Psyllid ID: psy7201

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60-----
Protein Sequence
STDFENKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYELEFPGEKLSKGPFINL
Secondary Structure (PSIPRED)
cccccccccccccEEEccEEcccccEEEEEEEcccccccEEEEEEEEEEEEcccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccHHEEEccccEcccccEEEEEEccccccccccEEEEEEEEcccccccccccccccc
Coil and Loop (DISEMBL)
STDFENKAAWKECFKvsgvklptgyyfgvsaatgdlsdnhdvlgirtyelefpgeklskgpfinl
Flexible Loop (DISEMBL)
stdfenkaaWKECFKVSGVKLPTGYYFGVSaatgdlsdnHDVLGIRTYelefpgeklskgpfinl
Low Complexity Region (SEG)
STDFENKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYELEFPGEKLSKGPFINL
Disordered region (IsUnstruct)
*******AAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYELEF*************
Disordered Region (DISOPRED)
**DFENKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTY**************I**
Disordered Region (DISEMBL)
********AWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYELEFPGEKLSKGPFINL
Disordered Region (DISPRO)
*****NKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYELEFP************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
STDFENKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYELEFPGEKLSKGPFINL
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	65	2.2.26 [Sep-21-2011]
Q9DBH5	358	Vesicular integral-membra	yes	N/A	0.753	0.136	0.612	1e-13
P49256	356	Vesicular integral-membra	yes	N/A	0.753	0.137	0.591	1e-13
Q12907	356	Vesicular integral-membra	yes	N/A	0.753	0.137	0.591	2e-13
Q2HJD1	348	VIP36-like protein OS=Bos	no	N/A	0.738	0.137	0.562	3e-12
Q5RCF0	348	VIP36-like protein OS=Pon	no	N/A	0.738	0.137	0.562	3e-12
Q9H0V9	348	VIP36-like protein OS=Hom	no	N/A	0.738	0.137	0.562	4e-12
P59481	347	VIP36-like protein OS=Mus	no	N/A	0.738	0.138	0.541	1e-11
Q62902	517	Protein ERGIC-53 OS=Rattu	no	N/A	0.784	0.098	0.450	1e-06
Q9D0F3	517	Protein ERGIC-53 OS=Mus m	no	N/A	0.784	0.098	0.450	1e-06
Q9TU32	510	Protein ERGIC-53 OS=Chlor	N/A	N/A	0.784	0.1	0.450	3e-06

>sp|Q9DBH5|LMAN2_MOUSE Vesicular integral-membrane protein VIP36 OS=Mus musculus GN=Lman2 PE=2 SV=2

 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 30/49 (61%), Positives = 39/49 (79%)

Query: 2   TDFENKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYEL 50
           TD E+K  WK C  ++GV+LPTGYYFG SA TGDLSDNHD++ I+ ++L
Sbjct: 230 TDLEDKNEWKNCIDITGVRLPTGYYFGASAGTGDLSDNHDIISIKLFQL 278

Plays a role as an intracellular lectin in the early secretory pathway. Interacts with N-acetyl-D-galactosamine and high-mannose type glycans and may also bind to O-linked glycans. Involved in the transport and sorting of glycoproteins carrying high mannose-type glycans.
Mus musculus (taxid: 10090)

>sp|P49256|LMAN2_CANFA Vesicular integral-membrane protein VIP36 OS=Canis familiaris GN=LMAN2 PE=1 SV=1

 Score = 75.1 bits (183), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/49 (59%), Positives = 39/49 (79%)

Query: 2   TDFENKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYEL 50
           TD E+K  WK C  ++GV+LPTGYYFG SA TGDLSDNHD++ ++ ++L
Sbjct: 228 TDLEDKNEWKNCIDITGVRLPTGYYFGASAGTGDLSDNHDIISMKLFQL 276

Plays a role as an intracellular lectin in the early secretory pathway. Interacts with N-acetyl-D-galactosamine and high-mannose type glycans and may also bind to O-linked glycans. Involved in the transport and sorting of glycoproteins carrying high mannose-type glycans.

Canis familiaris (taxid: 9615)

>sp|Q12907|LMAN2_HUMAN Vesicular integral-membrane protein VIP36 OS=Homo sapiens GN=LMAN2 PE=1 SV=1

 Score = 74.7 bits (182), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/49 (59%), Positives = 39/49 (79%)

Query: 2   TDFENKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYEL 50
           TD E+K  WK C  ++GV+LPTGYYFG SA TGDLSDNHD++ ++ ++L
Sbjct: 228 TDLEDKNEWKNCIDITGVRLPTGYYFGASAGTGDLSDNHDIISMKLFQL 276

Plays a role as an intracellular lectin in the early secretory pathway. Interacts with N-acetyl-D-galactosamine and high-mannose type glycans and may also bind to O-linked glycans. Involved in the transport and sorting of glycoproteins carrying high mannose-type glycans.

Homo sapiens (taxid: 9606)

>sp|Q2HJD1|LMA2L_BOVIN VIP36-like protein OS=Bos taurus GN=LMAN2L PE=2 SV=1

 Score = 70.5 bits (171), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 27/48 (56%), Positives = 37/48 (77%)

Query: 3   DFENKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYEL 50
           D + K  W++C +V GV+LP GYYFG S+ TGDLSDNHDV+ ++ +EL
Sbjct: 227 DIDGKHEWRDCIEVPGVRLPRGYYFGTSSITGDLSDNHDVISLKLFEL 274

May be involved in the regulation of export from the endoplasmic reticulum of a subset of glycoproteins. May function as a regulator of ERGIC-53.

Bos taurus (taxid: 9913)

>sp|Q5RCF0|LMA2L_PONAB VIP36-like protein OS=Pongo abelii GN=LMAN2L PE=3 SV=1

 Score = 70.5 bits (171), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 27/48 (56%), Positives = 37/48 (77%)

Query: 3   DFENKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYEL 50
           D + K  W++C +V GV+LP GYYFG S+ TGDLSDNHDV+ ++ +EL
Sbjct: 227 DIDGKHEWRDCIEVPGVRLPRGYYFGTSSITGDLSDNHDVISLKLFEL 274

May be involved in the regulation of export from the endoplasmic reticulum of a subset of glycoproteins. May function as a regulator of ERGIC-53.

Pongo abelii (taxid: 9601)

>sp|Q9H0V9|LMA2L_HUMAN VIP36-like protein OS=Homo sapiens GN=LMAN2L PE=1 SV=1

 Score = 70.1 bits (170), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 27/48 (56%), Positives = 37/48 (77%)

Query: 3   DFENKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYEL 50
           D + K  W++C +V GV+LP GYYFG S+ TGDLSDNHDV+ ++ +EL
Sbjct: 227 DIDGKHEWRDCIEVPGVRLPRGYYFGTSSITGDLSDNHDVISLKLFEL 274

May be involved in the regulation of export from the endoplasmic reticulum of a subset of glycoproteins. May function as a regulator of ERGIC-53.

Homo sapiens (taxid: 9606)

>sp|P59481|LMA2L_MOUSE VIP36-like protein OS=Mus musculus GN=Lman2l PE=2 SV=1

 Score = 68.6 bits (166), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/48 (54%), Positives = 37/48 (77%)

Query: 3   DFENKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYEL 50
           D + K  W++C ++ GV+LP GYYFG S+ TGDLSDNHDV+ ++ +EL
Sbjct: 226 DIDGKHEWRDCIEMPGVRLPRGYYFGTSSITGDLSDNHDVISLKLFEL 273

May be involved in the regulation of export from the endoplasmic reticulum of a subset of glycoproteins. May function as a regulator of ERGIC-53.

Mus musculus (taxid: 10090)

>sp|Q62902|LMAN1_RAT Protein ERGIC-53 OS=Rattus norvegicus GN=Lman1 PE=1 SV=1

 Score = 51.6 bits (122), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/51 (45%), Positives = 36/51 (70%)

Query: 6   NKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYELEFPGEK 56
           +K  ++ C KV  + +PT  +FG+SAATG L+D+HDVL   T++L  PG++
Sbjct: 231 DKNDYEFCAKVENMVIPTQGHFGISAATGGLADDHDVLSFLTFQLTEPGKE 281

Mannose-specific lectin. May recognize sugar residues of glycoproteins, glycolipids, or glycosylphosphatidyl inositol anchors and may be involved in the sorting or recycling of proteins, lipids, or both. The LMAN1-MCFD2 complex forms a specific cargo receptor for the ER-to-Golgi transport of selected proteins.

Rattus norvegicus (taxid: 10116)

>sp|Q9D0F3|LMAN1_MOUSE Protein ERGIC-53 OS=Mus musculus GN=Lman1 PE=2 SV=1

 Score = 51.6 bits (122), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/51 (45%), Positives = 36/51 (70%)

Query: 6   NKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYELEFPGEK 56
           +K  ++ C KV  + +PT  +FG+SAATG L+D+HDVL   T++L  PG++
Sbjct: 231 DKNDYEFCAKVENMVIPTQGHFGISAATGGLADDHDVLSFLTFQLTEPGKE 281

Mannose-specific lectin. May recognize sugar residues of glycoproteins, glycolipids, or glycosylphosphatidyl inositol anchors and may be involved in the sorting or recycling of proteins, lipids, or both. The LMAN1-MCFD2 complex forms a specific cargo receptor for the ER-to-Golgi transport of selected proteins.

Mus musculus (taxid: 10090)

>sp|Q9TU32|LMAN1_CHLAE Protein ERGIC-53 OS=Chlorocebus aethiops GN=LMAN1 PE=2 SV=1

 Score = 50.4 bits (119), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/51 (45%), Positives = 35/51 (68%)

Query: 6   NKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYELEFPGEK 56
           +K  ++ C KV  + +P   +FGVSAATG L+D+HDVL   T++L  PG++
Sbjct: 223 DKNDYEFCAKVENMIIPAQGHFGVSAATGGLADDHDVLSFLTFQLTEPGKE 273

Mannose-specific lectin. May recognize sugar residues of glycoproteins, glycolipids, or glycosylphosphatidyl inositol anchors and may be involved in the sorting or recycling of proteins, lipids, or both. The LMAN1-MCFD2 complex forms a specific cargo receptor for the ER-to-Golgi transport of selected proteins.

Chlorocebus aethiops (taxid: 9534)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	65
383866233	324	PREDICTED: vesicular integral-membrane p	0.846	0.169	0.745	6e-19
340725431	323	PREDICTED: VIP36-like protein-like [Bomb	0.815	0.164	0.754	8e-19
350403942	323	PREDICTED: vesicular integral-membrane p	0.846	0.170	0.727	1e-18
66525147	324	PREDICTED: vesicular integral-membrane p	0.846	0.169	0.727	2e-18
380016416	324	PREDICTED: vesicular integral-membrane p	0.846	0.169	0.709	4e-18
91090624	324	PREDICTED: similar to vesicular mannose-	0.846	0.169	0.709	7e-18
157126608	338	vesicular mannose-binding lectin [Aedes	0.830	0.159	0.759	1e-17
242018971	329	Vesicular integral-membrane protein VIP3	0.815	0.161	0.735	2e-17
322801014	332	hypothetical protein SINV_09590 [Solenop	0.846	0.165	0.690	2e-17
347971840	335	AGAP004407-PA [Anopheles gambiae str. PE	0.8	0.155	0.75	4e-17

>gi|383866233|ref|XP_003708575.1| PREDICTED: vesicular integral-membrane protein VIP36-like [Megachile rotundata]

 Score = 98.2 bits (243), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 41/55 (74%), Positives = 46/55 (83%)

Query: 1   STDFENKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYELEFPGE 55
           STDF NKAAWKECF V  +KLPTGYYFGVSA TGDLSDNHD+L IR +EL+ P +
Sbjct: 199 STDFANKAAWKECFSVKDIKLPTGYYFGVSATTGDLSDNHDILSIRLFELDLPDD 253

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340725431|ref|XP_003401073.1| PREDICTED: VIP36-like protein-like [Bombus terrestris]

 Score = 97.8 bits (242), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 40/53 (75%), Positives = 46/53 (86%)

Query: 1   STDFENKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYELEFP 53
           STDF NKAAWKECF V+ +KLPTGYYFG+SA TGDLSDNHD+L IR +EL+ P
Sbjct: 198 STDFSNKAAWKECFSVNDIKLPTGYYFGISATTGDLSDNHDILSIRLFELDLP 250

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350403942|ref|XP_003486958.1| PREDICTED: vesicular integral-membrane protein VIP36-like [Bombus impatiens]

 Score = 96.7 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/55 (72%), Positives = 46/55 (83%)

Query: 1   STDFENKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYELEFPGE 55
           STDF NKAAWKECF V  +KLPTGYYFG+SA TGDLSDNHD+L IR +EL+ P +
Sbjct: 198 STDFSNKAAWKECFSVKDIKLPTGYYFGISATTGDLSDNHDILSIRLFELDLPDD 252

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|66525147|ref|XP_625194.1| PREDICTED: vesicular integral-membrane protein VIP36 [Apis mellifera]

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/55 (72%), Positives = 46/55 (83%)

Query: 1   STDFENKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYELEFPGE 55
           STDF NKAAWKECF V  +KLPTGYYFG+SA TGDLSDNHD+L IR +EL+ P +
Sbjct: 199 STDFANKAAWKECFSVKDIKLPTGYYFGISATTGDLSDNHDILSIRLFELDLPDD 253

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380016416|ref|XP_003692181.1| PREDICTED: vesicular integral-membrane protein VIP36-like [Apis florea]

 Score = 95.5 bits (236), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 39/55 (70%), Positives = 46/55 (83%)

Query: 1   STDFENKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYELEFPGE 55
           STDF NKAAWKECF V  +KLPTGYYFG+SA TGDLSDNHD+L +R +EL+ P +
Sbjct: 199 STDFANKAAWKECFSVKDIKLPTGYYFGISATTGDLSDNHDILSVRLFELDLPDD 253

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91090624|ref|XP_973445.1| PREDICTED: similar to vesicular mannose-binding lectin [Tribolium castaneum] gi|270013907|gb|EFA10355.1| hypothetical protein TcasGA2_TC012578 [Tribolium castaneum]

 Score = 94.4 bits (233), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 39/55 (70%), Positives = 47/55 (85%)

Query: 1   STDFENKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYELEFPGE 55
           STD ENKAAWKECF+V GV+LPTGYY GVSA TGDLSDNHD++ +R +EL+ P +
Sbjct: 199 STDIENKAAWKECFQVKGVRLPTGYYLGVSATTGDLSDNHDIMSVRLFELDMPDD 253

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157126608|ref|XP_001654670.1| vesicular mannose-binding lectin [Aedes aegypti] gi|108873193|gb|EAT37418.1| AAEL010584-PA [Aedes aegypti]

 Score = 94.0 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/54 (75%), Positives = 46/54 (85%)

Query: 1   STDFENKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYELEFPG 54
           STD ENK  WK+CF+V+GVKLPTGYYFGVSA TGDLSDNHD+L I+ YELE P 
Sbjct: 215 STDLENKNTWKQCFQVTGVKLPTGYYFGVSATTGDLSDNHDLLAIKFYELEAPA 268

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242018971|ref|XP_002429942.1| Vesicular integral-membrane protein VIP36 precursor, putative [Pediculus humanus corporis] gi|212514988|gb|EEB17204.1| Vesicular integral-membrane protein VIP36 precursor, putative [Pediculus humanus corporis]

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/53 (73%), Positives = 46/53 (86%)

Query: 1   STDFENKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYELEFP 53
           STDFENKAAWK CF+  G+ LPTGYYFG+SAATGDLSDNHD+L +R +EL+ P
Sbjct: 204 STDFENKAAWKVCFQSKGIILPTGYYFGISAATGDLSDNHDLLSVRLFELDVP 256

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322801014|gb|EFZ21795.1| hypothetical protein SINV_09590 [Solenopsis invicta]

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/55 (69%), Positives = 46/55 (83%)

Query: 1   STDFENKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYELEFPGE 55
           STD  NKAAW++CF+V+ VKLPTGYY G+SA TGDLSDNHD+L IR YEL+ P +
Sbjct: 206 STDLANKAAWRQCFQVNEVKLPTGYYIGISATTGDLSDNHDILSIRLYELDLPDD 260

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347971840|ref|XP_313693.4| AGAP004407-PA [Anopheles gambiae str. PEST] gi|333469053|gb|EAA09126.4| AGAP004407-PA [Anopheles gambiae str. PEST]

 Score = 92.0 bits (227), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 39/52 (75%), Positives = 44/52 (84%)

Query: 2   TDFENKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYELEFP 53
           TD ENKA WKECF+V GVKLPTGYYFG SA TGDLSDNHD++ I+ +ELE P
Sbjct: 214 TDLENKATWKECFRVEGVKLPTGYYFGASATTGDLSDNHDIISIKFFELEAP 265

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	65
UNIPROTKB|D6RDX1	288	LMAN2 "Vesicular integral-memb	0.753	0.170	0.591	4.7e-14
MGI|MGI:1914140	358	Lman2 "lectin, mannose-binding	0.753	0.136	0.612	5.9e-14
RGD|1308965	358	Lman2 "lectin, mannose-binding	0.753	0.136	0.632	7.6e-14
UNIPROTKB|D6RBV2	325	LMAN2 "Vesicular integral-memb	0.753	0.150	0.591	8.9e-14
FB|FBgn0039160	329	CG5510 [Drosophila melanogaste	0.784	0.155	0.607	9.4e-14
UNIPROTKB|P49256	356	LMAN2 "Vesicular integral-memb	0.753	0.137	0.591	1.2e-13
UNIPROTKB|Q12907	356	LMAN2 "Vesicular integral-memb	0.753	0.137	0.591	1.2e-13
UNIPROTKB|A6QP36	359	LMAN2 "LMAN2 protein" [Bos tau	0.753	0.136	0.591	1.3e-13
UNIPROTKB|F1S3D5	359	LMAN2 "Uncharacterized protein	0.753	0.136	0.591	1.3e-13
UNIPROTKB|J9P396	384	LMAN2 "Vesicular integral-memb	0.753	0.127	0.591	1.6e-13

UNIPROTKB|D6RDX1 LMAN2 "Vesicular integral-membrane protein VIP36" [Homo sapiens (taxid:9606)]

 Score = 182 (69.1 bits), Expect = 4.7e-14, P = 4.7e-14
 Identities = 29/49 (59%), Positives = 39/49 (79%)

Query:     2 TDFENKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYEL 50
             TD E+K  WK C  ++GV+LPTGYYFG SA TGDLSDNHD++ ++ ++L
Sbjct:   221 TDLEDKNEWKNCIDITGVRLPTGYYFGASAGTGDLSDNHDIISMKLFQL 269

GO:0016020 "membrane" evidence=IEA

MGI|MGI:1914140 Lman2 "lectin, mannose-binding 2" [Mus musculus (taxid:10090)]

 Score = 185 (70.2 bits), Expect = 5.9e-14, P = 5.9e-14
 Identities = 30/49 (61%), Positives = 39/49 (79%)

Query:     2 TDFENKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYEL 50
             TD E+K  WK C  ++GV+LPTGYYFG SA TGDLSDNHD++ I+ ++L
Sbjct:   230 TDLEDKNEWKNCIDITGVRLPTGYYFGASAGTGDLSDNHDIISIKLFQL 278

GO:0003674 "molecular_function" evidence=ND

GO:0005793 "endoplasmic reticulum-Golgi intermediate compartment" evidence=ISO

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0015031 "protein transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

RGD|1308965 Lman2 "lectin, mannose-binding 2" [Rattus norvegicus (taxid:10116)]

 Score = 184 (69.8 bits), Expect = 7.6e-14, P = 7.6e-14
 Identities = 31/49 (63%), Positives = 39/49 (79%)

Query:     2 TDFENKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYEL 50
             TD E+K  WK C  V+GV+LPTGYYFG SA TGDLSDNHD++ I+ ++L
Sbjct:   230 TDLEDKNEWKNCIDVTGVRLPTGYYFGASAGTGDLSDNHDLISIKLFQL 278

GO:0005793 "endoplasmic reticulum-Golgi intermediate compartment" evidence=IEA;ISO

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|D6RBV2 LMAN2 "Vesicular integral-membrane protein VIP36" [Homo sapiens (taxid:9606)]

 Score = 182 (69.1 bits), Expect = 8.9e-14, P = 8.9e-14
 Identities = 29/49 (59%), Positives = 39/49 (79%)

Query:     2 TDFENKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYEL 50
             TD E+K  WK C  ++GV+LPTGYYFG SA TGDLSDNHD++ ++ ++L
Sbjct:   228 TDLEDKNEWKNCIDITGVRLPTGYYFGASAGTGDLSDNHDIISMKLFQL 276

GO:0016020 "membrane" evidence=IEA

FB|FBgn0039160 CG5510 [Drosophila melanogaster (taxid:7227)]

 Score = 182 (69.1 bits), Expect = 9.4e-14, P = 9.4e-14
 Identities = 31/51 (60%), Positives = 40/51 (78%)

Query:     1 STDFENKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYELE 51
             STD EN+  WK CF V+ V+LPTGY+FG+SA TGDLSDNHD+   + Y+L+
Sbjct:   207 STDLENRNEWKNCFVVANVELPTGYHFGMSATTGDLSDNHDIHSFKFYDLD 257

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|P49256 LMAN2 "Vesicular integral-membrane protein VIP36" [Canis lupus familiaris (taxid:9615)]

 Score = 182 (69.1 bits), Expect = 1.2e-13, P = 1.2e-13
 Identities = 29/49 (59%), Positives = 39/49 (79%)

Query:     2 TDFENKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYEL 50
             TD E+K  WK C  ++GV+LPTGYYFG SA TGDLSDNHD++ ++ ++L
Sbjct:   228 TDLEDKNEWKNCIDITGVRLPTGYYFGASAGTGDLSDNHDIISMKLFQL 276

GO:0000139 "Golgi membrane" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

UNIPROTKB|Q12907 LMAN2 "Vesicular integral-membrane protein VIP36" [Homo sapiens (taxid:9606)]

 Score = 182 (69.1 bits), Expect = 1.2e-13, P = 1.2e-13
 Identities = 29/49 (59%), Positives = 39/49 (79%)

Query:     2 TDFENKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYEL 50
             TD E+K  WK C  ++GV+LPTGYYFG SA TGDLSDNHD++ ++ ++L
Sbjct:   228 TDLEDKNEWKNCIDITGVRLPTGYYFGASAGTGDLSDNHDIISMKLFQL 276

GO:0015031 "protein transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0033116 "endoplasmic reticulum-Golgi intermediate compartment membrane" evidence=IEA

GO:0005793 "endoplasmic reticulum-Golgi intermediate compartment" evidence=IDA

UNIPROTKB|A6QP36 LMAN2 "LMAN2 protein" [Bos taurus (taxid:9913)]

 Score = 182 (69.1 bits), Expect = 1.3e-13, P = 1.3e-13
 Identities = 29/49 (59%), Positives = 39/49 (79%)

Query:     2 TDFENKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYEL 50
             TD E+K  WK C  ++GV+LPTGYYFG SA TGDLSDNHD++ ++ ++L
Sbjct:   231 TDLEDKNEWKNCIDITGVRLPTGYYFGASAGTGDLSDNHDIISMKLFQL 279

GO:0005793 "endoplasmic reticulum-Golgi intermediate compartment" evidence=IEA

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|F1S3D5 LMAN2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 182 (69.1 bits), Expect = 1.3e-13, P = 1.3e-13
 Identities = 29/49 (59%), Positives = 39/49 (79%)

Query:     2 TDFENKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYEL 50
             TD E+K  WK C  ++GV+LPTGYYFG SA TGDLSDNHD++ ++ ++L
Sbjct:   231 TDLEDKNEWKNCIDITGVRLPTGYYFGASAGTGDLSDNHDIISMKLFQL 279

GO:0005793 "endoplasmic reticulum-Golgi intermediate compartment" evidence=IEA

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|J9P396 LMAN2 "Vesicular integral-membrane protein VIP36" [Canis lupus familiaris (taxid:9615)]

 Score = 182 (69.1 bits), Expect = 1.6e-13, P = 1.6e-13
 Identities = 29/49 (59%), Positives = 39/49 (79%)

Query:     2 TDFENKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYEL 50
             TD E+K  WK C  ++GV+LPTGYYFG SA TGDLSDNHD++ ++ ++L
Sbjct:   228 TDLEDKNEWKNCIDITGVRLPTGYYFGASAGTGDLSDNHDIISMKLFQL 276

GO:0016020 "membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P49256	LMAN2_CANFA	No assigned EC number	0.5918	0.7538	0.1376	yes	N/A
Q12907	LMAN2_HUMAN	No assigned EC number	0.5918	0.7538	0.1376	yes	N/A
Q9DBH5	LMAN2_MOUSE	No assigned EC number	0.6122	0.7538	0.1368	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	65
cd06901	248	cd06901, lectin_VIP36_VIPL, VIP36 and VIPL type 1	1e-24
pfam03388	226	pfam03388, Lectin_leg-like, Legume-like lectin fam	7e-18
cd07308	218	cd07308, lectin_leg-like, legume-like lectins: ERG	3e-15
cd06902	225	cd06902, lectin_ERGIC-53_ERGL, ERGIC-53 and ERGL t	9e-12
cd01951	223	cd01951, lectin_L-type, legume lectins	2e-04

>gnl|CDD|173889 cd06901, lectin_VIP36_VIPL, VIP36 and VIPL type 1 transmembrane proteins, lectin domain

 Score = 90.9 bits (226), Expect = 1e-24
 Identities = 34/53 (64%), Positives = 42/53 (79%)

Query: 1   STDFENKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYELEFP 53
            TD + K  WKECF V+GV+LPTGYYFG SAATGDLSDNHD++ ++ YEL+  
Sbjct: 174 MTDIDGKNEWKECFDVTGVRLPTGYYFGASAATGDLSDNHDIISMKLYELDVE 226

The vesicular integral protein of 36 kDa (VIP36) is a type 1 transmembrane protein of the mammalian early secretory pathway that acts as a cargo receptor transporting high mannose type glycoproteins between the Golgi and the endoplasmic reticulum (ER). Lectins of the early secretory pathway are involved in the selective transport of newly synthesized glycoproteins from the ER to the ER-Golgi intermediate compartment (ERGIC). The most prominent cycling lectin is the mannose-binding type1 membrane protein ERGIC-53, which functions as a cargo receptor to facilitate export of glycoproteins from the ER. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "back face". This domain homodimerizes so that adjacent back sheets form a contiguous 12-stranded sheet and homotetramers occur by a back-to-back association of these homodimers. Though L-type lectins exhibit both sequence and structural similarity to one another, their carbohydrate binding specificities differ widely. Length = 248

>gnl|CDD|217528 pfam03388, Lectin_leg-like, Legume-like lectin family

 Score = 72.8 bits (179), Expect = 7e-18
 Identities = 31/48 (64%), Positives = 37/48 (77%)

Query: 5   ENKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYELEF 52
           E+K  +K CF+V  V+LPTGYYFGVSAATGDLSDNHDV    T++L  
Sbjct: 179 EDKVDYKLCFQVENVRLPTGYYFGVSAATGDLSDNHDVFSFLTFQLFN 226

Lectins are structurally diverse proteins that bind to specific carbohydrates. This family includes the VIP36 and ERGIC-53 lectins. These two proteins were the first recognised members of a family of animal lectins similar (19-24%) to the leguminous plant lectins. The alignment for this family aligns residues lying towards the N-terminus, where the similarity of VIP36 and ERGIC-53 is greatest. However, while Fiedler and Simons identified these proteins as a new family of animal lectins, our alignment also includes yeast sequences. ERGIC-53 is a 53kD protein, localised to the intermediate region between the endoplasmic reticulum and the Golgi apparatus (ER-Golgi-Intermediate Compartment, ERGIC). It was identified as a calcium-dependent, mannose-specific lectin. Its dysfunction has been associated with combined factors V and VIII deficiency OMIM:227300 OMIM:601567, suggesting an important and substrate-specific role for ERGIC-53 in the glycoprotein- secreting pathway. Length = 226

>gnl|CDD|173892 cd07308, lectin_leg-like, legume-like lectins: ERGIC-53, ERGL, VIP36, VIPL, EMP46, and EMP47

 Score = 65.8 bits (161), Expect = 3e-15
 Identities = 28/48 (58%), Positives = 32/48 (66%)

Query: 3   DFENKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYEL 50
            +     WKECF V  V LP+  YFG SA TGDLSDNHD+L + TYEL
Sbjct: 171 TYSEGNNWKECFTVEDVILPSQGYFGFSAQTGDLSDNHDILSVHTYEL 218

The legume-like (leg-like) lectins are eukaryotic intracellular sugar transport proteins with a carbohydrate recognition domain similar to that of the legume lectins. This domain binds high-mannose-type oligosaccharides for transport from the endoplasmic reticulum to the Golgi complex. These leg-like lectins include ERGIC-53, ERGL, VIP36, VIPL, EMP46, EMP47, and the UIP5 (ULP1-interacting protein 5) precursor protein. Leg-like lectins have different intracellular distributions and dynamics in the endoplasmic reticulum-Golgi system of the secretory pathway and interact with N-glycans of glycoproteins in a calcium-dependent manner, suggesting a role in glycoprotein sorting and trafficking. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "back face". This domain homodimerizes so that adjacent back sheets form a contiguous 12-stranded sheet and homotetramers occur by a back-to-back association of these homodimers. Though L-type lectins exhibit both sequence and structural similarity to one another, their carbohydrate binding specificities differ widely. Length = 218

>gnl|CDD|173890 cd06902, lectin_ERGIC-53_ERGL, ERGIC-53 and ERGL type 1 transmembrane proteins, N-terminal lectin domain

 Score = 56.9 bits (138), Expect = 9e-12
 Identities = 23/45 (51%), Positives = 30/45 (66%)

Query: 6   NKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYEL 50
           NK  ++ C +V  + LP   YFGVSAATG L+D+HDVL   T+ L
Sbjct: 180 NKDDYELCTRVENMVLPPNGYFGVSAATGGLADDHDVLSFLTFSL 224

ERGIC-53 and ERGL, N-terminal carbohydrate recognition domain. ERGIC-53 and ERGL are eukaryotic mannose-binding type 1 transmembrane proteins of the early secretory pathway that transport newly synthesized glycoproteins from the endoplasmic reticulum (ER) to the ER-Golgi intermediate compartment (ERGIC). ERGIC-53 and ERGL have an N-terminal lectin-like carbohydrate recognition domain (represented by this alignment model) as well as a C-terminal transmembrane domain. ERGIC-53 functions as a 'cargo receptor' to facilitate the export of glycoproteins with different characteristics from the ER, while the ERGIC-53-like protein (ERGL) which may act as a regulator of ERGIC-53. In mammals, ERGIC-53 forms a complex with MCFD2 (multi-coagulation factor deficiency 2) which then recruits blood coagulation factors V and VIII. Mutations in either MCFD2 or ERGIC-53 cause a mild form of inherited hemophilia known as combined deficiency of factors V and VIII (F5F8D). In addition to the lectin and transmembrane domains, ERGIC-53 and ERGL have a short N-terminal cytoplasmic region of about 12 amino acids. ERGIC-53 forms disulphide-linked homodimers and homohexamers. ERGIC-53 and ERGL are sequence-similar to the lectins of leguminous plants. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "back face". This domain homodimerizes so that adjacent back sheets form a contiguous 12-stranded sheet and homotetramers occur by a back-to-back association of these homodimers. Though L-type lectins exhibit both sequence and structural similarity to one another, their carbohydrate binding specificities differ widely. Length = 225

>gnl|CDD|173886 cd01951, lectin_L-type, legume lectins

 Score = 37.0 bits (86), Expect = 2e-04
 Identities = 12/32 (37%), Positives = 17/32 (53%)

Query: 15  KVSGVKLPTGYYFGVSAATGDLSDNHDVLGIR 46
                  PT  YFG +A+TG L++ HD+L   
Sbjct: 189 VDLIQLGPTKAYFGFTASTGGLTNLHDILNWS 220

The L-type (legume-type) lectins are a highly diverse family of carbohydrate binding proteins that generally display no enzymatic activity toward the sugars they bind. This family includes arcelin, concanavalinA, the lectin-like receptor kinases, the ERGIC-53/VIP36/EMP46 type1 transmembrane proteins, and an alpha-amylase inhibitor. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "back face". This domain homodimerizes so that adjacent back sheets form a contiguous 12-stranded sheet and homotetramers occur by a back-to-back association of these homodimers. Though L-type lectins exhibit both sequence and structural similarity to one another, their carbohydrate binding specificities differ widely. Length = 223

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	65
cd06901	248	lectin_VIP36_VIPL VIP36 and VIPL type 1 transmembr	99.83
PF03388	229	Lectin_leg-like: Legume-like lectin family; InterP	99.76
cd06902	225	lectin_ERGIC-53_ERGL ERGIC-53 and ERGL type 1 tran	99.73
cd06903	215	lectin_EMP46_EMP47 EMP46 and EMP47 type 1 transmem	99.69
KOG3839|consensus	351		99.64
KOG3838|consensus	497		99.61
cd07308	218	lectin_leg-like legume-like lectins: ERGIC-53, ERG	99.56
cd01951	223	lectin_L-type legume lectins. The L-type (legume-t	98.01
cd06899	236	lectin_legume_LecRK_Arcelin_ConA legume lectins, l	97.64
PF00139	236	Lectin_legB: Legume lectin domain; InterPro: IPR00	96.8
cd06900	255	lectin_VcfQ VcfQ bacterial pilus biogenesis protei	92.69
PF09116	112	gp45-slide_C: gp45 sliding clamp, C terminal; Inte	86.01
PHA02545	223	45 sliding clamp; Provisional	82.92

>cd06901 lectin_VIP36_VIPL VIP36 and VIPL type 1 transmembrane proteins, lectin domain

Probab=99.83  E-value=6.3e-21  Score=134.95  Aligned_cols=57  Identities=60%  Similarity=1.120  Sum_probs=53.8

Q ss_pred             cccccccccccceeecceecCCCCeEEEeecCCCCCCCeeeEEEEEeeecCCCCcCC
Q psy7201           2 TDFENKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYELEFPGEKLS   58 (65)
Q Consensus         2 ~di~~~~~w~~Cf~~~~v~LP~~~yfGiSAaTG~lsDnhDIis~~~~~l~~~~~~~~   58 (65)
                      +|++++++|+.||++++|.||+++||||||+||+++|+|||++|++|++..+.++++
T Consensus       175 vd~~~~~~w~~Cf~~~~v~LP~~~yfGiSA~Tg~~sd~hdIlsv~~~~l~~~~~~~~  231 (248)
T cd06901         175 TDIDGKNEWKECFDVTGVRLPTGYYFGASAATGDLSDNHDIISMKLYELDVEETPEE  231 (248)
T ss_pred             EecCCCCceeeeEEeCCeecCCCCEEEEEecCCCCCCcEEEEEEEEecCcccccccc
Confidence            678899999999999999999999999999999999999999999999999988743

The vesicular integral protein of 36 kDa (VIP36) is a type 1 transmembrane protein of the mammalian early secretory pathway that acts as a cargo receptor transporting high mannose type glycoproteins between the Golgi and the endoplasmic reticulum (ER). Lectins of the early secretory pathway are involved in the selective transport of newly synthesized glycoproteins from the ER to the ER-Golgi intermediate compartment (ERGIC). The most prominent cycling lectin is the mannose-binding type1 membrane protein ERGIC-53, which functions as a cargo receptor to facilitate export of glycoproteins from the ER. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "back face". This domain homodimerizes so that adjacent back sheets form a contiguous 12-stranded she

>PF03388 Lectin_leg-like: Legume-like lectin family; InterPro: IPR005052 Lectins are structurally diverse proteins that bind to specific carbohydrates

Probab=99.76  E-value=3.6e-19  Score=123.60  Aligned_cols=48  Identities=60%  Similarity=1.217  Sum_probs=45.5

Q ss_pred             cccccccccceeecceecCCCCeEEEeecCCCCCCCeeeEEEEEeeec
Q psy7201           4 FENKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYELE   51 (65)
Q Consensus         4 i~~~~~w~~Cf~~~~v~LP~~~yfGiSAaTG~lsDnhDIis~~~~~l~   51 (65)
                      .++.++|+.||++++|.||.++||||||+||+++|||||+||++|+|.
T Consensus       182 ~~~~~~~~~Cf~~~~v~LP~~~yfGvSA~Tg~~~d~hdi~s~~~~~l~  229 (229)
T PF03388_consen  182 LKNQDDWELCFTTDGVDLPEGYYFGVSAATGELSDNHDILSVKTYSLD  229 (229)
T ss_dssp             CSECCTTEEEEEESTEEGGSSBEEEEEEEESSSGGEEEEEEEEEEEEE
T ss_pred             ccCCcCCcEEEEcCCeecCCCCEEEEEecCCCCCCcEEEEEEEEeecC
Confidence            567899999999999999999999999999999999999999999974

This family includes the VIP36 and ERGIC-53 lectins. These two proteins were the first members of the family of animal lectins similar to the leguminous plant lectins []. The alignment for this family is towards the N terminus, where the similarity of VIP36 and ERGIC-53 is greatest. Although they have been identified as a family of animal lectins, this alignment also includes yeast sequences[]. ERGIC-53 is a 53kDa protein, localised to the intermediate region between the endoplasmic reticulum and the Golgi apparatus (ER-Golgi-Intermediate Compartment, ERGIC). It was identified as a calcium-dependent, mannose-specific lectin []. Its dysfunction has been associated with combined factors V and VIII deficiency, suggesting an important and substrate-specific role for ERGIC-53 in the glycoprotein-secreting pathway [,]. The L-type lectin-like domain has an overall globular shape composed of a beta-sandwich of two major twisted antiparallel beta-sheets. The beta-sandwich comprises a major concave beta-sheet and a minor convex beta-sheet, in a variation of the jelly roll fold [, , , ]. ; GO: 0016020 membrane; PDB: 3A4U_A 3LCP_B 2A6Z_A 2A71_C 2A70_B 2A6Y_A 2A6X_A 2A6W_B 2A6V_B 2E6V_B ....

>cd06902 lectin_ERGIC-53_ERGL ERGIC-53 and ERGL type 1 transmembrane proteins, N-terminal lectin domain

Probab=99.73  E-value=2.8e-18  Score=119.85  Aligned_cols=45  Identities=51%  Similarity=0.851  Sum_probs=42.7

Q ss_pred             cccccccceeecceecCCCCeEEEeecCCCCCCCeeeEEEEEeee
Q psy7201           6 NKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYEL   50 (65)
Q Consensus         6 ~~~~w~~Cf~~~~v~LP~~~yfGiSAaTG~lsDnhDIis~~~~~l   50 (65)
                      +.++|+.||++++|.||.++||||||+||+++|+|||+||++|++
T Consensus       180 ~~~~~~~Cf~~~~v~LP~~~yfGiSA~Tg~l~d~hDIls~~~~sl  224 (225)
T cd06902         180 NKDDYELCTRVENMVLPPNGYFGVSAATGGLADDHDVLSFLTFSL  224 (225)
T ss_pred             CCCcccEEEecCCeeCCCCCEEEEEecCCCCCCcEeEEEEEEecc
Confidence            357899999999999999999999999999999999999999976

ERGIC-53 and ERGL, N-terminal carbohydrate recognition domain. ERGIC-53 and ERGL are eukaryotic mannose-binding type 1 transmembrane proteins of the early secretory pathway that transport newly synthesized glycoproteins from the endoplasmic reticulum (ER) to the ER-Golgi intermediate compartment (ERGIC). ERGIC-53 and ERGL have an N-terminal lectin-like carbohydrate recognition domain (represented by this alignment model) as well as a C-terminal transmembrane domain. ERGIC-53 functions as a 'cargo receptor' to facilitate the export of glycoproteins with different characteristics from the ER, while the ERGIC-53-like protein (ERGL) which may act as a regulator of ERGIC-53. In mammals, ERGIC-53 forms a complex with MCFD2 (multi-coagulation factor deficiency 2) which then recruits blood coagulation factors V and VIII. Mutations in either MCFD2 or ERGIC-53 cause a mild form of inherite

>cd06903 lectin_EMP46_EMP47 EMP46 and EMP47 type 1 transmembrane proteins, N-terminal lectin domain

Probab=99.69  E-value=3e-17  Score=114.29  Aligned_cols=45  Identities=31%  Similarity=0.735  Sum_probs=41.7

Q ss_pred             cccccccccccceeecceecC-CCCeEEEeecCCCCCCCeeeEEEEEeee
Q psy7201           2 TDFENKAAWKECFKVSGVKLP-TGYYFGVSAATGDLSDNHDVLGIRTYEL   50 (65)
Q Consensus         2 ~di~~~~~w~~Cf~~~~v~LP-~~~yfGiSAaTG~lsDnhDIis~~~~~l   50 (65)
                      ||+|+    +.||++++|.|| .+|||||||+||+++|+|||++|++|+.
T Consensus       169 v~vd~----~~Cf~~~~v~lP~~~y~fGiSAaTg~~~d~hdIl~~~~~~~  214 (215)
T cd06903         169 VQVDN----RLCFQTDKVQLPQGGYRFGITAANADNPESFEILKLKVWNG  214 (215)
T ss_pred             EEECC----CEEEecCCeecCCCCCEEEEEEcCCCCCCcEEEEEEEEecC
Confidence            67776    899999999999 8999999999999999999999999974

EMP46 and EMP47, N-terminal carbohydrate recognition domain. EMP46 and EMP47 are fungal type-I transmembrane proteins that cycle between the endoplasmic reticulum and the golgi apparatus and are thought to function as cargo receptors that transport newly synthesized glycoproteins. EMP47 is a receptor for EMP46 responsible for the selective transport of EMP46 by forming hetero-oligomerization between the two proteins. EMP46 and EMP47 have an N-terminal lectin-like carbohydrate recognition domain (represented by this alignment model) as well as a C-terminal transmembrane domain. EMP46 and EMP47 are 45% sequence-identical to one another and have sequence homology to a class of intracellular lectins defined by ERGIC-53 and VIP36. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat s

>KOG3839|consensus

Probab=99.64  E-value=3.9e-17  Score=121.50  Aligned_cols=57  Identities=46%  Similarity=0.876  Sum_probs=53.6

Q ss_pred             CcccccccccccceeecceecCCCCeEEEeecCCCCCCCeeeEEEEEeeecCCCCcC
Q psy7201           1 STDFENKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYELEFPGEKL   57 (65)
Q Consensus         1 ~~di~~~~~w~~Cf~~~~v~LP~~~yfGiSAaTG~lsDnhDIis~~~~~l~~~~~~~   57 (65)
                      ++|+.+.++|..|+.+.+|+||.|||||+||+||+++|+|||+|++.|+|...+++.
T Consensus       226 ~~dl~~~~~~~~c~~~n~v~lp~g~~fg~SasTGdlSd~HdivS~kl~~L~d~~~~~  282 (351)
T KOG3839|consen  226 SIDLEGPNEWIDCFSLNNVELPLGYFFGVSASTGDLSDSHDIVSLKLFELTDIHVEG  282 (351)
T ss_pred             EEecCCCceeeeeeeecceecccceEEeeeeccCccchhhHHHHhhhhhhhcccCCC
Confidence            478999999999999999999999999999999999999999999999999886654

>KOG3838|consensus

Probab=99.61  E-value=6.2e-16  Score=118.05  Aligned_cols=56  Identities=45%  Similarity=0.800  Sum_probs=51.1

Q ss_pred             ccccccceeecceecCCCCeEEEeecCCCCCCCeeeEEEEEeeecCCCCcCCCCCCC
Q psy7201           7 KAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYELEFPGEKLSKGPFI   63 (65)
Q Consensus         7 ~~~w~~Cf~~~~v~LP~~~yfGiSAaTG~lsDnhDIis~~~~~l~~~~~~~~~~~~~   63 (65)
                      .+.|+.|.+++++.||.+.|||||||||+|+|+|||+|+.||+|..|. ++.++||.
T Consensus       212 ~d~yE~C~rve~~~lp~nGyFGvSAATGgLADDHDVl~FltfsL~e~~-qeppqP~~  267 (497)
T KOG3838|consen  212 SDDYEFCVRVENLLLPPNGYFGVSAATGGLADDHDVLSFLTFSLSEPG-QEPPQPFL  267 (497)
T ss_pred             CCCcceeEeccceeccCCCeeeeeecccccccccceeeeEEeeecCCC-CCCCCchh
Confidence            478999999999999999999999999999999999999999998554 55888875

>cd07308 lectin_leg-like legume-like lectins: ERGIC-53, ERGL, VIP36, VIPL, EMP46, and EMP47

Probab=99.56  E-value=4.7e-15  Score=100.93  Aligned_cols=46  Identities=61%  Similarity=1.059  Sum_probs=42.8

Q ss_pred             ccccccccceeecceecCCCCeEEEeecCCCCCCCeeeEEEEEeee
Q psy7201           5 ENKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYEL   50 (65)
Q Consensus         5 ~~~~~w~~Cf~~~~v~LP~~~yfGiSAaTG~lsDnhDIis~~~~~l   50 (65)
                      .+.++|+.||+++.+.||.++||||||+||+++|+|||++|++|++
T Consensus       173 ~~~~~~~~c~~~~~~~l~~~~y~G~sA~tg~~~d~~dIls~~~~~~  218 (218)
T cd07308         173 SEGNNWKECFTVEDVILPSQGYFGFSAQTGDLSDNHDILSVHTYEL  218 (218)
T ss_pred             CCCCCccEEEEcCCcccCCCCEEEEEeccCCCcCcEEEEEEEeeeC
Confidence            3467999999999999999999999999999999999999999974

The legume-like (leg-like) lectins are eukaryotic intracellular sugar transport proteins with a carbohydrate recognition domain similar to that of the legume lectins. This domain binds high-mannose-type oligosaccharides for transport from the endoplasmic reticulum to the Golgi complex. These leg-like lectins include ERGIC-53, ERGL, VIP36, VIPL, EMP46, EMP47, and the UIP5 (ULP1-interacting protein 5) precursor protein. Leg-like lectins have different intracellular distributions and dynamics in the endoplasmic reticulum-Golgi system of the secretory pathway and interact with N-glycans of glycoproteins in a calcium-dependent manner, suggesting a role in glycoprotein sorting and trafficking. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "ba

>cd01951 lectin_L-type legume lectins

Probab=98.01  E-value=1e-05  Score=54.97  Aligned_cols=39  Identities=31%  Similarity=0.365  Sum_probs=32.3

Q ss_pred             ccccceeeccee---cCCCCeEEEeecCCCCCCCeeeEEEEE
Q psy7201           9 AWKECFKVSGVK---LPTGYYFGVSAATGDLSDNHDVLGIRT   47 (65)
Q Consensus         9 ~w~~Cf~~~~v~---LP~~~yfGiSAaTG~lsDnhDIis~~~   47 (65)
                      .|..|..+....   +|...|+||||+||+.++.|+|+++++
T Consensus       180 ~~~~~l~~~~~l~~~~~~~~yvGFTAsTG~~~~~h~V~~wsf  221 (223)
T cd01951         180 LTSLDITIPVDLIQLGPTKAYFGFTASTGGLTNLHDILNWSF  221 (223)
T ss_pred             cccccEEEeeeecccCCCcEEEEEEcccCCCcceeEEEEEEe
Confidence            477899874322   488999999999999999999999865

The L-type (legume-type) lectins are a highly diverse family of carbohydrate binding proteins that generally display no enzymatic activity toward the sugars they bind. This family includes arcelin, concanavalinA, the lectin-like receptor kinases, the ERGIC-53/VIP36/EMP46 type1 transmembrane proteins, and an alpha-amylase inhibitor. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "back face". This domain homodimerizes so that adjacent back sheets form a contiguous 12-stranded sheet and homotetramers occur by a back-to-back association of these homodimers. Though L-type lectins exhibit both sequence and structural similarity to one another, their carbohydrate binding specificities differ widely.

>cd06899 lectin_legume_LecRK_Arcelin_ConA legume lectins, lectin-like receptor kinases, arcelin, concanavalinA, and alpha-amylase inhibitor

Probab=97.64  E-value=6.1e-05  Score=52.40  Aligned_cols=28  Identities=39%  Similarity=0.536  Sum_probs=25.3

Q ss_pred             ecCCCCeEEEeecCCCCCCCeeeEEEEE
Q psy7201          20 KLPTGYYFGVSAATGDLSDNHDVLGIRT   47 (65)
Q Consensus        20 ~LP~~~yfGiSAaTG~lsDnhDIis~~~   47 (65)
                      .||+..|+|+||+||++.+.|+|++...
T Consensus       205 ~l~~~~~vGFSasTG~~~~~h~i~sWsF  232 (236)
T cd06899         205 VLPEEVYVGFSASTGLLTELHYILSWSF  232 (236)
T ss_pred             hCCCceEEEEEeEcCCCcceEEEEEEEE
Confidence            4788899999999999999999999754

This alignment model includes the legume lectins (also known as agglutinins), the arcelin (also known as phytohemagglutinin-L) family of lectin-like defense proteins, the LecRK family of lectin-like receptor kinases, concanavalinA (ConA), and an alpha-amylase inhibitor. Arcelin is a major seed glycoprotein discovered in kidney beans (Phaseolus vulgaris) that has insecticidal properties and protects the seeds from predation by larvae of various bruchids. Arcelin is devoid of monosaccharide binding properties and lacks a key metal-binding loop that is present in other members of this family. Phytohaemagglutinin (PHA) is a lectin found in plants, especially beans, that affects cell metabolism by inducing mitosis and by altering the permeability of the cell membrane to various proteins. PHA agglutinates most mammalian red blood cell types by bindin

>PF00139 Lectin_legB: Legume lectin domain; InterPro: IPR001220 Legume lectins are one of the largest lectin families with more than 70 lectins reported

Probab=96.80  E-value=0.00084  Score=46.35  Aligned_cols=27  Identities=41%  Similarity=0.621  Sum_probs=24.3

Q ss_pred             cCCCCeEEEeecCCCCCCCeeeEEEEE
Q psy7201          21 LPTGYYFGVSAATGDLSDNHDVLGIRT   47 (65)
Q Consensus        21 LP~~~yfGiSAaTG~lsDnhDIis~~~   47 (65)
                      ||...|+||||+||.....|+|++...
T Consensus       209 l~~~v~vGFsasTG~~~~~h~I~sW~F  235 (236)
T PF00139_consen  209 LPEQVYVGFSASTGGSYQTHDILSWSF  235 (236)
T ss_dssp             SCSEEEEEEEEEESSSSEEEEEEEEEE
T ss_pred             cCCCcEEEEEeecCCCcceEEEEEEEe
Confidence            677789999999999999999999864

Leguminous plant lectins resemble each other in their physicochemical properties although they differ in their carbohydrate specificities. They consist of two or four subunits with relative molecular mass of 30 kDa and each subunit has one carbohydrate-binding site. The interaction with sugars requires tightly bound calcium and manganese ions. The structural similarities of these lectins are reported by the primary structural analyses and X-ray crystallographic studies. X-ray studies have shown that the folding of the polypeptide chains in the region of the carbohydrate-binding sites is also similar, despite differences in the primary sequences. The carbohydrate-binding sites of these lectins consist of two conserved amino acids on beta pleated sheets. One of these loops contains transition metals, calcium and manganese, which keep the amino acid residues of the sugar-binding site at the required positions. Amino acid sequences of this loop play an important role in the carbohydrate-binding specificities of these lectins. These lectins bind either glucose/mannose or galactose. The exact function of legume lectins is not known but they may be involved in the attachment of nitrogen-fixing bacteria to legumes and in the protection against pathogens. Some legume lectins are proteolytically processed to produce two chains, beta (which corresponds to the N-terminal) and alpha (C-terminal) (IPR000985 from INTERPRO). The lectin concanavalin A (conA) from jack bean is exceptional in that the two chains are transposed and ligated (by formation of a new peptide bond). The N terminus of mature conA thus corresponds to that of the alpha chain and the C terminus to the beta chain.; GO: 0005488 binding; PDB: 1VLN_B 2GDF_C 2JE9_C 2JEC_C 1DGL_B 2P37_B 2CWM_A 2P34_D 2OW4_A 3IPV_B ....

>cd06900 lectin_VcfQ VcfQ bacterial pilus biogenesis protein, lectin domain

Probab=92.69  E-value=0.13  Score=37.72  Aligned_cols=28  Identities=18%  Similarity=0.605  Sum_probs=24.9

Q ss_pred             ecCCCCeEEEeecCCCCCCCeeeEEEEE
Q psy7201          20 KLPTGYYFGVSAATGDLSDNHDVLGIRT   47 (65)
Q Consensus        20 ~LP~~~yfGiSAaTG~lsDnhDIis~~~   47 (65)
                      .+|+..+|+++++||....+|||=.+++
T Consensus       226 avP~~f~lS~TgSTGgstN~HEIdnf~V  253 (255)
T cd06900         226 AIPENFYLSFTGSTGGSTNTHEIDNFQV  253 (255)
T ss_pred             CCCccEEEEEEecCCCcccceeecceEe
Confidence            5888999999999999999999977664

This family includes bacterial proteins homologous to the VcfQ (also known as MshQ) bacterial pilus biogenesis protein. VcfQ is encoded by the vcfQ gene of the type IV pilus gene cluster of Vibrio cholerae and is essential for type IV pilus assembly. VcfQ has a Laminin G-like domain as well as an L-type lectin domain.

>PF09116 gp45-slide_C: gp45 sliding clamp, C terminal; InterPro: IPR015200 This domain is essential for the interaction of the gp45 sliding clamp with the corresponding polymerase

Probab=86.01  E-value=0.63  Score=30.22  Aligned_cols=28  Identities=25%  Similarity=0.593  Sum_probs=16.8

Q ss_pred             cccccccccceeecceecCCCCe-EEEee
Q psy7201           4 FENKAAWKECFKVSGVKLPTGYY-FGVSA   31 (65)
Q Consensus         4 i~~~~~w~~Cf~~~~v~LP~~~y-fGiSA   31 (65)
                      -++..++..||+++|++|..|-| +-||+
T Consensus        59 ~~~~~~F~f~~k~eNmk~~~gdY~V~is~   87 (112)
T PF09116_consen   59 YDGDNNFCFCFKMENMKMLPGDYKVKISK   87 (112)
T ss_dssp             --SS--EEEEEEGGG----SS-EEEEEEE
T ss_pred             cCCCccEEEEEEeceeEeecCCeEEEEEh
Confidence            45566799999999999877777 99998

It adopts a DNA clamp fold, consisting of two alpha helices and two beta sheets - the fold is duplicated and has internal pseudo two-fold symmetry []. ; PDB: 1B8H_A 1B77_B 3U61_F 3U60_G 3U5Z_R 1CZD_B.

>PHA02545 45 sliding clamp; Provisional

Probab=82.92  E-value=1.3  Score=31.91  Aligned_cols=30  Identities=20%  Similarity=0.427  Sum_probs=25.3

Q ss_pred             cccccccccceeecceecCCCCe-EEEeecC
Q psy7201           4 FENKAAWKECFKVSGVKLPTGYY-FGVSAAT   33 (65)
Q Consensus         4 i~~~~~w~~Cf~~~~v~LP~~~y-fGiSAaT   33 (65)
                      .++..++..|+++++++|+.|-| +-+|++-
T Consensus       171 ~~g~~~F~f~~~~~Nmk~~~gdY~v~is~~g  201 (223)
T PHA02545        171 YDGDNEFNFIIKIENMKLVPGDYKVSISKKG  201 (223)
T ss_pred             ccCCcceEEEEEeceeEecCCCeEEEEEccc
Confidence            45566899999999999988877 9998874

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	65
2duo_A	253	Crystal Structure Of Vip36 ExoplasmicLUMENAL DOMAIN		2e-14
1r1z_A	263	The Crystal Structure Of The Carbohydrate Recogniti		3e-07
1gv9_A	260	P58ERGIC-53 Length = 260		3e-07
3a4u_A	255	Crystal Structure Of Mcfd2 In Complex With Carbohyd		1e-06
3lcp_A	247	Crystal Structure Of The Carbohydrate Recognition D		1e-06

>pdb|2DUO|A Chain A, Crystal Structure Of Vip36 ExoplasmicLUMENAL DOMAIN, CA2+- Bound Form Length = 253

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 29/49 (59%), Positives = 39/49 (79%)
Query: 2   TDFENKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYEL 50
           TD E+K  WK C  ++GV+LPTGYYFG SA TGDLSDNHD++ ++ ++L
Sbjct: 180 TDLEDKNEWKNCIDITGVRLPTGYYFGASAGTGDLSDNHDIISMKLFQL 228

>pdb|1R1Z|A Chain A, The Crystal Structure Of The Carbohydrate Recognition Domain Of The Glycoprotein Sorting Receptor P58ERGIC-53 Reveals A Novel Metal Binding Site And Conformational Changes Associated With Calcium Ion Binding Length = 263

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/51 (45%), Positives = 36/51 (70%)
Query: 6   NKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYELEFPGEK 56
           +K  ++ C KV  + +PT  +FG+SAATG L+D+HDVL   T++L  PG++
Sbjct: 210 DKNDYEFCAKVENMVIPTQGHFGISAATGGLADDHDVLSFLTFQLTEPGKE 260

>pdb|1GV9|A Chain A, P58ERGIC-53 Length = 260

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/51 (45%), Positives = 36/51 (70%)
Query: 6   NKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYELEFPGEK 56
           +K  ++ C KV  + +PT  +FG+SAATG L+D+HDVL   T++L  PG++
Sbjct: 207 DKNDYEFCAKVENMVIPTQGHFGISAATGGLADDHDVLSFLTFQLTEPGKE 257

>pdb|3A4U|A Chain A, Crystal Structure Of Mcfd2 In Complex With Carbohydrate Recognition Domain Of Ergic-53 Length = 255

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 6   NKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYELEFPGEK 56
           +K  ++ C KV  + +P   +FG+SAATG L+D+HDVL   T++L  PG++
Sbjct: 193 DKNDYEFCAKVENMIIPAQGHFGISAATGGLADDHDVLSFLTFQLTEPGKE 243

>pdb|3LCP|A Chain A, Crystal Structure Of The Carbohydrate Recognition Domain Of Complex With Mcfd2 Length = 247

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 6   NKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYELEFPGEK 56
           +K  ++ C KV  + +P   +FG+SAATG L+D+HDVL   T++L  PG++
Sbjct: 193 DKNDYEFCAKVENMIIPAQGHFGISAATGGLADDHDVLSFLTFQLTEPGKE 243

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	65
1gv9_A	260	P58/ergic-53; lectin, carbohydrate binding; 1.46A	8e-17
2a6v_A	226	EMP46P; beta sandwich, carbohydrate binding protei	5e-16
2a6z_A	222	EMP47P (FORM2); beta sandwich, carbohydrate bindin	4e-15
2a6y_A	256	EMP47P (FORM1); beta sandwich, carbohydrate bindin	4e-15
2dur_A	253	VIP36;, vesicular integral-membrane protein VIP36;	1e-12

>1gv9_A P58/ergic-53; lectin, carbohydrate binding; 1.46A {Rattus norvegicus} SCOP: b.29.1.13 PDB: 1r1z_A 3a4u_A 3lcp_A Length = 260

 Score = 70.3 bits (171), Expect = 8e-17
 Identities = 23/52 (44%), Positives = 36/52 (69%)

Query: 5   ENKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYELEFPGEK 56
            +K  ++ C KV  + +PT  +FG+SAATG L+D+HDVL   T++L  PG++
Sbjct: 206 PDKNDYEFCAKVENMVIPTQGHFGISAATGGLADDHDVLSFLTFQLTEPGKE 257

>2a6v_A EMP46P; beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.52A {Saccharomyces cerevisiae} SCOP: b.29.1.13 PDB: 2a6w_A 2a6x_A Length = 226

 Score = 67.6 bits (165), Expect = 5e-16
 Identities = 9/49 (18%), Positives = 22/49 (44%), Gaps = 2/49 (4%)

Query: 4   FENKAAWKECFKVSGVKLP--TGYYFGVSAATGDLSDNHDVLGIRTYEL 50
            + +   + CF+   VK    + +  G SA      ++ ++L ++ Y+ 
Sbjct: 172 LKLQMDNRVCFQTRKVKFMGSSPFRIGTSAINDASKESFEILKMKLYDG 220

>2a6z_A EMP47P (FORM2); beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.00A {Saccharomyces cerevisiae} SCOP: b.29.1.13 PDB: 2a70_A 2a71_A Length = 222

 Score = 65.0 bits (158), Expect = 4e-15
 Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 4   FENKAAWKECFKVSGVKLPTG-YYFGVSAATGDLSDNHDVLGIRTYEL 50
            + +   K CF+   V+ P+G Y  GV+A  G +++N +   I   + 
Sbjct: 171 LKVQVDNKVCFQTRKVRFPSGSYRIGVTAQNGAVNNNAESFEIFKMQF 218

>2a6y_A EMP47P (FORM1); beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.42A {Saccharomyces cerevisiae} SCOP: b.29.1.13 Length = 256

 Score = 65.4 bits (159), Expect = 4e-15
 Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 4   FENKAAWKECFKVSGVKLPTG-YYFGVSAATGDLSDNHDVLGIRTYEL 50
            + +   K CF+   V+ P+G Y  GV+A  G +++N +   I   + 
Sbjct: 178 LKVQVDNKVCFQTRKVRFPSGSYRIGVTAQNGAVNNNAESFEIFKMQF 225

>2dur_A VIP36;, vesicular integral-membrane protein VIP36; beta sandwich, carbohydrate binding protein, cargo receptor, transport; HET: MAN; 1.65A {Canis lupus familiaris} PDB: 2dup_A 2duq_A* 2duo_A* 2e6v_A* Length = 253

 Score = 58.8 bits (141), Expect = 1e-12
 Identities = 29/53 (54%), Positives = 39/53 (73%)

Query: 1   STDFENKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYELEFP 53
            TD E+K  WK C  ++GV+LPTGYYFG SA TGDLSDNHD++ ++ ++L   
Sbjct: 179 MTDLEDKNEWKNCIDITGVRLPTGYYFGASAGTGDLSDNHDIISMKLFQLMVE 231

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	65
2a6v_A	226	EMP46P; beta sandwich, carbohydrate binding protei	99.71
2a6z_A	222	EMP47P (FORM2); beta sandwich, carbohydrate bindin	99.55
2dur_A	253	VIP36;, vesicular integral-membrane protein VIP36;	99.55
1gv9_A	260	P58/ergic-53; lectin, carbohydrate binding; 1.46A	99.54
2a6y_A	256	EMP47P (FORM1); beta sandwich, carbohydrate bindin	99.43
2fmd_A	240	Lectin, agglutinin, BMA; legume lectin, beta sandw	98.25
2bqp_A	234	Protein (PEA lectin); D-glucopyranose complex, sug	98.19
2ltn_B	52	PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP	97.82
1g7y_A	253	Stem/LEAF lectin DB58; jelly roll fold, sugar bind	97.82
1qmo_E	133	Mannose binding lectin, FRIL; crosslink, hematopoi	97.79
1hql_A	257	Lectin; xenograft antigen, sugar BI protein; HET:	97.78
1n47_A	233	Isolectin B4; cancer antigen, vicia villosa lectin	97.77
1fat_A	252	Phytohemagglutinin-L; glycoprotein, plant defense	97.77
1f9k_A	238	Acidic lectin; legume lectin, glycosylated protein	97.71
1avb_A	226	Arcelin-1; lectin-like glycoprotein, plant defense	97.67
1dhk_B	223	Bean lectin-like inhibitor, porcine pancreatic alp	97.66
1sbf_A	253	Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {G	97.64
1gsl_A	243	Griffonia simplicifolia lectin 4; glycoprotein, ma	97.63
1ioa_A	240	Arcelin-5A, ARC5A; lectin-like proteins, plant def	97.6
1qnw_A	242	Chitin binding lectin, UEA-II; carbohydrate bindin	97.45
1fny_A	237	BARK lectin, BARK agglutinin I,polypeptide A; legu	97.42
1dbn_A	239	MAL, protein (leukoagglutinin); plant lectin, carb	97.42
1gzc_A	239	Erythrina crista-galli lectin; carbohydrate, sugar	97.36
2eig_A	234	Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG bin	97.31
1wbf_A	242	Protein (agglutinin); lectin (agglutinin), legume	97.13
3zyr_A	261	Lectin; sugar binding protein, N-glycan; HET: NAG	97.11
1nls_A	237	Concanavalin A; lectin, agglutinin; 0.94A {Canaval	97.04
1fx5_A	242	UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HO	97.01
3ipv_A	251	Lectin alpha chain; galactose binding, SEED lectin	96.9
3ujo_A	281	Legume lectin; carbohydrate-binding, galactose, ad	96.65
1v6i_A	232	Agglutinin, PNA, galactose-binding lectin; open qu	96.11

>2a6v_A EMP46P; beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.52A {Saccharomyces cerevisiae} SCOP: b.29.1.13 PDB: 2a6w_A 2a6x_A

Probab=99.71  E-value=5.2e-18  Score=117.94  Aligned_cols=50  Identities=20%  Similarity=0.400  Sum_probs=44.9

Q ss_pred             cccccccccccceeecceecCCCC--eEEEeecCCCCCCCeeeEEEEEeeecCCCC
Q psy7201           2 TDFENKAAWKECFKVSGVKLPTGY--YFGVSAATGDLSDNHDVLGIRTYELEFPGE   55 (65)
Q Consensus         2 ~di~~~~~w~~Cf~~~~v~LP~~~--yfGiSAaTG~lsDnhDIis~~~~~l~~~~~   55 (65)
                      |++|+    +.||++++|.||.++  ||||||+||+++|+|||++|++|++..+++
T Consensus       174 v~id~----~~Cf~~~~v~LP~g~~~yfGiSAaTg~~~D~hdils~~~~~~~~~~~  225 (226)
T 2a6v_A          174 LQMDN----RVCFQTRKVKFMGSSPFRIGTSAINDASKESFEILKMKLYDGVIEDS  225 (226)
T ss_dssp             EEETT----EEEEEESCCCGGGTSCBEEEEEEECCTTCCEEEEEEEEEESSCCC--
T ss_pred             EEEcC----CeeEEECCeecCCCCccEEEEEEcCCCCcccEEEEEEEEEecccccc
Confidence            56665    899999999999999  999999999999999999999999987753

>2a6z_A EMP47P (FORM2); beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.00A {Saccharomyces cerevisiae} SCOP: b.29.1.13 PDB: 2a70_A 2a71_A

Probab=99.55  E-value=2.4e-15  Score=103.40  Aligned_cols=45  Identities=24%  Similarity=0.617  Sum_probs=41.7

Q ss_pred             cccccccccccceeecceecCCCC-eEEEeecCC---CCCCCeeeEEEEEeee
Q psy7201           2 TDFENKAAWKECFKVSGVKLPTGY-YFGVSAATG---DLSDNHDVLGIRTYEL   50 (65)
Q Consensus         2 ~di~~~~~w~~Cf~~~~v~LP~~~-yfGiSAaTG---~lsDnhDIis~~~~~l   50 (65)
                      |++++    +.||++++|.||+++ ||||||+||   +++|+|||+++++|+.
T Consensus       173 v~id~----~~C~~~~~v~LP~~~~y~G~SA~TG~l~~~~d~hdil~~~~~~~  221 (222)
T 2a6z_A          173 VQVDN----KVCFQTRKVRFPSGSYRIGVTAQNGAVNNNAESFEIFKMQFFNG  221 (222)
T ss_dssp             EEETT----EEEEEESCCCCCSSEEEEEEEEECCSGGGCCCEEEEEEEEEEEC
T ss_pred             EEEcC----eEEEEeCCeecCCCCcEEEEEEcCCCCCCCCccEEEEEEEEEcC
Confidence            67777    899999999999996 799999999   9999999999999985

>2dur_A VIP36;, vesicular integral-membrane protein VIP36; beta sandwich, carbohydrate binding protein, cargo receptor, transport; HET: MAN; 1.65A {Canis lupus familiaris} PDB: 2dup_A 2duq_A* 2duo_A* 2e6v_A*

Probab=99.55  E-value=4.6e-15  Score=102.85  Aligned_cols=55  Identities=51%  Similarity=1.034  Sum_probs=49.9

Q ss_pred             ccccccccccceeecceecCCCCeEEEeecCCCCCCCeeeEEEEEeeecCCCCcC
Q psy7201           3 DFENKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYELEFPGEKL   57 (65)
Q Consensus         3 di~~~~~w~~Cf~~~~v~LP~~~yfGiSAaTG~lsDnhDIis~~~~~l~~~~~~~   57 (65)
                      +..+.+.|+.|+++.++.||++.||||||+||+++++|||+++++|++..++..+
T Consensus       181 ~~~~~~~~~~~~~~~~v~Lp~~~yvGfSAaTG~~~~~h~Ilswsf~sl~~~~~~~  235 (253)
T 2dur_A          181 DLEDKNEWKNCIDITGVRLPTGYYFGASAGTGDLSDNHDIISMKLFQLMVEHTPD  235 (253)
T ss_dssp             ECSSSSCCEEEEEECCEECCSSBEEEEEEEESSSCCEEEEEEEEEEECCCCCCHH
T ss_pred             eCCCCCCceEEEEeCCcccCCCcEEEEEeccCCCcceEEEEEEEEEecccCCCCc
Confidence            3445568999999999999999999999999999999999999999999988765

>1gv9_A P58/ergic-53; lectin, carbohydrate binding; 1.46A {Rattus norvegicus} SCOP: b.29.1.13 PDB: 1r1z_A 3a4u_A 3lcp_A

Probab=99.54  E-value=6.2e-15  Score=102.87  Aligned_cols=50  Identities=46%  Similarity=0.761  Sum_probs=43.6

Q ss_pred             ccccccceeecceecCCCCeEEEeecCCCCCCCeeeEEEEEeeecCCCCc
Q psy7201           7 KAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYELEFPGEK   56 (65)
Q Consensus         7 ~~~w~~Cf~~~~v~LP~~~yfGiSAaTG~lsDnhDIis~~~~~l~~~~~~   56 (65)
                      ...|+.|++++++.||++.||||||+||+++|+|||+|+++|+|..+...
T Consensus       208 ~~~~~~~~~vd~~~LP~~~~vGfSAaTG~~~e~hdIlsw~~~~l~~~~~~  257 (260)
T 1gv9_A          208 KNDYEFCAKVENMVIPTQGHFGISAATGGLADDHDVLSFLTFQLTEPGKE  257 (260)
T ss_dssp             TTCCEEEEEETTCCCCSSBEEEEEEECCSSCCEEEEEEEEEEEEEC----
T ss_pred             CCcceEEEEEcccccCCCcEEEEEEeCCCCcceEEEEEEEEEEeecCCCC
Confidence            34799999999999999999999999999999999999999999987654

>2a6y_A EMP47P (FORM1); beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.42A {Saccharomyces cerevisiae} SCOP: b.29.1.13

Probab=99.43  E-value=8.9e-14  Score=97.23  Aligned_cols=47  Identities=23%  Similarity=0.585  Sum_probs=42.5

Q ss_pred             cccccccccccceeecceecCCCC-eEEEeecCC---CCCCCeeeEEEEEeeecC
Q psy7201           2 TDFENKAAWKECFKVSGVKLPTGY-YFGVSAATG---DLSDNHDVLGIRTYELEF   52 (65)
Q Consensus         2 ~di~~~~~w~~Cf~~~~v~LP~~~-yfGiSAaTG---~lsDnhDIis~~~~~l~~   52 (65)
                      |++++    +.||++.+|.||+++ ||||||+||   +++|+|||+++++|+...
T Consensus       180 V~i~~----~~c~~~~~v~LP~~~~~~GfSAaTG~~~~~~d~hdIls~~~~~~~~  230 (256)
T 2a6y_A          180 VQVDN----KVCFQTRKVRFPSGSYRIGVTAQNGAVNNNAESFEIFKMQFFNGVI  230 (256)
T ss_dssp             EEETT----EEEEEESCEECCSEEEEEEEEEECCSGGGCCCEEEEEEEEEEESCS
T ss_pred             EEEcC----EEEEEECcEEeCCCCeEEEEEEeCCCCCCCcceEEEEEEEEEeccc
Confidence            56666    689999999999997 799999999   999999999999999665

>2fmd_A Lectin, agglutinin, BMA; legume lectin, beta sandwich, protein-carbohydrate complex, sugar binding protein; HET: MAN; 1.90A {Bowringia mildbraedii}

Probab=98.25  E-value=7.1e-07  Score=61.66  Aligned_cols=41  Identities=22%  Similarity=0.195  Sum_probs=32.0

Q ss_pred             ccccceeecc-eecCCCCeEEEeecCCCCCCCeeeEEEEEee
Q psy7201           9 AWKECFKVSG-VKLPTGYYFGVSAATGDLSDNHDVLGIRTYE   49 (65)
Q Consensus         9 ~w~~Cf~~~~-v~LP~~~yfGiSAaTG~lsDnhDIis~~~~~   49 (65)
                      .+..|..+.- -.||+..|+|+||+||++.+.|+|+++....
T Consensus       191 ~~~ls~~vdL~~~l~~~~yvGFSAsTG~~~~~H~IlsWsF~s  232 (240)
T 2fmd_A          191 PVVVSFDVELNNVBPBWVRVGFSATTGQYTQTNNILAWSFRS  232 (240)
T ss_dssp             CEEEEEECCGGGTSCSEEEEEEEEECCSSCBCCEEEEEEEEE
T ss_pred             ceEEEEEechHHhCCCceEEEEEeccCCccccEEEEEEEeEe
Confidence            4455655432 1479999999999999999999999987654

>2bqp_A Protein (PEA lectin); D-glucopyranose complex, sugar binding protein; HET: GLC; 1.90A {Pisum sativum} SCOP: b.29.1.1

Probab=98.19  E-value=8.6e-07  Score=60.97  Aligned_cols=38  Identities=29%  Similarity=0.204  Sum_probs=29.7

Q ss_pred             cccceeecc-eecCCCCeEEEeecCCCCCCCeeeEEEEE
Q psy7201          10 WKECFKVSG-VKLPTGYYFGVSAATGDLSDNHDVLGIRT   47 (65)
Q Consensus        10 w~~Cf~~~~-v~LP~~~yfGiSAaTG~lsDnhDIis~~~   47 (65)
                      +..|..+.- -.||+..|+|+||+||++.+.|||+++..
T Consensus       191 ~~ls~~vdL~~~l~~~~yvGFSAsTG~~~~~H~IlsWsF  229 (234)
T 2bqp_A          191 YTLSDVVSLKDVVPEWVRIGFSATTGAEYAAHEVLSWSF  229 (234)
T ss_dssp             EEEEEECCGGGTSCSEEEEEEEEECSSSCCEEEEEEEEE
T ss_pred             ceEEEEechHHhCCCceEEEEEeccCCCcccEEEEEEEE
Confidence            445544422 13799999999999999999999999865

>2ltn_B PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP: b.29.1.1 PDB: 1hkd_B 1rin_B* 1ofs_B* 1bqp_B* 1loe_B 1loa_B* 1loc_B* 1lod_B* 1lob_B 1lof_B* 1log_B* 1lof_D* 1les_B* 2b7y_B* 1lgc_B* 1lgb_B* 1len_B 1lem_B 2lal_B

Probab=97.82  E-value=1.6e-05  Score=44.43  Aligned_cols=28  Identities=32%  Similarity=0.345  Sum_probs=25.1

Q ss_pred             cCCCCeEEEeecCCCCCCCeeeEEEEEe
Q psy7201          21 LPTGYYFGVSAATGDLSDNHDVLGIRTY   48 (65)
Q Consensus        21 LP~~~yfGiSAaTG~lsDnhDIis~~~~   48 (65)
                      ||..-|+||||+||...+.|+|++...-
T Consensus        16 l~e~v~VGFSAsTG~~~~~h~IlsWsF~   43 (52)
T 2ltn_B           16 VPEWVRIGFSATTGAEYAAHEVLSWSFH   43 (52)
T ss_dssp             SCSEEEEEEEEECCSSCCEEEEEEEEEE
T ss_pred             cCceEEEEEEeccCCcceeEEEEEeEEE
Confidence            7888899999999999999999998653

>1g7y_A Stem/LEAF lectin DB58; jelly roll fold, sugar binding protein; HET: NAG FUC FUL; 2.50A {Vigna unguiculata subsp} SCOP: b.29.1.1 PDB: 1lul_A 1lu1_A* 1bjq_A* 1lu2_A*

Probab=97.82  E-value=2.5e-05  Score=54.50  Aligned_cols=42  Identities=29%  Similarity=0.270  Sum_probs=32.9

Q ss_pred             ccccceeecc-eecCCCCeEEEeecCCCC---CCCeeeEEEEEeee
Q psy7201           9 AWKECFKVSG-VKLPTGYYFGVSAATGDL---SDNHDVLGIRTYEL   50 (65)
Q Consensus         9 ~w~~Cf~~~~-v~LP~~~yfGiSAaTG~l---sDnhDIis~~~~~l   50 (65)
                      .+..|..+.- -.||+..|+||||+||.+   .+.|+|++.....-
T Consensus       187 ~~~ls~~vdL~~~l~e~~~VGFSAsTG~~~~~~~~H~IlsWsF~s~  232 (253)
T 1g7y_A          187 SYIVSERVDITNELPEYVSIGFSATTGLSEGYTETHDVLSWSFASK  232 (253)
T ss_dssp             EEEEEEECCHHHHSCSEEEEEEEEECCSSSSCCCCCEEEEEEEEEE
T ss_pred             cceEEEEechHHhCCCceEEEEEeCcCCCCcccceeEEEEEEEEee
Confidence            4566665432 147999999999999999   99999999877553

>1qmo_E Mannose binding lectin, FRIL; crosslink, hematopoietic progenitor, sugar complex; HET: MAN; 3.5A {Dolichos lab lab} SCOP: b.29.1.1

Probab=97.79  E-value=1.5e-05  Score=51.62  Aligned_cols=29  Identities=28%  Similarity=0.290  Sum_probs=25.6

Q ss_pred             cCCCCeEEEeecCCCCCCCeeeEEEEEee
Q psy7201          21 LPTGYYFGVSAATGDLSDNHDVLGIRTYE   49 (65)
Q Consensus        21 LP~~~yfGiSAaTG~lsDnhDIis~~~~~   49 (65)
                      ||...|+||||+||...+.|+|++.....
T Consensus        84 l~e~v~VGFSAsTG~~~~~h~IlsWsF~s  112 (133)
T 1qmo_E           84 LPEWVRVGLSASTGQDKERNTVHSWSFTS  112 (133)
T ss_dssp             SCSEEEEEEEEECSSSCCEEEEEEEEEEE
T ss_pred             ccccEEEEEEeccCCCcceeEEEEEEEEe
Confidence            67778999999999999999999987644

>1hql_A Lectin; xenograft antigen, sugar BI protein; HET: GLA MBG NAG; 2.20A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1gnz_A*

Probab=97.78  E-value=1.4e-05  Score=55.87  Aligned_cols=41  Identities=24%  Similarity=0.232  Sum_probs=32.5

Q ss_pred             ccccceeecc-eecCCCCeEEEeecCC-CCCCCeeeEEEEEee
Q psy7201           9 AWKECFKVSG-VKLPTGYYFGVSAATG-DLSDNHDVLGIRTYE   49 (65)
Q Consensus         9 ~w~~Cf~~~~-v~LP~~~yfGiSAaTG-~lsDnhDIis~~~~~   49 (65)
                      .+..|..+.- -.||+..|+||||+|| .+.+.|+|++.....
T Consensus       195 ~~~ls~~vdL~~~l~e~~~vGFSAsTG~~~~~~H~IlsWsF~s  237 (257)
T 1hql_A          195 DYILSHSVDMRQNLPESVRVGISASTGNNQFLTVYILSWRFSS  237 (257)
T ss_dssp             EEEEEEECCGGGTSCSEEEEEEEEECCSCCCEEEEEEEEEEEE
T ss_pred             ceeeEEeechHHhcCCceEEEEEeccCCCccceeEEEEEEeEe
Confidence            4566766532 2478889999999999 999999999987654

>1n47_A Isolectin B4; cancer antigen, vicia villosa lectin, glycoprotein TN-bindin protein, carbohydrate recognition, sugar binding protein; HET: NAG FUC TNR; 2.70A {Vicia villosa} SCOP: b.29.1.1

Probab=97.77  E-value=1.3e-05  Score=55.20  Aligned_cols=39  Identities=26%  Similarity=0.263  Sum_probs=31.5

Q ss_pred             ccccceeecc-eecCCCCeEEEeecCCCC---CCCeeeEEEEE
Q psy7201           9 AWKECFKVSG-VKLPTGYYFGVSAATGDL---SDNHDVLGIRT   47 (65)
Q Consensus         9 ~w~~Cf~~~~-v~LP~~~yfGiSAaTG~l---sDnhDIis~~~   47 (65)
                      .+..|..+.- -.||+..|+||||+||.+   .+.|+|++...
T Consensus       186 ~~~ls~~vdL~~~l~~~~~vGFSAsTG~~~~~~~~h~IlsWsF  228 (233)
T 1n47_A          186 SYAVSARVDLRDILPEYVRVGFSATTGLNAGVVETHDIVSWSF  228 (233)
T ss_dssp             EEEEEEECCGGGTSCSEEEEEEEEEECSSTTCCCCCEEEEEEE
T ss_pred             cceEEEEechHHhCCCceEEEEEeccCCCccccceeEEEEEEE
Confidence            4567766532 247888999999999999   99999999865

>1fat_A Phytohemagglutinin-L; glycoprotein, plant defense protein, lectin; HET: NAG; 2.80A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1g8w_A*

Probab=97.77  E-value=1.8e-05  Score=55.19  Aligned_cols=42  Identities=26%  Similarity=0.158  Sum_probs=32.8

Q ss_pred             ccccceeecc-eecCCCCeEEEeecCCCC---CCCeeeEEEEEeee
Q psy7201           9 AWKECFKVSG-VKLPTGYYFGVSAATGDL---SDNHDVLGIRTYEL   50 (65)
Q Consensus         9 ~w~~Cf~~~~-v~LP~~~yfGiSAaTG~l---sDnhDIis~~~~~l   50 (65)
                      .+..|..+.- -.||+..|+||||+||.+   .+.|+|++.....-
T Consensus       186 ~~~ls~~vdL~~~l~e~~~VGFSAsTG~~~~~~~~H~IlsWsF~s~  231 (252)
T 1fat_A          186 SFIVSDTVDLKSVLPEWVSVGFSATTGINKGNVETNDVLSWSFASK  231 (252)
T ss_dssp             EEEEEEECCHHHHSCSEEEEEEEEEECSSTTBCCCCEEEEEEEEEE
T ss_pred             cceEEEEechHHhCCCceEEEEEeccCCCCcccceEEEEEEEEEee
Confidence            3556665432 248999999999999999   99999999876553

>1f9k_A Acidic lectin; legume lectin, glycosylated protein, H-antigenic specificity agglutinin, sugar binding protein; HET: NAG MAN AMG; 3.00A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 1fay_A*

Probab=97.71  E-value=1.7e-05  Score=54.70  Aligned_cols=30  Identities=23%  Similarity=0.385  Sum_probs=26.5

Q ss_pred             ecCC--CCeEEEeecCCCC---CCCeeeEEEEEee
Q psy7201          20 KLPT--GYYFGVSAATGDL---SDNHDVLGIRTYE   49 (65)
Q Consensus        20 ~LP~--~~yfGiSAaTG~l---sDnhDIis~~~~~   49 (65)
                      .||+  ..|+|+||+||.+   .+.|+|++.....
T Consensus       198 ~l~~~~~~~vGFSAsTG~~~~~~~~h~IlsWsF~s  232 (238)
T 1f9k_A          198 EFPNSEWVNVGLSATTGYQKNAVETHEIISWSFTS  232 (238)
T ss_dssp             HSTTCSEEEEEEEEEECSSTTCCCEEEEEEEEEEE
T ss_pred             hCCCCceEEEEEEeCcCCCCcccceEEEEEeEeEe
Confidence            3899  7899999999999   9999999987643

>1avb_A Arcelin-1; lectin-like glycoprotein, plant defense, insecticidal activi lectin; HET: NAG; 1.90A {Phaseolus vulgaris} SCOP: b.29.1.1

Probab=97.67  E-value=1.7e-05  Score=54.52  Aligned_cols=28  Identities=25%  Similarity=0.364  Sum_probs=25.6

Q ss_pred             ecCCCCeEEEeecCCCC---CCCeeeEEEEE
Q psy7201          20 KLPTGYYFGVSAATGDL---SDNHDVLGIRT   47 (65)
Q Consensus        20 ~LP~~~yfGiSAaTG~l---sDnhDIis~~~   47 (65)
                      .||+..|+|+||+||.+   .+.|+|++...
T Consensus       191 ~l~e~~~VGFSAsTG~~~~~~~~h~IlsWsF  221 (226)
T 1avb_A          191 EVEDWVSVGFSATSGSKKETTETHNVLSWSF  221 (226)
T ss_dssp             HSCSEEEEEEEEEECSSGGGCEEEEEEEEEE
T ss_pred             hCCCceEEEEEeccCCCCcccceeEEEEEEE
Confidence            37999999999999999   99999999865

>1dhk_B Bean lectin-like inhibitor, porcine pancreatic alpha-amylase; CO (hydrolase-inhibitor), complex (hydrolase-inhibitor) comple; HET: NAG; 1.85A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1viw_B*

Probab=97.66  E-value=2e-05  Score=54.26  Aligned_cols=30  Identities=27%  Similarity=0.297  Sum_probs=26.6

Q ss_pred             ecCCCCeEEEeecCCCC---CCCeeeEEEEEee
Q psy7201          20 KLPTGYYFGVSAATGDL---SDNHDVLGIRTYE   49 (65)
Q Consensus        20 ~LP~~~yfGiSAaTG~l---sDnhDIis~~~~~   49 (65)
                      .||+..|+|+||+||.+   .+.|+|++.....
T Consensus       170 ~l~e~~~VGFSAsTG~~~~~~~~H~IlsWsF~s  202 (223)
T 1dhk_B          170 EVYDWVSVGFSATSGAYQWSYETHDVLSWSFSS  202 (223)
T ss_dssp             GGGSEEEEEEEEEECSGGGSCCEEEEEEEEEEE
T ss_pred             hCCCceEEEEEeccCCCccccceEEEEEEEEEe
Confidence            37888899999999999   9999999987644

>1sbf_A Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {Glycine max} SCOP: b.29.1.1 PDB: 1sbd_A* 1sbe_A* 1g9f_A* 2sba_A*

Probab=97.64  E-value=2.9e-05  Score=54.22  Aligned_cols=42  Identities=31%  Similarity=0.159  Sum_probs=33.0

Q ss_pred             ccccceeecc-eecCCCCeEEEeecCCCC--CCCeeeEEEEEeee
Q psy7201           9 AWKECFKVSG-VKLPTGYYFGVSAATGDL--SDNHDVLGIRTYEL   50 (65)
Q Consensus         9 ~w~~Cf~~~~-v~LP~~~yfGiSAaTG~l--sDnhDIis~~~~~l   50 (65)
                      .+..|..+.- -.||+..|+||||+||.+  .+.|+|++.....-
T Consensus       187 ~~~ls~~vdL~~~l~e~~~VGFSAsTG~~~~~~~H~IlsWsF~s~  231 (253)
T 1sbf_A          187 SNILSDVVDLKTSLPEWVRIGFSAATGLDIPGESHDVLSWSFASN  231 (253)
T ss_dssp             EEEEEEECCHHHHSCSEEEEEEEEEECSSSCCCEEEEEEEEEEEE
T ss_pred             cceEEEEechHHhCCCceEEEEEeccCCCccceeeEEEEEEeEee
Confidence            4566766532 247998999999999999  99999999876543

>1gsl_A Griffonia simplicifolia lectin 4; glycoprotein, manganese; HET: FUC GAL MAG NAG BMA; 2.00A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1lec_A* 1led_A*

Probab=97.63  E-value=3e-05  Score=53.76  Aligned_cols=40  Identities=20%  Similarity=0.232  Sum_probs=31.2

Q ss_pred             ccccceeecc-eecCCCCeEEEeecCCCCCCCeeeEEEEEee
Q psy7201           9 AWKECFKVSG-VKLPTGYYFGVSAATGDLSDNHDVLGIRTYE   49 (65)
Q Consensus         9 ~w~~Cf~~~~-v~LP~~~yfGiSAaTG~lsDnhDIis~~~~~   49 (65)
                      .+..|..+.- -.||+..|+||||+|| +.+.|+|++.....
T Consensus       196 ~~~ls~~vdL~~~l~~~~~vGFSAsTG-~~~~h~IlsWsF~s  236 (243)
T 1gsl_A          196 DYILSHVVDLAKVLPQKVRIGFSAGVG-YDEVTYILSWHFFS  236 (243)
T ss_dssp             EEEEEEECCHHHHSCSEEEEEEEEEEC-BSEEEEEEEEEEEE
T ss_pred             ceeEEEEechHHhCCCceEEEEEeccC-CcceeEEEEEEEEe
Confidence            4566765532 2479999999999999 99999999987643

>1ioa_A Arcelin-5A, ARC5A; lectin-like proteins, plant defense proteins, lectin; HET: NAG FUC; 2.70A {Phaseolus vulgaris} SCOP: b.29.1.1

Probab=97.60  E-value=3.6e-05  Score=53.31  Aligned_cols=29  Identities=24%  Similarity=0.277  Sum_probs=26.1

Q ss_pred             cCCCCeEEEeecCCCC---CCCeeeEEEEEee
Q psy7201          21 LPTGYYFGVSAATGDL---SDNHDVLGIRTYE   49 (65)
Q Consensus        21 LP~~~yfGiSAaTG~l---sDnhDIis~~~~~   49 (65)
                      ||+..|+|+||+||.+   .+.|+|++.....
T Consensus       194 l~e~v~VGFSAsTG~~~~~~~~H~IlsWsF~s  225 (240)
T 1ioa_A          194 VDEWVSVGFSPTSGLTEDTTETHDVLSWSFSS  225 (240)
T ss_dssp             SCSEEEEEEEEEECSSTTTCBCCEEEEEEEEE
T ss_pred             CCCceEEEEEeccCCCCcccceeEEEEEEEEe
Confidence            7888899999999999   9999999987644

>1qnw_A Chitin binding lectin, UEA-II; carbohydrate binding; HET: NAG; 2.35A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1dzq_A* 1qoo_A* 1qos_A* 1qot_A*

Probab=97.45  E-value=5.7e-05  Score=52.37  Aligned_cols=30  Identities=30%  Similarity=0.350  Sum_probs=26.5

Q ss_pred             ecCCCCeEEEeecCCCC--CCCeeeEEEEEee
Q psy7201          20 KLPTGYYFGVSAATGDL--SDNHDVLGIRTYE   49 (65)
Q Consensus        20 ~LP~~~yfGiSAaTG~l--sDnhDIis~~~~~   49 (65)
                      .||+..|+|+||+||.+  .+.|+|++.....
T Consensus       205 ~l~e~v~VGFSAsTG~~~~~~~h~IlsWsF~s  236 (242)
T 1qnw_A          205 ILPEWVSVGFSGGVGNAAEFETHDVLSWYFTS  236 (242)
T ss_dssp             HSCSEEEEEEEEEESCGGGCBCCEEEEEEEEE
T ss_pred             hcCCceEEEEEeccCCCccceEEEEEEEEeEe
Confidence            47888899999999999  9999999987643

>1fny_A BARK lectin, BARK agglutinin I,polypeptide A; legume lectin, jelly roll, sugar binding protein; 1.81A {Robinia pseudoacacia} SCOP: b.29.1.1 PDB: 1fnz_A*

Probab=97.42  E-value=8.4e-05  Score=51.37  Aligned_cols=29  Identities=38%  Similarity=0.350  Sum_probs=25.7

Q ss_pred             ecCCCCeEEEeecCCCC---CCCeeeEEEEEe
Q psy7201          20 KLPTGYYFGVSAATGDL---SDNHDVLGIRTY   48 (65)
Q Consensus        20 ~LP~~~yfGiSAaTG~l---sDnhDIis~~~~   48 (65)
                      .||+..|+|+||+||.+   .+.|+|++...-
T Consensus       201 ~l~e~v~VGFSAsTG~~~~~~~~h~IlsWsF~  232 (237)
T 1fny_A          201 VLPEWVRFGFSATTGIDKGYVQTNDVLSWSFE  232 (237)
T ss_dssp             HSCSEEEEEEEEEECSSTTCCCCCEEEEEEEE
T ss_pred             hCCCcEEEEEEEeeCCCCcccceeEEEEEEEE
Confidence            37888899999999999   999999998653

>1dbn_A MAL, protein (leukoagglutinin); plant lectin, carbohydrate binding, sialyllactose, sugar BIN protein; HET: NAG SIA GAL BGC; 2.75A {Maackia amurensis} SCOP: b.29.1.1

Probab=97.42  E-value=7.4e-05  Score=51.63  Aligned_cols=28  Identities=43%  Similarity=0.439  Sum_probs=25.4

Q ss_pred             ecCCCCeEEEeecCCCC--CCCeeeEEEEE
Q psy7201          20 KLPTGYYFGVSAATGDL--SDNHDVLGIRT   47 (65)
Q Consensus        20 ~LP~~~yfGiSAaTG~l--sDnhDIis~~~   47 (65)
                      .||+..|+|+||+||.+  .+.|+|++...
T Consensus       206 ~l~e~v~VGFSAsTG~~~~~~~h~IlsWsF  235 (239)
T 1dbn_A          206 ILPEWVRVGFSAATGYPTEVETHDVLSWSF  235 (239)
T ss_dssp             HSCSEEEEEEEEEECSGGGCCCCEEEEEEE
T ss_pred             hCCccEEEEEEeccCCCccceeeEEEEEEe
Confidence            37888899999999999  99999999865

>1gzc_A Erythrina crista-galli lectin; carbohydrate, sugar binding protein, saccharide, protein-carbohydrate interactions, lactose, glycoprotein; HET: LAT; 1.58A {Erythrina crista-galli} SCOP: b.29.1.1 PDB: 1gz9_A* 1fyu_A* 1ax0_A* 1ax1_A* 1ax2_A* 1axy_A* 1axz_A* 1lte_A* 1sfy_A* 1v00_A* 1uzz_A 1uzy_A* 3n35_A* 3n36_A* 3n3h_A*

Probab=97.36  E-value=0.00011  Score=50.78  Aligned_cols=29  Identities=34%  Similarity=0.411  Sum_probs=25.2

Q ss_pred             ecCCCCeEEEeecCCCC---CCCeeeEEEEEe
Q psy7201          20 KLPTGYYFGVSAATGDL---SDNHDVLGIRTY   48 (65)
Q Consensus        20 ~LP~~~yfGiSAaTG~l---sDnhDIis~~~~   48 (65)
                      .||+..|+|+||+||.+   .+.|+|++...-
T Consensus       203 ~l~e~v~VGFSAsTG~~~~~~~~h~IlsWsF~  234 (239)
T 1gzc_A          203 VLPDWVDVGLSGATGAQRDAAETHDVYSWSFQ  234 (239)
T ss_dssp             HSCSEEEEEEEEEECSSTTCCCCCEEEEEEEE
T ss_pred             hCCCceEEEEEeccCCCccccceEEEEEEEeE
Confidence            37888899999999986   899999998653

>2eig_A Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG binding protein; HET: NAG; 2.00A {Lotus tetragonolobus}

Probab=97.31  E-value=0.00014  Score=50.27  Aligned_cols=29  Identities=28%  Similarity=0.351  Sum_probs=25.4

Q ss_pred             ecCCCCeEEEeecC--CCCCCCeeeEEEEEee
Q psy7201          20 KLPTGYYFGVSAAT--GDLSDNHDVLGIRTYE   49 (65)
Q Consensus        20 ~LP~~~yfGiSAaT--G~lsDnhDIis~~~~~   49 (65)
                      .||...|+|+||+|  |.+ +.|+|++.....
T Consensus       195 ~l~e~v~VGFSAsT~~G~~-~~h~IlsWsF~s  225 (234)
T 2eig_A          195 VLPEKVSVGFSATTWNPER-ERHDIYSWSFTS  225 (234)
T ss_dssp             HSCSEEEEEEEEEECSSCC-EEEEEEEEEEEE
T ss_pred             hcCCceEEEEEeeecCCCc-ceeEEEEEEEEe
Confidence            37888899999999  999 999999987644

>1wbf_A Protein (agglutinin); lectin (agglutinin), legume lectin, protein crystallography, group specificity, saccharide free form; HET: NAG; 2.30A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 2d3s_A* 2dtw_A* 1wbl_A* 2dty_A* 2du0_A* 2du1_A* 2e51_A* 2e53_A* 2zmk_A* 2zml_A* 2zmn_A* 2e7t_A* 2e7q_A*

Probab=97.13  E-value=0.00029  Score=48.80  Aligned_cols=30  Identities=37%  Similarity=0.515  Sum_probs=26.4

Q ss_pred             ecCCCCeEEEeecC----CCC---CCCeeeEEEEEee
Q psy7201          20 KLPTGYYFGVSAAT----GDL---SDNHDVLGIRTYE   49 (65)
Q Consensus        20 ~LP~~~yfGiSAaT----G~l---sDnhDIis~~~~~   49 (65)
                      .||+..|+|+||+|    |.+   .+.|+|++.....
T Consensus       198 ~l~e~v~VGFSAsTg~~~G~~~~~~~~h~IlsWsF~s  234 (242)
T 1wbf_A          198 VLPESVNVGFSAATGDPSGKQRNATETHDILSWSFSA  234 (242)
T ss_dssp             HSCSEEEEEEEEEECCGGGCCTTCCCCCEEEEEEEEE
T ss_pred             hcCCceEEEEEEeecCcCCccccccceEEEEEEEeEe
Confidence            47888899999999    999   9999999987644

>3zyr_A Lectin; sugar binding protein, N-glycan; HET: NAG BMA MAN GOL; 1.65A {Platypodium elegans} SCOP: b.29.1.1 PDB: 3zvx_A* 1ukg_A* 1q8o_A* 1q8q_A* 1q8s_A* 1q8v_A* 1q8p_A* 2auy_A* 2gme_A 2gmm_A* 2gmp_A* 2gn3_A* 2gn7_A* 2gnb_A* 2gnd_A* 2gnm_A* 2gnt_A 2phf_A* 2phr_A* 2pht_A* ...

Probab=97.11  E-value=0.00025  Score=50.01  Aligned_cols=32  Identities=25%  Similarity=0.270  Sum_probs=27.4

Q ss_pred             cCCCCeEEEeecCCCCCCCeeeEEEEEeeecC
Q psy7201          21 LPTGYYFGVSAATGDLSDNHDVLGIRTYELEF   52 (65)
Q Consensus        21 LP~~~yfGiSAaTG~lsDnhDIis~~~~~l~~   52 (65)
                      ||+..|+|+||+||.+.+.|+|++...-.-..
T Consensus       216 l~e~v~VGFSAsTG~~~e~h~IlsWsF~s~l~  247 (261)
T 3zyr_A          216 LPEWVRVGFSAASGEQFQTHNLESWSFTSTLL  247 (261)
T ss_dssp             SCSEEEEEEEEEESSSCCEEEEEEEEEEEEEC
T ss_pred             CcCcEEEEEEecCCCccceEEEEEEEEEEEcC
Confidence            78888999999999999999999987655433

>1nls_A Concanavalin A; lectin, agglutinin; 0.94A {Canavalia ensiformis} SCOP: b.29.1.1 PDB: 1bxh_A* 1apn_A 1ces_A 1cjp_A* 1c57_A 1cvn_A* 1con_A 1dq1_A 1dq2_A 1dq4_A 1dq5_A 1dq6_A 1enq_A 1enr_A 1ens_A 1gic_A* 1dq0_A 1hqw_A 1gkb_A* 1i3h_A ...

Probab=97.04  E-value=0.00046  Score=47.83  Aligned_cols=28  Identities=29%  Similarity=0.356  Sum_probs=24.9

Q ss_pred             cCCCCeEEEeecCCCCCCCeeeEEEEEe
Q psy7201          21 LPTGYYFGVSAATGDLSDNHDVLGIRTY   48 (65)
Q Consensus        21 LP~~~yfGiSAaTG~lsDnhDIis~~~~   48 (65)
                      ||+-.|+|+||+||...+.|+|++...-
T Consensus        85 l~e~~~VGFSAsTG~~~~~h~IlsWsF~  112 (237)
T 1nls_A           85 LPEWVRVGLSASTGLYKETNTILSWSFT  112 (237)
T ss_dssp             SCSEEEEEEEEECSSSCCCCEEEEEEEE
T ss_pred             CccccEEEEEeccCCcceeeeeEEEEEE
Confidence            6777899999999999999999998653

>1fx5_A UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HOMO-dimer, fucose specific lectin, SUG binding protein; HET: NAG FUC BMA MAN; 2.20A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1jxn_A*

Probab=97.01  E-value=0.00032  Score=48.60  Aligned_cols=39  Identities=26%  Similarity=0.156  Sum_probs=29.3

Q ss_pred             cccceeecc-eecCCCCeEEEeecC--CCCCCCeeeEEEEEee
Q psy7201          10 WKECFKVSG-VKLPTGYYFGVSAAT--GDLSDNHDVLGIRTYE   49 (65)
Q Consensus        10 w~~Cf~~~~-v~LP~~~yfGiSAaT--G~lsDnhDIis~~~~~   49 (65)
                      +..|..+.- -.||+..|+|+||+|  |.+ +.|+|++.....
T Consensus       194 ~~ls~~vdL~~~l~e~v~VGFSAsT~~G~~-~~h~IlsWsF~s  235 (242)
T 1fx5_A          194 ISVTSIVDLKEILPEWVSVGFSGSTYIGRQ-ATHEVLNWYFTS  235 (242)
T ss_dssp             EEEEEECCGGGTSCSEEEEEEEEEEETTSC-EEEEEEEEEEEE
T ss_pred             ceeeEEechHHhCCccEEEEEEecccCCCc-ceeEEEEEEeEe
Confidence            455554321 137888899999999  999 999999987644

>3ipv_A Lectin alpha chain; galactose binding, SEED lectin, hemagglutinin, legume lectin fungal, sugar binding protein; 2.04A {Spatholobus parviflorus} PDB: 3ipv_B 3usu_B* 3usu_A*

Probab=96.90  E-value=0.0004  Score=48.59  Aligned_cols=31  Identities=35%  Similarity=0.344  Sum_probs=26.6

Q ss_pred             cCCCCeEEEeecCCCC---CCCeeeEEEEEeeec
Q psy7201          21 LPTGYYFGVSAATGDL---SDNHDVLGIRTYELE   51 (65)
Q Consensus        21 LP~~~yfGiSAaTG~l---sDnhDIis~~~~~l~   51 (65)
                      ||+--|+|+||+||..   .+.|+|++...-.-.
T Consensus       204 l~e~v~VGFSAsTG~~~~~~e~h~IlsWsF~s~l  237 (251)
T 3ipv_A          204 LPEWVRVGFSAATGASGGKIETHDVFSWSFASKL  237 (251)
T ss_dssp             SCSEEEEEEEEEECSSTTCCCCCEEEEEEEEEEE
T ss_pred             CCCcEEEEEEEecCCCccccceeEEEEEEEEEEC
Confidence            7888899999999999   999999998765433

>3ujo_A Legume lectin; carbohydrate-binding, galactose, adenine binding protein; HET: ADE GAL; 2.00A {Dolichos lablab} PDB: 3ujq_A* 3uk9_A* 3ul2_A* 1fat_A* 1g8w_A*

Probab=96.65  E-value=0.0022  Score=45.71  Aligned_cols=31  Identities=29%  Similarity=0.264  Sum_probs=25.8

Q ss_pred             cCCCCeEEEeecCCC---CCCCeeeEEEEEeeec
Q psy7201          21 LPTGYYFGVSAATGD---LSDNHDVLGIRTYELE   51 (65)
Q Consensus        21 LP~~~yfGiSAaTG~---lsDnhDIis~~~~~l~   51 (65)
                      ||+--|+|+||+||.   ..+.|+|++...-.-.
T Consensus       223 L~e~v~VGFSAsTG~~~~~~e~H~IlsWSFss~l  256 (281)
T 3ujo_A          223 LPEWVSVGFSATTGLSKGYVETNEVLSWSFASKL  256 (281)
T ss_dssp             SCSEEEEEEEEEECSSTTSCCCCEEEEEEEEEEE
T ss_pred             ccCcEEEEEEeecCCCCcccceeEEEEEEEEEEc
Confidence            677779999999996   6899999998765543

>1v6i_A Agglutinin, PNA, galactose-binding lectin; open quaternary association, orthorhombic, carbohydrate specificity, protein crystallography; HET: GAL GLC; 2.15A {Arachis hypogaea} SCOP: b.29.1.1 PDB: 1bzw_A* 1v6j_A* 1v6k_A* 1v6l_A* 1v6m_A 1v6n_A 1v6o_A 2dva_A* 1cq9_A 1ciw_A* 1qf3_A* 1rir_A* 1rit_A* 2dh1_A 1cr7_A* 2dv9_A* 2dvb_A* 2dvd_A* 2dvf_A 2dvg_A* ...

Probab=96.11  E-value=0.0037  Score=42.97  Aligned_cols=29  Identities=34%  Similarity=0.423  Sum_probs=24.7

Q ss_pred             ecCCCCeEEEeecCCCC--CCCeeeEEEEEee
Q psy7201          20 KLPTGYYFGVSAATGDL--SDNHDVLGIRTYE   49 (65)
Q Consensus        20 ~LP~~~yfGiSAaTG~l--sDnhDIis~~~~~   49 (65)
                      .||+..|+|+| +||.+  .+.|+|++.....
T Consensus       197 ~l~e~v~VGFS-sTG~~~~~~~h~IlsWsF~s  227 (232)
T 1v6i_A          197 KLPERVKFGFS-ASGSLGGRQIHLIRSWSFTS  227 (232)
T ss_dssp             HSCSEEEEEEE-EECCSSBCCEEEEEEEEEEE
T ss_pred             hCCccEEEEEE-ecCCCccccEEEEEEEEEEe
Confidence            37888899999 99995  9999999987643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	65
d2a6va1	218	b.29.1.13 (A:9-226) Emp46p N-terminal domain {Bake	8e-16
d2a6za1	221	b.29.1.13 (A:7-227) Emp47p N-terminal domain {Bake	1e-14
d1gv9a_	228	b.29.1.13 (A:) Carbohydrate-recognition domain of	2e-13
d1ukga_	241	b.29.1.1 (A:) Legume lectin {Bloodwood tree (Ptero	1e-06
g1qmo.1	230	b.29.1.1 (A:,E:) Legume lectin {Field bean (Dolich	2e-06
g2ltn.1	229	b.29.1.1 (A:,B:) Legume lectin {Garden pea (Pisum	4e-06
d1dhkb_	204	b.29.1.1 (B:) Phytohemagglutinin-L, PHA-L, also ar	5e-05
d1g8wa_	233	b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also ar	2e-04
d1avba_	226	b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also ar	2e-04
d1n47a_	233	b.29.1.1 (A:) Legume lectin {Hairy vetch (Vicia vi	2e-04
d1g7ya_	253	b.29.1.1 (A:) Legume lectin {Horse gram (Dolichos	4e-04
d1dbna_	239	b.29.1.1 (A:) Legume lectin {Maackia amurensis, le	4e-04
d1fnya_	237	b.29.1.1 (A:) Legume lectin {Black locust (Robinia	5e-04
d1g9fa_	251	b.29.1.1 (A:) Legume lectin {Soybean (Glycine max)	0.001
d1ioaa_	228	b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also ar	0.001
d1v6ia_	232	b.29.1.1 (A:) Legume lectin {Peanut (Arachis hypog	0.002
d1nlsa_	237	b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia	0.002

>d2a6va1 b.29.1.13 (A:9-226) Emp46p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 218

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Lectin leg-like
domain: Emp46p N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 65.8 bits (160), Expect = 8e-16
 Identities = 9/52 (17%), Positives = 22/52 (42%), Gaps = 2/52 (3%)

Query: 1   STDFENKAAWKECFKVSGVKLPTG--YYFGVSAATGDLSDNHDVLGIRTYEL 50
           +   + +   + CF+   VK      +  G SA      ++ ++L ++ Y+ 
Sbjct: 164 NHLLKLQMDNRVCFQTRKVKFMGSSPFRIGTSAINDASKESFEILKMKLYDG 215

>d2a6za1 b.29.1.13 (A:7-227) Emp47p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 221

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Lectin leg-like
domain: Emp47p N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 62.3 bits (151), Expect = 1e-14
 Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 4   FENKAAWKECFKVSGVKLPTG-YYFGVSAATGDLSDNHDVLGIRTYEL 50
            + +   K CF+   V+ P+G Y  GV+A  G +++N +   I   + 
Sbjct: 170 LKVQVDNKVCFQTRKVRFPSGSYRIGVTAQNGAVNNNAESFEIFKMQF 217

>d1gv9a_ b.29.1.13 (A:) Carbohydrate-recognition domain of P58/ERGIC-53 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 228

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Lectin leg-like
domain: Carbohydrate-recognition domain of P58/ERGIC-53
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 59.4 bits (143), Expect = 2e-13
 Identities = 21/45 (46%), Positives = 32/45 (71%)

Query: 6   NKAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYEL 50
           +K  ++ C KV  + +PT  +FG+SAATG L+D+HDVL   T++L
Sbjct: 182 DKNDYEFCAKVENMVIPTQGHFGISAATGGLADDHDVLSFLTFQL 226

>d1ukga_ b.29.1.1 (A:) Legume lectin {Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]} Length = 241

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]

 Score = 41.3 bits (96), Expect = 1e-06
 Identities = 9/45 (20%), Positives = 18/45 (40%), Gaps = 1/45 (2%)

Query: 1   STDFENKAAWKECFKVSGVK-LPTGYYFGVSAATGDLSDNHDVLG 44
              + +   ++  ++V     LP     G SAA+G+    H +  
Sbjct: 186 VATYSDGTRYEVSYEVDVRSVLPEWVRVGFSAASGEQYQTHTLES 230

>d1dhkb_ b.29.1.1 (B:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 204

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

 Score = 36.6 bits (84), Expect = 5e-05
 Identities = 8/27 (29%), Positives = 11/27 (40%), Gaps = 3/27 (11%)

Query: 21  LPTGYYFGVSAATGDLSDN---HDVLG 44
           +      G SA +G    +   HDVL 
Sbjct: 171 VYDWVSVGFSATSGAYQWSYETHDVLS 197

>d1g8wa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 233

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

 Score = 35.1 bits (80), Expect = 2e-04
 Identities = 11/27 (40%), Positives = 12/27 (44%), Gaps = 3/27 (11%)

Query: 21  LPTGYYFGVSAATGDLSDN---HDVLG 44
           LP     G SA TG    N   +DVL 
Sbjct: 199 LPEWVSVGFSATTGINKGNVETNDVLS 225

>d1avba_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 226

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

 Score = 35.1 bits (80), Expect = 2e-04
 Identities = 7/27 (25%), Positives = 11/27 (40%), Gaps = 3/27 (11%)

Query: 21  LPTGYYFGVSAATGDLSDN---HDVLG 44
           +      G SA +G   +    H+VL 
Sbjct: 192 VEDWVSVGFSATSGSKKETTETHNVLS 218

>d1n47a_ b.29.1.1 (A:) Legume lectin {Hairy vetch (Vicia villosa), isolectin b4 [TaxId: 3911]} Length = 233

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Hairy vetch (Vicia villosa), isolectin b4 [TaxId: 3911]

 Score = 34.7 bits (79), Expect = 2e-04
 Identities = 9/27 (33%), Positives = 13/27 (48%), Gaps = 3/27 (11%)

Query: 21  LPTGYYFGVSAATG---DLSDNHDVLG 44
           LP     G SA TG    + + HD++ 
Sbjct: 199 LPEYVRVGFSATTGLNAGVVETHDIVS 225

>d1g7ya_ b.29.1.1 (A:) Legume lectin {Horse gram (Dolichos biflorus), different isoforms [TaxId: 3840]} Length = 253

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Horse gram (Dolichos biflorus), different isoforms [TaxId: 3840]

 Score = 33.9 bits (77), Expect = 4e-04
 Identities = 11/27 (40%), Positives = 13/27 (48%), Gaps = 3/27 (11%)

Query: 21  LPTGYYFGVSAATG---DLSDNHDVLG 44
           LP     G SA TG     ++ HDVL 
Sbjct: 200 LPEYVSIGFSATTGLSEGYTETHDVLS 226

>d1dbna_ b.29.1.1 (A:) Legume lectin {Maackia amurensis, leukoagglutinin [TaxId: 37501]} Length = 239

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Maackia amurensis, leukoagglutinin [TaxId: 37501]

 Score = 34.0 bits (77), Expect = 4e-04
 Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 2/26 (7%)

Query: 21  LPTGYYFGVSAATGDLSD--NHDVLG 44
           LP     G SAATG  ++   HDVL 
Sbjct: 207 LPEWVRVGFSAATGYPTEVETHDVLS 232

>d1fnya_ b.29.1.1 (A:) Legume lectin {Black locust (Robinia pseudoacacia) [TaxId: 35938]} Length = 237

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Black locust (Robinia pseudoacacia) [TaxId: 35938]

 Score = 34.0 bits (77), Expect = 5e-04
 Identities = 11/27 (40%), Positives = 12/27 (44%), Gaps = 3/27 (11%)

Query: 21  LPTGYYFGVSAATGDLSD---NHDVLG 44
           LP    FG SA TG        +DVL 
Sbjct: 202 LPEWVRFGFSATTGIDKGYVQTNDVLS 228

>d1g9fa_ b.29.1.1 (A:) Legume lectin {Soybean (Glycine max) [TaxId: 3847]} Length = 251

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Soybean (Glycine max) [TaxId: 3847]

 Score = 32.8 bits (74), Expect = 0.001
 Identities = 12/26 (46%), Positives = 12/26 (46%), Gaps = 2/26 (7%)

Query: 21  LPTGYYFGVSAATGDLSDN--HDVLG 44
           LP     G SAATG       HDVL 
Sbjct: 200 LPEWVRIGFSAATGLDIPGESHDVLS 225

>d1ioaa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris), G02771, arcelin-5a [TaxId: 3885]} Length = 228

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris), G02771, arcelin-5a [TaxId: 3885]

 Score = 32.8 bits (74), Expect = 0.001
 Identities = 8/27 (29%), Positives = 10/27 (37%), Gaps = 3/27 (11%)

Query: 21  LPTGYYFGVSAATGDLSDN---HDVLG 44
           +      G S  +G   D    HDVL 
Sbjct: 194 VDEWVSVGFSPTSGLTEDTTETHDVLS 220

>d1v6ia_ b.29.1.1 (A:) Legume lectin {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 232

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Peanut (Arachis hypogaea) [TaxId: 3818]

 Score = 32.4 bits (73), Expect = 0.002
 Identities = 7/25 (28%), Positives = 9/25 (36%), Gaps = 1/25 (4%)

Query: 21  LPTGYYFGVSAATGDLS-DNHDVLG 44
           LP    FG SA+        H +  
Sbjct: 198 LPERVKFGFSASGSLGGRQIHLIRS 222

>d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]} Length = 237

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Concanavalin A
species: Jack bean (Canavalia ensiformis) [TaxId: 3823]

 Score = 31.8 bits (72), Expect = 0.002
 Identities = 8/45 (17%), Positives = 18/45 (40%), Gaps = 1/45 (2%)

Query: 21  LPTGYYFGVSAATGDLSDNHDVLGIRTYELEFPGEKLSKGPFINL 65
           LP     G+SA+TG   + + +L    +  +       +   ++ 
Sbjct: 85  LPEWVRVGLSASTGLYKETNTILSWS-FTSKLKSNSTHETNALHF 128

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	65
d2a6va1	218	Emp46p N-terminal domain {Baker's yeast (Saccharom	99.55
d1gv9a_	228	Carbohydrate-recognition domain of P58/ERGIC-53 {R	99.32
d2a6za1	221	Emp47p N-terminal domain {Baker's yeast (Saccharom	99.29
d1ukga_	241	Legume lectin {Bloodwood tree (Pterocarpus angolen	98.54
g2ltn.1	229	Legume lectin {Garden pea (Pisum sativum) [TaxId:	98.42
d1v6ia_	232	Legume lectin {Peanut (Arachis hypogaea) [TaxId: 3	98.36
g1qmo.1	230	Legume lectin {Field bean (Dolichos lablab), Fril	98.34
d1g7ya_	253	Legume lectin {Horse gram (Dolichos biflorus), dif	98.31
d1dhkb_	204	Phytohemagglutinin-L, PHA-L, also arcelin {Kidney	98.16
d1avba_	226	Phytohemagglutinin-L, PHA-L, also arcelin {Kidney	98.13
d1fnya_	237	Legume lectin {Black locust (Robinia pseudoacacia)	98.06
d1g9fa_	251	Legume lectin {Soybean (Glycine max) [TaxId: 3847]	98.02
d1n47a_	233	Legume lectin {Hairy vetch (Vicia villosa), isolec	97.97
d1g8wa_	233	Phytohemagglutinin-L, PHA-L, also arcelin {Kidney	97.91
d1ioaa_	228	Phytohemagglutinin-L, PHA-L, also arcelin {Kidney	97.74
d1dbna_	239	Legume lectin {Maackia amurensis, leukoagglutinin	97.57
d1gzca_	239	Legume lectin {Cockspur coral tree (Erythrina cris	97.36
d1nlsa_	237	Concanavalin A {Jack bean (Canavalia ensiformis) [	97.1
d1hqla_	236	Legume lectin {Griffonia simplicifolia, lectin I-b	96.85
d1qnwa_	237	Legume lectin {Furze (Ulex europaeus), UEA-II [Tax	96.83
d2d3sa1	237	Legume lectin {Winged bean (Psophocarpus tetragono	96.83
d1leda_	243	Legume lectin {West-central african legume (Griffo	96.68
d1fx5a_	240	Legume lectin {Furze (Ulex europaeus), UEA-I [TaxI	96.35
d1f9ka_	234	Legume lectin {Winged bean (Psophocarpus tetragono	96.17
d1b77a2	118	gp45 sliding clamp {Bacteriophage RB69 [TaxId: 123	81.76

>d2a6va1 b.29.1.13 (A:9-226) Emp46p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Lectin leg-like
domain: Emp46p N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.55  E-value=1.2e-15  Score=102.00  Aligned_cols=44  Identities=20%  Similarity=0.421  Sum_probs=40.4

Q ss_pred             ccccceeecceecCCC--CeEEEeecCCCCCCCeeeEEEEEeeecC
Q psy7201           9 AWKECFKVSGVKLPTG--YYFGVSAATGDLSDNHDVLGIRTYELEF   52 (65)
Q Consensus         9 ~w~~Cf~~~~v~LP~~--~yfGiSAaTG~lsDnhDIis~~~~~l~~   52 (65)
                      +|+.||++.+|.||.+  +||||||+||+++|+|||++|++|+..+
T Consensus       172 d~~~c~~t~~i~lp~~~~~yfG~SA~Tg~~~d~~dIls~~~~~~~~  217 (218)
T d2a6va1         172 DNRVCFQTRKVKFMGSSPFRIGTSAINDASKESFEILKMKLYDGVI  217 (218)
T ss_dssp             TTEEEEEESCCCGGGTSCBEEEEEEECCTTCCEEEEEEEEEESSCC
T ss_pred             CCcEEEEECCeecCCCCcEEEEEEECCCCCcCcEEEEEEEEEeccc
Confidence            3699999999999986  6899999999999999999999998765

>d1gv9a_ b.29.1.13 (A:) Carbohydrate-recognition domain of P58/ERGIC-53 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Lectin leg-like
domain: Carbohydrate-recognition domain of P58/ERGIC-53
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.32  E-value=8.9e-13  Score=85.73  Aligned_cols=45  Identities=47%  Similarity=0.751  Sum_probs=42.4

Q ss_pred             ccccccceeecceecCCCCeEEEeecCCCCCCCeeeEEEEEeeec
Q psy7201           7 KAAWKECFKVSGVKLPTGYYFGVSAATGDLSDNHDVLGIRTYELE   51 (65)
Q Consensus         7 ~~~w~~Cf~~~~v~LP~~~yfGiSAaTG~lsDnhDIis~~~~~l~   51 (65)
                      ...|..|+++.++.||...||||||+||+++++|||+||++|+|.
T Consensus       183 ~~~~~~~~~~~~~~l~~~~y~GFTAsTG~~~~~H~I~s~~~~~l~  227 (228)
T d1gv9a_         183 KNDYEFCAKVENMVIPTQGHFGISAATGGLADDHDVLSFLTFQLT  227 (228)
T ss_dssp             TTCCEEEEEETTCCCCSSBEEEEEEECCSSCCEEEEEEEEEEEEE
T ss_pred             CcceeEEEEecccccCCCEEEEEEEeCCCCcCeEEEEEEEEEEcc
Confidence            466889999999999999999999999999999999999999986

>d2a6za1 b.29.1.13 (A:7-227) Emp47p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Lectin leg-like
domain: Emp47p N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.29  E-value=7.7e-13  Score=87.79  Aligned_cols=42  Identities=29%  Similarity=0.579  Sum_probs=34.5

Q ss_pred             ccccceeecceecCCCC-eEEEeecCCCCCCCeeeEEEEEeee
Q psy7201           9 AWKECFKVSGVKLPTGY-YFGVSAATGDLSDNHDVLGIRTYEL   50 (65)
Q Consensus         9 ~w~~Cf~~~~v~LP~~~-yfGiSAaTG~lsDnhDIis~~~~~l   50 (65)
                      +|+.||++.++.||.+. ||||||+||+++++||++++..+++
T Consensus       175 d~~~c~~~~~v~lp~~~~~fG~SA~TG~~~~~hd~~~i~~~~~  217 (221)
T d2a6za1         175 DNKVCFQTRKVRFPSGSYRIGVTAQNGAVNNNAESFEIFKMQF  217 (221)
T ss_dssp             TTEEEEEESCCCCCSSEEEEEEEEECCSGGGCCCEEEEEEEEE
T ss_pred             cCcEeEEECCeecCCCCEEEEEEEccCCccCCCceEEEEEEEe
Confidence            35999999999999975 6999999999999999554444443

>d1ukga_ b.29.1.1 (A:) Legume lectin {Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]

Probab=98.54  E-value=1.9e-08  Score=66.44  Aligned_cols=46  Identities=20%  Similarity=0.306  Sum_probs=38.0

Q ss_pred             cccccccccccceeecce-ecCCCCeEEEeecCCCCCCCeeeEEEEE
Q psy7201           2 TDFENKAAWKECFKVSGV-KLPTGYYFGVSAATGDLSDNHDVLGIRT   47 (65)
Q Consensus         2 ~di~~~~~w~~Cf~~~~v-~LP~~~yfGiSAaTG~lsDnhDIis~~~   47 (65)
                      ++.++...|..|+.+.-. .||...|+|+||+||++.++|||++...
T Consensus       187 ~~~~~~~~~~l~~~vdL~~~l~~~~yvGFSAsTG~~~~~H~IlsWsF  233 (241)
T d1ukga_         187 ATYSDGTRYEVSYEVDVRSVLPEWVRVGFSAASGEQYQTHTLESWSF  233 (241)
T ss_dssp             EEETTCCEEEEEEECCGGGTSCSEEEEEEEEEESSSCCEEEEEEEEE
T ss_pred             EccCCCCceEEEEEEehHHhCCCcEEEEEEEecCCCCceeEEEEeEE
Confidence            345567788999997432 3888899999999999999999999964

>d1v6ia_ b.29.1.1 (A:) Legume lectin {Peanut (Arachis hypogaea) [TaxId: 3818]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Peanut (Arachis hypogaea) [TaxId: 3818]

Probab=98.36  E-value=8.7e-08  Score=63.29  Aligned_cols=47  Identities=21%  Similarity=0.080  Sum_probs=36.8

Q ss_pred             ccccccccccceeec-ceecCCCCeEEEeecCCCCC-CCeeeEEEEEee
Q psy7201           3 DFENKAAWKECFKVS-GVKLPTGYYFGVSAATGDLS-DNHDVLGIRTYE   49 (65)
Q Consensus         3 di~~~~~w~~Cf~~~-~v~LP~~~yfGiSAaTG~ls-DnhDIis~~~~~   49 (65)
                      +..+...|..|+.+. ...||+..|||+||+||+++ +.|||++.....
T Consensus       179 ~~~~~~~~~l~~~vdL~~~l~~~vyvGFSAsTG~~~~~~H~I~sWsFss  227 (232)
T d1v6ia_         179 TNDNGDITTIAQVVDLKAKLPERVKFGFSASGSLGGRQIHLIRSWSFTS  227 (232)
T ss_dssp             ECTTSCEEEEEEECCHHHHSCSEEEEEEEEECCSSBCCEEEEEEEEEEE
T ss_pred             ecCCCCcceEEEEEchhhccCCcEEEEEEEECCCCCCcccEEEEeEeEE
Confidence            344566777888874 33589999999999999986 789999987543

>d1g7ya_ b.29.1.1 (A:) Legume lectin {Horse gram (Dolichos biflorus), different isoforms [TaxId: 3840]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Horse gram (Dolichos biflorus), different isoforms [TaxId: 3840]

Probab=98.31  E-value=4.2e-07  Score=60.66  Aligned_cols=27  Identities=41%  Similarity=0.564  Sum_probs=24.4

Q ss_pred             cCCCCeEEEeecCC---CCCCCeeeEEEEE
Q psy7201          21 LPTGYYFGVSAATG---DLSDNHDVLGIRT   47 (65)
Q Consensus        21 LP~~~yfGiSAaTG---~lsDnhDIis~~~   47 (65)
                      ||...|+|+||+||   +++++|||++...
T Consensus       200 l~~~~yvGFSAsTG~~~~~~~~H~IlsWsF  229 (253)
T d1g7ya_         200 LPEYVSIGFSATTGLSEGYTETHDVLSWSF  229 (253)
T ss_dssp             SCSEEEEEEEEECCSSSSCCCCCEEEEEEE
T ss_pred             CCCcEEEEEEeEcCCCCCcccccEEEEEEe
Confidence            78888999999999   7899999998764

>d1dhkb_ b.29.1.1 (B:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

Probab=98.16  E-value=4.6e-07  Score=58.46  Aligned_cols=27  Identities=30%  Similarity=0.270  Sum_probs=23.9

Q ss_pred             cCCCCeEEEeecCCCCCCC---eeeEEEEE
Q psy7201          21 LPTGYYFGVSAATGDLSDN---HDVLGIRT   47 (65)
Q Consensus        21 LP~~~yfGiSAaTG~lsDn---hDIis~~~   47 (65)
                      ||...|||+||+||+++++   |||++...
T Consensus       171 l~~~~yvGFSAaTG~~~~~~e~H~IlsWsF  200 (204)
T d1dhkb_         171 VYDWVSVGFSATSGAYQWSYETHDVLSWSF  200 (204)
T ss_dssp             GGSEEEEEEEEEECSGGGSCCEEEEEEEEE
T ss_pred             cCCcEEEEEEeecCCCCCCceeeEEEEEEE
Confidence            8888899999999999877   99998764

>d1avba_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

Probab=98.13  E-value=4.9e-07  Score=58.89  Aligned_cols=27  Identities=26%  Similarity=0.346  Sum_probs=23.0

Q ss_pred             cCCCCeEEEeecCCCCCC---CeeeEEEEE
Q psy7201          21 LPTGYYFGVSAATGDLSD---NHDVLGIRT   47 (65)
Q Consensus        21 LP~~~yfGiSAaTG~lsD---nhDIis~~~   47 (65)
                      ||...|||+||+||++++   .|||+|...
T Consensus       192 l~~~~y~GFSAaTG~~s~~~~~H~IlsWsF  221 (226)
T d1avba_         192 VEDWVSVGFSATSGSKKETTETHNVLSWSF  221 (226)
T ss_dssp             SCSEEEEEEEEEECSSGGGCEEEEEEEEEE
T ss_pred             cCCcEEEEEEEEcCCCCCCeeeeEEEEEEe
Confidence            788899999999998766   499998764

>d1fnya_ b.29.1.1 (A:) Legume lectin {Black locust (Robinia pseudoacacia) [TaxId: 35938]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Black locust (Robinia pseudoacacia) [TaxId: 35938]

Probab=98.06  E-value=1.4e-06  Score=57.03  Aligned_cols=28  Identities=39%  Similarity=0.441  Sum_probs=23.1

Q ss_pred             ecCCCCeEEEeecCCC---CCCCeeeEEEEE
Q psy7201          20 KLPTGYYFGVSAATGD---LSDNHDVLGIRT   47 (65)
Q Consensus        20 ~LP~~~yfGiSAaTG~---lsDnhDIis~~~   47 (65)
                      .||...|||+||+||+   ..++|||++...
T Consensus       201 ~l~~~~yvGFSAsTG~~s~~~e~H~I~sWsF  231 (237)
T d1fnya_         201 VLPEWVRFGFSATTGIDKGYVQTNDVLSWSF  231 (237)
T ss_dssp             HSCSEEEEEEEEEECSSTTCCCCCEEEEEEE
T ss_pred             cCCCcEEEEEEEECCCCCCcccccEEEEeEe
Confidence            3788899999999994   556899998743

>d1g9fa_ b.29.1.1 (A:) Legume lectin {Soybean (Glycine max) [TaxId: 3847]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Soybean (Glycine max) [TaxId: 3847]

Probab=98.02  E-value=2.4e-06  Score=57.10  Aligned_cols=46  Identities=28%  Similarity=0.123  Sum_probs=32.5

Q ss_pred             cccccceeeccee----cCCCCeEEEeecCCCCCCC--eeeEEEEEeeecCC
Q psy7201           8 AAWKECFKVSGVK----LPTGYYFGVSAATGDLSDN--HDVLGIRTYELEFP   53 (65)
Q Consensus         8 ~~w~~Cf~~~~v~----LP~~~yfGiSAaTG~lsDn--hDIis~~~~~l~~~   53 (65)
                      +.+..|.-...|.    ||...|||+||+||+..++  |||++.....-.++
T Consensus       183 ~~~~~~~l~~~vdL~~~l~~~~yvGFSAsTG~~~~~~~h~I~sWsF~s~~~~  234 (251)
T d1g9fa_         183 SQRTSNILSDVVDLKTSLPEWVRIGFSAATGLDIPGESHDVLSWSFASNLPH  234 (251)
T ss_dssp             GGTEEEEEEEECCC-CCSCSEEEEEEEEEECSSSCCCEEEEEEEEEEEEECC
T ss_pred             CCCcceeEEEEecchhhCCCcEEEEEEeecCCCCCCceeEEEEeEeECCCCC
Confidence            3445555444454    4777899999999998754  99998887664433

>d1n47a_ b.29.1.1 (A:) Legume lectin {Hairy vetch (Vicia villosa), isolectin b4 [TaxId: 3911]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Hairy vetch (Vicia villosa), isolectin b4 [TaxId: 3911]

Probab=97.97  E-value=2.3e-06  Score=56.28  Aligned_cols=27  Identities=33%  Similarity=0.514  Sum_probs=23.8

Q ss_pred             cCCCCeEEEeecCC---CCCCCeeeEEEEE
Q psy7201          21 LPTGYYFGVSAATG---DLSDNHDVLGIRT   47 (65)
Q Consensus        21 LP~~~yfGiSAaTG---~lsDnhDIis~~~   47 (65)
                      ||...||||||+||   ++.++|||++...
T Consensus       199 l~~~vyvGFSAsTG~~~~~~~~H~I~sWsF  228 (233)
T d1n47a_         199 LPEYVRVGFSATTGLNAGVVETHDIVSWSF  228 (233)
T ss_dssp             SCSEEEEEEEEEECSSTTCCCCCEEEEEEE
T ss_pred             cCCcEEEEEEEecCCCCCcccccEEEEEEe
Confidence            78888999999999   6788999999754

>d1g8wa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

Probab=97.91  E-value=3.1e-06  Score=55.96  Aligned_cols=28  Identities=39%  Similarity=0.360  Sum_probs=24.3

Q ss_pred             cCCCCeEEEeecCCCCCCC---eeeEEEEEe
Q psy7201          21 LPTGYYFGVSAATGDLSDN---HDVLGIRTY   48 (65)
Q Consensus        21 LP~~~yfGiSAaTG~lsDn---hDIis~~~~   48 (65)
                      ||...|||+||+||+++++   |||++...-
T Consensus       199 l~~~~yvGFSAsTG~~~~~~~~h~I~sWsFs  229 (233)
T d1g8wa_         199 LPEWVSVGFSATTGINKGNVETNDVLSWSFA  229 (233)
T ss_dssp             SCSEEEEEEEEEECSSTTBCCCCEEEEEEEE
T ss_pred             CCCcEEEEEEEEcCCCCCCceeeEEEEEEEE
Confidence            7989999999999988776   999998743

>d1ioaa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris), G02771, arcelin-5a [TaxId: 3885]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris), G02771, arcelin-5a [TaxId: 3885]

Probab=97.74  E-value=9.3e-06  Score=52.82  Aligned_cols=27  Identities=30%  Similarity=0.327  Sum_probs=23.0

Q ss_pred             cCCCCeEEEeecCCCCCCC---eeeEEEEE
Q psy7201          21 LPTGYYFGVSAATGDLSDN---HDVLGIRT   47 (65)
Q Consensus        21 LP~~~yfGiSAaTG~lsDn---hDIis~~~   47 (65)
                      ||+..|+|+||+||++.+.   |||++...
T Consensus       194 l~~~vyvGFSAsTG~~~~~~~~h~I~sWsF  223 (228)
T d1ioaa_         194 VDEWVSVGFSPTSGLTEDTTETHDVLSWSF  223 (228)
T ss_dssp             SCSEEEEEEEEEECSSTTTCBCCEEEEEEE
T ss_pred             CCCcEEEEEEeecCCCCCCceEEEEEEEEe
Confidence            6888899999999977655   99999874

>d1dbna_ b.29.1.1 (A:) Legume lectin {Maackia amurensis, leukoagglutinin [TaxId: 37501]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Maackia amurensis, leukoagglutinin [TaxId: 37501]

Probab=97.57  E-value=1.6e-05  Score=51.91  Aligned_cols=27  Identities=44%  Similarity=0.512  Sum_probs=23.4

Q ss_pred             cCCCCeEEEeecCCCCC--CCeeeEEEEE
Q psy7201          21 LPTGYYFGVSAATGDLS--DNHDVLGIRT   47 (65)
Q Consensus        21 LP~~~yfGiSAaTG~ls--DnhDIis~~~   47 (65)
                      ||...|||+||+||+++  .+|||++...
T Consensus       207 l~~~vyvGFSAsTG~~~~~~~H~I~sWsF  235 (239)
T d1dbna_         207 LPEWVRVGFSAATGYPTEVETHDVLSWSF  235 (239)
T ss_dssp             SCSEEEEEEEEEECSGGGCCCCEEEEEEE
T ss_pred             cCCcEEEEEEEeCCCCCCcceeEEEEEEe
Confidence            78888999999999875  4799999764

>d1gzca_ b.29.1.1 (A:) Legume lectin {Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]

Probab=97.36  E-value=8e-05  Score=49.17  Aligned_cols=29  Identities=38%  Similarity=0.493  Sum_probs=24.6

Q ss_pred             cCCCCeEEEeecCC---CCCCCeeeEEEEEee
Q psy7201          21 LPTGYYFGVSAATG---DLSDNHDVLGIRTYE   49 (65)
Q Consensus        21 LP~~~yfGiSAaTG---~lsDnhDIis~~~~~   49 (65)
                      ||...|+|+||+||   ++.+.|+|++.....
T Consensus       204 l~~~vyvGFSAsTG~~~~~~~~H~V~sWsF~s  235 (239)
T d1gzca_         204 LPDWVDVGLSGATGAQRDAAETHDVYSWSFQA  235 (239)
T ss_dssp             SCSEEEEEEEEEECSSTTCCCCCEEEEEEEEE
T ss_pred             cCCcEEEEEEEEcCCCCCCceeeEEEEEEeEe
Confidence            68888999999999   578999999987543

>d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Concanavalin A
species: Jack bean (Canavalia ensiformis) [TaxId: 3823]

Probab=97.10  E-value=0.00022  Score=47.90  Aligned_cols=35  Identities=23%  Similarity=0.219  Sum_probs=28.3

Q ss_pred             cCCCCeEEEeecCCCCCCCeeeEEEEEeeecCCCC
Q psy7201          21 LPTGYYFGVSAATGDLSDNHDVLGIRTYELEFPGE   55 (65)
Q Consensus        21 LP~~~yfGiSAaTG~lsDnhDIis~~~~~l~~~~~   55 (65)
                      ||...|+|+||+||.....|+|++...-.-....+
T Consensus        85 l~~~vyvGFSAsTG~~~~~h~I~sWsFsS~~~~~s  119 (237)
T d1nlsa_          85 LPEWVRVGLSASTGLYKETNTILSWSFTSKLKSNS  119 (237)
T ss_dssp             SCSEEEEEEEEECSSSCCCCEEEEEEEEEEEEESS
T ss_pred             CCCcEEEEEEeecCCCccceEEEEEEEEeeccccc
Confidence            66778999999999999999999998665443333

>d1hqla_ b.29.1.1 (A:) Legume lectin {Griffonia simplicifolia, lectin I-b4 [TaxId: 3850]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Griffonia simplicifolia, lectin I-b4 [TaxId: 3850]

Probab=96.85  E-value=0.00035  Score=46.23  Aligned_cols=28  Identities=32%  Similarity=0.335  Sum_probs=23.5

Q ss_pred             cCCCCeEEEeecCCCC-CCCeeeEEEEEe
Q psy7201          21 LPTGYYFGVSAATGDL-SDNHDVLGIRTY   48 (65)
Q Consensus        21 LP~~~yfGiSAaTG~l-sDnhDIis~~~~   48 (65)
                      ||...|+|+||+||.. ..+|+|++....
T Consensus       205 l~~~v~vGFSasTG~~~~~~h~I~sWsF~  233 (236)
T d1hqla_         205 LPESVRVGISASTGNNQFLTVYILSWRFS  233 (236)
T ss_dssp             SCSEEEEEEEEECCSCCCEEEEEEEEEEE
T ss_pred             CCCcEEEEEEeECCCCCceEEEEEEeEeE
Confidence            7777899999999975 678999998743

>d1qnwa_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-II [TaxId: 3902]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Furze (Ulex europaeus), UEA-II [TaxId: 3902]

Probab=96.83  E-value=0.00027  Score=46.41  Aligned_cols=28  Identities=32%  Similarity=0.444  Sum_probs=24.0

Q ss_pred             cCCCCeEEEeecCCCCC--CCeeeEEEEEe
Q psy7201          21 LPTGYYFGVSAATGDLS--DNHDVLGIRTY   48 (65)
Q Consensus        21 LP~~~yfGiSAaTG~ls--DnhDIis~~~~   48 (65)
                      ||...|+|+||+||...  ..|+|++....
T Consensus       204 l~~~vyvGFSasTG~~~~~q~h~I~sWsF~  233 (237)
T d1qnwa_         204 LPEWVSVGFSGGVGNAAEFETHDVLSWYFT  233 (237)
T ss_dssp             SCSEEEEEEEEEESCGGGCBCCEEEEEEEE
T ss_pred             CCCcEEEEEEeECCCCCCccEeEEEEeEeE
Confidence            57788999999999875  68999998764

>d2d3sa1 b.29.1.1 (A:1-237) Legume lectin {Winged bean (Psophocarpus tetragonolobus), basic agglutinin [TaxId: 3891]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Winged bean (Psophocarpus tetragonolobus), basic agglutinin [TaxId: 3891]

Probab=96.83  E-value=0.00049  Score=45.24  Aligned_cols=28  Identities=43%  Similarity=0.627  Sum_probs=23.2

Q ss_pred             cCCCCeEEEeecCCC-------CCCCeeeEEEEEe
Q psy7201          21 LPTGYYFGVSAATGD-------LSDNHDVLGIRTY   48 (65)
Q Consensus        21 LP~~~yfGiSAaTG~-------lsDnhDIis~~~~   48 (65)
                      ||...|+|+||+||+       ..+.|+|++...-
T Consensus       198 l~~~vyvGFSasTG~~~~~~~~~~e~h~I~sWsFs  232 (237)
T d2d3sa1         198 LPESVNVGFSAATGDPSGKQRNATETHDILSWSFS  232 (237)
T ss_dssp             SCSEEEEEEEEEECCGGGCCTTCCCCCEEEEEEEE
T ss_pred             CCCcEEEEEEeECCCCccCccccceeeEEEEeEeE
Confidence            467779999999995       4689999998753

>d1leda_ b.29.1.1 (A:) Legume lectin {West-central african legume (Griffonia simplicifolia) [TaxId: 3850]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: West-central african legume (Griffonia simplicifolia) [TaxId: 3850]

Probab=96.68  E-value=0.0005  Score=45.66  Aligned_cols=28  Identities=25%  Similarity=0.409  Sum_probs=23.9

Q ss_pred             cCCCCeEEEeecCCCCCCCeeeEEEEEee
Q psy7201          21 LPTGYYFGVSAATGDLSDNHDVLGIRTYE   49 (65)
Q Consensus        21 LP~~~yfGiSAaTG~lsDnhDIis~~~~~   49 (65)
                      ||...|+|+||+|| .+..|+|++....+
T Consensus       209 l~~~vyvGFSAsTG-~~~~h~I~sWsF~s  236 (243)
T d1leda_         209 LPQKVRIGFSAGVG-YDEVTYILSWHFFS  236 (243)
T ss_dssp             SCSEEEEEEEEEEC-BSEEEEEEEEEEEE
T ss_pred             cCCcEEEEEEcccC-CcceeeEEEEEEEe
Confidence            78878999999999 57999999987544

>d1fx5a_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-I [TaxId: 3902]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Furze (Ulex europaeus), UEA-I [TaxId: 3902]

Probab=96.35  E-value=0.00074  Score=44.37  Aligned_cols=29  Identities=28%  Similarity=0.197  Sum_probs=24.0

Q ss_pred             cCCCCeEEEeecCCC-CCCCeeeEEEEEee
Q psy7201          21 LPTGYYFGVSAATGD-LSDNHDVLGIRTYE   49 (65)
Q Consensus        21 LP~~~yfGiSAaTG~-lsDnhDIis~~~~~   49 (65)
                      ||..-|+||||+||. ....|+|++.....
T Consensus       206 l~~~v~vGFSasTG~~~~~~H~I~sWsFss  235 (240)
T d1fx5a_         206 LPEWVSVGFSGSTYIGRQATHEVLNWYFTS  235 (240)
T ss_dssp             SCSEEEEEEEEEEETTSCEEEEEEEEEEEE
T ss_pred             CCCcEEEEEEeECCCCCCceEEEEEEEeEE
Confidence            666669999999995 67889999987654

>d1f9ka_ b.29.1.1 (A:) Legume lectin {Winged bean (Psophocarpus tetragonolobus), acidic lectin [TaxId: 3891]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Winged bean (Psophocarpus tetragonolobus), acidic lectin [TaxId: 3891]

Probab=96.17  E-value=0.0022  Score=41.87  Aligned_cols=28  Identities=25%  Similarity=0.452  Sum_probs=21.9

Q ss_pred             cCCC--CeEEEeecCCC---CCCCeeeEEEEEe
Q psy7201          21 LPTG--YYFGVSAATGD---LSDNHDVLGIRTY   48 (65)
Q Consensus        21 LP~~--~yfGiSAaTG~---lsDnhDIis~~~~   48 (65)
                      ||..  .|+|+||+||.   ..+.|+|++....
T Consensus       199 l~~~~~v~vGFSasTG~~~~~~~~h~I~sWsF~  231 (234)
T d1f9ka_         199 FPNSEWVNVGLSATTGYQKNAVETHEIISWSFT  231 (234)
T ss_dssp             STTCSEEEEEEEEEECSSTTCCCEEEEEEEEEE
T ss_pred             cCCCCEEEEEEEeecCCCCCceeeeEEEEEEeE
Confidence            6644  58999999994   4678999998754

>d1b77a2 d.131.1.2 (A:111-228) gp45 sliding clamp {Bacteriophage RB69 [TaxId: 12353]}

class: Alpha and beta proteins (a+b)
fold: DNA clamp
superfamily: DNA clamp
family: DNA polymerase processivity factor
domain: gp45 sliding clamp
species: Bacteriophage RB69 [TaxId: 12353]

Probab=81.76  E-value=0.47  Score=28.34  Aligned_cols=29  Identities=14%  Similarity=0.293  Sum_probs=22.6

Q ss_pred             ccccccccceeecceecCCCCe-EEEeecC
Q psy7201           5 ENKAAWKECFKVSGVKLPTGYY-FGVSAAT   33 (65)
Q Consensus         5 ~~~~~w~~Cf~~~~v~LP~~~y-fGiSAaT   33 (65)
                      ++...++.||++++++|-.|-| .-||+..
T Consensus        63 ~~~~~f~f~fkveNlKll~gdY~V~Is~ks   92 (118)
T d1b77a2          63 DGSNNFNFVINMANMKIQPGNYKVMLWGAG   92 (118)
T ss_dssp             CCSCCEEEEEEGGGCCCCSSCEEEEEEEET
T ss_pred             cCceeEEEEEEcceEEEccCceEEEEEecc
Confidence            3456799999999999777766 9887653