Psyllid ID: psy7234
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 164 | ||||||
| 383855632 | 702 | PREDICTED: head-specific guanylate cycla | 0.957 | 0.223 | 0.662 | 2e-58 | |
| 91080827 | 670 | PREDICTED: similar to soluble guanylyl c | 0.920 | 0.225 | 0.682 | 3e-58 | |
| 340715035 | 702 | PREDICTED: head-specific guanylate cycla | 0.957 | 0.223 | 0.656 | 9e-58 | |
| 350417179 | 702 | PREDICTED: head-specific guanylate cycla | 0.957 | 0.223 | 0.656 | 9e-58 | |
| 332025314 | 631 | Head-specific guanylate cyclase [Acromyr | 0.957 | 0.248 | 0.643 | 2e-57 | |
| 333033747 | 702 | soluble guanylyl cyclase alpha-1 subunit | 0.914 | 0.213 | 0.686 | 2e-57 | |
| 307210703 | 598 | Head-specific guanylate cyclase [Harpegn | 0.957 | 0.262 | 0.643 | 3e-57 | |
| 58585248 | 699 | soluble guanylyl cyclase alpha 1 subunit | 0.957 | 0.224 | 0.656 | 4e-57 | |
| 380019972 | 700 | PREDICTED: head-specific guanylate cycla | 0.957 | 0.224 | 0.656 | 4e-57 | |
| 307174201 | 553 | Head-specific guanylate cyclase [Campono | 0.957 | 0.283 | 0.643 | 5e-57 |
| >gi|383855632|ref|XP_003703314.1| PREDICTED: head-specific guanylate cyclase-like [Megachile rotundata] | Back alignment and taxonomy information |
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Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 104/157 (66%), Positives = 126/157 (80%)
Query: 4 PSSQSVLDLKIGVASFCKAFPWHFIVDRKLELVQLGAGYMRLFGRCLKHLGSSVNNYFEI 63
P S DL++GVASFCKAFPWHF+VDR+LELVQLG G+MR+FG L LG ++ YF
Sbjct: 279 PLSTEATDLRMGVASFCKAFPWHFVVDRQLELVQLGVGFMRIFGHHLNRLGREISTYFAF 338
Query: 64 RRPNLLTVTFSSILKRVNSPFVIAIRLPQSLQNSPVEGLEFKGQMVYCPESESLLFVASP 123
RP+ +T+TF ILKR N+PFV+ ++ PQ + P EGLE KGQMV+CPES+S+LFV+SP
Sbjct: 339 TRPSGVTLTFHEILKRANTPFVLTLQRPQGVDKYPAEGLEMKGQMVHCPESDSILFVSSP 398
Query: 124 FLDALDNLTSRGLFISDIPLHDATRDVILVGEQARAQ 160
FL+ L+ LT RGLFISDIPLHDATRDVILVGEQARAQ
Sbjct: 399 FLNGLEGLTGRGLFISDIPLHDATRDVILVGEQARAQ 435
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Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|91080827|ref|XP_970511.1| PREDICTED: similar to soluble guanylyl cyclase alpha-1 subunit [Tribolium castaneum] gi|270005900|gb|EFA02348.1| hypothetical protein TcasGA2_TC008018 [Tribolium castaneum] | Back alignment and taxonomy information |
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| >gi|340715035|ref|XP_003396026.1| PREDICTED: head-specific guanylate cyclase-like isoform 1 [Bombus terrestris] gi|340715037|ref|XP_003396027.1| PREDICTED: head-specific guanylate cyclase-like isoform 2 [Bombus terrestris] | Back alignment and taxonomy information |
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| >gi|350417179|ref|XP_003491295.1| PREDICTED: head-specific guanylate cyclase-like isoform 1 [Bombus impatiens] gi|350417181|ref|XP_003491296.1| PREDICTED: head-specific guanylate cyclase-like isoform 2 [Bombus impatiens] | Back alignment and taxonomy information |
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| >gi|332025314|gb|EGI65482.1| Head-specific guanylate cyclase [Acromyrmex echinatior] | Back alignment and taxonomy information |
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| >gi|333033747|dbj|BAK23250.1| soluble guanylyl cyclase alpha-1 subunit [Gryllus bimaculatus] | Back alignment and taxonomy information |
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| >gi|307210703|gb|EFN87126.1| Head-specific guanylate cyclase [Harpegnathos saltator] | Back alignment and taxonomy information |
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| >gi|58585248|ref|NP_001011650.1| soluble guanylyl cyclase alpha 1 subunit [Apis mellifera] gi|54633297|dbj|BAD66824.1| soluble guanylyl cyclase alpha 1 subunit [Apis mellifera] | Back alignment and taxonomy information |
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| >gi|380019972|ref|XP_003693873.1| PREDICTED: head-specific guanylate cyclase-like [Apis florea] | Back alignment and taxonomy information |
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| >gi|307174201|gb|EFN64846.1| Head-specific guanylate cyclase [Camponotus floridanus] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 164 | ||||||
| FB|FBgn0013972 | 676 | Gycalpha99B "Guanylyl cyclase | 0.957 | 0.232 | 0.566 | 9.2e-44 | |
| UNIPROTKB|E1C0P0 | 724 | GUCY1A2 "Uncharacterized prote | 0.939 | 0.212 | 0.474 | 6.4e-33 | |
| UNIPROTKB|P33402 | 732 | GUCY1A2 "Guanylate cyclase sol | 0.939 | 0.210 | 0.461 | 9.8e-31 | |
| UNIPROTKB|J9P369 | 613 | GUCY1A2 "Uncharacterized prote | 0.963 | 0.257 | 0.443 | 1.1e-30 | |
| UNIPROTKB|E2RNY9 | 738 | GUCY1A2 "Uncharacterized prote | 0.963 | 0.214 | 0.443 | 2.1e-30 | |
| UNIPROTKB|F1PI77 | 739 | GUCY1A2 "Uncharacterized prote | 0.963 | 0.213 | 0.443 | 2.1e-30 | |
| RGD|621655 | 730 | Gucy1a2 "guanylate cyclase 1, | 0.939 | 0.210 | 0.448 | 5.6e-30 | |
| UNIPROTKB|E1BP75 | 730 | GUCY1A2 "Uncharacterized prote | 0.939 | 0.210 | 0.455 | 1.2e-29 | |
| UNIPROTKB|P19687 | 691 | GUCY1A1 "Guanylate cyclase sol | 0.951 | 0.225 | 0.426 | 1.7e-29 | |
| UNIPROTKB|B7ZLT5 | 753 | GUCY1A2 "GUCY1A2 protein" [Hom | 0.390 | 0.084 | 0.661 | 2.6e-29 |
| FB|FBgn0013972 Gycalpha99B "Guanylyl cyclase alpha-subunit at 99B" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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Score = 463 (168.0 bits), Expect = 9.2e-44, P = 9.2e-44
Identities = 90/159 (56%), Positives = 113/159 (71%)
Query: 2 SNPSSQSVLDLKIGVASFCKAFPWHFIVDRKLELVQLGAGYMRLFGRCLKHLGSSVNNYF 61
SN S+ S DL++ +SFCK FPWHFI++ +LELVQLG G+ +L+ + G YF
Sbjct: 251 SNSSNAS--DLQMNSSSFCKMFPWHFIMNEQLELVQLGRGFSKLYKPYMADFGCQATTYF 308
Query: 62 EIRRPNLLTVTFSSILKRVNSPFVIAIRLPQSLQNSPVEGLEFKGQMVYCPESESLLFVA 121
+ +RP LT+ F I++R +PF+I + P + P GLE KGQMV+CPES SLLF+
Sbjct: 309 DFKRPKGLTMKFRDIVRRTYTPFLIGLNNPPGAVDFPAIGLEIKGQMVHCPESNSLLFIG 368
Query: 122 SPFLDALDNLTSRGLFISDIPLHDATRDVILVGEQARAQ 160
SPFLD LD LT GLFISDIPLHDATR+VILVGEQARAQ
Sbjct: 369 SPFLDGLDGLTCNGLFISDIPLHDATREVILVGEQARAQ 407
|
|
| UNIPROTKB|E1C0P0 GUCY1A2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P33402 GUCY1A2 "Guanylate cyclase soluble subunit alpha-2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|J9P369 GUCY1A2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E2RNY9 GUCY1A2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1PI77 GUCY1A2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| RGD|621655 Gucy1a2 "guanylate cyclase 1, soluble, alpha 2" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E1BP75 GUCY1A2 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P19687 GUCY1A1 "Guanylate cyclase soluble subunit alpha-1" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|B7ZLT5 GUCY1A2 "GUCY1A2 protein" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 164 | |||
| pfam07701 | 209 | pfam07701, HNOBA, Heme NO binding associated | 3e-64 |
| >gnl|CDD|219526 pfam07701, HNOBA, Heme NO binding associated | Back alignment and domain information |
|---|
Score = 195 bits (497), Expect = 3e-64
Identities = 77/164 (46%), Positives = 106/164 (64%), Gaps = 15/164 (9%)
Query: 11 DLKIGVASFCKAFPWHFIVDRKLELVQLGAGYMRLFGRCLKHLGSSVNNYFEIRRPNLLT 70
LKI A+FCKAFP+H + DR +E+VQ G G +R+ + L + + FE+ RP +T
Sbjct: 5 KLKISTATFCKAFPFHLVFDRDMEIVQAGEGLLRVLPKLLLGKKK-LTDVFELVRP-KIT 62
Query: 71 VTFSSILKRVNSPFVIAIR-------------LPQSLQNSPVEGLEFKGQMVYCPESESL 117
TF +IL +N+ FV+ + + SP++ L KGQM+Y PES+S+
Sbjct: 63 FTFENILSHINTVFVLRTKSGVMSVTDNNNVEDAADIDESPLKSLRLKGQMIYIPESDSI 122
Query: 118 LFVASPFLDALDNLTSRGLFISDIPLHDATRDVILVGEQARAQL 161
LF+ SP +D LD LT RGL++SDIPLHDATRD+IL+GEQARAQL
Sbjct: 123 LFLCSPSVDNLDELTGRGLYLSDIPLHDATRDLILLGEQARAQL 166
|
The HNOBA domain is found associated with the HNOB domain and pfam00211 in soluble cyclases and signalling proteins. The HNOB domain is predicted to function as a heme-dependent sensor for gaseous ligands, and transduce diverse downstream signals, in both bacteria and animals. Length = 209 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 164 | |||
| PF07701 | 219 | HNOBA: Heme NO binding associated; InterPro: IPR01 | 100.0 | |
| KOG4171|consensus | 671 | 100.0 | ||
| PF13426 | 104 | PAS_9: PAS domain; PDB: 3ULF_B 3UE6_E 2Z6D_B 2Z6C_ | 82.83 |
| >PF07701 HNOBA: Heme NO binding associated; InterPro: IPR011645 The HNOBA (Haem NO Binding) domain is found associated with the HNOB domain and IPR001054 from INTERPRO in soluble cyclases and signalling proteins | Back alignment and domain information |
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Probab=100.00 E-value=6.7e-52 Score=335.20 Aligned_cols=152 Identities=43% Similarity=0.793 Sum_probs=98.3
Q ss_pred cccceeCHHHHHhhCCeEEEEcCCccEEEcChhhHhhhccccccCCCccceeEEEccCccceeehhhhhhccCCcEEEEE
Q psy7234 9 VLDLKIGVASFCKAFPWHFIVDRKLELVQLGAGYMRLFGRCLKHLGSSVNNYFEIRRPNLLTVTFSSILKRVNSPFVIAI 88 (164)
Q Consensus 9 ~~~l~i~~~~F~~lFPfHivfd~~l~I~~~G~~L~r~l~~~~~~~g~~~~d~F~l~rP~~i~~tf~~i~~~~~~~f~L~~ 88 (164)
+++++|++++||++|||||+||+||+|+|+|.+|+|++|+. ..|.+++|+|+|+||. +.+||++|+.++|+.|+|++
T Consensus 2 ~~~l~i~~~~F~~lFPFHi~fd~dl~I~~~G~~L~~~~p~~--~~g~~~~d~F~l~rP~-i~~tf~~I~~~~n~~F~L~~ 78 (219)
T PF07701_consen 2 PEDLPISSSTFCKLFPFHIVFDRDLKIVQVGEGLQRLLPDL--LLGKSLTDIFELVRPK-IEFTFDNILSHINNVFELES 78 (219)
T ss_dssp -------HCCHHHHSTT-EEEETT-BEEEE-HHHHHC-SS----TTSBGGGTEEEEESS---S-HHHHHT-TTS-EEEEE
T ss_pred CcCCcCCHHHHHhhCCeEEEECCCCEEEECchHHHHhCccc--ccCCCcceEEEecCCC-CcccHHHHHHhcCCeEEEEE
Confidence 57889999999999999999999999999999999999985 4688899999999999 99999999999999999999
Q ss_pred ecCCCCC------------------------CCCCcceeeeeeEEEeCCCCeEEEeecCCCCchhhHhhcCCcccCCCCC
Q psy7234 89 RLPQSLQ------------------------NSPVEGLEFKGQMVYCPESESLLFVASPFLDALDNLTSRGLFISDIPLH 144 (164)
Q Consensus 89 ~~~~~~~------------------------~~~~~~l~LkGqm~~~~e~~~ilFL~SP~v~~le~l~~~gL~lsD~~~h 144 (164)
+.+.... ....+.++|||||+|++||++|+|||||+++++++|.++||||||||+|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~LkGQM~y~~e~~~ilFl~sP~v~~l~el~~~gl~lsD~p~H 158 (219)
T PF07701_consen 79 KSPVMSTAKNNIPSNSKSTPRSSDQSSRSTVNDEARSLKLKGQMVYLEEWDSILFLGSPVVSSLEELRERGLYLSDLPLH 158 (219)
T ss_dssp -----------------------------------T--EEEEEEEEETTTTEEEEEEEE---TT----------------
T ss_pred CchhhcccccccccccccccccccccccccccccCCceEEEEEEEEecCCCeEEEEcccccCCHHHHHHcCCCccccCCc
Confidence 8743210 0012459999999999999999999999999999999999999999999
Q ss_pred ccchhhhhhhhhHHhhhcc
Q psy7234 145 DATRDVILVGEQARAQLAQ 163 (164)
Q Consensus 145 D~~rDlll~~eq~~ae~~~ 163 (164)
|++||+||+++|++||+++
T Consensus 159 d~~Rdlvl~~~q~~a~~~l 177 (219)
T PF07701_consen 159 DATRDLVLLGQQQSAELKL 177 (219)
T ss_dssp -EHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHH
Confidence 9999999999999999875
|
The HNOB domain is predicted to function as a haem-dependent sensor for gaseous ligands, and transduce diverse downstream signals in both bacteria and animals.; GO: 0004383 guanylate cyclase activity, 0006182 cGMP biosynthetic process; PDB: 2P04_B 2P08_A 3HLS_E. |
| >KOG4171|consensus | Back alignment and domain information |
|---|
| >PF13426 PAS_9: PAS domain; PDB: 3ULF_B 3UE6_E 2Z6D_B 2Z6C_B 3P7N_B 1LL8_A 3MJQ_A 3BWL_A 4EET_B 4EEP_A | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 164 | ||||
| 2p04_A | 121 | 2.1 Ang Structure Of The Dimerized Pas Domain Of Si | 2e-11 | ||
| 2p08_A | 115 | Structure Of The N-Terminally Truncated Pas Domain | 2e-11 |
| >pdb|2P04|A Chain A, 2.1 Ang Structure Of The Dimerized Pas Domain Of Signal Transduction Histidine Kinase From Nostoc Punctiforme Pcc 73102 With Homology To The H-NoxaH-Noba Domain Of The Soluble Guanylyl Cyclase Length = 121 | Back alignment and structure |
|
| >pdb|2P08|A Chain A, Structure Of The N-Terminally Truncated Pas Domain Of Signal Transduction Histidine Kinase From Nostoc Punctiforme Pcc 73102 With Homology To The H-NoxaH-Noba Domain Of The Soluble Guanylyl Cyclase Length = 115 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 164 | |||
| 2p08_A | 115 | Signal transduction histidine kinase; PAS-like dom | 1e-33 | |
| 3hls_A | 66 | Guanylate cyclase soluble subunit beta-1; coiled-c | 2e-04 |
| >2p08_A Signal transduction histidine kinase; PAS-like domain, homologous to domain in soluble guanylyl CY transferase; 2.00A {Nostoc punctiforme} PDB: 2p04_A Length = 115 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 1e-33
Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 12/125 (9%)
Query: 14 IGVASFCKAFPWHFIVDRKLELVQLGAGYMRLFGRCLKHLGSSVNNYFEIRRPNLLTVTF 73
+ KAFP+HF R E+VQ G R+ L +G + +F+I RP + + F
Sbjct: 2 LSPELLAKAFPFHFAFSRNREIVQTGEVLERISPEPL--VGKLIEQHFQINRPKI-LIDF 58
Query: 74 SSILKRVNSPFVIAIRLPQSLQNSPVEGLEFKGQMVYCPESESLLFVASPFLDALDNLTS 133
+I K+ + F++ G++ KGQM+Y PE E + F+ SP++ +L
Sbjct: 59 DAISKQPRALFILEFL---------HNGMQLKGQMMYQPEEEVIFFLGSPWITDTTSLAP 109
Query: 134 RGLFI 138
G+ +
Sbjct: 110 LGIKL 114
|
| >3hls_A Guanylate cyclase soluble subunit beta-1; coiled-coil domain, signaling helix, S-helix, CGMP biosynthesis, cytoplasm, GTP-binding, heme, iron; 2.15A {Rattus norvegicus} Length = 66 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 164 | |||
| 2p08_A | 115 | Signal transduction histidine kinase; PAS-like dom | 100.0 | |
| 3hls_A | 66 | Guanylate cyclase soluble subunit beta-1; coiled-c | 97.58 |
| >2p08_A Signal transduction histidine kinase; PAS-like domain, homologous to domain in soluble guanylyl CY transferase; 2.00A {Nostoc punctiforme} PDB: 2p04_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-42 Score=254.86 Aligned_cols=114 Identities=31% Similarity=0.608 Sum_probs=101.6
Q ss_pred eCHHHHHhhCCeEEEEcCCccEEEcChhhHhhhccccccCCCccceeEEEccCccceeehhhhhhccCCcEEEEEecCCC
Q psy7234 14 IGVASFCKAFPWHFIVDRKLELVQLGAGYMRLFGRCLKHLGSSVNNYFEIRRPNLLTVTFSSILKRVNSPFVIAIRLPQS 93 (164)
Q Consensus 14 i~~~~F~~lFPfHivfd~~l~I~~~G~~L~r~l~~~~~~~g~~~~d~F~l~rP~~i~~tf~~i~~~~~~~f~L~~~~~~~ 93 (164)
|++++||++||||++||++|+|+|+|++|+|++|+. ..|+++.|+|+++||+ +.+||++|++++|+.|+|+++.
T Consensus 2 i~~~~f~~lFPfHlvfd~~~~I~q~G~~L~k~~p~~--~~g~~~~d~F~l~RP~-~~~tf~~i~~~~n~~f~L~~~~--- 75 (115)
T 2p08_A 2 LSPELLAKAFPFHFAFSRNREIVQTGEVLERISPEP--LVGKLIEQHFQINRPK-ILIDFDAISKQPRALFILEFLH--- 75 (115)
T ss_dssp CCHHHHHHHCTTCEEECTTCBEEEECHHHHHHCSSC--CTTSBGGGTEEEEESS-CCSCHHHHHTCTTSCEEEEETT---
T ss_pred cChHHHHHhCCeEEEECCCCEEEEeccHHHHhCccc--cCCCChhHeEEEeCCC-cccCHHHHHhhcCCEEEEEEcC---
Confidence 689999999999999999999999999999999974 3799999999999999 9999999999999999999873
Q ss_pred CCCCCCcceeeeeeEEEeCCCCeEEEeecCCCCchhhHhhcCCccc
Q psy7234 94 LQNSPVEGLEFKGQMVYCPESESLLFVASPFLDALDNLTSRGLFIS 139 (164)
Q Consensus 94 ~~~~~~~~l~LkGqm~~~~e~~~ilFL~SP~v~~le~l~~~gL~ls 139 (164)
+.++|||||+|++||++|+|||||+++++|||.++|||||
T Consensus 76 ------~~l~LKGqm~~~~e~~~ilfL~sP~v~~l~~l~~~GL~l~ 115 (115)
T 2p08_A 76 ------NGMQLKGQMMYQPEEEVIFFLGSPWITDTTSLAPLGIKLK 115 (115)
T ss_dssp ------TCCEEEEEEEEETTTTEEEEEEEECCCTTCCC--------
T ss_pred ------CCcEEEEEEEEcCCCCEEEEEeCCCcCCHHHHHHcCcccC
Confidence 6799999999999999999999999999999999999986
|
| >3hls_A Guanylate cyclase soluble subunit beta-1; coiled-coil domain, signaling helix, S-helix, CGMP biosynthesis, cytoplasm, GTP-binding, heme, iron; 2.15A {Rattus norvegicus} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 164 | |||
| d1mzua_ | 110 | PYP domain of sensor histidine kinase Ppr {Rhodosp | 83.54 |
| >d1mzua_ d.110.3.1 (A:) PYP domain of sensor histidine kinase Ppr {Rhodospirillum centenum [TaxId: 34018]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Profilin-like superfamily: PYP-like sensor domain (PAS domain) family: PYP-like domain: PYP domain of sensor histidine kinase Ppr species: Rhodospirillum centenum [TaxId: 34018]
Probab=83.54 E-value=1.5 Score=28.02 Aligned_cols=40 Identities=23% Similarity=0.201 Sum_probs=31.2
Q ss_pred hCCeE-EEEcCCccEEEcChhhHhhhccc-cccCCCccceeE
Q psy7234 22 AFPWH-FIVDRKLELVQLGAGYMRLFGRC-LKHLGSSVNNYF 61 (164)
Q Consensus 22 lFPfH-ivfd~~l~I~~~G~~L~r~l~~~-~~~~g~~~~d~F 61 (164)
..|+- +++|++|+|+.+-+...++++-. ....|+++.+.|
T Consensus 11 ~~p~gvi~~D~~G~I~~~N~aa~~~~G~~~eellG~~~~~~~ 52 (110)
T d1mzua_ 11 ALPVGAIQVDGSGVIHRYNRTESRLSGRIPERVIGRNFFTEV 52 (110)
T ss_dssp GCSSEEEEEETTCBEEEECHHHHHHHCCCHHHHTTSBCCCCC
T ss_pred CCCcEEEEEcCCCCEEEeHHHHHHHHcCCHHHHcCCCHHHhc
Confidence 34554 56899999999999999999644 237899987755
|