Psyllid ID: psy7286

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200----
Protein Sequence
MLPYSLCRLITFGLGTLYPGYASYKALKFNDTPALLHWLTYWIVSALFLTFTEIFLDLFLGFWFPFYYEIKIIFILWLIYPATRGSKFIYREFLHPMLIKCEVDIDEFVDTCTRDGFSAVSDLGWTIVDVVIKKLKEANVRQTPLYQKWNSCSIETLEDTSLQPGYPQDRGERVLREETEKSLADETSDDEILRGGCDRSRSLW
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHcccccccccHHHHccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHcHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHcccccHHHHccccccccccccccccccccccccccccccccHHHHccccccccccc
Coil and Loop (DISEMBL)
MLPYSLCRLItfglgtlypgyasykalkfndtpalLHWLTYWIVSALFLTFTEIFLDLFlgfwfpfyyEIKIIFILWLiypatrgskfiyrefLHPMLIKCEVDIDEFVdtctrdgfsavsdlGWTIVDVVIKKLKeanvrqtplyqkwnscsietledtslqpgypqdrgervlrEETEKsladetsddeilrggcdrsrslw
Flexible Loop (DISEMBL)
MLPYSLCRLITFGLGTLYPGYASYKALKFNDTPALLHWLTYWIVSALFLTFTEIFLDLFLGFWFPFYYEIKIIFILWLIYPATRGSKFIYREFLHPMLIKCEVDIDEFVDTCTRDGfsavsdlgwTIVDVVIKKLkeanvrqtplyqkwNSCSIEtledtslqpgypqdrgervlreeteksladetsddeilrggcdrsrslw
Low Complexity Region (SEG)
MLPYSLCRLITFGLGTLYPGYASYKALKFNDTPALLHWLTYWIVSALFLTFTEIFLDLFLGFWFPFYYEIKIIFILWLIYPATRGSKFIYREFLHPMLIKCEVDIDEFVDTCTRDGFSAVSDLGWTIVDVVIKKLKEANVRQTPLYQKWNSCSIETLEDTSLQPGYPQDRGERVLREETEKSLADETSDDEILRGGCDRSRSLW
Disordered region (IsUnstruct)
***YSLCRLITFGLGTLYPGYASYKALKFNDTPALLHWLTYWIVSALFLTFTEIFLDLFLGFWFPFYYEIKIIFILWLIYPATRGSKFIYREFLHPMLIKCEVDIDEFVDTCTRDGFSAVSDLGWTIVDVVIKKLKEANVRQTPLYQKWNSCSIETL***********************************************
Disordered Region (DISOPRED)
*LPYSLCRLITFGLGTLYPGYASYKALKFNDTPALLHWLTYWIVSALFLTFTEIFLDLFLGFWFPFYYEIKIIFILWLIYPATRGSKFIYREFLHPMLIKCEVDIDEFVDTCTRDGFSAVSDLGWTIVDVVIK***********************************************************************
Disordered Region (DISEMBL)
MLPYSLCRLITFGLGTLYPGYASYKALKFNDTPALLHWLTYWIVSALFLTFTEIFLDLFLGFWFPFYYEIKIIFILWLIYPATRGSKFIYREFLHPMLIKCEVDIDEFVDTCTRDGFSAVSDLGWTIVDVVIKKLKEANVRQTPLYQKWNSCSIETLEDTSLQPG************************DEILRGGCDRSRSLW
Disordered Region (DISPRO)
MLPYSLCRLITFGLGTLYPGYASYKALKFNDTPALLHWLTYWIVSALFLTFTEIFLDLFLGFWFPFYYEIKIIFILWLIYPATRGSKFIYREFLHPMLIKCEVDIDEFVDTCTRDGFSAVSDLGWTIVDVVIKKLKEANVRQTPL***********************************************************
Transmembrane Helix (TMHMM)
iiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLPYSLCRLITFGLGTLYPGYASYKALKFNDTPALLHWLTYWIVSALFLTFTEIFLDLFLGFWFPFYYEIKIIFILWLIYPATRGSKFIYREFLHPMLIKCEVDIDEFVDTCTRDGFSAVSDLGWTIVDVVIKKLKEANVRQTPLYQKWNSCSIETLEDTSLQPGYPQDRGERVLREETEKSLADETSDDEILRGGCDRSRSLW
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

No hits with e-value below 0.001 by BLAST

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	204
UNIPROTKB|Q3ZCI8	257	REEP4 "Receptor expression-enh	0.759	0.603	0.392	3.1e-28
RGD|1306561	257	Reep4 "receptor accessory prot	0.808	0.642	0.375	4.5e-27
UNIPROTKB|Q9H6H4	257	REEP4 "Receptor expression-enh	0.794	0.630	0.369	5.7e-27
WB|WBGene00020562	229	T19C3.4 [Caenorhabditis elegan	0.666	0.593	0.408	5.7e-27
MGI|MGI:1919799	257	Reep4 "receptor accessory prot	0.808	0.642	0.364	1.5e-26
UNIPROTKB|Q9H902	201	REEP1 "Receptor expression-enh	0.823	0.835	0.383	2.5e-26
MGI|MGI:1098827	201	Reep1 "receptor accessory prot	0.823	0.835	0.383	2.5e-26
UNIPROTKB|D4A193	201	Reep1 "Protein Reep1" [Rattus	0.823	0.835	0.383	2.5e-26
RGD|1305230	201	Reep1 "receptor accessory prot	0.784	0.796	0.407	3.2e-26
UNIPROTKB|A2VE59	201	REEP1 "Uncharacterized protein	0.759	0.771	0.392	4e-26

UNIPROTKB|Q3ZCI8 REEP4 "Receptor expression-enhancing protein 4" [Bos taurus (taxid:9913)]

 Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
 Identities = 62/158 (39%), Positives = 92/158 (58%)

Query:     1 MLPYSLCRLITFGLGTLYPGYASYKALKFNDTPALLHWLTYWIVSALFLTFTEIFLDLFL 60
             M+ + +CRL+    G LYP YASYKA+K  +    + W+ YWIV ALF+   E F D+F+
Sbjct:     1 MVSWMICRLVVLVFGMLYPAYASYKAVKTKNIREYVRWMMYWIVFALFMA-VETFTDIFI 59

Query:    61 GFWFPFYYEIKIIFILWLIYPATRGSKFIYREFLHPMLIKCEVDIDEFVDTCTRDGFSAV 120
               WFPFYYEIK+ F+LWL+ P TRG+  +YR+F+HP L + E +ID ++       +  V
Sbjct:    60 S-WFPFYYEIKMAFVLWLLSPYTRGASMLYRKFVHPSLSRHEKEIDTYIVQAKERSYETV 118

Query:   121 SDLGWTIVDVVIKKLKEANVR-QTPLYQKWNSCSIETL 157
                G   +++      +A  + Q  L  K  S S++ L
Sbjct:   119 LSFGKRGLNIAASAAVQAATKSQGALAGKLRSFSMQDL 156

GO:0016021 "integral to membrane" evidence=IEA

RGD|1306561 Reep4 "receptor accessory protein 4" [Rattus norvegicus (taxid:10116)]

 Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
 Identities = 65/173 (37%), Positives = 98/173 (56%)

Query:     1 MLPYSLCRLITFGLGTLYPGYASYKALKFNDTPALLHWLTYWIVSALFLTFTEIFLDLFL 60
             M+ + +CRL+    G LYP YASYKA+K  +    + W+ YWIV A+F+   E F D+F+
Sbjct:     1 MVSWMICRLVVLIFGMLYPAYASYKAVKSKNIREYVRWMMYWIVFAIFMA-AETFTDIFI 59

Query:    61 GFWFPFYYEIKIIFILWLIYPATRGSKFIYREFLHPMLIKCEVDIDEFVDTCTRDGFSAV 120
               WFPFYYEIK+ F+LWL+ P T+G+  +YR+F+HP L + E +ID  +       +  +
Sbjct:    60 S-WFPFYYEIKMAFVLWLLSPYTKGASLLYRKFVHPSLSRHEKEIDACIVQAKERSYETM 118

Query:   121 SDLGWTIVDVVIKKLKEANVR-QTPLYQKWNSCSIETLE---DTSLQPGYPQD 169
                G   +++      +A  + Q  L  +  S S++ L    DTS  P Y QD
Sbjct:   119 LSFGKRSLNMAASAAVQAATKSQGALAGRLRSFSMQDLRSIPDTSA-PTY-QD 169

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q9H6H4 REEP4 "Receptor expression-enhancing protein 4" [Homo sapiens (taxid:9606)]

 Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
 Identities = 61/165 (36%), Positives = 93/165 (56%)

Query:     1 MLPYSLCRLITFGLGTLYPGYASYKALKFNDTPALLHWLTYWIVSALFLTFTEIFLDLFL 60
             M+ + +CRL+    G L P YASYKA+K  +    + W+ YWIV ALF+   EI  D+F+
Sbjct:     1 MVSWMICRLVVLVFGMLCPAYASYKAVKTKNIREYVRWMMYWIVFALFMA-AEIVTDIFI 59

Query:    61 GFWFPFYYEIKIIFILWLIYPATRGSKFIYREFLHPMLIKCEVDIDEFVDTCTRDGFSAV 120
               WFPFYYEIK+ F+LWL+ P T+G+  +YR+F+HP L + E +ID ++       +  V
Sbjct:    60 S-WFPFYYEIKMAFVLWLLSPYTKGASLLYRKFVHPSLSRHEKEIDAYIVQAKERSYETV 118

Query:   121 SDLGWTIVDVVIKKLKEANVR-QTPLYQKWNSCSIETLEDTSLQP 164
                G   +++      +A  + Q  L  +  S S++ L   S  P
Sbjct:   119 LSFGKRGLNIAASAAVQAATKSQGALAGRLRSFSMQDLRSISDAP 163

GO:0016021 "integral to membrane" evidence=IEA

WB|WBGene00020562 T19C3.4 [Caenorhabditis elegans (taxid:6239)]

 Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
 Identities = 56/137 (40%), Positives = 87/137 (63%)

Query:     5 SLCRLITFGLGTLYPGYASYKALKFNDTPALLHWLTYWIVSALFLTFTEIFLDLFLGFWF 64
             +L RL+    GTLYP Y SYKA++  DT   + W+ YWIV A++ +F E  LDL L FWF
Sbjct:     4 TLSRLLIITAGTLYPAYRSYKAVRTKDTREYVKWMMYWIVFAIY-SFLENLLDLVLAFWF 62

Query:    65 PFYYEIKIIFILWLIYPATRGSKFIYREFLHPMLIKCEVDIDEFVDTCTRDGFSAVSDLG 124
             PFY+++KI+FI WL+ P T+G+  +YR+++HP L + E DID  +++   + ++ +  +G
Sbjct:    63 PFYFQLKIVFIFWLLSPWTKGASILYRKWVHPTLNRHEKDIDALLESAKSESYNQLMRIG 122

Query:   125 WTIVDVVIKKLKEANVR 141
                +      + EA VR
Sbjct:   123 SKSLVYAKDVVAEAAVR 139

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:1919799 Reep4 "receptor accessory protein 4" [Mus musculus (taxid:10090)]

 Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
 Identities = 63/173 (36%), Positives = 97/173 (56%)

Query:     1 MLPYSLCRLITFGLGTLYPGYASYKALKFNDTPALLHWLTYWIVSALFLTFTEIFLDLFL 60
             M+ + +CRL+    G LYP YASYKA+K  +    + W+ YWIV A+F+   E F D+F+
Sbjct:     1 MVSWMICRLVVLIFGMLYPAYASYKAVKSKNIREYVRWMMYWIVFAIFMA-AETFTDIFI 59

Query:    61 GFWFPFYYEIKIIFILWLIYPATRGSKFIYREFLHPMLIKCEVDIDEFVDTCTRDGFSAV 120
               WFPFYYE K+ F+LWL+ P T+G+  +YR+F+HP L + E +ID  +       +  +
Sbjct:    60 S-WFPFYYEFKMAFVLWLLSPYTKGASLLYRKFVHPSLSRHEKEIDACIVQAKERSYETM 118

Query:   121 SDLGWTIVDVVIKKLKEANVR-QTPLYQKWNSCSIETLE---DTSLQPGYPQD 169
                G   +++      +A  + Q  L  +  S S++ L    DT + P Y QD
Sbjct:   119 LSFGKRSLNIAASAAVQAATKSQGALAGRLRSFSMQDLRSIPDTPV-PTY-QD 169

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q9H902 REEP1 "Receptor expression-enhancing protein 1" [Homo sapiens (taxid:9606)]

 Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 66/172 (38%), Positives = 95/172 (55%)

Query:     1 MLPYSLCRLITFGLGTLYPGYASYKALKFNDTPALLHWLTYWIVSALFLTFTEIFLDLFL 60
             M+ + + RL+    GTLYP Y SYKA+K  D    + W+ YWI+ ALF T  E F D+FL
Sbjct:     1 MVSWIISRLVVLIFGTLYPAYYSYKAVKSKDIKEYVKWMMYWIIFALFTT-AETFTDIFL 59

Query:    61 GFWFPFYYEIKIIFILWLIYPATRGSKFIYREFLHPMLIKCEVDIDEFVDTCTRDGFSAV 120
               WFPFYYE+KI F+ WL+ P T+GS  +YR+F+HP L   E +ID+ +       + A+
Sbjct:    60 -CWFPFYYELKIAFVAWLLSPYTKGSSLLYRKFVHPTLSSKEKEIDDCLVQAKDRSYDAL 118

Query:   121 SDLGWTIVDVVIKK-LKEANVRQTPLYQKWNSCSIETLEDTSLQPGYPQDRG 171
                G   ++V     +  A+  Q  L ++  S S++ L  T    G P   G
Sbjct:   119 VHFGKRGLNVAATAAVMAASKGQGALSERLRSFSMQDLT-TIRGDGAPAPSG 169

GO:0008219 "cell death" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0031966 "mitochondrial membrane" evidence=IEA

GO:0016020 "membrane" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0008017 "microtubule binding" evidence=IDA

GO:0071786 "endoplasmic reticulum tubular network organization" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=IDA

GO:0031849 "olfactory receptor binding" evidence=IMP

GO:0051205 "protein insertion into membrane" evidence=IDA

MGI|MGI:1098827 Reep1 "receptor accessory protein 1" [Mus musculus (taxid:10090)]

 Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 66/172 (38%), Positives = 95/172 (55%)

Query:     1 MLPYSLCRLITFGLGTLYPGYASYKALKFNDTPALLHWLTYWIVSALFLTFTEIFLDLFL 60
             M+ + + RL+    GTLYP Y SYKA+K  D    + W+ YWI+ ALF T  E F D+FL
Sbjct:     1 MVSWIISRLVVLIFGTLYPAYYSYKAVKSKDIKEYVKWMMYWIIFALFTT-AETFTDIFL 59

Query:    61 GFWFPFYYEIKIIFILWLIYPATRGSKFIYREFLHPMLIKCEVDIDEFVDTCTRDGFSAV 120
               WFPFYYE+KI F+ WL+ P T+GS  +YR+F+HP L   E +ID+ +       + A+
Sbjct:    60 -CWFPFYYELKIAFVAWLLSPYTKGSSLLYRKFVHPTLSSKEKEIDDCLVQAKDRSYDAL 118

Query:   121 SDLGWTIVDVVIKK-LKEANVRQTPLYQKWNSCSIETLEDTSLQPGYPQDRG 171
                G   ++V     +  A+  Q  L ++  S S++ L  T    G P   G
Sbjct:   119 VHFGKRGLNVAATAAVMAASKGQGALSERLRSFSMQDLT-TIRGDGAPAPSG 169

GO:0005737 "cytoplasm" evidence=ISO

GO:0005739 "mitochondrion" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=ISO

GO:0008017 "microtubule binding" evidence=ISO

GO:0016020 "membrane" evidence=ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0031849 "olfactory receptor binding" evidence=ISO

GO:0051205 "protein insertion into membrane" evidence=ISO

GO:0071786 "endoplasmic reticulum tubular network organization" evidence=ISO

UNIPROTKB|D4A193 Reep1 "Protein Reep1" [Rattus norvegicus (taxid:10116)]

 Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 66/172 (38%), Positives = 95/172 (55%)

Query:     1 MLPYSLCRLITFGLGTLYPGYASYKALKFNDTPALLHWLTYWIVSALFLTFTEIFLDLFL 60
             M+ + + RL+    GTLYP Y SYKA+K  D    + W+ YWI+ ALF T  E F D+FL
Sbjct:     1 MVSWIISRLVVLIFGTLYPAYYSYKAVKSKDIKEYVKWMMYWIIFALFTT-AETFTDIFL 59

Query:    61 GFWFPFYYEIKIIFILWLIYPATRGSKFIYREFLHPMLIKCEVDIDEFVDTCTRDGFSAV 120
               WFPFYYE+KI F+ WL+ P T+GS  +YR+F+HP L   E +ID+ +       + A+
Sbjct:    60 -CWFPFYYELKIAFVAWLLSPYTKGSSLLYRKFVHPTLSSKEKEIDDCLVQAKDRSYDAL 118

Query:   121 SDLGWTIVDVVIKK-LKEANVRQTPLYQKWNSCSIETLEDTSLQPGYPQDRG 171
                G   ++V     +  A+  Q  L ++  S S++ L  T    G P   G
Sbjct:   119 VHFGKRGLNVAATAAVMAASKGQGALSERLRSFSMQDLT-TIRGDGAPAPSG 169

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0008017 "microtubule binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0031849 "olfactory receptor binding" evidence=IEA

GO:0051205 "protein insertion into membrane" evidence=IEA

GO:0071786 "endoplasmic reticulum tubular network organization" evidence=IEA

RGD|1305230 Reep1 "receptor accessory protein 1" [Rattus norvegicus (taxid:10116)]

 Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
 Identities = 68/167 (40%), Positives = 93/167 (55%)

Query:     6 LCRLITFGLGTLYPGYASYKALKFNDTPALLHWLTYWIVSALFLTFTEIFLDLFLGFWFP 65
             LCRLI    GTLYP Y SYKA+K  D    + W+ YWI+ ALF T  E F D+FL  WFP
Sbjct:     9 LCRLI---FGTLYPAYYSYKAVKSKDIKEYVKWMMYWIIFALFTT-AETFTDIFL-CWFP 63

Query:    66 FYYEIKIIFILWLIYPATRGSKFIYREFLHPMLIKCEVDIDEFVDTCTRDGFSAVSDLGW 125
             FYYE+KI F+ WL+ P T+GS  +YR+F+HP L   E +ID+ +       + A+   G 
Sbjct:    64 FYYELKIAFVAWLLSPYTKGSSLLYRKFVHPTLSSKEKEIDDCLVQAKDRSYDALVHFGK 123

Query:   126 TIVDVVIKK-LKEANVRQTPLYQKWNSCSIETLEDTSLQPGYPQDRG 171
               ++V     +  A+  Q  L ++  S S++ L  T    G P   G
Sbjct:   124 RGLNVAATAAVMAASKGQGALSERLRSFSMQDLT-TIRGDGAPAPSG 169

GO:0005737 "cytoplasm" evidence=ISO

GO:0005783 "endoplasmic reticulum" evidence=ISO

GO:0008017 "microtubule binding" evidence=ISO

GO:0016020 "membrane" evidence=ISO

GO:0031849 "olfactory receptor binding" evidence=ISO

GO:0051205 "protein insertion into membrane" evidence=ISO

GO:0071786 "endoplasmic reticulum tubular network organization" evidence=ISO

UNIPROTKB|A2VE59 REEP1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
 Identities = 62/158 (39%), Positives = 91/158 (57%)

Query:     1 MLPYSLCRLITFGLGTLYPGYASYKALKFNDTPALLHWLTYWIVSALFLTFTEIFLDLFL 60
             M+ + + RL+    GTLYP Y SYKA+K  D    + W+ YWI+ ALF T  E F D+FL
Sbjct:     1 MVAWIISRLVVLIFGTLYPAYYSYKAVKSKDIKEYVKWMMYWIIFALFTT-AETFTDIFL 59

Query:    61 GFWFPFYYEIKIIFILWLIYPATRGSKFIYREFLHPMLIKCEVDIDEFVDTCTRDGFSAV 120
               WFPFYYE+KI F+ WL+ P T+GS  +YR+F+HP L   E +ID+ +       + A+
Sbjct:    60 -CWFPFYYELKIAFVAWLLSPYTKGSSLLYRKFVHPTLSSKEKEIDDCLVQAKDRSYDAL 118

Query:   121 SDLGWTIVDVVIKK-LKEANVRQTPLYQKWNSCSIETL 157
                G   ++V     +  A+  Q  L ++  S S++ L
Sbjct:   119 VHFGKRGLNVAATAAVMAASKGQGALSERLRSFSMQDL 156

GO:0071786 "endoplasmic reticulum tubular network organization" evidence=IEA

GO:0051205 "protein insertion into membrane" evidence=IEA

GO:0031849 "olfactory receptor binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0008017 "microtubule binding" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	204
pfam03134	94	pfam03134, TB2_DP1_HVA22, TB2/DP1, HVA22 family	3e-31
COG5052	186	COG5052, YOP1, Protein involved in membrane traffi	5e-11

>gnl|CDD|217381 pfam03134, TB2_DP1_HVA22, TB2/DP1, HVA22 family

 Score =  109 bits (274), Expect = 3e-31
 Identities = 45/91 (49%), Positives = 64/91 (70%), Gaps = 2/91 (2%)

Query: 8  RLITFGLGTLYPGYASYKALKFNDTPALLHWLTYWIVSALFLTFTEIFLDLFLGFWFPFY 67
          RL++  +G LYP YASYKAL+  D      WLTYW+V + FLT  E F D+ L  W PFY
Sbjct: 6  RLLSNLIGFLYPAYASYKALESKDKEDDTQWLTYWVVYS-FLTLFESFSDIILS-WIPFY 63

Query: 68 YEIKIIFILWLIYPATRGSKFIYREFLHPML 98
          YE+K++F++WL+ P T+G+ +IY +F+ P+L
Sbjct: 64 YELKLLFLVWLVLPKTQGASYIYDKFIRPLL 94

This family includes members from a wide variety of eukaryotes. It includes the TB2/DP1 (deleted in polyposis) protein, which in humans is deleted in severe forms of familial adenomatous polyposis, an autosomal dominant oncological inherited disease. The family also includes the plant protein of known similarity to TB2/DP1, the HVA22 abscisic acid-induced protein, which is thought to be a regulatory protein. Length = 94

>gnl|CDD|227385 COG5052, YOP1, Protein involved in membrane traffic [Intracellular trafficking and secretion]

 Score = 59.0 bits (143), Expect = 5e-11
 Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 2/90 (2%)

Query: 9   LITFGLGTLYPGYASYKALKFNDTPALLHWLTYWIVSALFLTFTEIFLDLFLGFWFPFYY 68
           ++T   G   P   S  A    +       LTYW+V   FL+  E +    L    PFY+
Sbjct: 61  ILTNVAGFSLPAQLSLVAFYTLNFMDDTQLLTYWMVFG-FLSAIEKYSGAIL-SKVPFYW 118

Query: 69  EIKIIFILWLIYPATRGSKFIYREFLHPML 98
            +K +F+LWL+ P T G++ IY + + P +
Sbjct: 119 TLKNVFLLWLLLPRTEGARIIYDDIIAPDV 148

Length = 186

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	204
KOG1726|consensus	225		100.0
PF03134	94	TB2_DP1_HVA22: TB2/DP1, HVA22 family; InterPro: IP	99.97
KOG1725|consensus	186		99.96
COG5052	186	YOP1 Protein involved in membrane traffic [Intrace	99.85

>KOG1726|consensus

Probab=100.00  E-value=5.5e-42  Score=294.78  Aligned_cols=151  Identities=36%  Similarity=0.678  Sum_probs=144.4

Q ss_pred             HHHHHHHHHHhHhHHHHHHHHhhc--CChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHhcCCC
Q psy7286           6 LCRLITFGLGTLYPGYASYKALKF--NDTPALLHWLTYWIVSALFLTFTEIFLDLFLGFWFPFYYEIKIIFILWLIYPAT   83 (204)
Q Consensus         6 l~rll~~liG~lYPaY~S~KaLk~--~~~~e~~~WL~YWiVfa~~~~f~E~~~d~~l~~wiPfYy~lKllfliWL~~P~t   83 (204)
                      +++++++++|++||||+|||++++  ++.+++++|++||||||++++ +|+++|.++ +|+|||+++|++|++||++|.|
T Consensus         1 ~~~~lv~v~G~~yPAy~tyKavk~~~~~i~el~~W~~YWIv~A~~t~-~e~~~d~~l-sw~P~Y~e~Kl~fv~wL~~p~t   78 (225)
T KOG1726|consen    1 MIRLLVLVFGYAYPAYATYKAVKSNRKDIRELLRWMMYWIVFAALTV-FETLTDFLL-SWFPFYSEFKLAFVIWLLSPAT   78 (225)
T ss_pred             CeehHHHHHHHHhHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHH-HHHHHHHHH-HHhhhHHHHHHHHHhhcccccc
Confidence            367899999999999999999999  778899999999999999999 999999999 8999999999999999999999


Q ss_pred             CcHHHHHHHhhhhhhccChhHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccchhhhc-cccccccc
Q psy7286          84 RGSKFIYREFLHPMLIKCEVDIDEFVDTCTRDGFSAVSDLGWTIVDVVIKKLKEANVRQ-TPLYQKWN-SCSIETLE  158 (204)
Q Consensus        84 ~GA~~IY~~~I~P~L~~~E~~ID~~l~~~k~~~~~~~~~~g~~~l~~a~~~~~~~a~~~-~~~~~~~~-~~s~~~~~  158 (204)
                      +|+.+||++|+||++++||++||+++.++|++.++++++++++++|++...+.+++.+. +.+++|++ +++|+|+.
T Consensus        79 ~G~~~vY~~f~~p~ls~~E~eid~~l~~~k~~~~~~a~~~~~r~l~~~~~~~~~a~~~~~~~~tp~~~~~~~~~~~~  155 (225)
T KOG1726|consen   79 KGASYVYRKFLRPFLSKHEEEIDRMLVEAKERVYDAAVSILKRALNYAQTYALEAAVFSQGQLTPRLQRSSSDQDLT  155 (225)
T ss_pred             CccHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccchhhhhhhh
Confidence            99999999999999999999999999999999999999999999999999999999996 58899975 99998774

>PF03134 TB2_DP1_HVA22: TB2/DP1, HVA22 family; InterPro: IPR004345 This family includes members from a wide variety of eukaryotes

Probab=99.97  E-value=2.8e-30  Score=193.98  Aligned_cols=93  Identities=48%  Similarity=1.008  Sum_probs=90.3

Q ss_pred             hhHHHHHHHHHHhHhHHHHHHHHhhcCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHhcCCC
Q psy7286           4 YSLCRLITFGLGTLYPGYASYKALKFNDTPALLHWLTYWIVSALFLTFTEIFLDLFLGFWFPFYYEIKIIFILWLIYPAT   83 (204)
Q Consensus         4 ~~l~rll~~liG~lYPaY~S~KaLk~~~~~e~~~WL~YWiVfa~~~~f~E~~~d~~l~~wiPfYy~lKllfliWL~~P~t   83 (204)
                      +++++++++++|++||+|+|+|+++++++++.++||+||+++|++++ +|.+++.++ +|+|+|+++|++|++||.+|++
T Consensus         2 ~~~~~~l~~~i~~~yP~~~s~kal~~~~~~~~~~wL~YWiv~~~~~~-~e~~~~~~l-~~iP~y~~~K~~~~~wL~~p~~   79 (94)
T PF03134_consen    2 GFIARLLCNLIGILYPAYKSFKALKSKDKKDLKQWLTYWIVYGLFTL-FESFLDFIL-SWIPFYYEFKLLFLVWLQLPQF   79 (94)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHH-ccCchHHHHHHHHHHHHHcCCC
Confidence            57889999999999999999999999999999999999999999999 999999999 8999999999999999999999


Q ss_pred             CcHHHHHHHhhhhhh
Q psy7286          84 RGSKFIYREFLHPML   98 (204)
Q Consensus        84 ~GA~~IY~~~I~P~L   98 (204)
                      +||+++|+++++|++
T Consensus        80 ~Ga~~iy~~~i~P~~   94 (94)
T PF03134_consen   80 QGAEYIYDKFIRPFL   94 (94)
T ss_pred             CcHHHHHHHHccccC
Confidence            999999999999975

It includes the TB2/DP1 (deleted in polyposis) protein which in human is deleted in severe forms of familial adenomatous polyposis, an autosomal dominant oncological inherited disease. The family also includes the plant protein of known similarity to TB2/DP1, the HVA22 abscisic acid-induced protein (e.g. Q07764 from SWISSPROT), which is thought to be a regulatory protein.

>KOG1725|consensus

Probab=99.96  E-value=2e-29  Score=211.97  Aligned_cols=109  Identities=38%  Similarity=0.709  Sum_probs=102.4

Q ss_pred             chhhHHHHHHHHHHhHhHHHHHHHHhhcCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHhcC
Q psy7286           2 LPYSLCRLITFGLGTLYPGYASYKALKFNDTPALLHWLTYWIVSALFLTFTEIFLDLFLGFWFPFYYEIKIIFILWLIYP   81 (204)
Q Consensus         2 ~~~~l~rll~~liG~lYPaY~S~KaLk~~~~~e~~~WL~YWiVfa~~~~f~E~~~d~~l~~wiPfYy~lKllfliWL~~P   81 (204)
                      +...+.+++|+++|++||+|+|++|++++++.|+++||+||+|||++++ +|.+.+.++ +|+|+||++|++|++||++|
T Consensus        53 ~~g~~~~l~cn~ig~~yP~y~Sv~aIes~~k~dD~~wL~YWivys~lsl-ie~~~~~il-~~iP~y~~~K~~fl~~l~lP  130 (186)
T KOG1725|consen   53 LFGSGGPLLCNLIGFLYPAYASVKAIESPSKDDDTQWLTYWIVYSILSL-VEFFSVAIL-SWIPFYWYAKLIFLLWLVLP  130 (186)
T ss_pred             HhcccHHHHHHHHHHHHHHHHHHHhhhCCCCcchHHHHHHHHHHHHHHH-HHHHHHHHH-HhchHHHHHHHHHHHHHhcc
Confidence            3445678999999999999999999999999999999999999999999 999999999 99999999999999999999


Q ss_pred             CCCcHHHHHHHhhhhhhccChhHHHHHHHHh
Q psy7286          82 ATRGSKFIYREFLHPMLIKCEVDIDEFVDTC  112 (204)
Q Consensus        82 ~t~GA~~IY~~~I~P~L~~~E~~ID~~l~~~  112 (204)
                      +++||.+||+++++|++.++..++|+..+..
T Consensus       131 ~~~Ga~~iY~~~vrp~~~~~~~~~~~~~~~~  161 (186)
T KOG1725|consen  131 QFNGAAIIYNHIVRPFFLKHSREIDDIEDAN  161 (186)
T ss_pred             CCCCceeeechhhhhhhhhhhhhhhhhhhcc
Confidence            9999999999999999999999999776643

>COG5052 YOP1 Protein involved in membrane traffic [Intracellular trafficking and secretion]

Probab=99.85  E-value=5.4e-21  Score=159.61  Aligned_cols=103  Identities=28%  Similarity=0.498  Sum_probs=95.6

Q ss_pred             HHHHHHHhHhHHHHHHHHhhcCChhhhhhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHhcCCCCcHHH
Q psy7286           9 LITFGLGTLYPGYASYKALKFNDTPALLHWLTYWIVSALFLTFTEIFLDLFLGFWFPFYYEIKIIFILWLIYPATRGSKF   88 (204)
Q Consensus         9 ll~~liG~lYPaY~S~KaLk~~~~~e~~~WL~YWiVfa~~~~f~E~~~d~~l~~wiPfYy~lKllfliWL~~P~t~GA~~   88 (204)
                      ++.++.|+..|++.|.+++++.+..+.+|||+||+|+++.++ +|.+...++ +|+||||..|.+|++|+..|+|+||..
T Consensus        61 ilt~~~~~~lP~~~~l~a~~~~n~~dd~q~l~ywmV~~~lsa-ie~~s~~il-~~vP~Y~~~K~vFllw~~~prt~GA~~  138 (186)
T COG5052          61 ILTNVAGFSLPAQLSLVAFYTLNFMDDTQLLTYWMVFGFLSA-IEKYSGAIL-SKVPFYWTLKNVFLLWLLLPRTEGARI  138 (186)
T ss_pred             HHHHHHHHHccHHHHHHHHHcCCchhhHHHHHHHHHHHHHHH-HHHHHHHHH-HHhhHHHHHHHHHHHHHhccccCceee
Confidence            778899999999999999999999999999999999999999 999999999 999999999999999999999999999


Q ss_pred             HHHHhhhhhhccChhH-HHHHHHHhh
Q psy7286          89 IYREFLHPMLIKCEVD-IDEFVDTCT  113 (204)
Q Consensus        89 IY~~~I~P~L~~~E~~-ID~~l~~~k  113 (204)
                      ||++++.|++++|--+ ||+.+.+..
T Consensus       139 IY~~~i~p~~s~~~~~~IektV~~~~  164 (186)
T COG5052         139 IYDDIIAPDVSDHGFRTIEKTVKNGT  164 (186)
T ss_pred             eHHhhccccccHHHHHHHHHHHHhhc
Confidence            9999999999998765 666555443

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00