 s~dg~~lyvad~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~-~~~PdGl~vD~~G~l~Va~~~~g------~V~~~~p-  256 (319)
T d2dg1a1         185 STDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTG-HEGPDSCCIDSDDNLYVAMYGQG------RVLVFNK-  256 (319)
T ss_dssp             CTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCS-SSEEEEEEEBTTCCEEEEEETTT------EEEEECT-
T ss_pred             ccccceEEEecccCCceEEEEEcCCCceeccccceeeeccCC-ccceeeeeEcCCCCEEEEEcCCC------EEEEECC-
Confidence            9999877554 56788999998642 2222111110000000 01235689999999776655443      7899995 


Q ss_pred             CCccceeecC------CccceEEEEEcCCCCEEEEEeC
Q psy7108         240 KGDMAARVLK------PEVRVFCVKFSPTGQAWVAATT  271 (703)
Q Consensus       240 ~~~~~~~~~~------h~~~V~~l~~spdg~~l~s~s~  271 (703)
                      .|+.+..+.-      +...+++++|.|++..+++.+.
T Consensus       257 ~G~~l~~i~~P~~~~~~~~~~~~~~~~~~~~~~~~t~~  294 (319)
T d2dg1a1         257 RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSN  294 (319)
T ss_dssp             TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEE
T ss_pred             CCcEEEEEeCCCcCCCcCceeeeEEEeCCCCEEEEEcC
Confidence            5776665543      3345789999998887765543

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.10  E-value=0.00018  Score=75.94  Aligned_cols=246  Identities=10%  Similarity=0.143  Sum_probs=129.1

Q ss_pred             CCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecC-CCcE-----------------EEEEEecCCCEEE
Q psy7108          46 HEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQL-LSDA-----------------LCVAYKPDGTEIV  107 (703)
Q Consensus        46 H~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~-~~~V-----------------~~v~~spdg~~la  107 (703)
                      ....+....|||  ||+.||... ++.+.+.+..++...+.+... .+.|                 .++.|||||+.||
T Consensus       112 ~~~~l~~~~wSP--DG~~iafv~-~~nl~~~~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~ia  188 (465)
T d1xfda1         112 SNAKLQYAGWGP--KGQQLIFIF-ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLA  188 (465)
T ss_dssp             CSCCCSBCCBCS--STTCEEEEE-TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEE
T ss_pred             Cccccceeeecc--CCceEEEEe-cceEEEEecCCCceEEEecccCcceeeccccchhhhhhhccccceEEECCCCCeEE
Confidence            345566789999  999999876 467888887666544333221 1112                 4677999999999


Q ss_pred             EEECC-CeEEEEEcCC--C---cEEEEEecccc-------------CCCCCCCC-ccchhhcccCCccEEEEEEcCCCCE
Q psy7108         108 VATLD-GQLIMFDVES--A---AQVGSVEARRD-------------LDSGRLDT-DLVTREQSLKAKAVSTVCYSADGSC  167 (703)
Q Consensus       108 s~s~d-g~I~vwd~~~--~---~~~~~~~~~~~-------------~~~~~~~~-~~~~~~~~~~~~~V~~i~~spdg~~  167 (703)
                      ....| ..|..+.+..  +   .....+.-...             +..+.... .............+..+.|+|+++.
T Consensus       189 f~~~D~s~V~~~~~~~~~~~~~p~~~~~~Yp~~G~~np~~~l~v~d~~~~~~~~~~~~~~~~~~~~~y~~~~~W~~d~~~  268 (465)
T d1xfda1         189 YAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKV  268 (465)
T ss_dssp             EEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEE
T ss_pred             EEEecccccceeecccccccccceeeeeeccccCCCCCceeEEEEecCCCcEEEEEeccCcCccccceeeeeEEcCCCeE
Confidence            87643 4455544321  1   01111111000             00000000 0000001112335788999999986


Q ss_pred             EEEEe-cC---CcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEE--c-ccCCCCCeeEEECCCC--
Q psy7108         168 ILAAG-QS---KYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIE--T-RETHEGGNVVLKLPGV--  238 (703)
Q Consensus       168 l~s~s-~d---g~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~--~-~~~~~~~~~~i~iwd~--  238 (703)
                      ++... ++   ..+.++|..++++...+......-+..   .-....|+++|+.++..  . .++ -+.-..+.+...  
T Consensus       269 ~~~~~nR~q~~~~i~~~d~~tg~~~~~~~e~~~~wv~~---~~~~p~~~~dg~~~~fi~~se~~g-~~~ly~~~~~~~~~  344 (465)
T d1xfda1         269 AVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHR---QNEEPVFSKDGRKFFFIRAIPQGG-RGKFYHITVSSSQP  344 (465)
T ss_dssp             EEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCC---CCCCCEECTTSCSEEEEEEECCSS-SSCEEEEEEECSSC
T ss_pred             EEEEEccccccceEEEEcCCCCcEEEEEEEcCCceEec---cCCceeEccCCCeeEEEEeeeecc-cCceEEEEeccccc
Confidence            66542 22   258899999998776655333211111   12356899999865432  2 222 111122222211  


Q ss_pred             -CCCccceeecCCccceEEE-EEcCCCCEE-EEEeCCC---EEEEEcC--CCceecc---------eeeeEEEccch
Q psy7108         239 -KKGDMAARVLKPEVRVFCV-KFSPTGQAW-VAATTEG---VHIYSLD--SGYVFDP---------FLLDISITPQS  298 (703)
Q Consensus       239 -~~~~~~~~~~~h~~~V~~l-~~spdg~~l-~s~s~Dg---v~iwd~~--~~~~~~~---------~~~~~~~spd~  298 (703)
                       ..+.....+......|..+ +|+++++.+ +++..++   -++|.+.  .+.....         -..++.|||++
T Consensus       345 ~~~~~~~~~LT~G~w~V~~i~~~d~~~~~vyF~a~~~~p~~~hly~v~l~g~~~~~~lt~~~~~~~~~~~~~~S~~~  421 (465)
T d1xfda1         345 NSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSM  421 (465)
T ss_dssp             CSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTS
T ss_pred             cCCCceeEEeccCCceEEEEEEEcCCCCEEEEEEeCCCCCceEEEEEECCCCCcceeeccccCCCCCEEEEEECCCC
Confidence             1233344455556667765 689988877 4555544   4566654  2221111         11468899988

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.04  E-value=0.0017  Score=63.51  Aligned_cols=202  Identities=15%  Similarity=0.112  Sum_probs=127.7

Q ss_pred             EEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEe
Q psy7108          51 SCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVE  130 (703)
Q Consensus        51 ~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~  130 (703)
                      -+..|++. ++.+..+=-..+.|..||..++.  .........+.++++.++|.++++ +. ..+..+|..+++......
T Consensus        21 Egp~wd~~-~~~l~wvDi~~~~I~r~d~~~g~--~~~~~~~~~~~~i~~~~dg~l~va-~~-~gl~~~d~~tg~~~~l~~   95 (295)
T d2ghsa1          21 EGPTFDPA-SGTAWWFNILERELHELHLASGR--KTVHALPFMGSALAKISDSKQLIA-SD-DGLFLRDTATGVLTLHAE   95 (295)
T ss_dssp             EEEEEETT-TTEEEEEEGGGTEEEEEETTTTE--EEEEECSSCEEEEEEEETTEEEEE-ET-TEEEEEETTTCCEEEEEC
T ss_pred             eCCeEECC-CCEEEEEECCCCEEEEEECCCCe--EEEEECCCCcEEEEEecCCCEEEE-Ee-CccEEeecccceeeEEee
Confidence            35678872 34444444466789999988774  334556678899999999877665 44 469999999887654332


Q ss_pred             ccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec----CCcEEEEECCCCceEEEEEeccCCccccccccc
Q psy7108         131 ARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ----SKYICIYSSREGILLKKFTITQNKSLDGINDFI  206 (703)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~----dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v  206 (703)
                      ....                .....++.+.+.|+|++.++...    .+.-.+|.+..++........         ..-
T Consensus        96 ~~~~----------------~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~~~---------~~~  150 (295)
T d2ghsa1          96 LESD----------------LPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFADI---------SIP  150 (295)
T ss_dssp             SSTT----------------CTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEEEE---------SSE
T ss_pred             eecC----------------CCcccceeeEECCCCCEEEEeccccccccceeEeeecCCcEEEEeecc---------CCc
Confidence            2111                01225788999999997776432    234566766666554433211         134


Q ss_pred             eeeeeccCCCEEEEEcccCCCCCeeEEECCCCC--CCcc----c--eeecCCccceEEEEEcCCCCEEEEEeCCC-EEEE
Q psy7108         207 NRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK--KGDM----A--ARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIY  277 (703)
Q Consensus       207 ~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~--~~~~----~--~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iw  277 (703)
                      +.++++++++.++++....     ..|..+++.  .+..    .  ....+..+....+++..+|+..++.-..+ |..|
T Consensus       151 Ng~~~s~d~~~l~~~dt~~-----~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~  225 (295)
T d2ghsa1         151 NSICFSPDGTTGYFVDTKV-----NRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRY  225 (295)
T ss_dssp             EEEEECTTSCEEEEEETTT-----CEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEE
T ss_pred             ceeeecCCCceEEEeeccc-----ceeeEeeecccccccccceEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEe
Confidence            6789999999776655432     356655443  2211    1  11223445678899999999777666666 9999


Q ss_pred             EcCCCceecce
Q psy7108         278 SLDSGYVFDPF  288 (703)
Q Consensus       278 d~~~~~~~~~~  288 (703)
                      +- .|+.+..+
T Consensus       226 dp-~G~~~~~i  235 (295)
T d2ghsa1         226 DT-DGNHIARY  235 (295)
T ss_dssp             CT-TCCEEEEE
T ss_pred             cC-CCcEeeEe
Confidence            95 56665444

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.90  E-value=0.0012  Score=64.71  Aligned_cols=200  Identities=14%  Similarity=0.097  Sum_probs=126.1

Q ss_pred             eccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecC-----CCcEEEEEEecCCCE
Q psy7108          31 GDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQL-----LSDALCVAYKPDGTE  105 (703)
Q Consensus        31 ~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~-----~~~V~~v~~spdg~~  105 (703)
                      +|..+...  .++. ....+.++++.+  +|.+++++ .+ -+.++|..+++. ..+...     ...+..+.+.|+|++
T Consensus        45 ~d~~~g~~--~~~~-~~~~~~~i~~~~--dg~l~va~-~~-gl~~~d~~tg~~-~~l~~~~~~~~~~~~nd~~vd~~G~i  116 (295)
T d2ghsa1          45 LHLASGRK--TVHA-LPFMGSALAKIS--DSKQLIAS-DD-GLFLRDTATGVL-TLHAELESDLPGNRSNDGRMHPSGAL  116 (295)
T ss_dssp             EETTTTEE--EEEE-CSSCEEEEEEEE--TTEEEEEE-TT-EEEEEETTTCCE-EEEECSSTTCTTEEEEEEEECTTSCE
T ss_pred             EECCCCeE--EEEE-CCCCcEEEEEec--CCCEEEEE-eC-ccEEeeccccee-eEEeeeecCCCcccceeeEECCCCCE
Confidence            45444433  3332 345788999998  88777654 44 488899887753 233221     224788999999997


Q ss_pred             EEEEECC----CeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEE-ecCCcEEEE
Q psy7108         106 IVVATLD----GQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAA-GQSKYICIY  180 (703)
Q Consensus       106 las~s~d----g~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~-s~dg~I~lw  180 (703)
                      .++...+    +.-.+|.+..++.........                     .-..++|+++++.+..+ +..+.|..+
T Consensus       117 w~~~~~~~~~~~~g~l~~~~~g~~~~~~~~~~---------------------~~Ng~~~s~d~~~l~~~dt~~~~I~~~  175 (295)
T d2ghsa1         117 WIGTMGRKAETGAGSIYHVAKGKVTKLFADIS---------------------IPNSICFSPDGTTGYFVDTKVNRLMRV  175 (295)
T ss_dssp             EEEEEETTCCTTCEEEEEEETTEEEEEEEEES---------------------SEEEEEECTTSCEEEEEETTTCEEEEE
T ss_pred             EEEeccccccccceeEeeecCCcEEEEeeccC---------------------CcceeeecCCCceEEEeecccceeeEe
Confidence            7665432    345667776676554444322                     45789999999876654 556789988


Q ss_pred             ECCCCc--e---EEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceE
Q psy7108         181 SSREGI--L---LKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVF  255 (703)
Q Consensus       181 D~~~~~--~---~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~  255 (703)
                      ++....  .   ...+...     .+.......+++..+|...++.-..+      .|..||. .|+.+..+.-+...++
T Consensus       176 ~~d~~~~~~~~~~~~~~~~-----~~~~g~pdG~~vD~~GnlWva~~~~g------~V~~~dp-~G~~~~~i~lP~~~~T  243 (295)
T d2ghsa1         176 PLDARTGLPTGKAEVFIDS-----TGIKGGMDGSVCDAEGHIWNARWGEG------AVDRYDT-DGNHIARYEVPGKQTT  243 (295)
T ss_dssp             EBCTTTCCBSSCCEEEEEC-----TTSSSEEEEEEECTTSCEEEEEETTT------EEEEECT-TCCEEEEEECSCSBEE
T ss_pred             eecccccccccceEEEecc-----CcccccccceEEcCCCCEEeeeeCCC------ceEEecC-CCcEeeEecCCCCceE
Confidence            875321  1   1111111     11123556788999998666544332      6888985 5777777777667899


Q ss_pred             EEEEc-CCCCEE-EEEeC
Q psy7108         256 CVKFS-PTGQAW-VAATT  271 (703)
Q Consensus       256 ~l~~s-pdg~~l-~s~s~  271 (703)
                      +++|- ||.+.| +|...
T Consensus       244 ~~~FGG~d~~~LyvTta~  261 (295)
T d2ghsa1         244 CPAFIGPDASRLLVTSAR  261 (295)
T ss_dssp             EEEEESTTSCEEEEEEBC
T ss_pred             EEEEeCCCCCEEEEEECC
Confidence            99995 677766 44443

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=97.27  E-value=0.0013  Score=62.91  Aligned_cols=120  Identities=14%  Similarity=0.118  Sum_probs=74.7

Q ss_pred             EEecC--CCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec-C
Q psy7108          98 AYKPD--GTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ-S  174 (703)
Q Consensus        98 ~~spd--g~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~-d  174 (703)
                      ..+||  |+.+|..+ ++.|.+.|+.+++.... ..+..                    .+...+|||||+.|+.... +
T Consensus         5 ~~sPdi~G~~v~f~~-~~dl~~~d~~~g~~~~L-t~~~~--------------------~~~~p~~SPDG~~iaf~~~~~   62 (281)
T d1k32a2           5 LLNPDIHGDRIIFVC-CDDLWEHDLKSGSTRKI-VSNLG--------------------VINNARFFPDGRKIAIRVMRG   62 (281)
T ss_dssp             CEEEEEETTEEEEEE-TTEEEEEETTTCCEEEE-ECSSS--------------------EEEEEEECTTSSEEEEEEEES
T ss_pred             ccCCCCCCCEEEEEe-CCcEEEEECCCCCEEEE-ecCCC--------------------cccCEEECCCCCEEEEEEeeC
Confidence            45788  99988765 56799999998886543 33322                    5788999999999986532 2


Q ss_pred             -----CcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC
Q psy7108         175 -----KYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG  241 (703)
Q Consensus       175 -----g~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~  241 (703)
                           ..|.+++..+++..+... ... .............|+|+|+.+++............+...+...+
T Consensus        63 ~~~~~~~i~~~~~~~g~~~~lt~-~~~-~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~  132 (281)
T d1k32a2          63 SSLNTADLYFYNGENGEIKRITY-FSG-KSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGI  132 (281)
T ss_dssp             TTCCEEEEEEEETTTTEEEECCC-CCE-EEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGT
T ss_pred             CCCCceEEEEEEecCCceEEeee-cCC-CccCccccccccccCCCCCEEEEEEccCCCccceeeeeecCCCc
Confidence                 247888888776543211 110 00111224567889999999888765433332233444444433

>d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Fungal lipases
domain: Triacylglycerol lipase
species: Yeast (Candida antarctica), form b [TaxId: 34362]

Probab=97.07  E-value=2.1e-05  Score=78.05  Aligned_cols=56  Identities=20%  Similarity=0.147  Sum_probs=46.6

Q ss_pred             cCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108         528 LYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  583 (703)
Q Consensus       528 ~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~  583 (703)
                      ..++.+.+++|+..++.+++.++||||||.++..++.+.|....++..++.++|..
T Consensus        80 ae~la~~i~~v~~~~g~~kV~lVGhS~GG~~a~~~l~~~p~~~~~V~~~v~i~~~~  135 (317)
T d1tcaa_          80 TEYMVNAITALYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDY  135 (317)
T ss_dssp             HHHHHHHHHHHHHHTTSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCT
T ss_pred             HHHHHHHHHHHHHhccCCceEEEEeCchHHHHHHHHHHCCCcchheeEEEEeCCCC
Confidence            34677899999999999999999999999888776777787778888888877653

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.96  E-value=0.16  Score=47.79  Aligned_cols=206  Identities=8%  Similarity=-0.072  Sum_probs=122.2

Q ss_pred             ccCCCcCeEEEEEcCCCCCCEEEEE-eCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEE-CCCeEEEEEc
Q psy7108          43 LSGHEGPVSCIEFSPVLSSTGMVSA-SWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVAT-LDGQLIMFDV  120 (703)
Q Consensus        43 l~gH~~~V~~l~~sp~~dg~~L~sg-s~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s-~dg~I~vwd~  120 (703)
                      +..+...+.+++|.+  ..+.|.-+ ..++.|+..++...............+.++++..-+..|..+. ..+.|.+.++
T Consensus        31 ~~~~~~~~~~ld~D~--~~~~iywsd~~~~~I~~~~l~g~~~~~v~~~~~~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~  108 (263)
T d1npea_          31 LHIPAKVIIGLAFDC--VDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKM  108 (263)
T ss_dssp             EEEEEEEEEEEEEET--TTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred             cccCCCcEEEEEEEe--CCCEEEEEECCCCeEEEEEcccCCcEEEEEeccccccEEEEeccCCeEEEeccCCCEEEEEec
Confidence            444556688899998  66666655 4567788888865543333323346789999988777776554 4678999998


Q ss_pred             CCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC---CcEEEEECCCCceEEEEEeccCC
Q psy7108         121 ESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS---KYICIYSSREGILLKKFTITQNK  197 (703)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d---g~I~lwD~~~~~~~~~~~~~~~~  197 (703)
                      +.......+....                    .....++++|...++......   ..|.--++....... +....  
T Consensus       109 dg~~~~~l~~~~l--------------------~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~~~-i~~~~--  165 (263)
T d1npea_         109 DGTQRRVLFDTGL--------------------VNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRI-LAQDN--  165 (263)
T ss_dssp             TSCSCEEEECSSC--------------------SSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEE-EECTT--
T ss_pred             CCceEEEEecccc--------------------cCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCcee-eeeec--
Confidence            7654433222211                    257889999977777654322   235545655433322 21111  


Q ss_pred             ccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCC-C-EE
Q psy7108         198 SLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTE-G-VH  275 (703)
Q Consensus       198 ~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~D-g-v~  275 (703)
                           ......+++.+.++.++.+....     ..|...|...........+.. ...++++.  +..|.....+ + |.
T Consensus       166 -----~~~P~glaiD~~~~~lYw~d~~~-----~~I~~~~~~g~~~~~v~~~~~-~P~~lav~--~~~lYwtd~~~~~I~  232 (263)
T d1npea_         166 -----LGLPNGLTFDAFSSQLCWVDAGT-----HRAECLNPAQPGRRKVLEGLQ-YPFAVTSY--GKNLYYTDWKTNSVI  232 (263)
T ss_dssp             -----CSCEEEEEEETTTTEEEEEETTT-----TEEEEEETTEEEEEEEEECCC-SEEEEEEE--TTEEEEEETTTTEEE
T ss_pred             -----ccccceEEEeecCcEEEEEeCCC-----CEEEEEECCCCCeEEEECCCC-CcEEEEEE--CCEEEEEECCCCEEE
Confidence                 12446789988887776654321     256666665443322233322 34577775  5566655544 4 88


Q ss_pred             EEEcCCCceec
Q psy7108         276 IYSLDSGYVFD  286 (703)
Q Consensus       276 iwd~~~~~~~~  286 (703)
                      ..+..+++...
T Consensus       233 ~~~~~~g~~~~  243 (263)
T d1npea_         233 AMDLAISKEMD  243 (263)
T ss_dssp             EEETTTTEEEE
T ss_pred             EEECCCCccce
Confidence            88888777543

>d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Fungal lipases
domain: Triacylglycerol lipase
species: Yeast (Candida antarctica), form b [TaxId: 34362]

Probab=96.91  E-value=0.00015  Score=71.70  Aligned_cols=55  Identities=20%  Similarity=0.154  Sum_probs=49.9

Q ss_pred             chHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccc
Q psy7108         612 DTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF  666 (703)
Q Consensus       612 d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~  666 (703)
                      ++.+.|++|+..++..++.+||||||+.+...++...|....+|+.++.++|.-.
T Consensus        82 ~la~~i~~v~~~~g~~kV~lVGhS~GG~~a~~~l~~~p~~~~~V~~~v~i~~~~~  136 (317)
T d1tcaa_          82 YMVNAITALYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYK  136 (317)
T ss_dssp             HHHHHHHHHHHHTTSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTT
T ss_pred             HHHHHHHHHHHhccCCceEEEEeCchHHHHHHHHHHCCCcchheeEEEEeCCCCC
Confidence            4678999999999999999999999999999999988988889999999998643

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.79  E-value=0.23  Score=46.97  Aligned_cols=192  Identities=14%  Similarity=0.174  Sum_probs=113.4

Q ss_pred             EEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCC-CcEEEEEec
Q psy7108          53 IEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVES-AAQVGSVEA  131 (703)
Q Consensus        53 l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~-~~~~~~~~~  131 (703)
                      .-.+|  ..+.||--+ ..+++++|+++.++.... ...++|.--.|-.+ +.|+..+ +..|+-|+++. .++.+.++.
T Consensus        68 AIMhP--~~~IiALra-g~~LQiFnletK~klks~-~~~e~VvfWkWis~-~~L~lVT-~taVYHW~~~g~s~P~k~fdR  141 (327)
T d1utca2          68 AIMNP--ASKVIALKA-GKTLQIFNIEMKSKMKAH-TMTDDVTFWKWISL-NTVALVT-DNAVYHWSMEGESQPVKMFDR  141 (327)
T ss_dssp             EEECS--SSSEEEEEE-TTEEEEEETTTTEEEEEE-ECSSCCCEEEESSS-SEEEEEC-SSEEEEEESSSSCCCEEEEEC
T ss_pred             hhcCC--CCcEEEEec-CCeEEEEehhHhhhhceE-EcCCCcEEEEecCC-CEEEEEc-CCceEEEcccCCCCchhhhhh
Confidence            34678  778887766 458999999988655544 45567777778754 4555543 56899999954 356777777


Q ss_pred             cccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe---c----CCcEEEEECCCCceEEEEEeccC--------
Q psy7108         132 RRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG---Q----SKYICIYSSREGILLKKFTITQN--------  196 (703)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s---~----dg~I~lwD~~~~~~~~~~~~~~~--------  196 (703)
                      |..+.                +..|-.-..+++.++++..+   .    .|.+.+|..+.+. .+.+++|..        
T Consensus       142 ~~~L~----------------~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~~-sQ~ieGhaa~F~~~~~~  204 (327)
T d1utca2         142 HSSLA----------------GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKME  204 (327)
T ss_dssp             CGGGT----------------TCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE-EEEECCSEEEEEEECCT
T ss_pred             ccccc----------------CceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccCc-CccccceeeeeEEEEcC
Confidence            76532                22577777788888776532   2    2567788776431 111111110        


Q ss_pred             --------------------------------------------CccccccccceeeeeccCCCEEEEEcccCCCCCeeE
Q psy7108         197 --------------------------------------------KSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVV  232 (703)
Q Consensus       197 --------------------------------------------~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~  232 (703)
                                                                  ...+...+.--++..|+.-..+++-+..|      .
T Consensus       205 g~~~~~~lf~fa~r~~~~~kLhIiEig~~~~g~~~f~kk~vdi~fppea~~DFPvamqvs~kygiiyviTK~G------~  278 (327)
T d1utca2         205 GNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYG------Y  278 (327)
T ss_dssp             TCSSCEEEEEEEEEETTEEEEEEEECSCCCTTCCCCCCEEEECCCCTTCTTCCEEEEEEETTTTEEEEEETTS------E
T ss_pred             CCCCCceEEEEEECCCCCcEEEEEEcCCCccCCCCCcceeEEEECCccccCCcEEEEEeeccCCEEEEEecCc------E
Confidence                                                        11112223334455555555555555543      7


Q ss_pred             EECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC
Q psy7108         233 LKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG  273 (703)
Q Consensus       233 i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg  273 (703)
                      ++++|+.++.++..-.-....|...+-+.+..-+++...+|
T Consensus       279 i~lyDleTgt~i~~nRIs~~~iF~~a~~~~~~Gi~~VNr~G  319 (327)
T d1utca2         279 IHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKG  319 (327)
T ss_dssp             EEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTS
T ss_pred             EEEEEcccccEEEEeecCCCceEEeccCCCCceEEEECCCC
Confidence            89999999987765544444444434344444444455555

>d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Thioesterases
domain: Myristoyl-ACP-specific thioesterase
species: Vibrio harveyi [TaxId: 669]

Probab=96.74  E-value=0.00019  Score=70.93  Aligned_cols=51  Identities=8%  Similarity=-0.014  Sum_probs=39.0

Q ss_pred             ecchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccc
Q psy7108         610 LYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF  666 (703)
Q Consensus       610 ~~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~  666 (703)
                      ..|+.+.++|+.+. +..+++++|||+|+.+++.+++..+     ++.+++.+|+..
T Consensus        87 ~~dl~~vi~~l~~~-~~~~i~lvG~SmGG~ial~~A~~~~-----v~~li~~~g~~~  137 (302)
T d1thta_          87 KNSLCTVYHWLQTK-GTQNIGLIAASLSARVAYEVISDLE-----LSFLITAVGVVN  137 (302)
T ss_dssp             HHHHHHHHHHHHHT-TCCCEEEEEETHHHHHHHHHTTTSC-----CSEEEEESCCSC
T ss_pred             HHHHHHHHHhhhcc-CCceeEEEEEchHHHHHHHHhcccc-----cceeEeeccccc
Confidence            47899999998654 5568999999999999988876533     456667777653

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.46  E-value=0.37  Score=45.25  Aligned_cols=208  Identities=7%  Similarity=-0.046  Sum_probs=119.2

Q ss_pred             ccccCCCcCeEEEEEcCCCCCCEEEEEe-CCCcEEEEEcCCCc---eeEEEec-CCCcEEEEEEecCCCEEEEEE-CCCe
Q psy7108          41 EVLSGHEGPVSCIEFSPVLSSTGMVSAS-WDKTVKLWNAVETD---TQHETIQ-LLSDALCVAYKPDGTEIVVAT-LDGQ  114 (703)
Q Consensus        41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs-~Dg~V~iWd~~~~~---~~~~~~~-~~~~V~~v~~spdg~~las~s-~dg~  114 (703)
                      ..+......+.+++|++  ..+.|.-.. .++.|+.-++....   ....... ....+.++++.+.+..|..+. ..++
T Consensus        23 ~~~~~~~~~~~~id~d~--~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~p~glAvD~~~~~lY~~d~~~~~  100 (266)
T d1ijqa1          23 TSLIPNLRNVVALDTEV--ASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGT  100 (266)
T ss_dssp             EEEECSCSSEEEEEEET--TTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTE
T ss_pred             eeeeCCCCceEEEEEEe--CCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCCCCcceEEEeeccceEEEEecCCCE
Confidence            34444556778999999  677666554 45667666664321   1122222 334577899988777776654 4568


Q ss_pred             EEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe--cCCcEEEEECCCCceEEEEE
Q psy7108         115 LIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG--QSKYICIYSSREGILLKKFT  192 (703)
Q Consensus       115 I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s--~dg~I~lwD~~~~~~~~~~~  192 (703)
                      |.+.+++.......+.....                    ....++.+|...+|....  ..+.|.-.++...... .+.
T Consensus       101 I~v~~~~g~~~~~~~~~~~~--------------------~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~~~-~l~  159 (266)
T d1ijqa1         101 VSVADTKGVKRKTLFRENGS--------------------KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY-SLV  159 (266)
T ss_dssp             EEEEETTSSSEEEEEECTTC--------------------CEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE-EEE
T ss_pred             EEeEecCCceEEEEEcCCCC--------------------CcceEEEEcccCeEEEeccCCCcceeEeccCCCcee-ccc
Confidence            99999986665444443222                    578899998666665543  3345777777644333 222


Q ss_pred             eccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC--CccceEEEEEcCCCCEEEEEe
Q psy7108         193 ITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK--PEVRVFCVKFSPTGQAWVAAT  270 (703)
Q Consensus       193 ~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~--h~~~V~~l~~spdg~~l~s~s  270 (703)
                      ...       ....+.+++.+.++.++.+....     ..|...++...........  ......++++.  +..|..+.
T Consensus       160 ~~~-------~~~p~gl~iD~~~~~lYw~d~~~-----~~I~~~~~dG~~~~~~~~~~~~~~~p~~lav~--~~~ly~td  225 (266)
T d1ijqa1         160 TEN-------IQWPNGITLDLLSGRLYWVDSKL-----HSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTD  225 (266)
T ss_dssp             CSS-------CSCEEEEEEETTTTEEEEEETTT-----TEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEE
T ss_pred             ccc-------cceeeEEEeeccccEEEEecCCc-----CEEEEEECCCCCEEEEEeCCCcccccEEEEEE--CCEEEEEE
Confidence            111       12456789998888777654321     2566666654433222222  22345567765  44565554


Q ss_pred             -CCC-EEEEEcCCCcee
Q psy7108         271 -TEG-VHIYSLDSGYVF  285 (703)
Q Consensus       271 -~Dg-v~iwd~~~~~~~  285 (703)
                       .++ |...+..+++..
T Consensus       226 ~~~~~I~~~~~~~g~~~  242 (266)
T d1ijqa1         226 IINEAIFSANRLTGSDV  242 (266)
T ss_dssp             TTTTEEEEEETTTCCCC
T ss_pred             CCCCeEEEEECCCCcce
Confidence             444 777777776543

>d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Thioesterases
domain: Myristoyl-ACP-specific thioesterase
species: Vibrio harveyi [TaxId: 669]

Probab=96.29  E-value=0.00019  Score=70.93  Aligned_cols=51  Identities=10%  Similarity=0.060  Sum_probs=35.8

Q ss_pred             ccCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108         527 GLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  583 (703)
Q Consensus       527 g~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~  583 (703)
                      ...|+.++++|+.+. +..+++++|||+||..++.+.++.     .++.++..+|..
T Consensus        86 ~~~dl~~vi~~l~~~-~~~~i~lvG~SmGG~ial~~A~~~-----~v~~li~~~g~~  136 (302)
T d1thta_          86 GKNSLCTVYHWLQTK-GTQNIGLIAASLSARVAYEVISDL-----ELSFLITAVGVV  136 (302)
T ss_dssp             HHHHHHHHHHHHHHT-TCCCEEEEEETHHHHHHHHHTTTS-----CCSEEEEESCCS
T ss_pred             HHHHHHHHHHhhhcc-CCceeEEEEEchHHHHHHHHhccc-----ccceeEeecccc
Confidence            456888899999765 456899999999998777655532     244455555543

>d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Bacterial lipase
domain: Lipase
species: Chromobacterium viscosum [TaxId: 42739]

Probab=96.01  E-value=0.00024  Score=70.87  Aligned_cols=51  Identities=20%  Similarity=0.227  Sum_probs=42.4

Q ss_pred             cchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccc
Q psy7108         611 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS  664 (703)
Q Consensus       611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~  664 (703)
                      .++.+.|+.++..++.+++++||||||+..+..+++.+|+   +++.++.++|.
T Consensus        63 ~~l~~~i~~~~~~~~~~~v~lvGhS~GG~~~~~~~~~~p~---~v~~vv~i~~p  113 (319)
T d1cvla_          63 EQLLAYVKQVLAATGATKVNLIGHSQGGLTSRYVAAVAPQ---LVASVTTIGTP  113 (319)
T ss_dssp             HHHHHHHHHHHHHHCCSCEEEEEETTHHHHHHHHHHHCGG---GEEEEEEESCC
T ss_pred             HHHHHHHHHHHHHhCCCCEEEEeccccHHHHHHHHHHCcc---ccceEEEECCC
Confidence            4566788888999999999999999999999999998776   45667777753

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.00  E-value=0.63  Score=43.52  Aligned_cols=122  Identities=7%  Similarity=-0.093  Sum_probs=79.3

Q ss_pred             CcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEEC--CCeEEEEEcCCCc
Q psy7108          47 EGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATL--DGQLIMFDVESAA  124 (703)
Q Consensus        47 ~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~--dg~I~vwd~~~~~  124 (703)
                      ...+.++++.+. .+++..+-...+.|.+.++..................+++.|...++.....  .+.|.-.+++...
T Consensus        76 ~~~p~glAvD~~-~~~lY~~d~~~~~I~v~~~~g~~~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~  154 (266)
T d1ijqa1          76 IQAPDGLAVDWI-HSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD  154 (266)
T ss_dssp             CSCCCEEEEETT-TTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC
T ss_pred             CCCcceEEEeec-cceEEEEecCCCEEEeEecCCceEEEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCc
Confidence            345678888872 3444445456678999998766544444555667899999997776665543  3457777776544


Q ss_pred             EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEE-ecCCcEEEEECCCCceEE
Q psy7108         125 QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAA-GQSKYICIYSSREGILLK  189 (703)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~-s~dg~I~lwD~~~~~~~~  189 (703)
                      ........-                    .....+++++.++.|..+ ...+.|...|+.......
T Consensus       155 ~~~l~~~~~--------------------~~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG~~~~~  200 (266)
T d1ijqa1         155 IYSLVTENI--------------------QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKT  200 (266)
T ss_dssp             EEEEECSSC--------------------SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred             eeccccccc--------------------ceeeEEEeeccccEEEEecCCcCEEEEEECCCCCEEE
Confidence            333332211                    156889999988877766 456789999987654433

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=95.78  E-value=0.24  Score=49.34  Aligned_cols=95  Identities=6%  Similarity=0.078  Sum_probs=63.9

Q ss_pred             CCCEEEEEE-CCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEc--CCCCEEEEEecC----
Q psy7108         102 DGTEIVVAT-LDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYS--ADGSCILAAGQS----  174 (703)
Q Consensus       102 dg~~las~s-~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~s--pdg~~l~s~s~d----  174 (703)
                      ||+++++.. .+.+|.+.|+++.+....++....                   ..+..+...  |+..+++..+.+    
T Consensus        98 DGrylFVNDkan~RVAvIdl~~fkt~kIi~iPn~-------------------~~~HG~r~~~~p~T~YV~~~~e~~vP~  158 (459)
T d1fwxa2          98 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNA-------------------KGIHGLRPQKWPRSNYVFCNGEDETPL  158 (459)
T ss_dssp             EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSC-------------------CSEEEEEECCSSBCSEEEEEECSCEES
T ss_pred             ceeEEEEEcCCCceEEEEECcceeeeEEEecCCC-------------------CCCceeecccCCCeEEEEccCcccccc
Confidence            788887766 477899999999988766544321                   134555544  445566655542    


Q ss_pred             --------------CcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEccc
Q psy7108         175 --------------KYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRE  224 (703)
Q Consensus       175 --------------g~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~  224 (703)
                                    +.+...|..+.+.........         ....+.++++|+++++++.+
T Consensus       159 pndg~~l~d~~~y~~~~t~ID~~tm~V~~QV~V~g---------~ld~~~~s~dGK~af~TsyN  213 (459)
T d1fwxa2         159 VNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG---------NLDNCDADYEGKWAFSTSYN  213 (459)
T ss_dssp             SCSSSSTTCGG-EEEEEEEEETTTTEEEEEEEESS---------CCCCEEECSSSSEEEEEESC
T ss_pred             CCCCccccchhhcceEEEEEecCCceEEEEeeeCC---------ChhccccCCCCCEEEEEecc
Confidence                          236778988887766655332         34568999999999887754

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.78  E-value=1.2  Score=44.82  Aligned_cols=106  Identities=15%  Similarity=0.187  Sum_probs=66.6

Q ss_pred             CCCcCeEEEEEcCCCCCCEEEEE-eCCC----cEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECC-------
Q psy7108          45 GHEGPVSCIEFSPVLSSTGMVSA-SWDK----TVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLD-------  112 (703)
Q Consensus        45 gH~~~V~~l~~sp~~dg~~L~sg-s~Dg----~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~d-------  112 (703)
                      ++.-.+...++||  ++++++-+ +.+|    ++++.|+.+++.+...+... ....++|++|++.|+....+       
T Consensus       122 ~~~~~~~~~~~Sp--d~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i~~~-~~~~~~W~~D~~~~~Y~~~~~~~~~~~  198 (430)
T d1qfma1         122 DGTVALRGYAFSE--DGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERV-KFSCMAWTHDGKGMFYNAYPQQDGKSD  198 (430)
T ss_dssp             SSCEEEEEEEECT--TSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEE-CSCCEEECTTSSEEEEEECCCCSSCCS
T ss_pred             cccceecceEecC--CCCEEEEEeccccCchheeEEeccCcceecccccccc-cccceEEcCCCCEEEEEEeccccCccc
Confidence            4444456778899  99988854 3333    68999999997554333221 12468899999988766543       


Q ss_pred             ---------CeEEEEEcCCCcE--EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEE
Q psy7108         113 ---------GQLIMFDVESAAQ--VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAA  171 (703)
Q Consensus       113 ---------g~I~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~  171 (703)
                               ..|..+.+.+...  ...+.....                  ...+..+..++++++++..
T Consensus       199 ~~~~~~~~~~~v~~h~lgt~~~~d~~v~~e~d~------------------~~~~~~~~~s~d~~~l~i~  250 (430)
T d1qfma1         199 GTETSTNLHQKLYYHVLGTDQSEDILCAEFPDE------------------PKWMGGAELSDDGRYVLLS  250 (430)
T ss_dssp             SSCCCCCCCCEEEEEETTSCGGGCEEEECCTTC------------------TTCEEEEEECTTSCEEEEE
T ss_pred             ccccccCCcceEEEEECCCCccccccccccccC------------------CceEEeeeccCCcceeeEE
Confidence                     2477777766532  223322211                  1246677889999998754

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=95.61  E-value=0.64  Score=46.19  Aligned_cols=186  Identities=9%  Similarity=0.031  Sum_probs=113.2

Q ss_pred             CCCEEEEEe-CCCcEEEEEcCCCceeEEE-ecCCCcEEEEEEecC--CCEEEEEECCC------------------eEEE
Q psy7108          60 SSTGMVSAS-WDKTVKLWNAVETDTQHET-IQLLSDALCVAYKPD--GTEIVVATLDG------------------QLIM  117 (703)
Q Consensus        60 dg~~L~sgs-~Dg~V~iWd~~~~~~~~~~-~~~~~~V~~v~~spd--g~~las~s~dg------------------~I~v  117 (703)
                      ||++|+... .+..|-+-|+++.++...+ ......+..++..++  -.+++..+.+.                  .+.+
T Consensus        98 DGrylFVNDkan~RVAvIdl~~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y~~~~t~  177 (459)
T d1fwxa2          98 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA  177 (459)
T ss_dssp             EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-EEEEEEE
T ss_pred             ceeEEEEEcCCCceEEEEECcceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCCCccccchhhcceEEEE
Confidence            577777664 6778888999888543322 234556777777554  45777766632                  3677


Q ss_pred             EEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCC---------------cE-----
Q psy7108         118 FDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSK---------------YI-----  177 (703)
Q Consensus       118 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg---------------~I-----  177 (703)
                      +|.++.+....+....                     ....+++++||+++++.+.+.               .+     
T Consensus       178 ID~~tm~V~~QV~V~g---------------------~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~  236 (459)
T d1fwxa2         178 VDADKWEVAWQVLVSG---------------------NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNI  236 (459)
T ss_dssp             EETTTTEEEEEEEESS---------------------CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEH
T ss_pred             EecCCceEEEEeeeCC---------------------ChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEech
Confidence            8888887766655432                     345688999999988866331               13     


Q ss_pred             ------------------EEEECCCC---ceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECC
Q psy7108         178 ------------------CIYSSREG---ILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLP  236 (703)
Q Consensus       178 ------------------~lwD~~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iw  236 (703)
                                        .+.|.+..   ..++.+...         .....+.++|||+++++++.-+     .++.+.
T Consensus       237 ~rie~av~~Gk~~eingV~VVD~~~~~~~~v~~yIPVp---------KsPHGV~vSPDGKyi~VaGKLs-----~tVSVi  302 (459)
T d1fwxa2         237 AEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIA---------NNPHGCNMAPDKKHLCVAGKLS-----PTVTVL  302 (459)
T ss_dssp             HHHHHHHHHTCSEEETTEEEEECSGG--CSSEEEEEEE---------SSCCCEEECTTSSEEEEECTTS-----SBEEEE
T ss_pred             HHhHHhhhcCCcEEeCCceeecccccCCcceeEEEecC---------CCCCceEECCCCCEEEEeCCcC-----CcEEEE
Confidence                              33333221   111111111         1345689999999999988654     468888


Q ss_pred             CCCCCccc--------e---eecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcC
Q psy7108         237 GVKKGDMA--------A---RVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLD  280 (703)
Q Consensus       237 d~~~~~~~--------~---~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~  280 (703)
                      |+++-...        .   ......-....-+|+..|....|---|. |.-|++.
T Consensus       303 D~~Ki~~~~~~~~~~~~~~~~e~elglgPLht~fd~~g~aytslfids~v~kw~~~  358 (459)
T d1fwxa2         303 DVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIE  358 (459)
T ss_dssp             EGGGHHHHHHSCC-GGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHH
T ss_pred             EehhhhhhhcccCCccccEEeecccCcCccccccCCCceEEEEeeccceEEEEecc
Confidence            87642111        0   0111223355678988886555555788 9999985

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.48  E-value=1  Score=42.00  Aligned_cols=190  Identities=5%  Similarity=-0.116  Sum_probs=111.3

Q ss_pred             CEEEEEeCCCcEEEEEcCCCce-----eEEEecCCCcEEEEEEecCCCEEEEEE-CCCeEEEEEcCCCcEEEEEeccccC
Q psy7108          62 TGMVSASWDKTVKLWNAVETDT-----QHETIQLLSDALCVAYKPDGTEIVVAT-LDGQLIMFDVESAAQVGSVEARRDL  135 (703)
Q Consensus        62 ~~L~sgs~Dg~V~iWd~~~~~~-----~~~~~~~~~~V~~v~~spdg~~las~s-~dg~I~vwd~~~~~~~~~~~~~~~~  135 (703)
                      .+|+.+.. +.|+-.+++....     ......+...+.+++|.+.++.|..+. .++.|+..+++.+.....+....  
T Consensus         2 ~fLl~s~~-~~I~~~~ld~~~~~~~~~~~~~~~~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~~v~~~~~--   78 (263)
T d1npea_           2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDL--   78 (263)
T ss_dssp             EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTC--
T ss_pred             CEEEEeCC-CeEEEEECCCccccccccccccccCCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcEEEEEecc--
Confidence            44544443 4666666654321     122223444577899998888777764 45778888887665544443321  


Q ss_pred             CCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEE-ecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccC
Q psy7108         136 DSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAA-GQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEF  214 (703)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~-s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spd  214 (703)
                                        ..+..+++..-+..|..+ ...+.|.+.++....+..... ..       ......+++.|.
T Consensus        79 ------------------~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~~~~~l~~-~~-------l~~p~~l~vdp~  132 (263)
T d1npea_          79 ------------------GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFD-TG-------LVNPRGIVTDPV  132 (263)
T ss_dssp             ------------------CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-SS-------CSSEEEEEEETT
T ss_pred             ------------------ccccEEEEeccCCeEEEeccCCCEEEEEecCCceEEEEec-cc-------ccCCcEEEEecc
Confidence                              157889998766666655 456789999988655432221 11       124678899998


Q ss_pred             CCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeC-CC-EEEEEcCCCc
Q psy7108         215 GNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATT-EG-VHIYSLDSGY  283 (703)
Q Consensus       215 g~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~-Dg-v~iwd~~~~~  283 (703)
                      ..+++.+......   ..|..-++............-....++++++.++.|..+.. .+ |...+++...
T Consensus       133 ~g~ly~t~~~~~~---~~I~r~~~dG~~~~~i~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~~g~~  200 (263)
T d1npea_         133 RGNLYWTDWNRDN---PKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPG  200 (263)
T ss_dssp             TTEEEEEECCSSS---CEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEE
T ss_pred             cCcEEEeecCCCC---cEEEEecCCCCCceeeeeecccccceEEEeecCcEEEEEeCCCCEEEEEECCCCC
Confidence            8877766543211   12322233322222222223345689999998888866643 44 7778876543

>d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Atu1826-like
domain: XC6422 protein
species: Xanthomonas campestris [TaxId: 339]

Probab=95.13  E-value=0.0011  Score=61.71  Aligned_cols=51  Identities=22%  Similarity=0.215  Sum_probs=37.8

Q ss_pred             cCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108         528 LYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  583 (703)
Q Consensus       528 ~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~  583 (703)
                      +.|+.++++|+.+.....++.++|||+||..++..+.     ..++..+++.+|..
T Consensus        92 ~~D~~a~~~~~~~~~~~~~v~l~G~S~Gg~va~~~a~-----~~~~~~lil~ap~~  142 (218)
T d2fuka1          92 QDDLRAVAEWVRAQRPTDTLWLAGFSFGAYVSLRAAA-----ALEPQVLISIAPPA  142 (218)
T ss_dssp             HHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHH-----HHCCSEEEEESCCB
T ss_pred             HHHHHHHHHHHhhcccCceEEEEEEcccchhhhhhhc-----ccccceEEEeCCcc
Confidence            3577889999998877889999999999986654332     22455667777754

>d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Bacterial lipase
domain: Lipase A
species: Bacillus subtilis [TaxId: 1423]

Probab=94.79  E-value=0.0049  Score=55.11  Aligned_cols=51  Identities=22%  Similarity=0.193  Sum_probs=40.8

Q ss_pred             hHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccc
Q psy7108         613 TTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS  664 (703)
Q Consensus       613 ~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~  664 (703)
                      +-+.++.+++..+.+++++||||||+.++..++...+ ..++|+.+|.++|.
T Consensus        54 l~~~i~~~~~~~~~~~v~lvGHSmGG~va~~~~~~~~-~~~~V~~~V~l~~p  104 (179)
T d1ispa_          54 LSRFVQKVLDETGAKKVDIVAHSMGGANTLYYIKNLD-GGNKVANVVTLGGA  104 (179)
T ss_dssp             HHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHSS-GGGTEEEEEEESCC
T ss_pred             HHHHHHHHHHhcCCceEEEEeecCcCHHHHHHHHHcC-CchhhCEEEEECCC
Confidence            4457788888888889999999999999888776643 23578899999864

>d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: DPP6 catalytic domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.62  E-value=0.0026  Score=60.60  Aligned_cols=55  Identities=9%  Similarity=0.039  Sum_probs=36.2

Q ss_pred             cCCchhhHHHhHccCC--CcceEEEEEecCceeeeeccCCCch-hhhhHHHhhhhhhh
Q psy7108         528 LYDTTATIDYILNQTG--HNSLITLGHSLGTTNVLIAGSLRPE-YQTKVRLNVLWAQS  582 (703)
Q Consensus       528 ~~d~~~~~~~i~~~~~--~~~~~~~g~S~G~~~~~~~~~~~~~-~~~~~~~~~~~~p~  582 (703)
                      +.|+.++++|+.+...  .++++++|||+||+.+..++...+. ....++.....+|+
T Consensus        94 ~~d~~~~i~~l~~~~~id~~ri~v~G~S~GG~~a~~~~~~~~~~~~~~~~~~~~~~~~  151 (258)
T d1xfda2          94 EKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPI  151 (258)
T ss_dssp             HHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCC
T ss_pred             HHHHHHhhhhhcccccccccceeccccCchHHHHHHHHhcCCcccceeeeeeeccccc
Confidence            4466788999998875  4789999999999776555544443 23334433344443

>d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Bacterial lipase
domain: Lipase
species: Chromobacterium viscosum [TaxId: 42739]

Probab=94.44  E-value=0.0023  Score=63.32  Aligned_cols=40  Identities=23%  Similarity=0.359  Sum_probs=30.8

Q ss_pred             CchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchh
Q psy7108         530 DTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEY  569 (703)
Q Consensus       530 d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~  569 (703)
                      ++.+.++.++...+.+++.++|||+||.+++...++.|+.
T Consensus        64 ~l~~~i~~~~~~~~~~~v~lvGhS~GG~~~~~~~~~~p~~  103 (319)
T d1cvla_          64 QLLAYVKQVLAATGATKVNLIGHSQGGLTSRYVAAVAPQL  103 (319)
T ss_dssp             HHHHHHHHHHHHHCCSCEEEEEETTHHHHHHHHHHHCGGG
T ss_pred             HHHHHHHHHHHHhCCCCEEEEeccccHHHHHHHHHHCccc
Confidence            3445566777777889999999999998887777766654

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=94.29  E-value=1.7  Score=42.22  Aligned_cols=229  Identities=11%  Similarity=0.025  Sum_probs=114.5

Q ss_pred             CCcCeEEEEEcCCCCCCEEEEEeCC-CcEEEEEcCCCceeEEEec--CCCcEEEEEEecCCCEEEEEECC------CeEE
Q psy7108          46 HEGPVSCIEFSPVLSSTGMVSASWD-KTVKLWNAVETDTQHETIQ--LLSDALCVAYKPDGTEIVVATLD------GQLI  116 (703)
Q Consensus        46 H~~~V~~l~~sp~~dg~~L~sgs~D-g~V~iWd~~~~~~~~~~~~--~~~~V~~v~~spdg~~las~s~d------g~I~  116 (703)
                      |.....+.++.+  ++.+++.|+.+ ..+.+||..+..-. ....  ....-.+++..+||+.++.++.+      ..+.
T Consensus        74 ~~~~~~~~~~~~--~g~i~v~Gg~~~~~~~~yd~~~~~w~-~~~~~~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~  150 (387)
T d1k3ia3          74 HDMFCPGISMDG--NGQIVVTGGNDAKKTSLYDSSSDSWI-PGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGE  150 (387)
T ss_dssp             CCCSSCEEEECT--TSCEEEECSSSTTCEEEEEGGGTEEE-ECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEE
T ss_pred             cccceeEEEEec--CCcEEEeecCCCcceeEecCccCccc-ccccccccccccceeeecCCceeeeccccccccccceee
Confidence            434445667888  99999998765 57999998776321 1111  22223457778899999988753      3589


Q ss_pred             EEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccC
Q psy7108         117 MFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQN  196 (703)
Q Consensus       117 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~  196 (703)
                      +||..+.+-.. +.............    ......... ..+...++|+.++.++.++.+.++|..+......-.....
T Consensus       151 ~yd~~~~~W~~-~~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  224 (387)
T d1k3ia3         151 VYSPSSKTWTS-LPNAKVNPMLTADK----QGLYRSDNH-AWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSN  224 (387)
T ss_dssp             EEETTTTEEEE-ETTSCSGGGCCCCT----TGGGTTTCS-CCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEET
T ss_pred             eecCCCCceee-cCCCcccccccccc----cceeeccce-eEEEEeCCCCEEEecCcCCcEEecCcccCcEeeccccccC
Confidence            99998775422 11110000000000    000000111 1123346788888887778888888887754433222111


Q ss_pred             Cccccccccceeeee-ccCCCEEEEEcccCCCCC-----eeEEECCCCCCCccceeecC---CccceEEEEEcCCCCEEE
Q psy7108         197 KSLDGINDFINRRKM-TEFGNVSLIETRETHEGG-----NVVLKLPGVKKGDMAARVLK---PEVRVFCVKFSPTGQAWV  267 (703)
Q Consensus       197 ~~~~~~~~~v~~~~~-spdg~~l~~~~~~~~~~~-----~~~i~iwd~~~~~~~~~~~~---h~~~V~~l~~spdg~~l~  267 (703)
                      .........-.++.+ ..+++.+++++.......     .....+++............   ....-.+....+||+.++
T Consensus       225 ~~~~~~~~~~~~~~~~~~~g~v~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~dg~i~v  304 (387)
T d1k3ia3         225 RGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFI  304 (387)
T ss_dssp             TEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEE
T ss_pred             cccCcccccccEEEeeccCCceEEEEeccCCCCCcccceeecccccccccCCCceeeccccccccccceeeeccCCeEEE
Confidence            111110011112222 245666666664432211     12233333222211111111   111123455568999989


Q ss_pred             EEeCC------------CEEEEEcCCCc
Q psy7108         268 AATTE------------GVHIYSLDSGY  283 (703)
Q Consensus       268 s~s~D------------gv~iwd~~~~~  283 (703)
                      .|+.+            .+.+||..+.+
T Consensus       305 ~GG~~~~~~~~~~~~~~~ve~Ydp~~~~  332 (387)
T d1k3ia3         305 TGGQRRGIPFEDSTPVFTPEIYVPEQDT  332 (387)
T ss_dssp             ECCBSBCCTTCCCSBCCCCEEEEGGGTE
T ss_pred             ECCcccCccCCCCcEeceEEEEECCCCe
Confidence            88843            14678876654

>d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Haloalkane dehalogenase
domain: Haloalkane dehalogenase
species: Xanthobacter autotrophicus [TaxId: 280]

Probab=94.28  E-value=0.0039  Score=60.68  Aligned_cols=50  Identities=6%  Similarity=0.060  Sum_probs=38.6

Q ss_pred             HHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccccCC
Q psy7108         617 IDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLGN  669 (703)
Q Consensus       617 i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~~~  669 (703)
                      +.-+++..+.++++++|||+|+.+++.++..+|+   +|+.+++++|......
T Consensus       106 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~P~---~V~~lvl~~~~~~~~~  155 (310)
T d1b6ga_         106 LLALIERLDLRNITLVVQDWGGFLGLTLPMADPS---RFKRLIIMNACLMTDP  155 (310)
T ss_dssp             HHHHHHHHTCCSEEEEECTHHHHHHTTSGGGSGG---GEEEEEEESCCCCCCT
T ss_pred             hhhhhhhccccccccccceecccccccchhhhcc---ccceEEEEcCccCCCc
Confidence            3334455566789999999999999999999886   6888888887654433

>d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: PepX catalytic domain-like
domain: Alpha-amino acid ester hydrolase
species: Xanthomonas citri [TaxId: 346]

Probab=93.92  E-value=0.0054  Score=62.25  Aligned_cols=52  Identities=17%  Similarity=0.198  Sum_probs=37.2

Q ss_pred             cCCchhhHHHhHccC--CCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhh
Q psy7108         528 LYDTTATIDYILNQT--GHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS  582 (703)
Q Consensus       528 ~~d~~~~~~~i~~~~--~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~  582 (703)
                      ..|..++++|+....  ...+++++|+|+||++.++++...|   .++++.++.+|.
T Consensus       124 ~~D~~~~i~w~~~~~~~~~~~vg~~G~SygG~~~~~~a~~~~---~~l~a~v~~~~~  177 (381)
T d1mpxa2         124 ATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPH---PALKVAVPESPM  177 (381)
T ss_dssp             HHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCC---TTEEEEEEESCC
T ss_pred             HHHHHHHHHHHhhcCCcCccceeeecccHHHHHHHHHHhccc---cccceeeeeccc
Confidence            468888999998764  3469999999999988877666543   234455555544

>d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Aclacinomycin methylesterase RdmC
domain: Aclacinomycin methylesterase RdmC
species: Streptomyces purpurascens [TaxId: 1924]

Probab=93.74  E-value=0.006  Score=58.64  Aligned_cols=43  Identities=14%  Similarity=0.141  Sum_probs=28.7

Q ss_pred             HHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhh
Q psy7108         535 IDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWA  580 (703)
Q Consensus       535 ~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~  580 (703)
                      +..++..-+.+++.++|||+||..++....+.|+   +++.++..+
T Consensus        83 ~~~ll~~l~~~~~~lvGhS~Gg~~a~~~a~~~P~---~v~~lvli~  125 (297)
T d1q0ra_          83 AVAVLDGWGVDRAHVVGLSMGATITQVIALDHHD---RLSSLTMLL  125 (297)
T ss_dssp             HHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGG---GEEEEEEES
T ss_pred             hccccccccccceeeccccccchhhhhhhccccc---ceeeeEEEc
Confidence            3445555566789999999999888776665553   444444443

>d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Bacterial lipase
domain: Lipase A
species: Bacillus subtilis [TaxId: 1423]

Probab=93.54  E-value=0.0023  Score=57.37  Aligned_cols=52  Identities=21%  Similarity=0.187  Sum_probs=34.9

Q ss_pred             chhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108         531 TTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  583 (703)
Q Consensus       531 ~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~  583 (703)
                      +.+.++.+++..+.+++.++|||+||.++...+.+.+ ..++++.++.++|+.
T Consensus        54 l~~~i~~~~~~~~~~~v~lvGHSmGG~va~~~~~~~~-~~~~V~~~V~l~~p~  105 (179)
T d1ispa_          54 LSRFVQKVLDETGAKKVDIVAHSMGGANTLYYIKNLD-GGNKVANVVTLGGAN  105 (179)
T ss_dssp             HHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHSS-GGGTEEEEEEESCCG
T ss_pred             HHHHHHHHHHhcCCceEEEEeecCcCHHHHHHHHHcC-CchhhCEEEEECCCC
Confidence            3445566666666789999999999987654443221 235677788877653

>d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: PepX catalytic domain-like
domain: Alpha-amino acid ester hydrolase
species: Acetobacter pasteurianus [TaxId: 438]

Probab=93.47  E-value=0.0089  Score=60.64  Aligned_cols=40  Identities=18%  Similarity=0.160  Sum_probs=31.7

Q ss_pred             cCCchhhHHHhHccC--CCcceEEEEEecCceeeeeccCCCc
Q psy7108         528 LYDTTATIDYILNQT--GHNSLITLGHSLGTTNVLIAGSLRP  567 (703)
Q Consensus       528 ~~d~~~~~~~i~~~~--~~~~~~~~g~S~G~~~~~~~~~~~~  567 (703)
                      ..|..++++|+....  ...+++++|+|+||++.+++++..+
T Consensus       129 ~~D~~~~i~w~~~q~~~~~g~vg~~G~SygG~~~~~~a~~~~  170 (385)
T d2b9va2         129 TTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPH  170 (385)
T ss_dssp             HHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCC
T ss_pred             HHHHHHHHHHHHhccCccccceeeccccHHHHHHHHHHhccC
Confidence            468888999998775  2468999999999988777666544

>d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Proline iminopeptidase-like
domain: Proline iminopeptidase
species: Xanthomonas campestris, pv. citri [TaxId: 339]

Probab=93.33  E-value=0.0083  Score=58.52  Aligned_cols=50  Identities=24%  Similarity=0.248  Sum_probs=37.0

Q ss_pred             hHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccc
Q psy7108         613 TTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  665 (703)
Q Consensus       613 ~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~  665 (703)
                      +-+.+..+++.-+.+++++||||+|+++++.++..+|+   .++.++.++|..
T Consensus        88 ~~~dl~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lv~~~~~~  137 (313)
T d1azwa_          88 LVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQ---QVTELVLRGIFL  137 (313)
T ss_dssp             HHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGG---GEEEEEEESCCC
T ss_pred             HHHHHHHHHHhhccccceeEEecCCcHHHHHHHHHhhh---ceeeeeEecccc
Confidence            33455566666777889999999999999999998776   455566665543

>d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Ccg1/TafII250-interacting factor B (Cib)
domain: Ccg1/TafII250-interacting factor B (Cib)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.29  E-value=0.016  Score=53.03  Aligned_cols=42  Identities=12%  Similarity=-0.022  Sum_probs=28.6

Q ss_pred             hHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhh
Q psy7108         538 ILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS  582 (703)
Q Consensus       538 i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~  582 (703)
                      +++.-+..++.++|||+||..++....+.|   ++++.++..+|.
T Consensus        95 ~~~~l~~~~~~lvG~S~Gg~~a~~~a~~~p---~~v~~lV~~~p~  136 (208)
T d1imja_          95 VVDALELGPPVVISPSLSGMYSLPFLTAPG---SQLPGFVPVAPI  136 (208)
T ss_dssp             HHHHHTCCSCEEEEEGGGHHHHHHHHTSTT---CCCSEEEEESCS
T ss_pred             cccccccccccccccCcHHHHHHHHHHHhh---hhcceeeecCcc
Confidence            333335578899999999987776555544   356666777664

>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nucleoporin domain
family: Nucleoporin domain
domain: Nucleoporin NUP159
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.02  E-value=2.2  Score=41.77  Aligned_cols=184  Identities=11%  Similarity=0.052  Sum_probs=103.9

Q ss_pred             cCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCC----------CceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEE
Q psy7108          48 GPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVE----------TDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIM  117 (703)
Q Consensus        48 ~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~----------~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~v  117 (703)
                      ...+-++.++  ...+++.|+.++ ++|-....          ....... ..-..|..++|+-|  .+++. .++.+..
T Consensus        37 ~~~~LLAVsn--~~GLl~aa~~~~-l~V~~t~~l~~~~~~~~~~~~~~~~-~~ip~v~~vafs~d--~l~v~-~~~~l~~  109 (381)
T d1xipa_          37 ASLQNLDISN--SKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWE-KEIPDVIFVCFHGD--QVLVS-TRNALYS  109 (381)
T ss_dssp             SCCBCEEEET--TTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEE-EECTTEEEEEEETT--EEEEE-ESSEEEE
T ss_pred             cccceEEEeC--CCCEEEEECCCE-EEEEEHHHHHHHhhccCCCCcceec-cCCCCeEEEEeeCC--EEEEE-eCCCEEE
Confidence            4566789998  777888888775 55655311          1111111 11236888999744  45554 4567888


Q ss_pred             EEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCC
Q psy7108         118 FDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNK  197 (703)
Q Consensus       118 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~  197 (703)
                      ++..+-........-.                    .++..+.++|.  .++....++.+.++++..+.......+....
T Consensus       110 ~~~~~l~~~~~~~~~~--------------------~~~~~~~~~p~--~~~l~~~~~~~~~~~l~~~~~~~~~~~v~~~  167 (381)
T d1xipa_         110 LDLEELSEFRTVTSFE--------------------KPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQLAQNVTSF  167 (381)
T ss_dssp             EESSSTTCEEEEEECS--------------------SCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEEEEESEEEE
T ss_pred             EEeecccccccccccc--------------------ccccceecCCc--eeEEEecCCCEEEEEeccCccccccCCcceE
Confidence            8877654433332221                    26778888874  4666777899999999988654332211111


Q ss_pred             ccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEE
Q psy7108         198 SLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAA  269 (703)
Q Consensus       198 ~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~  269 (703)
                      .   ....+.+++|++.|+.++++.++.     ..++. ++.....+......+..|.++.|-.+..++++-
T Consensus       168 ~---~~~~~~~v~ws~kgkq~v~~~g~~-----~q~k~-~i~~~~~~~~p~~~~~~v~sI~WL~~~~F~vvy  230 (381)
T d1xipa_         168 D---VTNSQLAVLLKDRSFQSFAWRNGE-----MEKQF-EFSLPSELEELPVEEYSPLSVTILSPQDFLAVF  230 (381)
T ss_dssp             E---ECSSEEEEEETTSCEEEEEEETTE-----EEEEE-EECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred             E---ecCCceEEEEeCCcEEEEEeCCCc-----eeecc-CCCCccccCCCcCCCcceeEEEEecCceEEEEE
Confidence            1   123677888998888887754321     11110 111111111111234468889988776665443

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=92.61  E-value=0.27  Score=48.53  Aligned_cols=164  Identities=10%  Similarity=0.033  Sum_probs=91.2

Q ss_pred             EEEEEEecCCCEEEEEECCC-----------eEEEEEcCCCcEEE--EEeccccCCCCCCCCccchhhcccCCccEEEEE
Q psy7108          94 ALCVAYKPDGTEIVVATLDG-----------QLIMFDVESAAQVG--SVEARRDLDSGRLDTDLVTREQSLKAKAVSTVC  160 (703)
Q Consensus        94 V~~v~~spdg~~las~s~dg-----------~I~vwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~  160 (703)
                      +...+...+|+.++.|+.+.           .+.+||..+++-..  ......                   .......+
T Consensus        22 ~~~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~-------------------~~~~~~~~   82 (387)
T d1k3ia3          22 AAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKH-------------------DMFCPGIS   82 (387)
T ss_dssp             SEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSC-------------------CCSSCEEE
T ss_pred             cEEEEEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCc-------------------ccceeEEE
Confidence            34444556788888877531           36789998775321  121111                   11223567


Q ss_pred             EcCCCCEEEEEecC-CcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC
Q psy7108         161 YSADGSCILAAGQS-KYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK  239 (703)
Q Consensus       161 ~spdg~~l~s~s~d-g~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~  239 (703)
                      +.++|+.++.|+.+ ..+.+||..+......-.....       ..-...+..+||+.+++++..........+.+||..
T Consensus        83 ~~~~g~i~v~Gg~~~~~~~~yd~~~~~w~~~~~~~~~-------r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~  155 (387)
T d1k3ia3          83 MDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVA-------RGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPS  155 (387)
T ss_dssp             ECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSC-------CSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETT
T ss_pred             EecCCcEEEeecCCCcceeEecCccCccccccccccc-------ccccceeeecCCceeeeccccccccccceeeeecCC
Confidence            88999999888655 5799999988765332111111       123456778899998887754433333467888877


Q ss_pred             CCcccee---------ecCCcc-----ceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCc
Q psy7108         240 KGDMAAR---------VLKPEV-----RVFCVKFSPTGQAWVAATTEG-VHIYSLDSGY  283 (703)
Q Consensus       240 ~~~~~~~---------~~~h~~-----~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~  283 (703)
                      +.+-...         ...+..     .-..+...++|+.+..++..+ +.+++..+..
T Consensus       156 ~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~  214 (387)
T d1k3ia3         156 SKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGD  214 (387)
T ss_dssp             TTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCE
T ss_pred             CCceeecCCCcccccccccccceeeccceeEEEEeCCCCEEEecCcCCcEEecCcccCc
Confidence            6532110         000100     011122345677666666666 6666665543

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=92.36  E-value=1.1  Score=46.87  Aligned_cols=50  Identities=10%  Similarity=0.068  Sum_probs=36.3

Q ss_pred             CCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEE
Q psy7108         164 DGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLI  220 (703)
Q Consensus       164 dg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~  220 (703)
                      .|..+++|+.|+.++.+|.++|+.+-++......  .+     .-+.+..+|+.+++
T Consensus       487 agglVF~G~~dg~l~A~Da~TGe~LW~~~~~~~~--~~-----~P~ty~~~GkQYv~  536 (573)
T d1kb0a2         487 AGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGV--VA-----APSTYMVDGRQYVS  536 (573)
T ss_dssp             TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCC--CS-----CCEEEEETTEEEEE
T ss_pred             cCCEEEEECCCCeEEEEECCCCcEeEEEECCCCc--cc-----cCEEEEECCEEEEE
Confidence            5678888999999999999999999888755431  11     12456678875443

>d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Proline iminopeptidase-like
domain: Proline iminopeptidase
species: Xanthomonas campestris, pv. citri [TaxId: 339]

Probab=92.29  E-value=0.013  Score=57.02  Aligned_cols=33  Identities=21%  Similarity=0.331  Sum_probs=23.9

Q ss_pred             HHhHccCCCcceEEEEEecCceeeeeccCCCch
Q psy7108         536 DYILNQTGHNSLITLGHSLGTTNVLIAGSLRPE  568 (703)
Q Consensus       536 ~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~  568 (703)
                      .-+++.-+.++..++|||+||..++..+.+.|+
T Consensus        93 ~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~  125 (313)
T d1azwa_          93 ERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQ  125 (313)
T ss_dssp             HHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGG
T ss_pred             HHHHHhhccccceeEEecCCcHHHHHHHHHhhh
Confidence            344444456789999999999888777666554

>d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Epoxide hydrolase
domain: Mammalian epoxide hydrolase, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.14  E-value=0.011  Score=57.31  Aligned_cols=33  Identities=24%  Similarity=0.368  Sum_probs=23.4

Q ss_pred             HHhHccCCCcceEEEEEecCceeeeeccCCCch
Q psy7108         536 DYILNQTGHNSLITLGHSLGTTNVLIAGSLRPE  568 (703)
Q Consensus       536 ~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~  568 (703)
                      ..+++.-+.+++.++|||+||..++..+.+.|+
T Consensus        92 ~~l~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~  124 (322)
T d1zd3a2          92 VTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPE  124 (322)
T ss_dssp             HHHHHHHTCSCEEEEEETHHHHHHHHHHHHCTT
T ss_pred             hhhhhcccccccccccccchHHHHHHHHHhCCc
Confidence            334444456789999999999887766655554

>d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: 2,6-dihydropseudooxynicotine hydrolase-like
domain: 2,6-dihydropseudooxynicotine hydrolase
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=91.79  E-value=0.0077  Score=60.51  Aligned_cols=48  Identities=21%  Similarity=0.436  Sum_probs=33.5

Q ss_pred             hhhHHHhHccCC--CcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108         532 TATIDYILNQTG--HNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  583 (703)
Q Consensus       532 ~~~~~~i~~~~~--~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~  583 (703)
                      .++++|+...+.  ..+++++|||+||+.++.+.+..|    +++..++++|..
T Consensus       187 ~~v~d~l~~~~~vd~~rI~l~G~S~GG~~Al~~A~~~p----ri~a~V~~~~~~  236 (360)
T d2jbwa1         187 SAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEP----RLAACISWGGFS  236 (360)
T ss_dssp             HHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT----TCCEEEEESCCS
T ss_pred             HHHHHHHHhcccccccceeehhhhcccHHHHHHhhcCC----CcceEEEEcccc
Confidence            456788887764  468999999999987776554333    456666666543

>d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Haloalkane dehalogenase
domain: Haloalkane dehalogenase
species: Xanthobacter autotrophicus [TaxId: 280]

Probab=91.54  E-value=0.018  Score=55.76  Aligned_cols=41  Identities=7%  Similarity=0.092  Sum_probs=28.8

Q ss_pred             HccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhh
Q psy7108         539 LNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS  582 (703)
Q Consensus       539 ~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~  582 (703)
                      ++.-+.+++.++|||+||..++....+.|+   +|+.++..+|.
T Consensus       110 l~~l~~~~~~lvGhS~Gg~ia~~~A~~~P~---~V~~lvl~~~~  150 (310)
T d1b6ga_         110 IERLDLRNITLVVQDWGGFLGLTLPMADPS---RFKRLIIMNAC  150 (310)
T ss_dssp             HHHHTCCSEEEEECTHHHHHHTTSGGGSGG---GEEEEEEESCC
T ss_pred             hhhccccccccccceecccccccchhhhcc---ccceEEEEcCc
Confidence            333355789999999999988887776665   56665655443

>d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Bacterial lipase
domain: Lipase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.33  E-value=0.063  Score=51.50  Aligned_cols=48  Identities=17%  Similarity=0.318  Sum_probs=39.1

Q ss_pred             chHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecc
Q psy7108         612 DTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWA  662 (703)
Q Consensus       612 d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~  662 (703)
                      ++.+.|+-++...+.+++++||||||+..+..+++.+|+   +|+.++.++
T Consensus        59 ~l~~~i~~~~~~~g~~~v~ligHS~GG~~~r~~~~~~p~---~v~~lv~i~  106 (285)
T d1ex9a_          59 QLLQQVEEIVALSGQPKVNLIGHSHGGPTIRYVAAVRPD---LIASATSVG  106 (285)
T ss_dssp             HHHHHHHHHHHHHCCSCEEEEEETTHHHHHHHHHHHCGG---GEEEEEEES
T ss_pred             HHHHHHHHHHHHcCCCeEEEEEECccHHHHHHHHHHCCc---cceeEEEEC
Confidence            355677778888999999999999999999998888776   466666665

>d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Carbon-carbon bond hydrolase
domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD)
species: Rhodococcus sp., strain rha1 [TaxId: 1831]

Probab=91.11  E-value=0.087  Score=49.51  Aligned_cols=49  Identities=20%  Similarity=0.134  Sum_probs=38.1

Q ss_pred             hhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccccCCCCCh
Q psy7108         622 NQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLGNLVTR  673 (703)
Q Consensus       622 ~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~~~~~~~  673 (703)
                      +..+.++++++|||+|+.+++.++..+|+   +++.+++++|+........+
T Consensus        95 ~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvli~~~~~~~~~~~~  143 (281)
T d1c4xa_          95 NHFGIEKSHIVGNSMGGAVTLQLVVEAPE---RFDKVALMGSVGAPMNARPP  143 (281)
T ss_dssp             HHHTCSSEEEEEETHHHHHHHHHHHHCGG---GEEEEEEESCCSSCCSSCCH
T ss_pred             cccccccceeccccccccccccccccccc---cccceEEeccccCccccchh
Confidence            44456789999999999999999988775   57888999987665554443

>d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: PepX catalytic domain-like
domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain
species: Lactococcus lactis [TaxId: 1358]

Probab=91.10  E-value=0.027  Score=57.38  Aligned_cols=50  Identities=24%  Similarity=0.210  Sum_probs=34.3

Q ss_pred             CCchhhHHHhHccCC----------------CcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhh
Q psy7108         529 YDTTATIDYILNQTG----------------HNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQ  581 (703)
Q Consensus       529 ~d~~~~~~~i~~~~~----------------~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p  581 (703)
                      .|..++|+|+.....                ..+++++|+|+||+..|++++.+|.   ++++.+..++
T Consensus       163 ~D~~~~IeWl~~~~~~~~~~~~~~~~~q~WsnGkVGm~G~SY~G~~q~~aA~~~pp---~LkAivp~~~  228 (405)
T d1lnsa3         163 YSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYLGTMAYGAATTGVE---GLELILAEAG  228 (405)
T ss_dssp             HHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETHHHHHHHHHHTTTCT---TEEEEEEESC
T ss_pred             hhHHHHHHHHHhcccccccccccccccccccCCeeEEEecCHHHHHHHHHHhcCCc---cceEEEecCc
Confidence            466778999976431                2489999999999888887776543   3444444433

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=90.73  E-value=1.5  Score=45.84  Aligned_cols=50  Identities=14%  Similarity=0.183  Sum_probs=36.0

Q ss_pred             CCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEE
Q psy7108         164 DGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLI  220 (703)
Q Consensus       164 dg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~  220 (703)
                      .+.++++|+.||.++.+|.++|+.+-++......       .-.-+.+..+|+.+++
T Consensus       468 agglVF~G~~dg~l~A~Da~tGe~LW~~~l~~~~-------~~~P~ty~~dGkqyv~  517 (560)
T d1kv9a2         468 AGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGI-------VAAPMTFELAGRQYVA  517 (560)
T ss_dssp             TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCC-------CSCCEEEEETTEEEEE
T ss_pred             CCCEEEEECCCCcEEEEECCCCcEeEEEECCCCc-------cccCEEEEECCEEEEE
Confidence            4667888999999999999999999888755431       1122456678875443

>d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Thioesterases
domain: Palmitoyl protein thioesterase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.66  E-value=0.044  Score=50.72  Aligned_cols=46  Identities=11%  Similarity=-0.007  Sum_probs=35.3

Q ss_pred             HHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccc
Q psy7108         617 IDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  665 (703)
Q Consensus       617 i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~  665 (703)
                      +..+++..+ ++++++|||+|+.+++.++..+|+.  +|+.++.+++..
T Consensus        60 l~~~l~~l~-~~~~lvGhS~GG~ia~~~a~~~p~~--~v~~lvl~~~~~  105 (268)
T d1pjaa_          60 VVPIMAKAP-QGVHLICYSQGGLVCRALLSVMDDH--NVDSFISLSSPQ  105 (268)
T ss_dssp             HHHHHHHCT-TCEEEEEETHHHHHHHHHHHHCTTC--CEEEEEEESCCT
T ss_pred             HHHHHhccC-CeEEEEccccHHHHHHHHHHHCCcc--ccceEEEECCCC
Confidence            344455666 7899999999999999999987763  477777777643

>d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Proline iminopeptidase-like
domain: Tricorn interacting factor F1
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=90.24  E-value=0.097  Score=48.92  Aligned_cols=38  Identities=13%  Similarity=0.193  Sum_probs=30.3

Q ss_pred             CCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccc
Q psy7108         625 GHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  665 (703)
Q Consensus       625 ~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~  665 (703)
                      +.++++.||||+|+.++..++..+|+   +|+.++.++|+.
T Consensus        92 ~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~  129 (290)
T d1mtza_          92 GNEKVFLMGSSYGGALALAYAVKYQD---HLKGLIVSGGLS  129 (290)
T ss_dssp             TTCCEEEEEETHHHHHHHHHHHHHGG---GEEEEEEESCCS
T ss_pred             cccccceecccccchhhhhhhhcChh---hheeeeeccccc
Confidence            55789999999999999988887664   567777777654

>d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: PepX catalytic domain-like
domain: Bacterial cocaine esterase N-terminal domain
species: Rhodococcus sp. mb1 [TaxId: 51612]

Probab=89.97  E-value=0.031  Score=55.36  Aligned_cols=38  Identities=21%  Similarity=0.146  Sum_probs=30.4

Q ss_pred             CchhhHHHhHccCCC-cceEEEEEecCceeeeeccCCCc
Q psy7108         530 DTTATIDYILNQTGH-NSLITLGHSLGTTNVLIAGSLRP  567 (703)
Q Consensus       530 d~~~~~~~i~~~~~~-~~~~~~g~S~G~~~~~~~~~~~~  567 (703)
                      |..++++|+...+.. .+++++|+|+||+..+++++..+
T Consensus        89 d~~d~i~w~~~q~~~~grVg~~G~SygG~~~~~~A~~~~  127 (347)
T d1ju3a2          89 DAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGV  127 (347)
T ss_dssp             HHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCC
T ss_pred             hHHHHHHHHHhhccCCcceEeeeccccccchhhhhhccc
Confidence            456688999988753 59999999999988887766554

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=89.92  E-value=12  Score=38.45  Aligned_cols=206  Identities=7%  Similarity=-0.050  Sum_probs=114.1

Q ss_pred             CCcEEEEEcCCCceeEEEecCC-------------------------------------CcE-EEEEEecCCCEEEEEEC
Q psy7108          70 DKTVKLWNAVETDTQHETIQLL-------------------------------------SDA-LCVAYKPDGTEIVVATL  111 (703)
Q Consensus        70 Dg~V~iWd~~~~~~~~~~~~~~-------------------------------------~~V-~~v~~spdg~~las~s~  111 (703)
                      +|.|+-+|+.+++.+.......                                     ..+ ...++.++...+..+..
T Consensus       175 ~G~v~a~D~~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gg~vW~~~s~D~~~g~~y~~tg  254 (571)
T d2ad6a1         175 RGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSG  254 (571)
T ss_dssp             CCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECC
T ss_pred             cCcEEEEECCCCcEEEEEeccCCcccccccccccccccccCcccccccccCCcccccCCCccccccccchhcCeeeeecc
Confidence            6789999999998776543221                                     112 22466677666665544


Q ss_pred             ----------------CCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCC---EEEEEe
Q psy7108         112 ----------------DGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGS---CILAAG  172 (703)
Q Consensus       112 ----------------dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~---~l~s~s  172 (703)
                                      ...+.-.|+++|+.+-.++....-        .+..  .... .........+++   .++.++
T Consensus       255 ~~~p~~~~~r~g~n~~s~svvAld~~TG~~~W~~q~~~~D--------~Wd~--D~~~-~~~l~~~~~~g~~~~~v~~~~  323 (571)
T d2ad6a1         255 NPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHD--------EWDF--AGVN-QMVLTDQPVNGKMTPLLSHID  323 (571)
T ss_dssp             CCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTC--------SSCC--CCCC-CCEEEEEEETTEEEEEEEEEC
T ss_pred             cccCccccccccccccccceeeeeccchhheecccccCcc--------cccc--cccc-ccceeeeeccCccccceeecc
Confidence                            245788899999988777643210        0000  0000 111122223443   456778


Q ss_pred             cCCcEEEEECCCCceEEEEEeccCCc---------------------------------cccccccceeeeeccCCCEEE
Q psy7108         173 QSKYICIYSSREGILLKKFTITQNKS---------------------------------LDGINDFINRRKMTEFGNVSL  219 (703)
Q Consensus       173 ~dg~I~lwD~~~~~~~~~~~~~~~~~---------------------------------~~~~~~~v~~~~~spdg~~l~  219 (703)
                      .+|.+.++|..+++.+..........                                 ..++  .-...+++|+...++
T Consensus       324 k~G~l~vlDr~tG~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~p~~~Gg~--~w~~~a~dP~~~~~y  401 (571)
T d2ad6a1         324 RNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFH--NQGVDSYDPESRTLY  401 (571)
T ss_dssp             TTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSS--CSCBCEEETTTTEEE
T ss_pred             ccceEEEEecCCCcEeeeeccCCcccccccccccccccccCcccccccccCceEEEecccccc--ccccceECCCCceEE
Confidence            99999999999999875443221100                                 0000  012356777777666


Q ss_pred             EEcccCC-------------------------------CCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEE
Q psy7108         220 IETRETH-------------------------------EGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVA  268 (703)
Q Consensus       220 ~~~~~~~-------------------------------~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s  268 (703)
                      +......                               ......+.-+|+.+|+.+-+.......... ..+-.+..+++
T Consensus       402 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~AiD~~TG~~~W~~~~~~~~~~g-~l~TagglVf~  480 (571)
T d2ad6a1         402 AGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGG-TLYTKGGLVWY  480 (571)
T ss_dssp             EEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSB-CEEETTTEEEE
T ss_pred             EeccccccccccccccccCCccccccceeeccccCCcccCCcccEEEeccCCCceeeEcCCCCCCCcc-eeEecCCEEEE
Confidence            5432210                               001125666777777765443321111111 11224567778


Q ss_pred             EeCCC-EEEEEcCCCceeccee
Q psy7108         269 ATTEG-VHIYSLDSGYVFDPFL  289 (703)
Q Consensus       269 ~s~Dg-v~iwd~~~~~~~~~~~  289 (703)
                      ++.|+ ++.+|.++|+.+-.+.
T Consensus       481 G~~dg~l~A~Da~tGe~lW~~~  502 (571)
T d2ad6a1         481 ATLDGYLKALDNKDGKELWNFK  502 (571)
T ss_dssp             ECTTSEEEEEETTTCCEEEEEE
T ss_pred             ECCCCeEEEEECCCCcEEEEEE
Confidence            99999 9999999999876655

>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: Serum paraoxonase/arylesterase 1, PON1
domain: Serum paraoxonase/arylesterase 1, PON1
species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=89.83  E-value=8.8  Score=36.65  Aligned_cols=188  Identities=13%  Similarity=0.129  Sum_probs=99.6

Q ss_pred             EEEEEcCCCCCCEEEEEeC------------CCcEEEEEcCCCceeEEEec-CC-------CcEEEEEE--ecCCC-EEE
Q psy7108          51 SCIEFSPVLSSTGMVSASW------------DKTVKLWNAVETDTQHETIQ-LL-------SDALCVAY--KPDGT-EIV  107 (703)
Q Consensus        51 ~~l~~sp~~dg~~L~sgs~------------Dg~V~iWd~~~~~~~~~~~~-~~-------~~V~~v~~--spdg~-~la  107 (703)
                      -++...|  +|..+++++.            .|.+.++|+.+......... ..       -....+..  .++|+ +|+
T Consensus        38 EDi~~~~--dg~~~issg~~~~~~~~~~~~~~G~i~~~dl~~~~~~~~~l~~~~~~~~~~~f~PhGi~l~~~~dg~~~L~  115 (340)
T d1v04a_          38 EDLEILP--NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL  115 (340)
T ss_dssp             CEEEECT--TSEEEEEECCCC--------CCCCEEEEEETTSSSCCEEECEEECSSSCGGGCCEEEEEEEECTTCCEEEE
T ss_pred             ceEEECC--CCcEEEEecCccCCCCCCCCCCCCeEEEEecCCCCCcceEEEecCCCCCCcceeccceeEEEcCCCcEEEE
Confidence            4578888  8887776642            38888999876543222211 11       12344443  44565 344


Q ss_pred             EEE---CCCeEEEEEcCCCc-EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe---cC------
Q psy7108         108 VAT---LDGQLIMFDVESAA-QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG---QS------  174 (703)
Q Consensus       108 s~s---~dg~I~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s---~d------  174 (703)
                      +..   ...+|-++++.... .+.....-..                ......++++...+|.+++|-.   .+      
T Consensus       116 vvnH~~~~~~ieif~~~~~~~~l~~~~~v~~----------------~~~~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~  179 (340)
T d1v04a_         116 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRH----------------KLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSW  179 (340)
T ss_dssp             EEECSTTCCEEEEEEEETTTTEEEEEEEECC----------------TTCSSEEEEEEEETTEEEEEESCSCCSHHHHHH
T ss_pred             EEeccCCCceeEEEEEeCCCCeEEEEeecCC----------------ccccCccceEEecCCCEEEecCccCcChhhhhh
Confidence            443   34567777775332 2211111110                0122578899988898877721   11      


Q ss_pred             ------CcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcccee--
Q psy7108         175 ------KYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAAR--  246 (703)
Q Consensus       175 ------g~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~--  246 (703)
                            ++..+|....++.......         ....+.++++||++.++++....     ..|+.|++........  
T Consensus       180 e~~~~~~~g~v~~~~~~~~~~~~~~---------l~~pNGI~~s~d~~~lyVa~t~~-----~~i~~y~~~~~~~l~~~~  245 (340)
T d1v04a_         180 EMHLGLAWSFVTYYSPNDVRVVAEG---------FDFANGINISPDGKYVYIAELLA-----HKIHVYEKHANWTLTPLR  245 (340)
T ss_dssp             HHHTTCCCEEEEEECSSCEEEEEEE---------ESSEEEEEECTTSSEEEEEEGGG-----TEEEEEEECTTSCEEEEE
T ss_pred             hHhhcCCceeEEEEcCCceEEEcCC---------CCccceeEECCCCCEEEEEeCCC-----CeEEEEEeCCCcccceEE
Confidence                  2333444333333222111         12568899999999888876543     3688777654322211  


Q ss_pred             ecCCccceEEEEEcC-CCCEEEEEe
Q psy7108         247 VLKPEVRVFCVKFSP-TGQAWVAAT  270 (703)
Q Consensus       247 ~~~h~~~V~~l~~sp-dg~~l~s~s  270 (703)
                      ...-...+-.+.+.+ +|.+.+++.
T Consensus       246 ~~~l~~~pDNi~~d~~~g~lwva~~  270 (340)
T d1v04a_         246 VLSFDTLVDNISVDPVTGDLWVGCH  270 (340)
T ss_dssp             EEECSSEEEEEEECTTTCCEEEEEE
T ss_pred             EecCCCCCCccEEecCCCEEEEEEC
Confidence            112234466777776 455544443

>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: Serum paraoxonase/arylesterase 1, PON1
domain: Serum paraoxonase/arylesterase 1, PON1
species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=89.79  E-value=4.5  Score=38.85  Aligned_cols=116  Identities=11%  Similarity=0.026  Sum_probs=63.1

Q ss_pred             cCCCCE-EEEEe---cCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCC----------
Q psy7108         162 SADGSC-ILAAG---QSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHE----------  227 (703)
Q Consensus       162 spdg~~-l~s~s---~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~----------  227 (703)
                      .++|+. |++..   ...+|.++++.......++.....   .......+.+++..+|..+++.......          
T Consensus       107 ~~dg~~~L~vvnH~~~~~~ieif~~~~~~~~l~~~~~v~---~~~~~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e~~~  183 (340)
T d1v04a_         107 DDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR---HKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHL  183 (340)
T ss_dssp             CTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC---CTTCSSEEEEEEEETTEEEEEESCSCCSHHHHHHHHHT
T ss_pred             cCCCcEEEEEEeccCCCceeEEEEEeCCCCeEEEEeecC---CccccCccceEEecCCCEEEecCccCcChhhhhhhHhh
Confidence            456663 44443   345788888754332212211111   1122356889999999877774321100          


Q ss_pred             -CCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC--EEEEEcCCCc
Q psy7108         228 -GGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG--VHIYSLDSGY  283 (703)
Q Consensus       228 -~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg--v~iwd~~~~~  283 (703)
                       .....+..||....+   .....-...+.++++||+++|+.+...+  |++|++....
T Consensus       184 ~~~~g~v~~~~~~~~~---~~~~~l~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~~  239 (340)
T d1v04a_         184 GLAWSFVTYYSPNDVR---VVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANW  239 (340)
T ss_dssp             TCCCEEEEEECSSCEE---EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTS
T ss_pred             cCCceeEEEEcCCceE---EEcCCCCccceeEECCCCCEEEEEeCCCCeEEEEEeCCCc
Confidence             011234445543222   2222234578899999999986665544  9999987544

>d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Carbon-carbon bond hydrolase
domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD)
species: Burkholderia xenovorans [TaxId: 36873]

Probab=89.74  E-value=0.026  Score=53.50  Aligned_cols=37  Identities=14%  Similarity=0.202  Sum_probs=26.2

Q ss_pred             CCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhh
Q psy7108         543 GHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS  582 (703)
Q Consensus       543 ~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~  582 (703)
                      +.+++.++|||+||..++..+.+.|   ++++..+..+|.
T Consensus        99 ~~~~~~lvGhS~Gg~ia~~~a~~~p---~~v~~lil~~~~  135 (283)
T d2rhwa1          99 DIDRAHLVGNAMGGATALNFALEYP---DRIGKLILMGPG  135 (283)
T ss_dssp             TCCCEEEEEETHHHHHHHHHHHHCG---GGEEEEEEESCS
T ss_pred             cccccccccccchHHHHHHHHHHhh---hhcceEEEeCCC
Confidence            4578999999999987776666554   355555555554

>d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Aclacinomycin methylesterase RdmC
domain: Aclacinomycin methylesterase RdmC
species: Streptomyces purpurascens [TaxId: 1924]

Probab=89.66  E-value=0.076  Score=50.31  Aligned_cols=48  Identities=15%  Similarity=0.142  Sum_probs=37.3

Q ss_pred             HHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccc
Q psy7108         615 ATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  665 (703)
Q Consensus       615 a~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~  665 (703)
                      +.+..++...+.++++++|||+|+.+++.++..+|+   +|+.+++++|..
T Consensus        81 ~d~~~ll~~l~~~~~~lvGhS~Gg~~a~~~a~~~P~---~v~~lvli~~~~  128 (297)
T d1q0ra_          81 ADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHD---RLSSLTMLLGGG  128 (297)
T ss_dssp             HHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGG---GEEEEEEESCCC
T ss_pred             hhhccccccccccceeeccccccchhhhhhhccccc---ceeeeEEEcccc
Confidence            445556677788899999999999999998888775   566677766543

>d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Bacterial lipase
domain: Lipase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.50  E-value=0.026  Score=54.36  Aligned_cols=38  Identities=21%  Similarity=0.448  Sum_probs=28.1

Q ss_pred             chhhHHHhHccCCCcceEEEEEecCceeeeeccCCCch
Q psy7108         531 TTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPE  568 (703)
Q Consensus       531 ~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~  568 (703)
                      +.+.++-++...+.+++.++|||+||.++....++.|+
T Consensus        60 l~~~i~~~~~~~g~~~v~ligHS~GG~~~r~~~~~~p~   97 (285)
T d1ex9a_          60 LLQQVEEIVALSGQPKVNLIGHSHGGPTIRYVAAVRPD   97 (285)
T ss_dssp             HHHHHHHHHHHHCCSCEEEEEETTHHHHHHHHHHHCGG
T ss_pred             HHHHHHHHHHHcCCCeEEEEEECccHHHHHHHHHHCCc
Confidence            34445556666677899999999999988776665554

>d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Haloperoxidase
domain: Bromoperoxidase A1
species: Streptomyces aureofaciens [TaxId: 1894]

Probab=89.45  E-value=0.034  Score=52.04  Aligned_cols=42  Identities=17%  Similarity=0.190  Sum_probs=28.9

Q ss_pred             HhhCCCCceEEEEeChhHHHHHHHhcC-CchHHHHHHHheeccccc
Q psy7108         621 LNQTGHNSLITLGHSLGTTNVLIAGSL-RPEYQTKVRLNVLWAQSA  665 (703)
Q Consensus       621 ~~~t~~~~~~~vg~s~g~~~~~~~~s~-~~~~~~~i~~~~~l~p~~  665 (703)
                      +..-+..+++++|||+|+.+...+++. .|+   +|+.++.+++..
T Consensus        80 l~~l~~~~~~lvGhS~Gg~~~~~~~a~~~p~---~v~~~~~~~~~~  122 (274)
T d1a8qa_          80 LTDLDLRDVTLVAHSMGGGELARYVGRHGTG---RLRSAVLLSAIP  122 (274)
T ss_dssp             HHHTTCCSEEEEEETTHHHHHHHHHHHHCST---TEEEEEEESCCC
T ss_pred             HHHhhhhhhcccccccccchHHHHHHHhhhc---cceeEEEEeccC
Confidence            344456789999999999887776654 344   466667776543

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=89.39  E-value=2.2  Score=44.51  Aligned_cols=50  Identities=14%  Similarity=0.153  Sum_probs=36.5

Q ss_pred             CCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEE
Q psy7108         164 DGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLI  220 (703)
Q Consensus       164 dg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~  220 (703)
                      .+..+++++.|+.++.+|.++|+.+-.+......       .-.-+.+..||+.+++
T Consensus       474 agglVf~G~~dg~l~A~Da~tGe~lW~~~l~~~~-------~a~P~ty~~dGkqYi~  523 (571)
T d2ad6a1         474 KGGLVWYATLDGYLKALDNKDGKELWNFKMPSGG-------IGSPMTYSFKGKQYIG  523 (571)
T ss_dssp             TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCC-------CSCCEEEEETTEEEEE
T ss_pred             cCCEEEEECCCCeEEEEECCCCcEEEEEECCCCc-------eecceEEEECCEEEEE
Confidence            3567778999999999999999999888755431       1223566678875543

>d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Hydroxynitrile lyase-like
domain: Hydroxynitrile lyase
species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]

Probab=88.99  E-value=0.038  Score=50.71  Aligned_cols=42  Identities=21%  Similarity=0.277  Sum_probs=26.9

Q ss_pred             HHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhh
Q psy7108         536 DYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWA  580 (703)
Q Consensus       536 ~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~  580 (703)
                      +++......+++.++|||+||..++.+..+.   .++++..+..+
T Consensus        62 ~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~---p~~v~~lvl~~  103 (256)
T d3c70a1          62 TFLEALPPGEKVILVGESCGGLNIAIAADKY---CEKIAAAVFHN  103 (256)
T ss_dssp             HHHHHSCTTCCEEEEEETTHHHHHHHHHHHH---GGGEEEEEEES
T ss_pred             hhhhhhccccceeecccchHHHHHHHHhhcC---chhhhhhheec
Confidence            3444444567899999999998777655433   34455555444

>d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Carbon-carbon bond hydrolase
domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD)
species: Rhodococcus sp., strain rha1 [TaxId: 1831]

Probab=88.97  E-value=0.012  Score=55.98  Aligned_cols=38  Identities=18%  Similarity=0.188  Sum_probs=26.8

Q ss_pred             CCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108         543 GHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  583 (703)
Q Consensus       543 ~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~  583 (703)
                      +.+++.++|||+||..++..+.+.|   ++++.++..+|..
T Consensus        98 ~~~~~~lvGhS~Gg~ia~~~a~~~p---~~v~~lvli~~~~  135 (281)
T d1c4xa_          98 GIEKSHIVGNSMGGAVTLQLVVEAP---ERFDKVALMGSVG  135 (281)
T ss_dssp             TCSSEEEEEETHHHHHHHHHHHHCG---GGEEEEEEESCCS
T ss_pred             ccccceecccccccccccccccccc---ccccceEEecccc
Confidence            4568999999999988777666554   4555556555543

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.97  E-value=7.4  Score=40.35  Aligned_cols=79  Identities=10%  Similarity=0.016  Sum_probs=50.1

Q ss_pred             CcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccc-
Q psy7108         175 KYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVR-  253 (703)
Q Consensus       175 g~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~-  253 (703)
                      |.|.-+|+.+++.+-.+..+.         ++.+-..+..|..+++++.++      .++-+|.++|+.+-++.-.... 
T Consensus       466 G~l~AiD~~TG~i~W~~~~~~---------p~~~g~lstagglVF~Gt~dg------~l~A~Da~TGe~LW~~~~~~~~~  530 (582)
T d1flga_         466 GSLRAMDPVSGKVVWEHKEHL---------PLWAGVLATAGNLVFTGTGDG------YFKAFDAKSGKELWKFQTGSGIV  530 (582)
T ss_dssp             EEEEEECTTTCCEEEEEEESS---------CCCSCCEEETTTEEEEECTTS------EEEEEETTTCCEEEEEECSSCCC
T ss_pred             CeEEEEcCCCCcEEeecCCCC---------CCccceeEEcCCeEEEeCCCC------eEEEEECCCCcEeEEEECCCCcc
Confidence            568889999998877765432         222223455667777765543      8999999999988766542211 


Q ss_pred             eEEEEEcCCCC-EEEE
Q psy7108         254 VFCVKFSPTGQ-AWVA  268 (703)
Q Consensus       254 V~~l~~spdg~-~l~s  268 (703)
                      -.-+.+..+|+ +++.
T Consensus       531 ~~P~ty~~~G~qYv~i  546 (582)
T d1flga_         531 SPPITWEQDGEQYLGV  546 (582)
T ss_dssp             SCCEEEEETTEEEEEE
T ss_pred             ccCEEEEECCEEEEEE
Confidence            11155667885 4543

>d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: DPP6 catalytic domain-like
domain: Dipeptidyl peptidase IV/CD26, C-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=88.87  E-value=0.032  Score=52.54  Aligned_cols=40  Identities=10%  Similarity=-0.026  Sum_probs=30.0

Q ss_pred             CCchhhHHHhHccCC--CcceEEEEEecCceeeeeccCCCch
Q psy7108         529 YDTTATIDYILNQTG--HNSLITLGHSLGTTNVLIAGSLRPE  568 (703)
Q Consensus       529 ~d~~~~~~~i~~~~~--~~~~~~~g~S~G~~~~~~~~~~~~~  568 (703)
                      .|..++++|+.+...  .++++++|+|+||..+++.....|+
T Consensus        96 ~~~~~~~~~~~~~~~id~~~i~i~G~S~GG~~~~~~~~~~~~  137 (258)
T d2bgra2          96 EDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSG  137 (258)
T ss_dssp             HHHHHHHHHHTTSSSEEEEEEEEEEETHHHHHHHHHHTTTCS
T ss_pred             HHHHHHHHHhhhhcccccccccccCcchhhcccccccccCCC
Confidence            345677888887764  3679999999999877766665554

>d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Ccg1/TafII250-interacting factor B (Cib)
domain: Ccg1/TafII250-interacting factor B (Cib)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.81  E-value=0.071  Score=48.38  Aligned_cols=48  Identities=10%  Similarity=-0.053  Sum_probs=37.4

Q ss_pred             HHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccc
Q psy7108         616 TIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF  666 (703)
Q Consensus       616 ~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~  666 (703)
                      .+..+++..+..+++.+|||+|+.+++.++..+|+   +++.+|+++|+..
T Consensus        91 ~l~~~~~~l~~~~~~lvG~S~Gg~~a~~~a~~~p~---~v~~lV~~~p~~~  138 (208)
T d1imja_          91 FLAAVVDALELGPPVVISPSLSGMYSLPFLTAPGS---QLPGFVPVAPICT  138 (208)
T ss_dssp             HHHHHHHHHTCCSCEEEEEGGGHHHHHHHHTSTTC---CCSEEEEESCSCG
T ss_pred             hhhhcccccccccccccccCcHHHHHHHHHHHhhh---hcceeeecCcccc
Confidence            34445555666789999999999999999998775   5677888888753

>d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Proline iminopeptidase-like
domain: Tricorn interacting factor F1
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=88.73  E-value=0.035  Score=52.27  Aligned_cols=33  Identities=15%  Similarity=0.243  Sum_probs=22.3

Q ss_pred             CCcceEEEEEecCceeeeeccCCCchhhhhHHHhhh
Q psy7108         543 GHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVL  578 (703)
Q Consensus       543 ~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~  578 (703)
                      +.+++.++|||+||..++..+.+.|   ++++.++.
T Consensus        92 ~~~~~~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl  124 (290)
T d1mtza_          92 GNEKVFLMGSSYGGALALAYAVKYQ---DHLKGLIV  124 (290)
T ss_dssp             TTCCEEEEEETHHHHHHHHHHHHHG---GGEEEEEE
T ss_pred             cccccceecccccchhhhhhhhcCh---hhheeeee
Confidence            4568999999999987776555433   34444443

>d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Epoxide hydrolase
domain: Bacterial epoxide hydrolase
species: Agrobacterium radiobacter [TaxId: 358]

Probab=88.47  E-value=0.047  Score=51.55  Aligned_cols=42  Identities=12%  Similarity=0.171  Sum_probs=27.4

Q ss_pred             HhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhh
Q psy7108         537 YILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQ  581 (703)
Q Consensus       537 ~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p  581 (703)
                      -+++.-+..+..++|||+||+.++..+.+.|+   ++...+..+|
T Consensus        90 ~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~  131 (293)
T d1ehya_          90 ALLDALGIEKAYVVGHDFAAIVLHKFIRKYSD---RVIKAAIFDP  131 (293)
T ss_dssp             HHHHHTTCCCEEEEEETHHHHHHHHHHHHTGG---GEEEEEEECC
T ss_pred             hhhhhcCccccccccccccccchhcccccCcc---ccceeeeeec
Confidence            34444456789999999999887776655443   4444444443

>d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Hypothetical protein VC1974
domain: Hypothetical protein VC1974
species: Vibrio cholerae [TaxId: 666]

Probab=88.38  E-value=0.047  Score=50.13  Aligned_cols=27  Identities=22%  Similarity=0.192  Sum_probs=19.9

Q ss_pred             CCCcceEEEEEecCceeeeeccCCCch
Q psy7108         542 TGHNSLITLGHSLGTTNVLIAGSLRPE  568 (703)
Q Consensus       542 ~~~~~~~~~g~S~G~~~~~~~~~~~~~  568 (703)
                      ....++.++|||+||..++....+.|+
T Consensus        81 ~~~~~~~lvGhS~Gg~ia~~~a~~~~~  107 (264)
T d1r3da_          81 TSEVPVILVGYSLGGRLIMHGLAQGAF  107 (264)
T ss_dssp             CTTSEEEEEEETHHHHHHHHHHHHTTT
T ss_pred             cccCceeeeeecchHHHHHHHHHhCch
Confidence            345789999999999877665554443

>d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Acylamino-acid-releasing enzyme, C-terminal donain
domain: Acylamino-acid-releasing enzyme, C-terminal donain
species: Aeropyrum pernix [TaxId: 56636]

Probab=88.06  E-value=0.026  Score=53.33  Aligned_cols=40  Identities=25%  Similarity=0.297  Sum_probs=31.8

Q ss_pred             cCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCc
Q psy7108         528 LYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRP  567 (703)
Q Consensus       528 ~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~  567 (703)
                      +.|+.++++|+.......++.++|+|+||+.++.++...+
T Consensus        99 ~~D~~~~~~~l~~~~~~~~~~i~g~s~gg~~~~~~~~~~~  138 (260)
T d2hu7a2          99 LEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTMKP  138 (260)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHHHHST
T ss_pred             hhhhcccccccccccccceeeccccccccccccchhccCC
Confidence            4477889999998877789999999999987766555433

>d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Haloperoxidase
domain: Bromoperoxidase A2
species: Streptomyces aureofaciens [TaxId: 1894]

Probab=88.04  E-value=0.048  Score=51.02  Aligned_cols=17  Identities=29%  Similarity=0.479  Sum_probs=15.1

Q ss_pred             ccccceeecccCccccc
Q psy7108         425 RGYDIWLWNARGNVYSR  441 (703)
Q Consensus       425 ~~~~~~~~~~~~~~~~~  441 (703)
                      +||.|+..|.||...|.
T Consensus        49 ~g~~vi~~D~~G~G~S~   65 (277)
T d1brta_          49 AGYRVITYDRRGFGQSS   65 (277)
T ss_dssp             TTCEEEEECCTTSTTSC
T ss_pred             CCCEEEEEeCCCCCccc
Confidence            89999999999987764

>d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Carbon-carbon bond hydrolase
domain: Meta-cleavage product hydrolase CumD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=88.01  E-value=0.048  Score=50.95  Aligned_cols=35  Identities=14%  Similarity=0.122  Sum_probs=25.2

Q ss_pred             hHHHhHccCCCcceEEEEEecCceeeeeccCCCch
Q psy7108         534 TIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPE  568 (703)
Q Consensus       534 ~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~  568 (703)
                      .+..+++.-+.+++.++|||+||..++....+.|+
T Consensus        82 ~~~~~~~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~  116 (271)
T d1uk8a_          82 HIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSE  116 (271)
T ss_dssp             HHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCGG
T ss_pred             hhhhhhhhhcCCCceEeeccccceeehHHHHhhhc
Confidence            34555555566799999999999887766655443

>d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Carbon-carbon bond hydrolase
domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD)
species: Burkholderia xenovorans [TaxId: 36873]

Probab=87.84  E-value=0.13  Score=48.31  Aligned_cols=47  Identities=11%  Similarity=0.205  Sum_probs=36.8

Q ss_pred             HHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccccCC
Q psy7108         620 ILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLGN  669 (703)
Q Consensus       620 i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~~~  669 (703)
                      +++..+.++++++|||+|+.+++.++..+|+   +++.+++++|......
T Consensus        94 li~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lil~~~~~~~~~  140 (283)
T d2rhwa1          94 LMDALDIDRAHLVGNAMGGATALNFALEYPD---RIGKLILMGPGGLGPS  140 (283)
T ss_dssp             HHHHHTCCCEEEEEETHHHHHHHHHHHHCGG---GEEEEEEESCSCCCCC
T ss_pred             ccccccccccccccccchHHHHHHHHHHhhh---hcceEEEeCCCcCCcc
Confidence            3444566789999999999999998888775   6788888888765443

>d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Atu1826-like
domain: XC6422 protein
species: Xanthomonas campestris [TaxId: 339]

Probab=87.75  E-value=0.15  Score=46.55  Aligned_cols=51  Identities=22%  Similarity=0.185  Sum_probs=41.0

Q ss_pred             cchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccc
Q psy7108         611 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF  666 (703)
Q Consensus       611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~  666 (703)
                      -|+-+.++++.+....++++.+|||+|+.+++.++..     ..++.+++++|...
T Consensus        93 ~D~~a~~~~~~~~~~~~~v~l~G~S~Gg~va~~~a~~-----~~~~~lil~ap~~~  143 (218)
T d2fuka1          93 DDLRAVAEWVRAQRPTDTLWLAGFSFGAYVSLRAAAA-----LEPQVLISIAPPAG  143 (218)
T ss_dssp             HHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHH-----HCCSEEEEESCCBT
T ss_pred             HHHHHHHHHHhhcccCceEEEEEEcccchhhhhhhcc-----cccceEEEeCCccc
Confidence            4788999999999888899999999999887765543     24567888888653

>d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Haloperoxidase
domain: Bromoperoxidase A2
species: Streptomyces aureofaciens [TaxId: 1894]

Probab=87.66  E-value=0.098  Score=48.72  Aligned_cols=42  Identities=17%  Similarity=0.164  Sum_probs=28.1

Q ss_pred             HhhCCCCceEEEEeChhHH-HHHHHhcCCchHHHHHHHheeccccc
Q psy7108         621 LNQTGHNSLITLGHSLGTT-NVLIAGSLRPEYQTKVRLNVLWAQSA  665 (703)
Q Consensus       621 ~~~t~~~~~~~vg~s~g~~-~~~~~~s~~~~~~~~i~~~~~l~p~~  665 (703)
                      +..-+.++++++|||+|+. ++..+....|+   +|+.++.++|+.
T Consensus        84 l~~l~~~~~~lvGhS~G~~~~~~~~a~~~p~---~v~~lvl~~~~~  126 (277)
T d1brta_          84 LETLDLQDAVLVGFSTGTGEVARYVSSYGTA---RIAKVAFLASLE  126 (277)
T ss_dssp             HHHHTCCSEEEEEEGGGHHHHHHHHHHHCST---TEEEEEEESCCC
T ss_pred             hhccCcccccccccccchhhhhHHHHHhhhc---ccceEEEecCCC
Confidence            3334667899999999974 45444544454   577778777654

>d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Thioesterases
domain: Palmitoyl protein thioesterase 1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=87.39  E-value=0.1  Score=49.43  Aligned_cols=37  Identities=11%  Similarity=0.002  Sum_probs=30.9

Q ss_pred             CCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecc
Q psy7108         624 TGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWA  662 (703)
Q Consensus       624 t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~  662 (703)
                      ++..+++.||||||+.++-.++...+..  +|..+|.|+
T Consensus        77 ~~~~~v~lVGhSqGGLiaR~~i~~~~~~--~V~~lITLg  113 (279)
T d1ei9a_          77 KLQQGYNAMGFSQGGQFLRAVAQRCPSP--PMVNLISVG  113 (279)
T ss_dssp             GGTTCEEEEEETTHHHHHHHHHHHCCSS--CEEEEEEES
T ss_pred             ccccceeEEEEccccHHHHHHHHHcCCC--CcceEEEEC
Confidence            4667899999999999999988876643  588888888

>d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Haloperoxidase
domain: Gamma-lactamase
species: Aureobacterium sp. [TaxId: 51671]

Probab=87.32  E-value=0.11  Score=48.52  Aligned_cols=41  Identities=17%  Similarity=0.180  Sum_probs=26.9

Q ss_pred             hhCCCCceEEEEeChhHH-HHHHHhcCCchHHHHHHHheeccccc
Q psy7108         622 NQTGHNSLITLGHSLGTT-NVLIAGSLRPEYQTKVRLNVLWAQSA  665 (703)
Q Consensus       622 ~~t~~~~~~~vg~s~g~~-~~~~~~s~~~~~~~~i~~~~~l~p~~  665 (703)
                      +.-+.++++.+|||+|+. ++..+...+|+   +|+.++++++..
T Consensus        85 ~~l~~~~~~lvGhS~Gg~~~a~~~a~~~p~---~v~~lvli~~~~  126 (279)
T d1hkha_          85 ETLDLRDVVLVGFSMGTGELARYVARYGHE---RVAKLAFLASLE  126 (279)
T ss_dssp             HHHTCCSEEEEEETHHHHHHHHHHHHHCST---TEEEEEEESCCC
T ss_pred             hhcCcCccccccccccccchhhhhcccccc---ccceeEEeeccC
Confidence            334556899999999964 45544444454   567777776543

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=87.12  E-value=2.6  Score=44.04  Aligned_cols=51  Identities=16%  Similarity=0.183  Sum_probs=37.5

Q ss_pred             CCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEE
Q psy7108         163 ADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLI  220 (703)
Q Consensus       163 pdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~  220 (703)
                      ..|..+++|+.|+.++.+|.++|+.+-++......       .-.-+.+..+|+.+++
T Consensus       495 tagglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~~~-------~~~P~ty~~~G~qYv~  545 (582)
T d1flga_         495 TAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGI-------VSPPITWEQDGEQYLG  545 (582)
T ss_dssp             ETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCC-------CSCCEEEEETTEEEEE
T ss_pred             EcCCeEEEeCCCCeEEEEECCCCcEeEEEECCCCc-------cccCEEEEECCEEEEE
Confidence            35678888999999999999999999988755431       1122567788875443

>d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: YdeN-like
domain: Hypothetical protein YdeN
species: Bacillus subtilis [TaxId: 1423]

Probab=87.01  E-value=0.073  Score=46.91  Aligned_cols=25  Identities=24%  Similarity=0.215  Sum_probs=19.1

Q ss_pred             CcceEEEEEecCceeeeeccCCCch
Q psy7108         544 HNSLITLGHSLGTTNVLIAGSLRPE  568 (703)
Q Consensus       544 ~~~~~~~g~S~G~~~~~~~~~~~~~  568 (703)
                      ..++.++|||+||+.++.++.+.+.
T Consensus        61 ~~~~~lvGhS~Gg~~a~~~a~~~~~   85 (186)
T d1uxoa_          61 HENTYLVAHSLGCPAILRFLEHLQL   85 (186)
T ss_dssp             CTTEEEEEETTHHHHHHHHHHTCCC
T ss_pred             CCCcEEEEechhhHHHHHHHHhCCc
Confidence            4678999999999877766665543

>d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Carboxylesterase/lipase
domain: Carboxylesterase Est
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=86.92  E-value=0.037  Score=50.08  Aligned_cols=25  Identities=32%  Similarity=0.377  Sum_probs=19.5

Q ss_pred             CCcceEEEEEecCceeeeeccCCCc
Q psy7108         543 GHNSLITLGHSLGTTNVLIAGSLRP  567 (703)
Q Consensus       543 ~~~~~~~~g~S~G~~~~~~~~~~~~  567 (703)
                      +.+++.++|||+||..++....+.|
T Consensus        79 ~~~~~~l~G~S~Gg~~~~~~~~~~~  103 (242)
T d1tqha_          79 GYEKIAVAGLSLGGVFSLKLGYTVP  103 (242)
T ss_dssp             TCCCEEEEEETHHHHHHHHHHTTSC
T ss_pred             ccCceEEEEcchHHHHhhhhcccCc
Confidence            4578999999999987766665554

>d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Epoxide hydrolase
domain: Bacterial epoxide hydrolase
species: Agrobacterium radiobacter [TaxId: 358]

Probab=86.92  E-value=0.15  Score=47.84  Aligned_cols=46  Identities=11%  Similarity=0.126  Sum_probs=35.8

Q ss_pred             HHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccc
Q psy7108         617 IDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  665 (703)
Q Consensus       617 i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~  665 (703)
                      +.-+++.-+..+++++|||+|+++++.++..+|+   ++..+++++|+.
T Consensus        88 ~~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~  133 (293)
T d1ehya_          88 QAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSD---RVIKAAIFDPIQ  133 (293)
T ss_dssp             HHHHHHHTTCCCEEEEEETHHHHHHHHHHHHTGG---GEEEEEEECCSC
T ss_pred             HHhhhhhcCccccccccccccccchhcccccCcc---ccceeeeeeccC
Confidence            4445566677889999999999999999988775   566777777653

>d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Carbon-carbon bond hydrolase
domain: Meta cleavage compound hydrolase CarC
species: Janthinobacterium sp. J3 [TaxId: 213804]

Probab=86.91  E-value=0.031  Score=52.29  Aligned_cols=37  Identities=24%  Similarity=0.289  Sum_probs=26.4

Q ss_pred             CcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108         544 HNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  583 (703)
Q Consensus       544 ~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~  583 (703)
                      ..+..++|||+||..++..+.+.|+   +++.++..+|+.
T Consensus        91 ~~~~~liG~S~Gg~ia~~~a~~~p~---~v~~lil~~~~~  127 (268)
T d1j1ia_          91 DGKVSIVGNSMGGATGLGVSVLHSE---LVNALVLMGSAG  127 (268)
T ss_dssp             SSCEEEEEEHHHHHHHHHHHHHCGG---GEEEEEEESCCB
T ss_pred             cccceeeeccccccccchhhccChH---hhheeeecCCCc
Confidence            4578999999999988776665544   566666666543

>d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Haloalkane dehalogenase
domain: Haloalkane dehalogenase
species: Rhodococcus sp. [TaxId: 1831]

Probab=86.82  E-value=0.057  Score=50.95  Aligned_cols=33  Identities=18%  Similarity=0.271  Sum_probs=23.1

Q ss_pred             HHhHccCCCcceEEEEEecCceeeeeccCCCch
Q psy7108         536 DYILNQTGHNSLITLGHSLGTTNVLIAGSLRPE  568 (703)
Q Consensus       536 ~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~  568 (703)
                      .-+++.-+..++.++|||+||..++....+.|+
T Consensus        86 ~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~  118 (291)
T d1bn7a_          86 DAFIEALGLEEVVLVIHDWGSALGFHWAKRNPE  118 (291)
T ss_dssp             HHHHHHTTCCSEEEEEEHHHHHHHHHHHHHCGG
T ss_pred             hhhhhhhccccccccccccccchhHHHHHhCCc
Confidence            334444456789999999999877665555544

>d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Hypothetical protein VC1974
domain: Hypothetical protein VC1974
species: Vibrio cholerae [TaxId: 666]

Probab=86.78  E-value=0.41  Score=43.18  Aligned_cols=29  Identities=21%  Similarity=0.140  Sum_probs=23.6

Q ss_pred             hCCCCceEEEEeChhHHHHHHHhcCCchH
Q psy7108         623 QTGHNSLITLGHSLGTTNVLIAGSLRPEY  651 (703)
Q Consensus       623 ~t~~~~~~~vg~s~g~~~~~~~~s~~~~~  651 (703)
                      ..+..+++.+|||+|+.++..++...|+.
T Consensus        80 ~~~~~~~~lvGhS~Gg~ia~~~a~~~~~~  108 (264)
T d1r3da_          80 VTSEVPVILVGYSLGGRLIMHGLAQGAFS  108 (264)
T ss_dssp             CCTTSEEEEEEETHHHHHHHHHHHHTTTT
T ss_pred             ccccCceeeeeecchHHHHHHHHHhCchh
Confidence            34567899999999999998888876653

>d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Hypothetical protein TT1662
domain: Hypothetical protein TT1662
species: Thermus thermophilus [TaxId: 274]

Probab=86.35  E-value=0.022  Score=52.69  Aligned_cols=25  Identities=20%  Similarity=0.029  Sum_probs=20.2

Q ss_pred             CcceEEEEEecCceeeeeccCCCch
Q psy7108         544 HNSLITLGHSLGTTNVLIAGSLRPE  568 (703)
Q Consensus       544 ~~~~~~~g~S~G~~~~~~~~~~~~~  568 (703)
                      ..+++++|||+||+.++.+.+..|.
T Consensus       104 ~~~v~~~G~S~Gg~~a~~~~~~~p~  128 (238)
T d1ufoa_         104 GLPLFLAGGSLGAFVAHLLLAEGFR  128 (238)
T ss_dssp             CCCEEEEEETHHHHHHHHHHHTTCC
T ss_pred             CceEEEEEecccHHHHHHHHhcCcc
Confidence            4689999999999988777666554

>d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Carbon-carbon bond hydrolase
domain: Meta-cleavage product hydrolase CumD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=86.31  E-value=0.2  Score=46.28  Aligned_cols=51  Identities=16%  Similarity=0.109  Sum_probs=39.7

Q ss_pred             hHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccc
Q psy7108         613 TTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF  666 (703)
Q Consensus       613 ~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~  666 (703)
                      .-+.+..+++..+.++++++|||+|+.+++.++..+|.   +++.+++++|...
T Consensus        79 ~~~~~~~~~~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~---~~~~lil~~~~~~  129 (271)
T d1uk8a_          79 WVDHIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSE---RVDRMVLMGAAGT  129 (271)
T ss_dssp             HHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCGG---GEEEEEEESCCCS
T ss_pred             cchhhhhhhhhhcCCCceEeeccccceeehHHHHhhhc---cchheeecccCCC
Confidence            34567777778888899999999999999999888665   4666677776543

>d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Acetyl xylan esterase-like
domain: Acetyl xylan esterase TM0077
species: Thermotoga maritima [TaxId: 2336]

Probab=86.05  E-value=0.097  Score=50.59  Aligned_cols=40  Identities=13%  Similarity=0.149  Sum_probs=30.9

Q ss_pred             hcccCCchhhHHHhHccCC--CcceEEEEEecCceeeeeccC
Q psy7108         525 ELGLYDTTATIDYILNQTG--HNSLITLGHSLGTTNVLIAGS  564 (703)
Q Consensus       525 ~~g~~d~~~~~~~i~~~~~--~~~~~~~g~S~G~~~~~~~~~  564 (703)
                      .....|..++++|+...+.  ..+++++|+|+||+.++++..
T Consensus       157 ~~~~~d~~~a~~~~~~~~~~d~~ri~~~G~S~GG~~a~~~~~  198 (322)
T d1vlqa_         157 RRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSA  198 (322)
T ss_dssp             HHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCcCchhccccccccchHHHHHHHh
Confidence            3445678889999998765  368999999999987766544

>d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Putative serine hydrolase Ydr428c
domain: Putative serine hydrolase Ydr428c
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.01  E-value=0.062  Score=50.34  Aligned_cols=39  Identities=26%  Similarity=0.456  Sum_probs=31.5

Q ss_pred             cccCCchhhHHHhHccCCCcceEEEEEecCceeeeeccC
Q psy7108         526 LGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGS  564 (703)
Q Consensus       526 ~g~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~  564 (703)
                      .++.|..+++.|+.+.....++.++|||+||.+++..+.
T Consensus        85 ~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~lal~~a~  123 (263)
T d1vkha_          85 RNLYDAVSNITRLVKEKGLTNINMVGHSVGATFIWQILA  123 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHT
T ss_pred             HHHHhhhhhhhcccccccccceeeeccCcHHHHHHHHHH
Confidence            345688889999998877789999999999987765443

>d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Thioesterases
domain: Palmitoyl protein thioesterase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.95  E-value=0.053  Score=50.07  Aligned_cols=42  Identities=12%  Similarity=-0.035  Sum_probs=26.8

Q ss_pred             HHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhh
Q psy7108         536 DYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWA  580 (703)
Q Consensus       536 ~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~  580 (703)
                      .-+++.-+ +++.++|||+||..++..+.+.|+.  +++.++..+
T Consensus        61 ~~~l~~l~-~~~~lvGhS~GG~ia~~~a~~~p~~--~v~~lvl~~  102 (268)
T d1pjaa_          61 VPIMAKAP-QGVHLICYSQGGLVCRALLSVMDDH--NVDSFISLS  102 (268)
T ss_dssp             HHHHHHCT-TCEEEEEETHHHHHHHHHHHHCTTC--CEEEEEEES
T ss_pred             HHHHhccC-CeEEEEccccHHHHHHHHHHHCCcc--ccceEEEEC
Confidence            33444444 7999999999998877766655431  344444443

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=85.68  E-value=8.9  Score=39.46  Aligned_cols=206  Identities=14%  Similarity=0.120  Sum_probs=112.9

Q ss_pred             CEEEEEeCCCcEEEEEcCCCceeEEEecCC----------CcE-EEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEe
Q psy7108          62 TGMVSASWDKTVKLWNAVETDTQHETIQLL----------SDA-LCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVE  130 (703)
Q Consensus        62 ~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~----------~~V-~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~  130 (703)
                      ..|+.++.++.|.-.|.++++.+.+.....          ..+ ..++..  +..++.++.|+.|.-.|..+|+.+....
T Consensus        67 g~vyv~t~~~~v~AlDa~tG~~lW~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~g~l~Alda~tG~~~w~~~  144 (560)
T d1kv9a2          67 GVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALW--GDKVYVGTLDGRLIALDAKTGKAIWSQQ  144 (560)
T ss_dssp             TEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE--BTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred             CEEEEECCCCeEEEEeCCCCCEEEEECCCCCccccccccccccccCccee--CCeEEEEeCCCEEEEEECCCCcEEeccC
Confidence            456667778888888999987766542110          011 112222  4568888899999999999999987765


Q ss_pred             ccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe------cCCcEEEEECCCCceEEEEEeccCCcccc---
Q psy7108         131 ARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG------QSKYICIYSSREGILLKKFTITQNKSLDG---  201 (703)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s------~dg~I~lwD~~~~~~~~~~~~~~~~~~~~---  201 (703)
                      ........                .++..-.--++ .++.+.      ..|.|.-+|.++|+.+-++..-.......   
T Consensus       145 ~~~~~~~~----------------~~~~~p~v~~~-~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t~~~~~~~~~~~  207 (560)
T d1kv9a2         145 TTDPAKPY----------------SITGAPRVVKG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEH  207 (560)
T ss_dssp             CSCTTSSC----------------BCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSS
T ss_pred             ccCcccce----------------eeeeeeeeecC-cccccccceeccccceEEEEECCCceEEeeeeeccccccCCccc
Confidence            43210000                00000000122 333332      23679999999999988876432110000   


Q ss_pred             -------------------ccc-cceeeeeccCCCEEEEEcccCCC---------CC----eeEEECCCCCCCccceeec
Q psy7108         202 -------------------IND-FINRRKMTEFGNVSLIETRETHE---------GG----NVVLKLPGVKKGDMAARVL  248 (703)
Q Consensus       202 -------------------~~~-~v~~~~~spdg~~l~~~~~~~~~---------~~----~~~i~iwd~~~~~~~~~~~  248 (703)
                                         ... .-...++.+....+++.......         .+    ...|.-.|.++++..-.+.
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~G~~~W~~~s~D~~~~l~y~~tgn~~~~~~~~~~~~~g~n~~s~sivAld~~tG~~~W~~Q  287 (560)
T d1kv9a2         208 PELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQ  287 (560)
T ss_dssp             HHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEE
T ss_pred             cccccccccccccccccccCCCCcccccccccccCeeeecCCCCcccccccccccCCccccceeeEEecCCccceeEEEe
Confidence                               000 11235666777776665543110         00    1245555888887654443


Q ss_pred             CCccce---------EEEEEcCCCC---EEEEEeCCC-EEEEEcCCCceec
Q psy7108         249 KPEVRV---------FCVKFSPTGQ---AWVAATTEG-VHIYSLDSGYVFD  286 (703)
Q Consensus       249 ~h~~~V---------~~l~~spdg~---~l~s~s~Dg-v~iwd~~~~~~~~  286 (703)
                      .....+         .-+....+|+   .++.++.+| +.++|..+|+.+.
T Consensus       288 ~~~~D~wd~d~~~~~~l~~~~~~g~~~~~v~~~~k~G~~~~lDr~tG~~i~  338 (560)
T d1kv9a2         288 VTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLIS  338 (560)
T ss_dssp             SSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEE
T ss_pred             ccccccccccccceeeeeeeecCCceeeeeeecCccceEEEEecCCCcccc
Confidence            211111         1122223443   456777888 9999999998754

>d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: 2,6-dihydropseudooxynicotine hydrolase-like
domain: 2,6-dihydropseudooxynicotine hydrolase
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=85.31  E-value=0.056  Score=53.88  Aligned_cols=51  Identities=24%  Similarity=0.409  Sum_probs=38.8

Q ss_pred             hHHHHHHHHhhCC--CCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccccc
Q psy7108         613 TTATIDYILNQTG--HNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFL  667 (703)
Q Consensus       613 ~pa~i~~i~~~t~--~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~  667 (703)
                      .-+.+||+.....  ..+|.++|||+|+..+..+++..|.    |+.+|+++|+..+
T Consensus       186 ~~~v~d~l~~~~~vd~~rI~l~G~S~GG~~Al~~A~~~pr----i~a~V~~~~~~~~  238 (360)
T d2jbwa1         186 TSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEPR----LAACISWGGFSDL  238 (360)
T ss_dssp             HHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCTT----CCEEEEESCCSCS
T ss_pred             HHHHHHHHHhcccccccceeehhhhcccHHHHHHhhcCCC----cceEEEEcccccH
Confidence            4467888876653  4679999999999998888876664    6777888887654

>d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Hydroxynitrile lyase-like
domain: Salicylic acid-binding protein 2 (SABP2)
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=85.19  E-value=0.1  Score=47.43  Aligned_cols=33  Identities=27%  Similarity=0.441  Sum_probs=22.9

Q ss_pred             HHhHccCCCcceEEEEEecCceeeeeccCCCch
Q psy7108         536 DYILNQTGHNSLITLGHSLGTTNVLIAGSLRPE  568 (703)
Q Consensus       536 ~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~  568 (703)
                      ..+..........++|||+||..++.+..+.|+
T Consensus        62 ~~~~~~~~~~~~~lvghS~Gg~va~~~a~~~p~   94 (258)
T d1xkla_          62 ELMESLSADEKVILVGHSLGGMNLGLAMEKYPQ   94 (258)
T ss_dssp             HHHHTSCSSSCEEEEEETTHHHHHHHHHHHCGG
T ss_pred             hhhhcccccccccccccchhHHHHHHHhhhhcc
Confidence            344444455788999999999877766555544

>d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Haloalkane dehalogenase
domain: Haloalkane dehalogenase
species: Rhodococcus sp. [TaxId: 1831]

Probab=85.19  E-value=0.18  Score=47.14  Aligned_cols=49  Identities=14%  Similarity=0.121  Sum_probs=36.9

Q ss_pred             HHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccc
Q psy7108         615 ATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF  666 (703)
Q Consensus       615 a~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~  666 (703)
                      ..+..+++..+..+++++|||+|+.+++.++..+|+   .++.++++++...
T Consensus        83 ~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~---~~~~li~~~~~~~  131 (291)
T d1bn7a_          83 RYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPE---RVKGIACMEFIRP  131 (291)
T ss_dssp             HHHHHHHHHTTCCSEEEEEEHHHHHHHHHHHHHCGG---GEEEEEEEEECCC
T ss_pred             HHHhhhhhhhccccccccccccccchhHHHHHhCCc---ceeeeeeeccccC
Confidence            345555666777889999999999999999888776   4666666665543

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=85.18  E-value=4.7  Score=42.09  Aligned_cols=50  Identities=22%  Similarity=0.212  Sum_probs=36.7

Q ss_pred             CCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEE
Q psy7108         164 DGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLI  220 (703)
Q Consensus       164 dg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~  220 (703)
                      .|..++.|+.||.++.+|.++|+.+-++......       .-.-+.+..+|+.+++
T Consensus       483 agglVF~G~~Dg~l~A~Da~TGe~LW~~~~~~~~-------~a~P~tY~~dGkQYva  532 (596)
T d1w6sa_         483 AGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGA-------IGYPMTYTHKGTQYVA  532 (596)
T ss_dssp             TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCC-------CSCCEEEEETTEEEEE
T ss_pred             cCCEEEEECCCCeEEEEECCCCcEeeEEECCCCc-------ccCCeEEEECCEEEEE
Confidence            4677888999999999999999999888755431       1122556678875443

>d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Carbon-carbon bond hydrolase
domain: Meta cleavage compound hydrolase CarC
species: Janthinobacterium sp. J3 [TaxId: 213804]

Probab=85.06  E-value=0.2  Score=46.17  Aligned_cols=40  Identities=23%  Similarity=0.272  Sum_probs=32.9

Q ss_pred             CCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccccC
Q psy7108         626 HNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLG  668 (703)
Q Consensus       626 ~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~~  668 (703)
                      ..+++++|||+|+.+++.++..+|+   +|+.+++++|.....
T Consensus        91 ~~~~~liG~S~Gg~ia~~~a~~~p~---~v~~lil~~~~~~~~  130 (268)
T d1j1ia_          91 DGKVSIVGNSMGGATGLGVSVLHSE---LVNALVLMGSAGLVV  130 (268)
T ss_dssp             SSCEEEEEEHHHHHHHHHHHHHCGG---GEEEEEEESCCBCCC
T ss_pred             cccceeeeccccccccchhhccChH---hhheeeecCCCcccc
Confidence            3568999999999999999888776   678888898876543

>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=84.79  E-value=20  Score=35.39  Aligned_cols=64  Identities=11%  Similarity=0.188  Sum_probs=41.5

Q ss_pred             cCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC
Q psy7108          89 QLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD  164 (703)
Q Consensus        89 ~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd  164 (703)
                      ..-...++++|.|||+.+++--.+|.|++++..+++...........            ......+....++++|+
T Consensus        24 ~~L~~P~~la~~pdg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~------------~~~~ge~GLLgia~~Pd   87 (450)
T d1crua_          24 SNLNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIV------------NDADGQNGLLGFAFHPD   87 (450)
T ss_dssp             CCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCC------------CCTTSSCSEEEEEECTT
T ss_pred             CCCCCceEEEEeCCCeEEEEEecCCEEEEEECCCCcEeecccCCccc------------cccCCCCceeeEEeCCC
Confidence            33456789999999998877645799999998877654333221110            00111346889999985

>d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Haloperoxidase
domain: Bromoperoxidase A1
species: Streptomyces aureofaciens [TaxId: 1894]

Probab=84.77  E-value=0.11  Score=48.42  Aligned_cols=17  Identities=29%  Similarity=0.311  Sum_probs=15.0

Q ss_pred             ccccceeecccCccccc
Q psy7108         425 RGYDIWLWNARGNVYSR  441 (703)
Q Consensus       425 ~~~~~~~~~~~~~~~~~  441 (703)
                      +||.|+..|.||...|.
T Consensus        45 ~g~~vi~~D~~G~G~S~   61 (274)
T d1a8qa_          45 AGYRGIAHDRRGHGHST   61 (274)
T ss_dssp             TTCEEEEECCTTSTTSC
T ss_pred             CCCEEEEEeCCCCcccc
Confidence            89999999999987664

>d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Hydroxynitrile lyase-like
domain: Hydroxynitrile lyase
species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]

Probab=84.36  E-value=0.45  Score=42.87  Aligned_cols=47  Identities=21%  Similarity=0.265  Sum_probs=34.4

Q ss_pred             HHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccc
Q psy7108         616 TIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA  665 (703)
Q Consensus       616 ~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~  665 (703)
                      ..+++...-..++++++|||+|+.++..++..+|.   +++.++.+++..
T Consensus        60 l~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~  106 (256)
T d3c70a1          60 LLTFLEALPPGEKVILVGESCGGLNIAIAADKYCE---KIAAAVFHNSVL  106 (256)
T ss_dssp             HHHHHHHSCTTCCEEEEEETTHHHHHHHHHHHHGG---GEEEEEEESCCC
T ss_pred             hhhhhhhhccccceeecccchHHHHHHHHhhcCch---hhhhhheecccc
Confidence            33444444456789999999999999888877554   677788887654

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=84.35  E-value=8.7  Score=39.65  Aligned_cols=76  Identities=13%  Similarity=0.016  Sum_probs=44.4

Q ss_pred             CcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccce
Q psy7108         175 KYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRV  254 (703)
Q Consensus       175 g~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V  254 (703)
                      |.+.-||+.+++.+-+......         ...-..+-.|..+++++.++      .++.+|.++|+.+-.+.-.....
T Consensus       457 G~l~AiD~~tGk~~W~~~~~~p---------~~gg~lstagglVF~G~~dg------~l~A~Da~TGe~LW~~~~~~~~~  521 (573)
T d1kb0a2         457 GRLLAWDPVAQKAAWSVEHVSP---------WNGGTLTTAGNVVFQGTADG------RLVAYHAATGEKLWEAPTGTGVV  521 (573)
T ss_dssp             EEEEEEETTTTEEEEEEEESSS---------CCCCEEEETTTEEEEECTTS------EEEEEETTTCCEEEEEECSSCCC
T ss_pred             ccEEEeCCCCCceEeeecCCCC---------CCCceEEEcCCEEEEECCCC------eEEEEECCCCcEeEEEECCCCcc
Confidence            3577788888877766543221         11223444666777665543      79999999999886665322111


Q ss_pred             -EEEEEcCCCCE
Q psy7108         255 -FCVKFSPTGQA  265 (703)
Q Consensus       255 -~~l~~spdg~~  265 (703)
                       .-+.|..||+.
T Consensus       522 ~~P~ty~~~GkQ  533 (573)
T d1kb0a2         522 AAPSTYMVDGRQ  533 (573)
T ss_dssp             SCCEEEEETTEE
T ss_pred             ccCEEEEECCEE
Confidence             11445557763

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=84.34  E-value=16  Score=33.91  Aligned_cols=97  Identities=12%  Similarity=0.143  Sum_probs=62.8

Q ss_pred             CcEEEEEcCCCceeE-EEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhc
Q psy7108          71 KTVKLWNAVETDTQH-ETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQ  149 (703)
Q Consensus        71 g~V~iWd~~~~~~~~-~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (703)
                      ..|.|-|+.+...+. ....    .-+.-.+|..+.||.-+ ..++.++|+++.+.++.+.-..                
T Consensus        45 ~~VvIidl~n~~~~~Rrpi~----AdsAIMhP~~~IiALra-g~~LQiFnletK~klks~~~~e----------------  103 (327)
T d1utca2          45 AQVVIIDMNDPSNPIRRPIS----ADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD----------------  103 (327)
T ss_dssp             EEEEEEETTSTTSCEEEECC----CSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSS----------------
T ss_pred             ceEEEEECCCCCcceecccc----hhhhhcCCCCcEEEEec-CCeEEEEehhHhhhhceEEcCC----------------
Confidence            468888987665432 2222    23455678888888776 5689999999999998887655                


Q ss_pred             ccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCC-CceEEEEEecc
Q psy7108         150 SLKAKAVSTVCYSADGSCILAAGQSKYICIYSSRE-GILLKKFTITQ  195 (703)
Q Consensus       150 ~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~-~~~~~~~~~~~  195 (703)
                           .|.--.|-.+. .|+..+ +..|+-|+++. ..+.+.|..+.
T Consensus       104 -----~VvfWkWis~~-~L~lVT-~taVYHW~~~g~s~P~k~fdR~~  143 (327)
T d1utca2         104 -----DVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRHS  143 (327)
T ss_dssp             -----CCCEEEESSSS-EEEEEC-SSEEEEEESSSSCCCEEEEECCG
T ss_pred             -----CcEEEEecCCC-EEEEEc-CCceEEEcccCCCCchhhhhhcc
Confidence                 35455665444 343333 35688888853 34566665444

>d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492 {Silicibacter sp. tm1040 [TaxId: 292414]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Carboxylesterase
domain: Uncharacterized protein TM1040 2492
species: Silicibacter sp. tm1040 [TaxId: 292414]

Probab=84.03  E-value=0.13  Score=48.40  Aligned_cols=37  Identities=14%  Similarity=0.102  Sum_probs=29.1

Q ss_pred             ccCCchhhHHHhHccCCCcceEEEEEecCceeeeeccC
Q psy7108         527 GLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGS  564 (703)
Q Consensus       527 g~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~  564 (703)
                      .+.|+.+++.|+...- .++++++|||.||+++.+.+.
T Consensus       111 ~~~d~~~a~~~~~~~~-~~rI~l~G~SaGG~la~~~~~  147 (261)
T d2pbla1         111 ITQQISQAVTAAAKEI-DGPIVLAGHSAGGHLVARMLD  147 (261)
T ss_dssp             HHHHHHHHHHHHHHHS-CSCEEEEEETHHHHHHHHTTC
T ss_pred             hHHHHHHHHHHHHhcc-cCceEEEEcchHHHHHHHHhc
Confidence            3567888999999764 478999999999987655444

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=83.97  E-value=10  Score=39.35  Aligned_cols=209  Identities=12%  Similarity=0.068  Sum_probs=111.7

Q ss_pred             CCCEEEEEeCCCcEEEEEc-CCCceeEEEecC----------CCcE-EEEEEecC----CCEEEEEECCCeEEEEEcCCC
Q psy7108          60 SSTGMVSASWDKTVKLWNA-VETDTQHETIQL----------LSDA-LCVAYKPD----GTEIVVATLDGQLIMFDVESA  123 (703)
Q Consensus        60 dg~~L~sgs~Dg~V~iWd~-~~~~~~~~~~~~----------~~~V-~~v~~spd----g~~las~s~dg~I~vwd~~~~  123 (703)
                      ++.++++++.++.+...|. ++++.+.+....          ...+ +.+++.++    +..++.++.|+.|.-.|.++|
T Consensus        62 ~g~ly~~t~~~~~v~a~d~~~tG~~~W~~~~~~~~~~~~~~~~~~~~RGv~~~~~~~~~~~~v~~~t~dg~l~Alda~tG  141 (596)
T d1w6sa_          62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG  141 (596)
T ss_dssp             TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred             CCEEEEeeCCCCcEEEEeCCCCCCEEEEecCCCCcccccccccccccceeEEecCCCCCceEEEEEeCCCCeEeeccccC
Confidence            3444444455566666665 456554443210          0011 33555443    246888899999999999999


Q ss_pred             cEEEEEeccccCCCCCCCCccchhhcccCCccEEE-EEEcCCCCEEEEEec------CCcEEEEECCCCceEEEEEeccC
Q psy7108         124 AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVST-VCYSADGSCILAAGQ------SKYICIYSSREGILLKKFTITQN  196 (703)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~-i~~spdg~~l~s~s~------dg~I~lwD~~~~~~~~~~~~~~~  196 (703)
                      +.+..+.......                ...++. ..+.  +..+++++.      .|.|+-+|+++|+.+-++.....
T Consensus       142 ~~~w~~~~~d~~~----------------~~~~t~~P~v~--~~~vivg~~~~e~~~~G~v~A~Da~TG~~~W~~~t~~~  203 (596)
T d1w6sa_         142 ETVWKVENSDIKV----------------GSTLTIAPYVV--KDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGP  203 (596)
T ss_dssp             CEEEEEECCCGGG----------------TCBCCSCCEEE--TTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSC
T ss_pred             ceecccccccccc----------------ccccccCCcEE--CCeEEEeeccccccccCceEEEECCCCcEEEEeeccCC
Confidence            9987775321100                000110 0011  234555432      48899999999999887753221


Q ss_pred             C------------------------cc------ccccccceeeeeccCCCEEEEEcccCCCC----------CeeEEECC
Q psy7108         197 K------------------------SL------DGINDFINRRKMTEFGNVSLIETRETHEG----------GNVVLKLP  236 (703)
Q Consensus       197 ~------------------------~~------~~~~~~v~~~~~spdg~~l~~~~~~~~~~----------~~~~i~iw  236 (703)
                      .                        ..      .+-...-...++.+....+++........          -...+.-.
T Consensus       204 ~~~~~~~~~~~~~~~~~g~~~~~~~tw~g~~~~~gg~~~W~~~s~D~~~~lvy~~tg~~~p~~~~~r~g~n~ys~sivAl  283 (596)
T d1w6sa_         204 DKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGR  283 (596)
T ss_dssp             HHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEE
T ss_pred             ccccccccccccccccccccccccccCCCCceecCCCccccccccccCCCeeeccccccccccccccccccccccccccc
Confidence            0                        00      00001123345666666666665432100          01245556


Q ss_pred             CCCCCccceeecC--Ccc-------ceEEEE-EcCCCC---EEEEEeCCC-EEEEEcCCCceec
Q psy7108         237 GVKKGDMAARVLK--PEV-------RVFCVK-FSPTGQ---AWVAATTEG-VHIYSLDSGYVFD  286 (703)
Q Consensus       237 d~~~~~~~~~~~~--h~~-------~V~~l~-~spdg~---~l~s~s~Dg-v~iwd~~~~~~~~  286 (703)
                      |.++|+..-.+..  |+.       ...-+. -..+|+   .++.+..+| +.++|..+|+.+.
T Consensus       284 D~~TG~~~W~~Q~~~~D~Wd~d~~~~~~l~d~~~~~G~~~~~v~~~~k~G~~~vlDr~tG~~i~  347 (596)
T d1w6sa_         284 DADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVS  347 (596)
T ss_dssp             ETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEE
T ss_pred             ccccccccccccceeccccCCccccceeeeeccccccccccceeccccccceeeecCCCCceee
Confidence            7888876654432  221       111122 123443   467788888 9999999998764

>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=83.35  E-value=7.5  Score=38.80  Aligned_cols=60  Identities=8%  Similarity=0.003  Sum_probs=40.3

Q ss_pred             cEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccC
Q psy7108         155 AVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEF  214 (703)
Q Consensus       155 ~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spd  214 (703)
                      .-++++|.|||+.+++--.+|.|++++..+++...............-+.-...++++|+
T Consensus        28 ~P~~la~~pdg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pd   87 (450)
T d1crua_          28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD   87 (450)
T ss_dssp             SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred             CceEEEEeCCCeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCC
Confidence            568999999999887765579999999888766544433222111112235677899885

>d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Carboxylesterase/thioesterase 1
domain: Uncharacterized protein Mll8374
species: Mesorhizobium loti [TaxId: 381]

Probab=83.29  E-value=0.27  Score=44.18  Aligned_cols=51  Identities=24%  Similarity=0.144  Sum_probs=37.2

Q ss_pred             hHHHHHHHHhhC--CCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccc
Q psy7108         613 TTATIDYILNQT--GHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF  666 (703)
Q Consensus       613 ~pa~i~~i~~~t--~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~  666 (703)
                      +.++|+.+.+..  ..++++.+|||||+.+.+.++..+|.   .+..+++++|...
T Consensus        88 l~~~l~~~~~~~~id~~ri~l~G~S~Gg~~a~~~a~~~p~---~~~~~v~~~g~~~  140 (209)
T d3b5ea1          88 FAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPG---IVRLAALLRPMPV  140 (209)
T ss_dssp             HHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTT---SCSEEEEESCCCC
T ss_pred             HHHHHHHHHHHhCcccCCEEEEeeCChHHHHHHHHHhCCC---cceEEEEeCCccc
Confidence            444566665543  35789999999999999988888775   3566777787653

>d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Biotin biosynthesis protein BioH
domain: Biotin biosynthesis protein BioH
species: Escherichia coli [TaxId: 562]

Probab=82.71  E-value=0.19  Score=46.29  Aligned_cols=26  Identities=31%  Similarity=0.270  Sum_probs=19.6

Q ss_pred             CcceEEEEEecCceeeeeccCCCchh
Q psy7108         544 HNSLITLGHSLGTTNVLIAGSLRPEY  569 (703)
Q Consensus       544 ~~~~~~~g~S~G~~~~~~~~~~~~~~  569 (703)
                      ..+..++|||+||..++....+.|+.
T Consensus        71 ~~~~~l~GhS~Gg~ia~~~a~~~p~~   96 (256)
T d1m33a_          71 PDKAIWLGWSLGGLVASQIALTHPER   96 (256)
T ss_dssp             CSSEEEEEETHHHHHHHHHHHHCGGG
T ss_pred             ccceeeeecccchHHHHHHHHhCCcc
Confidence            46788999999998777666555543

>d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Haloalkane dehalogenase
domain: Haloalkane dehalogenase
species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]

Probab=82.11  E-value=0.16  Score=47.30  Aligned_cols=32  Identities=9%  Similarity=-0.039  Sum_probs=22.4

Q ss_pred             HhHccCCCcceEEEEEecCceeeeeccCCCch
Q psy7108         537 YILNQTGHNSLITLGHSLGTTNVLIAGSLRPE  568 (703)
Q Consensus       537 ~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~  568 (703)
                      .+....+.+++.++|||+||..++....+.|+
T Consensus        91 ~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~  122 (298)
T d1mj5a_          91 LWEALDLGDRVVLVVHDWGSALGFDWARRHRE  122 (298)
T ss_dssp             HHHHTTCTTCEEEEEEHHHHHHHHHHHHHTGG
T ss_pred             ccccccccccCeEEEecccchhHHHHHHHHHh
Confidence            34455556789999999999876665554443

>d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases
domain: Surfactin synthetase, SrfA
species: Bacillus subtilis [TaxId: 1423]

Probab=80.82  E-value=0.22  Score=45.00  Aligned_cols=37  Identities=19%  Similarity=0.108  Sum_probs=29.1

Q ss_pred             HHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchH
Q psy7108         615 ATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEY  651 (703)
Q Consensus       615 a~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~  651 (703)
                      ..++.|....+...++++|||+|+.+++.++...|+.
T Consensus        59 ~~~~~i~~~~~~~~~~lvGhS~GG~vA~~~A~~~~~~   95 (230)
T d1jmkc_          59 RYADLIQKLQPEGPLTLFGYSAGCSLAFEAAKKLEGQ   95 (230)
T ss_dssp             HHHHHHHHHCCSSCEEEEEETHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHhCCCCcEEEEeeccChHHHHHHHHhhhhh
Confidence            4567777776777799999999999999887765543

>d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Haloalkane dehalogenase
domain: Haloalkane dehalogenase
species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]

Probab=80.70  E-value=0.37  Score=44.64  Aligned_cols=50  Identities=10%  Similarity=-0.080  Sum_probs=37.4

Q ss_pred             HHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccccc
Q psy7108         615 ATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFL  667 (703)
Q Consensus       615 a~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~  667 (703)
                      ..+..+....+..+++.||||+|+.+++.++..+|+   +++.++.+.|....
T Consensus        87 ~~~~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~---~v~~l~~~~~~~~~  136 (298)
T d1mj5a_          87 YLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRE---RVQGIAYMEAIAMP  136 (298)
T ss_dssp             HHHHHHHHTTCTTCEEEEEEHHHHHHHHHHHHHTGG---GEEEEEEEEECCSC
T ss_pred             hhccccccccccccCeEEEecccchhHHHHHHHHHh---hhheeecccccccc
Confidence            344555666677889999999999999999998776   45666666655543

>d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Proline iminopeptidase-like
domain: Proline aminopeptidase
species: Serratia marcescens [TaxId: 615]

Probab=80.19  E-value=0.18  Score=47.25  Aligned_cols=32  Identities=22%  Similarity=0.364  Sum_probs=21.8

Q ss_pred             HHhHccCCCcceEEEEEecCceeeeeccCCCc
Q psy7108         536 DYILNQTGHNSLITLGHSLGTTNVLIAGSLRP  567 (703)
Q Consensus       536 ~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~  567 (703)
                      ..++..-+..+..++|||+||..++......+
T Consensus        93 ~~~~~~~~~~~~~~vg~s~g~~~~~~~a~~~~  124 (313)
T d1wm1a_          93 ERLREMAGVEQWLVFGGSWGSTLALAYAQTHP  124 (313)
T ss_dssp             HHHHHHTTCSSEEEEEETHHHHHHHHHHHHCG
T ss_pred             HhhhhccCCCcceeEeeecCCchhhHHHHHHh
Confidence            33444456688999999999977665444333