Psyllid ID: psy7234


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160----
MSNPSSQSVLDLKIGVASFCKAFPWHFIVDRKLELVQLGAGYMRLFGRCLKHLGSSVNNYFEIRRPNLLTVTFSSILKRVNSPFVIAIRLPQSLQNSPVEGLEFKGQMVYCPESESLLFVASPFLDALDNLTSRGLFISDIPLHDATRDVILVGEQARAQLAQT
cccccccccccccccHHHHHHHcccEEEEccccEEEEccHHHHHHHcccccccccccccEEEEcccccccccHHHHHHcccccEEEEEcccccccccccccccccEEEEEEcccccEEEEEccccccHHHHHHcccccccccccccHHHHHHHcHHHHHHHHcc
cccccccccccccccHHHHHHcccEEEEEcccEEEEEcHHHHHHHccHHHccccccHHHEEEEEccccEEEcHHHHHHHHccEEEEEEEccccccccccccEEEccEEEEEccccEEEEEcccccccHHHHHHcccEEcccccccHHHHHHHHHHHHHHHHHcc
msnpssqsvlDLKIGVASFCkafpwhfivdRKLELVQLGAGYMRLFGRCLKHLgssvnnyfeirrpnllTVTFSSIlkrvnspfviairlpqslqnspveglefkgqmvycpesesllfvaSPFLdaldnltsrglfisdiplhdatrDVILVGEQARAQLAQT
msnpssqsvLDLKIGVASFCKAFPWHFIVDRKLELVQLGAGYMRLFGRCLKHLGSSVNNYFEIRRPNLLTVTFSSILKRVNSPFVIAIRLPQSLQNSPVEGLEFKGQMVYCPESESLLFVASPFLDALDNLTSRGLFISDIPLHDATRDVILVGEQARAQLAQT
MSNPSSQSVLDLKIGVASFCKAFPWHFIVDRKLELVQLGAGYMRLFGRCLKHLGSSVNNYFEIRRPNLLTVTFSSILKRVNSPFVIAIRLPQSLQNSPVEGLEFKGQMVYCPESESLLFVASPFLDALDNLTSRGLFISDIPLHDATRDVILVGEQARAQLAQT
********VLDLKIGVASFCKAFPWHFIVDRKLELVQLGAGYMRLFGRCLKHLGSSVNNYFEIRRPNLLTVTFSSILKRVNSPFVIAIRLPQSLQNSPVEGLEFKGQMVYCPESESLLFVASPFLDALDNLTSRGLFISDIPLHDATRDVILVG**********
************KIGVASFCKAFPWHFIVDRKLELVQLGAGYMRLFGRCLKHLGSSVNNYFEIRRPNLLTVTFSSILKRVNSPFVIAIRLPQSL*N*******FKGQMVYCPESESLLFVASPFLDALDNLTSRGLFISDIPLHDATRDVILVGEQA*******
*********LDLKIGVASFCKAFPWHFIVDRKLELVQLGAGYMRLFGRCLKHLGSSVNNYFEIRRPNLLTVTFSSILKRVNSPFVIAIRLPQSLQNSPVEGLEFKGQMVYCPESESLLFVASPFLDALDNLTSRGLFISDIPLHDATRDVILVGEQARAQLAQT
**********DLKIGVASFCKAFPWHFIVDRKLELVQLGAGYMRLFGRCLKHLGSSVNNYFEIRRPNLLTVTFSSILKRVNSPFVIAIRLPQSLQNSPVEGLEFKGQMVYCPESESLLFVASPFLDALDNLTSRGLFISDIPLHDATRDVILVGEQARAQ****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSNPSSQSVLDLKIGVASFCKAFPWHFIVDRKLELVQLGAGYMRLFGRCLKHLGSSVNNYFEIRRPNLLTVTFSSILKRVNSPFVIAIRLPQSLQNSPVEGLEFKGQMVYCPESESLLFVASPFLDALDNLTSRGLFISDIPLHDATRDVILVGEQARAQLAQT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query164 2.2.26 [Sep-21-2011]
Q07093 676 Head-specific guanylate c yes N/A 0.957 0.232 0.566 9e-48
P33402 732 Guanylate cyclase soluble yes N/A 0.939 0.210 0.467 2e-33
Q9WVI4 730 Guanylate cyclase soluble yes N/A 0.939 0.210 0.455 9e-33
P19687 691 Guanylate cyclase soluble no N/A 0.951 0.225 0.426 4e-31
P19686 690 Guanylate cyclase soluble no N/A 0.902 0.214 0.442 5e-30
Q9ERL9 691 Guanylate cyclase soluble no N/A 0.902 0.214 0.436 4e-29
Q02108 690 Guanylate cyclase soluble no N/A 0.902 0.214 0.422 6e-29
Q4ZHS0 690 Guanylate cyclase soluble no N/A 0.902 0.214 0.416 1e-28
P20595 619 Guanylate cyclase soluble no N/A 0.896 0.237 0.390 4e-27
Q4ZHR9 619 Guanylate cyclase soluble no N/A 0.914 0.242 0.395 1e-26
>sp|Q07093|GCYH_DROME Head-specific guanylate cyclase OS=Drosophila melanogaster GN=Gycalpha99B PE=2 SV=2 Back     alignment and function desciption
 Score =  189 bits (479), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 90/159 (56%), Positives = 113/159 (71%), Gaps = 2/159 (1%)

Query: 2   SNPSSQSVLDLKIGVASFCKAFPWHFIVDRKLELVQLGAGYMRLFGRCLKHLGSSVNNYF 61
           SN S+ S  DL++  +SFCK FPWHFI++ +LELVQLG G+ +L+   +   G     YF
Sbjct: 251 SNSSNAS--DLQMNSSSFCKMFPWHFIMNEQLELVQLGRGFSKLYKPYMADFGCQATTYF 308

Query: 62  EIRRPNLLTVTFSSILKRVNSPFVIAIRLPQSLQNSPVEGLEFKGQMVYCPESESLLFVA 121
           + +RP  LT+ F  I++R  +PF+I +  P    + P  GLE KGQMV+CPES SLLF+ 
Sbjct: 309 DFKRPKGLTMKFRDIVRRTYTPFLIGLNNPPGAVDFPAIGLEIKGQMVHCPESNSLLFIG 368

Query: 122 SPFLDALDNLTSRGLFISDIPLHDATRDVILVGEQARAQ 160
           SPFLD LD LT  GLFISDIPLHDATR+VILVGEQARAQ
Sbjct: 369 SPFLDGLDGLTCNGLFISDIPLHDATREVILVGEQARAQ 407




May have a role in phototransduction. A second subunit may be required for enzyme activity.
Drosophila melanogaster (taxid: 7227)
EC: 4EC: .EC: 6EC: .EC: 1EC: .EC: 2
>sp|P33402|GCYA2_HUMAN Guanylate cyclase soluble subunit alpha-2 OS=Homo sapiens GN=GUCY1A2 PE=1 SV=1 Back     alignment and function description
>sp|Q9WVI4|GCYA2_RAT Guanylate cyclase soluble subunit alpha-2 OS=Rattus norvegicus GN=Gucy1a2 PE=2 SV=2 Back     alignment and function description
>sp|P19687|GCYA1_BOVIN Guanylate cyclase soluble subunit alpha-1 OS=Bos taurus GN=GUCY1A1 PE=1 SV=1 Back     alignment and function description
>sp|P19686|GCYA3_RAT Guanylate cyclase soluble subunit alpha-3 OS=Rattus norvegicus GN=Gucy1a3 PE=1 SV=1 Back     alignment and function description
>sp|Q9ERL9|GCYA3_MOUSE Guanylate cyclase soluble subunit alpha-3 OS=Mus musculus GN=Gucy1a3 PE=2 SV=2 Back     alignment and function description
>sp|Q02108|GCYA3_HUMAN Guanylate cyclase soluble subunit alpha-3 OS=Homo sapiens GN=GUCY1A3 PE=1 SV=2 Back     alignment and function description
>sp|Q4ZHS0|GCYA3_CANFA Guanylate cyclase soluble subunit alpha-3 OS=Canis familiaris GN=GUCY1A3 PE=2 SV=1 Back     alignment and function description
>sp|P20595|GCYB1_RAT Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus GN=Gucy1b3 PE=1 SV=2 Back     alignment and function description
>sp|Q4ZHR9|GCYB1_CANFA Guanylate cyclase soluble subunit beta-1 OS=Canis familiaris GN=GUCY1B3 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query164
383855632 702 PREDICTED: head-specific guanylate cycla 0.957 0.223 0.662 2e-58
91080827 670 PREDICTED: similar to soluble guanylyl c 0.920 0.225 0.682 3e-58
340715035 702 PREDICTED: head-specific guanylate cycla 0.957 0.223 0.656 9e-58
350417179 702 PREDICTED: head-specific guanylate cycla 0.957 0.223 0.656 9e-58
332025314 631 Head-specific guanylate cyclase [Acromyr 0.957 0.248 0.643 2e-57
333033747 702 soluble guanylyl cyclase alpha-1 subunit 0.914 0.213 0.686 2e-57
307210703 598 Head-specific guanylate cyclase [Harpegn 0.957 0.262 0.643 3e-57
58585248 699 soluble guanylyl cyclase alpha 1 subunit 0.957 0.224 0.656 4e-57
380019972 700 PREDICTED: head-specific guanylate cycla 0.957 0.224 0.656 4e-57
307174201 553 Head-specific guanylate cyclase [Campono 0.957 0.283 0.643 5e-57
>gi|383855632|ref|XP_003703314.1| PREDICTED: head-specific guanylate cyclase-like [Megachile rotundata] Back     alignment and taxonomy information
 Score =  230 bits (586), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 104/157 (66%), Positives = 126/157 (80%)

Query: 4   PSSQSVLDLKIGVASFCKAFPWHFIVDRKLELVQLGAGYMRLFGRCLKHLGSSVNNYFEI 63
           P S    DL++GVASFCKAFPWHF+VDR+LELVQLG G+MR+FG  L  LG  ++ YF  
Sbjct: 279 PLSTEATDLRMGVASFCKAFPWHFVVDRQLELVQLGVGFMRIFGHHLNRLGREISTYFAF 338

Query: 64  RRPNLLTVTFSSILKRVNSPFVIAIRLPQSLQNSPVEGLEFKGQMVYCPESESLLFVASP 123
            RP+ +T+TF  ILKR N+PFV+ ++ PQ +   P EGLE KGQMV+CPES+S+LFV+SP
Sbjct: 339 TRPSGVTLTFHEILKRANTPFVLTLQRPQGVDKYPAEGLEMKGQMVHCPESDSILFVSSP 398

Query: 124 FLDALDNLTSRGLFISDIPLHDATRDVILVGEQARAQ 160
           FL+ L+ LT RGLFISDIPLHDATRDVILVGEQARAQ
Sbjct: 399 FLNGLEGLTGRGLFISDIPLHDATRDVILVGEQARAQ 435




Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91080827|ref|XP_970511.1| PREDICTED: similar to soluble guanylyl cyclase alpha-1 subunit [Tribolium castaneum] gi|270005900|gb|EFA02348.1| hypothetical protein TcasGA2_TC008018 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|340715035|ref|XP_003396026.1| PREDICTED: head-specific guanylate cyclase-like isoform 1 [Bombus terrestris] gi|340715037|ref|XP_003396027.1| PREDICTED: head-specific guanylate cyclase-like isoform 2 [Bombus terrestris] Back     alignment and taxonomy information
>gi|350417179|ref|XP_003491295.1| PREDICTED: head-specific guanylate cyclase-like isoform 1 [Bombus impatiens] gi|350417181|ref|XP_003491296.1| PREDICTED: head-specific guanylate cyclase-like isoform 2 [Bombus impatiens] Back     alignment and taxonomy information
>gi|332025314|gb|EGI65482.1| Head-specific guanylate cyclase [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|333033747|dbj|BAK23250.1| soluble guanylyl cyclase alpha-1 subunit [Gryllus bimaculatus] Back     alignment and taxonomy information
>gi|307210703|gb|EFN87126.1| Head-specific guanylate cyclase [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|58585248|ref|NP_001011650.1| soluble guanylyl cyclase alpha 1 subunit [Apis mellifera] gi|54633297|dbj|BAD66824.1| soluble guanylyl cyclase alpha 1 subunit [Apis mellifera] Back     alignment and taxonomy information
>gi|380019972|ref|XP_003693873.1| PREDICTED: head-specific guanylate cyclase-like [Apis florea] Back     alignment and taxonomy information
>gi|307174201|gb|EFN64846.1| Head-specific guanylate cyclase [Camponotus floridanus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query164
FB|FBgn0013972 676 Gycalpha99B "Guanylyl cyclase 0.957 0.232 0.566 9.2e-44
UNIPROTKB|E1C0P0 724 GUCY1A2 "Uncharacterized prote 0.939 0.212 0.474 6.4e-33
UNIPROTKB|P33402 732 GUCY1A2 "Guanylate cyclase sol 0.939 0.210 0.461 9.8e-31
UNIPROTKB|J9P369 613 GUCY1A2 "Uncharacterized prote 0.963 0.257 0.443 1.1e-30
UNIPROTKB|E2RNY9 738 GUCY1A2 "Uncharacterized prote 0.963 0.214 0.443 2.1e-30
UNIPROTKB|F1PI77 739 GUCY1A2 "Uncharacterized prote 0.963 0.213 0.443 2.1e-30
RGD|621655 730 Gucy1a2 "guanylate cyclase 1, 0.939 0.210 0.448 5.6e-30
UNIPROTKB|E1BP75 730 GUCY1A2 "Uncharacterized prote 0.939 0.210 0.455 1.2e-29
UNIPROTKB|P19687 691 GUCY1A1 "Guanylate cyclase sol 0.951 0.225 0.426 1.7e-29
UNIPROTKB|B7ZLT5 753 GUCY1A2 "GUCY1A2 protein" [Hom 0.390 0.084 0.661 2.6e-29
FB|FBgn0013972 Gycalpha99B "Guanylyl cyclase alpha-subunit at 99B" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 463 (168.0 bits), Expect = 9.2e-44, P = 9.2e-44
 Identities = 90/159 (56%), Positives = 113/159 (71%)

Query:     2 SNPSSQSVLDLKIGVASFCKAFPWHFIVDRKLELVQLGAGYMRLFGRCLKHLGSSVNNYF 61
             SN S+ S  DL++  +SFCK FPWHFI++ +LELVQLG G+ +L+   +   G     YF
Sbjct:   251 SNSSNAS--DLQMNSSSFCKMFPWHFIMNEQLELVQLGRGFSKLYKPYMADFGCQATTYF 308

Query:    62 EIRRPNLLTVTFSSILKRVNSPFVIAIRLPQSLQNSPVEGLEFKGQMVYCPESESLLFVA 121
             + +RP  LT+ F  I++R  +PF+I +  P    + P  GLE KGQMV+CPES SLLF+ 
Sbjct:   309 DFKRPKGLTMKFRDIVRRTYTPFLIGLNNPPGAVDFPAIGLEIKGQMVHCPESNSLLFIG 368

Query:   122 SPFLDALDNLTSRGLFISDIPLHDATRDVILVGEQARAQ 160
             SPFLD LD LT  GLFISDIPLHDATR+VILVGEQARAQ
Sbjct:   369 SPFLDGLDGLTCNGLFISDIPLHDATREVILVGEQARAQ 407




GO:0004383 "guanylate cyclase activity" evidence=NAS;IDA
GO:0008074 "guanylate cyclase complex, soluble" evidence=NAS;IDA
GO:0046956 "positive phototaxis" evidence=IMP
GO:0016056 "rhodopsin mediated signaling pathway" evidence=IMP
GO:0005737 "cytoplasm" evidence=NAS
GO:0020037 "heme binding" evidence=IEA
GO:0006182 "cGMP biosynthetic process" evidence=IEA
GO:0035556 "intracellular signal transduction" evidence=IEA
UNIPROTKB|E1C0P0 GUCY1A2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|P33402 GUCY1A2 "Guanylate cyclase soluble subunit alpha-2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|J9P369 GUCY1A2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|E2RNY9 GUCY1A2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1PI77 GUCY1A2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
RGD|621655 Gucy1a2 "guanylate cyclase 1, soluble, alpha 2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|E1BP75 GUCY1A2 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|P19687 GUCY1A1 "Guanylate cyclase soluble subunit alpha-1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|B7ZLT5 GUCY1A2 "GUCY1A2 protein" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q07093GCYH_DROME4, ., 6, ., 1, ., 20.56600.95730.2322yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query164
pfam07701209 pfam07701, HNOBA, Heme NO binding associated 3e-64
>gnl|CDD|219526 pfam07701, HNOBA, Heme NO binding associated Back     alignment and domain information
 Score =  195 bits (497), Expect = 3e-64
 Identities = 77/164 (46%), Positives = 106/164 (64%), Gaps = 15/164 (9%)

Query: 11  DLKIGVASFCKAFPWHFIVDRKLELVQLGAGYMRLFGRCLKHLGSSVNNYFEIRRPNLLT 70
            LKI  A+FCKAFP+H + DR +E+VQ G G +R+  + L      + + FE+ RP  +T
Sbjct: 5   KLKISTATFCKAFPFHLVFDRDMEIVQAGEGLLRVLPKLLLGKKK-LTDVFELVRP-KIT 62

Query: 71  VTFSSILKRVNSPFVIAIR-------------LPQSLQNSPVEGLEFKGQMVYCPESESL 117
            TF +IL  +N+ FV+  +                 +  SP++ L  KGQM+Y PES+S+
Sbjct: 63  FTFENILSHINTVFVLRTKSGVMSVTDNNNVEDAADIDESPLKSLRLKGQMIYIPESDSI 122

Query: 118 LFVASPFLDALDNLTSRGLFISDIPLHDATRDVILVGEQARAQL 161
           LF+ SP +D LD LT RGL++SDIPLHDATRD+IL+GEQARAQL
Sbjct: 123 LFLCSPSVDNLDELTGRGLYLSDIPLHDATRDLILLGEQARAQL 166


The HNOBA domain is found associated with the HNOB domain and pfam00211 in soluble cyclases and signalling proteins. The HNOB domain is predicted to function as a heme-dependent sensor for gaseous ligands, and transduce diverse downstream signals, in both bacteria and animals. Length = 209

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 164
PF07701219 HNOBA: Heme NO binding associated; InterPro: IPR01 100.0
KOG4171|consensus 671 100.0
PF13426104 PAS_9: PAS domain; PDB: 3ULF_B 3UE6_E 2Z6D_B 2Z6C_ 82.83
>PF07701 HNOBA: Heme NO binding associated; InterPro: IPR011645 The HNOBA (Haem NO Binding) domain is found associated with the HNOB domain and IPR001054 from INTERPRO in soluble cyclases and signalling proteins Back     alignment and domain information
Probab=100.00  E-value=6.7e-52  Score=335.20  Aligned_cols=152  Identities=43%  Similarity=0.793  Sum_probs=98.3

Q ss_pred             cccceeCHHHHHhhCCeEEEEcCCccEEEcChhhHhhhccccccCCCccceeEEEccCccceeehhhhhhccCCcEEEEE
Q psy7234           9 VLDLKIGVASFCKAFPWHFIVDRKLELVQLGAGYMRLFGRCLKHLGSSVNNYFEIRRPNLLTVTFSSILKRVNSPFVIAI   88 (164)
Q Consensus         9 ~~~l~i~~~~F~~lFPfHivfd~~l~I~~~G~~L~r~l~~~~~~~g~~~~d~F~l~rP~~i~~tf~~i~~~~~~~f~L~~   88 (164)
                      +++++|++++||++|||||+||+||+|+|+|.+|+|++|+.  ..|.+++|+|+|+||. +.+||++|+.++|+.|+|++
T Consensus         2 ~~~l~i~~~~F~~lFPFHi~fd~dl~I~~~G~~L~~~~p~~--~~g~~~~d~F~l~rP~-i~~tf~~I~~~~n~~F~L~~   78 (219)
T PF07701_consen    2 PEDLPISSSTFCKLFPFHIVFDRDLKIVQVGEGLQRLLPDL--LLGKSLTDIFELVRPK-IEFTFDNILSHINNVFELES   78 (219)
T ss_dssp             -------HCCHHHHSTT-EEEETT-BEEEE-HHHHHC-SS----TTSBGGGTEEEEESS---S-HHHHHT-TTS-EEEEE
T ss_pred             CcCCcCCHHHHHhhCCeEEEECCCCEEEECchHHHHhCccc--ccCCCcceEEEecCCC-CcccHHHHHHhcCCeEEEEE
Confidence            57889999999999999999999999999999999999985  4688899999999999 99999999999999999999


Q ss_pred             ecCCCCC------------------------CCCCcceeeeeeEEEeCCCCeEEEeecCCCCchhhHhhcCCcccCCCCC
Q psy7234          89 RLPQSLQ------------------------NSPVEGLEFKGQMVYCPESESLLFVASPFLDALDNLTSRGLFISDIPLH  144 (164)
Q Consensus        89 ~~~~~~~------------------------~~~~~~l~LkGqm~~~~e~~~ilFL~SP~v~~le~l~~~gL~lsD~~~h  144 (164)
                      +.+....                        ....+.++|||||+|++||++|+|||||+++++++|.++||||||||+|
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~LkGQM~y~~e~~~ilFl~sP~v~~l~el~~~gl~lsD~p~H  158 (219)
T PF07701_consen   79 KSPVMSTAKNNIPSNSKSTPRSSDQSSRSTVNDEARSLKLKGQMVYLEEWDSILFLGSPVVSSLEELRERGLYLSDLPLH  158 (219)
T ss_dssp             -----------------------------------T--EEEEEEEEETTTTEEEEEEEE---TT----------------
T ss_pred             CchhhcccccccccccccccccccccccccccccCCceEEEEEEEEecCCCeEEEEcccccCCHHHHHHcCCCccccCCc
Confidence            8743210                        0012459999999999999999999999999999999999999999999


Q ss_pred             ccchhhhhhhhhHHhhhcc
Q psy7234         145 DATRDVILVGEQARAQLAQ  163 (164)
Q Consensus       145 D~~rDlll~~eq~~ae~~~  163 (164)
                      |++||+||+++|++||+++
T Consensus       159 d~~Rdlvl~~~q~~a~~~l  177 (219)
T PF07701_consen  159 DATRDLVLLGQQQSAELKL  177 (219)
T ss_dssp             -EHHHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHH
Confidence            9999999999999999875



The HNOB domain is predicted to function as a haem-dependent sensor for gaseous ligands, and transduce diverse downstream signals in both bacteria and animals.; GO: 0004383 guanylate cyclase activity, 0006182 cGMP biosynthetic process; PDB: 2P04_B 2P08_A 3HLS_E.

>KOG4171|consensus Back     alignment and domain information
>PF13426 PAS_9: PAS domain; PDB: 3ULF_B 3UE6_E 2Z6D_B 2Z6C_B 3P7N_B 1LL8_A 3MJQ_A 3BWL_A 4EET_B 4EEP_A Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query164
2p04_A121 2.1 Ang Structure Of The Dimerized Pas Domain Of Si 2e-11
2p08_A115 Structure Of The N-Terminally Truncated Pas Domain 2e-11
>pdb|2P04|A Chain A, 2.1 Ang Structure Of The Dimerized Pas Domain Of Signal Transduction Histidine Kinase From Nostoc Punctiforme Pcc 73102 With Homology To The H-NoxaH-Noba Domain Of The Soluble Guanylyl Cyclase Length = 121 Back     alignment and structure

Iteration: 1

Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 39/117 (33%), Positives = 63/117 (53%), Gaps = 12/117 (10%) Query: 20 CKAFPWHFIVDRKLELVQLGAGYMRLFGRCLKHLGSSVNNYFEIRRPNLLTVTFSSILKR 79 KAFP+HF R E+VQ G R+ L +G + +F+I RP +L + F +I K+ Sbjct: 14 AKAFPFHFAFSRNREIVQTGEVLERISPEPL--VGKLIEQHFQINRPKIL-IDFDAISKQ 70 Query: 80 VNSPFVIAIRLPQSLQNSPVEGLEFKGQMVYCPESESLLFVASPFLDALDNLTSRGL 136 + F++ + L N G++ KGQM+Y PE E + F+ SP++ +L G+ Sbjct: 71 PRALFIL-----EFLHN----GMQLKGQMMYQPEEEVIFFLGSPWITDTTSLAPLGI 118
>pdb|2P08|A Chain A, Structure Of The N-Terminally Truncated Pas Domain Of Signal Transduction Histidine Kinase From Nostoc Punctiforme Pcc 73102 With Homology To The H-NoxaH-Noba Domain Of The Soluble Guanylyl Cyclase Length = 115 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query164
2p08_A115 Signal transduction histidine kinase; PAS-like dom 1e-33
3hls_A66 Guanylate cyclase soluble subunit beta-1; coiled-c 2e-04
>2p08_A Signal transduction histidine kinase; PAS-like domain, homologous to domain in soluble guanylyl CY transferase; 2.00A {Nostoc punctiforme} PDB: 2p04_A Length = 115 Back     alignment and structure
 Score =  113 bits (285), Expect = 1e-33
 Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 12/125 (9%)

Query: 14  IGVASFCKAFPWHFIVDRKLELVQLGAGYMRLFGRCLKHLGSSVNNYFEIRRPNLLTVTF 73
           +      KAFP+HF   R  E+VQ G    R+    L  +G  +  +F+I RP +  + F
Sbjct: 2   LSPELLAKAFPFHFAFSRNREIVQTGEVLERISPEPL--VGKLIEQHFQINRPKI-LIDF 58

Query: 74  SSILKRVNSPFVIAIRLPQSLQNSPVEGLEFKGQMVYCPESESLLFVASPFLDALDNLTS 133
            +I K+  + F++              G++ KGQM+Y PE E + F+ SP++    +L  
Sbjct: 59  DAISKQPRALFILEFL---------HNGMQLKGQMMYQPEEEVIFFLGSPWITDTTSLAP 109

Query: 134 RGLFI 138
            G+ +
Sbjct: 110 LGIKL 114


>3hls_A Guanylate cyclase soluble subunit beta-1; coiled-coil domain, signaling helix, S-helix, CGMP biosynthesis, cytoplasm, GTP-binding, heme, iron; 2.15A {Rattus norvegicus} Length = 66 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query164
2p08_A115 Signal transduction histidine kinase; PAS-like dom 100.0
3hls_A66 Guanylate cyclase soluble subunit beta-1; coiled-c 97.58
>2p08_A Signal transduction histidine kinase; PAS-like domain, homologous to domain in soluble guanylyl CY transferase; 2.00A {Nostoc punctiforme} PDB: 2p04_A Back     alignment and structure
Probab=100.00  E-value=1.3e-42  Score=254.86  Aligned_cols=114  Identities=31%  Similarity=0.608  Sum_probs=101.6

Q ss_pred             eCHHHHHhhCCeEEEEcCCccEEEcChhhHhhhccccccCCCccceeEEEccCccceeehhhhhhccCCcEEEEEecCCC
Q psy7234          14 IGVASFCKAFPWHFIVDRKLELVQLGAGYMRLFGRCLKHLGSSVNNYFEIRRPNLLTVTFSSILKRVNSPFVIAIRLPQS   93 (164)
Q Consensus        14 i~~~~F~~lFPfHivfd~~l~I~~~G~~L~r~l~~~~~~~g~~~~d~F~l~rP~~i~~tf~~i~~~~~~~f~L~~~~~~~   93 (164)
                      |++++||++||||++||++|+|+|+|++|+|++|+.  ..|+++.|+|+++||+ +.+||++|++++|+.|+|+++.   
T Consensus         2 i~~~~f~~lFPfHlvfd~~~~I~q~G~~L~k~~p~~--~~g~~~~d~F~l~RP~-~~~tf~~i~~~~n~~f~L~~~~---   75 (115)
T 2p08_A            2 LSPELLAKAFPFHFAFSRNREIVQTGEVLERISPEP--LVGKLIEQHFQINRPK-ILIDFDAISKQPRALFILEFLH---   75 (115)
T ss_dssp             CCHHHHHHHCTTCEEECTTCBEEEECHHHHHHCSSC--CTTSBGGGTEEEEESS-CCSCHHHHHTCTTSCEEEEETT---
T ss_pred             cChHHHHHhCCeEEEECCCCEEEEeccHHHHhCccc--cCCCChhHeEEEeCCC-cccCHHHHHhhcCCEEEEEEcC---
Confidence            689999999999999999999999999999999974  3799999999999999 9999999999999999999873   


Q ss_pred             CCCCCCcceeeeeeEEEeCCCCeEEEeecCCCCchhhHhhcCCccc
Q psy7234          94 LQNSPVEGLEFKGQMVYCPESESLLFVASPFLDALDNLTSRGLFIS  139 (164)
Q Consensus        94 ~~~~~~~~l~LkGqm~~~~e~~~ilFL~SP~v~~le~l~~~gL~ls  139 (164)
                            +.++|||||+|++||++|+|||||+++++|||.++|||||
T Consensus        76 ------~~l~LKGqm~~~~e~~~ilfL~sP~v~~l~~l~~~GL~l~  115 (115)
T 2p08_A           76 ------NGMQLKGQMMYQPEEEVIFFLGSPWITDTTSLAPLGIKLK  115 (115)
T ss_dssp             ------TCCEEEEEEEEETTTTEEEEEEEECCCTTCCC--------
T ss_pred             ------CCcEEEEEEEEcCCCCEEEEEeCCCcCCHHHHHHcCcccC
Confidence                  6799999999999999999999999999999999999986



>3hls_A Guanylate cyclase soluble subunit beta-1; coiled-coil domain, signaling helix, S-helix, CGMP biosynthesis, cytoplasm, GTP-binding, heme, iron; 2.15A {Rattus norvegicus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query164
d1mzua_110 PYP domain of sensor histidine kinase Ppr {Rhodosp 83.54
>d1mzua_ d.110.3.1 (A:) PYP domain of sensor histidine kinase Ppr {Rhodospirillum centenum [TaxId: 34018]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Profilin-like
superfamily: PYP-like sensor domain (PAS domain)
family: PYP-like
domain: PYP domain of sensor histidine kinase Ppr
species: Rhodospirillum centenum [TaxId: 34018]
Probab=83.54  E-value=1.5  Score=28.02  Aligned_cols=40  Identities=23%  Similarity=0.201  Sum_probs=31.2

Q ss_pred             hCCeE-EEEcCCccEEEcChhhHhhhccc-cccCCCccceeE
Q psy7234          22 AFPWH-FIVDRKLELVQLGAGYMRLFGRC-LKHLGSSVNNYF   61 (164)
Q Consensus        22 lFPfH-ivfd~~l~I~~~G~~L~r~l~~~-~~~~g~~~~d~F   61 (164)
                      ..|+- +++|++|+|+.+-+...++++-. ....|+++.+.|
T Consensus        11 ~~p~gvi~~D~~G~I~~~N~aa~~~~G~~~eellG~~~~~~~   52 (110)
T d1mzua_          11 ALPVGAIQVDGSGVIHRYNRTESRLSGRIPERVIGRNFFTEV   52 (110)
T ss_dssp             GCSSEEEEEETTCBEEEECHHHHHHHCCCHHHHTTSBCCCCC
T ss_pred             CCCcEEEEEcCCCCEEEeHHHHHHHHcCCHHHHcCCCHHHhc
Confidence            34554 56899999999999999999644 237899987755