Psyllid ID: psy7109

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230------
Protein Sequence
MDSFGNSKNLSDTHIQAKSPYLDFDPAYLPKTSQPEFIFPEGASKQRGRFELAFSQIGGSCMLGAAIGGAEGFYKGLRNTTLEGQTGKLRRTQLLNHIMKHGSATASTLGTIAVMYSSFGVLLQTTRGTDDDFNTLTAATATGMLFRSTGNCLVSSLSSFSLHFCDNKTSAVTVPSIRPLTCSQKLLENIVKERSKRCGLKKCGLGGVVGLGIASLYVLWNKRDSLSDFGSQYNPA
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccEEEEEEccccHHHHHccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccHHHccccccccEEcccccHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHcccccccc
Coil and Loop (DISEMBL)
mdsfgnsknlsdthiqakspyldfdpaylpktsqpefifpegaskqrGRFELAFSQIGGSCMLGAAIGGAEGFYKGLrnttlegqtgkLRRTQLLNHIMKHGSATASTLGTIAVMYSSFGVLlqttrgtdddfnTLTAATATGMLFRSTGNClvsslssfslhfcdnktsavtvpsirpltcSQKLLENIVKERskrcglkkcglggvvGLGIASLYVLWNkrdslsdfgsqynpa
Flexible Loop (DISEMBL)
mdsfgnsknlsdthiQAKSPYLDFDPAYLPKTSQPEFIFPEGASKQRGRFELAFSQIGGSCMLGAAIGGAEGFYKGLRNTTLEGQTGKLRRTQLLNHIMKHGSATASTLGTIAVMYSSFGVLLQTTRGTDDDFNTLTAATATGMLFRSTGNCLVSSLSSFSLHFCDNKTSavtvpsirpltcSQKLLENIVKerskrcglkkcglggvVGLGIASLYVLWNKRdslsdfgsqynpa
Low Complexity Region (SEG)
MDSFGNSKNLSDTHIQAKSPYLDFDPAYLPKTSQPEFIFPEGASKQRGRFELAFSQIGGSCMLGAAIGGAEGFYKGLRNTTLEGQTGKLRRTQLLNHIMKHGSATASTLGTIAVMYSSFGVLLQTTRGTDDDFNTLTAATATGMLFRSTGNClvsslssfslHFCDNKTSAVTVPSIRPLTCSQKLLENIVKERSKRcglkkcglggvvglgIASLYVLWNKRDSLSDFGSQYNPA
Disordered region (IsUnstruct)
*********************LDFDPAYL*******FIF*******RGRFELAFSQIGGSCMLGAAIGGAEGFYKGLRNTTLEGQTGKLRRTQLLNHIMKHGSATASTLGTIAVMYSSFGVLLQTTRGTDDDFNTLTAATATGMLFRSTGNCLVSSLSSFSLHFCDNKTSAVTVPSIRPLTCSQKLLENIVKERSKRCGLKKCGLGGVVGLGIASLYVLWNKR*************
Disordered Region (DISOPRED)
********************YLDFDPAYLPKTSQPEFIFPEGASKQRGRFELAFSQIGGSCMLGAAIGGAEGFYKGLRNTTLEGQTGKLRRTQLLNHIMKHGSATASTLGTIAVMYSSFGVLLQTTRGTDDDFNTLTAATATGMLFRSTGNCLVSSLSSFSLHFCDNKTSAVTVPSIR*****************************VVGLGIASLYVLWNKRDSL**********
Disordered Region (DISEMBL)
***********DTHIQAKSPYLDFDPAYLPKTSQPEFIFPEGASKQRGRFELAFSQIGGSCMLGAAIGGAEGFYKGLRNTTLEGQTGKLRRTQLLNHIMKHGSATASTLGTIAVMYSSFGVLLQTTRGTDDDFNTLTAATATGMLFRSTGNCLVSSLSSFSLHFCDNKTSAVTVPSIRPLTCSQKLLENIVKERSKRCGLKKCGLGGVVGLGIASLYVLWNKRDSLSD********
Disordered Region (DISPRO)
**************IQAKSPYLDFDPAYLPKTSQPEFIFPEGASKQRGRFELAFSQIGGSCMLGAAIGGAEGFYKGLRNTTLEGQTGKLRRTQLLNHIMKHGSATASTLGTIAVMYSSFGVLLQTTRGTDDDFNTLTAATATGMLFRSTGNCLVSSLSSFSLHFCDNKTSAVTVPSIRPLTCSQKLLENIVKERSKRCGLKKCGLGGVVGLGIASLYVLWNKRDSLSDFGS*Y***
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDSFGNSKNLSDTHIQAKSPYLDFDPAYLPKTSQPEFIFPEGASKQRGRFELAFSQIGGSCMLGAAIGGAEGFYKGLRNTTLEGQTGKLRRTQLLNHIMKHGSATASTLGTIAVMYSSFGVLLQTTRGTDDDFNTLTAATATGMLFRSTGNCLVSSLSSFSLHFCDNKTSAVTVPSIRPLTCSQKLLENIVKERSKRCGLKKCGLGGVVGLGIASLYVLWNKRDSLSDFGSQYNPA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	236	2.2.26 [Sep-21-2011]
O35093	209	Mitochondrial import inne	yes	N/A	0.576	0.650	0.5	2e-31
Q9WTQ8	209	Mitochondrial import inne	yes	N/A	0.576	0.650	0.492	3e-31
O14925	209	Mitochondrial import inne	yes	N/A	0.576	0.650	0.492	6e-31
Q5XH94	209	Mitochondrial import inne	yes	N/A	0.576	0.650	0.485	1e-30
A4IFL0	209	Mitochondrial import inne	yes	N/A	0.572	0.645	0.489	2e-30
Q7T2P6	208	Mitochondrial import inne	yes	N/A	0.694	0.788	0.373	2e-30
Q5SRD1	257	Putative mitochondrial im	no	N/A	0.546	0.501	0.503	3e-30
Q5RDD0	209	Mitochondrial import inne	yes	N/A	0.576	0.650	0.485	5e-30
Q6INU6	209	Mitochondrial import inne	N/A	N/A	0.576	0.650	0.478	7e-30
P32897	222	Mitochondrial import inne	yes	N/A	0.521	0.554	0.294	8e-07

>sp|O35093|TIM23_RAT Mitochondrial import inner membrane translocase subunit Tim23 OS=Rattus norvegicus GN=Timm23 PE=2 SV=1

 Score =  135 bits (341), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 69/138 (50%), Positives = 93/138 (67%), Gaps = 2/138 (1%)

Query: 13  THIQAKSPYLDFDPAYLPKTSQPEFIFPEGASKQRGRFELAFSQIGGSCMLGAAIGGAEG 72
           T +   SPYL+ DP YL + +  EFI P GA+K RGRFELAF  IGG CM GAA G   G
Sbjct: 37  TGMNPLSPYLNVDPRYLVQDTD-EFILPTGANKTRGRFELAFFTIGGCCMTGAAFGALNG 95

Query: 73  FYKGLRNTTLEGQTGKLRRTQLLNHIMKHGSATASTLGTIAVMYSSFGVLLQTTRGTDDD 132
              GL+ T     + K R  Q+LN + + G+  A+TLG++A++YS+FGV+++ TRG +DD
Sbjct: 96  LRLGLKETQSMPWS-KPRNVQILNMVTRQGALWANTLGSLALLYSAFGVIIEKTRGAEDD 154

Query: 133 FNTLTAATATGMLFRSTG 150
           FNT+ A T TGML++ TG
Sbjct: 155 FNTVAAGTMTGMLYKCTG 172

Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.
Rattus norvegicus (taxid: 10116)

>sp|Q9WTQ8|TIM23_MOUSE Mitochondrial import inner membrane translocase subunit Tim23 OS=Mus musculus GN=Timm23 PE=2 SV=1

 Score =  135 bits (339), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 68/138 (49%), Positives = 92/138 (66%), Gaps = 2/138 (1%)

Query: 13  THIQAKSPYLDFDPAYLPKTSQPEFIFPEGASKQRGRFELAFSQIGGSCMLGAAIGGAEG 72
           T +   SPYL+ DP YL + +  EFI P GA+K RGRFELAF  IGG CM GAA G   G
Sbjct: 37  TGMNPLSPYLNVDPRYLVQDTD-EFILPTGANKTRGRFELAFFTIGGCCMTGAAFGAMNG 95

Query: 73  FYKGLRNTTLEGQTGKLRRTQLLNHIMKHGSATASTLGTIAVMYSSFGVLLQTTRGTDDD 132
              GL+ T     + K R  Q+LN + + G+  A+TLG++A++YS+FGV+++ TRG +DD
Sbjct: 96  LRLGLKETQSMAWS-KPRNVQILNMVTRQGALWANTLGSLALLYSAFGVIIEKTRGAEDD 154

Query: 133 FNTLTAATATGMLFRSTG 150
            NT+ A T TGML++ TG
Sbjct: 155 LNTVAAGTMTGMLYKCTG 172

Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.

Mus musculus (taxid: 10090)

>sp|O14925|TIM23_HUMAN Mitochondrial import inner membrane translocase subunit Tim23 OS=Homo sapiens GN=TIMM23 PE=1 SV=1

 Score =  134 bits (337), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 68/138 (49%), Positives = 92/138 (66%), Gaps = 2/138 (1%)

Query: 13  THIQAKSPYLDFDPAYLPKTSQPEFIFPEGASKQRGRFELAFSQIGGSCMLGAAIGGAEG 72
           T +   SPYL+ DP YL + +  EFI P GA+K RGRFELAF  IGG CM GAA G   G
Sbjct: 37  TGMNPLSPYLNVDPRYLVQDTD-EFILPTGANKTRGRFELAFFTIGGCCMTGAAFGAMNG 95

Query: 73  FYKGLRNTTLEGQTGKLRRTQLLNHIMKHGSATASTLGTIAVMYSSFGVLLQTTRGTDDD 132
              GL+ T     + K R  Q+LN + + G+  A+TLG++A++YS+FGV+++ TRG +DD
Sbjct: 96  LRLGLKETQNMAWS-KPRNVQILNMVTRQGALWANTLGSLALLYSAFGVIIEKTRGAEDD 154

Query: 133 FNTLTAATATGMLFRSTG 150
            NT+ A T TGML++ TG
Sbjct: 155 LNTVAAGTMTGMLYKCTG 172

Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.

Homo sapiens (taxid: 9606)

>sp|Q5XH94|TIM23_XENTR Mitochondrial import inner membrane translocase subunit Tim23 OS=Xenopus tropicalis GN=timm23 PE=2 SV=1

 Score =  133 bits (335), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 67/138 (48%), Positives = 92/138 (66%), Gaps = 2/138 (1%)

Query: 13  THIQAKSPYLDFDPAYLPKTSQPEFIFPEGASKQRGRFELAFSQIGGSCMLGAAIGGAEG 72
           T +   SPYL+ DP YL + +  EFI P GA+K RGRFELAF  IGG CM GAA G   G
Sbjct: 37  TGMSPLSPYLNVDPRYLVQDND-EFILPTGANKTRGRFELAFFTIGGCCMSGAAFGAVNG 95

Query: 73  FYKGLRNTTLEGQTGKLRRTQLLNHIMKHGSATASTLGTIAVMYSSFGVLLQTTRGTDDD 132
              G + T     + K +  Q+LN + + G+  A+TLG++A++YS+FGV+++ TRG +DD
Sbjct: 96  LRLGFKETQNMAWS-KPKNVQILNMVTRQGALWANTLGSLALLYSAFGVIIEKTRGAEDD 154

Query: 133 FNTLTAATATGMLFRSTG 150
            NT+ A T TGML++STG
Sbjct: 155 LNTIAAGTMTGMLYKSTG 172

Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane (By similarity). Plays an essential role in early embryonic development.

Xenopus tropicalis (taxid: 8364)

>sp|A4IFL0|TIM23_BOVIN Mitochondrial import inner membrane translocase subunit Tim23 OS=Bos taurus GN=TIMM23 PE=2 SV=1

 Score =  132 bits (333), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 67/137 (48%), Positives = 91/137 (66%), Gaps = 2/137 (1%)

Query: 13  THIQAKSPYLDFDPAYLPKTSQPEFIFPEGASKQRGRFELAFSQIGGSCMLGAAIGGAEG 72
           T +   SPYL+ DP YL + +  EFI P GA+K RGRFELAF  IGG CM GAA G   G
Sbjct: 37  TGMNPLSPYLNVDPRYLVQDTD-EFILPTGANKTRGRFELAFFTIGGCCMTGAAFGAMNG 95

Query: 73  FYKGLRNTTLEGQTGKLRRTQLLNHIMKHGSATASTLGTIAVMYSSFGVLLQTTRGTDDD 132
              GL+ T     + K R  Q+LN + + G+  A+TLG++A++YS+FGV+++ TRG +DD
Sbjct: 96  LRLGLKETQNMAWS-KPRNVQILNMVTRQGALWANTLGSLALLYSAFGVIIEKTRGAEDD 154

Query: 133 FNTLTAATATGMLFRST 149
            NT+ A T TGML++ T
Sbjct: 155 LNTVAAGTMTGMLYKCT 171

Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.

Bos taurus (taxid: 9913)

>sp|Q7T2P6|TIM23_DANRE Mitochondrial import inner membrane translocase subunit Tim23 OS=Danio rerio GN=timm23 PE=2 SV=1

 Score =  132 bits (333), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 80/214 (37%), Positives = 108/214 (50%), Gaps = 50/214 (23%)

Query: 13  THIQAKSPYLDFDPAYLPKTSQPEFIFPEGASKQRGRFELAFSQIGGSCMLGAAIGGAEG 72
           T +   SPYL+ DP YL + +  EFI P GA+K RGRFELAF  IGG C+ GAA G   G
Sbjct: 37  TGMSPLSPYLNVDPRYLIQDTD-EFILPTGANKTRGRFELAFFTIGGCCITGAAFGTLNG 95

Query: 73  FYKGLRNTTLEGQTGKLRRTQLLNHIMKHGSATASTLGTIAVMYSSFGVLLQTTRGTDDD 132
              GL  T  +    K R  Q+LN + + G++ A+TLG++A++YS FGV ++  RG +DD
Sbjct: 96  LRMGLSETR-DMPWSKPRNVQILNMVTRQGASWANTLGSVALLYSVFGVAIEKARGAEDD 154

Query: 133 FNTLTAATATGMLFRSTGNCLVSSLSSFSLHFCDNKTSAVTVPSIRPLTCSQKLLENIVK 192
            NT+ A T TGM+F+STG                                          
Sbjct: 155 LNTVAAGTLTGMVFKSTG------------------------------------------ 172

Query: 193 ERSKRCGLKKCGLGGVVGLGIASLYVLWNKRDSL 226
                 GLK    GG++GL ++ LY L+N  D L
Sbjct: 173 ------GLKGVARGGLIGLAMSGLYALYNNWDHL 200

Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane (By similarity). Plays an essential role in early embryonic development.

Danio rerio (taxid: 7955)

>sp|Q5SRD1|TI23B_HUMAN Putative mitochondrial import inner membrane translocase subunit Tim23B OS=Homo sapiens GN=TIMM23B PE=5 SV=2

 Score =  132 bits (331), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 66/131 (50%), Positives = 89/131 (67%), Gaps = 2/131 (1%)

Query: 19  SPYLDFDPAYLPKTSQPEFIFPEGASKQRGRFELAFSQIGGSCMLGAAIGGAEGFYKGLR 78
           SPYL+ DP YL + +  EFI P GA+K RGRFELAF  IGG CM GAA G   G   GL+
Sbjct: 43  SPYLNVDPRYLVQDTD-EFILPTGANKTRGRFELAFFTIGGCCMTGAAFGAMNGLRLGLK 101

Query: 79  NTTLEGQTGKLRRTQLLNHIMKHGSATASTLGTIAVMYSSFGVLLQTTRGTDDDFNTLTA 138
            T     + K R  Q+LN + + G+  A+TLG++A++YS+FGV+++ TRG +DD NT+ A
Sbjct: 102 ETQNMAWS-KPRNVQILNMVTRQGALWANTLGSLALLYSAFGVIIEKTRGAEDDLNTVAA 160

Query: 139 ATATGMLFRST 149
            T TGML++ T
Sbjct: 161 GTMTGMLYKCT 171

May participate in the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. the PAM complex.

Homo sapiens (taxid: 9606)

>sp|Q5RDD0|TIM23_PONAB Mitochondrial import inner membrane translocase subunit Tim23 OS=Pongo abelii GN=TIMM23 PE=2 SV=1

 Score =  130 bits (328), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 67/138 (48%), Positives = 91/138 (65%), Gaps = 2/138 (1%)

Query: 13  THIQAKSPYLDFDPAYLPKTSQPEFIFPEGASKQRGRFELAFSQIGGSCMLGAAIGGAEG 72
           T +   SPYL+ DP YL + +  EFI P GA+K RGRFELAF  IGG CM  AA G   G
Sbjct: 37  TGMNPLSPYLNVDPRYLVQDTD-EFILPTGANKTRGRFELAFFTIGGCCMTVAAFGAMNG 95

Query: 73  FYKGLRNTTLEGQTGKLRRTQLLNHIMKHGSATASTLGTIAVMYSSFGVLLQTTRGTDDD 132
              GL+ T     + K R  Q+LN + + G+  A+TLG++A++YS+FGV+++ TRG +DD
Sbjct: 96  LRLGLKETQNMAWS-KPRNVQILNMVTRQGALWANTLGSLALLYSAFGVIIEKTRGAEDD 154

Query: 133 FNTLTAATATGMLFRSTG 150
            NT+ A T TGML++ TG
Sbjct: 155 LNTVAAGTMTGMLYKCTG 172

Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.

Pongo abelii (taxid: 9601)

>sp|Q6INU6|TIM23_XENLA Mitochondrial import inner membrane translocase subunit Tim23 OS=Xenopus laevis GN=timm23 PE=2 SV=1

 Score =  130 bits (328), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 66/138 (47%), Positives = 91/138 (65%), Gaps = 2/138 (1%)

Query: 13  THIQAKSPYLDFDPAYLPKTSQPEFIFPEGASKQRGRFELAFSQIGGSCMLGAAIGGAEG 72
           T +   SPYL+ DP YL + +  EFI P GA+K RGRFELAF  IGG C+ GAA G   G
Sbjct: 37  TGMSPLSPYLNVDPMYLVQDTD-EFILPTGANKTRGRFELAFFTIGGCCISGAAFGALNG 95

Query: 73  FYKGLRNTTLEGQTGKLRRTQLLNHIMKHGSATASTLGTIAVMYSSFGVLLQTTRGTDDD 132
              G + T       K +  Q+LN + + G+  A+TLG++A++YS+FGV+++ TRG +DD
Sbjct: 96  LKLGFKETQ-NMPWSKPKNVQILNMVTRQGALWANTLGSLALLYSAFGVIVEKTRGAEDD 154

Query: 133 FNTLTAATATGMLFRSTG 150
            NT+ A T TGML++STG
Sbjct: 155 LNTIAAGTMTGMLYKSTG 172

Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane (By similarity). Plays an essential role in early embryonic development.

Xenopus laevis (taxid: 8355)

>sp|P32897|TIM23_YEAST Mitochondrial import inner membrane translocase subunit TIM23 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TIM23 PE=1 SV=1

 Score = 54.3 bits (129), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 56/129 (43%), Gaps = 6/129 (4%)

Query: 21  YLDFDPAYLPKTSQPEFIFPEGASKQRGRFELAFSQIGGSCMLGAAIGGAEGFYKGLRNT 80
           YLD +   L      + + P      RG  +      G   +LG  IGG  G  +GL+N 
Sbjct: 70  YLDLEEEQLSSLEGSQGLIPS-----RGWTDDLCYGTGAVYLLGLGIGGFSGMMQGLQNI 124

Query: 81  TLEGQTGKLRRTQLLNHIMKHGSATASTLGTIAVMYSSFGVLLQTTRGTDDDFNTLTAAT 140
                 GKL+   +LNHI K G    +  G +A+ Y+     +   RG  D   ++ A  
Sbjct: 125 P-PNSPGKLQLNTVLNHITKRGPFLGNNAGILALSYNIINSTIDALRGKHDTAGSIGAGA 183

Query: 141 ATGMLFRST 149
            TG LF+S+
Sbjct: 184 LTGALFKSS 192

Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	236
332376863	202	unknown [Dendroctonus ponderosae]	0.711	0.831	0.550	7e-60
345480483	203	PREDICTED: mitochondrial import inner me	0.690	0.802	0.514	4e-54
91092934	198	PREDICTED: similar to CG40042 CG40042-PA	0.737	0.878	0.540	4e-52
157124656	197	hypothetical protein AaeL_AAEL001852 [Ae	0.766	0.918	0.5	5e-48
383850486	202	PREDICTED: mitochondrial import inner me	0.673	0.787	0.552	3e-47
170049784	197	mitochondrial import inner membrane tran	0.758	0.908	0.502	6e-47
328790117	206	PREDICTED: mitochondrial import inner me	0.716	0.820	0.525	2e-46
380011725	218	PREDICTED: mitochondrial import inner me	0.716	0.775	0.525	3e-46
340712903	206	PREDICTED: mitochondrial import inner me	0.716	0.820	0.520	8e-46
119114634	199	AGAP010210-PA [Anopheles gambiae str. PE	0.720	0.854	0.5	9e-46

>gi|332376863|gb|AEE63571.1| unknown [Dendroctonus ponderosae]

 Score =  236 bits (601), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 120/218 (55%), Positives = 143/218 (65%), Gaps = 50/218 (22%)

Query: 19  SPYLDFDPAYLPKTSQPEFIFPEGASKQRGRFELAFSQIGGSCMLGAAIGGAEGFYKGLR 78
           SPYL+FDP Y+P+ +QPEFIF +G SKQRGRFELAF QIGGSCM+GAA+GG  GFY GL+
Sbjct: 33  SPYLNFDPGYIPQ-AQPEFIFLDGGSKQRGRFELAFGQIGGSCMIGAALGGVSGFYNGLK 91

Query: 79  NTTLEGQTGKLRRTQLLNHIMKHGSATASTLGTIAVMYSSFGVLLQTTRGTDDDFNTLTA 138
            TTL GQTGKLRRTQLLNH+MK GSATA+T G++AV+YS+FGV L   RGTDDD NT+TA
Sbjct: 92  ATTLAGQTGKLRRTQLLNHVMKKGSATANTFGSVAVIYSAFGVFLSWARGTDDDLNTITA 151

Query: 139 ATATGMLFRSTGNCLVSSLSSFSLHFCDNKTSAVTVPSIRPLTCSQKLLENIVKERSKRC 198
           ATATG+L++ST                                                 
Sbjct: 152 ATATGLLYKST------------------------------------------------A 163

Query: 199 GLKKCGLGGVVGLGIASLYVLWNKRDSLSDFGSQYNPA 236
           GLK+CG+GG +GLG + LY LWN +D LSD G  YNPA
Sbjct: 164 GLKRCGMGGAIGLGASVLYALWNNKDRLSDLG-HYNPA 200

Source: Dendroctonus ponderosae

Species: Dendroctonus ponderosae

Genus: Dendroctonus

Family: Curculionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345480483|ref|XP_001602964.2| PREDICTED: mitochondrial import inner membrane translocase subunit Tim23-like [Nasonia vitripennis]

 Score =  217 bits (552), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 109/212 (51%), Positives = 132/212 (62%), Gaps = 49/212 (23%)

Query: 11  SDTHIQAKSPYLDFDPAYLPKTSQPEFIFPEGASKQRGRFELAFSQIGGSCMLGAAIGGA 70
           S   + + SPYL++DP Y P  SQPEFIFPEGA KQRGRFELAFSQIG +C++GA IGGA
Sbjct: 29  SQPGLSSLSPYLNYDPVYFPP-SQPEFIFPEGAVKQRGRFELAFSQIGAACIVGAGIGGA 87

Query: 71  EGFYKGLRNTTLEGQTGKLRRTQLLNHIMKHGSATASTLGTIAVMYSSFGVLLQTTRGTD 130
            GFY+GLR+TTL GQTGKLRRTQ++NH+MKHGS+ A+T G +++MYS FGVL    RG D
Sbjct: 88  TGFYRGLRSTTLAGQTGKLRRTQMINHVMKHGSSLANTFGVVSLMYSGFGVLFSWARGED 147

Query: 131 DDFNTLTAATATGMLFRSTGNCLVSSLSSFSLHFCDNKTSAVTVPSIRPLTCSQKLLENI 190
           D FNTL AATATGMLF+ST                                         
Sbjct: 148 DSFNTLAAATATGMLFKST----------------------------------------- 166

Query: 191 VKERSKRCGLKKCGLGGVVGLGIASLYVLWNK 222
                   GL+KC +GG +G G+A+ Y LWN 
Sbjct: 167 -------AGLRKCAVGGGIGFGLAAAYCLWNN 191

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91092934|ref|XP_971990.1| PREDICTED: similar to CG40042 CG40042-PA [Tribolium castaneum] gi|270003027|gb|EEZ99474.1| hypothetical protein TcasGA2_TC000047 [Tribolium castaneum]

 Score =  210 bits (535), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 121/224 (54%), Positives = 142/224 (63%), Gaps = 50/224 (22%)

Query: 13  THIQAKSPYLDFDPAYLPKTSQPEFIFPEGASKQRGRFELAFSQIGGSCMLGAAIGGAEG 72
           ++ Q  SPYL+FDP+YLP+ +QPEFIF EGASKQRGRFELAF QIGGSCM+GA++GGA G
Sbjct: 23  SYKQFSSPYLNFDPSYLPQ-AQPEFIFLEGASKQRGRFELAFGQIGGSCMIGASVGGASG 81

Query: 73  FYKGLRNTTLEGQTGKLRRTQLLNHIMKHGSATASTLGTIAVMYSSFGVLLQTTRGTDDD 132
           FY GL+ TTL GQTGKLRRTQLLNH+MK GSATA+T G+IAV+YS+FGV L   RG DDD
Sbjct: 82  FYNGLKATTLAGQTGKLRRTQLLNHVMKQGSATANTFGSIAVIYSAFGVFLSWARGADDD 141

Query: 133 FNTLTAATATGMLFRSTGNCLVSSLSSFSLHFCDNKTSAVTVPSIRPLTCSQKLLENIVK 192
            NT+ AATATG L++ST                                           
Sbjct: 142 LNTIIAATATGCLYKST------------------------------------------- 158

Query: 193 ERSKRCGLKKCGLGGVVGLGIASLYVLWNKRDSLSDFGSQYNPA 236
                 GL+KCGLGG VGLG + LY LWN RD  +      NPA
Sbjct: 159 -----AGLRKCGLGGAVGLGASVLYALWNSRDKFTQL-RPLNPA 196

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157124656|ref|XP_001654138.1| hypothetical protein AaeL_AAEL001852 [Aedes aegypti] gi|157135079|ref|XP_001656522.1| hypothetical protein AaeL_AAEL003204 [Aedes aegypti] gi|108881306|gb|EAT45531.1| AAEL003204-PA [Aedes aegypti] gi|108882767|gb|EAT46992.1| AAEL001852-PA [Aedes aegypti]

 Score =  196 bits (499), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 118/236 (50%), Positives = 139/236 (58%), Gaps = 55/236 (23%)

Query: 3   SFGN-SKNLSDTHIQAKSPYLDFDPAYLPKTSQPEFIFPEGASKQRGRFELAFSQIGGSC 61
           SFG  +  L    IQ  SPYL++D  YL   SQPEFIFPEGASKQRGRFELAFSQIG S 
Sbjct: 11  SFGAPAPALPSQQIQPLSPYLNYDTRYL--QSQPEFIFPEGASKQRGRFELAFSQIGSSA 68

Query: 62  MLGAAIGGAEGFYKGLRNTTLEGQTGKLRRTQLLNHIMKHGSATASTLGTIAVMYSSFGV 121
           M+GA IGG  GFY G+R T L  QTGKLRRTQLLNH+MK G+ATA+TLGT+AVMYS FGV
Sbjct: 69  MIGAGIGGVAGFYNGVRATALANQTGKLRRTQLLNHVMKQGAATANTLGTLAVMYSVFGV 128

Query: 122 LLQTTRGTDDDFNTLTAATATGMLFRSTGNCLVSSLSSFSLHFCDNKTSAVTVPSIRPLT 181
           +LQ  RG DD+ NT+ A  ATG+L++ST                                
Sbjct: 129 VLQWARGEDDEINTIAAGGATGLLYKST-------------------------------- 156

Query: 182 CSQKLLENIVKERSKRCGLKKCGLGGVVGLGIASLYVLWN----KRDSLSDFGSQY 233
                            GL+KC +GG +GL ++SLYVLWN        L +  SQY
Sbjct: 157 ----------------AGLRKCAMGGGIGLALSSLYVLWNVTGGSSKKLKELRSQY 196

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383850486|ref|XP_003700826.1| PREDICTED: mitochondrial import inner membrane translocase subunit Tim23-like [Megachile rotundata]

 Score =  194 bits (493), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 115/208 (55%), Positives = 134/208 (64%), Gaps = 49/208 (23%)

Query: 19  SPYLDFDPAYLPKTSQPEFIFPEGASKQRGRFELAFSQIGGSCMLGAAIGGAEGFYKGLR 78
           SPYL+FDPA+LP  SQPE+IFPEGA+KQRGRFELAFSQIG +C++GA IGGA G Y+G++
Sbjct: 33  SPYLNFDPAHLPP-SQPEYIFPEGAAKQRGRFELAFSQIGAACIIGAGIGGATGLYRGMK 91

Query: 79  NTTLEGQTGKLRRTQLLNHIMKHGSATASTLGTIAVMYSSFGVLLQTTRGTDDDFNTLTA 138
            T L GQTGKLRRTQL+NH+MK GSA A+T G ++VMYS FGVLL   RGTDD  NTL A
Sbjct: 92  ATALAGQTGKLRRTQLINHVMKSGSALANTFGIVSVMYSGFGVLLSWARGTDDSVNTLIA 151

Query: 139 ATATGMLFRSTGNCLVSSLSSFSLHFCDNKTSAVTVPSIRPLTCSQKLLENIVKERSKRC 198
           AT TG+LF+ST                                                 
Sbjct: 152 ATGTGILFKST------------------------------------------------T 163

Query: 199 GLKKCGLGGVVGLGIASLYVLWNKRDSL 226
           GL+KC LGG VGLGIASLY LWN RD+L
Sbjct: 164 GLRKCALGGCVGLGIASLYCLWNNRDAL 191

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170049784|ref|XP_001870925.1| mitochondrial import inner membrane translocase subunit Tim23 [Culex quinquefasciatus] gi|167871509|gb|EDS34892.1| mitochondrial import inner membrane translocase subunit Tim23 [Culex quinquefasciatus]

 Score =  193 bits (490), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 117/233 (50%), Positives = 137/233 (58%), Gaps = 54/233 (23%)

Query: 5   GNSKNLSDTHIQAKSPYLDFDPAYLPKTSQPEFIFPEGASKQRGRFELAFSQIGGSCMLG 64
           G S  L    IQ  SPYL++D  YL   SQPEFIFPEGASKQRGRFELAFSQIG S M+G
Sbjct: 14  GPSPALPSQQIQPLSPYLNYDTRYL--QSQPEFIFPEGASKQRGRFELAFSQIGSSAMIG 71

Query: 65  AAIGGAEGFYKGLRNTTLEGQTGKLRRTQLLNHIMKHGSATASTLGTIAVMYSSFGVLLQ 124
           A IGG  GFY G+R T L  QTGKLRRTQLLNH+MK G+ATA+TLGT+AVMYS+FGVLLQ
Sbjct: 72  AGIGGMAGFYNGMRATALANQTGKLRRTQLLNHVMKQGAATANTLGTVAVMYSAFGVLLQ 131

Query: 125 TTRGTDDDFNTLTAATATGMLFRSTGNCLVSSLSSFSLHFCDNKTSAVTVPSIRPLTCSQ 184
             RG DD+ NT+ A  ATG+L++ST                                   
Sbjct: 132 FVRGEDDEINTIAAGGATGLLYKST----------------------------------- 156

Query: 185 KLLENIVKERSKRCGLKKCGLGGVVGLGIASLYVLW----NKRDSLSDFGSQY 233
                         GL+KC LGG +GL ++ LYVLW        +L +  SQY
Sbjct: 157 -------------AGLRKCALGGGIGLALSGLYVLWGITGGSSKNLKELRSQY 196

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328790117|ref|XP_625105.2| PREDICTED: mitochondrial import inner membrane translocase subunit Tim23-like [Apis mellifera]

 Score =  191 bits (485), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/219 (52%), Positives = 138/219 (63%), Gaps = 50/219 (22%)

Query: 19  SPYLDFDPAYLPKTSQPEFIFPEGASKQRGRFELAFSQIGGSCMLGAAIGGAEGFYKGLR 78
           SPYL+FDPAYLP  SQPE+IFPEGA+KQRGRFELAFSQIG +C++GA IGGA G Y+G++
Sbjct: 35  SPYLNFDPAYLPP-SQPEYIFPEGAAKQRGRFELAFSQIGAACIIGAGIGGATGLYRGIK 93

Query: 79  NTTLEGQTGKLRRTQLLNHIMKHGSATASTLGTIAVMYSSFGVLLQTTRGTDDDFNTLTA 138
            T+L  QTGKLRRTQL+NH+MK GS+ A+T G ++VMYS FGVLL   RGTDD  NTL A
Sbjct: 94  ATSLADQTGKLRRTQLINHVMKSGSSLANTFGIVSVMYSGFGVLLSWVRGTDDSLNTLAA 153

Query: 139 ATATGMLFRSTGNCLVSSLSSFSLHFCDNKTSAVTVPSIRPLTCSQKLLENIVKERSKRC 198
           AT TGMLF+ST                                                 
Sbjct: 154 ATGTGMLFKST------------------------------------------------T 165

Query: 199 GLKKCGLGGVVGLGIASLYVLWNKRDSLSDFGSQ-YNPA 236
           GLKKC LGG +GLGIAS+Y LW  R++L +   +  NPA
Sbjct: 166 GLKKCALGGCIGLGIASVYCLWTNREALLELRHRNINPA 204

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380011725|ref|XP_003689948.1| PREDICTED: mitochondrial import inner membrane translocase subunit Tim23-like [Apis florea]

 Score =  190 bits (483), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 115/219 (52%), Positives = 138/219 (63%), Gaps = 50/219 (22%)

Query: 19  SPYLDFDPAYLPKTSQPEFIFPEGASKQRGRFELAFSQIGGSCMLGAAIGGAEGFYKGLR 78
           SPYL+FDPAYLP  SQPE+IFPEGA+KQRGRFELAFSQIG +C++GA IGGA G Y+G++
Sbjct: 35  SPYLNFDPAYLPP-SQPEYIFPEGAAKQRGRFELAFSQIGAACIIGAGIGGATGLYRGIK 93

Query: 79  NTTLEGQTGKLRRTQLLNHIMKHGSATASTLGTIAVMYSSFGVLLQTTRGTDDDFNTLTA 138
            T+L  QTGKLRRTQL+NH+MK GS+ A+T G ++VMYS FGVLL   RGTDD  NTL A
Sbjct: 94  ATSLADQTGKLRRTQLINHVMKSGSSLANTFGIVSVMYSGFGVLLSWVRGTDDSLNTLAA 153

Query: 139 ATATGMLFRSTGNCLVSSLSSFSLHFCDNKTSAVTVPSIRPLTCSQKLLENIVKERSKRC 198
           AT TGMLF+ST                                                 
Sbjct: 154 ATGTGMLFKST------------------------------------------------T 165

Query: 199 GLKKCGLGGVVGLGIASLYVLWNKRDSLSDFGSQ-YNPA 236
           GLKKC LGG +GLGIAS+Y LW  R++L +   +  NPA
Sbjct: 166 GLKKCALGGCIGLGIASVYCLWTNREALLELRHRNINPA 204

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340712903|ref|XP_003394992.1| PREDICTED: mitochondrial import inner membrane translocase subunit Tim23-like [Bombus terrestris]

 Score =  189 bits (480), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 114/219 (52%), Positives = 137/219 (62%), Gaps = 50/219 (22%)

Query: 19  SPYLDFDPAYLPKTSQPEFIFPEGASKQRGRFELAFSQIGGSCMLGAAIGGAEGFYKGLR 78
           SPYL+FDPAYLP  SQPE+IFPEGA+K+RGRFELAFSQIG +C++GA IGGA G Y+G++
Sbjct: 35  SPYLNFDPAYLPP-SQPEYIFPEGAAKRRGRFELAFSQIGAACIIGAGIGGATGLYRGIK 93

Query: 79  NTTLEGQTGKLRRTQLLNHIMKHGSATASTLGTIAVMYSSFGVLLQTTRGTDDDFNTLTA 138
            T+L  QTGKLRRTQL+NH+MK GS+ A+T G ++VMYS FGVLL   RGTDD  NTL A
Sbjct: 94  ATSLADQTGKLRRTQLINHVMKSGSSLANTFGIVSVMYSGFGVLLSWARGTDDSLNTLAA 153

Query: 139 ATATGMLFRSTGNCLVSSLSSFSLHFCDNKTSAVTVPSIRPLTCSQKLLENIVKERSKRC 198
           AT TGMLF+ST                                                 
Sbjct: 154 ATGTGMLFKST------------------------------------------------S 165

Query: 199 GLKKCGLGGVVGLGIASLYVLWNKRDSLSDFGSQ-YNPA 236
           GLKKC LGG VGL IAS+Y LW+ R+ L +   +  NPA
Sbjct: 166 GLKKCALGGCVGLAIASVYCLWSNREVLQELSHRNVNPA 204

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|119114634|ref|XP_319394.3| AGAP010210-PA [Anopheles gambiae str. PEST] gi|116118510|gb|EAA14523.3| AGAP010210-PA [Anopheles gambiae str. PEST]

 Score =  189 bits (480), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 112/224 (50%), Positives = 133/224 (59%), Gaps = 54/224 (24%)

Query: 14  HIQAKSPYLDFDPAYLPKTSQPEFIFPEGASKQRGRFELAFSQIGGSCMLGAAIGGAEGF 73
            +Q  SPYL++D  YL   +QPEFIFPEGASKQRGRFELAFSQIG S M+GA IGGA G 
Sbjct: 25  QLQPLSPYLNYDTRYL--QTQPEFIFPEGASKQRGRFELAFSQIGSSAMIGACIGGAGGL 82

Query: 74  YKGLRNTTLEGQTGKLRRTQLLNHIMKHGSATASTLGTIAVMYSSFGVLLQTTRGTDDDF 133
           Y G+  T L  QTGKLRRTQLLNH+MK G+ATA+T GTIAVMYS+FGVLLQ  RG DD+ 
Sbjct: 83  YNGMNATRLANQTGKLRRTQLLNHVMKQGAATANTFGTIAVMYSAFGVLLQYARGEDDEI 142

Query: 134 NTLTAATATGMLFRSTGNCLVSSLSSFSLHFCDNKTSAVTVPSIRPLTCSQKLLENIVKE 193
           NT+ A  ATG+L++ST                                            
Sbjct: 143 NTIAAGGATGLLYKST-------------------------------------------- 158

Query: 194 RSKRCGLKKCGLGGVVGLGIASLYVLWN----KRDSLSDFGSQY 233
                GL+KC +GG +GL + S+YVLW+        LSD  SQY
Sbjct: 159 ----AGLRKCAIGGGIGLALTSMYVLWSVAGGGSKKLSDLKSQY 198

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	236
UNIPROTKB|E1BR29	202	TIMM23 "Uncharacterized protei	0.576	0.673	0.5	2.6e-31
RGD|3863	209	Timm23 "translocase of inner m	0.576	0.650	0.5	2.6e-31
UNIPROTKB|J9NUG0	175	TIMM23 "Uncharacterized protei	0.576	0.777	0.492	8.8e-31
UNIPROTKB|F1SDW3	209	TIMM23 "Uncharacterized protei	0.576	0.650	0.492	8.8e-31
UNIPROTKB|A4IFL0	209	TIMM23 "Mitochondrial import i	0.576	0.650	0.492	1.1e-30
UNIPROTKB|O14925	209	TIMM23 "Mitochondrial import i	0.576	0.650	0.492	1.1e-30
RGD|1559672	209	RGD1559672 "similar to Translo	0.576	0.650	0.492	1.1e-30
UNIPROTKB|Q5XIW0	209	Timm23 "RCG62963" [Rattus norv	0.576	0.650	0.492	1.1e-30
UNIPROTKB|Q5SRD1	257	TIMM23B "Putative mitochondria	0.572	0.525	0.489	4.9e-30
ZFIN|ZDB-GENE-020419-17	208	timm23 "translocase of inner m	0.576	0.653	0.485	1.3e-29

UNIPROTKB|E1BR29 TIMM23 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
 Identities = 69/138 (50%), Positives = 93/138 (67%)

Query:    13 THIQAKSPYLDFDPAYLPKTSQPEFIFPEGASKQRGRFELAFSQIGGSCMLGAAIGGAEG 72
             T +   SPYL+ DP YL + +  EFI P GA+K RGRFELAF  IGG CM GAA G   G
Sbjct:    36 TGMSPLSPYLNLDPKYLVQDTD-EFILPTGANKTRGRFELAFFTIGGCCMTGAAFGALNG 94

Query:    73 FYKGLRNTTLEGQTGKLRRTQLLNHIMKHGSATASTLGTIAVMYSSFGVLLQTTRGTDDD 132
                GL+ T     + K R  Q+LN + + G+  A+TLG++A++YS+FGV+++ TRG +DD
Sbjct:    95 LRLGLKETQNMAWS-KPRNVQILNMVTRQGALWANTLGSLALLYSAFGVVIEKTRGAEDD 153

Query:   133 FNTLTAATATGMLFRSTG 150
              NT+ A T TGML++STG
Sbjct:   154 LNTIAAGTLTGMLYKSTG 171

GO:0005744 "mitochondrial inner membrane presequence translocase complex" evidence=IEA

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0015450 "P-P-bond-hydrolysis-driven protein transmembrane transporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

RGD|3863 Timm23 "translocase of inner mitochondrial membrane 23 homolog (yeast)" [Rattus norvegicus (taxid:10116)]

 Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
 Identities = 69/138 (50%), Positives = 92/138 (66%)

Query:    13 THIQAKSPYLDFDPAYLPKTSQPEFIFPEGASKQRGRFELAFSQIGGSCMLGAAIGGAEG 72
             T +   SPYL+ DP YL + +  EFI P GA+K RGRFELAF  IGG CM GAA G   G
Sbjct:    37 TGMNPLSPYLNVDPRYLVQDTD-EFILPTGANKTRGRFELAFFTIGGCCMTGAAFGALNG 95

Query:    73 FYKGLRNTTLEGQTGKLRRTQLLNHIMKHGSATASTLGTIAVMYSSFGVLLQTTRGTDDD 132
                GL+ T       K R  Q+LN + + G+  A+TLG++A++YS+FGV+++ TRG +DD
Sbjct:    96 LRLGLKETQ-SMPWSKPRNVQILNMVTRQGALWANTLGSLALLYSAFGVIIEKTRGAEDD 154

Query:   133 FNTLTAATATGMLFRSTG 150
             FNT+ A T TGML++ TG
Sbjct:   155 FNTVAAGTMTGMLYKCTG 172

GO:0005515 "protein binding" evidence=IPI

GO:0005739 "mitochondrion" evidence=ISO

GO:0005743 "mitochondrial inner membrane" evidence=ISO;IDA

GO:0005744 "mitochondrial inner membrane presequence translocase complex" evidence=IEA;ISO

GO:0005758 "mitochondrial intermembrane space" evidence=ISO

GO:0006886 "intracellular protein transport" evidence=IEA;IMP

GO:0015450 "P-P-bond-hydrolysis-driven protein transmembrane transporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0019899 "enzyme binding" evidence=IPI

GO:0031305 "integral to mitochondrial inner membrane" evidence=ISO

UNIPROTKB|J9NUG0 TIMM23 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
 Identities = 68/138 (49%), Positives = 91/138 (65%)

Query:    13 THIQAKSPYLDFDPAYLPKTSQPEFIFPEGASKQRGRFELAFSQIGGSCMLGAAIGGAEG 72
             T +   SPYL+ DP YL + +  EFI P GA+K RGRFELAF  IGG CM GAA G   G
Sbjct:    37 TGMNPLSPYLNVDPRYLVQDTD-EFILPTGANKTRGRFELAFFTIGGCCMTGAAFGAMNG 95

Query:    73 FYKGLRNTTLEGQTGKLRRTQLLNHIMKHGSATASTLGTIAVMYSSFGVLLQTTRGTDDD 132
                GL+ T       K R  Q+LN + + G+  A+TLG++A++YS+FGV+++ TRG +DD
Sbjct:    96 LRLGLKETQ-NMSWSKPRNVQILNMVTRQGALWANTLGSLALLYSAFGVIIEKTRGAEDD 154

Query:   133 FNTLTAATATGMLFRSTG 150
              NT+ A T TGML++ TG
Sbjct:   155 LNTVAAGTMTGMLYKCTG 172

GO:0016021 "integral to membrane" evidence=IEA

GO:0015450 "P-P-bond-hydrolysis-driven protein transmembrane transporter activity" evidence=IEA

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0005744 "mitochondrial inner membrane presequence translocase complex" evidence=IEA

UNIPROTKB|F1SDW3 TIMM23 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
 Identities = 68/138 (49%), Positives = 92/138 (66%)

Query:    13 THIQAKSPYLDFDPAYLPKTSQPEFIFPEGASKQRGRFELAFSQIGGSCMLGAAIGGAEG 72
             T +   SPYL+ DP YL + +  EFI P GA+K RGRFELAF  IGG CM GAA G   G
Sbjct:    37 TGMNPLSPYLNVDPRYLVQDTD-EFILPTGANKTRGRFELAFFTIGGCCMTGAAFGAVNG 95

Query:    73 FYKGLRNTTLEGQTGKLRRTQLLNHIMKHGSATASTLGTIAVMYSSFGVLLQTTRGTDDD 132
                GL+ T     + K R  Q+LN + + G+  A+TLG++A++YS+FGV+++ TRG +DD
Sbjct:    96 LRLGLKETQNMAWS-KPRNVQILNMVTRQGALWANTLGSLALLYSAFGVIIEKTRGAEDD 154

Query:   133 FNTLTAATATGMLFRSTG 150
              NT+ A T TGML++ TG
Sbjct:   155 LNTVAAGTMTGMLYKCTG 172

GO:0015450 "P-P-bond-hydrolysis-driven protein transmembrane transporter activity" evidence=IEA

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0005744 "mitochondrial inner membrane presequence translocase complex" evidence=IEA

UNIPROTKB|A4IFL0 TIMM23 "Mitochondrial import inner membrane translocase subunit Tim23" [Bos taurus (taxid:9913)]

 Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
 Identities = 68/138 (49%), Positives = 92/138 (66%)

Query:    13 THIQAKSPYLDFDPAYLPKTSQPEFIFPEGASKQRGRFELAFSQIGGSCMLGAAIGGAEG 72
             T +   SPYL+ DP YL + +  EFI P GA+K RGRFELAF  IGG CM GAA G   G
Sbjct:    37 TGMNPLSPYLNVDPRYLVQDTD-EFILPTGANKTRGRFELAFFTIGGCCMTGAAFGAMNG 95

Query:    73 FYKGLRNTTLEGQTGKLRRTQLLNHIMKHGSATASTLGTIAVMYSSFGVLLQTTRGTDDD 132
                GL+ T     + K R  Q+LN + + G+  A+TLG++A++YS+FGV+++ TRG +DD
Sbjct:    96 LRLGLKETQNMAWS-KPRNVQILNMVTRQGALWANTLGSLALLYSAFGVIIEKTRGAEDD 154

Query:   133 FNTLTAATATGMLFRSTG 150
              NT+ A T TGML++ TG
Sbjct:   155 LNTVAAGTMTGMLYKCTG 172

GO:0016021 "integral to membrane" evidence=IEA

GO:0015450 "P-P-bond-hydrolysis-driven protein transmembrane transporter activity" evidence=IEA

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0005744 "mitochondrial inner membrane presequence translocase complex" evidence=IEA

UNIPROTKB|O14925 TIMM23 "Mitochondrial import inner membrane translocase subunit Tim23" [Homo sapiens (taxid:9606)]

 Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
 Identities = 68/138 (49%), Positives = 92/138 (66%)

Query:    13 THIQAKSPYLDFDPAYLPKTSQPEFIFPEGASKQRGRFELAFSQIGGSCMLGAAIGGAEG 72
             T +   SPYL+ DP YL + +  EFI P GA+K RGRFELAF  IGG CM GAA G   G
Sbjct:    37 TGMNPLSPYLNVDPRYLVQDTD-EFILPTGANKTRGRFELAFFTIGGCCMTGAAFGAMNG 95

Query:    73 FYKGLRNTTLEGQTGKLRRTQLLNHIMKHGSATASTLGTIAVMYSSFGVLLQTTRGTDDD 132
                GL+ T     + K R  Q+LN + + G+  A+TLG++A++YS+FGV+++ TRG +DD
Sbjct:    96 LRLGLKETQNMAWS-KPRNVQILNMVTRQGALWANTLGSLALLYSAFGVIIEKTRGAEDD 154

Query:   133 FNTLTAATATGMLFRSTG 150
              NT+ A T TGML++ TG
Sbjct:   155 LNTVAAGTMTGMLYKCTG 172

GO:0015450 "P-P-bond-hydrolysis-driven protein transmembrane transporter activity" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005758 "mitochondrial intermembrane space" evidence=IDA

GO:0006626 "protein targeting to mitochondrion" evidence=TAS

GO:0044267 "cellular protein metabolic process" evidence=TAS

GO:0005743 "mitochondrial inner membrane" evidence=TAS

GO:0031305 "integral to mitochondrial inner membrane" evidence=IDA

GO:0005744 "mitochondrial inner membrane presequence translocase complex" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

RGD|1559672 RGD1559672 "similar to Translocase of inner mitochondrial membrane 23 homolog" [Rattus norvegicus (taxid:10116)]

 Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
 Identities = 68/138 (49%), Positives = 91/138 (65%)

Query:    13 THIQAKSPYLDFDPAYLPKTSQPEFIFPEGASKQRGRFELAFSQIGGSCMLGAAIGGAEG 72
             T +   SPYL+ DP YL + +  EFI P GA+K RGRFELAF  IGG CM GAA G   G
Sbjct:    37 TGMNPLSPYLNVDPRYLVQDTD-EFILPTGANKTRGRFELAFFTIGGCCMTGAAFGALNG 95

Query:    73 FYKGLRNTTLEGQTGKLRRTQLLNHIMKHGSATASTLGTIAVMYSSFGVLLQTTRGTDDD 132
                GL+ T       K R  Q+LN + + G+  A+TLG++A++YS+FGV+++ TRG +DD
Sbjct:    96 LRLGLKETQ-SMPWSKPRNVQILNMVTRQGALWANTLGSLALLYSAFGVIIEKTRGAEDD 154

Query:   133 FNTLTAATATGMLFRSTG 150
              NT+ A T TGML++ TG
Sbjct:   155 LNTVAAGTMTGMLYKCTG 172

GO:0005744 "mitochondrial inner membrane presequence translocase complex" evidence=IEA

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0015450 "P-P-bond-hydrolysis-driven protein transmembrane transporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q5XIW0 Timm23 "RCG62963" [Rattus norvegicus (taxid:10116)]

 Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
 Identities = 68/138 (49%), Positives = 91/138 (65%)

Query:    13 THIQAKSPYLDFDPAYLPKTSQPEFIFPEGASKQRGRFELAFSQIGGSCMLGAAIGGAEG 72
             T +   SPYL+ DP YL + +  EFI P GA+K RGRFELAF  IGG CM GAA G   G
Sbjct:    37 TGMNPLSPYLNVDPRYLVQDTD-EFILPTGANKTRGRFELAFFTIGGCCMTGAAFGALNG 95

Query:    73 FYKGLRNTTLEGQTGKLRRTQLLNHIMKHGSATASTLGTIAVMYSSFGVLLQTTRGTDDD 132
                GL+ T       K R  Q+LN + + G+  A+TLG++A++YS+FGV+++ TRG +DD
Sbjct:    96 LRLGLKETQ-SMPWSKPRNVQILNMVTRQGALWANTLGSLALLYSAFGVIIEKTRGAEDD 154

Query:   133 FNTLTAATATGMLFRSTG 150
              NT+ A T TGML++ TG
Sbjct:   155 LNTVAAGTMTGMLYKCTG 172

GO:0005744 "mitochondrial inner membrane presequence translocase complex" evidence=IEA

GO:0015450 "P-P-bond-hydrolysis-driven protein transmembrane transporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q5SRD1 TIMM23B "Putative mitochondrial import inner membrane translocase subunit Tim23B" [Homo sapiens (taxid:9606)]

 Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
 Identities = 67/137 (48%), Positives = 91/137 (66%)

Query:    13 THIQAKSPYLDFDPAYLPKTSQPEFIFPEGASKQRGRFELAFSQIGGSCMLGAAIGGAEG 72
             T +   SPYL+ DP YL + +  EFI P GA+K RGRFELAF  IGG CM GAA G   G
Sbjct:    37 TGMNPLSPYLNVDPRYLVQDTD-EFILPTGANKTRGRFELAFFTIGGCCMTGAAFGAMNG 95

Query:    73 FYKGLRNTTLEGQTGKLRRTQLLNHIMKHGSATASTLGTIAVMYSSFGVLLQTTRGTDDD 132
                GL+ T     + K R  Q+LN + + G+  A+TLG++A++YS+FGV+++ TRG +DD
Sbjct:    96 LRLGLKETQNMAWS-KPRNVQILNMVTRQGALWANTLGSLALLYSAFGVIIEKTRGAEDD 154

Query:   133 FNTLTAATATGMLFRST 149
              NT+ A T TGML++ T
Sbjct:   155 LNTVAAGTMTGMLYKCT 171

GO:0005744 "mitochondrial inner membrane presequence translocase complex" evidence=IEA

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0015450 "P-P-bond-hydrolysis-driven protein transmembrane transporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

ZFIN|ZDB-GENE-020419-17 timm23 "translocase of inner mitochondrial membrane 23 homolog (yeast)" [Danio rerio (taxid:7955)]

 Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
 Identities = 67/138 (48%), Positives = 90/138 (65%)

Query:    13 THIQAKSPYLDFDPAYLPKTSQPEFIFPEGASKQRGRFELAFSQIGGSCMLGAAIGGAEG 72
             T +   SPYL+ DP YL + +  EFI P GA+K RGRFELAF  IGG C+ GAA G   G
Sbjct:    37 TGMSPLSPYLNVDPRYLIQDTD-EFILPTGANKTRGRFELAFFTIGGCCITGAAFGTLNG 95

Query:    73 FYKGLRNTTLEGQTGKLRRTQLLNHIMKHGSATASTLGTIAVMYSSFGVLLQTTRGTDDD 132
                GL  T  +    K R  Q+LN + + G++ A+TLG++A++YS FGV ++  RG +DD
Sbjct:    96 LRMGLSETR-DMPWSKPRNVQILNMVTRQGASWANTLGSVALLYSVFGVAIEKARGAEDD 154

Query:   133 FNTLTAATATGMLFRSTG 150
              NT+ A T TGM+F+STG
Sbjct:   155 LNTVAAGTLTGMVFKSTG 172

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0015450 "P-P-bond-hydrolysis-driven protein transmembrane transporter activity" evidence=IEA

GO:0005744 "mitochondrial inner membrane presequence translocase complex" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q7T2P6	TIM23_DANRE	No assigned EC number	0.3738	0.6949	0.7884	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	236
TIGR00983	149	TIGR00983, 3a0801s02tim23, mitochondrial import in	6e-31
pfam02466	128	pfam02466, Tim17, Tim17/Tim22/Tim23/Pmp24 family	2e-18
COG5596	191	COG5596, TIM22, Mitochondrial import inner membran	0.004

>gnl|CDD|130056 TIGR00983, 3a0801s02tim23, mitochondrial import inner membrane translocase subunit tim23

 Score =  111 bits (278), Expect = 6e-31
 Identities = 47/129 (36%), Positives = 66/129 (51%), Gaps = 2/129 (1%)

Query: 22  LDFDPAYLPKTSQPEFIFPEGASKQRGRFELAFSQIGGSCMLGAAIGGAEGFYKGLRNTT 81
           LD DP YL    + E     GA+  RG FE      G   + G AIG   G   GL+ T 
Sbjct: 4   LDKDPEYL-VQEEDELSLLTGANPSRGWFEDLCFGTGTCYLTGLAIGALNGLRLGLKETQ 62

Query: 82  LEGQTGKLRRTQLLNHIMKHGSATASTLGTIAVMYSSFGVLLQTTRGTDDDFNTLTAATA 141
                 KLR  Q+LN + + G    +TLG +A++Y+    +++ TRG  DDFN++ A   
Sbjct: 63  -SMPWTKLRLNQILNMVTRRGPFWGNTLGILALVYNGINSIIEATRGKHDDFNSVAAGAL 121

Query: 142 TGMLFRSTG 150
           TG L++ST 
Sbjct: 122 TGALYKSTR 130

[Transport and binding proteins, Amino acids, peptides and amines]. Length = 149

>gnl|CDD|217053 pfam02466, Tim17, Tim17/Tim22/Tim23/Pmp24 family

 Score = 78.1 bits (193), Expect = 2e-18
 Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 1/103 (0%)

Query: 48  GRFELAFSQIGGSCMLGAAIGGAEGFYKGLRNTTLEGQTGKLRRTQLLNHIMKHGSATAS 107
              E      GG  ++GA  GG  G   GL N    G   KLR   +LN   + G +  +
Sbjct: 1   PCPERIVYDTGGGFLMGAVYGGFFGAPHGLVNALRSG-PLKLRLNGVLNATGRRGPSHGN 59

Query: 108 TLGTIAVMYSSFGVLLQTTRGTDDDFNTLTAATATGMLFRSTG 150
                  +YS     L+  RG +D +N++ A   TG +    G
Sbjct: 60  NFAVFGGLYSGIECALEKLRGKEDPWNSIIAGALTGAVLGLRG 102

The pre-protein translocase of the mitochondrial outer membrane (Tom) allows the import of pre-proteins from the cytoplasm. Tom forms a complex with a number of proteins, including Tim17. Tim17 and Tim23 are thought to form the translocation channel of the inner membrane. This family includes Tim17, Tim22 and Tim23. This family also includes Pmp24 a peroxisomal protein. The involvement of this domain in the targeting of PMP24 remains to be proved. PMP24 was known as Pmp27 in. Length = 128

>gnl|CDD|227883 COG5596, TIM22, Mitochondrial import inner membrane translocase, subunit TIM22 [Posttranslational modification, protein turnover, chaperones]

 Score = 36.8 bits (85), Expect = 0.004
 Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 4/87 (4%)

Query: 63  LGAAIGGAEGFYKGLRNTTLEGQTGKLRRTQLLNHIMKHGSATASTLGTIAVMYSSFGVL 122
           LG   GG  G   GL +T          + QL N+  K G  T   LG + ++Y+    +
Sbjct: 81  LGLNFGGVWG---GLFSTIDCTPFRLQLKEQL-NNAGKRGFFTGKNLGVLGLIYAGINSI 136

Query: 123 LQTTRGTDDDFNTLTAATATGMLFRST 149
           +   R   D  N + A   TG    S+
Sbjct: 137 ITALRAKHDIANAIAAGAFTGAALASS 163

Length = 191

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	236
KOG3324|consensus	206		100.0
TIGR00983	149	3a0801s02tim23 mitochondrial import inner membrane	100.0
PTZ00236	164	mitochondrial import inner membrane translocase su	99.94
TIGR00980	170	3a0801so1tim17 mitochondrial import inner membrane	99.92
PF02466	128	Tim17: Tim17/Tim22/Tim23/Pmp24 family; InterPro: I	99.9
KOG3225|consensus	168		99.83
KOG1652|consensus	183		99.79
COG5596	191	TIM22 Mitochondrial import inner membrane transloc	99.79
KOG4608|consensus	270		98.34
COG5596	191	TIM22 Mitochondrial import inner membrane transloc	94.02
PF10247	67	Romo1: Reactive mitochondrial oxygen species modul	93.82
KOG4096|consensus	75		92.32
PF12732	74	YtxH: YtxH-like protein; InterPro: IPR024623 This	89.79
TIGR00983	149	3a0801s02tim23 mitochondrial import inner membrane	88.88

>KOG3324|consensus

Probab=100.00  E-value=3.5e-44  Score=310.82  Aligned_cols=162  Identities=39%  Similarity=0.627  Sum_probs=149.1

Q ss_pred             cCCCCCCCCC------CCCCCCCCCCccccccch-hhhhhhHHHhhhhhhhHhHhhhHHHHHHHHHhhhhccccCCChhh
Q psy7109          16 QAKSPYLDFD------PAYLPKTSQPEFIFPEGA-SKQRGRFELAFSQIGGSCMLGAAIGGAEGFYKGLRNTTLEGQTGK   88 (236)
Q Consensus        16 ~~~~py~~~d------p~~Lpt~~~PEfIfpEea-~k~Rg~~ee~~~~tG~syl~G~~lGg~~Gl~~G~~~~p~~g~t~K   88 (236)
                      ++++||+++|      |.|+-++ |||||||||. .+.|+|+|++|+.||++|+.|+++|+++|++.|+++++ .+.+.|
T Consensus        34 ~~l~P~~~ld~~~n~d~ly~~~~-~pefl~~~eg~~~~rgw~E~l~f~tG~~yl~G~~iGa~~G~~~Glk~~e-~~~~~K  111 (206)
T KOG3324|consen   34 RPLNPYQPLDKPLNVDYLYLLPD-QPEFLFPEEGAIKRRGWFENLTFGTGWAYLTGSAIGAFNGLILGLKNTE-NGASGK  111 (206)
T ss_pred             cccCcccccccccccchhhhccC-CccccCchhccccccchhhhhheeccchhccchhhhhHHHHHHhhhcCC-CCCccc
Confidence            5677777665      4554443 9999999665 68889999999999999999999999999999999998 688999


Q ss_pred             hHHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhhhhhhcccCCCchhHHHHHHhhhhhhhcccccccccccccccccccCC
Q psy7109          89 LRRTQLLNHIMKHGSATASTLGTIAVMYSSFGVLLQTTRGTDDDFNTLTAATATGMLFRSTGNCLVSSLSSFSLHFCDNK  168 (236)
Q Consensus        89 lRln~iLN~~gkrG~~~GNsfGvigllYSg~ec~ie~~RgK~D~~NSIaAGalTGaLyks~~~~~~~~~~~~~~~~~~~~  168 (236)
                      +|+|+|||+++++|+.|||++|++++||+++|++|++.|++||++|+|+||++||+|||++                   
T Consensus       112 lr~nrILN~~t~~G~~~gN~lG~laL~YsaiesgI~~~R~~dd~lnsv~AGalTGalyrs~-------------------  172 (206)
T KOG3324|consen  112 LRLNRILNSVTRRGRFWGNTLGSLALMYSAIESGIEATRGKDDDLNSVAAGALTGALYRST-------------------  172 (206)
T ss_pred             hhHHHHhhhccccccccccchhHHHHHHHHHHHHHHHhhccccchhhhhhhhhhhhhhhcC-------------------
Confidence            9999999999999999999999999999999999999999999999999999999999999                   


Q ss_pred             CcccccCccCCcchhhHHHHHHHHhhhhccCchhhhhhHhHHHHHHHHHHHHhcCCccc
Q psy7109         169 TSAVTVPSIRPLTCSQKLLENIVKERSKRCGLKKCGLGGVVGLGIASLYVLWNKRDSLS  227 (236)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~  227 (236)
                                                   .|||.+++++++|+++|++|++.+++.+.+
T Consensus       173 -----------------------------~Glr~~av~ga~g~~aa~aw~l~k~~~~~r  202 (206)
T KOG3324|consen  173 -----------------------------RGLRAAAVAGAVGGTAAAAWTLGKRIVKRR  202 (206)
T ss_pred             -----------------------------CCchHHHHHHHHHHHHHHHHHHhhhHHhhh
Confidence                                         899999999999999999999998876654

>TIGR00983 3a0801s02tim23 mitochondrial import inner membrane translocase subunit tim23

Probab=100.00  E-value=1.9e-43  Score=295.51  Aligned_cols=149  Identities=36%  Similarity=0.585  Sum_probs=142.7

Q ss_pred             CCCCCCCCCCCCCCCCCCccccccchhhhhhhHHHhhhhhhhHhHhhhHHHHHHHHHhhhhccccCCChhhhHHHHHHHH
Q psy7109          18 KSPYLDFDPAYLPKTSQPEFIFPEGASKQRGRFELAFSQIGGSCMLGAAIGGAEGFYKGLRNTTLEGQTGKLRRTQLLNH   97 (236)
Q Consensus        18 ~~py~~~dp~~Lpt~~~PEfIfpEea~k~Rg~~ee~~~~tG~syl~G~~lGg~~Gl~~G~~~~p~~g~t~KlRln~iLN~   97 (236)
                      ++| +|.||+||.++ +||+||||++.++|+|.|++|+.||++|++|+++|+++|+++|++++| .+.+.|+|+|++||+
T Consensus         1 l~~-l~~~~~~l~~~-~~~~~~~~g~~~~R~~~e~~~~~~G~ay~~G~~~Gg~~Gl~~G~~~~~-~~~~~k~rln~~ln~   77 (149)
T TIGR00983         1 LAP-LDKDPEYLVQE-EDELSLLTGANPSRGWFEDLCFGTGTCYLTGLAIGALNGLRLGLKETQ-SMPWTKLRLNQILNM   77 (149)
T ss_pred             CCC-CCCCcHHHcCc-chhhcCCCCCCCCCChhhhhhhhHhHHHHHHHHHHHHHHHHHHHhhCC-CCCcHHHHHHHHHHH
Confidence            367 79999999886 999999999989999999999999999999999999999999999987 566889999999999


Q ss_pred             HhhhhhhhhhHHHHHHHHHhhhhhhhhhcccCCCchhHHHHHHhhhhhhhcccccccccccccccccccCCCcccccCcc
Q psy7109          98 IMKHGSATASTLGTIAVMYSSFGVLLQTTRGTDDDFNTLTAATATGMLFRSTGNCLVSSLSSFSLHFCDNKTSAVTVPSI  177 (236)
Q Consensus        98 ~gkrG~~~GNsfGvigllYSg~ec~ie~~RgK~D~~NSIaAGalTGaLyks~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (236)
                      ++++++++||+||+|+++|+++||+++++|+|||++|+|+||++||++||++                            
T Consensus        78 ~~~~g~~~G~~~g~~g~lys~~e~~i~~~R~k~D~~Nsv~AGa~TGal~~~~----------------------------  129 (149)
T TIGR00983        78 VTRRGPFWGNTLGILALVYNGINSIIEATRGKHDDFNSVAAGALTGALYKST----------------------------  129 (149)
T ss_pred             HHhHhHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHhHHHHHHHHHHHHhc----------------------------
Confidence            9999999999999999999999999999999999999999999999999999                            


Q ss_pred             CCcchhhHHHHHHHHhhhhccCchhhhhhHhHHHHHHHHH
Q psy7109         178 RPLTCSQKLLENIVKERSKRCGLKKCGLGGVVGLGIASLY  217 (236)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~  217 (236)
                                          +|+|+|++++++|++++++|
T Consensus       130 --------------------~G~r~~~~g~~~G~~l~~~~  149 (149)
T TIGR00983       130 --------------------RGLRGMARSGALGATAAGVW  149 (149)
T ss_pred             --------------------cChHHHHHHhHHHHHHhhcC
Confidence                                89999999999999999986

>PTZ00236 mitochondrial import inner membrane translocase subunit tim17; Provisional

Probab=99.94  E-value=5.9e-27  Score=199.18  Aligned_cols=122  Identities=20%  Similarity=0.281  Sum_probs=110.3

Q ss_pred             hhhhhHHHh-hhhhhhHhHhhhHHHHHHHHHhhhhccccCCChhhhHHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhhhh
Q psy7109          45 KQRGRFELA-FSQIGGSCMLGAAIGGAEGFYKGLRNTTLEGQTGKLRRTQLLNHIMKHGSATASTLGTIAVMYSSFGVLL  123 (236)
Q Consensus        45 k~Rg~~ee~-~~~tG~syl~G~~lGg~~Gl~~G~~~~p~~g~t~KlRln~iLN~~gkrG~~~GNsfGvigllYSg~ec~i  123 (236)
                      ..|..+-.- ..++|.+|++|++.|+++++++|++++| .    +.|++.+++.++++++++|++||+||++|+++||++
T Consensus         6 ~~r~pcp~ri~dd~G~af~~G~vgG~~~~~~~G~rnsp-~----g~rl~g~l~~~~~rap~~g~~FAv~G~~ys~~ec~~   80 (164)
T PTZ00236          6 LSREPCPDRIIEDMGGAFSMGCIGGFIWHFLKGMRNSP-K----GERFSGGFYLLRKRAPILGGNFAIWGGLFSTFDCTL   80 (164)
T ss_pred             hCcCCCchHHHHhccHHHHHHHHHHHHHHHHHHHHhCC-C----cchHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHH
Confidence            334444433 3489999999999999999999999997 3    358999999999999999999999999999999999


Q ss_pred             hhcccCCCchhHHHHHHhhhhhhhcccccccccccccccccccCCCcccccCccCCcchhhHHHHHHHHhhhhccCchhh
Q psy7109         124 QTTRGTDDDFNTLTAATATGMLFRSTGNCLVSSLSSFSLHFCDNKTSAVTVPSIRPLTCSQKLLENIVKERSKRCGLKKC  203 (236)
Q Consensus       124 e~~RgK~D~~NSIaAGalTGaLyks~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  203 (236)
                      +++|+|||+||+|+||++||++|+++                                                .|+|++
T Consensus        81 ~~~R~K~D~~Nsi~AG~~TGa~l~~r------------------------------------------------~G~~~~  112 (164)
T PTZ00236         81 QYLRGKEDHWNAIASGFFTGGVLAIR------------------------------------------------GGWRSA  112 (164)
T ss_pred             HHHHccCchHHHHHHHHHHHHHHHHh------------------------------------------------cChHHH
Confidence            99999999999999999999999999                                                899999


Q ss_pred             hhhHhHHHHHHHHHHH
Q psy7109         204 GLGGVVGLGIASLYVL  219 (236)
Q Consensus       204 ~~~~~~g~~~~~~~~~  219 (236)
                      +.++++|+++++++..
T Consensus       113 ~~~a~~Gg~~~~~ie~  128 (164)
T PTZ00236        113 VRNAIFGGILLGIIEL  128 (164)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999999887763

>TIGR00980 3a0801so1tim17 mitochondrial import inner membrane translocase subunit tim17

Probab=99.92  E-value=3e-25  Score=189.63  Aligned_cols=110  Identities=17%  Similarity=0.313  Sum_probs=105.0

Q ss_pred             hhhhHhHhhhHHHHHHHHHhhhhccccCCChhhhHHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhhhhhhcccCCCchhH
Q psy7109          56 QIGGSCMLGAAIGGAEGFYKGLRNTTLEGQTGKLRRTQLLNHIMKHGSATASTLGTIAVMYSSFGVLLQTTRGTDDDFNT  135 (236)
Q Consensus        56 ~tG~syl~G~~lGg~~Gl~~G~~~~p~~g~t~KlRln~iLN~~gkrG~~~GNsfGvigllYSg~ec~ie~~RgK~D~~NS  135 (236)
                      .+|.+|.+|++.|++||+++|++++| .+    .|++.++|+++.+++++||+||+|+++|+++||+++++|+|||+||+
T Consensus        16 ~~G~af~~G~~~G~~~g~~~G~rnsp-~g----~rl~g~l~av~~rap~~g~~Fav~g~lys~~ec~i~~~R~KeD~~Ns   90 (170)
T TIGR00980        16 DFGGAFAMGTIGGSIFQAFKGFRNSP-KG----EKLVGAMRAIKTRAPVLGGNFAVWGGLFSTIDCAVVAIRKKEDPWNS   90 (170)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHhhcCC-cc----chhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHH
Confidence            89999999999999999999999987 32    37889999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhhhhhcccccccccccccccccccCCCcccccCccCCcchhhHHHHHHHHhhhhccCchhhhhhHhHHHHHHH
Q psy7109         136 LTAATATGMLFRSTGNCLVSSLSSFSLHFCDNKTSAVTVPSIRPLTCSQKLLENIVKERSKRCGLKKCGLGGVVGLGIAS  215 (236)
Q Consensus       136 IaAGalTGaLyks~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~  215 (236)
                      |+||++||++|+++                                                .|+|.++.++++|+++-+
T Consensus        91 iiAG~~TGa~l~~r------------------------------------------------~G~~a~~~~aa~gg~~la  122 (170)
T TIGR00980        91 IISGFLTGAALAVR------------------------------------------------GGPRAMRGSAILGACILA  122 (170)
T ss_pred             HHHHHHHHHHHHhc------------------------------------------------cChHHHHHHHHHHHHHHH
Confidence            99999999999999                                                899999999999999888


Q ss_pred             HHH
Q psy7109         216 LYV  218 (236)
Q Consensus       216 ~~~  218 (236)
                      ++.
T Consensus       123 ~ie  125 (170)
T TIGR00980       123 VIE  125 (170)
T ss_pred             HHH
Confidence            877

>PF02466 Tim17: Tim17/Tim22/Tim23/Pmp24 family; InterPro: IPR003397 The membrane-embedded multi-protein complexes of mitochondria mediate the transport of nuclear-encoded proteins across and into the outer or inner mitochondrial membranes []

Probab=99.90  E-value=2.4e-23  Score=165.66  Aligned_cols=126  Identities=22%  Similarity=0.377  Sum_probs=115.4

Q ss_pred             hHHHhhhhhhhHhHhhhHHHHHHHHHhhhhccccCCChhhhHHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhhhhhhccc
Q psy7109          49 RFELAFSQIGGSCMLGAAIGGAEGFYKGLRNTTLEGQTGKLRRTQLLNHIMKHGSATASTLGTIAVMYSSFGVLLQTTRG  128 (236)
Q Consensus        49 ~~ee~~~~tG~syl~G~~lGg~~Gl~~G~~~~p~~g~t~KlRln~iLN~~gkrG~~~GNsfGvigllYSg~ec~ie~~Rg  128 (236)
                      +.++.+..++.+|+.|++.|++.+.+++....+ ...+.|+|++.+++.++++++++|++||.++++|+++||.++.+|+
T Consensus         2 c~~~~~~~~~~g~~~G~~~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~y~~~~~~l~~~R~   80 (128)
T PF02466_consen    2 CPERILDSTGKGFVAGAVFGGFIGAISAFTRPP-RGSPLRPRLRSILNAVGRRGPRHGARFGSFGGLYSGIECALERLRG   80 (128)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cCCcHhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            356778899999999999999999998855444 4567788999999999999999999999999999999999999999


Q ss_pred             CCCchhHHHHHHhhhhhhhcccccccccccccccccccCCCcccccCccCCcchhhHHHHHHHHhhhhccCchhhhhhHh
Q psy7109         129 TDDDFNTLTAATATGMLFRSTGNCLVSSLSSFSLHFCDNKTSAVTVPSIRPLTCSQKLLENIVKERSKRCGLKKCGLGGV  208 (236)
Q Consensus       129 K~D~~NSIaAGalTGaLyks~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  208 (236)
                      |||+||+++||++||++|+.+                                                .|++.++.+++
T Consensus        81 k~D~~N~~~aG~~aGa~~~~~------------------------------------------------~g~~~~~~~~~  112 (128)
T PF02466_consen   81 KDDPWNSAIAGAAAGAVLGLR------------------------------------------------SGPRGMASGAA  112 (128)
T ss_pred             ccccchhHHHHHHHHHHHHhc------------------------------------------------cChHHHHHHHH
Confidence            999999999999999999999                                                79999999999


Q ss_pred             HHHHHHHHHHHHhcC
Q psy7109         209 VGLGIASLYVLWNKR  223 (236)
Q Consensus       209 ~g~~~~~~~~~~~~~  223 (236)
                      +++++++++.++.++
T Consensus       113 ~~a~~~~~~~~~~~~  127 (128)
T PF02466_consen  113 LGAAFAAAVEYYGRM  127 (128)
T ss_pred             HHHHHHHHHHHHhcc
Confidence            999999999988764

The TOM (translocase of the outer mitochondrial membrane) complex consists of cytosol-exposed receptors and a pore-forming core, and mediates the transport of proteins from the cytosol across and into the outer mitochondrial membrane. A novel protein complex in the outer membrane of mitochondria, called the SAM complex (sorting and assembly machinery), is involved in the biogenesis of beta-barrel proteins of the outer membrane. Two translocases of the inner mitochondrial membrane (TIM22 and TIM23 complexes) mediate protein transport at the inner membrane. The TIM23 complex (a presequence translocase) mediates the transport of presequence-containing proteins across and into the inner membrane. Tim23 and Tim17 form part of this complex. Tim23 forms a pore in the inner membrane. The role of Tim17 is not yet fully understood. The TIM22 complex (a twin-pore carrier translocase) catalyses the insertion of multi-spanning proteins that have internal targeting signals into the inner membrane. The TIM22 complex mediates the membrane insertion of multi-spanning inner-membrane proteins that have internal targeting signals, and it uses the membrane potential as an external driving force. The Tim22 subunit of the mitochondrial import inner membrane translocase is included in this family. This family also includes Pmp24, a peroxisomal membrane protein, and NADH ubiquinone dehydrogenase 1 alpha subunit 11. Pmp24 was previously known as Pmp27 [].

>KOG3225|consensus

Probab=99.83  E-value=5.1e-21  Score=162.09  Aligned_cols=106  Identities=18%  Similarity=0.187  Sum_probs=93.0

Q ss_pred             hhhhhhHHHhhhhhhhHhHhhhHHHHHHHHHhhhhcccc--CCChhhhHHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhh
Q psy7109          44 SKQRGRFELAFSQIGGSCMLGAAIGGAEGFYKGLRNTTL--EGQTGKLRRTQLLNHIMKHGSATASTLGTIAVMYSSFGV  121 (236)
Q Consensus        44 ~k~Rg~~ee~~~~tG~syl~G~~lGg~~Gl~~G~~~~p~--~g~t~KlRln~iLN~~gkrG~~~GNsfGvigllYSg~ec  121 (236)
                      .+-...|+.+..++-.+.|+|.++|+++|+|.+..++..  +....++-+.++++.|++|+.+++++||++|++|++.||
T Consensus        33 ~r~le~~n~c~~Ka~~sgV~GfglG~~~GlFlas~d~~~~dP~i~~~~ar~q~~kdMg~r~~s~~knF~~iGlvfsg~Ec  112 (168)
T KOG3225|consen   33 MRYLEEENSCAVKAVKSGVTGFGLGGAFGLFLASLDTQPNDPTIYRMPARKQVAKDMGQRSGSYAKNFAIIGLVFSGVEC  112 (168)
T ss_pred             HHHHHHhcchhHHHHHhhccccchhhhHHhhhhhcccCCCCCchhhhhhHHHHHHHHHhhhcchhhhhhhhhhhehhHHH
Confidence            355566666677999999999999999999999988431  112345677788999999999999999999999999999


Q ss_pred             hhhhcccCCCchhHHHHHHhhhhhhhcc
Q psy7109         122 LLQTTRGTDDDFNTLTAATATGMLFRST  149 (236)
Q Consensus       122 ~ie~~RgK~D~~NSIaAGalTGaLyks~  149 (236)
                      +||.+|+|+||+|+++||++||+.+..+
T Consensus       113 ~iE~~RAK~D~~NgaiaG~vtGg~l~~r  140 (168)
T KOG3225|consen  113 LIESFRAKSDWYNGAIAGCVTGGSLGYR  140 (168)
T ss_pred             HHHHHHhhhchhcceeeeeeeccchhhc
Confidence            9999999999999999999999999999

>KOG1652|consensus

Probab=99.79  E-value=5.4e-21  Score=164.44  Aligned_cols=114  Identities=19%  Similarity=0.297  Sum_probs=106.6

Q ss_pred             hhhhhhHhHhhhHHHHHHHHHhhhhccccCCChhhhHHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhhhhhhcccCCCch
Q psy7109          54 FSQIGGSCMLGAAIGGAEGFYKGLRNTTLEGQTGKLRRTQLLNHIMKHGSATASTLGTIAVMYSSFGVLLQTTRGTDDDF  133 (236)
Q Consensus        54 ~~~tG~syl~G~~lGg~~Gl~~G~~~~p~~g~t~KlRln~iLN~~gkrG~~~GNsfGvigllYSg~ec~ie~~RgK~D~~  133 (236)
                      +.++|.+|.||.+.|.+|++++|++++| .+    +|+...++.+..+.+..|++||+|+.+||.+||++..+|+|||.|
T Consensus        14 v~d~g~afamg~igG~~f~~ikG~~nap-~G----~r~~gg~~av~~~ap~~ggsFAvwgglfSt~dC~Lv~~R~KeDpw   88 (183)
T KOG1652|consen   14 VDDCGGAFAMGTIGGSVFQLIKGFRNAP-SG----ARLVGGISAVKMRAPQSGGSFAVWGGLFSTVDCALVAIRKKEDPW   88 (183)
T ss_pred             eccccchhhhcccccceeeeeeeeecCC-cc----cccccchhhhhccCcccccceeeeechhhHHHHHHHHHhcccchH
Confidence            4589999999999999999999999998 44    389999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHhhhhhhhcccccccccccccccccccCCCcccccCccCCcchhhHHHHHHHHhhhhccCchhhhhhHhHHHHH
Q psy7109         134 NTLTAATATGMLFRSTGNCLVSSLSSFSLHFCDNKTSAVTVPSIRPLTCSQKLLENIVKERSKRCGLKKCGLGGVVGLGI  213 (236)
Q Consensus       134 NSIaAGalTGaLyks~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~  213 (236)
                      |+|+||++||++++.+                                                .|++++.-+.++|+++
T Consensus        89 NsivsGa~TGg~La~r------------------------------------------------~g~~a~~~sa~~~g~~  120 (183)
T KOG1652|consen   89 NSIVSGAATGGLLAAR------------------------------------------------GGPKAMLTSAITGGLL  120 (183)
T ss_pred             HHHHHHhhccceeecc------------------------------------------------ccHHHHHHHHHHHHHH
Confidence            9999999999999999                                                8999999999999988


Q ss_pred             HHHHHHH
Q psy7109         214 ASLYVLW  220 (236)
Q Consensus       214 ~~~~~~~  220 (236)
                      .+++.-.
T Consensus       121 lamieg~  127 (183)
T KOG1652|consen  121 LAMIEGL  127 (183)
T ss_pred             HHHHHhH
Confidence            8877643

>COG5596 TIM22 Mitochondrial import inner membrane translocase, subunit TIM22 [Posttranslational modification, protein turnover, chaperones]

Probab=99.79  E-value=7.6e-21  Score=164.32  Aligned_cols=128  Identities=24%  Similarity=0.301  Sum_probs=119.9

Q ss_pred             hhhhhHHHhhhhhhhHhHhhhHHHHHHHHHhhhhccccCCChhhhHHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhhhhh
Q psy7109          45 KQRGRFELAFSQIGGSCMLGAAIGGAEGFYKGLRNTTLEGQTGKLRRTQLLNHIMKHGSATASTLGTIAVMYSSFGVLLQ  124 (236)
Q Consensus        45 k~Rg~~ee~~~~tG~syl~G~~lGg~~Gl~~G~~~~p~~g~t~KlRln~iLN~~gkrG~~~GNsfGvigllYSg~ec~ie  124 (236)
                      ..++|...+++.++..++.|..+|++||   |+.++. ...++++|++..+|.++++|++.||+||++|+.|+++||+|+
T Consensus        63 ~~g~f~ssl~y~t~~~~~~g~nfg~vwG---gl~~~i-~~~~~r~q~~~~~~n~~~rg~ftG~n~GvlGl~y~~~ns~I~  138 (191)
T COG5596          63 PSGGFSSSLAYGTGLVHLLGLNFGGVWG---GLFSTI-DCTPFRLQLKEQLNNAGKRGFFTGKNLGVLGLIYAGINSIIT  138 (191)
T ss_pred             ccccchhhcccccccccccCcccccccc---ceeecc-ccchHHHHHhhccccccccccccccccceeeeecccchhhhh
Confidence            4577888899999999999999999999   888665 456889999999999999999999999999999999999999


Q ss_pred             hcccCCCchhHHHHHHhhhhhhhcccccccccccccccccccCCCcccccCccCCcchhhHHHHHHHHhhhhccCchhhh
Q psy7109         125 TTRGTDDDFNTLTAATATGMLFRSTGNCLVSSLSSFSLHFCDNKTSAVTVPSIRPLTCSQKLLENIVKERSKRCGLKKCG  204 (236)
Q Consensus       125 ~~RgK~D~~NSIaAGalTGaLyks~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  204 (236)
                      .+|+|||+.|+|.||+.||++|+++                                                .|++++.
T Consensus       139 ~~r~k~d~~~~iaaG~~TGa~~~~~------------------------------------------------~g~qa~~  170 (191)
T COG5596         139 ALRAKHDIANAIAAGAFTGAALASS------------------------------------------------AGPQAMP  170 (191)
T ss_pred             hhhhccccchhhhhhhhhhHHHHhh------------------------------------------------ccccccc
Confidence            9999999999999999999999999                                                8999999


Q ss_pred             hhHhHHHHHHHHHHHHhcCC
Q psy7109         205 LGGVVGLGIASLYVLWNKRD  224 (236)
Q Consensus       205 ~~~~~g~~~~~~~~~~~~~~  224 (236)
                      ++++.=...++.|.++.+|.
T Consensus       171 ~~~a~~aa~s~~~~~~~~~~  190 (191)
T COG5596         171 MGGAGFAAFSAGITLAMKSE  190 (191)
T ss_pred             cCccchhhhhhhHHhhhhcc
Confidence            99999999999999988774

>KOG4608|consensus

Probab=98.34  E-value=9.9e-08  Score=86.33  Aligned_cols=101  Identities=18%  Similarity=0.142  Sum_probs=78.2

Q ss_pred             hHHHhhh--hhhhHhHhhhHHHHHHHHHhhhhcccc--C-------CChhhhHHHHHHHHHhhhhhhhhhHHHHHHHHHh
Q psy7109          49 RFELAFS--QIGGSCMLGAAIGGAEGFYKGLRNTTL--E-------GQTGKLRRTQLLNHIMKHGSATASTLGTIAVMYS  117 (236)
Q Consensus        49 ~~ee~~~--~tG~syl~G~~lGg~~Gl~~G~~~~p~--~-------g~t~KlRln~iLN~~gkrG~~~GNsfGvigllYS  117 (236)
                      .||.+-.  -.-+++++|.+.||+-+....-.....  +       -+-.|....+.+....|.|..||-..|.+...|-
T Consensus        67 s~e~a~v~~v~a~~flgG~~~ggat~s~~A~~~y~~nsqa~ky~sh~davk~~~d~air~farGgf~~G~R~alfttSff  146 (270)
T KOG4608|consen   67 SKELANVCKVAATAFLGGWVYGGATASIHAKQQYIENSQAEKYHSHFDAVKSAHDAAIRGFARGGFRWGWRTALFTTSFF  146 (270)
T ss_pred             chhhHHHHHHHHHhhhhheeeccchHhHHHHHHHHhccHHHHhhChHHHHHHHHHHHHHHHhhccccceeEEeeehhhHH
Confidence            4444322  556778888888888777655332110  1       1223445566777788999999999999999999


Q ss_pred             hhhhhhhhcccCCCchhHHHHHHhhhhhhhcc
Q psy7109         118 SFGVLLQTTRGTDDDFNTLTAATATGMLFRST  149 (236)
Q Consensus       118 g~ec~ie~~RgK~D~~NSIaAGalTGaLyks~  149 (236)
                      ++...+..||+|+|.+|-++||++||++|+-.
T Consensus       147 ~l~t~l~vyRgk~a~~~fvaaga~tgsvF~~~  178 (270)
T KOG4608|consen  147 TLNTSLNVYRGKDALSHFVAAGAVTGSVFRIN  178 (270)
T ss_pred             HHHHHHHHHcCchhhhhhhccccceeeeEEee
Confidence            99999999999999999999999999999999

>COG5596 TIM22 Mitochondrial import inner membrane translocase, subunit TIM22 [Posttranslational modification, protein turnover, chaperones]

Probab=94.02  E-value=0.0064  Score=53.56  Aligned_cols=89  Identities=11%  Similarity=-0.081  Sum_probs=59.4

Q ss_pred             hhhhHhHhhhHHHHHHHHHhhhhccccCCChhhhHHHHHHHHHhhhhhhhhhHHH-HHHHHHhhhhhhhhhcccCCCchh
Q psy7109          56 QIGGSCMLGAAIGGAEGFYKGLRNTTLEGQTGKLRRTQLLNHIMKHGSATASTLG-TIAVMYSSFGVLLQTTRGTDDDFN  134 (236)
Q Consensus        56 ~tG~syl~G~~lGg~~Gl~~G~~~~p~~g~t~KlRln~iLN~~gkrG~~~GNsfG-vigllYSg~ec~ie~~RgK~D~~N  134 (236)
                      +.+.++-++.+.+.++.-++|.+..+. ..    +...-+...+.+.+-.|.+|| +||.+++.++|....+|-++|.+|
T Consensus        37 ~~~~~~~~~~i~k~~~s~l~G~~~g~~-~g----~f~ssl~y~t~~~~~~g~nfg~vwGgl~~~i~~~~~r~q~~~~~~n  111 (191)
T COG5596          37 DFMKAFSYSCIGKSALSGLKGFRLGGP-SG----GFSSSLAYGTGLVHLLGLNFGGVWGGLFSTIDCTPFRLQLKEQLNN  111 (191)
T ss_pred             hhccchhhcchhhhhhhcccccccccc-cc----cchhhcccccccccccCccccccccceeeccccchHHHHHhhcccc
Confidence            344444444555555555555554331 11    122233333445556677777 999999999999999999999999


Q ss_pred             HHHHHHhhhhhhhcc
Q psy7109         135 TLTAATATGMLFRST  149 (236)
Q Consensus       135 SIaAGalTGaLyks~  149 (236)
                      ....|..||..+.-.
T Consensus       112 ~~~rg~ftG~n~Gvl  126 (191)
T COG5596         112 AGKRGFFTGKNLGVL  126 (191)
T ss_pred             cccccccccccccee
Confidence            999999999776655

>PF10247 Romo1: Reactive mitochondrial oxygen species modulator 1; InterPro: IPR018450 The majority of endogenous reactive oxygen species (ROS) in cells are produced by the mitochondrial respiratory chain

Probab=93.82  E-value=0.068  Score=40.06  Aligned_cols=59  Identities=25%  Similarity=0.307  Sum_probs=43.8

Q ss_pred             hhhhhhhHhHhhhHHHHHHHHHhhhhccccCCChhhhHHHHHHHHHhhhhhhhhhHHHHHHHH
Q psy7109          53 AFSQIGGSCMLGAAIGGAEGFYKGLRNTTLEGQTGKLRRTQLLNHIMKHGSATASTLGTIAVM  115 (236)
Q Consensus        53 ~~~~tG~syl~G~~lGg~~Gl~~G~~~~p~~g~t~KlRln~iLN~~gkrG~~~GNsfGvigll  115 (236)
                      ++.++-+++++|+.+|++.|++-|..+.-    ..+.|-+.+++.+++.....|-+||.+-.+
T Consensus         3 c~~kikmG~~MG~~VG~~~G~l~G~~~~~----r~g~~~~~~~~~lg~~~l~sg~tFG~Fm~i   61 (67)
T PF10247_consen    3 CFDKIKMGFMMGGAVGGAFGALFGTFSAF----RYGARGRGLMRTLGKYMLGSGATFGFFMSI   61 (67)
T ss_pred             HHHHHHHHHHHhhHHHhhhhhhhhhHHHh----ccCCCCcchHhHHhHHHhcchhHHHHHHhh
Confidence            45578889999998888888888776642    223455678888999999888888865443

An increase or imbalance in ROS alters the intracellular redox homeostasis, triggers DNA damage, and may contribute to cancer development and progression. This entry contains the mitochondrial protein, reactive oxygen species modulator 1 (Romo1), that is responsible for increasing the level of ROS in cells. In various cancer cell lines with elevated levels of ROS there is also an increased abundance of Romo1 []. Increased Romo1 expression can have a number of other affects including: inducing premature senescence of cultured human fibroblasts [, ] and increased resistance to 5-fluorouracil [].

>KOG4096|consensus

Probab=92.32  E-value=0.16  Score=38.86  Aligned_cols=66  Identities=27%  Similarity=0.245  Sum_probs=46.3

Q ss_pred             hhhhhhhHhHhhhHHHHHHHHHhhhhccccCCChhhhHHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhhh
Q psy7109          53 AFSQIGGSCMLGAAIGGAEGFYKGLRNTTLEGQTGKLRRTQLLNHIMKHGSATASTLGTIAVMYSSFGVL  122 (236)
Q Consensus        53 ~~~~tG~syl~G~~lGg~~Gl~~G~~~~p~~g~t~KlRln~iLN~~gkrG~~~GNsfGvigllYSg~ec~  122 (236)
                      ++.++=+++++|..+|+..|++.|-...-    ..++|=...++.++|...+.|.+||.+-.+=+++.|.
T Consensus         7 c~dKikmG~~mG~avG~a~G~lfGgf~~l----R~g~~g~~~vr~iGkt~~~SagtFG~FM~igs~Ir~~   72 (75)
T KOG4096|consen    7 CFDKIKMGLMMGGAVGGATGALFGGFAAL----RYGPRGRGLVRTIGKTMLQSAGTFGLFMGIGSGIRCG   72 (75)
T ss_pred             HHHHHHHHHHHHhhhhhhhhhhccchhhe----eecCChhHHHHHHhHHHHhccchhhhhhhhhhheecC
Confidence            34477777888877777777766654432    1233556788999999999999999776666666654

>PF12732 YtxH: YtxH-like protein; InterPro: IPR024623 This family of uncharacterised proteins is found in bacteria

Probab=89.79  E-value=0.96  Score=33.33  Aligned_cols=44  Identities=18%  Similarity=0.249  Sum_probs=31.2

Q ss_pred             hHhhhHHHHHHHHHhhhhccccCCChhhhHHHHHHHHHhhhhhh
Q psy7109          61 CMLGAAIGGAEGFYKGLRNTTLEGQTGKLRRTQLLNHIMKHGSA  104 (236)
Q Consensus        61 yl~G~~lGg~~Gl~~G~~~~p~~g~t~KlRln~iLN~~gkrG~~  104 (236)
                      |+.|+++|++.|..-|+.-+|..|...|.++....+.+......
T Consensus         1 F~~g~l~Ga~~Ga~~glL~aP~sG~e~R~~l~~~~~~~~~~~~~   44 (74)
T PF12732_consen    1 FLLGFLAGAAAGAAAGLLFAPKSGKETREKLKDKAEDLKDKAKD   44 (74)
T ss_pred             CHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence            56788888888888888878866666666777766666555443

Proteins in this family are typically between 100 and 143 amino acids in length. The N-terminal region is the most conserved.

>TIGR00983 3a0801s02tim23 mitochondrial import inner membrane translocase subunit tim23

Probab=88.88  E-value=1.1  Score=37.98  Aligned_cols=79  Identities=19%  Similarity=0.140  Sum_probs=45.2

Q ss_pred             CCCCCCCccccccchhhhh---hhHHHhhh-hhhhHhHhhhHHHHHHHHHhhhhccccCCChhhhHHHHHHHHHhhhhhh
Q psy7109          29 LPKTSQPEFIFPEGASKQR---GRFELAFS-QIGGSCMLGAAIGGAEGFYKGLRNTTLEGQTGKLRRTQLLNHIMKHGSA  104 (236)
Q Consensus        29 Lpt~~~PEfIfpEea~k~R---g~~ee~~~-~tG~syl~G~~lGg~~Gl~~G~~~~p~~g~t~KlRln~iLN~~gkrG~~  104 (236)
                      ||+  +|||||+||...--   ..=.+-.. +.=....+..++|.+.|...|+++.- ...+.....+.-+|.+-+...+
T Consensus         4 l~~--~~~~l~~~~~~~~~~~g~~~~R~~~e~~~~~~G~ay~~G~~~Gg~~Gl~~G~-~~~~~~~~~k~rln~~ln~~~~   80 (149)
T TIGR00983         4 LDK--DPEYLVQEEDELSLLTGANPSRGWFEDLCFGTGTCYLTGLAIGALNGLRLGL-KETQSMPWTKLRLNQILNMVTR   80 (149)
T ss_pred             CCC--CcHHHcCcchhhcCCCCCCCCCChhhhhhhhHhHHHHHHHHHHHHHHHHHHH-hhCCCCCcHHHHHHHHHHHHHh
Confidence            677  59999999862100   00112222 44445566678899999999998754 2222222334556666666555


Q ss_pred             hhhHHH
Q psy7109         105 TASTLG  110 (236)
Q Consensus       105 ~GNsfG  110 (236)
                      -|-++|
T Consensus        81 ~g~~~G   86 (149)
T TIGR00983        81 RGPFWG   86 (149)
T ss_pred             HhHHHH
Confidence            555444

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00