Psyllid ID: psy7433
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 213 | 2.2.26 [Sep-21-2011] | |||||||
| Q8TDJ6 | 3036 | DmX-like protein 2 OS=Hom | yes | N/A | 0.840 | 0.058 | 0.470 | 3e-54 | |
| Q9Y485 | 3027 | DmX-like protein 1 OS=Hom | no | N/A | 0.845 | 0.059 | 0.492 | 2e-53 | |
| Q6PNC0 | 3013 | DmX-like protein 1 OS=Mus | yes | N/A | 0.845 | 0.059 | 0.497 | 7e-53 | |
| Q8BPN8 | 3032 | DmX-like protein 2 OS=Mus | no | N/A | 0.835 | 0.058 | 0.467 | 8e-52 | |
| D3ZW91 | 477 | POC1 centriolar protein h | yes | N/A | 0.713 | 0.318 | 0.268 | 2e-08 | |
| Q8BHD1 | 476 | POC1 centriolar protein h | no | N/A | 0.718 | 0.321 | 0.261 | 6e-08 | |
| P87053 | 605 | F-box/WD repeat-containin | yes | N/A | 0.835 | 0.294 | 0.266 | 1e-07 | |
| O13615 | 473 | Pre-mRNA-splicing factor | no | N/A | 0.723 | 0.325 | 0.259 | 2e-07 | |
| Q7ZUV2 | 694 | Katanin p80 WD40 repeat-c | no | N/A | 0.760 | 0.233 | 0.243 | 3e-07 | |
| Q12417 | 451 | Pre-mRNA-splicing factor | yes | N/A | 0.600 | 0.283 | 0.270 | 4e-07 |
| >sp|Q8TDJ6|DMXL2_HUMAN DmX-like protein 2 OS=Homo sapiens GN=DMXL2 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 211 bits (536), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 139/204 (68%), Gaps = 25/204 (12%)
Query: 1 MTYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASS 60
M++QCH+K TSDF F+ S SLVAT+GHS++++NVCLWD+L+ +L+ F CHD GA+
Sbjct: 2846 MSWQCHSKATSDFAFITSSSLVATSGHSNDNRNVCLWDTLISPGNSLIHGFTCHDHGATV 2905
Query: 61 LVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGD 120
L +AP+ QLLIS G+KG +C+ D+RQR + F AH+S +K LA+DP+EE+F T
Sbjct: 2906 LQYAPKQQLLISGGRKGHVCIFDIRQRQLIHTFQAHDSAIKALALDPYEEYFTT------ 2959
Query: 121 IKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQL 180
G+ +G+IKVW L+G+ L+++F EHA+ S F++IG GV Q+
Sbjct: 2960 -------------------GSAEGNIKVWRLTGHGLIHSFKSEHAKQSIFRNIGAGVMQI 3000
Query: 181 HVDGGSRLFSCGADGSMKVRQLPD 204
+ G+RLFSCGADG++K R LP+
Sbjct: 3001 DIIQGNRLFSCGADGTLKTRVLPN 3024
|
May serve as a scaffold protein for MADD and RAB3GA on synaptic vesicles. Homo sapiens (taxid: 9606) |
| >sp|Q9Y485|DMXL1_HUMAN DmX-like protein 1 OS=Homo sapiens GN=DMXL1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 208 bits (530), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 101/205 (49%), Positives = 135/205 (65%), Gaps = 25/205 (12%)
Query: 1 MTYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASS 60
+T+QCHNK +DFVF+ S SL+ATAG S++++NVCLWD+L+ +LV AF CHD GA+
Sbjct: 2832 LTWQCHNKTANDFVFVSSSSLIATAGLSTDNRNVCLWDTLVAPANSLVHAFTCHDSGATV 2891
Query: 61 LVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGD 120
L +AP+HQLLIS G+KG V DL QR R F +H+SPVK +A+DP EE+FVT
Sbjct: 2892 LAYAPKHQLLISGGRKGFTYVFDLCQRQQRQLFQSHDSPVKAVAVDPTEEYFVT------ 2945
Query: 121 IKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQL 180
G+ +G+IK+WSLS LL+ F EHAR S F++IG GV Q+
Sbjct: 2946 -------------------GSAEGNIKIWSLSTFGLLHTFVSEHARQSIFRNIGTGVMQI 2986
Query: 181 HVDGGSRLFSCGADGSMKVRQLPDR 205
+ +FSCGADG+MK+R LPD+
Sbjct: 2987 ETGPANHIFSCGADGTMKMRILPDQ 3011
|
Homo sapiens (taxid: 9606) |
| >sp|Q6PNC0|DMXL1_MOUSE DmX-like protein 1 OS=Mus musculus GN=Dmxl1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 206 bits (525), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 102/205 (49%), Positives = 136/205 (66%), Gaps = 25/205 (12%)
Query: 1 MTYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASS 60
+ +QCHNK +DFVF+ S SL+ATAG SS+++N+CLWD+L+ +LV AF CHD GA+
Sbjct: 2818 LAWQCHNKTANDFVFVSSSSLIATAGLSSDNRNICLWDTLVAPANSLVHAFTCHDSGATV 2877
Query: 61 LVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGD 120
L +AP+HQLLIS G+KG C+ DLRQR R F +H+SPVK +AIDP EE+FVT
Sbjct: 2878 LAYAPKHQLLISGGRKGFTCIFDLRQRQQRQLFQSHDSPVKAIAIDPTEEYFVT------ 2931
Query: 121 IKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQL 180
G+ +G+IK+WSLS LL+ F EHAR S F++IG GV Q+
Sbjct: 2932 -------------------GSAEGNIKIWSLSSFSLLHTFINEHARQSIFRNIGTGVMQI 2972
Query: 181 HVDGGSRLFSCGADGSMKVRQLPDR 205
+ +FSCGADG+MK+R LPD+
Sbjct: 2973 ETGPANHIFSCGADGTMKMRILPDQ 2997
|
Mus musculus (taxid: 10090) |
| >sp|Q8BPN8|DMXL2_MOUSE DmX-like protein 2 OS=Mus musculus GN=Dmxl2 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 203 bits (516), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 95/203 (46%), Positives = 135/203 (66%), Gaps = 25/203 (12%)
Query: 1 MTYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASS 60
M++QCH+K TSDF F+ S SLVAT+GHS++++NVCLWD+L+ +L+ F CHD GA+
Sbjct: 2842 MSWQCHSKATSDFAFITSSSLVATSGHSNDNRNVCLWDTLISPGNSLIHGFTCHDHGATV 2901
Query: 61 LVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGD 120
L +AP+ QLLIS G+KG IC+ D+RQR + F AH+S +K LA+D EE+F T
Sbjct: 2902 LQYAPKQQLLISGGRKGYICIFDIRQRQLIHTFQAHDSAIKALALDSCEEYFTT------ 2955
Query: 121 IKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQL 180
G+ +G+IKVW L+G+ L+++F EHA+ S F++IG GV Q+
Sbjct: 2956 -------------------GSAEGNIKVWRLTGHGLIHSFKSEHAKQSIFRNIGAGVMQI 2996
Query: 181 HVDGGSRLFSCGADGSMKVRQLP 203
+ +RLFSCGADG++K R LP
Sbjct: 2997 AISQDNRLFSCGADGTLKTRVLP 3019
|
May serve as a scaffold protein for MADD and RAB3GA on synaptic vesicles. Mus musculus (taxid: 10090) |
| >sp|D3ZW91|POC1B_RAT POC1 centriolar protein homolog B OS=Rattus norvegicus GN=Poc1b PE=2 SV=1 | Back alignment and function description |
|---|
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 73/175 (41%), Gaps = 23/175 (13%)
Query: 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLV 62
++ H + F +C +ATA S + LW SL P +A +V H +SL
Sbjct: 14 FKGHKAAITSADFSPNCKQIATA---SWDTFLMLW-SLKPHARAY--RYVGHKDVVTSLQ 67
Query: 63 FAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122
F+PQ LL SA + + + L ++ S F AH +PV+ + +F VT + D IK
Sbjct: 68 FSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSIK 127
Query: 123 -----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNF 160
V+C P V+ + D IK+W + + NF
Sbjct: 128 VWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNF 182
|
Involved in early steps of centriole duplication, as well as in the later steps of centriole length control. Required for ciliogenesis. Rattus norvegicus (taxid: 10116) |
| >sp|Q8BHD1|POC1B_MOUSE POC1 centriolar protein homolog B OS=Mus musculus GN=Poc1b PE=1 SV=1 | Back alignment and function description |
|---|
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 73/176 (41%), Gaps = 23/176 (13%)
Query: 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSL 61
+++ H + F +C +ATA S + LW SL P +A +V H +SL
Sbjct: 13 SFKGHKAAITSADFSPNCKQIATA---SWDTFLMLW-SLKPHARAY--RYVGHKDVVTSL 66
Query: 62 VFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI 121
F+PQ LL SA + + + L ++ S F AH +PV+ + + VT + D I
Sbjct: 67 QFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSI 126
Query: 122 K-----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNF 160
K V+C P V+ + D IK+W + + NF
Sbjct: 127 KVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF 182
|
Required for ciliogenesis. Mus musculus (taxid: 10090) |
| >sp|P87053|POF1_SCHPO F-box/WD repeat-containing protein pof1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pof1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 86/229 (37%), Gaps = 51/229 (22%)
Query: 17 GSCSLVATAGHS----------------SESKNVCLWDSLLPQKKALVQAFVCHDQGASS 60
G C V +GHS S + LW+ Q+ AL++ H G +
Sbjct: 262 GRCRQVVLSGHSDGVMCLQLVRNILASGSYDATIRLWNLATFQQVALLEG---HSSGVTC 318
Query: 61 LVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGD 120
L F LIS I + + R S + H V CL D V+G+ D
Sbjct: 319 LQF--DQCKLISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTFD--STLLVSGSADCT 374
Query: 121 IK----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEH 164
+K PV + I ++G+ D IK+WSL N L+ F
Sbjct: 375 VKLWHFSGGKRITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSA-- 432
Query: 165 ARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDAVVHTLY 213
HIG Q SRLFSC DG++K + ++ VHTL+
Sbjct: 433 -------HIGP--VQSLALADSRLFSCSLDGTIKQWDI-EKKKCVHTLF 471
|
Probably recognizes and binds to some phosphorylated proteins and promotes their ubiquitination and degradation. Required for the inactivation of zip1 via ubiquitination. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) |
| >sp|O13615|PRP46_SCHPO Pre-mRNA-splicing factor prp5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=prp5 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 77/185 (41%), Gaps = 31/185 (16%)
Query: 30 ESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVI 89
E K V WD + +++ + H G +L P +L++AG+ V D+R R
Sbjct: 225 EDKMVKCWDL---ETNKVIRHYHGHLSGVYALKLHPTLDVLVTAGRDAVARVWDMRTRQN 281
Query: 90 RSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI-----------------KSPVKCLAIDP 132
+ H+S V LA+ + VTG+ D I K V+ L++ P
Sbjct: 282 VHVLSGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDLAAGKTLTTLTHHKKTVRALSLHP 341
Query: 133 HEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCG 192
E F +G+ D +IK W + NF G +A V L ++ + +FS
Sbjct: 342 DEFTFASGSSD-NIKHWKFPEGAFMGNFEGHNAI----------VNTLSINSDNVMFSGA 390
Query: 193 ADGSM 197
+GSM
Sbjct: 391 DNGSM 395
|
Required for both cell cycle progression at G2/M and pre-mRNA splicing. Interacts genetically with the PRP4 kinase. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) |
| >sp|Q7ZUV2|KTNB1_DANRE Katanin p80 WD40 repeat-containing subunit B1 OS=Danio rerio GN=katnb1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 84/197 (42%), Gaps = 35/197 (17%)
Query: 29 SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRV 88
S S ++ LWD + +++ + H SSL F P + L S +I + D+R++
Sbjct: 82 SLSGSLRLWDL---EAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKG 138
Query: 89 IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAID 131
R+ H V+CLA P ++ + + D +K S V +
Sbjct: 139 CVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFH 198
Query: 132 PHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEH--ARSSFFKHIGQGVTQLHVDGGSRLF 189
P+E +G+ D +K+W L +++ + GE RS F GS L+
Sbjct: 199 PNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFN-----------PDGSCLY 247
Query: 190 SCGADGSMKVRQL-PDR 205
S G++ +++V PDR
Sbjct: 248 S-GSENTLRVYGWEPDR 263
|
Participates in a complex which severs microtubules in an ATP-dependent manner. May act to target the enzymatic subunit of this complex to sites of action such as the centrosome. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. Danio rerio (taxid: 7955) |
| >sp|Q12417|PRP46_YEAST Pre-mRNA-splicing factor PRP46 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PRP46 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 27/155 (17%)
Query: 29 SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRV 88
SE K V WD +K +++ + H G ++ P L+ +AG+ I + D+R R+
Sbjct: 201 SEDKTVKCWDL---EKNQIIRDYYGHLSGVRTVSIHPTLDLIATAGRDSVIKLWDMRTRI 257
Query: 89 IRSRFNAHESP---VKCLAIDPHEEFFVTGAGDGDI-----------------KSPVKCL 128
H+ P V+C +DP V+ + D + K V+
Sbjct: 258 PVITLVGHKGPINQVQCTPVDPQ---VVSSSTDATVRLWDVVAGKTMKVLTHHKRSVRAT 314
Query: 129 AIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGE 163
A+ P +EF V A DI+ W L+ LL NF E
Sbjct: 315 ALHP-KEFSVASACTDDIRSWGLAEGSLLTNFESE 348
|
Involved in pre-mRNA splicing. May also be required for cell cycle progression at G2/M. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 213 | ||||||
| 170045722 | 3407 | rabconnectin [Culex quinquefasciatus] gi | 0.877 | 0.054 | 0.702 | 2e-82 | |
| 242016272 | 3332 | rabconnectin, putative [Pediculus humanu | 0.877 | 0.056 | 0.669 | 2e-81 | |
| 157113444 | 3324 | rabconnectin [Aedes aegypti] gi|10887771 | 0.877 | 0.056 | 0.698 | 2e-81 | |
| 158293116 | 3521 | AGAP010490-PA [Anopheles gambiae str. PE | 0.877 | 0.053 | 0.693 | 1e-80 | |
| 322787403 | 1599 | hypothetical protein SINV_00907 [Solenop | 0.877 | 0.116 | 0.669 | 9e-76 | |
| 3096961 | 3512 | CPY [Chironomus thummi] | 0.868 | 0.052 | 0.632 | 9e-76 | |
| 332022080 | 3374 | DmX-like protein 2 [Acromyrmex echinatio | 0.877 | 0.055 | 0.669 | 1e-75 | |
| 350417854 | 3370 | PREDICTED: dmX-like protein 2-like [Bomb | 0.873 | 0.055 | 0.668 | 7e-75 | |
| 328791656 | 3364 | PREDICTED: LOW QUALITY PROTEIN: rabconne | 0.873 | 0.055 | 0.668 | 8e-75 | |
| 380017047 | 3308 | PREDICTED: LOW QUALITY PROTEIN: dmX-like | 0.873 | 0.056 | 0.668 | 8e-75 |
| >gi|170045722|ref|XP_001850447.1| rabconnectin [Culex quinquefasciatus] gi|167868657|gb|EDS32040.1| rabconnectin [Culex quinquefasciatus] | Back alignment and taxonomy information |
|---|
Score = 311 bits (796), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 149/212 (70%), Positives = 168/212 (79%), Gaps = 25/212 (11%)
Query: 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSL 61
TYQCHNK +DFVFLGSCSLVATAGHSSESKNV +WD+LLPQKKALV AF CHDQGASSL
Sbjct: 3221 TYQCHNKGITDFVFLGSCSLVATAGHSSESKNVAIWDTLLPQKKALVSAFTCHDQGASSL 3280
Query: 62 VFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI 121
+APQHQLLISAGKKGD+C+ D+RQRV+R RF AHE+ +KCLAIDPHEE FVTG
Sbjct: 3281 AYAPQHQLLISAGKKGDVCIFDVRQRVLRHRFQAHENAIKCLAIDPHEEHFVTG------ 3334
Query: 122 KSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLH 181
+ DGDIKVW L+ + LLY+F GEHARSSFFKHIGQGVTQL
Sbjct: 3335 -------------------SADGDIKVWGLTVHTLLYSFMGEHARSSFFKHIGQGVTQLQ 3375
Query: 182 VDGGSRLFSCGADGSMKVRQLPDRDAVVHTLY 213
+D G RLFSCGADGSMKVRQLPDR+++VH+LY
Sbjct: 3376 IDQGGRLFSCGADGSMKVRQLPDRESIVHSLY 3407
|
Source: Culex quinquefasciatus Species: Culex quinquefasciatus Genus: Culex Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|242016272|ref|XP_002428753.1| rabconnectin, putative [Pediculus humanus corporis] gi|212513438|gb|EEB16015.1| rabconnectin, putative [Pediculus humanus corporis] | Back alignment and taxonomy information |
|---|
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 144/215 (66%), Positives = 170/215 (79%), Gaps = 28/215 (13%)
Query: 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSL 61
+YQCHNK+TSDFVFLGSCS+VATAGHSSESKNV +WDSLLP+KKA+V AF+CH+QGASSL
Sbjct: 3129 SYQCHNKVTSDFVFLGSCSMVATAGHSSESKNVAIWDSLLPKKKAMVAAFICHEQGASSL 3188
Query: 62 VFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI 121
V APQHQ +ISAGKKGD+C+ D+RQR +R +F AHES +KCLA+DP EEFFVTG+
Sbjct: 3189 VLAPQHQYVISAGKKGDVCIFDVRQRTLRLKFQAHESAIKCLAVDPMEEFFVTGS----- 3243
Query: 122 KSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSG---NHLLYNFPGEHARSSFFKHIGQGVT 178
DGDIK+WSL+ +H LY+FPGEHARSSFFK++G GVT
Sbjct: 3244 --------------------ADGDIKIWSLANTNSSHTLYSFPGEHARSSFFKNVGPGVT 3283
Query: 179 QLHVDGGSRLFSCGADGSMKVRQLPDRDAVVHTLY 213
QL+VD GSRLFSCGADGSMKVRQLPDRD +V +LY
Sbjct: 3284 QLYVDSGSRLFSCGADGSMKVRQLPDRDTIVQSLY 3318
|
Source: Pediculus humanus corporis Species: Pediculus humanus Genus: Pediculus Family: Pediculidae Order: Phthiraptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|157113444|ref|XP_001657831.1| rabconnectin [Aedes aegypti] gi|108877718|gb|EAT41943.1| AAEL006472-PA, partial [Aedes aegypti] | Back alignment and taxonomy information |
|---|
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 148/212 (69%), Positives = 165/212 (77%), Gaps = 25/212 (11%)
Query: 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSL 61
TY CHNK +DFVFLGSCSLVATAGHSSESKNV +WD+LLPQKKALV AF CHDQGASSL
Sbjct: 3138 TYLCHNKGITDFVFLGSCSLVATAGHSSESKNVAIWDTLLPQKKALVSAFTCHDQGASSL 3197
Query: 62 VFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI 121
+APQHQLLISAGKKGDIC+ D+RQRV+R RF AHE+P+KCLAIDPHEE FVTG
Sbjct: 3198 AYAPQHQLLISAGKKGDICIFDVRQRVLRHRFQAHENPIKCLAIDPHEEHFVTG------ 3251
Query: 122 KSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLH 181
+ DGDIKVW L+ + LLY F GEHARSSFFKHIGQGVTQL
Sbjct: 3252 -------------------SADGDIKVWGLTVHTLLYTFQGEHARSSFFKHIGQGVTQLQ 3292
Query: 182 VDGGSRLFSCGADGSMKVRQLPDRDAVVHTLY 213
+D G RLFSCGADGSMKVR LPDR+++V +LY
Sbjct: 3293 IDQGGRLFSCGADGSMKVRLLPDRESIVRSLY 3324
|
Source: Aedes aegypti Species: Aedes aegypti Genus: Aedes Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|158293116|ref|XP_558026.3| AGAP010490-PA [Anopheles gambiae str. PEST] gi|157016804|gb|EAL40333.3| AGAP010490-PA [Anopheles gambiae str. PEST] | Back alignment and taxonomy information |
|---|
Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 147/212 (69%), Positives = 166/212 (78%), Gaps = 25/212 (11%)
Query: 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSL 61
TYQCHNK +DFVFLGSCSLVATAGHSSESKNV +WD+LLPQKKALV AF CHDQGASSL
Sbjct: 3335 TYQCHNKGITDFVFLGSCSLVATAGHSSESKNVAIWDTLLPQKKALVAAFTCHDQGASSL 3394
Query: 62 VFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI 121
+APQHQLLISAGKKGD+ + D+RQR++R RF AHE P+KCLAIDP+EE FVTG
Sbjct: 3395 AYAPQHQLLISAGKKGDVSIFDVRQRILRHRFQAHEHPIKCLAIDPNEEQFVTG------ 3448
Query: 122 KSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLH 181
+ DGDIKVW LS + LY+F GEHARSSFFKHIGQGVTQL
Sbjct: 3449 -------------------SADGDIKVWGLSIHTQLYSFMGEHARSSFFKHIGQGVTQLQ 3489
Query: 182 VDGGSRLFSCGADGSMKVRQLPDRDAVVHTLY 213
+D G RLFSCGADGSMKVRQLPDR+++VH+LY
Sbjct: 3490 IDQGGRLFSCGADGSMKVRQLPDRESIVHSLY 3521
|
Source: Anopheles gambiae str. PEST Species: Anopheles gambiae Genus: Anopheles Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|322787403|gb|EFZ13491.1| hypothetical protein SINV_00907 [Solenopsis invicta] | Back alignment and taxonomy information |
|---|
Score = 288 bits (737), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 163/212 (76%), Gaps = 25/212 (11%)
Query: 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSL 61
TYQCH+K+TSDFVFLG+CSLVATAGH SE +NV LWD+LLPQ K+LVQ F+CHDQGAS+L
Sbjct: 1413 TYQCHSKVTSDFVFLGACSLVATAGHGSEGRNVALWDTLLPQNKSLVQGFMCHDQGASAL 1472
Query: 62 VFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI 121
+ APQHQLLIS GKKGDI + D+RQR R RF AHES +KCLA+DPHEEFFV+GAG
Sbjct: 1473 ILAPQHQLLISGGKKGDINIFDVRQRQQRQRFQAHESAIKCLALDPHEEFFVSGAG---- 1528
Query: 122 KSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLH 181
DGDIK+W L+ + LLY+FP EH RSSFFK+IGQGVTQLH
Sbjct: 1529 ---------------------DGDIKIWGLTVHSLLYSFPSEHPRSSFFKNIGQGVTQLH 1567
Query: 182 VDGGSRLFSCGADGSMKVRQLPDRDAVVHTLY 213
VD RLFSCGADGSMKVRQLP+RD V+ TLY
Sbjct: 1568 VDSAGRLFSCGADGSMKVRQLPERDCVIQTLY 1599
|
Source: Solenopsis invicta Species: Solenopsis invicta Genus: Solenopsis Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|3096961|emb|CAA57760.1| CPY [Chironomus thummi] | Back alignment and taxonomy information |
|---|
Score = 288 bits (737), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 134/212 (63%), Positives = 161/212 (75%), Gaps = 27/212 (12%)
Query: 4 QCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVF 63
+CHNK+ SDFVFLGSCSLVATAGHSSESKNV +WD+LLPQKKALVQ+F CHDQGASSLV+
Sbjct: 3326 ECHNKLISDFVFLGSCSLVATAGHSSESKNVAIWDTLLPQKKALVQSFACHDQGASSLVY 3385
Query: 64 APQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIKS 123
APQHQLLISAGKKGD+C+ D+RQR +R RF AH++ +KCLA+DPHEE F+TG
Sbjct: 3386 APQHQLLISAGKKGDVCIFDIRQRTLRHRFQAHDTAIKCLAVDPHEEIFITG-------- 3437
Query: 124 PVKCLAIDPHEEFFVTGAGDGDIKVWSLSG--NHLLYNFPGEHARSSFFKHIGQGVTQLH 181
+ DGDIK+W+L + L+ +PGEH SSFFKH GQGVTQ+H
Sbjct: 3438 -----------------SADGDIKIWALPAPISTPLFYYPGEHKHSSFFKHTGQGVTQIH 3480
Query: 182 VDGGSRLFSCGADGSMKVRQLPDRDAVVHTLY 213
+D RLFSCGADGSMK+R LPDRD +V+ +Y
Sbjct: 3481 IDQFGRLFSCGADGSMKIRSLPDRDTIVNAIY 3512
|
Source: Chironomus thummi Species: Chironomus thummi Genus: Chironomus Family: Chironomidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|332022080|gb|EGI62405.1| DmX-like protein 2 [Acromyrmex echinatior] | Back alignment and taxonomy information |
|---|
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 163/212 (76%), Gaps = 25/212 (11%)
Query: 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSL 61
TYQCH+K+TSDFVFLG+CSLVATAGH SE +NV LWD+LLPQ K+LVQ F+CHDQGAS+L
Sbjct: 3188 TYQCHSKVTSDFVFLGACSLVATAGHGSEGRNVALWDTLLPQNKSLVQGFMCHDQGASAL 3247
Query: 62 VFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI 121
+ APQHQLLIS GKKGDI + D+RQR R RF AHES +KCLA+DPHEEFFV+GAG
Sbjct: 3248 ILAPQHQLLISGGKKGDINIFDVRQRQQRQRFQAHESAIKCLALDPHEEFFVSGAG---- 3303
Query: 122 KSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLH 181
DGDIK+W L+ + LLY+FP EH RSSFFK+IGQGVTQLH
Sbjct: 3304 ---------------------DGDIKIWGLTVHSLLYSFPSEHPRSSFFKNIGQGVTQLH 3342
Query: 182 VDGGSRLFSCGADGSMKVRQLPDRDAVVHTLY 213
VD RLFSCGADGSMKVRQLP+RD V+ TLY
Sbjct: 3343 VDSAGRLFSCGADGSMKVRQLPERDCVIQTLY 3374
|
Source: Acromyrmex echinatior Species: Acromyrmex echinatior Genus: Acromyrmex Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|350417854|ref|XP_003491612.1| PREDICTED: dmX-like protein 2-like [Bombus impatiens] | Back alignment and taxonomy information |
|---|
Score = 285 bits (730), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 141/211 (66%), Positives = 163/211 (77%), Gaps = 25/211 (11%)
Query: 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLV 62
YQCH+K+T+DFVFLG+CSL+ATAGH SE +NV LWD+LLPQ K+L+Q F CH+QGASSL+
Sbjct: 3185 YQCHSKVTADFVFLGACSLIATAGHGSEGRNVALWDTLLPQNKSLIQGFTCHEQGASSLI 3244
Query: 63 FAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122
APQHQLLIS GKKGDI + D+RQR R RF AHES +KCLA+DPHEEFFV+GAG
Sbjct: 3245 LAPQHQLLISGGKKGDINIFDVRQRQQRHRFQAHESAIKCLALDPHEEFFVSGAG----- 3299
Query: 123 SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHV 182
DGDIK+W L+ + LLY+FPGEH RSSFFK+IGQGVTQLHV
Sbjct: 3300 --------------------DGDIKIWGLTVHSLLYSFPGEHPRSSFFKNIGQGVTQLHV 3339
Query: 183 DGGSRLFSCGADGSMKVRQLPDRDAVVHTLY 213
D RLFSCGADGSMKVRQLP+RD VVHTLY
Sbjct: 3340 DSAGRLFSCGADGSMKVRQLPERDCVVHTLY 3370
|
Source: Bombus impatiens Species: Bombus impatiens Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|328791656|ref|XP_003251609.1| PREDICTED: LOW QUALITY PROTEIN: rabconnectin-3A [Apis mellifera] | Back alignment and taxonomy information |
|---|
Score = 285 bits (729), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 141/211 (66%), Positives = 163/211 (77%), Gaps = 25/211 (11%)
Query: 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLV 62
YQCH+K+T+DFVFLG+CSL+ATAGH SE +NV LWD+LLPQ K+L+Q F CH+QGASSL+
Sbjct: 3179 YQCHSKVTADFVFLGACSLIATAGHGSEGRNVALWDTLLPQNKSLIQGFTCHEQGASSLI 3238
Query: 63 FAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122
APQHQLLIS GKKGDI + D+RQR R RF AHES +KCLA+DPHEEFFV+GAG
Sbjct: 3239 LAPQHQLLISGGKKGDINIFDVRQRQQRHRFQAHESAIKCLALDPHEEFFVSGAG----- 3293
Query: 123 SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHV 182
DGDIK+W L+ + LLY+FPGEH RSSFFK+IGQGVTQLHV
Sbjct: 3294 --------------------DGDIKIWGLTVHSLLYSFPGEHPRSSFFKNIGQGVTQLHV 3333
Query: 183 DGGSRLFSCGADGSMKVRQLPDRDAVVHTLY 213
D RLFSCGADGSMKVRQLP+RD VVHTLY
Sbjct: 3334 DSAGRLFSCGADGSMKVRQLPERDCVVHTLY 3364
|
Source: Apis mellifera Species: Apis mellifera Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|380017047|ref|XP_003692477.1| PREDICTED: LOW QUALITY PROTEIN: dmX-like protein 2-like [Apis florea] | Back alignment and taxonomy information |
|---|
Score = 285 bits (729), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 141/211 (66%), Positives = 163/211 (77%), Gaps = 25/211 (11%)
Query: 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLV 62
YQCH+K+T+DFVFLG+CSL+ATAGH SE +NV LWD+LLPQ K+L+Q F CH+QGASSL+
Sbjct: 3123 YQCHSKVTADFVFLGACSLIATAGHGSEGRNVALWDTLLPQNKSLIQGFTCHEQGASSLI 3182
Query: 63 FAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122
APQHQLLIS GKKGDI + D+RQR R RF AHES +KCLA+DPHEEFFV+GAG
Sbjct: 3183 LAPQHQLLISGGKKGDINIFDVRQRQQRHRFQAHESAIKCLALDPHEEFFVSGAG----- 3237
Query: 123 SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHV 182
DGDIK+W L+ + LLY+FPGEH RSSFFK+IGQGVTQLHV
Sbjct: 3238 --------------------DGDIKIWGLTVHSLLYSFPGEHPRSSFFKNIGQGVTQLHV 3277
Query: 183 DGGSRLFSCGADGSMKVRQLPDRDAVVHTLY 213
D RLFSCGADGSMKVRQLP+RD VVHTLY
Sbjct: 3278 DSAGRLFSCGADGSMKVRQLPERDCVVHTLY 3308
|
Source: Apis florea Species: Apis florea Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 213 | ||||||
| FB|FBgn0023458 | 3429 | Rbcn-3A "Rabconnectin-3A" [Dro | 0.436 | 0.027 | 0.688 | 4.4e-50 | |
| MGI|MGI:2443926 | 3013 | Dmxl1 "Dmx-like 1" [Mus muscul | 0.572 | 0.040 | 0.581 | 6.6e-36 | |
| UNIPROTKB|Q8TDJ6 | 3036 | DMXL2 "DmX-like protein 2" [Ho | 0.572 | 0.040 | 0.540 | 9.8e-35 | |
| MGI|MGI:2444630 | 3032 | Dmxl2 "Dmx-like 2" [Mus muscul | 0.572 | 0.040 | 0.540 | 3e-33 | |
| RGD|1586163 | 3055 | Dmxl2 "Dmx-like 2" [Rattus nor | 0.572 | 0.039 | 0.532 | 1.3e-32 | |
| DICTYBASE|DDB_G0283535 | 2792 | DDB_G0283535 "DmX-like protein | 0.558 | 0.042 | 0.459 | 1.5e-22 | |
| RGD|2323942 | 477 | Poc1b "POC1 centriolar protein | 0.535 | 0.238 | 0.308 | 3.5e-08 | |
| MGI|MGI:1918511 | 476 | Poc1b "POC1 centriolar protein | 0.539 | 0.241 | 0.297 | 2.4e-07 | |
| UNIPROTKB|H3BPD8 | 208 | KATNB1 "Katanin p80 WD40 repea | 0.347 | 0.355 | 0.320 | 2.8e-06 | |
| UNIPROTKB|Q5RD06 | 451 | POC1B "POC1 centriolar protein | 0.422 | 0.199 | 0.284 | 0.00051 |
| FB|FBgn0023458 Rbcn-3A "Rabconnectin-3A" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 368 (134.6 bits), Expect = 4.4e-50, Sum P(2) = 4.4e-50
Identities = 64/93 (68%), Positives = 80/93 (86%)
Query: 1 MTYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASS 60
++YQCHNK SDFVFLGSCSL+A+AG SSE+KN+ +WD+LLP KK+ V AF CHDQG+S
Sbjct: 3239 ISYQCHNKALSDFVFLGSCSLLASAGQSSENKNINIWDTLLPHKKSCVSAFTCHDQGSSC 3298
Query: 61 LVFAPQHQLLISAGKKGDICVIDLRQRVIRSRF 93
LVFAPQHQ+LIS GK+GD+CV D+RQR +R R+
Sbjct: 3299 LVFAPQHQVLISCGKRGDVCVFDVRQRTLRHRY 3331
|
|
| MGI|MGI:2443926 Dmxl1 "Dmx-like 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 405 (147.6 bits), Expect = 6.6e-36, P = 6.6e-36
Identities = 71/122 (58%), Positives = 95/122 (77%)
Query: 1 MTYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASS 60
+ +QCHNK +DFVF+ S SL+ATAG SS+++N+CLWD+L+ +LV AF CHD GA+
Sbjct: 2818 LAWQCHNKTANDFVFVSSSSLIATAGLSSDNRNICLWDTLVAPANSLVHAFTCHDSGATV 2877
Query: 61 LVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGD 120
L +AP+HQLLIS G+KG C+ DLRQR R F +H+SPVK +AIDP EE+FVTG+ +G+
Sbjct: 2878 LAYAPKHQLLISGGRKGFTCIFDLRQRQQRQLFQSHDSPVKAIAIDPTEEYFVTGSAEGN 2937
Query: 121 IK 122
IK
Sbjct: 2938 IK 2939
|
|
| UNIPROTKB|Q8TDJ6 DMXL2 "DmX-like protein 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 394 (143.8 bits), Expect = 9.8e-35, P = 9.8e-35
Identities = 66/122 (54%), Positives = 95/122 (77%)
Query: 1 MTYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASS 60
M++QCH+K TSDF F+ S SLVAT+GHS++++NVCLWD+L+ +L+ F CHD GA+
Sbjct: 2846 MSWQCHSKATSDFAFITSSSLVATSGHSNDNRNVCLWDTLISPGNSLIHGFTCHDHGATV 2905
Query: 61 LVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGD 120
L +AP+ QLLIS G+KG +C+ D+RQR + F AH+S +K LA+DP+EE+F TG+ +G+
Sbjct: 2906 LQYAPKQQLLISGGRKGHVCIFDIRQRQLIHTFQAHDSAIKALALDPYEEYFTTGSAEGN 2965
Query: 121 IK 122
IK
Sbjct: 2966 IK 2967
|
|
| MGI|MGI:2444630 Dmxl2 "Dmx-like 2" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 380 (138.8 bits), Expect = 3.0e-33, P = 3.0e-33
Identities = 66/122 (54%), Positives = 93/122 (76%)
Query: 1 MTYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASS 60
M++QCH+K TSDF F+ S SLVAT+GHS++++NVCLWD+L+ +L+ F CHD GA+
Sbjct: 2842 MSWQCHSKATSDFAFITSSSLVATSGHSNDNRNVCLWDTLISPGNSLIHGFTCHDHGATV 2901
Query: 61 LVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGD 120
L +AP+ QLLIS G+KG IC+ D+RQR + F AH+S +K LA+D EE+F TG+ +G+
Sbjct: 2902 LQYAPKQQLLISGGRKGYICIFDIRQRQLIHTFQAHDSAIKALALDSCEEYFTTGSAEGN 2961
Query: 121 IK 122
IK
Sbjct: 2962 IK 2963
|
|
| RGD|1586163 Dmxl2 "Dmx-like 2" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 374 (136.7 bits), Expect = 1.3e-32, P = 1.3e-32
Identities = 65/122 (53%), Positives = 92/122 (75%)
Query: 1 MTYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASS 60
M++QCH+K TSDF F+ S SLVAT+G S++++NVCLWD+L+ +L+ F CHD GA+
Sbjct: 2865 MSWQCHSKATSDFAFITSSSLVATSGQSNDNRNVCLWDTLISPGNSLIHGFTCHDHGATV 2924
Query: 61 LVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGD 120
L +AP+ QLLIS G+KG IC+ D+RQR + F AH+S +K LA+D EE+F TG+ +G+
Sbjct: 2925 LQYAPKQQLLISGGRKGYICIFDIRQRQLMHTFQAHDSAIKALALDSCEEYFTTGSAEGN 2984
Query: 121 IK 122
IK
Sbjct: 2985 IK 2986
|
|
| DICTYBASE|DDB_G0283535 DDB_G0283535 "DmX-like protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 279 (103.3 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 56/122 (45%), Positives = 79/122 (64%)
Query: 4 QCHNKITSDFVFLGSCSLVATAGHSS---ESKNVCLWDSLLPQKKALVQAFVCHDQGASS 60
Q H+K DF FL S SL+ATAG SS +S+++CLWD LLP K+L+ ++ + GASS
Sbjct: 2606 QAHSKQCLDFTFLNSGSLLATAGISSSDSKSRDICLWDVLLPPNKSLIASYTDQENGASS 2665
Query: 61 LVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGD 120
+V++P+ Q +I GKKG + + D+R F AH K LA+DP EEF +G+ DG+
Sbjct: 2666 IVYSPKRQTIIVGGKKGSLSLYDIRTHKQLESFKAHHLNTKSLALDPFEEFVCSGSSDGN 2725
Query: 121 IK 122
IK
Sbjct: 2726 IK 2727
|
|
| RGD|2323942 Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 119 (46.9 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 37/120 (30%), Positives = 57/120 (47%)
Query: 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLV 62
++ H + F +C +ATA S + LW SL P +A +V H +SL
Sbjct: 14 FKGHKAAITSADFSPNCKQIATA---SWDTFLMLW-SLKPHARAY--RYVGHKDVVTSLQ 67
Query: 63 FAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122
F+PQ LL SA + + + L ++ S F AH +PV+ + +F VT + D IK
Sbjct: 68 FSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSIK 127
|
|
| MGI|MGI:1918511 Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 114 (45.2 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 36/121 (29%), Positives = 57/121 (47%)
Query: 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSL 61
+++ H + F +C +ATA S + LW SL P +A +V H +SL
Sbjct: 13 SFKGHKAAITSADFSPNCKQIATA---SWDTFLMLW-SLKPHARAY--RYVGHKDVVTSL 66
Query: 62 VFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI 121
F+PQ LL SA + + + L ++ S F AH +PV+ + + VT + D I
Sbjct: 67 QFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSI 126
Query: 122 K 122
K
Sbjct: 127 K 127
|
|
| UNIPROTKB|H3BPD8 KATNB1 "Katanin p80 WD40 repeat-containing subunit B1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 88 (36.0 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 26/81 (32%), Positives = 38/81 (46%)
Query: 46 ALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDL----RQRVIRSRFNAHESPVK 101
A V+ V H SSLV L++ G GD C ++L + I S H SPV+
Sbjct: 15 AAVEEIVAHASNVSSLVLGKASGRLLATG--GDDCRVNLWSINKPNCIMS-LTGHTSPVE 71
Query: 102 CLAIDPHEEFFVTGAGDGDIK 122
+ ++ EE V G+ G I+
Sbjct: 72 SVRLNTPEELIVAGSQSGSIR 92
|
|
| UNIPROTKB|Q5RD06 POC1B "POC1 centriolar protein homolog B" [Pongo abelii (taxid:9601)] | Back alignment and assigned GO terms |
|---|
Score = 109 (43.4 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 27/95 (28%), Positives = 43/95 (45%)
Query: 29 SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLV-FAPQHQLLISAGKKGDICVIDLRQR 87
SE K + +WD+ K V F G ++ V F P + SAG + V D+R
Sbjct: 163 SEDKTIKIWDTT---NKQCVNNF-SDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVN 218
Query: 88 VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122
+ + H V C++ P + + VT + DG +K
Sbjct: 219 KLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLK 253
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 213 | |||
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 1e-21 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 2e-21 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 7e-14 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 8e-13 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 1e-11 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 3e-05 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 5e-04 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 6e-04 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 9e-04 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 0.001 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 89.7 bits (223), Expect = 1e-21
Identities = 50/216 (23%), Positives = 80/216 (37%), Gaps = 34/216 (15%)
Query: 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSL 61
T H S F ++++ SS K + +WD + K + H +S+
Sbjct: 88 TLTGHTSYVSSVAFSPDGRILSS---SSRDKTIKVWD--VETGK-CLTTLRGHTDWVNSV 141
Query: 62 VFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI 121
F+P + S+ + G I + DLR + H V +A P E ++ + DG I
Sbjct: 142 AFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTI 201
Query: 122 K-----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEH 164
K + V +A P +G+ DG I+VW L + G
Sbjct: 202 KLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLSGHT 261
Query: 165 ARSSFFKHIGQGVTQLHVD-GGSRLFSCGADGSMKV 199
VT L G RL S ADG++++
Sbjct: 262 NS----------VTSLAWSPDGKRLASGSADGTIRI 287
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 89.3 bits (222), Expect = 2e-21
Identities = 46/190 (24%), Positives = 69/190 (36%), Gaps = 31/190 (16%)
Query: 28 SSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR 87
S K + LWD + V+ H SS+ F+P ++L S+ + I V D+
Sbjct: 69 GSSDKTIRLWDL---ETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETG 125
Query: 88 VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAI 130
+ H V +A P F + + DG IK V +A
Sbjct: 126 KCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAF 185
Query: 131 DPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLF- 189
P E ++ + DG IK+W LS L G H GV + L
Sbjct: 186 SPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRG-H---------ENGVNSVAFSPDGYLLA 235
Query: 190 SCGADGSMKV 199
S DG+++V
Sbjct: 236 SGSEDGTIRV 245
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 68.5 bits (168), Expect = 7e-14
Identities = 36/171 (21%), Positives = 58/171 (33%), Gaps = 28/171 (16%)
Query: 47 LVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAID 106
L + H G + + F+P +LL + G I V DL + H PV+ +A
Sbjct: 1 LRRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAAS 60
Query: 107 PHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDGDIKVW 149
+ +G+ D I+ S V +A P + + D IKVW
Sbjct: 61 ADGTYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVW 120
Query: 150 SLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGADGSMKV 199
+ L G H V + + S DG++K+
Sbjct: 121 DVETGKCLTTLRG-HTDW---------VNSVAFSPDGTFVASSSQDGTIKL 161
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 65.4 bits (160), Expect = 8e-13
Identities = 41/167 (24%), Positives = 65/167 (38%), Gaps = 23/167 (13%)
Query: 1 MTYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASS 60
T + H + F + VA+ SS+ + LWD L K V H +S
Sbjct: 129 TTLRGHTDWVNSVAFSPDGTFVAS---SSQDGTIKLWD--LRTGK-CVATLTGHTGEVNS 182
Query: 61 LVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGD 120
+ F+P + L+S+ G I + DL HE+ V +A P +G+ DG
Sbjct: 183 VAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGT 242
Query: 121 IK-----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWS 150
I+ + V LA P + +G+ DG I++W
Sbjct: 243 IRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289
|
Length = 289 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 62.8 bits (151), Expect = 1e-11
Identities = 53/225 (23%), Positives = 84/225 (37%), Gaps = 31/225 (13%)
Query: 1 MTYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASS 60
T + H++ + F L+A+ SS + LWD + + H SS
Sbjct: 149 RTLEGHSESVTSLAFSPDGKLLASG--SSLDGTIKLWDL---RTGKPLSTLAGHTDPVSS 203
Query: 61 LVFAPQHQLLI-SAGKKGDICVIDLRQ-RVIRSRFNAHESPVKCLAIDPHEEFFVTGAGD 118
L F+P LLI S G I + DL +++RS + H V + P +G+ D
Sbjct: 204 LAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSD 262
Query: 119 GDIK------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNF 160
G I+ S V +A P + +G+ DG +++W L LL +
Sbjct: 263 GTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSL 322
Query: 161 PGE-HARS----SFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVR 200
+ H SF V+ DG RL+ +K
Sbjct: 323 TLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTL 367
|
Length = 466 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 43.5 bits (101), Expect = 3e-05
Identities = 33/150 (22%), Positives = 52/150 (34%), Gaps = 18/150 (12%)
Query: 28 SSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR 87
S V LWD L K H+ SSL F+P LL+S G + +
Sbjct: 302 GSSDGTVRLWD-LETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRT 360
Query: 88 VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAI 130
+ S V ++ P +G+ DG ++ S V L
Sbjct: 361 GKPLKTLEGHSNVLSVSFSPDGRVVSSGSTDGTVRLWDLSTGSLLRNLDGHTSRVTSLDF 420
Query: 131 DPHEEFFVTGAGDGDIKVWSLSGNHLLYNF 160
P + +G+ D I++W L + +F
Sbjct: 421 SPDGKSLASGSSDNTIRLWDLKTSLKSVSF 450
|
Length = 466 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 36.2 bits (84), Expect = 5e-04
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 122 KSPVKCLAIDPHEEFFVTGAGDGDIKVWS 150
PV +A P +G+ DG ++VW
Sbjct: 11 TGPVTSVAFSPDGNLLASGSDDGTVRVWD 39
|
Length = 39 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 36.1 bits (84), Expect = 6e-04
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 122 KSPVKCLAIDPHEEFFVTGAGDGDIKVWS 150
PV +A P ++ +G+ DG IK+W
Sbjct: 12 TGPVTSVAFSPDGKYLASGSDDGTIKLWD 40
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 35.4 bits (82), Expect = 9e-04
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 93 FNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122
H PV +A P +G+ DG ++
Sbjct: 7 LKGHTGPVTSVAFSPDGNLLASGSDDGTVR 36
|
Length = 39 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 35.4 bits (82), Expect = 0.001
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 93 FNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122
H PV +A P ++ +G+ DG IK
Sbjct: 8 LKGHTGPVTSVAFSPDGKYLASGSDDGTIK 37
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 213 | |||
| KOG0271|consensus | 480 | 100.0 | ||
| KOG0272|consensus | 459 | 100.0 | ||
| KOG0263|consensus | 707 | 100.0 | ||
| KOG0279|consensus | 315 | 100.0 | ||
| KOG0272|consensus | 459 | 100.0 | ||
| KOG0279|consensus | 315 | 100.0 | ||
| KOG0286|consensus | 343 | 100.0 | ||
| KOG0286|consensus | 343 | 100.0 | ||
| KOG0263|consensus | 707 | 100.0 | ||
| KOG0271|consensus | 480 | 100.0 | ||
| KOG0295|consensus | 406 | 100.0 | ||
| KOG0315|consensus | 311 | 100.0 | ||
| KOG0645|consensus | 312 | 100.0 | ||
| KOG0293|consensus | 519 | 100.0 | ||
| KOG0282|consensus | 503 | 100.0 | ||
| KOG0284|consensus | 464 | 100.0 | ||
| KOG0316|consensus | 307 | 100.0 | ||
| KOG0266|consensus | 456 | 100.0 | ||
| KOG0273|consensus | 524 | 100.0 | ||
| KOG0318|consensus | 603 | 100.0 | ||
| KOG0285|consensus | 460 | 100.0 | ||
| KOG0284|consensus | 464 | 100.0 | ||
| KOG0266|consensus | 456 | 100.0 | ||
| KOG0315|consensus | 311 | 100.0 | ||
| PTZ00421 | 493 | coronin; Provisional | 100.0 | |
| KOG0265|consensus | 338 | 100.0 | ||
| KOG0645|consensus | 312 | 99.98 | ||
| KOG0291|consensus | 893 | 99.98 | ||
| KOG0283|consensus | 712 | 99.97 | ||
| KOG0291|consensus | 893 | 99.97 | ||
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 99.97 | |
| KOG0273|consensus | 524 | 99.97 | ||
| KOG0640|consensus | 430 | 99.97 | ||
| KOG0296|consensus | 399 | 99.97 | ||
| KOG0276|consensus | 794 | 99.97 | ||
| KOG0292|consensus | 1202 | 99.97 | ||
| KOG0276|consensus | 794 | 99.97 | ||
| PTZ00420 | 568 | coronin; Provisional | 99.97 | |
| KOG0277|consensus | 311 | 99.97 | ||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.97 | |
| KOG0296|consensus | 399 | 99.97 | ||
| KOG0319|consensus | 775 | 99.97 | ||
| KOG0295|consensus | 406 | 99.97 | ||
| KOG0278|consensus | 334 | 99.97 | ||
| KOG0281|consensus | 499 | 99.97 | ||
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 99.96 | |
| KOG0313|consensus | 423 | 99.96 | ||
| KOG0306|consensus | 888 | 99.96 | ||
| KOG1407|consensus | 313 | 99.96 | ||
| KOG0277|consensus | 311 | 99.96 | ||
| KOG0643|consensus | 327 | 99.96 | ||
| KOG0275|consensus | 508 | 99.96 | ||
| KOG0319|consensus | 775 | 99.96 | ||
| KOG0973|consensus | 942 | 99.96 | ||
| KOG0318|consensus | 603 | 99.96 | ||
| KOG0294|consensus | 362 | 99.96 | ||
| KOG0643|consensus | 327 | 99.96 | ||
| KOG0285|consensus | 460 | 99.96 | ||
| KOG0283|consensus | 712 | 99.96 | ||
| KOG0647|consensus | 347 | 99.96 | ||
| KOG0281|consensus | 499 | 99.96 | ||
| KOG0265|consensus | 338 | 99.96 | ||
| KOG0289|consensus | 506 | 99.95 | ||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.95 | |
| KOG0313|consensus | 423 | 99.95 | ||
| KOG0264|consensus | 422 | 99.95 | ||
| PTZ00420 | 568 | coronin; Provisional | 99.95 | |
| KOG0310|consensus | 487 | 99.95 | ||
| KOG0269|consensus | 839 | 99.95 | ||
| KOG0306|consensus | 888 | 99.95 | ||
| PTZ00421 | 493 | coronin; Provisional | 99.95 | |
| KOG0772|consensus | 641 | 99.95 | ||
| KOG0292|consensus | 1202 | 99.95 | ||
| KOG0275|consensus | 508 | 99.95 | ||
| KOG0299|consensus | 479 | 99.95 | ||
| KOG1446|consensus | 311 | 99.94 | ||
| KOG0289|consensus | 506 | 99.94 | ||
| KOG0640|consensus | 430 | 99.94 | ||
| KOG1446|consensus | 311 | 99.94 | ||
| KOG1332|consensus | 299 | 99.94 | ||
| KOG0310|consensus | 487 | 99.94 | ||
| KOG0288|consensus | 459 | 99.94 | ||
| KOG1407|consensus | 313 | 99.94 | ||
| KOG0264|consensus | 422 | 99.94 | ||
| KOG0274|consensus | 537 | 99.94 | ||
| KOG0772|consensus | 641 | 99.94 | ||
| KOG0269|consensus | 839 | 99.94 | ||
| KOG0646|consensus | 476 | 99.93 | ||
| KOG0305|consensus | 484 | 99.93 | ||
| KOG0641|consensus | 350 | 99.93 | ||
| KOG0267|consensus | 825 | 99.93 | ||
| KOG0268|consensus | 433 | 99.93 | ||
| KOG0316|consensus | 307 | 99.93 | ||
| KOG0308|consensus | 735 | 99.93 | ||
| KOG0308|consensus | 735 | 99.93 | ||
| KOG4283|consensus | 397 | 99.93 | ||
| KOG0274|consensus | 537 | 99.93 | ||
| KOG0288|consensus | 459 | 99.93 | ||
| KOG0973|consensus | 942 | 99.93 | ||
| KOG0300|consensus | 481 | 99.93 | ||
| KOG0305|consensus | 484 | 99.92 | ||
| KOG1273|consensus | 405 | 99.92 | ||
| KOG2445|consensus | 361 | 99.92 | ||
| KOG0302|consensus | 440 | 99.92 | ||
| KOG0278|consensus | 334 | 99.92 | ||
| KOG0299|consensus | 479 | 99.92 | ||
| KOG2048|consensus | 691 | 99.92 | ||
| KOG2096|consensus | 420 | 99.92 | ||
| KOG0301|consensus | 745 | 99.92 | ||
| KOG0267|consensus | 825 | 99.92 | ||
| KOG0270|consensus | 463 | 99.91 | ||
| KOG1036|consensus | 323 | 99.91 | ||
| KOG1332|consensus | 299 | 99.91 | ||
| KOG0282|consensus | 503 | 99.91 | ||
| KOG0646|consensus | 476 | 99.91 | ||
| KOG0300|consensus | 481 | 99.9 | ||
| KOG0647|consensus | 347 | 99.9 | ||
| KOG4328|consensus | 498 | 99.9 | ||
| KOG0642|consensus | 577 | 99.9 | ||
| KOG1274|consensus | 933 | 99.9 | ||
| KOG0270|consensus | 463 | 99.9 | ||
| KOG1408|consensus | 1080 | 99.9 | ||
| KOG0639|consensus | 705 | 99.89 | ||
| KOG0302|consensus | 440 | 99.89 | ||
| KOG0303|consensus | 472 | 99.89 | ||
| KOG0301|consensus | 745 | 99.89 | ||
| KOG0641|consensus | 350 | 99.88 | ||
| KOG0639|consensus | 705 | 99.87 | ||
| KOG1274|consensus | 933 | 99.87 | ||
| KOG1445|consensus | 1012 | 99.87 | ||
| KOG2055|consensus | 514 | 99.87 | ||
| KOG1539|consensus | 910 | 99.87 | ||
| KOG1539|consensus | 910 | 99.87 | ||
| KOG1036|consensus | 323 | 99.86 | ||
| KOG0307|consensus | 1049 | 99.86 | ||
| KOG2055|consensus | 514 | 99.86 | ||
| KOG1063|consensus | 764 | 99.86 | ||
| KOG1523|consensus | 361 | 99.86 | ||
| KOG1273|consensus | 405 | 99.86 | ||
| KOG0771|consensus | 398 | 99.85 | ||
| KOG1009|consensus | 434 | 99.85 | ||
| KOG1310|consensus | 758 | 99.85 | ||
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 99.85 | |
| KOG1963|consensus | 792 | 99.85 | ||
| KOG1034|consensus | 385 | 99.85 | ||
| KOG0307|consensus | 1049 | 99.84 | ||
| KOG0321|consensus | 720 | 99.84 | ||
| KOG1408|consensus | 1080 | 99.83 | ||
| KOG0322|consensus | 323 | 99.83 | ||
| KOG2096|consensus | 420 | 99.83 | ||
| KOG1063|consensus | 764 | 99.83 | ||
| KOG0650|consensus | 733 | 99.83 | ||
| KOG0294|consensus | 362 | 99.83 | ||
| KOG4378|consensus | 673 | 99.83 | ||
| KOG1007|consensus | 370 | 99.82 | ||
| KOG2106|consensus | 626 | 99.82 | ||
| KOG0293|consensus | 519 | 99.82 | ||
| KOG1538|consensus | 1081 | 99.82 | ||
| KOG2106|consensus | 626 | 99.82 | ||
| KOG2048|consensus | 691 | 99.81 | ||
| KOG4378|consensus | 673 | 99.81 | ||
| KOG0290|consensus | 364 | 99.81 | ||
| KOG4283|consensus | 397 | 99.81 | ||
| KOG2919|consensus | 406 | 99.81 | ||
| KOG1445|consensus | 1012 | 99.81 | ||
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 99.81 | |
| KOG1523|consensus | 361 | 99.8 | ||
| KOG1538|consensus | 1081 | 99.8 | ||
| KOG0321|consensus | 720 | 99.8 | ||
| KOG0268|consensus | 433 | 99.8 | ||
| KOG2110|consensus | 391 | 99.79 | ||
| KOG0649|consensus | 325 | 99.78 | ||
| KOG1007|consensus | 370 | 99.78 | ||
| KOG0303|consensus | 472 | 99.78 | ||
| KOG0644|consensus | 1113 | 99.77 | ||
| KOG1009|consensus | 434 | 99.77 | ||
| KOG1587|consensus | 555 | 99.77 | ||
| KOG1188|consensus | 376 | 99.77 | ||
| KOG1188|consensus | 376 | 99.77 | ||
| KOG0650|consensus | 733 | 99.77 | ||
| KOG2394|consensus | 636 | 99.76 | ||
| KOG0290|consensus | 364 | 99.76 | ||
| KOG1034|consensus | 385 | 99.75 | ||
| KOG2919|consensus | 406 | 99.75 | ||
| KOG1524|consensus | 737 | 99.75 | ||
| KOG4227|consensus | 609 | 99.75 | ||
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 99.75 | |
| KOG0649|consensus | 325 | 99.74 | ||
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 99.74 | |
| KOG4328|consensus | 498 | 99.73 | ||
| KOG1524|consensus | 737 | 99.73 | ||
| COG2319 | 466 | FOG: WD40 repeat [General function prediction only | 99.73 | |
| KOG2110|consensus | 391 | 99.7 | ||
| KOG2139|consensus | 445 | 99.7 | ||
| KOG0642|consensus | 577 | 99.69 | ||
| COG2319 | 466 | FOG: WD40 repeat [General function prediction only | 99.69 | |
| KOG1272|consensus | 545 | 99.68 | ||
| KOG2394|consensus | 636 | 99.67 | ||
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 99.67 | |
| KOG1272|consensus | 545 | 99.67 | ||
| KOG3881|consensus | 412 | 99.67 | ||
| KOG2111|consensus | 346 | 99.66 | ||
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 99.66 | |
| KOG2445|consensus | 361 | 99.65 | ||
| KOG1310|consensus | 758 | 99.65 | ||
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 99.64 | |
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 99.64 | |
| KOG1240|consensus | 1431 | 99.64 | ||
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 99.63 | |
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 99.63 | |
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 99.63 | |
| KOG1587|consensus | 555 | 99.62 | ||
| KOG2111|consensus | 346 | 99.62 | ||
| KOG1334|consensus | 559 | 99.61 | ||
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 99.58 | |
| KOG4227|consensus | 609 | 99.58 | ||
| KOG0322|consensus | 323 | 99.57 | ||
| KOG1517|consensus | 1387 | 99.57 | ||
| KOG4497|consensus | 447 | 99.56 | ||
| KOG1517|consensus | 1387 | 99.56 | ||
| KOG2321|consensus | 703 | 99.55 | ||
| KOG2139|consensus | 445 | 99.53 | ||
| KOG1963|consensus | 792 | 99.52 | ||
| KOG1240|consensus | 1431 | 99.52 | ||
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 99.49 | |
| KOG4497|consensus | 447 | 99.49 | ||
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 99.49 | |
| KOG0644|consensus | 1113 | 99.48 | ||
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 99.46 | |
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 99.46 | |
| KOG1354|consensus | 433 | 99.43 | ||
| KOG1409|consensus | 404 | 99.43 | ||
| KOG0771|consensus | 398 | 99.43 | ||
| KOG1064|consensus | 2439 | 99.43 | ||
| KOG0974|consensus | 967 | 99.43 | ||
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 99.43 | |
| KOG3881|consensus | 412 | 99.42 | ||
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 99.42 | |
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 99.42 | |
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 99.41 | |
| KOG1354|consensus | 433 | 99.41 | ||
| KOG4547|consensus | 541 | 99.4 | ||
| KOG4190|consensus | 1034 | 99.39 | ||
| KOG0974|consensus | 967 | 99.37 | ||
| KOG2315|consensus | 566 | 99.36 | ||
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 99.35 | |
| KOG1064|consensus | 2439 | 99.33 | ||
| KOG0280|consensus | 339 | 99.32 | ||
| COG5170 | 460 | CDC55 Serine/threonine protein phosphatase 2A, reg | 99.32 | |
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 99.32 | |
| KOG0280|consensus | 339 | 99.31 | ||
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 99.31 | |
| KOG3914|consensus | 390 | 99.29 | ||
| KOG1912|consensus | 1062 | 99.29 | ||
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 99.28 | |
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 99.28 | |
| KOG2321|consensus | 703 | 99.27 | ||
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 99.27 | |
| PF15492 | 282 | Nbas_N: Neuroblastoma-amplified sequence, N termin | 99.27 | |
| KOG2314|consensus | 698 | 99.27 | ||
| PF15492 | 282 | Nbas_N: Neuroblastoma-amplified sequence, N termin | 99.24 | |
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 99.23 | |
| KOG2041|consensus | 1189 | 99.23 | ||
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 99.22 | |
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 99.21 | |
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 99.2 | |
| KOG1334|consensus | 559 | 99.2 | ||
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 99.17 | |
| KOG1409|consensus | 404 | 99.16 | ||
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 99.15 | |
| KOG2066|consensus | 846 | 99.14 | ||
| KOG0309|consensus | 1081 | 99.13 | ||
| KOG2695|consensus | 425 | 99.12 | ||
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 99.12 | |
| KOG2315|consensus | 566 | 99.11 | ||
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 99.1 | |
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 99.1 | |
| KOG4547|consensus | 541 | 99.06 | ||
| PF00400 | 39 | WD40: WD domain, G-beta repeat; InterPro: IPR01978 | 99.06 | |
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 99.05 | |
| KOG4532|consensus | 344 | 99.03 | ||
| PF00400 | 39 | WD40: WD domain, G-beta repeat; InterPro: IPR01978 | 99.0 | |
| KOG2695|consensus | 425 | 98.96 | ||
| KOG1645|consensus | 463 | 98.94 | ||
| KOG4532|consensus | 344 | 98.93 | ||
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 98.9 | |
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 98.88 | |
| KOG2114|consensus | 933 | 98.88 | ||
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 98.88 | |
| PF06977 | 248 | SdiA-regulated: SdiA-regulated; InterPro: IPR00972 | 98.87 | |
| KOG4714|consensus | 319 | 98.87 | ||
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 98.85 | |
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 98.82 | |
| KOG4190|consensus | 1034 | 98.81 | ||
| KOG4714|consensus | 319 | 98.8 | ||
| KOG3914|consensus | 390 | 98.8 | ||
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 98.8 | |
| KOG0309|consensus | 1081 | 98.78 | ||
| KOG1275|consensus | 1118 | 98.78 | ||
| KOG1912|consensus | 1062 | 98.75 | ||
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 98.72 | |
| KOG1008|consensus | 783 | 98.7 | ||
| KOG0882|consensus | 558 | 98.68 | ||
| COG5170 | 460 | CDC55 Serine/threonine protein phosphatase 2A, reg | 98.67 | |
| KOG0882|consensus | 558 | 98.65 | ||
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 98.64 | |
| KOG1832|consensus | 1516 | 98.64 | ||
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 98.63 | |
| KOG2041|consensus | 1189 | 98.6 | ||
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 98.59 | |
| KOG1832|consensus | 1516 | 98.58 | ||
| PF11768 | 545 | DUF3312: Protein of unknown function (DUF3312); In | 98.54 | |
| PF11768 | 545 | DUF3312: Protein of unknown function (DUF3312); In | 98.54 | |
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 98.54 | |
| KOG3617|consensus | 1416 | 98.53 | ||
| KOG1275|consensus | 1118 | 98.52 | ||
| KOG3621|consensus | 726 | 98.51 | ||
| KOG1920|consensus | 1265 | 98.5 | ||
| KOG4640|consensus | 665 | 98.49 | ||
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 98.46 | |
| KOG4649|consensus | 354 | 98.4 | ||
| KOG2066|consensus | 846 | 98.39 | ||
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 98.35 | |
| KOG1920|consensus | 1265 | 98.32 | ||
| COG3490 | 366 | Uncharacterized protein conserved in bacteria [Fun | 98.32 | |
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 98.28 | |
| PF04841 | 410 | Vps16_N: Vps16, N-terminal region; InterPro: IPR00 | 98.25 | |
| KOG1645|consensus | 463 | 98.23 | ||
| PRK13616 | 591 | lipoprotein LpqB; Provisional | 98.18 | |
| KOG1008|consensus | 783 | 98.14 | ||
| KOG2314|consensus | 698 | 98.11 | ||
| smart00320 | 40 | WD40 WD40 repeats. Note that these repeats are per | 98.11 | |
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 98.07 | |
| PF04053 | 443 | Coatomer_WDAD: Coatomer WD associated region ; Int | 98.03 | |
| PF00930 | 353 | DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin | 98.01 | |
| KOG4640|consensus | 665 | 97.99 | ||
| smart00320 | 40 | WD40 WD40 repeats. Note that these repeats are per | 97.98 | |
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 97.93 | |
| KOG3621|consensus | 726 | 97.91 | ||
| KOG2079|consensus | 1206 | 97.9 | ||
| PF06433 | 342 | Me-amine-dh_H: Methylamine dehydrogenase heavy cha | 97.89 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 97.88 | |
| PF08553 | 794 | VID27: VID27 cytoplasmic protein; InterPro: IPR013 | 97.87 | |
| PF03178 | 321 | CPSF_A: CPSF A subunit region; InterPro: IPR004871 | 97.86 | |
| PF08596 | 395 | Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; | 97.85 | |
| COG3204 | 316 | Uncharacterized protein conserved in bacteria [Fun | 97.85 | |
| KOG2114|consensus | 933 | 97.83 | ||
| PF14870 | 302 | PSII_BNR: Photosynthesis system II assembly factor | 97.82 | |
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 97.81 | |
| PF08553 | 794 | VID27: VID27 cytoplasmic protein; InterPro: IPR013 | 97.79 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 97.77 | |
| PF04053 | 443 | Coatomer_WDAD: Coatomer WD associated region ; Int | 97.71 | |
| COG3490 | 366 | Uncharacterized protein conserved in bacteria [Fun | 97.7 | |
| PF14783 | 111 | BBS2_Mid: Ciliary BBSome complex subunit 2, middle | 97.69 | |
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 97.68 | |
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 97.62 | |
| PF14783 | 111 | BBS2_Mid: Ciliary BBSome complex subunit 2, middle | 97.61 | |
| PRK13616 | 591 | lipoprotein LpqB; Provisional | 97.61 | |
| PF14655 | 415 | RAB3GAP2_N: Rab3 GTPase-activating protein regulat | 97.58 | |
| PF06977 | 248 | SdiA-regulated: SdiA-regulated; InterPro: IPR00972 | 97.56 | |
| PF12894 | 47 | Apc4_WD40: Anaphase-promoting complex subunit 4 WD | 97.52 | |
| PF12894 | 47 | Apc4_WD40: Anaphase-promoting complex subunit 4 WD | 97.52 | |
| KOG3617|consensus | 1416 | 97.49 | ||
| PF08596 | 395 | Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; | 97.46 | |
| KOG4649|consensus | 354 | 97.38 | ||
| COG3204 | 316 | Uncharacterized protein conserved in bacteria [Fun | 97.36 | |
| PF03178 | 321 | CPSF_A: CPSF A subunit region; InterPro: IPR004871 | 97.35 | |
| KOG2079|consensus | 1206 | 97.32 | ||
| COG3391 | 381 | Uncharacterized conserved protein [Function unknow | 97.28 | |
| PF06433 | 342 | Me-amine-dh_H: Methylamine dehydrogenase heavy cha | 97.27 | |
| KOG2395|consensus | 644 | 97.24 | ||
| PF00930 | 353 | DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin | 97.17 | |
| PF14870 | 302 | PSII_BNR: Photosynthesis system II assembly factor | 97.12 | |
| KOG2444|consensus | 238 | 97.05 | ||
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 97.05 | |
| KOG1916|consensus | 1283 | 96.97 | ||
| PHA02713 | 557 | hypothetical protein; Provisional | 96.92 | |
| PF15390 | 671 | DUF4613: Domain of unknown function (DUF4613) | 96.91 | |
| PF07995 | 331 | GSDH: Glucose / Sorbosone dehydrogenase; InterPro: | 96.91 | |
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 96.9 | |
| cd00216 | 488 | PQQ_DH Dehydrogenases with pyrrolo-quinoline quino | 96.89 | |
| PF02897 | 414 | Peptidase_S9_N: Prolyl oligopeptidase, N-terminal | 96.78 | |
| COG3391 | 381 | Uncharacterized conserved protein [Function unknow | 96.74 | |
| PF05096 | 264 | Glu_cyclase_2: Glutamine cyclotransferase; InterPr | 96.7 | |
| PF10313 | 43 | DUF2415: Uncharacterised protein domain (DUF2415); | 96.69 | |
| PF10647 | 253 | Gmad1: Lipoprotein LpqB beta-propeller domain; Int | 96.68 | |
| PF12234 | 631 | Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0 | 96.61 | |
| KOG4441|consensus | 571 | 96.51 | ||
| cd00216 | 488 | PQQ_DH Dehydrogenases with pyrrolo-quinoline quino | 96.51 | |
| KOG2444|consensus | 238 | 96.5 | ||
| KOG4460|consensus | 741 | 96.46 | ||
| KOG3630|consensus | 1405 | 96.45 | ||
| PF14655 | 415 | RAB3GAP2_N: Rab3 GTPase-activating protein regulat | 96.45 | |
| PF10647 | 253 | Gmad1: Lipoprotein LpqB beta-propeller domain; Int | 96.44 | |
| PF10313 | 43 | DUF2415: Uncharacterised protein domain (DUF2415); | 96.43 | |
| TIGR02604 | 367 | Piru_Ver_Nterm putative membrane-bound dehydrogena | 96.4 | |
| KOG2395|consensus | 644 | 96.39 | ||
| PF15390 | 671 | DUF4613: Domain of unknown function (DUF4613) | 96.39 | |
| KOG4499|consensus | 310 | 96.34 | ||
| PF07569 | 219 | Hira: TUP1-like enhancer of split; InterPro: IPR01 | 96.3 | |
| PF00780 | 275 | CNH: CNH domain; InterPro: IPR001180 Based on sequ | 96.3 | |
| KOG4499|consensus | 310 | 96.29 | ||
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 96.28 | |
| KOG2377|consensus | 657 | 96.2 | ||
| KOG1897|consensus | 1096 | 96.18 | ||
| KOG4460|consensus | 741 | 96.12 | ||
| PF14583 | 386 | Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C | 96.08 | |
| PF08728 | 717 | CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans | 96.03 | |
| KOG2280|consensus | 829 | 95.82 | ||
| KOG3630|consensus | 1405 | 95.82 | ||
| TIGR03075 | 527 | PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan | 95.63 | |
| KOG4441|consensus | 571 | 95.61 | ||
| PF12657 | 173 | TFIIIC_delta: Transcription factor IIIC subunit de | 95.56 | |
| KOG2377|consensus | 657 | 95.5 | ||
| PF00780 | 275 | CNH: CNH domain; InterPro: IPR001180 Based on sequ | 95.5 | |
| PF14583 | 386 | Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C | 95.47 | |
| TIGR02604 | 367 | Piru_Ver_Nterm putative membrane-bound dehydrogena | 95.04 | |
| PF14761 | 215 | HPS3_N: Hermansky-Pudlak syndrome 3 | 94.86 | |
| COG4590 | 733 | ABC-type uncharacterized transport system, permeas | 94.81 | |
| PRK10115 | 686 | protease 2; Provisional | 94.77 | |
| KOG2247|consensus | 615 | 94.67 | ||
| PHA03098 | 534 | kelch-like protein; Provisional | 94.41 | |
| PLN00033 | 398 | photosystem II stability/assembly factor; Provisio | 94.38 | |
| KOG2247|consensus | 615 | 94.36 | ||
| PF07569 | 219 | Hira: TUP1-like enhancer of split; InterPro: IPR01 | 94.22 | |
| PF12234 | 631 | Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0 | 94.21 | |
| PF14781 | 136 | BBS2_N: Ciliary BBSome complex subunit 2, N-termin | 94.15 | |
| PF04841 | 410 | Vps16_N: Vps16, N-terminal region; InterPro: IPR00 | 93.83 | |
| COG5167 | 776 | VID27 Protein involved in vacuole import and degra | 93.8 | |
| PHA02790 | 480 | Kelch-like protein; Provisional | 93.5 | |
| PF05694 | 461 | SBP56: 56kDa selenium binding protein (SBP56); Int | 93.47 | |
| COG4590 | 733 | ABC-type uncharacterized transport system, permeas | 93.42 | |
| COG5290 | 1243 | IkappaB kinase complex, IKAP component [Transcript | 93.28 | |
| TIGR02276 | 42 | beta_rpt_yvtn 40-residue YVTN family beta-propelle | 93.16 | |
| PRK13684 | 334 | Ycf48-like protein; Provisional | 93.12 | |
| COG5167 | 776 | VID27 Protein involved in vacuole import and degra | 93.1 | |
| COG5276 | 370 | Uncharacterized conserved protein [Function unknow | 93.09 | |
| PF12657 | 173 | TFIIIC_delta: Transcription factor IIIC subunit de | 92.79 | |
| PF11715 | 547 | Nup160: Nucleoporin Nup120/160; InterPro: IPR02171 | 92.38 | |
| KOG1900|consensus | 1311 | 92.36 | ||
| PF10214 | 765 | Rrn6: RNA polymerase I-specific transcription-init | 92.16 | |
| KOG1900|consensus | 1311 | 92.14 | ||
| PF07250 | 243 | Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP | 91.76 | |
| COG3823 | 262 | Glutamine cyclotransferase [Posttranslational modi | 91.7 | |
| TIGR03075 | 527 | PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan | 91.59 | |
| TIGR02276 | 42 | beta_rpt_yvtn 40-residue YVTN family beta-propelle | 91.36 | |
| PF11715 | 547 | Nup160: Nucleoporin Nup120/160; InterPro: IPR02171 | 91.06 | |
| PF08728 | 717 | CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans | 90.91 | |
| PF01436 | 28 | NHL: NHL repeat; InterPro: IPR001258 The NHL repea | 90.81 | |
| PHA02713 | 557 | hypothetical protein; Provisional | 90.24 | |
| PF07676 | 39 | PD40: WD40-like Beta Propeller Repeat; InterPro: I | 90.22 | |
| PRK13684 | 334 | Ycf48-like protein; Provisional | 90.0 | |
| PF07995 | 331 | GSDH: Glucose / Sorbosone dehydrogenase; InterPro: | 89.69 | |
| PHA02790 | 480 | Kelch-like protein; Provisional | 89.22 | |
| TIGR03074 | 764 | PQQ_membr_DH membrane-bound PQQ-dependent dehydrog | 89.18 | |
| TIGR03606 | 454 | non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH | 89.03 | |
| TIGR03074 | 764 | PQQ_membr_DH membrane-bound PQQ-dependent dehydrog | 88.62 | |
| PF14779 | 257 | BBS1: Ciliary BBSome complex subunit 1 | 87.95 | |
| PF10214 | 765 | Rrn6: RNA polymerase I-specific transcription-init | 87.67 | |
| smart00564 | 33 | PQQ beta-propeller repeat. Beta-propeller repeat o | 87.28 | |
| PF14781 | 136 | BBS2_N: Ciliary BBSome complex subunit 2, N-termin | 87.22 | |
| PF14269 | 299 | Arylsulfotran_2: Arylsulfotransferase (ASST) | 86.84 | |
| PF05096 | 264 | Glu_cyclase_2: Glutamine cyclotransferase; InterPr | 86.68 | |
| KOG1896|consensus | 1366 | 86.37 | ||
| PF05935 | 477 | Arylsulfotrans: Arylsulfotransferase (ASST); Inter | 86.22 | |
| PF01011 | 38 | PQQ: PQQ enzyme repeat family.; InterPro: IPR00237 | 86.07 | |
| PF07250 | 243 | Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP | 85.92 | |
| PF13449 | 326 | Phytase-like: Esterase-like activity of phytase | 85.68 | |
| PF02897 | 414 | Peptidase_S9_N: Prolyl oligopeptidase, N-terminal | 85.41 | |
| PHA03098 | 534 | kelch-like protein; Provisional | 85.33 | |
| PLN00033 | 398 | photosystem II stability/assembly factor; Provisio | 84.71 | |
| PF14761 | 215 | HPS3_N: Hermansky-Pudlak syndrome 3 | 84.65 | |
| PF14269 | 299 | Arylsulfotran_2: Arylsulfotransferase (ASST) | 84.63 | |
| TIGR03606 | 454 | non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH | 84.61 | |
| PF05694 | 461 | SBP56: 56kDa selenium binding protein (SBP56); Int | 84.46 | |
| KOG1916|consensus | 1283 | 84.15 | ||
| PF12768 | 281 | Rax2: Cortical protein marker for cell polarity | 83.95 | |
| KOG1983|consensus | 993 | 83.7 | ||
| COG5290 | 1243 | IkappaB kinase complex, IKAP component [Transcript | 83.44 | |
| PF08801 | 422 | Nucleoporin_N: Nup133 N terminal like; InterPro: I | 83.2 | |
| TIGR03118 | 336 | PEPCTERM_chp_1 conserved hypothetical protein TIGR | 83.18 | |
| PF12768 | 281 | Rax2: Cortical protein marker for cell polarity | 83.17 | |
| TIGR03032 | 335 | conserved hypothetical protein TIGR03032. This pro | 82.03 | |
| PF12341 | 27 | DUF3639: Protein of unknown function (DUF3639) ; I | 81.53 | |
| PF14727 | 418 | PHTB1_N: PTHB1 N-terminus | 80.23 |
| >KOG0271|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-40 Score=232.36 Aligned_cols=190 Identities=21% Similarity=0.333 Sum_probs=174.1
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
.+.||.++|.|+.|+|+|..||+| +.|.++++||+ .+..+..+.++|...|.|++|+|||+.|++|+.||.|++
T Consensus 110 S~~GH~e~Vl~~~fsp~g~~l~tG---sGD~TvR~WD~---~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~l 183 (480)
T KOG0271|consen 110 SIAGHGEAVLSVQFSPTGSRLVTG---SGDTTVRLWDL---DTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRL 183 (480)
T ss_pred ccCCCCCcEEEEEecCCCceEEec---CCCceEEeecc---CCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEE
Confidence 578999999999999999999999 79999999999 677888899999999999999999999999999999999
Q ss_pred EeccCceE-EEecccCCCCeeEEEecC-----CCCEEEEecCCCcee---------------------------------
Q psy7433 82 IDLRQRVI-RSRFNAHESPVKCLAIDP-----HEEFFVTGAGDGDIK--------------------------------- 122 (213)
Q Consensus 82 wd~~~~~~-~~~~~~~~~~i~~~~~~~-----~~~~l~~~~~~~~i~--------------------------------- 122 (213)
||..+++. ...+.+|...|++++|.| ..+.|++++.||.++
T Consensus 184 wdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~gliyS 263 (480)
T KOG0271|consen 184 WDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGEGLIYS 263 (480)
T ss_pred ecCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCccceEEEEEcCCceEEe
Confidence 99998854 456788999999999976 566888899998875
Q ss_pred --------------------------------------------------------------------------------
Q psy7433 123 -------------------------------------------------------------------------------- 122 (213)
Q Consensus 123 -------------------------------------------------------------------------------- 122 (213)
T Consensus 264 gS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgs 343 (480)
T KOG0271|consen 264 GSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGS 343 (480)
T ss_pred cCCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEec
Confidence
Q ss_pred ------------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeE
Q psy7433 123 ------------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVT 178 (213)
Q Consensus 123 ------------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 178 (213)
.-|+.+.|+||++++++++-|..|++||.++++-+.++++|. ..|+
T Consensus 344 Dd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfRGHv----------~~VY 413 (480)
T KOG0271|consen 344 DDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGKFLASFRGHV----------AAVY 413 (480)
T ss_pred CCceEEEecccccccchhhhhchhhheeeEEECCCccEEEEeecccceeeeeCCCcchhhhhhhcc----------ceeE
Confidence 678999999999999999999999999999999999999997 7899
Q ss_pred EEEeCCCCe-EEEEecCCcEEEEeCCCCcc
Q psy7433 179 QLHVDGGSR-LFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 179 ~~~~~~~~~-l~s~~~d~~i~iw~~~~~~~ 207 (213)
.++|+.|.+ |++|+.|.++++|++++.+.
T Consensus 414 qvawsaDsRLlVS~SkDsTLKvw~V~tkKl 443 (480)
T KOG0271|consen 414 QVAWSADSRLLVSGSKDSTLKVWDVRTKKL 443 (480)
T ss_pred EEEeccCccEEEEcCCCceEEEEEeeeeee
Confidence 999998765 88999999999999998743
|
|
| >KOG0272|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-38 Score=224.96 Aligned_cols=187 Identities=22% Similarity=0.283 Sum_probs=175.8
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecC--CCEEEEEcCCCcEEEE
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQ--HQLLISAGKKGDICVI 82 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~v~iw 82 (213)
|-+++|..+.|++++..|||+ +.+|.+++|+. .+...+..+.+|...+.++.|+|. +..|++|+.||++++|
T Consensus 173 gd~rPis~~~fS~ds~~laT~---swsG~~kvW~~---~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw 246 (459)
T KOG0272|consen 173 GDTRPISGCSFSRDSKHLATG---SWSGLVKVWSV---PQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLW 246 (459)
T ss_pred cCCCcceeeEeecCCCeEEEe---ecCCceeEeec---CCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeee
Confidence 457899999999999999999 89999999998 566888899999999999999995 6689999999999999
Q ss_pred eccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCCCc
Q psy7433 83 DLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDGD 145 (213)
Q Consensus 83 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg~ 145 (213)
++.+..+++.+.+|...|..++|+|+|++|++++.|.+.+ ..|.+++|+|||.++++|+.|..
T Consensus 247 ~~~~e~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~ 326 (459)
T KOG0272|consen 247 KLSQETPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSL 326 (459)
T ss_pred ccCCCcchhhhhcchhhheeeeecCCCceeeecccccchhhcccccchhhHhhcccccccceeEecCCCceeeccCccch
Confidence 9999999999999999999999999999999999999876 78999999999999999999999
Q ss_pred EEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEecCCcEEEEeCCCCcc
Q psy7433 146 IKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 146 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~d~~i~iw~~~~~~~ 207 (213)
-+|||+|++.++..+.+|. .+|.+++|+|+++ ||||+.|++++|||++....
T Consensus 327 ~RvWDlRtgr~im~L~gH~----------k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ 379 (459)
T KOG0272|consen 327 GRVWDLRTGRCIMFLAGHI----------KEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSE 379 (459)
T ss_pred hheeecccCcEEEEecccc----------cceeeEeECCCceEEeecCCCCcEEEeeeccccc
Confidence 9999999999999999987 7899999999876 99999999999999997755
|
|
| >KOG0263|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-38 Score=240.88 Aligned_cols=189 Identities=23% Similarity=0.382 Sum_probs=179.7
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
+|.||.++|..+.|+|+.++|+++ |.|++|++|.+ .+..++..+++|..+|..+.|+|.|-++|+++.|++.++
T Consensus 446 ~L~GH~GPVyg~sFsPd~rfLlSc---SED~svRLWsl---~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArL 519 (707)
T KOG0263|consen 446 TLYGHSGPVYGCSFSPDRRFLLSC---SEDSSVRLWSL---DTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARL 519 (707)
T ss_pred EeecCCCceeeeeecccccceeec---cCCcceeeeec---ccceeEEEecCCCcceeeEEecCCceEEEecCCCceeee
Confidence 578999999999999999999999 89999999999 688888899999999999999999999999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCCC
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDG 144 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg 144 (213)
|......+++.+.+|...+.|++|+|+..++++|+.|.+++ .+|.+++|+|+|++|++|+.||
T Consensus 520 Ws~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~ 599 (707)
T KOG0263|consen 520 WSTDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDG 599 (707)
T ss_pred eecccCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccCC
Confidence 99999999999999999999999999999999999999997 8999999999999999999999
Q ss_pred cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCC-CeEEEEecCCcEEEEeCCCCc
Q psy7433 145 DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG-SRLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 145 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~d~~i~iw~~~~~~ 206 (213)
.|.+||+.+++.+..+.+|. +.|.++.|+.+ +.|++++.|++|++||+....
T Consensus 600 ~I~iWDl~~~~~v~~l~~Ht----------~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~~ 652 (707)
T KOG0263|consen 600 LIKIWDLANGSLVKQLKGHT----------GTIYSLSFSRDGNVLASGGADNSVRLWDLTKVI 652 (707)
T ss_pred cEEEEEcCCCcchhhhhccc----------CceeEEEEecCCCEEEecCCCCeEEEEEchhhc
Confidence 99999999999999999985 78999999985 469999999999999997543
|
|
| >KOG0279|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=207.88 Aligned_cols=194 Identities=23% Similarity=0.345 Sum_probs=177.6
Q ss_pred ccccccCceEEEEEeCCC-CeEEEeeccCCCccEEEEeCCCc--ccccceeeeeeecCCceEEEEecCCCEEEEEcCCCc
Q psy7433 2 TYQCHNKITSDFVFLGSC-SLVATAGHSSESKNVCLWDSLLP--QKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGD 78 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~-~~l~~~g~~s~~~~i~iwd~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 78 (213)
+|++|++.|+.++..+.+ ..++++ +.|..+.+|++... +.+..++.+.+|...|..+..+++|+++++++.|+.
T Consensus 10 tl~gh~d~Vt~la~~~~~~~~l~sa---srDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~ 86 (315)
T KOG0279|consen 10 TLEGHTDWVTALAIKIKNSDILVSA---SRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDGT 86 (315)
T ss_pred eecCCCceEEEEEeecCCCceEEEc---ccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccccce
Confidence 689999999999999864 466666 89999999998532 345678999999999999999999999999999999
Q ss_pred EEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee------------------eceEEEEEccC--CceEE
Q psy7433 79 ICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------SPVKCLAIDPH--EEFFV 138 (213)
Q Consensus 79 v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------~~v~~~~~~~~--~~~l~ 138 (213)
+++||+.+++..+.|.+|...|.+++++|+++++++|+.|.+++ ..|.|+.|+|+ ..+|+
T Consensus 87 lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~ck~t~~~~~~~~WVscvrfsP~~~~p~Iv 166 (315)
T KOG0279|consen 87 LRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVCKYTIHEDSHREWVSCVRFSPNESNPIIV 166 (315)
T ss_pred EEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeecccEEEEEecCCCcCcEEEEEEcCCCCCcEEE
Confidence 99999999999999999999999999999999999999999987 67999999998 56999
Q ss_pred EecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEecCCcEEEEeCCCCccc
Q psy7433 139 TGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 139 ~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~d~~i~iw~~~~~~~~ 208 (213)
+++.|+++++||+++.+....+.+|. +.++.++++||+. .++|+.||.+.+||++.++.+
T Consensus 167 s~s~DktvKvWnl~~~~l~~~~~gh~----------~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~l 227 (315)
T KOG0279|consen 167 SASWDKTVKVWNLRNCQLRTTFIGHS----------GYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNL 227 (315)
T ss_pred EccCCceEEEEccCCcchhhcccccc----------ccEEEEEECCCCCEEecCCCCceEEEEEccCCcee
Confidence 99999999999999999999999987 7899999999875 788999999999999988763
|
|
| >KOG0272|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-38 Score=226.15 Aligned_cols=191 Identities=23% Similarity=0.278 Sum_probs=176.3
Q ss_pred CccccccCceEEEEEeCC--CCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCc
Q psy7433 1 MTYQCHNKITSDFVFLGS--CSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGD 78 (213)
Q Consensus 1 ~~l~~h~~~v~~~~~~~~--~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 78 (213)
++|.||+..|.++.|+|. +..+|++ +.||++++|++ .+...+..+.+|...|..++|+|+|++|++++.|.+
T Consensus 211 ~~l~gH~~~v~~~~fhP~~~~~~lat~---s~Dgtvklw~~---~~e~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~t 284 (459)
T KOG0272|consen 211 QTLRGHTSRVGAAVFHPVDSDLNLATA---SADGTVKLWKL---SQETPLQDLEGHLARVSRVAFHPSGKFLGTASFDST 284 (459)
T ss_pred EEEeccccceeeEEEccCCCccceeee---ccCCceeeecc---CCCcchhhhhcchhhheeeeecCCCceeeecccccc
Confidence 478999999999999996 6689999 79999999999 455788889999999999999999999999999999
Q ss_pred EEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEec
Q psy7433 79 ICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGA 141 (213)
Q Consensus 79 v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~ 141 (213)
-++||++++..+....+|...|.+++|.|||..+++|+.|..-+ ..|.+|+|+|+|..|++|+
T Consensus 285 WRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs 364 (459)
T KOG0272|consen 285 WRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGS 364 (459)
T ss_pred hhhcccccchhhHhhcccccccceeEecCCCceeeccCccchhheeecccCcEEEEecccccceeeEeECCCceEEeecC
Confidence 99999999988888899999999999999999999999997544 7899999999999999999
Q ss_pred CCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCC-CC-eEEEEecCCcEEEEeCCCCcc
Q psy7433 142 GDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG-GS-RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 142 ~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~-~l~s~~~d~~i~iw~~~~~~~ 207 (213)
.|++++|||++...+++.+++|. .-|+.+.|+| .+ +|+|++.|++++||.-.+-.+
T Consensus 365 ~Dnt~kVWDLR~r~~ly~ipAH~----------nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~ 422 (459)
T KOG0272|consen 365 SDNTCKVWDLRMRSELYTIPAHS----------NLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSP 422 (459)
T ss_pred CCCcEEEeeecccccceeccccc----------chhhheEecccCCeEEEEcccCcceeeecCCCccc
Confidence 99999999999999999999987 7899999998 33 599999999999999887644
|
|
| >KOG0279|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-35 Score=200.81 Aligned_cols=190 Identities=19% Similarity=0.339 Sum_probs=170.4
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
.|.||...|..+..+++|++.+++ +.|+++++||+ ..++..+.|.+|...|.+++|+++.+.+++|+.|.+|++
T Consensus 58 ~~~GHsH~v~dv~~s~dg~~alS~---swD~~lrlWDl---~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTikl 131 (315)
T KOG0279|consen 58 RLTGHSHFVSDVVLSSDGNFALSA---SWDGTLRLWDL---ATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKL 131 (315)
T ss_pred eeeccceEecceEEccCCceEEec---cccceEEEEEe---cCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeee
Confidence 478999999999999999999999 89999999999 566888899999999999999999999999999999999
Q ss_pred EeccCceEEEecccC-CCCeeEEEecCC--CCEEEEecCCCcee-----------------eceEEEEEccCCceEEEec
Q psy7433 82 IDLRQRVIRSRFNAH-ESPVKCLAIDPH--EEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGA 141 (213)
Q Consensus 82 wd~~~~~~~~~~~~~-~~~i~~~~~~~~--~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~ 141 (213)
|++............ ...|.|+.|+|+ ..+++.++.|+.++ ..++.+++||||.++++|+
T Consensus 132 wnt~g~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGg 211 (315)
T KOG0279|consen 132 WNTLGVCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGG 211 (315)
T ss_pred eeecccEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhccccccccEEEEEECCCCCEEecCC
Confidence 999866544433333 788999999997 77999999999998 7899999999999999999
Q ss_pred CCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCccc
Q psy7433 142 GDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 142 ~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
.||.+.+||++.++.++.+... ..|.+++|+|+.+.+....+..|+|||+.++..+
T Consensus 212 kdg~~~LwdL~~~k~lysl~a~-----------~~v~sl~fspnrywL~~at~~sIkIwdl~~~~~v 267 (315)
T KOG0279|consen 212 KDGEAMLWDLNEGKNLYSLEAF-----------DIVNSLCFSPNRYWLCAATATSIKIWDLESKAVV 267 (315)
T ss_pred CCceEEEEEccCCceeEeccCC-----------CeEeeEEecCCceeEeeccCCceEEEeccchhhh
Confidence 9999999999999999998775 6899999999988777777778999999987544
|
|
| >KOG0286|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-34 Score=197.33 Aligned_cols=190 Identities=17% Similarity=0.324 Sum_probs=173.9
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
+|+||.+.|+++.|++|.+.|+++ |.||.+.|||. .+...+..++.....|..++|+|.|+.+|.|+-|+...|
T Consensus 50 ~LkGH~~Ki~~~~ws~Dsr~ivSa---SqDGklIvWDs---~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csi 123 (343)
T KOG0286|consen 50 TLKGHLNKIYAMDWSTDSRRIVSA---SQDGKLIVWDS---FTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSI 123 (343)
T ss_pred EecccccceeeeEecCCcCeEEee---ccCCeEEEEEc---ccccceeEEecCceeEEEEEECCCCCeEEecCcCceeEE
Confidence 789999999999999999999999 89999999998 666777777878899999999999999999999999999
Q ss_pred EeccCc------eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEcc-CCceE
Q psy7433 82 IDLRQR------VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDP-HEEFF 137 (213)
Q Consensus 82 wd~~~~------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~-~~~~l 137 (213)
|++.+. +..+.+.+|.+.+.|+.|.+ ..+|++++.|.+.. ..|.+++++| +++.+
T Consensus 124 y~ls~~d~~g~~~v~r~l~gHtgylScC~f~d-D~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntF 202 (343)
T KOG0286|consen 124 YPLSTRDAEGNVRVSRELAGHTGYLSCCRFLD-DNHILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTF 202 (343)
T ss_pred EecccccccccceeeeeecCccceeEEEEEcC-CCceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeE
Confidence 999854 45567889999999999998 55788999998764 8899999999 89999
Q ss_pred EEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEecCCcEEEEeCCCCccc
Q psy7433 138 VTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 138 ~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~d~~i~iw~~~~~~~~ 208 (213)
++|+-|+..++||+|.+.+.+++.+|. ..|+++.|.|++. +++|+.|+..|+||++..+++
T Consensus 203 vSg~cD~~aklWD~R~~~c~qtF~ghe----------sDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~ 264 (343)
T KOG0286|consen 203 VSGGCDKSAKLWDVRSGQCVQTFEGHE----------SDINSVRFFPSGDAFATGSDDATCRLYDLRADQEL 264 (343)
T ss_pred EecccccceeeeeccCcceeEeecccc----------cccceEEEccCCCeeeecCCCceeEEEeecCCcEE
Confidence 999999999999999999999999998 7899999999775 999999999999999987654
|
|
| >KOG0286|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-34 Score=197.33 Aligned_cols=183 Identities=21% Similarity=0.315 Sum_probs=172.4
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec-CCCEEEEEcCCCcEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP-QHQLLISAGKKGDIC 80 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~ 80 (213)
+|.+|++.+.|+.|-+| ..|+|+ |.|.++.+||+ ++++.+..+.+|.+.|.++.++| +++.+++|+-|+..+
T Consensus 140 ~l~gHtgylScC~f~dD-~~ilT~---SGD~TCalWDi---e~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~ak 212 (343)
T KOG0286|consen 140 ELAGHTGYLSCCRFLDD-NHILTG---SGDMTCALWDI---ETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAK 212 (343)
T ss_pred eecCccceeEEEEEcCC-CceEec---CCCceEEEEEc---ccceEEEEecCCcccEEEEecCCCCCCeEEeccccccee
Confidence 57899999999999874 566676 68999999999 78889999999999999999999 999999999999999
Q ss_pred EEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-------------------eceEEEEEccCCceEEEec
Q psy7433 81 VIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-------------------SPVKCLAIDPHEEFFVTGA 141 (213)
Q Consensus 81 iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-------------------~~v~~~~~~~~~~~l~~~~ 141 (213)
+||++.+..++.|.+|...|.+++|.|+|.-|++|+.|++.+ .+|++++||..|++|++|.
T Consensus 213 lWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfagy 292 (343)
T KOG0286|consen 213 LWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFSKSGRLLFAGY 292 (343)
T ss_pred eeeccCcceeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEcccccEEEeee
Confidence 999999999999999999999999999999999999999887 7899999999999999999
Q ss_pred CCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEecCCcEEEEe
Q psy7433 142 GDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGADGSMKVRQ 201 (213)
Q Consensus 142 ~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~d~~i~iw~ 201 (213)
.|..+.+||.-.++....+.+|. ..|.++..+|++. +++|+.|..++||.
T Consensus 293 ~d~~c~vWDtlk~e~vg~L~GHe----------NRvScl~~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 293 DDFTCNVWDTLKGERVGVLAGHE----------NRVSCLGVSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred cCCceeEeeccccceEEEeeccC----------CeeEEEEECCCCcEEEecchhHheeecC
Confidence 99999999999999999999987 7899999999886 99999999999994
|
|
| >KOG0263|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=220.25 Aligned_cols=195 Identities=21% Similarity=0.365 Sum_probs=174.2
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCc----------------------------ccccceeeeee
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLP----------------------------QKKALVQAFVC 53 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~----------------------------~~~~~~~~~~~ 53 (213)
|+..-...++|..|++++.+||.| -.|..|++|.+... ......+++.+
T Consensus 373 T~~nt~~~v~ca~fSddssmlA~G---f~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~G 449 (707)
T KOG0263|consen 373 TFHNTYQGVTCAEFSDDSSMLACG---FVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYG 449 (707)
T ss_pred EEEEcCCcceeEeecCCcchhhcc---ccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeec
Confidence 344445679999999999988888 79999999998521 01112345778
Q ss_pred ecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------
Q psy7433 54 HDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----------- 122 (213)
Q Consensus 54 ~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------- 122 (213)
|.++|..+.|+|+.++|++++.|+++++|.+++...+..+++|..||+.++|+|.|-+||+++.|++-+
T Consensus 450 H~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~~PlR 529 (707)
T KOG0263|consen 450 HSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHNKPLR 529 (707)
T ss_pred CCCceeeeeecccccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeeecccCCchh
Confidence 999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred ------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEecCC
Q psy7433 123 ------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGADG 195 (213)
Q Consensus 123 ------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~d~ 195 (213)
+.|.|+.|+|+..|+++||.|.++++||+.++..+..+.+|. ++|.+++++|+++ |++|+.||
T Consensus 530 ifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~----------~~V~al~~Sp~Gr~LaSg~ed~ 599 (707)
T KOG0263|consen 530 IFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHK----------GPVTALAFSPCGRYLASGDEDG 599 (707)
T ss_pred hhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCC----------CceEEEEEcCCCceEeecccCC
Confidence 889999999999999999999999999999999999999987 8999999999765 99999999
Q ss_pred cEEEEeCCCCcccc
Q psy7433 196 SMKVRQLPDRDAVV 209 (213)
Q Consensus 196 ~i~iw~~~~~~~~~ 209 (213)
.|.+||+.++..+.
T Consensus 600 ~I~iWDl~~~~~v~ 613 (707)
T KOG0263|consen 600 LIKIWDLANGSLVK 613 (707)
T ss_pred cEEEEEcCCCcchh
Confidence 99999999986553
|
|
| >KOG0271|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=204.65 Aligned_cols=185 Identities=21% Similarity=0.369 Sum_probs=155.0
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec-----CCCEEEEEcCC
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP-----QHQLLISAGKK 76 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-----~~~~l~~~~~d 76 (213)
+.++|...|.|++|+|||+.||+| +.||+|++||.++ ..+..+.+.+|...|++++|.| ..++|++++.|
T Consensus 152 t~KgH~~WVlcvawsPDgk~iASG---~~dg~I~lwdpkt--g~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skD 226 (480)
T KOG0271|consen 152 TCKGHKNWVLCVAWSPDGKKIASG---SKDGSIRLWDPKT--GQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKD 226 (480)
T ss_pred eecCCccEEEEEEECCCcchhhcc---ccCCeEEEecCCC--CCcccccccCcccceeEEeecccccCCCccceecccCC
Confidence 678999999999999999999999 8999999999742 2344566777888888888865 44567777777
Q ss_pred CcEEEEeccCceEEE-----------------------------------------------------------------
Q psy7433 77 GDICVIDLRQRVIRS----------------------------------------------------------------- 91 (213)
Q Consensus 77 ~~v~iwd~~~~~~~~----------------------------------------------------------------- 91 (213)
|.++|||+..+.++.
T Consensus 227 g~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~gliySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtga 306 (480)
T KOG0271|consen 227 GSVRIWDTKLGTCVRTLSGHTASVTCVRWGGEGLIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGA 306 (480)
T ss_pred CCEEEEEccCceEEEEeccCccceEEEEEcCCceEEecCCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccc
Confidence 777777665432221
Q ss_pred -------------------------------------------------------ecccCCCCeeEEEecCCCCEEEEec
Q psy7433 92 -------------------------------------------------------RFNAHESPVKCLAIDPHEEFFVTGA 116 (213)
Q Consensus 92 -------------------------------------------------------~~~~~~~~i~~~~~~~~~~~l~~~~ 116 (213)
++.+|+..|..+.|+||++++++++
T Consensus 307 f~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaS 386 (480)
T KOG0271|consen 307 FDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASAS 386 (480)
T ss_pred cccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhheeeEEECCCccEEEEee
Confidence 1223456678999999999999999
Q ss_pred CCCcee-----------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEE
Q psy7433 117 GDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQ 179 (213)
Q Consensus 117 ~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 179 (213)
.|..++ ..|..++|+.|.++|++|+.|.++++||+++.+....+++|. ..|.+
T Consensus 387 FDkSVkLW~g~tGk~lasfRGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~tkKl~~DLpGh~----------DEVf~ 456 (480)
T KOG0271|consen 387 FDKSVKLWDGRTGKFLASFRGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVRTKKLKQDLPGHA----------DEVFA 456 (480)
T ss_pred cccceeeeeCCCcchhhhhhhccceeEEEEeccCccEEEEcCCCceEEEEEeeeeeecccCCCCC----------ceEEE
Confidence 999997 789999999999999999999999999999999999999987 78999
Q ss_pred EEeCCCC-eEEEEecCCcEEEEe
Q psy7433 180 LHVDGGS-RLFSCGADGSMKVRQ 201 (213)
Q Consensus 180 ~~~~~~~-~l~s~~~d~~i~iw~ 201 (213)
+.|+|++ ++++|+.|..+++|.
T Consensus 457 vDwspDG~rV~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 457 VDWSPDGQRVASGGKDKVLRLWR 479 (480)
T ss_pred EEecCCCceeecCCCceEEEeec
Confidence 9999975 699999999999995
|
|
| >KOG0295|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-34 Score=199.87 Aligned_cols=192 Identities=22% Similarity=0.412 Sum_probs=178.6
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
.|+||++.|.+++|+..|+++|++ +.|-.+++||.. ...++++...+|...|.+++|-|.|.++++++.|.+|+.
T Consensus 145 ~LrGHt~sv~di~~~a~Gk~l~tc---SsDl~~~LWd~~--~~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~ 219 (406)
T KOG0295|consen 145 SLRGHTDSVFDISFDASGKYLATC---SSDLSAKLWDFD--TFFRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKA 219 (406)
T ss_pred hhhccccceeEEEEecCccEEEec---CCccchhheeHH--HHHHHHHHhcCcccceeeEEEEecCCeeeecccccceeE
Confidence 589999999999999999999999 889889999984 347888889999999999999999999999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccC-----------
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPH----------- 133 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~----------- 133 (213)
|++.++.++..+++|...+..++.+.||..+++++.|.+++ .+|.|++|-|.
T Consensus 220 We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~ 299 (406)
T KOG0295|consen 220 WECDTGYCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATG 299 (406)
T ss_pred EecccceeEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhccccceEEEEecccccCcchhhccC
Confidence 99999999999999999999999999999999999999987 78889999873
Q ss_pred ----CceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCccc
Q psy7433 134 ----EEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 134 ----~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
++++.+++.|++|++||+.++.++.++.+|. ..|..++|+|++ +|+++..|+++++||+.+.++.
T Consensus 300 ~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghd----------nwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cm 369 (406)
T KOG0295|consen 300 STNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHD----------NWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCM 369 (406)
T ss_pred CCCCccEEEeecccceEEEEeccCCeEEEEEeccc----------ceeeeeEEcCCCeEEEEEecCCcEEEEEeccceee
Confidence 2589999999999999999999999999997 789999999965 5999999999999999998664
|
|
| >KOG0315|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-32 Score=184.97 Aligned_cols=191 Identities=19% Similarity=0.337 Sum_probs=166.6
Q ss_pred CccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEE
Q psy7433 1 MTYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDIC 80 (213)
Q Consensus 1 ~~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 80 (213)
.++++|++.|.++.|..+|+.++++ ++||+++|||++. ..+.+.++ |..+|+++..+|+...|++|..+|.|+
T Consensus 77 ~t~e~h~kNVtaVgF~~dgrWMyTg---seDgt~kIWdlR~---~~~qR~~~-~~spVn~vvlhpnQteLis~dqsg~ir 149 (311)
T KOG0315|consen 77 ATFEGHTKNVTAVGFQCDGRWMYTG---SEDGTVKIWDLRS---LSCQRNYQ-HNSPVNTVVLHPNQTELISGDQSGNIR 149 (311)
T ss_pred eEEeccCCceEEEEEeecCeEEEec---CCCceEEEEeccC---cccchhcc-CCCCcceEEecCCcceEEeecCCCcEE
Confidence 3689999999999999999999999 7999999999953 44445444 679999999999999999999999999
Q ss_pred EEeccCceEEEe-cccCCCCeeEEEecCCCCEEEEecCCCcee-----------------------eceEEEEEccCCce
Q psy7433 81 VIDLRQRVIRSR-FNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------------SPVKCLAIDPHEEF 136 (213)
Q Consensus 81 iwd~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------------~~v~~~~~~~~~~~ 136 (213)
+||+.+...... ++....++.++...|+|..++.+...|... ..+....+||++++
T Consensus 150 vWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~ 229 (311)
T KOG0315|consen 150 VWDLGENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKY 229 (311)
T ss_pred EEEccCCccccccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcE
Confidence 999998755444 355667899999999999999999998775 67888999999999
Q ss_pred EEEecCCCcEEEEEccCC-eeeeeecCCCCceeEEEecCCCeEEEEeCCC-CeEEEEecCCcEEEEeCCCCccc
Q psy7433 137 FVTGAGDGDIKVWSLSGN-HLLYNFPGEHARSSFFKHIGQGVTQLHVDGG-SRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 137 l~~~~~dg~i~v~d~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
|++++.|.+++||+..+. +....+.+|+ ..+...+|+.+ .+|++++.|+.+++|++..++++
T Consensus 230 lat~ssdktv~iwn~~~~~kle~~l~gh~----------rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v 293 (311)
T KOG0315|consen 230 LATCSSDKTVKIWNTDDFFKLELVLTGHQ----------RWVWDCAFSADGEYLVTASSDHTARLWDLSAGKEV 293 (311)
T ss_pred EEeecCCceEEEEecCCceeeEEEeecCC----------ceEEeeeeccCccEEEecCCCCceeecccccCcee
Confidence 999999999999999877 6666777776 68999999975 46999999999999999998755
|
|
| >KOG0645|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-32 Score=184.94 Aligned_cols=190 Identities=21% Similarity=0.316 Sum_probs=166.1
Q ss_pred CccccccCceEEEEEeCC-CCeEEEeeccCCCccEEEEeCCCcccccceeee-eeecCCceEEEEecCCCEEEEEcCCCc
Q psy7433 1 MTYQCHNKITSDFVFLGS-CSLVATAGHSSESKNVCLWDSLLPQKKALVQAF-VCHDQGASSLVFAPQHQLLISAGKKGD 78 (213)
Q Consensus 1 ~~l~~h~~~v~~~~~~~~-~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~ 78 (213)
+++++|++++..++|+|- |..||++ +.|..|++|+...+....+...+ .+|...|++++|+|.|++|++++.|.+
T Consensus 8 ~~~~gh~~r~W~~awhp~~g~ilAsc---g~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t 84 (312)
T KOG0645|consen 8 QKLSGHKDRVWSVAWHPGKGVILASC---GTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDAT 84 (312)
T ss_pred EeecCCCCcEEEEEeccCCceEEEee---cCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccce
Confidence 368899999999999997 8999999 68999999998543334444333 368899999999999999999999999
Q ss_pred EEEEeccCc--eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee--------------------eceEEEEEccCCce
Q psy7433 79 ICVIDLRQR--VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK--------------------SPVKCLAIDPHEEF 136 (213)
Q Consensus 79 v~iwd~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~--------------------~~v~~~~~~~~~~~ 136 (213)
+.||.-..+ +++..+.+|...|.|++|+++|++||+|+.|+.+- ..|..+.|+|...+
T Consensus 85 ~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dl 164 (312)
T KOG0645|consen 85 VVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDL 164 (312)
T ss_pred EEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcce
Confidence 999986543 78889999999999999999999999999999885 67888999999999
Q ss_pred EEEecCCCcEEEEEcc---CCeeeeeecCCCCceeEEEecCCCeEEEEeCCC-CeEEEEecCCcEEEEeCC
Q psy7433 137 FVTGAGDGDIKVWSLS---GNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG-SRLFSCGADGSMKVRQLP 203 (213)
Q Consensus 137 l~~~~~dg~i~v~d~~---~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~d~~i~iw~~~ 203 (213)
|++++.|++|++|+-. .-.+.+++.+|. ..|.+++|++. .+|++++.|+.++||...
T Consensus 165 L~S~SYDnTIk~~~~~~dddW~c~~tl~g~~----------~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~ 225 (312)
T KOG0645|consen 165 LFSCSYDNTIKVYRDEDDDDWECVQTLDGHE----------NTVWSLAFDNIGSRLVSCSDDGTVSIWRLY 225 (312)
T ss_pred eEEeccCCeEEEEeecCCCCeeEEEEecCcc----------ceEEEEEecCCCceEEEecCCcceEeeeec
Confidence 9999999999999875 336788898887 68999999994 589999999999999854
|
|
| >KOG0293|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-33 Score=201.23 Aligned_cols=192 Identities=21% Similarity=0.332 Sum_probs=164.9
Q ss_pred CccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEE
Q psy7433 1 MTYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDIC 80 (213)
Q Consensus 1 ~~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 80 (213)
++|+.|+..|+-+.|+++|++||++ +.|.+..+|++......+..+++.+|..+|..+.||||.++|++|+.+..+.
T Consensus 218 qil~~htdEVWfl~FS~nGkyLAsa---SkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~ 294 (519)
T KOG0293|consen 218 QILQDHTDEVWFLQFSHNGKYLASA---SKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLS 294 (519)
T ss_pred hhHhhCCCcEEEEEEcCCCeeEeec---cCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHhee
Confidence 4688999999999999999999999 8999999999854445667788899999999999999999999999999999
Q ss_pred EEeccCceEEEeccc-CCCCeeEEEecCCCCEEEEecCCCcee-------------------------------------
Q psy7433 81 VIDLRQRVIRSRFNA-HESPVKCLAIDPHEEFFVTGAGDGDIK------------------------------------- 122 (213)
Q Consensus 81 iwd~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------------------------- 122 (213)
+||+.+|.....++. +...+.+++|.||+..+++|+.|+.+.
T Consensus 295 lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn~~~~W~gvr~~~v~dlait~Dgk~vl~v~~ 374 (519)
T KOG0293|consen 295 LWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDGNILGNWEGVRDPKVHDLAITYDGKYVLLVTV 374 (519)
T ss_pred eccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCCcchhhcccccccceeEEEEEcCCCcEEEEEec
Confidence 999999988877753 357889999999999999999998875
Q ss_pred ---------------------eceEEEEEccCC---------------------------------------------ce
Q psy7433 123 ---------------------SPVKCLAIDPHE---------------------------------------------EF 136 (213)
Q Consensus 123 ---------------------~~v~~~~~~~~~---------------------------------------------~~ 136 (213)
.+|++++.|.++ .+
T Consensus 375 d~~i~l~~~e~~~dr~lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~f 454 (519)
T KOG0293|consen 375 DKKIRLYNREARVDRGLISEEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKF 454 (519)
T ss_pred ccceeeechhhhhhhccccccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEeccCCCCcce
Confidence 344444444333 57
Q ss_pred EEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC--eEEEEecCCcEEEEeCCCC
Q psy7433 137 FVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS--RLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 137 l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~~d~~i~iw~~~~~ 205 (213)
+++|++|+.|+||+.++++++..+.+|. ..|++++|+|.+ .+|+++.||+||||.....
T Consensus 455 iaSGSED~kvyIWhr~sgkll~~LsGHs----------~~vNcVswNP~~p~m~ASasDDgtIRIWg~~~~ 515 (519)
T KOG0293|consen 455 IASGSEDSKVYIWHRISGKLLAVLSGHS----------KTVNCVSWNPADPEMFASASDDGTIRIWGPSDN 515 (519)
T ss_pred EEecCCCceEEEEEccCCceeEeecCCc----------ceeeEEecCCCCHHHhhccCCCCeEEEecCCcc
Confidence 8888888899999988889999998887 789999999943 5999999999999987744
|
|
| >KOG0282|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-34 Score=208.15 Aligned_cols=184 Identities=19% Similarity=0.344 Sum_probs=168.5
Q ss_pred ccccccCceEEEEEeC-CCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEE
Q psy7433 2 TYQCHNKITSDFVFLG-SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDIC 80 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~-~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 80 (213)
++.||+..|.++.|.| .+.+|+++ +.|+.|+||++. ..+.+++++.+|..+|.+++|+.+|..+++++.|+.++
T Consensus 209 ~~~gH~kgvsai~~fp~~~hLlLS~---gmD~~vklW~vy--~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lK 283 (503)
T KOG0282|consen 209 NLSGHTKGVSAIQWFPKKGHLLLSG---GMDGLVKLWNVY--DDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLK 283 (503)
T ss_pred eccCCccccchhhhccceeeEEEec---CCCceEEEEEEe--cCcceehhhhcchhhhhhhhccccCCeeeeeecceeee
Confidence 5789999999999999 88899999 689999999995 35889999999999999999999999999999999999
Q ss_pred EEeccCceEEEecccCCCCeeEEEecCCC-CEEEEecCCCcee-------------------------------------
Q psy7433 81 VIDLRQRVIRSRFNAHESPVKCLAIDPHE-EFFVTGAGDGDIK------------------------------------- 122 (213)
Q Consensus 81 iwd~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~~~~i~------------------------------------- 122 (213)
+||+++|+++..+. ....+.|+.|+|++ +.|++|+.|+.|+
T Consensus 284 lwDtETG~~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissSD 362 (503)
T KOG0282|consen 284 LWDTETGQVLSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFISSSD 362 (503)
T ss_pred eeccccceEEEEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccCCceEeeecc
Confidence 99999999998886 45678899999987 7888999998876
Q ss_pred ----------------------------------------------------------------------eceEEEEEcc
Q psy7433 123 ----------------------------------------------------------------------SPVKCLAIDP 132 (213)
Q Consensus 123 ----------------------------------------------------------------------~~v~~~~~~~ 132 (213)
+--..+.|||
T Consensus 363 dks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSp 442 (503)
T KOG0282|consen 363 DKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSP 442 (503)
T ss_pred CccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEcC
Confidence 4557789999
Q ss_pred CCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCC--CeEEEEecCCcEEEEe
Q psy7433 133 HEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG--SRLFSCGADGSMKVRQ 201 (213)
Q Consensus 133 ~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~l~s~~~d~~i~iw~ 201 (213)
||++|++|+.||.+.+||.++.+.+..++.|. +++..+.|+|. ..+|+++.||.|++|+
T Consensus 443 DG~~l~SGdsdG~v~~wdwkt~kl~~~lkah~----------~~ci~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 443 DGRTLCSGDSDGKVNFWDWKTTKLVSKLKAHD----------QPCIGVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred CCCeEEeecCCccEEEeechhhhhhhccccCC----------cceEEEEecCCCcceeEecccCceeEecC
Confidence 99999999999999999999999999999986 78999999994 5699999999999996
|
|
| >KOG0284|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-34 Score=204.59 Aligned_cols=187 Identities=20% Similarity=0.348 Sum_probs=172.0
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeec-CCceEEEEecCCCEEEEEcCCCcEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHD-QGASSLVFAPQHQLLISAGKKGDIC 80 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~v~ 80 (213)
.+++|..+|+++.|++++.+++++ +.+|.|++|+. ....++.++.|. ..|++++|+|+...++++++||+|+
T Consensus 133 ilQaHDs~Vr~m~ws~~g~wmiSg---D~gG~iKyWqp----nmnnVk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ik 205 (464)
T KOG0284|consen 133 ILQAHDSPVRTMKWSHNGTWMISG---DKGGMIKYWQP----NMNNVKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIK 205 (464)
T ss_pred HhhhhcccceeEEEccCCCEEEEc---CCCceEEeccc----chhhhHHhhHhhhhhhheeccCCCCceeEEecCCCeEE
Confidence 478999999999999999999999 89999999996 455666666665 8999999999999999999999999
Q ss_pred EEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCC
Q psy7433 81 VIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGD 143 (213)
Q Consensus 81 iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~d 143 (213)
|||....+....+.+|.-.|.+++|+|....+++++.|..++ ..|..+.|+|++++|++++.|
T Consensus 206 iWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD 285 (464)
T KOG0284|consen 206 IWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKD 285 (464)
T ss_pred EEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeEeecCCCcchhhhhhhccceEEEEEEcCCCCeeEEccCC
Confidence 999998888888899999999999999999999999999886 789999999999999999999
Q ss_pred CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCC--CCeEEEEecCCcEEEEeCCCC
Q psy7433 144 GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG--GSRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 144 g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~l~s~~~d~~i~iw~~~~~ 205 (213)
..+++||+|+.+.++.+++|. ..++++.|+| .+.|.+|+.||.|..|.+...
T Consensus 286 ~~~kv~DiR~mkEl~~~r~Hk----------kdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~ 339 (464)
T KOG0284|consen 286 QSCKVFDIRTMKELFTYRGHK----------KDVTSLTWHPLNESLFTSGGSDGSVVHWVVGLE 339 (464)
T ss_pred ceEEEEehhHhHHHHHhhcch----------hhheeeccccccccceeeccCCCceEEEecccc
Confidence 999999999999999999987 6899999999 567999999999999999844
|
|
| >KOG0316|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-33 Score=186.79 Aligned_cols=193 Identities=16% Similarity=0.319 Sum_probs=173.8
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
+|.+|+++|+++.|+-+|++.+++| .|.+|++|+. ..+.+++++.+|..+|..++.+.++..+++|+.|..+.+
T Consensus 12 ~l~~~qgaV~avryN~dGnY~ltcG---sdrtvrLWNp---~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~v 85 (307)
T KOG0316|consen 12 ILDCAQGAVRAVRYNVDGNYCLTCG---SDRTVRLWNP---LRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQV 85 (307)
T ss_pred eecccccceEEEEEccCCCEEEEcC---CCceEEeecc---cccceeeeecCCCceeeeccccccccccccCCCCceEEE
Confidence 4678999999999999999999995 8999999997 788999999999999999999999999999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee---------------------------------------
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK--------------------------------------- 122 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~--------------------------------------- 122 (213)
||+.+|+..+++.+|...|+.++|+.+...+++|+.|..++
T Consensus 86 wDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~~heIvaGS~DG 165 (307)
T KOG0316|consen 86 WDVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVAEHEIVAGSVDG 165 (307)
T ss_pred EEcccCeeeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEecccEEEeeccCC
Confidence 99999999999999999999999999999999999999886
Q ss_pred ------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCC
Q psy7433 123 ------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG 184 (213)
Q Consensus 123 ------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 184 (213)
.+|++++|+++++..++++.|+++++.|-.+++.+..+.+|.... .-...++..
T Consensus 166 tvRtydiR~G~l~sDy~g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~e--------ykldc~l~q 237 (307)
T KOG0316|consen 166 TVRTYDIRKGTLSSDYFGHPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNME--------YKLDCCLNQ 237 (307)
T ss_pred cEEEEEeecceeehhhcCCcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcccccce--------eeeeeeecc
Confidence 789999999999999999999999999999999999999987432 222333443
Q ss_pred -CCeEEEEecCCcEEEEeCCCCccc
Q psy7433 185 -GSRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 185 -~~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
+..+++|+.||.|++||+.+...+
T Consensus 238 sdthV~sgSEDG~Vy~wdLvd~~~~ 262 (307)
T KOG0316|consen 238 SDTHVFSGSEDGKVYFWDLVDETQI 262 (307)
T ss_pred cceeEEeccCCceEEEEEeccceee
Confidence 567999999999999999887544
|
|
| >KOG0266|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-32 Score=208.24 Aligned_cols=195 Identities=22% Similarity=0.418 Sum_probs=172.3
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
++.+|...|++++|+|++++++++ +.|++|+|||++ .....++.+.+|...|++++|+|+++++++|+.|++|++
T Consensus 198 ~l~~h~~~v~~~~fs~d~~~l~s~---s~D~tiriwd~~--~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvri 272 (456)
T KOG0266|consen 198 ELSGHTRGVSDVAFSPDGSYLLSG---SDDKTLRIWDLK--DDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRI 272 (456)
T ss_pred cccccccceeeeEECCCCcEEEEe---cCCceEEEeecc--CCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEE
Confidence 457899999999999999999999 899999999993 455788999999999999999999999999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee--------------------e-ceEEEEEccCCceEEEe
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK--------------------S-PVKCLAIDPHEEFFVTG 140 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~--------------------~-~v~~~~~~~~~~~l~~~ 140 (213)
||++++++...+.+|.++|++++|+++++.|++++.|+.++ . +++++.|+|++++++++
T Consensus 273 Wd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~ 352 (456)
T KOG0266|consen 273 WDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSA 352 (456)
T ss_pred EeccCCeEEEeeeccCCceEEEEECCCCCEEEEcCCCccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEe
Confidence 99999999999999999999999999999999999999876 2 58999999999999999
Q ss_pred cCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCC-CeEEEEecCCcEEEEeCCCCccc
Q psy7433 141 AGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG-SRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 141 ~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
+.|+.+++||++.+.....+..|.... ..+.+....++ ..+++|+.|+.|++|++.++..+
T Consensus 353 ~~d~~~~~w~l~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~i~sg~~d~~v~~~~~~s~~~~ 414 (456)
T KOG0266|consen 353 SLDRTLKLWDLRSGKSVGTYTGHSNLV-------RCIFSPTLSTGGKLIYSGSEDGSVYVWDSSSGGIL 414 (456)
T ss_pred cCCCeEEEEEccCCcceeeecccCCcc-------eeEecccccCCCCeEEEEeCCceEEEEeCCccchh
Confidence 999999999999999999998886320 12333333444 46899999999999999976443
|
|
| >KOG0273|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-32 Score=195.91 Aligned_cols=185 Identities=18% Similarity=0.322 Sum_probs=165.7
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccC
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQ 86 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~ 86 (213)
++.|++++|+.+|.+||+| +.||.+++|+. .+..+.++..|.++|.+++|+..|++|++++.|+++.+||..+
T Consensus 235 nkdVT~L~Wn~~G~~LatG---~~~G~~riw~~----~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~ 307 (524)
T KOG0273|consen 235 NKDVTSLDWNNDGTLLATG---SEDGEARIWNK----DGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHT 307 (524)
T ss_pred cCCcceEEecCCCCeEEEe---ecCcEEEEEec----CchhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccC
Confidence 3679999999999999999 89999999995 7888899999999999999999999999999999999999966
Q ss_pred ceEE-----------------------------------------EecccCCCCeeEEEecCCCCEEEEecCCCcee---
Q psy7433 87 RVIR-----------------------------------------SRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK--- 122 (213)
Q Consensus 87 ~~~~-----------------------------------------~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~--- 122 (213)
+... .++.+|.++|.++.|+|.+..|++++.|++++
T Consensus 308 g~~~q~f~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs 387 (524)
T KOG0273|consen 308 GTVKQQFEFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWS 387 (524)
T ss_pred ceEEEeeeeccCCccceEEecCceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeee
Confidence 5322 24556888999999999999999999999997
Q ss_pred --------------eceEEEEEccCC---------ceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEE
Q psy7433 123 --------------SPVKCLAIDPHE---------EFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQ 179 (213)
Q Consensus 123 --------------~~v~~~~~~~~~---------~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 179 (213)
..|..+.|+|.| ..+++++.|++|++||+..+.++..+..|. .+|.+
T Consensus 388 ~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~----------~pVys 457 (524)
T KOG0273|consen 388 MGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQ----------EPVYS 457 (524)
T ss_pred cCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCC----------CceEE
Confidence 578888898864 479999999999999999999999999887 78999
Q ss_pred EEeCCCC-eEEEEecCCcEEEEeCCCCccc
Q psy7433 180 LHVDGGS-RLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 180 ~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
++|+|++ ++|+|+.||.|.+|+.+.++.+
T Consensus 458 vafS~~g~ylAsGs~dg~V~iws~~~~~l~ 487 (524)
T KOG0273|consen 458 VAFSPNGRYLASGSLDGCVHIWSTKTGKLV 487 (524)
T ss_pred EEecCCCcEEEecCCCCeeEeccccchhee
Confidence 9999975 6999999999999999988544
|
|
| >KOG0318|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-31 Score=194.31 Aligned_cols=115 Identities=18% Similarity=0.344 Sum_probs=101.5
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeee---eecCCceEEEEecCCCEEEEEcCCCc
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV---CHDQGASSLVFAPQHQLLISAGKKGD 78 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~ 78 (213)
+++.|.+-|+|++|+|||.+||++ +.||.|.+||= .+++.+..+. +|.+.|.++.|+||++.+++++.|.+
T Consensus 185 s~r~HskFV~~VRysPDG~~Fat~---gsDgki~iyDG---ktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt 258 (603)
T KOG0318|consen 185 SFREHSKFVNCVRYSPDGSRFATA---GSDGKIYIYDG---KTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKT 258 (603)
T ss_pred cccccccceeeEEECCCCCeEEEe---cCCccEEEEcC---CCccEEEEecCCCCccccEEEEEECCCCceEEEecCCce
Confidence 578899999999999999999999 58999999996 5666666666 89999999999999999999999999
Q ss_pred EEEEeccCceEEE-------------------------------------------ecccCCCCeeEEEecCCCCEEEEe
Q psy7433 79 ICVIDLRQRVIRS-------------------------------------------RFNAHESPVKCLAIDPHEEFFVTG 115 (213)
Q Consensus 79 v~iwd~~~~~~~~-------------------------------------------~~~~~~~~i~~~~~~~~~~~l~~~ 115 (213)
++|||+.+.++++ .+.+|...|+++..+|++++|++|
T Consensus 259 ~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~Sg 338 (603)
T KOG0318|consen 259 IKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSG 338 (603)
T ss_pred EEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEee
Confidence 9999997754322 345678899999999999999999
Q ss_pred cCCCcee
Q psy7433 116 AGDGDIK 122 (213)
Q Consensus 116 ~~~~~i~ 122 (213)
+.||.|.
T Consensus 339 syDG~I~ 345 (603)
T KOG0318|consen 339 SYDGHIN 345 (603)
T ss_pred ccCceEE
Confidence 9999885
|
|
| >KOG0285|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-31 Score=188.22 Aligned_cols=201 Identities=20% Similarity=0.350 Sum_probs=178.3
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
.+++|.+.|+|+++.|.+.+|+++ +.|++|+|||+ .+++...++.+|...|..+++|+...||++++.|+.|+-
T Consensus 146 Vi~gHlgWVr~vavdP~n~wf~tg---s~DrtikIwDl---atg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKC 219 (460)
T KOG0285|consen 146 VISGHLGWVRSVAVDPGNEWFATG---SADRTIKIWDL---ATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKC 219 (460)
T ss_pred hhhhccceEEEEeeCCCceeEEec---CCCceeEEEEc---ccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEE
Confidence 578999999999999999999999 89999999999 788888999999999999999999999999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCCC
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDG 144 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg 144 (213)
||++..+.++.+.+|-..|.|++.+|.-..|++|+.|..++ .+|..+.+.|....+++|+.|+
T Consensus 220 wDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~ 299 (460)
T KOG0285|consen 220 WDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVITGSHDS 299 (460)
T ss_pred EechhhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCCCcceeEEeecCCCceEEecCCc
Confidence 99999999999999999999999999999999999999887 7888899999888899999999
Q ss_pred cEEEEEccCCeeeeeecCCCCceeE-------------------------------EEecCCCeEEEEeCCCCeEEEEec
Q psy7433 145 DIKVWSLSGNHLLYNFPGEHARSSF-------------------------------FKHIGQGVTQLHVDGGSRLFSCGA 193 (213)
Q Consensus 145 ~i~v~d~~~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~v~~~~~~~~~~l~s~~~ 193 (213)
+|++||++.++...++..|...... ...+..-|++++.+.++.+++|+.
T Consensus 300 tvrlWDl~agkt~~tlt~hkksvral~lhP~e~~fASas~dnik~w~~p~g~f~~nlsgh~~iintl~~nsD~v~~~G~d 379 (460)
T KOG0285|consen 300 TVRLWDLRAGKTMITLTHHKKSVRALCLHPKENLFASASPDNIKQWKLPEGEFLQNLSGHNAIINTLSVNSDGVLVSGGD 379 (460)
T ss_pred eEEEeeeccCceeEeeecccceeeEEecCCchhhhhccCCccceeccCCccchhhccccccceeeeeeeccCceEEEcCC
Confidence 9999999988766555543321111 122345688888888999999999
Q ss_pred CCcEEEEeCCCCccc
Q psy7433 194 DGSMKVRQLPDRDAV 208 (213)
Q Consensus 194 d~~i~iw~~~~~~~~ 208 (213)
+|.+.+||.+++..+
T Consensus 380 ng~~~fwdwksg~ny 394 (460)
T KOG0285|consen 380 NGSIMFWDWKSGHNY 394 (460)
T ss_pred ceEEEEEecCcCccc
Confidence 999999999988665
|
|
| >KOG0284|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-32 Score=193.40 Aligned_cols=187 Identities=20% Similarity=0.319 Sum_probs=165.6
Q ss_pred ccccc-CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 3 YQCHN-KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 3 l~~h~-~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
+++|. ..|++++|+|+...|+++ +.|++|+|||. ...+..+.+.+|.-.|.++.|+|...++++++.|..|++
T Consensus 175 ~~ahh~eaIRdlafSpnDskF~t~---SdDg~ikiWdf---~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKl 248 (464)
T KOG0284|consen 175 IQAHHAEAIRDLAFSPNDSKFLTC---SDDGTIKIWDF---RMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKL 248 (464)
T ss_pred hhHhhhhhhheeccCCCCceeEEe---cCCCeEEEEec---cCCchhheeccCCCCcceeccCCccceeEEccCCceeEe
Confidence 45555 899999999999999999 89999999999 445555667899999999999999999999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCC-ceEEEecCC
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHE-EFFVTGAGD 143 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~-~~l~~~~~d 143 (213)
||.++++++.++..|...|..+.|+|++++|++++.|..++ ..++++.|+|-. .+|.+|+.|
T Consensus 249 WDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~D 328 (464)
T KOG0284|consen 249 WDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESLFTSGGSD 328 (464)
T ss_pred ecCCCcchhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeeccccccccceeeccCC
Confidence 99999999999999999999999999999999999999886 679999999964 489999999
Q ss_pred CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCC-CeEEEEecCCcEEEEeCCC
Q psy7433 144 GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG-SRLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 144 g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~d~~i~iw~~~~ 204 (213)
|.|..|.+...+++..++..+. ..|.+++|+|= ..|++|+.|.++++|.-..
T Consensus 329 gsvvh~~v~~~~p~~~i~~AHd---------~~iwsl~~hPlGhil~tgsnd~t~rfw~r~r 381 (464)
T KOG0284|consen 329 GSVVHWVVGLEEPLGEIPPAHD---------GEIWSLAYHPLGHILATGSNDRTVRFWTRNR 381 (464)
T ss_pred CceEEEeccccccccCCCcccc---------cceeeeeccccceeEeecCCCcceeeeccCC
Confidence 9999999986666666655442 78999999994 4689999999999997654
|
|
| >KOG0266|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-30 Score=199.72 Aligned_cols=190 Identities=23% Similarity=0.388 Sum_probs=167.7
Q ss_pred ccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEec-
Q psy7433 6 HNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDL- 84 (213)
Q Consensus 6 h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~- 84 (213)
|...|.++.|+|+|+.++++ +.++.+++|+...... ..++.+.+|...|..++|+|+++++++++.|+++++||+
T Consensus 158 ~~~sv~~~~fs~~g~~l~~~---~~~~~i~~~~~~~~~~-~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~ 233 (456)
T KOG0266|consen 158 ECPSVTCVDFSPDGRALAAA---SSDGLIRIWKLEGIKS-NLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLK 233 (456)
T ss_pred ccCceEEEEEcCCCCeEEEc---cCCCcEEEeecccccc-hhhccccccccceeeeEECCCCcEEEEecCCceEEEeecc
Confidence 37889999999999999999 8999999999832211 266667889999999999999999999999999999999
Q ss_pred cCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCCCcEE
Q psy7433 85 RQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDGDIK 147 (213)
Q Consensus 85 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg~i~ 147 (213)
..+..++.+.+|...|++++|+|+++.+++|+.|++++ ..|++++|++++++|++++.|+.|+
T Consensus 234 ~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~ 313 (456)
T KOG0266|consen 234 DDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIR 313 (456)
T ss_pred CCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEcCCCccEE
Confidence 55588899999999999999999999999999999997 7899999999999999999999999
Q ss_pred EEEccCCe--eeeeecCCCCceeEEEecCC-CeEEEEeCCCC-eEEEEecCCcEEEEeCCCCccc
Q psy7433 148 VWSLSGNH--LLYNFPGEHARSSFFKHIGQ-GVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 148 v~d~~~~~--~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
+||+.++. +...+..+.. . +++.+.|+|++ +++++..|+.+++||+.....+
T Consensus 314 vwd~~~~~~~~~~~~~~~~~---------~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~ 369 (456)
T KOG0266|consen 314 VWDLETGSKLCLKLLSGAEN---------SAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSV 369 (456)
T ss_pred EEECCCCceeeeecccCCCC---------CCceeEEEECCCCcEEEEecCCCeEEEEEccCCcce
Confidence 99999988 4566666552 3 69999999965 6899999999999999977544
|
|
| >KOG0315|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-30 Score=175.01 Aligned_cols=188 Identities=19% Similarity=0.358 Sum_probs=164.0
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
|++...+.|+.++..|+++.||++ ....|++||+++. +..++.++.+|...|+++.|..+|+.+++|+.||+++|
T Consensus 35 Tiqh~dsqVNrLeiTpdk~~LAaa----~~qhvRlyD~~S~-np~Pv~t~e~h~kNVtaVgF~~dgrWMyTgseDgt~kI 109 (311)
T KOG0315|consen 35 TIQHPDSQVNRLEITPDKKDLAAA----GNQHVRLYDLNSN-NPNPVATFEGHTKNVTAVGFQCDGRWMYTGSEDGTVKI 109 (311)
T ss_pred EEecCccceeeEEEcCCcchhhhc----cCCeeEEEEccCC-CCCceeEEeccCCceEEEEEeecCeEEEecCCCceEEE
Confidence 455556789999999999999999 4789999999764 34488899999999999999999999999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee------------------eceEEEEEccCCceEEEecCC
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------SPVKCLAIDPHEEFFVTGAGD 143 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------~~v~~~~~~~~~~~l~~~~~d 143 (213)
||++.....+.++ +..+|+++..+|+...|++|..+|.|+ ..+.++...|||.+++.+...
T Consensus 110 WdlR~~~~qR~~~-~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnk 188 (311)
T KOG0315|consen 110 WDLRSLSCQRNYQ-HNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNK 188 (311)
T ss_pred EeccCcccchhcc-CCCCcceEEecCCcceEEeecCCCcEEEEEccCCccccccCCCCCcceeeEEEcCCCcEEEEecCC
Confidence 9999976665555 779999999999999999999999997 789999999999999999999
Q ss_pred CcEEEEEccCC------eeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCC
Q psy7433 144 GDIKVWSLSGN------HLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 144 g~i~v~d~~~~------~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~ 205 (213)
|..++|++-.. +++.+++.|. +.+..+.++|++ +|++++.|.+++||+..+.
T Consensus 189 G~cyvW~l~~~~~~s~l~P~~k~~ah~----------~~il~C~lSPd~k~lat~ssdktv~iwn~~~~ 247 (311)
T KOG0315|consen 189 GNCYVWRLLNHQTASELEPVHKFQAHN----------GHILRCLLSPDVKYLATCSSDKTVKIWNTDDF 247 (311)
T ss_pred ccEEEEEccCCCccccceEhhheeccc----------ceEEEEEECCCCcEEEeecCCceEEEEecCCc
Confidence 99999998543 3344444444 789999999975 6999999999999999876
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-30 Score=197.84 Aligned_cols=195 Identities=14% Similarity=0.169 Sum_probs=156.2
Q ss_pred ccccccCceEEEEEeC-CCCeEEEeeccCCCccEEEEeCCCcc----cccceeeeeeecCCceEEEEecCC-CEEEEEcC
Q psy7433 2 TYQCHNKITSDFVFLG-SCSLVATAGHSSESKNVCLWDSLLPQ----KKALVQAFVCHDQGASSLVFAPQH-QLLISAGK 75 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~-~~~~l~~~g~~s~~~~i~iwd~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~ 75 (213)
.|.+|.+.|++++|+| ++++|+++ +.|++|++||+.... ....+..+.+|...|.+++|+|++ ++|++++.
T Consensus 70 ~l~GH~~~V~~v~fsP~d~~~LaSg---S~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~ 146 (493)
T PTZ00421 70 ILLGQEGPIIDVAFNPFDPQKLFTA---SEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGA 146 (493)
T ss_pred eEeCCCCCEEEEEEcCCCCCEEEEE---eCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeC
Confidence 3679999999999999 88899999 799999999985321 123567788999999999999975 79999999
Q ss_pred CCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee------------------eceEEEEEccCCceE
Q psy7433 76 KGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------SPVKCLAIDPHEEFF 137 (213)
Q Consensus 76 d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------~~v~~~~~~~~~~~l 137 (213)
|+.|++||+++++.+..+..|...|.+++|+|++..|++++.|+.++ .....+.|.+++..+
T Consensus 147 DgtVrIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~i 226 (493)
T PTZ00421 147 DMVVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLI 226 (493)
T ss_pred CCEEEEEECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeE
Confidence 99999999999999889999999999999999999999999999986 123456788887777
Q ss_pred EEec----CCCcEEEEEccCCe-eeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEe-cCCcEEEEeCCCCccc
Q psy7433 138 VTGA----GDGDIKVWSLSGNH-LLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCG-ADGSMKVRQLPDRDAV 208 (213)
Q Consensus 138 ~~~~----~dg~i~v~d~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~-~d~~i~iw~~~~~~~~ 208 (213)
++++ .|+.|++||+++.. +......+. ...+....|++++ .|++++ .|+.|++||+.++...
T Consensus 227 vt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~---------~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~ 295 (493)
T PTZ00421 227 ITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQ---------SSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLT 295 (493)
T ss_pred EEEecCCCCCCeEEEEeCCCCCCceeEeccCC---------CCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceE
Confidence 6653 47899999998654 333332222 1345566788764 567766 5999999999987643
|
|
| >KOG0265|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-30 Score=180.09 Aligned_cols=188 Identities=21% Similarity=0.293 Sum_probs=169.2
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
.+.+|++.|+.+.|+|+|.+||++| .|..|.+|++. ...+....+++|.+.|..+.|.++++.+++++.|.+++.
T Consensus 42 ~l~gh~geI~~~~F~P~gs~~aSgG---~Dr~I~LWnv~--gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~ 116 (338)
T KOG0265|consen 42 LLPGHKGEIYTIKFHPDGSCFASGG---SDRAIVLWNVY--GDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRG 116 (338)
T ss_pred hcCCCcceEEEEEECCCCCeEeecC---CcceEEEEecc--ccccceeeeccccceeEeeeeccCCCEEEEecCCceEEE
Confidence 4679999999999999999999994 79999999973 344556667799999999999999999999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCC-EEEEecCCCcee----------------eceEEEEEccCCceEEEecCCC
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEE-FFVTGAGDGDIK----------------SPVKCLAIDPHEEFFVTGAGDG 144 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~~~~i~----------------~~v~~~~~~~~~~~l~~~~~dg 144 (213)
||+++|+..++++.|..-+..+..+.-|. .+.+++.|++++ ..++++.|..++..+.+|+-|+
T Consensus 117 wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~kyqltAv~f~d~s~qv~sggIdn 196 (338)
T KOG0265|consen 117 WDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENKYQLTAVGFKDTSDQVISGGIDN 196 (338)
T ss_pred EecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccccceeEEEEEecccccceeeccccC
Confidence 99999999999999999999998655555 455677888886 7889999999999999999999
Q ss_pred cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCC-CeEEEEecCCcEEEEeCCC
Q psy7433 145 DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG-SRLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 145 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~d~~i~iw~~~~ 204 (213)
.|++||++.......+.+|. .+|+.+..+++ .++.+-+.|..+++||++.
T Consensus 197 ~ikvWd~r~~d~~~~lsGh~----------DtIt~lsls~~gs~llsnsMd~tvrvwd~rp 247 (338)
T KOG0265|consen 197 DIKVWDLRKNDGLYTLSGHA----------DTITGLSLSRYGSFLLSNSMDNTVRVWDVRP 247 (338)
T ss_pred ceeeeccccCcceEEeeccc----------CceeeEEeccCCCccccccccceEEEEEecc
Confidence 99999999999999999997 79999999985 4699999999999999975
|
|
| >KOG0645|consensus | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.1e-30 Score=176.66 Aligned_cols=192 Identities=21% Similarity=0.290 Sum_probs=164.3
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
+|+||...|.|++|+++|++||++ +.|..|-||.+.......++..++.|...|..+.|+|...+|+++++|.+|++
T Consensus 100 ~lEGHEnEVK~Vaws~sG~~LATC---SRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~ 176 (312)
T KOG0645|consen 100 TLEGHENEVKCVAWSASGNYLATC---SRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKV 176 (312)
T ss_pred eeeccccceeEEEEcCCCCEEEEe---eCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcceeEEeccCCeEEE
Confidence 689999999999999999999999 89999999999777778899999999999999999999999999999999999
Q ss_pred Eecc---CceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-------------eceEEEEEccCCceEEEecCCCc
Q psy7433 82 IDLR---QRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-------------SPVKCLAIDPHEEFFVTGAGDGD 145 (213)
Q Consensus 82 wd~~---~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-------------~~v~~~~~~~~~~~l~~~~~dg~ 145 (213)
|+-. ..++++++.+|...+.+++|+|.|..|++++.|++++ ..+..++|. ...|++++.|+.
T Consensus 177 ~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~~~~~~~sr~~Y~v~W~--~~~IaS~ggD~~ 254 (312)
T KOG0645|consen 177 YRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYTDLSGMHSRALYDVPWD--NGVIASGGGDDA 254 (312)
T ss_pred EeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeeccCcchhcccceEeeeec--ccceEeccCCCE
Confidence 9876 2378899999999999999999999999999999987 677888998 457999999999
Q ss_pred EEEEEccCC--eeeeeecCCCCceeEEEecCCCeEEEEeCC--CCeEEEEecCCcEEEEeCC
Q psy7433 146 IKVWSLSGN--HLLYNFPGEHARSSFFKHIGQGVTQLHVDG--GSRLFSCGADGSMKVRQLP 203 (213)
Q Consensus 146 i~v~d~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~l~s~~~d~~i~iw~~~ 203 (213)
|++|.-... ++...+..+ ....|+..|+++.|.| .++|++++.||.+++|.+.
T Consensus 255 i~lf~~s~~~d~p~~~l~~~-----~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 255 IRLFKESDSPDEPSWNLLAK-----KEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWELE 311 (312)
T ss_pred EEEEEecCCCCCchHHHHHh-----hhcccccccceEEEcCCCCCceeecCCCceEEEEEec
Confidence 999975421 111111110 1122347899999999 5789999999999999874
|
|
| >KOG0291|consensus | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.9e-30 Score=197.04 Aligned_cols=199 Identities=19% Similarity=0.353 Sum_probs=169.7
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
..++|...+.+++++|||+++||| ..||.|+|||. ..+-|+.++..|...|+.+.|+..++.+++.+-||+|+.
T Consensus 345 KQQgH~~~i~~l~YSpDgq~iaTG---~eDgKVKvWn~---~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRA 418 (893)
T KOG0291|consen 345 KQQGHSDRITSLAYSPDGQLIATG---AEDGKVKVWNT---QSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRA 418 (893)
T ss_pred eccccccceeeEEECCCCcEEEec---cCCCcEEEEec---cCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEe
Confidence 457899999999999999999999 79999999998 677899999999999999999999999999999999888
Q ss_pred EeccCc--------------------------------------------eEEEecccCCCCeeEEEecCCCCEEEEecC
Q psy7433 82 IDLRQR--------------------------------------------VIRSRFNAHESPVKCLAIDPHEEFFVTGAG 117 (213)
Q Consensus 82 wd~~~~--------------------------------------------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 117 (213)
||+... +.+-.+.+|.+||.+++|+|++..|++++.
T Consensus 419 wDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SW 498 (893)
T KOG0291|consen 419 WDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSW 498 (893)
T ss_pred eeecccceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccc
Confidence 887432 223345689999999999999999999999
Q ss_pred CCcee-----------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCc----------eeEE
Q psy7433 118 DGDIK-----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHAR----------SSFF 170 (213)
Q Consensus 118 ~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~----------~~~~ 170 (213)
|.+++ ..+..++|+|+|+.+++++.||.|.+||.+.+.....+.+-... ....
T Consensus 499 DkTVRiW~if~s~~~vEtl~i~sdvl~vsfrPdG~elaVaTldgqItf~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~ 578 (893)
T KOG0291|consen 499 DKTVRIWDIFSSSGTVETLEIRSDVLAVSFRPDGKELAVATLDGQITFFDIKEAVQVGSIDGRKDLSGGRKETDRITAEN 578 (893)
T ss_pred cceEEEEEeeccCceeeeEeeccceeEEEEcCCCCeEEEEEecceEEEEEhhhceeeccccchhhccccccccceeehhh
Confidence 99998 67899999999999999999999999999877766555542210 1112
Q ss_pred EecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCc
Q psy7433 171 KHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 171 ~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~ 206 (213)
...+...+.+++++|+ .+++|+..+.|++|++.++-
T Consensus 579 sa~~K~Ftti~ySaDG~~IlAgG~sn~iCiY~v~~~v 615 (893)
T KOG0291|consen 579 SAKGKTFTTICYSADGKCILAGGESNSICIYDVPEGV 615 (893)
T ss_pred cccCCceEEEEEcCCCCEEEecCCcccEEEEECchhh
Confidence 2344689999999876 58999999999999999874
|
|
| >KOG0283|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=200.70 Aligned_cols=199 Identities=18% Similarity=0.336 Sum_probs=164.6
Q ss_pred Cccc-cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCC----------------------------cc--------
Q psy7433 1 MTYQ-CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLL----------------------------PQ-------- 43 (213)
Q Consensus 1 ~~l~-~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~----------------------------~~-------- 43 (213)
|.++ +|.+.|+++.|++||+|||++ +.|+.|+||.+.. ..
T Consensus 260 Qe~~~ah~gaIw~mKFS~DGKyLAsa---GeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~ 336 (712)
T KOG0283|consen 260 QEISNAHKGAIWAMKFSHDGKYLASA---GEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRT 336 (712)
T ss_pred eccccccCCcEEEEEeCCCCceeeec---CCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccc
Confidence 3466 899999999999999999999 5899999998743 00
Q ss_pred ---------------------cccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeE
Q psy7433 44 ---------------------KKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKC 102 (213)
Q Consensus 44 ---------------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~ 102 (213)
..+++..+.+|.+.|..+.||.++ +|++++.|.+|+||++...+++..|. |.+.|+|
T Consensus 337 s~~~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~-fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTc 414 (712)
T KOG0283|consen 337 SSSRKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNN-FLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTC 414 (712)
T ss_pred cccccccCCccccCCCccccccccchhhhhccchhheecccccCC-eeEeccccccEEeecCCCcceeeEEe-cCCeeEE
Confidence 001234456899999999999764 89999999999999999999999887 9999999
Q ss_pred EEecC-CCCEEEEecCCCcee----------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCC
Q psy7433 103 LAIDP-HEEFFVTGAGDGDIK----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHA 165 (213)
Q Consensus 103 ~~~~~-~~~~l~~~~~~~~i~----------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~ 165 (213)
++|+| |.++|++|+-|+.++ .-|++++|.|+|++.++|+.+|.+++|+.+..+.......+..
T Consensus 415 VaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~ 494 (712)
T KOG0283|consen 415 VAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLH 494 (712)
T ss_pred EEecccCCCcEeecccccceEEeecCcCeeEeehhhhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeec
Confidence 99999 888999999999997 7899999999999999999999999999987776655544322
Q ss_pred ceeEEEecCCCeEEEEeCCCC--eEEEEecCCcEEEEeCCCCc
Q psy7433 166 RSSFFKHIGQGVTQLHVDGGS--RLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 166 ~~~~~~~~~~~v~~~~~~~~~--~l~s~~~d~~i~iw~~~~~~ 206 (213)
... ... +..|+++.+.|.. .+++.+.|..|||+|.+...
T Consensus 495 ~~K-k~~-~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~ 535 (712)
T KOG0283|consen 495 NKK-KKQ-GKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKD 535 (712)
T ss_pred cCc-ccc-CceeeeeEecCCCCCeEEEecCCCceEEEeccchh
Confidence 111 111 2379999999843 58889999999999996653
|
|
| >KOG0291|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=8e-30 Score=194.67 Aligned_cols=187 Identities=22% Similarity=0.370 Sum_probs=171.3
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccC
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQ 86 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~ 86 (213)
..+|..++|+..|++||.++ +.=|.+.||++ ....-+-..++|...+++++++|||+++++|+.||.|++||..+
T Consensus 307 ~~~I~t~~~N~tGDWiA~g~--~klgQLlVweW---qsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~S 381 (893)
T KOG0291|consen 307 DQKILTVSFNSTGDWIAFGC--SKLGQLLVWEW---QSESYVLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQS 381 (893)
T ss_pred cceeeEEEecccCCEEEEcC--CccceEEEEEe---eccceeeeccccccceeeEEECCCCcEEEeccCCCcEEEEeccC
Confidence 46799999999999999995 56789999999 56666777789999999999999999999999999999999999
Q ss_pred ceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee------------------eceEEEEEccCCceEEEecCCC-cEE
Q psy7433 87 RVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------SPVKCLAIDPHEEFFVTGAGDG-DIK 147 (213)
Q Consensus 87 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------~~v~~~~~~~~~~~l~~~~~dg-~i~ 147 (213)
+-+..+|..|...++.++|+..++.+++.+.||+++ ....|++.+|.|.++++|+.|. .|.
T Consensus 382 gfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~If 461 (893)
T KOG0291|consen 382 GFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIF 461 (893)
T ss_pred ceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEE
Confidence 999999999999999999999999999999999997 5678999999999999999886 699
Q ss_pred EEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCC-CeEEEEecCCcEEEEeCCCCccc
Q psy7433 148 VWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG-SRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 148 v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
+|++++|+.+..+.+|. ++|.+++|+|. ..|++++.|.+||+||+-.....
T Consensus 462 vWS~qTGqllDiLsGHE----------gPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~ 513 (893)
T KOG0291|consen 462 VWSVQTGQLLDILSGHE----------GPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGT 513 (893)
T ss_pred EEEeecCeeeehhcCCC----------CcceeeEEccccCeEEeccccceEEEEEeeccCce
Confidence 99999999999999998 89999999995 46999999999999999876433
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-29 Score=181.44 Aligned_cols=190 Identities=22% Similarity=0.358 Sum_probs=167.7
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
+|++|.++|.+++|+|++++|+++ +.++.|++|++ ........+..|...+..+.|+|+++++++++.++.|++
T Consensus 4 ~~~~h~~~i~~~~~~~~~~~l~~~---~~~g~i~i~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i 77 (289)
T cd00200 4 TLKGHTGGVTCVAFSPDGKLLATG---SGDGTIKVWDL---ETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRL 77 (289)
T ss_pred HhcccCCCEEEEEEcCCCCEEEEe---ecCcEEEEEEe---eCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEE
Confidence 678999999999999999999999 67999999998 445566777788888999999999999999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCCC
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDG 144 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg 144 (213)
||+.+++....+..+...+.++.|+|+++.+++++.++.+. ..+.++.|+|+++++++++.++
T Consensus 78 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~ 157 (289)
T cd00200 78 WDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDG 157 (289)
T ss_pred EEcCcccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCCC
Confidence 99998888888888888999999999988888888788765 4689999999999999998899
Q ss_pred cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCcc
Q psy7433 145 DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 145 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~ 207 (213)
.|++||+++++.+..+..+. ..+.++.|+|++ .+++++.|+.+++||+...+.
T Consensus 158 ~i~i~d~~~~~~~~~~~~~~----------~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~ 211 (289)
T cd00200 158 TIKLWDLRTGKCVATLTGHT----------GEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKC 211 (289)
T ss_pred cEEEEEccccccceeEecCc----------cccceEEECCCcCEEEEecCCCcEEEEECCCCce
Confidence 99999999888887777654 689999999976 688888899999999987543
|
|
| >KOG0273|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=183.93 Aligned_cols=188 Identities=22% Similarity=0.406 Sum_probs=167.5
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCc--------------------------------------c
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLP--------------------------------------Q 43 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~--------------------------------------~ 43 (213)
+|..|+++|.++.|+..|.+|+++ +.|+++.+||.-.+ .
T Consensus 271 tl~~HkgPI~slKWnk~G~yilS~---~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~ 347 (524)
T KOG0273|consen 271 TLGQHKGPIFSLKWNKKGTYILSG---GVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQSNDEFATSSTDGCIHVCKVG 347 (524)
T ss_pred hhhccCCceEEEEEcCCCCEEEec---cCCccEEEEeccCceEEEeeeeccCCccceEEecCceEeecCCCceEEEEEec
Confidence 577899999999999999999999 69999999997221 1
Q ss_pred cccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCC---------CEEEE
Q psy7433 44 KKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHE---------EFFVT 114 (213)
Q Consensus 44 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~---------~~l~~ 114 (213)
...++.++.+|.++|.++.|+|.+.+|+++++|++++||..........+..|...|..+.|+|++ ..+++
T Consensus 348 ~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~s 427 (524)
T KOG0273|consen 348 EDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLAS 427 (524)
T ss_pred CCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEE
Confidence 123456677899999999999999999999999999999999888889999999999999999965 36899
Q ss_pred ecCCCcee-----------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCe
Q psy7433 115 GAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGV 177 (213)
Q Consensus 115 ~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v 177 (213)
++.|++++ .+|++++|+|+|+++++|+.||.|++|+.++++....+.+. +.|
T Consensus 428 as~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~~~~l~~s~~~~-----------~~I 496 (524)
T KOG0273|consen 428 ASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTKTGKLVKSYQGT-----------GGI 496 (524)
T ss_pred eecCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEEecCCCCeeEeccccchheeEeecCC-----------CeE
Confidence 99999887 89999999999999999999999999999999999999875 579
Q ss_pred EEEEeCC-CCeEEEEecCCcEEEEeCC
Q psy7433 178 TQLHVDG-GSRLFSCGADGSMKVRQLP 203 (213)
Q Consensus 178 ~~~~~~~-~~~l~s~~~d~~i~iw~~~ 203 (213)
..++|+. +++|..+-.|+.+++-|++
T Consensus 497 fel~Wn~~G~kl~~~~sd~~vcvldlr 523 (524)
T KOG0273|consen 497 FELCWNAAGDKLGACASDGSVCVLDLR 523 (524)
T ss_pred EEEEEcCCCCEEEEEecCCCceEEEec
Confidence 9999996 5678888899999999875
|
|
| >KOG0640|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-30 Score=180.76 Aligned_cols=196 Identities=20% Similarity=0.400 Sum_probs=167.8
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCC------c---------ccccceeeeeeecCCceEEEEecCC
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLL------P---------QKKALVQAFVCHDQGASSLVFAPQH 67 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~------~---------~~~~~~~~~~~~~~~v~~~~~~~~~ 67 (213)
+..|++++++.+|+|||.++|+| +.|..|+|.|++. + .....++++..|..+|+++.|+|..
T Consensus 108 lt~HK~~cR~aafs~DG~lvATG---saD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre 184 (430)
T KOG0640|consen 108 LTSHKSPCRAAAFSPDGSLVATG---SADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRE 184 (430)
T ss_pred EeecccceeeeeeCCCCcEEEcc---CCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchh
Confidence 56799999999999999999999 7999999999851 0 1124678888999999999999999
Q ss_pred CEEEEEcCCCcEEEEeccCceEEEecc--cCCCCeeEEEecCCCCEEEEecCCCcee--------------------ece
Q psy7433 68 QLLISAGKKGDICVIDLRQRVIRSRFN--AHESPVKCLAIDPHEEFFVTGAGDGDIK--------------------SPV 125 (213)
Q Consensus 68 ~~l~~~~~d~~v~iwd~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~~~~i~--------------------~~v 125 (213)
.+|++++.|++|++||.......+.++ ....++.+++|+|.|.++++|.....++ ..|
T Consensus 185 ~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd~qht~ai 264 (430)
T KOG0640|consen 185 TILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGAI 264 (430)
T ss_pred heEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecCcccccccce
Confidence 999999999999999997653333222 2456899999999999999999888776 789
Q ss_pred EEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCC
Q psy7433 126 KCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 126 ~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~ 204 (213)
+++.+++.+++.++|+.||.|++||--+++++.++...+. +..|.+..|..++ ++++.+.|..+++|++.+
T Consensus 265 ~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~--------gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t 336 (430)
T KOG0640|consen 265 TQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHG--------GSEVCSAVFTKNGKYILSSGKDSTVKLWEIST 336 (430)
T ss_pred eEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcC--------CceeeeEEEccCCeEEeecCCcceeeeeeecC
Confidence 9999999999999999999999999988999988876543 4789999999755 689999999999999999
Q ss_pred Ccccc
Q psy7433 205 RDAVV 209 (213)
Q Consensus 205 ~~~~~ 209 (213)
++.+.
T Consensus 337 ~R~l~ 341 (430)
T KOG0640|consen 337 GRMLK 341 (430)
T ss_pred CceEE
Confidence 87654
|
|
| >KOG0296|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-29 Score=176.83 Aligned_cols=155 Identities=21% Similarity=0.364 Sum_probs=140.9
Q ss_pred CccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEE
Q psy7433 1 MTYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDIC 80 (213)
Q Consensus 1 ~~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 80 (213)
.+|..|+++|.+++.+|+.+++||| +.|..-.+|+. .++.....+.+|...|+++.|+.+|.+||+|+.+|.|+
T Consensus 58 ~tF~~H~~svFavsl~P~~~l~aTG---GgDD~AflW~~---~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~ 131 (399)
T KOG0296|consen 58 VTFDKHTDSVFAVSLHPNNNLVATG---GGDDLAFLWDI---STGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVL 131 (399)
T ss_pred eehhhcCCceEEEEeCCCCceEEec---CCCceEEEEEc---cCCcceeEecCCCCceEEEEEccCceEEEecCCCccEE
Confidence 3688999999999999999999999 58999999999 56678888999999999999999999999999999999
Q ss_pred EEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCC
Q psy7433 81 VIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGD 143 (213)
Q Consensus 81 iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~d 143 (213)
+|+..++.....+...-..+.-+.|+|.+..|+.|+.||.+. .++++-.|.|+|+.++++..|
T Consensus 132 v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~d 211 (399)
T KOG0296|consen 132 VFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDD 211 (399)
T ss_pred EEEcccCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccCCCceEEEEecC
Confidence 999999988888766667788999999999999999999885 678889999999999999999
Q ss_pred CcEEEEEccCCeeeeeec
Q psy7433 144 GDIKVWSLSGNHLLYNFP 161 (213)
Q Consensus 144 g~i~v~d~~~~~~~~~~~ 161 (213)
|+|++||++++.++..+.
T Consensus 212 gti~~Wn~ktg~p~~~~~ 229 (399)
T KOG0296|consen 212 GTIIVWNPKTGQPLHKIT 229 (399)
T ss_pred ceEEEEecCCCceeEEec
Confidence 999999999887766554
|
|
| >KOG0276|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-29 Score=190.11 Aligned_cols=191 Identities=21% Similarity=0.370 Sum_probs=177.9
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
+|..|+.+|.++.|+|....++++ -.+|.|.||+. +++..++.+.-.+.+|++.+|-+..+.+++|++|..|++
T Consensus 8 k~~~rSdRVKsVd~HPtePw~la~---LynG~V~IWny---etqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrV 81 (794)
T KOG0276|consen 8 KFQSRSDRVKSVDFHPTEPWILAA---LYNGDVQIWNY---ETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRV 81 (794)
T ss_pred HhhccCCceeeeecCCCCceEEEe---eecCeeEEEec---ccceeeeeeeecccchhhheeeeccceEEEecCCceEEE
Confidence 466789999999999999999988 68999999998 788899999988999999999999999999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee------------------eceEEEEEccC-CceEEEecC
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------SPVKCLAIDPH-EEFFVTGAG 142 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------~~v~~~~~~~~-~~~l~~~~~ 142 (213)
|+..+++.+..|..|.+.|++++.+|...++++++.|-.++ .-|++++|+|. .+.+++++-
T Consensus 82 fnynt~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sL 161 (794)
T KOG0276|consen 82 FNYNTGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASL 161 (794)
T ss_pred EecccceeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeec
Confidence 99999999999999999999999999999999999999997 77999999995 559999999
Q ss_pred CCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC---eEEEEecCCcEEEEeCCCCccc
Q psy7433 143 DGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS---RLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 143 dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
|++|+||.+.+..+.+++++|. ..|+++.+-+.+ +|++|+.|..++|||..+..++
T Consensus 162 DrTVKVWslgs~~~nfTl~gHe----------kGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV 220 (794)
T KOG0276|consen 162 DRTVKVWSLGSPHPNFTLEGHE----------KGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCV 220 (794)
T ss_pred cccEEEEEcCCCCCceeeeccc----------cCcceEEeccCCCcceEEecCCCceEEEeecchHHHH
Confidence 9999999999999999999987 789999998865 7999999999999999987544
|
|
| >KOG0292|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=196.30 Aligned_cols=191 Identities=18% Similarity=0.343 Sum_probs=175.1
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
.|.+|.++|+.++|+|.+.+|++| ..|-.|++|+. .+.+++-++.+|-..|+.+.|++.-..++++++|-+|+|
T Consensus 46 rFdeHdGpVRgv~FH~~qplFVSG---GDDykIkVWnY---k~rrclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrI 119 (1202)
T KOG0292|consen 46 RFDEHDGPVRGVDFHPTQPLFVSG---GDDYKIKVWNY---KTRRCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRI 119 (1202)
T ss_pred hhhccCCccceeeecCCCCeEEec---CCccEEEEEec---ccceehhhhccccceeEEeeccCCCceEEEccCCCeEEE
Confidence 367899999999999999999999 48999999999 788999999999999999999999999999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee---------------------------------------
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK--------------------------------------- 122 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~--------------------------------------- 122 (213)
|+..+++++..+.+|...|.|.+|+|....+++++-|.+++
T Consensus 120 WNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK 199 (1202)
T KOG0292|consen 120 WNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVK 199 (1202)
T ss_pred EeccCCceEEEEecCceEEEeeccCCccceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeee
Confidence 99999999999999999999999999999999999999987
Q ss_pred -------eceEEEEEccCCceEEEecCCCcEEEEEccCCe--eeeeecCCCCceeEEEecCCCeEEEEeCC-CCeEEEEe
Q psy7433 123 -------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNH--LLYNFPGEHARSSFFKHIGQGVTQLHVDG-GSRLFSCG 192 (213)
Q Consensus 123 -------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~s~~ 192 (213)
..|+-++|+|.-.++++|+.|..|++|.+...+ .+-+..+|. ..|.++-|+| ++.++|.|
T Consensus 200 ~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKaWEvDtcrgH~----------nnVssvlfhp~q~lIlSns 269 (1202)
T KOG0292|consen 200 HVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTCRGHY----------NNVSSVLFHPHQDLILSNS 269 (1202)
T ss_pred eeecccccccceEEecCCcceEEecCCcceeeEEEeccccceeehhhhccc----------CCcceEEecCccceeEecC
Confidence 678889999999999999999999999996544 345566776 7899999999 56899999
Q ss_pred cCCcEEEEeCCCCccc
Q psy7433 193 ADGSMKVRQLPDRDAV 208 (213)
Q Consensus 193 ~d~~i~iw~~~~~~~~ 208 (213)
.|++|++||+.....+
T Consensus 270 EDksirVwDm~kRt~v 285 (1202)
T KOG0292|consen 270 EDKSIRVWDMTKRTSV 285 (1202)
T ss_pred CCccEEEEecccccce
Confidence 9999999999877543
|
|
| >KOG0276|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-29 Score=190.24 Aligned_cols=188 Identities=18% Similarity=0.327 Sum_probs=171.9
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEE
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVI 82 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iw 82 (213)
++--.-+|++..|-+..+++++| +.|..|++|+. .+...++.+.+|...|++++.+|...+++++++|-.|++|
T Consensus 51 feV~~~PvRa~kfiaRknWiv~G---sDD~~IrVfny---nt~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW 124 (794)
T KOG0276|consen 51 FEVSEVPVRAAKFIARKNWIVTG---SDDMQIRVFNY---NTGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLW 124 (794)
T ss_pred eeecccchhhheeeeccceEEEe---cCCceEEEEec---ccceeeEEeeccccceeeeeecCCCCeEEecCCccEEEEe
Confidence 33445688999999999999999 89999999999 7888999999999999999999999999999999999999
Q ss_pred eccCc-eEEEecccCCCCeeEEEecC-CCCEEEEecCCCcee-----------------eceEEEEEccCC--ceEEEec
Q psy7433 83 DLRQR-VIRSRFNAHESPVKCLAIDP-HEEFFVTGAGDGDIK-----------------SPVKCLAIDPHE--EFFVTGA 141 (213)
Q Consensus 83 d~~~~-~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~--~~l~~~~ 141 (213)
|.+.. .+.+.+.+|...|.+++|+| |.+.|++++.|++++ ..|+|+.|-+.| .+|++|+
T Consensus 125 ~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsga 204 (794)
T KOG0276|consen 125 DWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGA 204 (794)
T ss_pred eccCceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecC
Confidence 99875 77889999999999999999 678999999999998 789999998855 4999999
Q ss_pred CCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCC-CeEEEEecCCcEEEEeCCCCc
Q psy7433 142 GDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG-SRLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 142 ~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~d~~i~iw~~~~~~ 206 (213)
.|..++|||.++..+++++++|. .-|..+.|+|. ..+++|+.||++|||+-.+-+
T Consensus 205 DD~tiKvWDyQtk~CV~TLeGHt----------~Nvs~v~fhp~lpiiisgsEDGTvriWhs~Ty~ 260 (794)
T KOG0276|consen 205 DDLTIKVWDYQTKSCVQTLEGHT----------NNVSFVFFHPELPIIISGSEDGTVRIWNSKTYK 260 (794)
T ss_pred CCceEEEeecchHHHHHHhhccc----------ccceEEEecCCCcEEEEecCCccEEEecCccee
Confidence 99999999999999999999997 68999999995 579999999999999987653
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.8e-28 Score=187.23 Aligned_cols=192 Identities=13% Similarity=0.177 Sum_probs=146.2
Q ss_pred ccccccCceEEEEEeCC-CCeEEEeeccCCCccEEEEeCCCccc-----ccceeeeeeecCCceEEEEecCCCE-EEEEc
Q psy7433 2 TYQCHNKITSDFVFLGS-CSLVATAGHSSESKNVCLWDSLLPQK-----KALVQAFVCHDQGASSLVFAPQHQL-LISAG 74 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~-~~~l~~~g~~s~~~~i~iwd~~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~ 74 (213)
+|.+|.++|.+++|+|+ +.+||++ +.|+.|+|||+..... ...+..+.+|...|.+++|+|++.. |++++
T Consensus 69 ~L~gH~~~V~~lafsP~~~~lLASg---S~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS 145 (568)
T PTZ00420 69 KLKGHTSSILDLQFNPCFSEILASG---SEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSG 145 (568)
T ss_pred EEcCCCCCEEEEEEcCCCCCEEEEE---eCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEe
Confidence 47899999999999996 7899999 7899999999953211 1234467789999999999998865 57889
Q ss_pred CCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------ec-----eEEEEEcc
Q psy7433 75 KKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SP-----VKCLAIDP 132 (213)
Q Consensus 75 ~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~-----v~~~~~~~ 132 (213)
.|+.|++||+++++....+. +...|.+++|+|+|..|++++.|+.++ .. +....|++
T Consensus 146 ~DgtIrIWDl~tg~~~~~i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~ 224 (568)
T PTZ00420 146 FDSFVNIWDIENEKRAFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGKNTKNIWIDGLGG 224 (568)
T ss_pred CCCeEEEEECCCCcEEEEEe-cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEecccCCceeEEEEeeeEcC
Confidence 99999999999998776665 567899999999999999999998776 11 12234568
Q ss_pred CCceEEEecCCC----cEEEEEccC-CeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCC
Q psy7433 133 HEEFFVTGAGDG----DIKVWSLSG-NHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 133 ~~~~l~~~~~dg----~i~v~d~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~ 205 (213)
++.+|++++.++ .|++||+++ .+++..+..+.. .+.+......+++ ++++|+.|+.|++|++..+
T Consensus 225 d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~--------~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~~~~ 295 (568)
T PTZ00420 225 DDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNA--------SAPLIPHYDESTGLIYLIGKGDGNCRYYQHSLG 295 (568)
T ss_pred CCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCC--------ccceEEeeeCCCCCEEEEEECCCeEEEEEccCC
Confidence 888888877664 799999985 555555443321 1223233333434 5788999999999999765
|
|
| >KOG0277|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-29 Score=170.60 Aligned_cols=189 Identities=19% Similarity=0.307 Sum_probs=161.9
Q ss_pred cCceEEEEEeCC-CCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec-CCCEEEEEcCCCcEEEEec
Q psy7433 7 NKITSDFVFLGS-CSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP-QHQLLISAGKKGDICVIDL 84 (213)
Q Consensus 7 ~~~v~~~~~~~~-~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~iwd~ 84 (213)
...+..++|+++ .+.++++ +.||+++|||+. ....++..++.|..+|.++.|++ +...+++++.|++|++|+.
T Consensus 60 ~D~LfdV~Wse~~e~~~~~a---~GDGSLrl~d~~--~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~ 134 (311)
T KOG0277|consen 60 EDGLFDVAWSENHENQVIAA---SGDGSLRLFDLT--MPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDP 134 (311)
T ss_pred ccceeEeeecCCCcceEEEE---ecCceEEEeccC--CCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecC
Confidence 456889999995 4456666 689999999974 55668899999999999999998 6677888899999999999
Q ss_pred cCceEEEecccCCCCeeEEEecC-CCCEEEEecCCCcee-----------------eceEEEEEccC-CceEEEecCCCc
Q psy7433 85 RQRVIRSRFNAHESPVKCLAIDP-HEEFFVTGAGDGDIK-----------------SPVKCLAIDPH-EEFFVTGAGDGD 145 (213)
Q Consensus 85 ~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~-~~~l~~~~~dg~ 145 (213)
..++.++++.+|...|...+|+| ..+.|++++.|+.++ ..+.|+.|+.- ..++++|+.|+.
T Consensus 135 ~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~ 214 (311)
T KOG0277|consen 135 NRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVDNL 214 (311)
T ss_pred CCCcceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEecCCCce
Confidence 99999999999999999999999 678999999999887 57899999985 458999999999
Q ss_pred EEEEEccCC-eeeeeecCCCCceeEEEecCCCeEEEEeCCC--CeEEEEecCCcEEEEeCCCCccccc
Q psy7433 146 IKVWSLSGN-HLLYNFPGEHARSSFFKHIGQGVTQLHVDGG--SRLFSCGADGSMKVRQLPDRDAVVH 210 (213)
Q Consensus 146 i~v~d~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~l~s~~~d~~i~iw~~~~~~~~~~ 210 (213)
|+.||+++. .++..+.+|. -.|..+.|+|. ..|++++.|-++||||...+...++
T Consensus 215 vr~wDir~~r~pl~eL~gh~----------~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~ds~~e 272 (311)
T KOG0277|consen 215 VRGWDIRNLRTPLFELNGHG----------LAVRKVKFSPHHASLLASASYDMTVRIWDPERQDSAIE 272 (311)
T ss_pred EEEEehhhccccceeecCCc----------eEEEEEecCcchhhHhhhccccceEEecccccchhhhh
Confidence 999999854 4677777775 78999999995 4699999999999999986654433
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.4e-28 Score=197.68 Aligned_cols=188 Identities=16% Similarity=0.255 Sum_probs=157.4
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcc-cc----cceeeeeeecCCceEEEEec-CCCEEEEEcCC
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQ-KK----ALVQAFVCHDQGASSLVFAP-QHQLLISAGKK 76 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~-~~----~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d 76 (213)
+..|.+.|.+++|+|++++||++ +.|+.|+||+.+... .. .....+. +...+.+++|++ .+.+|++++.|
T Consensus 479 ~~~~~~~V~~i~fs~dg~~latg---g~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~~las~~~D 554 (793)
T PLN00181 479 LLNSSNLVCAIGFDRDGEFFATA---GVNKKIKIFECESIIKDGRDIHYPVVELA-SRSKLSGICWNSYIKSQVASSNFE 554 (793)
T ss_pred ccCCCCcEEEEEECCCCCEEEEE---eCCCEEEEEECCcccccccccccceEEec-ccCceeeEEeccCCCCEEEEEeCC
Confidence 34589999999999999999999 689999999974210 01 1122222 346789999987 57899999999
Q ss_pred CcEEEEeccCceEEEecccCCCCeeEEEecC-CCCEEEEecCCCcee----------------eceEEEEEc-cCCceEE
Q psy7433 77 GDICVIDLRQRVIRSRFNAHESPVKCLAIDP-HEEFFVTGAGDGDIK----------------SPVKCLAID-PHEEFFV 138 (213)
Q Consensus 77 ~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~i~----------------~~v~~~~~~-~~~~~l~ 138 (213)
|.|++||+.+++.+..+.+|...|++++|+| ++.+|++++.|+.++ ..+.++.|+ +++.+|+
T Consensus 555 g~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~g~~la 634 (793)
T PLN00181 555 GVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANICCVQFPSESGRSLA 634 (793)
T ss_pred CeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecCCCeEEEEEeCCCCCEEE
Confidence 9999999999999999999999999999997 788999999999887 467888995 5689999
Q ss_pred EecCCCcEEEEEccCCe-eeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCC
Q psy7433 139 TGAGDGDIKVWSLSGNH-LLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 139 ~~~~dg~i~v~d~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~ 204 (213)
+|+.||.|++||+++.+ .+..+.+|. ..|.++.|.++..|++++.|+.|++||+..
T Consensus 635 tgs~dg~I~iwD~~~~~~~~~~~~~h~----------~~V~~v~f~~~~~lvs~s~D~~ikiWd~~~ 691 (793)
T PLN00181 635 FGSADHKVYYYDLRNPKLPLCTMIGHS----------KTVSYVRFVDSSTLVSSSTDNTLKLWDLSM 691 (793)
T ss_pred EEeCCCeEEEEECCCCCccceEecCCC----------CCEEEEEEeCCCEEEEEECCCEEEEEeCCC
Confidence 99999999999998765 455666665 689999998777899999999999999974
|
|
| >KOG0296|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.6e-28 Score=170.85 Aligned_cols=185 Identities=17% Similarity=0.332 Sum_probs=168.7
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
.+.+|+..|.++.|+.+|.+|||+ .-+|.|+||+. .++.....+...-..+.=++|+|.+.+|++|+.||.+-+
T Consensus 101 eltgHKDSVt~~~FshdgtlLATG---dmsG~v~v~~~---stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWm 174 (399)
T KOG0296|consen 101 ELTGHKDSVTCCSFSHDGTLLATG---DMSGKVLVFKV---STGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWM 174 (399)
T ss_pred EecCCCCceEEEEEccCceEEEec---CCCccEEEEEc---ccCceEEEeecccCceEEEEecccccEEEeecCCCcEEE
Confidence 577999999999999999999999 68999999998 555555555545667888999999999999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee---------------------------------------
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK--------------------------------------- 122 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~--------------------------------------- 122 (213)
|.+.++...+.+.+|..++++=.|.|+|+.++++..|++++
T Consensus 175 w~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e 254 (399)
T KOG0296|consen 175 WQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSE 254 (399)
T ss_pred EECCCcceeeEecCCCCCcccccccCCCceEEEEecCceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCC
Confidence 99999888889999999999999999999999999999986
Q ss_pred -------------------------------------------------------------------------eceEEEE
Q psy7433 123 -------------------------------------------------------------------------SPVKCLA 129 (213)
Q Consensus 123 -------------------------------------------------------------------------~~v~~~~ 129 (213)
.+|..+.
T Consensus 255 ~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c~he~~V~~l~ 334 (399)
T KOG0296|consen 255 GVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAASTLRHICEHEDGVTKLK 334 (399)
T ss_pred ccEEEEccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccccceEEEEecccchhheeccCCCceEEEE
Confidence 6789999
Q ss_pred EccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCC
Q psy7433 130 IDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLP 203 (213)
Q Consensus 130 ~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~ 203 (213)
|-+ ..+|++++.+|.|+.||.|+++++..+.+|+ ..|.+++.+|+. +++|+|.|+..+||++.
T Consensus 335 w~~-t~~l~t~c~~g~v~~wDaRtG~l~~~y~GH~----------~~Il~f~ls~~~~~vvT~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 335 WLN-TDYLLTACANGKVRQWDARTGQLKFTYTGHQ----------MGILDFALSPQKRLVVTVSDDNTALVFEVP 398 (399)
T ss_pred EcC-cchheeeccCceEEeeeccccceEEEEecCc----------hheeEEEEcCCCcEEEEecCCCeEEEEecC
Confidence 998 7899999999999999999999999999998 789999999975 58999999999999875
|
|
| >KOG0319|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.8e-29 Score=189.84 Aligned_cols=194 Identities=24% Similarity=0.383 Sum_probs=168.3
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCc-ccccceeeeeeecCCceEEEEecCC-CEEEEEcCCCcE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLP-QKKALVQAFVCHDQGASSLVFAPQH-QLLISAGKKGDI 79 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v 79 (213)
.+.||+..|.+++...+|.+|+++ +.|.++++|.+++. .+..++....+|.+.|.+++++..+ ..|++++.|+++
T Consensus 360 ii~GH~e~vlSL~~~~~g~llat~---sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tl 436 (775)
T KOG0319|consen 360 IIPGHTEAVLSLDVWSSGDLLATG---SKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTL 436 (775)
T ss_pred EEeCchhheeeeeecccCcEEEEe---cCCceEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceE
Confidence 478999999999977788999999 89999999988432 3345667778999999999998754 689999999999
Q ss_pred EEEeccCceE-----E----EecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccC
Q psy7433 80 CVIDLRQRVI-----R----SRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPH 133 (213)
Q Consensus 80 ~iwd~~~~~~-----~----~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~ 133 (213)
++|++...+. . .....|...|++++.+|+.+.+++|+.|++.+ ..+.|+.|+|.
T Consensus 437 K~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~ 516 (775)
T KOG0319|consen 437 KLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKN 516 (775)
T ss_pred EEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEecccccceeeecccCceEEEEeeCCccceEEEEeccc
Confidence 9999976211 1 12245889999999999999999999999886 78999999999
Q ss_pred CceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCC-CCeEEEEecCCcEEEEeCCCCccc
Q psy7433 134 EEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG-GSRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 134 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
.+.++++|.|.+|+||.+.+..++.++.+|. ..|..+.|-. +.+|++++.||.+++|++.++.+.
T Consensus 517 dq~laT~SgD~TvKIW~is~fSClkT~eGH~----------~aVlra~F~~~~~qliS~~adGliKlWnikt~eC~ 582 (775)
T KOG0319|consen 517 DQLLATCSGDKTVKIWSISTFSCLKTFEGHT----------SAVLRASFIRNGKQLISAGADGLIKLWNIKTNECE 582 (775)
T ss_pred cceeEeccCCceEEEEEeccceeeeeecCcc----------ceeEeeeeeeCCcEEEeccCCCcEEEEeccchhhh
Confidence 9999999999999999999999999999997 7898888875 567999999999999999998654
|
|
| >KOG0295|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-28 Score=173.21 Aligned_cols=185 Identities=19% Similarity=0.341 Sum_probs=171.6
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
.+.+|...|.++.|-|.|.+++++ +.|.+|+.|++ .++.++.++++|...|..++.+.||.++++++.|.+|++
T Consensus 188 s~~gh~h~vS~V~f~P~gd~ilS~---srD~tik~We~---~tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~v 261 (406)
T KOG0295|consen 188 SLIGHEHGVSSVFFLPLGDHILSC---SRDNTIKAWEC---DTGYCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRV 261 (406)
T ss_pred HhcCcccceeeEEEEecCCeeeec---ccccceeEEec---ccceeEEeccCchHhEEEEEecCCeeEEEecCCCceEEE
Confidence 356899999999999999999999 79999999999 788999999999999999999999999999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCC----------C-----CEEEEecCCCcee-----------------eceEEEE
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPH----------E-----EFFVTGAGDGDIK-----------------SPVKCLA 129 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~----------~-----~~l~~~~~~~~i~-----------------~~v~~~~ 129 (213)
|-+.++++...++.|..++.|++|-|. + .++.+++.|++|+ ..|..++
T Consensus 262 W~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~a 341 (406)
T KOG0295|consen 262 WVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVA 341 (406)
T ss_pred EEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeE
Confidence 999999888889999999999999763 2 4789999999998 8999999
Q ss_pred EccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCC-CeEEEEecCCcEEEEeC
Q psy7433 130 IDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG-SRLFSCGADGSMKVRQL 202 (213)
Q Consensus 130 ~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~d~~i~iw~~ 202 (213)
|+|.|+||+++.+|+++++||+++.++..+++.|. .-+++++|+.+ .++++|+-|..+++|..
T Consensus 342 f~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~----------hfvt~lDfh~~~p~VvTGsVdqt~KvwEc 405 (406)
T KOG0295|consen 342 FSPGGKYILSCADDKTLRVWDLKNLQCMKTLEAHE----------HFVTSLDFHKTAPYVVTGSVDQTVKVWEC 405 (406)
T ss_pred EcCCCeEEEEEecCCcEEEEEeccceeeeccCCCc----------ceeEEEecCCCCceEEeccccceeeeeec
Confidence 99999999999999999999999999999999876 67999999864 47999999999999974
|
|
| >KOG0278|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.6e-29 Score=168.31 Aligned_cols=188 Identities=17% Similarity=0.280 Sum_probs=164.5
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEec
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDL 84 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~ 84 (213)
.|+.-|.+++|+.|.++|+++ +.+..++|||++ ....+...+.+|.+.|..+-|....+.+++..+|+.|++||.
T Consensus 98 ~hkhivk~~af~~ds~~lltg---g~ekllrvfdln--~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~ 172 (334)
T KOG0278|consen 98 EHKHIVKAVAFSQDSNYLLTG---GQEKLLRVFDLN--RPKAPPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDH 172 (334)
T ss_pred hhhheeeeEEecccchhhhcc---chHHHhhhhhcc--CCCCCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEe
Confidence 478889999999999999999 589999999996 344566778899999999999998888999899999999999
Q ss_pred cCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee---------------eceEEEEEccCCceEEEecCCCcEEEE
Q psy7433 85 RQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK---------------SPVKCLAIDPHEEFFVTGAGDGDIKVW 149 (213)
Q Consensus 85 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~---------------~~v~~~~~~~~~~~l~~~~~dg~i~v~ 149 (213)
+++..++.+. ...+++++.++++|+++.++...+... ..|.+.+++|+...+++|++|..++.|
T Consensus 173 rTgt~v~sL~-~~s~VtSlEvs~dG~ilTia~gssV~Fwdaksf~~lKs~k~P~nV~SASL~P~k~~fVaGged~~~~kf 251 (334)
T KOG0278|consen 173 RTGTEVQSLE-FNSPVTSLEVSQDGRILTIAYGSSVKFWDAKSFGLLKSYKMPCNVESASLHPKKEFFVAGGEDFKVYKF 251 (334)
T ss_pred ccCcEEEEEe-cCCCCcceeeccCCCEEEEecCceeEEeccccccceeeccCccccccccccCCCceEEecCcceEEEEE
Confidence 9999999887 678899999999999887765544332 778999999999999999999999999
Q ss_pred EccCCeeeeee-cCCCCceeEEEecCCCeEEEEeCCCCe-EEEEecCCcEEEEeCCCCccc
Q psy7433 150 SLSGNHLLYNF-PGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 150 d~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~d~~i~iw~~~~~~~~ 208 (213)
|..+++.+..+ .+|. ++|.|+.|+|++. .++|+.||+|++|....++..
T Consensus 252 Dy~TgeEi~~~nkgh~----------gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~~~~ 302 (334)
T KOG0278|consen 252 DYNTGEEIGSYNKGHF----------GPVHCVRFSPDGELYASGSEDGTIRLWQTTPGKTY 302 (334)
T ss_pred eccCCceeeecccCCC----------CceEEEEECCCCceeeccCCCceEEEEEecCCCch
Confidence 99999998886 6665 8999999999775 789999999999998876543
|
|
| >KOG0281|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-30 Score=181.13 Aligned_cols=182 Identities=21% Similarity=0.413 Sum_probs=158.7
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
+|.||++.|.|+.|. .+.+++| +.|.+|++||+ +++++++++-.|...|..+.|+ +.++++++.|.++.+
T Consensus 232 ~L~GHtGSVLCLqyd--~rviisG---SSDsTvrvWDv---~tge~l~tlihHceaVLhlrf~--ng~mvtcSkDrsiaV 301 (499)
T KOG0281|consen 232 ILTGHTGSVLCLQYD--ERVIVSG---SSDSTVRVWDV---NTGEPLNTLIHHCEAVLHLRFS--NGYMVTCSKDRSIAV 301 (499)
T ss_pred hhhcCCCcEEeeecc--ceEEEec---CCCceEEEEec---cCCchhhHHhhhcceeEEEEEe--CCEEEEecCCceeEE
Confidence 678999999999984 5688888 89999999999 7888999999999999999996 459999999999999
Q ss_pred EeccCce---EEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEec
Q psy7433 82 IDLRQRV---IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGA 141 (213)
Q Consensus 82 wd~~~~~---~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~ 141 (213)
||+.+.. ..+.+.+|...|..+.|+ .+++++++.|.+++ ..|.|+.+. ++++++|+
T Consensus 302 Wdm~sps~it~rrVLvGHrAaVNvVdfd--~kyIVsASgDRTikvW~~st~efvRtl~gHkRGIAClQYr--~rlvVSGS 377 (499)
T KOG0281|consen 302 WDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGS 377 (499)
T ss_pred EeccCchHHHHHHHHhhhhhheeeeccc--cceEEEecCCceEEEEeccceeeehhhhcccccceehhcc--CeEEEecC
Confidence 9998763 234457899999999997 56999999999998 556666665 78999999
Q ss_pred CCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCccc
Q psy7433 142 GDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 142 ~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
.|.+|++||+..|.++..+++|. .-|.++.|+ +.++++|+.||+|++||+.....+
T Consensus 378 SDntIRlwdi~~G~cLRvLeGHE----------eLvRciRFd-~krIVSGaYDGkikvWdl~aaldp 433 (499)
T KOG0281|consen 378 SDNTIRLWDIECGACLRVLEGHE----------ELVRCIRFD-NKRIVSGAYDGKIKVWDLQAALDP 433 (499)
T ss_pred CCceEEEEeccccHHHHHHhchH----------Hhhhheeec-CceeeeccccceEEEEecccccCC
Confidence 99999999999999999999997 579999997 458999999999999999876443
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.5e-27 Score=170.18 Aligned_cols=189 Identities=26% Similarity=0.435 Sum_probs=164.2
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
.+.+|...+..+.|+|++++++++ +.++.|++|++ ...+.+..+..|...+.++.|+++++++++++.++.+.+
T Consensus 46 ~~~~~~~~i~~~~~~~~~~~l~~~---~~~~~i~i~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~ 119 (289)
T cd00200 46 TLKGHTGPVRDVAASADGTYLASG---SSDKTIRLWDL---ETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKV 119 (289)
T ss_pred EEecCCcceeEEEECCCCCEEEEE---cCCCeEEEEEc---CcccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEE
Confidence 356788899999999999999999 68999999999 444667777788889999999999888988888999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCCC
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDG 144 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg 144 (213)
||+++++....+..+...+.+++|+|++.++++++.++.+. ..+.++.|+|+++.+++++.++
T Consensus 120 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~ 199 (289)
T cd00200 120 WDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDG 199 (289)
T ss_pred EECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEccccccceeEecCccccceEEECCCcCEEEEecCCC
Confidence 99999888888888889999999999988888888788775 4789999999999999999999
Q ss_pred cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEecCCcEEEEeCCCCc
Q psy7433 145 DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 145 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~d~~i~iw~~~~~~ 206 (213)
.|++||++.++.+..+..+. ..+.++.|+|++. +++++.|+.+++|++.++.
T Consensus 200 ~i~i~d~~~~~~~~~~~~~~----------~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~ 252 (289)
T cd00200 200 TIKLWDLSTGKCLGTLRGHE----------NGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGE 252 (289)
T ss_pred cEEEEECCCCceecchhhcC----------CceEEEEEcCCCcEEEEEcCCCcEEEEEcCCce
Confidence 99999999888888776654 6899999999665 5555569999999998654
|
|
| >KOG0313|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.4e-28 Score=171.35 Aligned_cols=186 Identities=19% Similarity=0.360 Sum_probs=164.3
Q ss_pred ccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCc----------------------ccccceeeeeeecCCceEE
Q psy7433 4 QCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLP----------------------QKKALVQAFVCHDQGASSL 61 (213)
Q Consensus 4 ~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~----------------------~~~~~~~~~~~~~~~v~~~ 61 (213)
+||.+.|-+++..++|..++++ +.|.+|+||+.... ....++..+.+|..+|.++
T Consensus 190 ~GHk~~V~sVsv~~sgtr~~Sg---S~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V 266 (423)
T KOG0313|consen 190 RGHKRSVDSVSVDSSGTRFCSG---SWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSV 266 (423)
T ss_pred cccccceeEEEecCCCCeEEee---cccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeE
Confidence 4999999999999999999999 89999999993210 1123566778999999999
Q ss_pred EEecCCCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-------------------
Q psy7433 62 VFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------- 122 (213)
Q Consensus 62 ~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------- 122 (213)
.|++ ...+++++.|-+|+.||+.++.....+. ....+.++..+|..++|++|+.|..++
T Consensus 267 ~w~d-~~v~yS~SwDHTIk~WDletg~~~~~~~-~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH 344 (423)
T KOG0313|consen 267 VWSD-ATVIYSVSWDHTIKVWDLETGGLKSTLT-TNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGH 344 (423)
T ss_pred EEcC-CCceEeecccceEEEEEeecccceeeee-cCcceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecc
Confidence 9998 6689999999999999999998877766 467789999999999999999999887
Q ss_pred -eceEEEEEccCCc-eEEEecCCCcEEEEEccCCe-eeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEE
Q psy7433 123 -SPVKCLAIDPHEE-FFVTGAGDGDIKVWSLSGNH-LLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKV 199 (213)
Q Consensus 123 -~~v~~~~~~~~~~-~l~~~~~dg~i~v~d~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~i 199 (213)
..|.++.|+|... .|++|+.|+++++||+|+.. +++.+.+|. ..|.++.|.....+++|+.|+++++
T Consensus 345 ~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~----------DKvl~vdW~~~~~IvSGGaD~~l~i 414 (423)
T KOG0313|consen 345 KNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHN----------DKVLSVDWNEGGLIVSGGADNKLRI 414 (423)
T ss_pred hhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeeccCC----------ceEEEEeccCCceEEeccCcceEEE
Confidence 7889999999766 78899999999999999887 999999986 7899999999889999999999999
Q ss_pred EeCCC
Q psy7433 200 RQLPD 204 (213)
Q Consensus 200 w~~~~ 204 (213)
+.-..
T Consensus 415 ~~~~~ 419 (423)
T KOG0313|consen 415 FKGSP 419 (423)
T ss_pred ecccc
Confidence 97653
|
|
| >KOG0306|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.6e-28 Score=184.63 Aligned_cols=194 Identities=21% Similarity=0.295 Sum_probs=171.5
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCc----ccccc-e-----eeeeeecCCceEEEEecCCCEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLP----QKKAL-V-----QAFVCHDQGASSLVFAPQHQLLI 71 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~----~~~~~-~-----~~~~~~~~~v~~~~~~~~~~~l~ 71 (213)
+.++|.+.|++++.+||+..++++ +.|.+|++||+... .+.+. + +++ .-...|.|+.+|||+++|+
T Consensus 449 ti~AHdgaIWsi~~~pD~~g~vT~---saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtL-el~ddvL~v~~Spdgk~La 524 (888)
T KOG0306|consen 449 TIRAHDGAIWSISLSPDNKGFVTG---SADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTL-ELEDDVLCVSVSPDGKLLA 524 (888)
T ss_pred hhhccccceeeeeecCCCCceEEe---cCCcEEEEEeEEEEeccCcccceeeeeccceEE-eccccEEEEEEcCCCcEEE
Confidence 467999999999999999999999 79999999997311 11111 1 112 2356799999999999999
Q ss_pred EEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCC
Q psy7433 72 SAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHE 134 (213)
Q Consensus 72 ~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~ 134 (213)
.+--|.+|++|-+++.+....+-+|.-||.|+..+||++.+++|+.|..++ ..|+++.|-|..
T Consensus 525 VsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fAHdDSvm~V~F~P~~ 604 (888)
T KOG0306|consen 525 VSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFAHDDSVMSVQFLPKT 604 (888)
T ss_pred EEeccCeEEEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhcccCceeEEEEcccc
Confidence 999999999999999999889999999999999999999999999999998 789999999999
Q ss_pred ceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCcccc
Q psy7433 135 EFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDAVV 209 (213)
Q Consensus 135 ~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~~ 209 (213)
.++.+++.|+.|+-||-.+.+.+..+.+|+ ..|.+++..|++ ++++++.|.+|++|+......++
T Consensus 605 ~~FFt~gKD~kvKqWDg~kFe~iq~L~~H~----------~ev~cLav~~~G~~vvs~shD~sIRlwE~tde~~~l 670 (888)
T KOG0306|consen 605 HLFFTCGKDGKVKQWDGEKFEEIQKLDGHH----------SEVWCLAVSPNGSFVVSSSHDKSIRLWERTDEILIL 670 (888)
T ss_pred eeEEEecCcceEEeechhhhhhheeeccch----------heeeeeEEcCCCCeEEeccCCceeEeeeccCcceee
Confidence 999999999999999999999999999998 789999999965 79999999999999988754443
|
|
| >KOG1407|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.3e-28 Score=164.76 Aligned_cols=192 Identities=19% Similarity=0.306 Sum_probs=163.1
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec-CCCEEEEEcCCCcEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP-QHQLLISAGKKGDIC 80 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~ 80 (213)
.+++|.+.|.+++|+-+|..|+++ +.|+++.+|+++.. ....-....+|.+.|-.++|+| +...+++++.|..|+
T Consensus 15 ~~~~~~~~v~Sv~wn~~g~~lasg---s~dktv~v~n~e~~-r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir 90 (313)
T KOG1407|consen 15 ELQGHVQKVHSVAWNCDGTKLASG---SFDKTVSVWNLERD-RFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIR 90 (313)
T ss_pred HhhhhhhcceEEEEcccCceeeec---ccCCceEEEEecch-hhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEE
Confidence 467899999999999999999999 89999999999532 2222234567888999999998 667999999999999
Q ss_pred EEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee--------------------------------------
Q psy7433 81 VIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-------------------------------------- 122 (213)
Q Consensus 81 iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-------------------------------------- 122 (213)
+||++++++...+...... .-+.|+|++.++++++.|..+.
T Consensus 91 ~wd~r~~k~~~~i~~~~en-i~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd~Fflt~GlG 169 (313)
T KOG1407|consen 91 IWDIRSGKCTARIETKGEN-INITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNSNDLFFLTNGLG 169 (313)
T ss_pred EEEeccCcEEEEeeccCcc-eEEEEcCCCCEEEEecCcccEEEEEecccceeehhcccceeeeeeecCCCCEEEEecCCc
Confidence 9999999999888754444 4688999999999999988764
Q ss_pred --------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEe
Q psy7433 123 --------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHV 182 (213)
Q Consensus 123 --------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 182 (213)
....|+.|+|+|+++++|+.|..+.+||+...-++..+..+. -+|..+.|
T Consensus 170 ~v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRld----------wpVRTlSF 239 (313)
T KOG1407|consen 170 CVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISRLD----------WPVRTLSF 239 (313)
T ss_pred eEEEEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheeecccc----------CceEEEEe
Confidence 567889999999999999999999999999888888887776 58999999
Q ss_pred CCCC-eEEEEecCCcEEEEeCCCCccc
Q psy7433 183 DGGS-RLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 183 ~~~~-~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
+.++ +||+++.|..|-|=++.++..+
T Consensus 240 S~dg~~lASaSEDh~IDIA~vetGd~~ 266 (313)
T KOG1407|consen 240 SHDGRMLASASEDHFIDIAEVETGDRV 266 (313)
T ss_pred ccCcceeeccCccceEEeEecccCCeE
Confidence 9765 5899999999988888877654
|
|
| >KOG0277|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.4e-29 Score=167.89 Aligned_cols=185 Identities=19% Similarity=0.285 Sum_probs=158.5
Q ss_pred ccccccCceEEEEEeC-CCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec-CCCEEEEEcCCCcE
Q psy7433 2 TYQCHNKITSDFVFLG-SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP-QHQLLISAGKKGDI 79 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~-~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v 79 (213)
.++.|...|.++.|++ +++.++++ |.|++|++|+. ..++.+.++.+|+..|...+|+| ..+.+++++.|+.+
T Consensus 99 ~~kEH~~EV~Svdwn~~~r~~~lts---SWD~TiKLW~~---~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l 172 (311)
T KOG0277|consen 99 KFKEHKREVYSVDWNTVRRRIFLTS---SWDGTIKLWDP---NRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTL 172 (311)
T ss_pred HHHhhhhheEEeccccccceeEEee---ccCCceEeecC---CCCcceEeecCCccEEEEEecCCCCCCeEEEccCCceE
Confidence 5789999999999999 55667777 89999999998 56778888999999999999999 67899999999999
Q ss_pred EEEeccCceEEEecccCCCCeeEEEecC-CCCEEEEecCCCcee------------------eceEEEEEccCCc-eEEE
Q psy7433 80 CVIDLRQRVIRSRFNAHESPVKCLAIDP-HEEFFVTGAGDGDIK------------------SPVKCLAIDPHEE-FFVT 139 (213)
Q Consensus 80 ~iwd~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~i~------------------~~v~~~~~~~~~~-~l~~ 139 (213)
++||++.......+..|...+.++.|+. +.+.+++++.|+.++ ..|..++|||... +|++
T Consensus 173 ~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaS 252 (311)
T KOG0277|consen 173 RLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLAS 252 (311)
T ss_pred EEEEecCCCceeEEEeccceeEeecccccCCcEEEecCCCceEEEEehhhccccceeecCCceEEEEEecCcchhhHhhh
Confidence 9999987544445888999999999998 667899999999987 6789999999754 8999
Q ss_pred ecCCCcEEEEEccCC-eeeeeecCCCCceeEEEecCCCeEEEEeCC--CCeEEEEecCCcEEEEeC
Q psy7433 140 GAGDGDIKVWSLSGN-HLLYNFPGEHARSSFFKHIGQGVTQLHVDG--GSRLFSCGADGSMKVRQL 202 (213)
Q Consensus 140 ~~~dg~i~v~d~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~l~s~~~d~~i~iw~~ 202 (213)
++.|-++++||...+ ..+.+...|. .-+..+.|++ .+++|+++-|+.++||+-
T Consensus 253 asYDmT~riw~~~~~ds~~e~~~~Ht----------EFv~g~Dws~~~~~~vAs~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 253 ASYDMTVRIWDPERQDSAIETVDHHT----------EFVCGLDWSLFDPGQVASTGWDELLYVWNP 308 (311)
T ss_pred ccccceEEecccccchhhhhhhhccc----------eEEeccccccccCceeeecccccceeeecc
Confidence 999999999999744 3444554444 5688899987 568999999999999983
|
|
| >KOG0643|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-27 Score=162.50 Aligned_cols=189 Identities=12% Similarity=0.160 Sum_probs=167.3
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
.|+||.++++.+.++.+|.+|.++ +.|.+..+|-. ..++.+.++.+|.+.|.++..+.+.+.+++|+.|.++++
T Consensus 5 ~l~GHERplTqiKyN~eGDLlFsc---aKD~~~~vw~s---~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kL 78 (327)
T KOG0643|consen 5 LLQGHERPLTQIKYNREGDLLFSC---AKDSTPTVWYS---LNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKL 78 (327)
T ss_pred ccccCccccceEEecCCCcEEEEe---cCCCCceEEEe---cCCceeeeecCCCceEEEEEecCCcceeeeccccceeEE
Confidence 478999999999999999999999 79999999986 578899999999999999999999999999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------------------eceEEEEEcc
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------------------SPVKCLAIDP 132 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------------------~~v~~~~~~~ 132 (213)
||+++|+.+..++ ...+|..+.|++++++++.+..+..-. ..++.+-|.|
T Consensus 79 WDv~tGk~la~~k-~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~ 157 (327)
T KOG0643|consen 79 WDVETGKQLATWK-TNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGP 157 (327)
T ss_pred EEcCCCcEEEEee-cCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecc
Confidence 9999999998887 678899999999999887776553211 6788999999
Q ss_pred CCceEEEecCCCcEEEEEccCCee-eeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCcc
Q psy7433 133 HEEFFVTGAGDGDIKVWSLSGNHL-LYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 133 ~~~~l~~~~~dg~i~v~d~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~ 207 (213)
-+++|++|.+||.|..||+++++. +...+.|. ..|+.+.++++. ++++++.|.+-++||+.+-..
T Consensus 158 l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~----------~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v 224 (327)
T KOG0643|consen 158 LGETIIAGHEDGSISIYDARTGKELVDSDEEHS----------SKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEV 224 (327)
T ss_pred cCCEEEEecCCCcEEEEEcccCceeeechhhhc----------cccccccccCCcceEEecccCccceeeeccceee
Confidence 999999999999999999999754 44445554 689999999975 599999999999999987643
|
|
| >KOG0275|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=5e-29 Score=174.60 Aligned_cols=189 Identities=16% Similarity=0.269 Sum_probs=162.3
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCccccc-----ceeeeeeecCCceEEEEecCCCEEEEEcCCCcE
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKA-----LVQAFVCHDQGASSLVFAPQHQLLISAGKKGDI 79 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v 79 (213)
+.+..+-|..|+|||++|+++ +.||.|.+|+..+++-.+ -...+--+..+|.|+.|+.|...+++|+.||.|
T Consensus 211 g~KSh~EcA~FSPDgqyLvsg---SvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkI 287 (508)
T KOG0275|consen 211 GQKSHVECARFSPDGQYLVSG---SVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKI 287 (508)
T ss_pred ccccchhheeeCCCCceEeec---cccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcE
Confidence 345678899999999999999 899999999984332211 122344577899999999999999999999999
Q ss_pred EEEeccCceEEEecc-cCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEec
Q psy7433 80 CVIDLRQRVIRSRFN-AHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGA 141 (213)
Q Consensus 80 ~iwd~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~ 141 (213)
++|.+++|.+++.|. .|...|+|+.|+.|+..+++++.|..++ +-|+...|.++|..+++++
T Consensus 288 KvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaS 367 (508)
T KOG0275|consen 288 KVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISAS 367 (508)
T ss_pred EEEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEec
Confidence 999999999999996 7999999999999999999999999887 7789999999999999999
Q ss_pred CCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCC--CeEEEEecCCcEEEEeCCC
Q psy7433 142 GDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG--SRLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 142 ~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~l~s~~~d~~i~iw~~~~ 204 (213)
.||+|++|+.++.+++.++...... .+|+++-.-|. ..++.+...+++++.++..
T Consensus 368 sDgtvkvW~~KtteC~~Tfk~~~~d--------~~vnsv~~~PKnpeh~iVCNrsntv~imn~qG 424 (508)
T KOG0275|consen 368 SDGTVKVWHGKTTECLSTFKPLGTD--------YPVNSVILLPKNPEHFIVCNRSNTVYIMNMQG 424 (508)
T ss_pred CCccEEEecCcchhhhhhccCCCCc--------ccceeEEEcCCCCceEEEEcCCCeEEEEeccc
Confidence 9999999999999999998765432 57888888773 4688888888999988864
|
|
| >KOG0319|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.4e-28 Score=183.41 Aligned_cols=190 Identities=19% Similarity=0.284 Sum_probs=167.3
Q ss_pred cccccCceEEEEEeCCC-CeEEEeeccCCCccEEEEeCCCccccccee------eeeeecCCceEEEEecCCCEEEEEcC
Q psy7433 3 YQCHNKITSDFVFLGSC-SLVATAGHSSESKNVCLWDSLLPQKKALVQ------AFVCHDQGASSLVFAPQHQLLISAGK 75 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~-~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~------~~~~~~~~v~~~~~~~~~~~l~~~~~ 75 (213)
..+|++.|.+++++..+ .+|+++ +.|.++++|++...+...... ....|...|++++.+|+.+++++|+.
T Consensus 407 ~~gH~~svgava~~~~~asffvsv---S~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~Sq 483 (775)
T KOG0319|consen 407 ANGHTNSVGAVAGSKLGASFFVSV---SQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQ 483 (775)
T ss_pred hcccccccceeeecccCccEEEEe---cCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEeccc
Confidence 46899999999998754 477887 899999999995421221111 23468999999999999999999999
Q ss_pred CCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEE
Q psy7433 76 KGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFV 138 (213)
Q Consensus 76 d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~ 138 (213)
|++.++|++++......+.+|...++++.|+|..+.+++++.|.+++ ..|..+.|-.+++.|+
T Consensus 484 DktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~~~~qli 563 (775)
T KOG0319|consen 484 DKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIRNGKQLI 563 (775)
T ss_pred ccceeeecccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecCccceeEeeeeeeCCcEEE
Confidence 99999999999999999999999999999999999999999999998 6788899999999999
Q ss_pred EecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCC-CeEEEEecCCcEEEEeCCCC
Q psy7433 139 TGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG-SRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 139 ~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~d~~i~iw~~~~~ 205 (213)
+++.||-|++|++++.+++.++..|. ..|.+++.+|. ..++||+.||.|.+|.=.+.
T Consensus 564 S~~adGliKlWnikt~eC~~tlD~H~----------DrvWaL~~~~~~~~~~tgg~Dg~i~~wkD~Te 621 (775)
T KOG0319|consen 564 SAGADGLIKLWNIKTNECEMTLDAHN----------DRVWALSVSPLLDMFVTGGGDGRIIFWKDVTE 621 (775)
T ss_pred eccCCCcEEEEeccchhhhhhhhhcc----------ceeEEEeecCccceeEecCCCeEEEEeecCcH
Confidence 99999999999999999999999998 78999999984 56899999999999965443
|
|
| >KOG0973|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=8e-28 Score=189.81 Aligned_cols=192 Identities=19% Similarity=0.388 Sum_probs=167.9
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCC---------------cccccceeeeeeecCCceEEEEecC
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLL---------------PQKKALVQAFVCHDQGASSLVFAPQ 66 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~---------------~~~~~~~~~~~~~~~~v~~~~~~~~ 66 (213)
++..|.+.|+|+.|+|||++||+| +.|+.|.||+... -+..++...+.+|...|..++|+|+
T Consensus 64 ~m~~h~~sv~CVR~S~dG~~lAsG---SDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~ 140 (942)
T KOG0973|consen 64 TMDDHDGSVNCVRFSPDGSYLASG---SDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPD 140 (942)
T ss_pred eeccccCceeEEEECCCCCeEeec---cCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCC
Confidence 356799999999999999999999 8999999998751 0223467778899999999999999
Q ss_pred CCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee------------------------
Q psy7433 67 HQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------------ 122 (213)
Q Consensus 67 ~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------------ 122 (213)
+.+|++++.|+.|.+||.++.+.+..+.+|.+.|..+.|.|-|++|++-+.|++++
T Consensus 141 ~~~lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T 220 (942)
T KOG0973|consen 141 DSLLVSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTT 220 (942)
T ss_pred ccEEEEecccceEEEEccccceeeeeeecccccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCcc
Confidence 99999999999999999999999999999999999999999999999999999986
Q ss_pred ---------------------------------------------eceEEEEEccC-----Cc------------eEEEe
Q psy7433 123 ---------------------------------------------SPVKCLAIDPH-----EE------------FFVTG 140 (213)
Q Consensus 123 ---------------------------------------------~~v~~~~~~~~-----~~------------~l~~~ 140 (213)
.++.++.|+|. .+ .+|+|
T Consensus 221 ~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~Avg 300 (942)
T KOG0973|consen 221 FFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVG 300 (942)
T ss_pred eeeecccCCCcCeecchhhccCCcceeEEEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEe
Confidence 78899999982 11 57899
Q ss_pred cCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEecCCcEEEEeCCCC
Q psy7433 141 AGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 141 ~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~d~~i~iw~~~~~ 205 (213)
+.|+.|.||.....+++.....-. ...|..++|+|+++ |++++.||+|.+..+.+.
T Consensus 301 SqDrSlSVW~T~~~RPl~vi~~lf---------~~SI~DmsWspdG~~LfacS~DGtV~~i~Fee~ 357 (942)
T KOG0973|consen 301 SQDRSLSVWNTALPRPLFVIHNLF---------NKSIVDMSWSPDGFSLFACSLDGTVALIHFEEK 357 (942)
T ss_pred cCCccEEEEecCCCCchhhhhhhh---------cCceeeeeEcCCCCeEEEEecCCeEEEEEcchH
Confidence 999999999997777766554322 26899999999886 999999999999998765
|
|
| >KOG0318|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.8e-27 Score=174.36 Aligned_cols=193 Identities=16% Similarity=0.271 Sum_probs=161.9
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCC----C
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKK----G 77 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~ 77 (213)
.+.+|..+++-..++|.|.++|++ ...|.|+|||... .+.-....++.-.++|..+.|++++++|++.++. |
T Consensus 54 iYtEH~~~vtVAkySPsG~yiASG---D~sG~vRIWdtt~-~~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGEGrerfg 129 (603)
T KOG0318|consen 54 IYTEHAHQVTVAKYSPSGFYIASG---DVSGKVRIWDTTQ-KEHILKNEFQVLAGPIKDISWDFDSKRIAAVGEGRERFG 129 (603)
T ss_pred eeccccceeEEEEeCCCceEEeec---CCcCcEEEEeccC-cceeeeeeeeecccccccceeCCCCcEEEEEecCcccee
Confidence 356899999999999999999999 8999999999842 1222334566677899999999999998887643 3
Q ss_pred cEEEEeccCceEEEecccCCCCeeEEEecCCCC-EEEEecCCCcee-----------------eceEEEEEccCCceEEE
Q psy7433 78 DICVIDLRQRVIRSRFNAHESPVKCLAIDPHEE-FFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVT 139 (213)
Q Consensus 78 ~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~ 139 (213)
.+.+| ++|..+..+.+|...+.++.|-|.-. ++++|++|+.+. .-|.|+.|+|||.++++
T Consensus 130 ~~F~~--DSG~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat 207 (603)
T KOG0318|consen 130 HVFLW--DSGNSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFAT 207 (603)
T ss_pred EEEEe--cCCCccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEE
Confidence 35555 46777888999999999999999654 699999999885 67999999999999999
Q ss_pred ecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCcc
Q psy7433 140 GAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 140 ~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~ 207 (213)
++.||.+.+||=++++.+..+.... .|.+.|.+++|+||+ ++++++.|.+++|||+.+.+.
T Consensus 208 ~gsDgki~iyDGktge~vg~l~~~~-------aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~sl 269 (603)
T KOG0318|consen 208 AGSDGKIYIYDGKTGEKVGELEDSD-------AHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSL 269 (603)
T ss_pred ecCCccEEEEcCCCccEEEEecCCC-------CccccEEEEEECCCCceEEEecCCceEEEEEeeccce
Confidence 9999999999999999999998321 123899999999975 699999999999999998843
|
|
| >KOG0294|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.1e-27 Score=164.38 Aligned_cols=186 Identities=18% Similarity=0.309 Sum_probs=154.6
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCC--EEEEEcCCCcE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQ--LLISAGKKGDI 79 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~v 79 (213)
.+++|.++|++++. +++++|+| +.|.+|+|||+ .+...+..+-.|.+.|+++.|.+.-. .|++|+.||.|
T Consensus 38 ~~~aH~~sitavAV--s~~~~aSG---ssDetI~IYDm---~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i 109 (362)
T KOG0294|consen 38 AFSAHAGSITALAV--SGPYVASG---SSDETIHIYDM---RKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHI 109 (362)
T ss_pred cccccccceeEEEe--cceeEecc---CCCCcEEEEec---cchhhhcceeccccceEEEEecCCcchhheeeecCCCcE
Confidence 57899999999998 58899999 79999999999 56777788888999999999998654 89999999999
Q ss_pred EEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-------------------------------------
Q psy7433 80 CVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------------------------- 122 (213)
Q Consensus 80 ~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------------------------- 122 (213)
.+|+....+.+..+++|...|+.++.+|.++.-++.+.|+.++
T Consensus 110 ~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~~~at~v~w~~~Gd~F~v~~~~ 189 (362)
T KOG0294|consen 110 IIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLKNKATLVSWSPQGDHFVVSGRN 189 (362)
T ss_pred EEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeeccCCcceeeEEcCCCCEEEEEecc
Confidence 9999999999999999999999999999999999999999886
Q ss_pred -----------------e--ceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeC
Q psy7433 123 -----------------S--PVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVD 183 (213)
Q Consensus 123 -----------------~--~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 183 (213)
. .+.|+.|-. +.+|++|..|+.|.+||.....+...+.+|. ..|..+.+-
T Consensus 190 ~i~i~q~d~A~v~~~i~~~~r~l~~~~l~-~~~L~vG~d~~~i~~~D~ds~~~~~~~~AH~----------~RVK~i~~~ 258 (362)
T KOG0294|consen 190 KIDIYQLDNASVFREIENPKRILCATFLD-GSELLVGGDNEWISLKDTDSDTPLTEFLAHE----------NRVKDIASY 258 (362)
T ss_pred EEEEEecccHhHhhhhhccccceeeeecC-CceEEEecCCceEEEeccCCCccceeeecch----------hheeeeEEE
Confidence 1 133333332 3457777777777777777777777777776 678888853
Q ss_pred --CC-CeEEEEecCCcEEEEeCCCCc
Q psy7433 184 --GG-SRLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 184 --~~-~~l~s~~~d~~i~iw~~~~~~ 206 (213)
|. .+|+|++.||.|++||++...
T Consensus 259 ~~~~~~~lvTaSSDG~I~vWd~~~~~ 284 (362)
T KOG0294|consen 259 TNPEHEYLVTASSDGFIKVWDIDMET 284 (362)
T ss_pred ecCCceEEEEeccCceEEEEEccccc
Confidence 33 469999999999999998763
|
|
| >KOG0643|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.4e-27 Score=159.97 Aligned_cols=197 Identities=17% Similarity=0.245 Sum_probs=166.9
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEc-----CC
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG-----KK 76 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-----~d 76 (213)
+++||++.|+|++.+-+.+.++++ +.|.++++||+ ++++++..++ .+.+|..+.|+++|++++.+. ..
T Consensus 47 ty~GHtGavW~~Did~~s~~liTG---SAD~t~kLWDv---~tGk~la~~k-~~~~Vk~~~F~~~gn~~l~~tD~~mg~~ 119 (327)
T KOG0643|consen 47 TYDGHTGAVWCCDIDWDSKHLITG---SADQTAKLWDV---ETGKQLATWK-TNSPVKRVDFSFGGNLILASTDKQMGYT 119 (327)
T ss_pred eecCCCceEEEEEecCCcceeeec---cccceeEEEEc---CCCcEEEEee-cCCeeEEEeeccCCcEEEEEehhhcCcc
Confidence 678999999999999999999999 89999999999 6788887776 467899999999999887764 45
Q ss_pred CcEEEEecc-------CceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee------------------eceEEEEEc
Q psy7433 77 GDICVIDLR-------QRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------SPVKCLAID 131 (213)
Q Consensus 77 ~~v~iwd~~-------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------~~v~~~~~~ 131 (213)
+.|.++|++ ..++...+..+.+.++.+-|.|-++.+++|.++|.|. ..|+.|.++
T Consensus 120 ~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s 199 (327)
T KOG0643|consen 120 CFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFS 199 (327)
T ss_pred eEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEEEEecCCCcEEEEEcccCceeeechhhhcccccccccc
Confidence 789999998 3466778888889999999999999999999999886 789999999
Q ss_pred cCCceEEEecCCCcEEEEEccCCeeeeeecCCCCc---------------------------------------------
Q psy7433 132 PHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHAR--------------------------------------------- 166 (213)
Q Consensus 132 ~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~--------------------------------------------- 166 (213)
|+..++++++.|.+-++||+++-+.+.++....+.
T Consensus 200 ~d~T~FiT~s~Dttakl~D~~tl~v~Kty~te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEE 279 (327)
T KOG0643|consen 200 RDRTYFITGSKDTTAKLVDVRTLEVLKTYTTERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEE 279 (327)
T ss_pred CCcceEEecccCccceeeeccceeeEEEeeecccccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHH
Confidence 99999999999999999999887766655432111
Q ss_pred eeEEEecCCCeEEEEeCCCCe-EEEEecCCcEEEEeCCCC
Q psy7433 167 SSFFKHIGQGVTQLHVDGGSR-LFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 167 ~~~~~~~~~~v~~~~~~~~~~-l~s~~~d~~i~iw~~~~~ 205 (213)
....+.|-++|++++++|++. +++|+.||.||+..+...
T Consensus 280 igrvkGHFGPINsvAfhPdGksYsSGGEDG~VR~h~Fd~~ 319 (327)
T KOG0643|consen 280 IGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRLHHFDSN 319 (327)
T ss_pred hccccccccCcceeEECCCCcccccCCCCceEEEEEeccc
Confidence 011234668999999999876 899999999999877654
|
|
| >KOG0285|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=169.38 Aligned_cols=153 Identities=18% Similarity=0.359 Sum_probs=144.3
Q ss_pred cceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee---
Q psy7433 46 ALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK--- 122 (213)
Q Consensus 46 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~--- 122 (213)
+..+.+++|.+.|.++++.|.+..+++|+.|++++|||+.+++....+.+|...+..+++++...++.++++|+.++
T Consensus 142 Kl~rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwD 221 (460)
T KOG0285|consen 142 KLYRVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWD 221 (460)
T ss_pred eehhhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEEEe
Confidence 45566778999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred --------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCC-CCe
Q psy7433 123 --------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG-GSR 187 (213)
Q Consensus 123 --------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~ 187 (213)
+.|.|++.+|.-..|++|+.|.+++|||+|+...+..+.+|. .+|..+.+.| +.+
T Consensus 222 Le~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~----------~~V~~V~~~~~dpq 291 (460)
T KOG0285|consen 222 LEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHT----------NPVASVMCQPTDPQ 291 (460)
T ss_pred chhhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCC----------CcceeEEeecCCCc
Confidence 899999999999999999999999999999999999999997 7899999987 779
Q ss_pred EEEEecCCcEEEEeCCCCccc
Q psy7433 188 LFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 188 l~s~~~d~~i~iw~~~~~~~~ 208 (213)
+++++.|++|++||+..++..
T Consensus 292 vit~S~D~tvrlWDl~agkt~ 312 (460)
T KOG0285|consen 292 VITGSHDSTVRLWDLRAGKTM 312 (460)
T ss_pred eEEecCCceEEEeeeccCcee
Confidence 999999999999999988654
|
|
| >KOG0283|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-27 Score=183.33 Aligned_cols=187 Identities=15% Similarity=0.272 Sum_probs=159.5
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec-CCCEEEEEcCCCcEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP-QHQLLISAGKKGDIC 80 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~ 80 (213)
.|.||.+.|.++.|+.++ +|+++ +-|.+|+||++ ....+++.|. |+..|+|++|+| |.+++++|+-|+.|+
T Consensus 364 ef~GHt~DILDlSWSKn~-fLLSS---SMDKTVRLWh~---~~~~CL~~F~-HndfVTcVaFnPvDDryFiSGSLD~KvR 435 (712)
T KOG0283|consen 364 EFKGHTADILDLSWSKNN-FLLSS---SMDKTVRLWHP---GRKECLKVFS-HNDFVTCVAFNPVDDRYFISGSLDGKVR 435 (712)
T ss_pred hhhccchhheecccccCC-eeEec---cccccEEeecC---CCcceeeEEe-cCCeeEEEEecccCCCcEeecccccceE
Confidence 578999999999999765 66677 69999999998 6788888886 999999999999 889999999999999
Q ss_pred EEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-------------------------eceEEEEEccCCc
Q psy7433 81 VIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-------------------------SPVKCLAIDPHEE 135 (213)
Q Consensus 81 iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-------------------------~~v~~~~~~~~~~ 135 (213)
||++...+.+.-.. ....|++++|.|+|+..++|+.+|.++ ..|+.+.|.|...
T Consensus 436 iWsI~d~~Vv~W~D-l~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~ 514 (712)
T KOG0283|consen 436 LWSISDKKVVDWND-LRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPGDP 514 (712)
T ss_pred EeecCcCeeEeehh-hhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEecCCCC
Confidence 99998877665544 458899999999999999999999886 5699999998644
Q ss_pred -eEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCC-CeEEEEecCCcEEEEeCCCC
Q psy7433 136 -FFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG-SRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 136 -~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~d~~i~iw~~~~~ 205 (213)
.+++.+.|..|+|||.++...+..+++.... ..-....|+.+ .+|++++.|..|++|++...
T Consensus 515 ~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~--------~SQ~~Asfs~Dgk~IVs~seDs~VYiW~~~~~ 578 (712)
T KOG0283|consen 515 DEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNT--------SSQISASFSSDGKHIVSASEDSWVYIWKNDSF 578 (712)
T ss_pred CeEEEecCCCceEEEeccchhhhhhhcccccC--------CcceeeeEccCCCEEEEeecCceEEEEeCCCC
Confidence 5888889999999999999999999887643 33455666665 46999999999999998543
|
|
| >KOG0647|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-27 Score=163.42 Aligned_cols=199 Identities=20% Similarity=0.265 Sum_probs=151.5
Q ss_pred ccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEecc
Q psy7433 6 HNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLR 85 (213)
Q Consensus 6 h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~ 85 (213)
....|.+++|||....++++| |.|++||+|+++..... .-+....|.++|.+++|+.+|..+++|+.|+.+++||+.
T Consensus 26 P~DsIS~l~FSP~~~~~~~A~--SWD~tVR~wevq~~g~~-~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~ 102 (347)
T KOG0647|consen 26 PEDSISALAFSPQADNLLAAG--SWDGTVRIWEVQNSGQL-VPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLA 102 (347)
T ss_pred cccchheeEeccccCceEEec--ccCCceEEEEEecCCcc-cchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEcc
Confidence 457899999999555554343 89999999999642111 224556789999999999999999999999999999999
Q ss_pred CceEEEecccCCCCeeEEEecCCCC--EEEEecCCCcee-----------------------------------------
Q psy7433 86 QRVIRSRFNAHESPVKCLAIDPHEE--FFVTGAGDGDIK----------------------------------------- 122 (213)
Q Consensus 86 ~~~~~~~~~~~~~~i~~~~~~~~~~--~l~~~~~~~~i~----------------------------------------- 122 (213)
+++ +..+..|..+|..+.|-+... .|++|+.|++++
T Consensus 103 S~Q-~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeRvYa~Dv~~pm~vVata~r~i~vy 181 (347)
T KOG0647|consen 103 SGQ-VSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPERVYAADVLYPMAVVATAERHIAVY 181 (347)
T ss_pred CCC-eeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccceeeehhccCceeEEEecCCcEEEE
Confidence 995 456677999999999987555 899999999997
Q ss_pred -----------------eceEEEEEccCCceEEEecCCCcEEEEEccCC--eeeeeecCCCCceeEEEecCCCeEEEEeC
Q psy7433 123 -----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGN--HLLYNFPGEHARSSFFKHIGQGVTQLHVD 183 (213)
Q Consensus 123 -----------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 183 (213)
..++|++..++....+.|+-+|.+.+..+..+ +.-++++.|..... ....-..|++++|+
T Consensus 182 nL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~-~~~~VYaVNsi~Fh 260 (347)
T KOG0647|consen 182 NLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNS-VNDDVYAVNSIAFH 260 (347)
T ss_pred EcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCC-CCCceEEecceEee
Confidence 55677777777766677777777777766544 44455555543211 00012468899999
Q ss_pred C-CCeEEEEecCCcEEEEeCCCCcccc
Q psy7433 184 G-GSRLFSCGADGSMKVRQLPDRDAVV 209 (213)
Q Consensus 184 ~-~~~l~s~~~d~~i~iw~~~~~~~~~ 209 (213)
| .+.|+|++.||.+.+||-....++.
T Consensus 261 P~hgtlvTaGsDGtf~FWDkdar~kLk 287 (347)
T KOG0647|consen 261 PVHGTLVTAGSDGTFSFWDKDARTKLK 287 (347)
T ss_pred cccceEEEecCCceEEEecchhhhhhh
Confidence 9 5789999999999999987665553
|
|
| >KOG0281|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.9e-28 Score=170.11 Aligned_cols=176 Identities=18% Similarity=0.336 Sum_probs=156.1
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccC
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQ 86 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~ 86 (213)
.+.|+|+.+ |...+++| ..|.+|+|||. ....+.+.+.+|.+.|.|+.|. .+.+++|+.|.+|++||+.+
T Consensus 197 skgVYClQY--DD~kiVSG---lrDnTikiWD~---n~~~c~~~L~GHtGSVLCLqyd--~rviisGSSDsTvrvWDv~t 266 (499)
T KOG0281|consen 197 SKGVYCLQY--DDEKIVSG---LRDNTIKIWDK---NSLECLKILTGHTGSVLCLQYD--ERVIVSGSSDSTVRVWDVNT 266 (499)
T ss_pred CCceEEEEe--cchhhhcc---cccCceEEecc---ccHHHHHhhhcCCCcEEeeecc--ceEEEecCCCceEEEEeccC
Confidence 456888876 56788888 89999999998 6788899999999999999985 55999999999999999999
Q ss_pred ceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee--------------------eceEEEEEccCCceEEEecCCCcE
Q psy7433 87 RVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK--------------------SPVKCLAIDPHEEFFVTGAGDGDI 146 (213)
Q Consensus 87 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~--------------------~~v~~~~~~~~~~~l~~~~~dg~i 146 (213)
++++..+-.|-..|..+.|+ +.++++++.|..+. ..|+.+.|+ .+++++++.|.+|
T Consensus 267 ge~l~tlihHceaVLhlrf~--ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd--~kyIVsASgDRTi 342 (499)
T KOG0281|consen 267 GEPLNTLIHHCEAVLHLRFS--NGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTI 342 (499)
T ss_pred CchhhHHhhhcceeEEEEEe--CCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc--cceEEEecCCceE
Confidence 99999999999999999998 56899999999886 778888887 4699999999999
Q ss_pred EEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCcc
Q psy7433 147 KVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 147 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~ 207 (213)
++|++.+++.+.++.+|. ..|-|+.+. +..+++|+.|.+|++||+..+..
T Consensus 343 kvW~~st~efvRtl~gHk----------RGIAClQYr-~rlvVSGSSDntIRlwdi~~G~c 392 (499)
T KOG0281|consen 343 KVWSTSTCEFVRTLNGHK----------RGIACLQYR-DRLVVSGSSDNTIRLWDIECGAC 392 (499)
T ss_pred EEEeccceeeehhhhccc----------ccceehhcc-CeEEEecCCCceEEEEeccccHH
Confidence 999999999999999987 578777664 45689999999999999998854
|
|
| >KOG0265|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.4e-27 Score=161.47 Aligned_cols=186 Identities=18% Similarity=0.334 Sum_probs=151.2
Q ss_pred CccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCc----------------------
Q psy7433 1 MTYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGA---------------------- 58 (213)
Q Consensus 1 ~~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v---------------------- 58 (213)
+++++|.+.|..+.|.++++.++++ +.|.+|+.||+ +++++++.+++|..-|
T Consensus 84 ~~lkgHsgAVM~l~~~~d~s~i~S~---gtDk~v~~wD~---~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~ 157 (338)
T KOG0265|consen 84 WVLKGHSGAVMELHGMRDGSHILSC---GTDKTVRGWDA---ETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTL 157 (338)
T ss_pred eeeccccceeEeeeeccCCCEEEEe---cCCceEEEEec---ccceeeehhccccceeeecCccccCCeEEEecCCCceE
Confidence 4788999999999999999999999 68999999998 5555655555555444
Q ss_pred --------------------eEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCC
Q psy7433 59 --------------------SSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGD 118 (213)
Q Consensus 59 --------------------~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~ 118 (213)
+++.|..++..+++|+-|+.|++||++.+.....+.+|.++|+.+..+|+|..+++-+.|
T Consensus 158 kl~D~R~k~~~~t~~~kyqltAv~f~d~s~qv~sggIdn~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd 237 (338)
T KOG0265|consen 158 KLWDIRKKEAIKTFENKYQLTAVGFKDTSDQVISGGIDNDIKVWDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMD 237 (338)
T ss_pred EEEeecccchhhccccceeEEEEEecccccceeeccccCceeeeccccCcceEEeecccCceeeEEeccCCCcccccccc
Confidence 444454444455555555555555555555566778899999999999999999999999
Q ss_pred Ccee-------------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEec
Q psy7433 119 GDIK-------------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHI 173 (213)
Q Consensus 119 ~~i~-------------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~ 173 (213)
.+++ ......+|+|+++.+-+|+.|..+++||......++.+++|.
T Consensus 238 ~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~cswsp~~~~i~ags~dr~vyvwd~~~r~~lyklpGh~--------- 308 (338)
T KOG0265|consen 238 NTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSPNGTKITAGSADRFVYVWDTTSRRILYKLPGHY--------- 308 (338)
T ss_pred ceEEEEEecccCCCCceEEEeecchhhhhhhcceeeccCCCCccccccccceEEEeecccccEEEEcCCcc---------
Confidence 9887 445678999999999999999999999999999999999998
Q ss_pred CCCeEEEEeCC-CCeEEEEecCCcEEEEeC
Q psy7433 174 GQGVTQLHVDG-GSRLFSCGADGSMKVRQL 202 (213)
Q Consensus 174 ~~~v~~~~~~~-~~~l~s~~~d~~i~iw~~ 202 (213)
+.|+++.|+| ...|.+++.|.+|++=++
T Consensus 309 -gsvn~~~Fhp~e~iils~~sdk~i~lgei 337 (338)
T KOG0265|consen 309 -GSVNEVDFHPTEPIILSCSSDKTIYLGEI 337 (338)
T ss_pred -eeEEEeeecCCCcEEEEeccCceeEeecc
Confidence 8999999999 457999999999987543
|
|
| >KOG0289|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.4e-27 Score=169.33 Aligned_cols=185 Identities=23% Similarity=0.370 Sum_probs=167.9
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCc
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR 87 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~ 87 (213)
..+.++...|..+.+++| ..|..+.++|. ...+.+..+++|...|+.+.++|+...+++++.|..|++|.....
T Consensus 220 pgi~ald~~~s~~~ilTG---G~d~~av~~d~---~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~ 293 (506)
T KOG0289|consen 220 PGITALDIIPSSSKILTG---GEDKTAVLFDK---PSNQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLS 293 (506)
T ss_pred CCeeEEeecCCCCcceec---CCCCceEEEec---chhhhhhhccCcceEEEEEEeccchhheeecCCcceEEeeccccc
Confidence 458888888887889998 48999999998 677888999999999999999999999999999999999999877
Q ss_pred eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-------------------eceEEEEEccCCceEEEecCCCcEEE
Q psy7433 88 VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-------------------SPVKCLAIDPHEEFFVTGAGDGDIKV 148 (213)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-------------------~~v~~~~~~~~~~~l~~~~~dg~i~v 148 (213)
........|..+|+.+..+|.|.+|+.++.|+... ..+++.+|+|||.+|.+|+.|+.+++
T Consensus 294 s~~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vki 373 (506)
T KOG0289|consen 294 SEPTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKI 373 (506)
T ss_pred cCccccccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEE
Confidence 77777788999999999999999999999999775 34899999999999999999999999
Q ss_pred EEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEecCCcEEEEeCCCCccc
Q psy7433 149 WSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 149 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~d~~i~iw~~~~~~~~ 208 (213)
||++++.....|++|. ++|..++|+.+++ |++++.|+.|++||++..+.+
T Consensus 374 wdlks~~~~a~Fpght----------~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~ 424 (506)
T KOG0289|consen 374 WDLKSQTNVAKFPGHT----------GPVKAISFSENGYWLATAADDGSVKLWDLRKLKNF 424 (506)
T ss_pred EEcCCccccccCCCCC----------CceeEEEeccCceEEEEEecCCeEEEEEehhhccc
Confidence 9999999999999987 8999999999776 899999999999999977543
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=9e-26 Score=185.12 Aligned_cols=181 Identities=17% Similarity=0.240 Sum_probs=153.7
Q ss_pred cCceEEEEEeC-CCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec-CCCEEEEEcCCCcEEEEec
Q psy7433 7 NKITSDFVFLG-SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP-QHQLLISAGKKGDICVIDL 84 (213)
Q Consensus 7 ~~~v~~~~~~~-~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~iwd~ 84 (213)
...|.+++|+| ++.+|+++ +.|++|++||+ .+.+.+..+.+|...|.+++|+| ++.+|++|+.|+.|++||+
T Consensus 532 ~~~v~~l~~~~~~~~~las~---~~Dg~v~lWd~---~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~ 605 (793)
T PLN00181 532 RSKLSGICWNSYIKSQVASS---NFEGVVQVWDV---ARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSI 605 (793)
T ss_pred cCceeeEEeccCCCCEEEEE---eCCCeEEEEEC---CCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEEC
Confidence 46789999987 57889998 68999999998 45667788889999999999997 7899999999999999999
Q ss_pred cCceEEEecccCCCCeeEEEec-CCCCEEEEecCCCcee------------------eceEEEEEccCCceEEEecCCCc
Q psy7433 85 RQRVIRSRFNAHESPVKCLAID-PHEEFFVTGAGDGDIK------------------SPVKCLAIDPHEEFFVTGAGDGD 145 (213)
Q Consensus 85 ~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~~~~~~~~i~------------------~~v~~~~~~~~~~~l~~~~~dg~ 145 (213)
+++..+..+.. ...+.++.|+ +++..|++|+.|+.++ ..|.++.|. ++.+|++++.|+.
T Consensus 606 ~~~~~~~~~~~-~~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~ 683 (793)
T PLN00181 606 NQGVSIGTIKT-KANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNT 683 (793)
T ss_pred CCCcEEEEEec-CCCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEe-CCCEEEEEECCCE
Confidence 99888877764 4678999995 5789999999998776 468889997 6789999999999
Q ss_pred EEEEEccCC------eeeeeecCCCCceeEEEecCCCeEEEEeCCC-CeEEEEecCCcEEEEeCCCC
Q psy7433 146 IKVWSLSGN------HLLYNFPGEHARSSFFKHIGQGVTQLHVDGG-SRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 146 i~v~d~~~~------~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~d~~i~iw~~~~~ 205 (213)
|++||++.+ .++..+.+|. ..+..+.|+|+ ++|++|+.|+.|++|+....
T Consensus 684 ikiWd~~~~~~~~~~~~l~~~~gh~----------~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~ 740 (793)
T PLN00181 684 LKLWDLSMSISGINETPLHSFMGHT----------NVKNFVGLSVSDGYIATGSETNEVFVYHKAFP 740 (793)
T ss_pred EEEEeCCCCccccCCcceEEEcCCC----------CCeeEEEEcCCCCEEEEEeCCCEEEEEECCCC
Confidence 999999743 4556666664 67899999985 57999999999999997654
|
|
| >KOG0313|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-26 Score=164.76 Aligned_cols=196 Identities=16% Similarity=0.249 Sum_probs=162.2
Q ss_pred ccccccCceEEEEEeCCCC---eEEEeeccCCCccEEEEeCCCcccc-cceeeeeeecCCceEEEEecCCCEEEEEcCCC
Q psy7433 2 TYQCHNKITSDFVFLGSCS---LVATAGHSSESKNVCLWDSLLPQKK-ALVQAFVCHDQGASSLVFAPQHQLLISAGKKG 77 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~---~l~~~g~~s~~~~i~iwd~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 77 (213)
++.||.++|.+++|.-... .|+++ +.|.++++|.++.+... +.+..-++|...|-++...++|..+++|+.|.
T Consensus 139 ~~~Ght~~ik~v~~v~~n~~~~~fvsa---s~Dqtl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~ 215 (423)
T KOG0313|consen 139 TIVGHTGPIKSVAWVIKNSSSCLFVSA---SMDQTLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWDT 215 (423)
T ss_pred EEecCCcceeeeEEEecCCccceEEEe---cCCceEEEEEecCchhhhhHHhHhcccccceeEEEecCCCCeEEeecccc
Confidence 4679999999888864333 58888 79999999998643222 23344458999999999999999999999999
Q ss_pred cEEEEeccC-------------------------ceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee----------
Q psy7433 78 DICVIDLRQ-------------------------RVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK---------- 122 (213)
Q Consensus 78 ~v~iwd~~~-------------------------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~---------- 122 (213)
.|.+|+..+ +.++..+.+|..+|.++.|++ ...+.+++.|.+|+
T Consensus 216 ~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~~ 294 (423)
T KOG0313|consen 216 MLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGLK 294 (423)
T ss_pred eeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcC-CCceEeecccceEEEEEeecccce
Confidence 999999321 124556788999999999998 77899999999998
Q ss_pred ------eceEEEEEccCCceEEEecCCCcEEEEEccCC---eeeeeecCCCCceeEEEecCCCeEEEEeCCC--CeEEEE
Q psy7433 123 ------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGN---HLLYNFPGEHARSSFFKHIGQGVTQLHVDGG--SRLFSC 191 (213)
Q Consensus 123 ------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~l~s~ 191 (213)
..+.++.++|..++|++|+.|..|++||.|++ -..+++.+|. ..|.++.|+|. .+|+++
T Consensus 295 ~~~~~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~----------nwVssvkwsp~~~~~~~S~ 364 (423)
T KOG0313|consen 295 STLTTNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHK----------NWVSSVKWSPTNEFQLVSG 364 (423)
T ss_pred eeeecCcceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecch----------hhhhheecCCCCceEEEEE
Confidence 78899999999999999999999999999865 3456677776 78999999994 359999
Q ss_pred ecCCcEEEEeCCCCcccccc
Q psy7433 192 GADGSMKVRQLPDRDAVVHT 211 (213)
Q Consensus 192 ~~d~~i~iw~~~~~~~~~~~ 211 (213)
+.|+++++||+++.+.++..
T Consensus 365 S~D~t~klWDvRS~k~plyd 384 (423)
T KOG0313|consen 365 SYDNTVKLWDVRSTKAPLYD 384 (423)
T ss_pred ecCCeEEEEEeccCCCccee
Confidence 99999999999988755544
|
|
| >KOG0264|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-26 Score=167.36 Aligned_cols=200 Identities=21% Similarity=0.349 Sum_probs=157.2
Q ss_pred ccccccCceEEEEEeCCCC-eEEEeeccCCCccEEEEeCCCccc----ccceeeeeeecCCceEEEEec-CCCEEEEEcC
Q psy7433 2 TYQCHNKITSDFVFLGSCS-LVATAGHSSESKNVCLWDSLLPQK----KALVQAFVCHDQGASSLVFAP-QHQLLISAGK 75 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~-~l~~~g~~s~~~~i~iwd~~~~~~----~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~ 75 (213)
+|.||++.-++++|++... .|+++ +.|++|++||++.... ......+.+|...|..++|++ +..++++++.
T Consensus 172 ~L~gH~~eg~glsWn~~~~g~Lls~---~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~d 248 (422)
T KOG0264|consen 172 RLKGHEKEGYGLSWNRQQEGTLLSG---SDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGD 248 (422)
T ss_pred EEEeecccccccccccccceeEeec---cCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecC
Confidence 6889999889999999544 56666 6999999999953322 234566789999999999999 5678999999
Q ss_pred CCcEEEEecc--CceEEEecccCCCCeeEEEecC-CCCEEEEecCCCcee------------------eceEEEEEccCC
Q psy7433 76 KGDICVIDLR--QRVIRSRFNAHESPVKCLAIDP-HEEFFVTGAGDGDIK------------------SPVKCLAIDPHE 134 (213)
Q Consensus 76 d~~v~iwd~~--~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~i~------------------~~v~~~~~~~~~ 134 (213)
|+.+.|||+| +.++.....+|..++.|++|+| ++..||+|+.|+++. ..|.++.|+|..
T Consensus 249 d~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~ 328 (422)
T KOG0264|consen 249 DGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHN 328 (422)
T ss_pred CCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCC
Confidence 9999999999 5566677788999999999999 566899999999986 789999999975
Q ss_pred c-eEEEecCCCcEEEEEccCCeeeee-ecCCC-CceeE--EEecCCCeEEEEeCCCC--eEEEEecCCcEEEEeCCC
Q psy7433 135 E-FFVTGAGDGDIKVWSLSGNHLLYN-FPGEH-ARSSF--FKHIGQGVTQLHVDGGS--RLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 135 ~-~l~~~~~dg~i~v~d~~~~~~~~~-~~~~~-~~~~~--~~~~~~~v~~~~~~~~~--~l~s~~~d~~i~iw~~~~ 204 (213)
. .|++++.|+.+.|||+..-...+. -.+.. .+... ...|...|..+.|+|.. .++|++.|+.+.||.+..
T Consensus 329 etvLASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s~ 405 (422)
T KOG0264|consen 329 ETVLASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMAE 405 (422)
T ss_pred CceeEecccCCcEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeeccc
Confidence 5 889999999999999953222211 11111 11111 22344789999999954 489999999999999873
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-25 Score=173.55 Aligned_cols=173 Identities=13% Similarity=0.178 Sum_probs=137.1
Q ss_pred CCCccEEEEeCCCcccccceeeeeeecCCceEEEEecC-CCEEEEEcCCCcEEEEeccCce--------EEEecccCCCC
Q psy7433 29 SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQ-HQLLISAGKKGDICVIDLRQRV--------IRSRFNAHESP 99 (213)
Q Consensus 29 s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~v~iwd~~~~~--------~~~~~~~~~~~ 99 (213)
+.++.|++|+. .....+..+.+|...|.+++|+|+ +++|++|+.|+.|++||+.++. ++..+.+|...
T Consensus 51 G~~gvI~L~~~---~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~ 127 (568)
T PTZ00420 51 GLIGAIRLENQ---MRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKK 127 (568)
T ss_pred CceeEEEeeec---CCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCc
Confidence 46788999997 345677788899999999999996 7899999999999999997642 33456789999
Q ss_pred eeEEEecCCCCE-EEEecCCCcee----------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecC
Q psy7433 100 VKCLAIDPHEEF-FVTGAGDGDIK----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPG 162 (213)
Q Consensus 100 i~~~~~~~~~~~-l~~~~~~~~i~----------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~ 162 (213)
|.+++|+|++.. +++++.|+.++ ..|.+++|+|+|.+|++++.|+.|++||+++++.+..+.+
T Consensus 128 V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~g 207 (568)
T PTZ00420 128 ISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINMPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFHI 207 (568)
T ss_pred EEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEecCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 999999998875 56889999886 4689999999999999999999999999999999988888
Q ss_pred CCCceeEEEecCCCeEEEEeCCC-CeEEEEecCC----cEEEEeCCCCcccc
Q psy7433 163 EHARSSFFKHIGQGVTQLHVDGG-SRLFSCGADG----SMKVRQLPDRDAVV 209 (213)
Q Consensus 163 ~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~d~----~i~iw~~~~~~~~~ 209 (213)
|...... ..+....|+++ ++|++++.|+ .|+|||+++...++
T Consensus 208 H~g~~~s-----~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl 254 (568)
T PTZ00420 208 HDGGKNT-----KNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSAL 254 (568)
T ss_pred ccCCcee-----EEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCce
Confidence 7621000 01222234454 5788887764 79999999644443
|
|
| >KOG0310|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-26 Score=168.05 Aligned_cols=184 Identities=24% Similarity=0.430 Sum_probs=158.8
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecC-CCEEEEEcCCCcEEEEe
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQ-HQLLISAGKKGDICVID 83 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~v~iwd 83 (213)
...+.|.+++|-.||++||+| ...|.|+++|. .+...++.+++|..++..+.|+|+ +..+++|++|+.+++||
T Consensus 66 rFk~~v~s~~fR~DG~LlaaG---D~sG~V~vfD~---k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d 139 (487)
T KOG0310|consen 66 RFKDVVYSVDFRSDGRLLAAG---DESGHVKVFDM---KSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWD 139 (487)
T ss_pred hhccceeEEEeecCCeEEEcc---CCcCcEEEecc---ccHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEE
Confidence 456789999999999999999 78999999997 566778889999999999999995 56778899999999999
Q ss_pred ccCceEEEecccCCCCeeEEEecCC-CCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCCCc
Q psy7433 84 LRQRVIRSRFNAHESPVKCLAIDPH-EEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDGD 145 (213)
Q Consensus 84 ~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg~ 145 (213)
+.+......+.+|.+.|.|.+++|. +..+++|+.||.++ .+|..+.+-|.|..+++++.+ .
T Consensus 140 ~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~elnhg~pVe~vl~lpsgs~iasAgGn-~ 218 (487)
T KOG0310|consen 140 LSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVELNHGCPVESVLALPSGSLIASAGGN-S 218 (487)
T ss_pred cCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEecCCCceeeEEEcCCCCEEEEcCCC-e
Confidence 9998876688999999999999995 45899999999998 789999999999999998765 7
Q ss_pred EEEEEccCCe-eeeeecCCCCceeEEEecCCCeEEEEeCCC-CeEEEEecCCcEEEEeCCCC
Q psy7433 146 IKVWSLSGNH-LLYNFPGEHARSSFFKHIGQGVTQLHVDGG-SRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 146 i~v~d~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~d~~i~iw~~~~~ 205 (213)
++|||+-+|. .+.....|+ ..|+|+.+..+ .+|++++-|+.+++||+.+-
T Consensus 219 vkVWDl~~G~qll~~~~~H~----------KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~ 270 (487)
T KOG0310|consen 219 VKVWDLTTGGQLLTSMFNHN----------KTVTCLRLASDSTRLLSGSLDRHVKVFDTTNY 270 (487)
T ss_pred EEEEEecCCceehhhhhccc----------ceEEEEEeecCCceEeecccccceEEEEccce
Confidence 9999998554 444554476 68999999865 46999999999999996654
|
|
| >KOG0269|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=3e-27 Score=181.03 Aligned_cols=190 Identities=23% Similarity=0.388 Sum_probs=157.7
Q ss_pred eEEEEEeC-CCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec-CCCEEEEEcCCCcEEEEeccCc
Q psy7433 10 TSDFVFLG-SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP-QHQLLISAGKKGDICVIDLRQR 87 (213)
Q Consensus 10 v~~~~~~~-~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~iwd~~~~ 87 (213)
+..+.|.. ..++|||+ +.+|.|.+||+......+.+..+..|...++++.|++ ..++|++|+.||.|++||++..
T Consensus 90 ~~DVkW~~~~~NlIAT~---s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~ 166 (839)
T KOG0269|consen 90 AADVKWGQLYSNLIATC---STNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSK 166 (839)
T ss_pred hhhcccccchhhhheee---cCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecc
Confidence 44566765 56789999 8999999999964434667778889999999999998 5689999999999999999999
Q ss_pred eEEEecccCCCCeeEEEecC-CCCEEEEecCCCcee------------------eceEEEEEccCCceEEEecCCCcEEE
Q psy7433 88 VIRSRFNAHESPVKCLAIDP-HEEFFVTGAGDGDIK------------------SPVKCLAIDPHEEFFVTGAGDGDIKV 148 (213)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~i~------------------~~v~~~~~~~~~~~l~~~~~dg~i~v 148 (213)
+....+.+....|+.+.|+| .+..|+++...|.+. ++|.|+.|+|++.+||+|+.|+.|+|
T Consensus 167 ~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vki 246 (839)
T KOG0269|consen 167 KSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKI 246 (839)
T ss_pred cccccccccchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEE
Confidence 88888888888999999999 677899999999886 89999999999999999999999999
Q ss_pred EEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC--eEEEEe--cCCcEEEEeCCCCcccccc
Q psy7433 149 WSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS--RLFSCG--ADGSMKVRQLPDRDAVVHT 211 (213)
Q Consensus 149 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~--~d~~i~iw~~~~~~~~~~~ 211 (213)
||+...+.......+. ..++.++.|-|.. +|++++ .|-.|+|||++....+..+
T Consensus 247 Wd~t~~~~~~~~tInT---------iapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYIP~~t 304 (839)
T KOG0269|consen 247 WDMTDSRAKPKHTINT---------IAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYIPYAT 304 (839)
T ss_pred EeccCCCccceeEEee---------cceeeeeeeccCccchhhhhhccccceEEEEeecccccccee
Confidence 9997544332222222 2689999999953 588776 4779999999987665443
|
|
| >KOG0306|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=5e-26 Score=174.08 Aligned_cols=186 Identities=19% Similarity=0.354 Sum_probs=171.6
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
++.||...|++++++.+...++++ .++.+++|+. .+.++++++. .+.+.+..|.|.+++++.|...|.+.+
T Consensus 368 ~~~GHR~dVRsl~vS~d~~~~~Sg----a~~SikiWn~---~t~kciRTi~--~~y~l~~~Fvpgd~~Iv~G~k~Gel~v 438 (888)
T KOG0306|consen 368 EIGGHRSDVRSLCVSSDSILLASG----AGESIKIWNR---DTLKCIRTIT--CGYILASKFVPGDRYIVLGTKNGELQV 438 (888)
T ss_pred eeccchhheeEEEeecCceeeeec----CCCcEEEEEc---cCcceeEEec--cccEEEEEecCCCceEEEeccCCceEE
Confidence 577999999999999999888888 6899999998 6788999886 348899999999999999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------------------eceEEEEEcc
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------------------SPVKCLAIDP 132 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------------------~~v~~~~~~~ 132 (213)
||+.+...+..+++|.+.++.++.+||++.+++++.|.+++ ..|.|+.+||
T Consensus 439 fdlaS~~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Sp 518 (888)
T KOG0306|consen 439 FDLASASLVETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSP 518 (888)
T ss_pred EEeehhhhhhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcC
Confidence 99999999999999999999999999999999999999987 6899999999
Q ss_pred CCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCc
Q psy7433 133 HEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 133 ~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~ 206 (213)
||++|+++--|.+++||-+.+.+..-++.+|. -||.|+..+|+. .++|||.|.+|++|-+.=+.
T Consensus 519 dgk~LaVsLLdnTVkVyflDtlKFflsLYGHk----------LPV~smDIS~DSklivTgSADKnVKiWGLdFGD 583 (888)
T KOG0306|consen 519 DGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHK----------LPVLSMDISPDSKLIVTGSADKNVKIWGLDFGD 583 (888)
T ss_pred CCcEEEEEeccCeEEEEEecceeeeeeecccc----------cceeEEeccCCcCeEEeccCCCceEEeccccch
Confidence 99999999999999999999999999999987 689999999975 58999999999999886543
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.9e-25 Score=171.19 Aligned_cols=189 Identities=11% Similarity=0.148 Sum_probs=145.6
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCc-------cccc---ceeeeeeecCCceEEEEec-CCCEEEEEcCC
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLP-------QKKA---LVQAFVCHDQGASSLVFAP-QHQLLISAGKK 76 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~-------~~~~---~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d 76 (213)
..|+....++++..++++ +.+.....|+.... ..++ ....+.+|.+.|.+++|+| ++++|++++.|
T Consensus 21 ~~i~~~~~~~d~~~~~~~---n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~D 97 (493)
T PTZ00421 21 LNVTPSTALWDCSNTIAC---NDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASED 97 (493)
T ss_pred eccccccccCCCCCcEeE---CCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCC
Confidence 345555666676666665 45666666664210 1111 1124678999999999999 88999999999
Q ss_pred CcEEEEeccCc-------eEEEecccCCCCeeEEEecCCC-CEEEEecCCCcee-----------------eceEEEEEc
Q psy7433 77 GDICVIDLRQR-------VIRSRFNAHESPVKCLAIDPHE-EFFVTGAGDGDIK-----------------SPVKCLAID 131 (213)
Q Consensus 77 ~~v~iwd~~~~-------~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~~~~i~-----------------~~v~~~~~~ 131 (213)
+.|++||+.++ +++..+.+|...|.+++|+|++ +.|++++.|+.++ ..|.+++|+
T Consensus 98 gtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~s 177 (493)
T PTZ00421 98 GTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWN 177 (493)
T ss_pred CEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEEEEEE
Confidence 99999999764 3466788899999999999975 6899999999886 569999999
Q ss_pred cCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCC-CeEEEEe----cCCcEEEEeCCCCc
Q psy7433 132 PHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG-SRLFSCG----ADGSMKVRQLPDRD 206 (213)
Q Consensus 132 ~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~----~d~~i~iw~~~~~~ 206 (213)
|++.+|++++.|+.|++||+++++.+..+..|.. ..+..+.|.++ +.+++++ .|+.|++||+++..
T Consensus 178 pdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~---------~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~ 248 (493)
T PTZ00421 178 LDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHAS---------AKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMA 248 (493)
T ss_pred CCCCEEEEecCCCEEEEEECCCCcEEEEEecCCC---------CcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCC
Confidence 9999999999999999999999998888887752 23456677774 4566554 47899999998755
Q ss_pred cc
Q psy7433 207 AV 208 (213)
Q Consensus 207 ~~ 208 (213)
..
T Consensus 249 ~p 250 (493)
T PTZ00421 249 SP 250 (493)
T ss_pred Cc
Confidence 43
|
|
| >KOG0772|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-26 Score=169.78 Aligned_cols=198 Identities=20% Similarity=0.284 Sum_probs=157.4
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCc-ccccceeeee-eecCCceEEEEecCCCEEEEEcCCCcE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLP-QKKALVQAFV-CHDQGASSLVFAPQHQLLISAGKKGDI 79 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~-~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~v 79 (213)
.|++|++.|.++++.|.|..|++| +.|.+|++||+.-. ...+..+.++ .....|+++.|++.|..|++.+.....
T Consensus 162 ~l~hgtk~Vsal~~Dp~GaR~~sG---s~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqa 238 (641)
T KOG0772|consen 162 QLKHGTKIVSALAVDPSGARFVSG---SLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQA 238 (641)
T ss_pred eccCCceEEEEeeecCCCceeeec---cccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCcce
Confidence 478999999999999999999999 78999999998421 1112223332 345679999999999999888888999
Q ss_pred EEEeccCceEEEec------------ccCCCCeeEEEecCCC-CEEEEecCCCcee-----------------------e
Q psy7433 80 CVIDLRQRVIRSRF------------NAHESPVKCLAIDPHE-EFFVTGAGDGDIK-----------------------S 123 (213)
Q Consensus 80 ~iwd~~~~~~~~~~------------~~~~~~i~~~~~~~~~-~~l~~~~~~~~i~-----------------------~ 123 (213)
+++|....+..... ++|...++|.+|+|.. ..|++++.|++++ .
T Consensus 239 kl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv 318 (641)
T KOG0772|consen 239 KLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRV 318 (641)
T ss_pred eEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCccc
Confidence 99997655444332 4577889999999965 4799999999987 7
Q ss_pred ceEEEEEccCCceEEEecCCCcEEEEEccCC--eeeeeec-CCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEE
Q psy7433 124 PVKCLAIDPHEEFFVTGAGDGDIKVWSLSGN--HLLYNFP-GEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKV 199 (213)
Q Consensus 124 ~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~--~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~i 199 (213)
+++..+|+|+|++||+|..||.|.+|+.+.. ++...+. .|.. +..|+++.|++++ +|++-+.|+++++
T Consensus 319 ~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~--------g~~Itsi~FS~dg~~LlSRg~D~tLKv 390 (641)
T KOG0772|consen 319 PVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLP--------GQDITSISFSYDGNYLLSRGFDDTLKV 390 (641)
T ss_pred CceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCC--------CCceeEEEeccccchhhhccCCCceee
Confidence 8899999999999999999999999998533 2333332 3321 3589999999865 6999999999999
Q ss_pred EeCCCCccccc
Q psy7433 200 RQLPDRDAVVH 210 (213)
Q Consensus 200 w~~~~~~~~~~ 210 (213)
||++..++++.
T Consensus 391 WDLrq~kkpL~ 401 (641)
T KOG0772|consen 391 WDLRQFKKPLN 401 (641)
T ss_pred eeccccccchh
Confidence 99998877654
|
|
| >KOG0292|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-25 Score=175.06 Aligned_cols=190 Identities=22% Similarity=0.395 Sum_probs=169.8
Q ss_pred CccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEE
Q psy7433 1 MTYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDIC 80 (213)
Q Consensus 1 ~~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 80 (213)
.+|.||-..|+.+.|++.-.+++++ |.|.+|+||++ .+.+++..+.+|+..|.|..|+|....+++++-|-+|+
T Consensus 87 ftL~GHlDYVRt~~FHheyPWIlSA---SDDQTIrIWNw---qsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVR 160 (1202)
T KOG0292|consen 87 FTLLGHLDYVRTVFFHHEYPWILSA---SDDQTIRIWNW---QSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVR 160 (1202)
T ss_pred hhhccccceeEEeeccCCCceEEEc---cCCCeEEEEec---cCCceEEEEecCceEEEeeccCCccceEEEecccceEE
Confidence 3788999999999999999999999 89999999999 78999999999999999999999999999999999999
Q ss_pred EEeccCce-----------------------------EEEecccCCCCeeEEEecCCCCEEEEecCCCcee---------
Q psy7433 81 VIDLRQRV-----------------------------IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK--------- 122 (213)
Q Consensus 81 iwd~~~~~-----------------------------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~--------- 122 (213)
+||+..-+ ..+.+.+|...|.-++|+|.-..+++|+.|..++
T Consensus 161 VWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKa 240 (1202)
T KOG0292|consen 161 VWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKA 240 (1202)
T ss_pred EEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEeccccc
Confidence 99985210 1234567888999999999999999999999997
Q ss_pred ----------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEe
Q psy7433 123 ----------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCG 192 (213)
Q Consensus 123 ----------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~ 192 (213)
..|.++-|+|...++++.++|+.|+|||+.....+++++..+ .....++.+|...|++++
T Consensus 241 WEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~tfrren----------dRFW~laahP~lNLfAAg 310 (1202)
T KOG0292|consen 241 WEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTFRREN----------DRFWILAAHPELNLFAAG 310 (1202)
T ss_pred eeehhhhcccCCcceEEecCccceeEecCCCccEEEEecccccceeeeeccC----------CeEEEEEecCCcceeeee
Confidence 899999999999999999999999999999999999998766 678889999977777788
Q ss_pred cCCcEEEEeCCCCc
Q psy7433 193 ADGSMKVRQLPDRD 206 (213)
Q Consensus 193 ~d~~i~iw~~~~~~ 206 (213)
.|+-+.+|.+...+
T Consensus 311 HDsGm~VFkleREr 324 (1202)
T KOG0292|consen 311 HDSGMIVFKLERER 324 (1202)
T ss_pred cCCceEEEEEcccC
Confidence 88888888887543
|
|
| >KOG0275|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.4e-27 Score=166.24 Aligned_cols=181 Identities=18% Similarity=0.297 Sum_probs=168.3
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeee-eecCCceEEEEecCCCEEEEEcCCCcEEEEe
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV-CHDQGASSLVFAPQHQLLISAGKKGDICVID 83 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd 83 (213)
-+..+|.|+.|+.|...+|+| +.||.|++|.+ .++.+++.+. +|...|+++.|+.|+..+++++.|-++++--
T Consensus 261 Mmd~aVlci~FSRDsEMlAsG---sqDGkIKvWri---~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHG 334 (508)
T KOG0275|consen 261 MMDDAVLCISFSRDSEMLASG---SQDGKIKVWRI---ETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHG 334 (508)
T ss_pred ecccceEEEeecccHHHhhcc---CcCCcEEEEEE---ecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEec
Confidence 467899999999999999999 89999999999 7889999887 8999999999999999999999999999999
Q ss_pred ccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------------------------------
Q psy7433 84 LRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----------------------------------------- 122 (213)
Q Consensus 84 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------------------------------- 122 (213)
+.+|+++..+++|.+.|+...|.++|..+++++.|++++
T Consensus 335 lKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrs 414 (508)
T KOG0275|consen 335 LKSGKCLKEFRGHSSYVNEATFTDDGHHIISASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRS 414 (508)
T ss_pred cccchhHHHhcCccccccceEEcCCCCeEEEecCCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCC
Confidence 999999999999999999999999999999999999987
Q ss_pred -----------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEE
Q psy7433 123 -----------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQ 179 (213)
Q Consensus 123 -----------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 179 (213)
+...+..++|.|.++.+.++|+.++.|.+.+++...++..|. ..+..
T Consensus 415 ntv~imn~qGQvVrsfsSGkREgGdFi~~~lSpkGewiYcigED~vlYCF~~~sG~LE~tl~VhE----------kdvIG 484 (508)
T KOG0275|consen 415 NTVYIMNMQGQVVRSFSSGKREGGDFINAILSPKGEWIYCIGEDGVLYCFSVLSGKLERTLPVHE----------KDVIG 484 (508)
T ss_pred CeEEEEeccceEEeeeccCCccCCceEEEEecCCCcEEEEEccCcEEEEEEeecCceeeeeeccc----------ccccc
Confidence 566778899999999999999999999999999999999887 56888
Q ss_pred EEeCC-CCeEEEEecCCcEEEEe
Q psy7433 180 LHVDG-GSRLFSCGADGSMKVRQ 201 (213)
Q Consensus 180 ~~~~~-~~~l~s~~~d~~i~iw~ 201 (213)
++-+| .+.+++-+.||.+++|.
T Consensus 485 l~HHPHqNllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 485 LTHHPHQNLLASYSEDGLLKLWK 507 (508)
T ss_pred cccCcccchhhhhcccchhhhcC
Confidence 88888 46799999999999994
|
|
| >KOG0299|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=5e-26 Score=165.22 Aligned_cols=195 Identities=23% Similarity=0.305 Sum_probs=169.0
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEec
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDL 84 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~ 84 (213)
+|.+.+.+++.++||++||++ ..|..|.||+. .+.+.++.+.+|.+.|.+++|-.....|++++.|+.+++|++
T Consensus 200 ~h~keil~~avS~Dgkylatg---g~d~~v~Iw~~---~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~ 273 (479)
T KOG0299|consen 200 GHVKEILTLAVSSDGKYLATG---GRDRHVQIWDC---DTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSI 273 (479)
T ss_pred cccceeEEEEEcCCCcEEEec---CCCceEEEecC---cccchhhcccccccceeeeeeecCccceeeeecCCceEEEeh
Confidence 789999999999999999999 58999999999 678888889999999999999988889999999999999999
Q ss_pred cCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee----------------eceEEEEEccCCceEEEecCCCcEEE
Q psy7433 85 RQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----------------SPVKCLAIDPHEEFFVTGAGDGDIKV 148 (213)
Q Consensus 85 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------~~v~~~~~~~~~~~l~~~~~dg~i~v 148 (213)
+....+.++.+|++.|..+......+.+-+|+.|.+++ ..+-|++|-.+ ..+++|+.+|.|.+
T Consensus 274 ~~~s~vetlyGHqd~v~~IdaL~reR~vtVGgrDrT~rlwKi~eesqlifrg~~~sidcv~~In~-~HfvsGSdnG~IaL 352 (479)
T KOG0299|consen 274 DQLSYVETLYGHQDGVLGIDALSRERCVTVGGRDRTVRLWKIPEESQLIFRGGEGSIDCVAFIND-EHFVSGSDNGSIAL 352 (479)
T ss_pred hHhHHHHHHhCCccceeeechhcccceEEeccccceeEEEeccccceeeeeCCCCCeeeEEEecc-cceeeccCCceEEE
Confidence 99988889999999999999988888888888999887 57888888654 46999999999999
Q ss_pred EEccCCeeeeeecCCCCceeEE--EecCCCeEEEEeCCC-CeEEEEecCCcEEEEeCCCCc
Q psy7433 149 WSLSGNHLLYNFPGEHARSSFF--KHIGQGVTQLHVDGG-SRLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 149 ~d~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~-~~l~s~~~d~~i~iw~~~~~~ 206 (213)
|++.+.+++++....+...... ..+...|++++..|+ +.+++|+.+|.|++|-+.++.
T Consensus 353 Ws~~KKkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~ 413 (479)
T KOG0299|consen 353 WSLLKKKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGL 413 (479)
T ss_pred eeecccCceeEeeccccccCCccccccccceeeeEecccCceEEecCCCCceEEEEecCCc
Confidence 9999999988877655332221 111248999999985 579999999999999999883
|
|
| >KOG1446|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.3e-24 Score=149.30 Aligned_cols=195 Identities=18% Similarity=0.264 Sum_probs=155.2
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcC--CCcE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGK--KGDI 79 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~v 79 (213)
.|+.-...|.++.|+++|..++++ +.|.+++|||. ..+++++++..+.-.+..++|....+.++.++. |.+|
T Consensus 9 ~f~~~~~~i~sl~fs~~G~~lits---s~dDsl~LYd~---~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tI 82 (311)
T KOG1446|consen 9 VFRETNGKINSLDFSDDGLLLITS---SEDDSLRLYDS---LSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTI 82 (311)
T ss_pred ccccCCCceeEEEecCCCCEEEEe---cCCCeEEEEEc---CCCceeeEeecccccccEEEEecCCceEEEccCCCCCce
Confidence 345567889999999999999998 79999999999 677888888878888999999887777777665 8899
Q ss_pred EEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-------------------------------------
Q psy7433 80 CVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------------------------- 122 (213)
Q Consensus 80 ~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------------------------- 122 (213)
+..++.+.+.++.|.+|...|..++.+|-+..|++++.|++++
T Consensus 83 ryLsl~dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~pi~AfDp~GLifA~~~~~~ 162 (311)
T KOG1446|consen 83 RYLSLHDNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGRPIAAFDPEGLIFALANGSE 162 (311)
T ss_pred EEEEeecCceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCCCcceeECCCCcEEEEecCCC
Confidence 9999999999999999999999999999999999999999887
Q ss_pred -------------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCe
Q psy7433 123 -------------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGV 177 (213)
Q Consensus 123 -------------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v 177 (213)
...+.|.|+|+|++|+.++..+.+++.|.-.|..+.++..+... +.--
T Consensus 163 ~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~-------~~~~ 235 (311)
T KOG1446|consen 163 LIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNA-------GNLP 235 (311)
T ss_pred eEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCC-------CCcc
Confidence 34455666666666666666666666666556555555554321 1122
Q ss_pred EEEEeCCCCe-EEEEecCCcEEEEeCCCCcccc
Q psy7433 178 TQLHVDGGSR-LFSCGADGSMKVRQLPDRDAVV 209 (213)
Q Consensus 178 ~~~~~~~~~~-l~s~~~d~~i~iw~~~~~~~~~ 209 (213)
....|.|++. +++|+.||.|.+|++.++.++.
T Consensus 236 ~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~v~ 268 (311)
T KOG1446|consen 236 LSATFTPDSKFVLSGSDDGTIHVWNLETGKKVA 268 (311)
T ss_pred eeEEECCCCcEEEEecCCCcEEEEEcCCCcEee
Confidence 5677889765 7888899999999999887653
|
|
| >KOG0289|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.4e-25 Score=159.54 Aligned_cols=186 Identities=22% Similarity=0.318 Sum_probs=161.3
Q ss_pred CccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEE
Q psy7433 1 MTYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDIC 80 (213)
Q Consensus 1 ~~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 80 (213)
++|+||...|+.+.++|+...++++ +.|..|++|... ..........|..+|+.+..+|+|.||++++.|+...
T Consensus 255 ~~~~Gh~kki~~v~~~~~~~~v~~a---Sad~~i~vws~~---~~s~~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~ 328 (506)
T KOG0289|consen 255 ATLKGHTKKITSVKFHKDLDTVITA---SADEIIRVWSVP---LSSEPTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWA 328 (506)
T ss_pred hhccCcceEEEEEEeccchhheeec---CCcceEEeeccc---cccCccccccccccceeeeeccCCcEEEEecCCceEE
Confidence 4789999999999999999999999 899999999983 3345556677999999999999999999999999999
Q ss_pred EEeccCceEEEeccc--CCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEec
Q psy7433 81 VIDLRQRVIRSRFNA--HESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGA 141 (213)
Q Consensus 81 iwd~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~ 141 (213)
+.|++++..+..... ..-.+++.+|+|||..|.+|..|+.++ ++|..++|+.+|-||+++.
T Consensus 329 Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsENGY~Lat~a 408 (506)
T KOG0289|consen 329 FSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSENGYWLATAA 408 (506)
T ss_pred EEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCCccccccCCCCCCceeEEEeccCceEEEEEe
Confidence 999999987766553 234589999999999999999999987 8999999999999999999
Q ss_pred CCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEe
Q psy7433 142 GDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQ 201 (213)
Q Consensus 142 ~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~ 201 (213)
.|+.|++||+|..+...++..... .++.++.|++.+ +|+.++.|=.|++++
T Consensus 409 dd~~V~lwDLRKl~n~kt~~l~~~---------~~v~s~~fD~SGt~L~~~g~~l~Vy~~~ 460 (506)
T KOG0289|consen 409 DDGSVKLWDLRKLKNFKTIQLDEK---------KEVNSLSFDQSGTYLGIAGSDLQVYICK 460 (506)
T ss_pred cCCeEEEEEehhhcccceeecccc---------ccceeEEEcCCCCeEEeecceeEEEEEe
Confidence 999999999999888877776542 479999999854 577777776666665
|
|
| >KOG0640|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.3e-25 Score=154.47 Aligned_cols=198 Identities=17% Similarity=0.264 Sum_probs=163.3
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
||-.|..+|+++.|+|...+|+++ +.|++|+++|+....-.+-.+.++ ...+|.++.|+|.|.+|+.|.+...+++
T Consensus 167 TlYDH~devn~l~FHPre~ILiS~---srD~tvKlFDfsK~saKrA~K~~q-d~~~vrsiSfHPsGefllvgTdHp~~rl 242 (430)
T KOG0640|consen 167 TLYDHVDEVNDLDFHPRETILISG---SRDNTVKLFDFSKTSAKRAFKVFQ-DTEPVRSISFHPSGEFLLVGTDHPTLRL 242 (430)
T ss_pred ehhhccCcccceeecchhheEEec---cCCCeEEEEecccHHHHHHHHHhh-ccceeeeEeecCCCceEEEecCCCceeE
Confidence 677899999999999999999999 899999999994332233333333 3567999999999999999999999999
Q ss_pred EeccCceEEEecc---cCCCCeeEEEecCCCCEEEEecCCCcee-------------------eceEEEEEccCCceEEE
Q psy7433 82 IDLRQRVIRSRFN---AHESPVKCLAIDPHEEFFVTGAGDGDIK-------------------SPVKCLAIDPHEEFFVT 139 (213)
Q Consensus 82 wd~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~~~~i~-------------------~~v~~~~~~~~~~~l~~ 139 (213)
||+.+-++...-. .|.+.|+++.+++.++..++++.||.|+ ..|.+..|..+++|+++
T Consensus 243 Ydv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLs 322 (430)
T KOG0640|consen 243 YDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILS 322 (430)
T ss_pred EeccceeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEee
Confidence 9999987765443 4778999999999999999999999998 78999999999999999
Q ss_pred ecCCCcEEEEEccCCeeeeeecCCCCce---------------------------------------eEEEecCCCeEEE
Q psy7433 140 GAGDGDIKVWSLSGNHLLYNFPGEHARS---------------------------------------SFFKHIGQGVTQL 180 (213)
Q Consensus 140 ~~~dg~i~v~d~~~~~~~~~~~~~~~~~---------------------------------------~~~~~~~~~v~~~ 180 (213)
.+.|..+++|.+.+++++..+.+..... ..-..|.+.+..+
T Consensus 323 SG~DS~vkLWEi~t~R~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~slgHn~a~R~i 402 (430)
T KOG0640|consen 323 SGKDSTVKLWEISTGRMLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLSLGHNGAVRWI 402 (430)
T ss_pred cCCcceeeeeeecCCceEEEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhhhhhcccCCCCCceEE
Confidence 9999999999999998887766531000 0012355778888
Q ss_pred EeCCCC-eEEEEecCCcEEEEeCC
Q psy7433 181 HVDGGS-RLFSCGADGSMKVRQLP 203 (213)
Q Consensus 181 ~~~~~~-~l~s~~~d~~i~iw~~~ 203 (213)
.-+|.+ -+++++.|-.+|+|--+
T Consensus 403 ~HSP~~p~FmTcsdD~raRFWyrr 426 (430)
T KOG0640|consen 403 VHSPVEPAFMTCSDDFRARFWYRR 426 (430)
T ss_pred EeCCCCCceeeecccceeeeeeec
Confidence 888854 59999999999999654
|
|
| >KOG1446|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-24 Score=151.13 Aligned_cols=186 Identities=19% Similarity=0.244 Sum_probs=148.7
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
.|.||.+.|.+++.+|-++.++++ +.|++|++||++ ..++...+. ...-..++|+|+|-++|++.....|++
T Consensus 95 YF~GH~~~V~sL~~sP~~d~FlS~---S~D~tvrLWDlR---~~~cqg~l~--~~~~pi~AfDp~GLifA~~~~~~~IkL 166 (311)
T KOG1446|consen 95 YFPGHKKRVNSLSVSPKDDTFLSS---SLDKTVRLWDLR---VKKCQGLLN--LSGRPIAAFDPEGLIFALANGSELIKL 166 (311)
T ss_pred EcCCCCceEEEEEecCCCCeEEec---ccCCeEEeeEec---CCCCceEEe--cCCCcceeECCCCcEEEEecCCCeEEE
Confidence 478999999999999999999999 899999999995 344444443 334456899999999999988889999
Q ss_pred EeccCc--eEEEecc---cCCCCeeEEEecCCCCEEEEecCCCcee--------------------eceEEEEEccCCce
Q psy7433 82 IDLRQR--VIRSRFN---AHESPVKCLAIDPHEEFFVTGAGDGDIK--------------------SPVKCLAIDPHEEF 136 (213)
Q Consensus 82 wd~~~~--~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~~~~i~--------------------~~v~~~~~~~~~~~ 136 (213)
||++.. .+...+. ......+.+.|+|+|+.++.+...+.+. .-.....|.||+++
T Consensus 167 yD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~F 246 (311)
T KOG1446|consen 167 YDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSKF 246 (311)
T ss_pred EEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCCcE
Confidence 999864 3444443 3356789999999999999988888654 22357789999999
Q ss_pred EEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEecCCcEEEEeCCCCc
Q psy7433 137 FVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 137 l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~d~~i~iw~~~~~~ 206 (213)
+++|+.||+|++|++++++....+.+.. .+++.++.|+|... +++ .+..+.+|=.....
T Consensus 247 vl~gs~dg~i~vw~~~tg~~v~~~~~~~---------~~~~~~~~fnP~~~mf~s--a~s~l~fw~p~~~~ 306 (311)
T KOG1446|consen 247 VLSGSDDGTIHVWNLETGKKVAVLRGPN---------GGPVSCVRFNPRYAMFVS--ASSNLVFWLPDEDA 306 (311)
T ss_pred EEEecCCCcEEEEEcCCCcEeeEecCCC---------CCCccccccCCceeeeee--cCceEEEEeccccc
Confidence 9999999999999999999999998853 27899999999643 444 45578888665443
|
|
| >KOG1332|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-26 Score=155.08 Aligned_cols=189 Identities=19% Similarity=0.280 Sum_probs=159.6
Q ss_pred ccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec--CCCEEEEEcCCCcEEE
Q psy7433 4 QCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP--QHQLLISAGKKGDICV 81 (213)
Q Consensus 4 ~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~v~i 81 (213)
..|...|-++...--|+.|||+ +.|++|+|+.++.....+.+..+.+|.++|..++|-. .|.+|++++.||.|.|
T Consensus 8 t~H~D~IHda~lDyygkrlATc---sSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIi 84 (299)
T KOG1332|consen 8 TQHEDMIHDAQLDYYGKRLATC---SSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVII 84 (299)
T ss_pred hhhhhhhhHhhhhhhcceeeee---cCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEE
Confidence 3688888888888889999999 8999999999976555578899999999999999965 7899999999999999
Q ss_pred EeccCce--EEEecccCCCCeeEEEecCC--CCEEEEecCCCcee--------------------eceEEEEEccC---C
Q psy7433 82 IDLRQRV--IRSRFNAHESPVKCLAIDPH--EEFFVTGAGDGDIK--------------------SPVKCLAIDPH---E 134 (213)
Q Consensus 82 wd~~~~~--~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~~~~i~--------------------~~v~~~~~~~~---~ 134 (213)
|.-.+++ .......|...+++++|-|. |-.|++++.||.+. ..+++++|.|. |
T Consensus 85 Wke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g 164 (299)
T KOG1332|consen 85 WKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPG 164 (299)
T ss_pred EecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCc
Confidence 9988773 33455678999999999995 55899999999986 67899999986 4
Q ss_pred -----------ceEEEecCCCcEEEEEccCCe--eeeeecCCCCceeEEEecCCCeEEEEeCCC-----CeEEEEecCCc
Q psy7433 135 -----------EFFVTGAGDGDIKVWSLSGNH--LLYNFPGEHARSSFFKHIGQGVTQLHVDGG-----SRLFSCGADGS 196 (213)
Q Consensus 135 -----------~~l~~~~~dg~i~v~d~~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~~l~s~~~d~~ 196 (213)
+.|++|+.|..|+||+..+++ ...++.+|. +.|..++|.|. ..|++++.||+
T Consensus 165 ~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~----------dwVRDVAwaP~~gl~~s~iAS~SqDg~ 234 (299)
T KOG1332|consen 165 SLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHK----------DWVRDVAWAPSVGLPKSTIASCSQDGT 234 (299)
T ss_pred cccccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcc----------hhhhhhhhccccCCCceeeEEecCCCc
Confidence 469999999999999997652 333466665 78999999983 24999999999
Q ss_pred EEEEeCCCC
Q psy7433 197 MKVRQLPDR 205 (213)
Q Consensus 197 i~iw~~~~~ 205 (213)
+.||..+..
T Consensus 235 viIwt~~~e 243 (299)
T KOG1332|consen 235 VIIWTKDEE 243 (299)
T ss_pred EEEEEecCc
Confidence 999988744
|
|
| >KOG0310|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-24 Score=158.84 Aligned_cols=187 Identities=16% Similarity=0.252 Sum_probs=158.2
Q ss_pred ccccccCceEEEEEeCCCCe-EEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec-CCCEEEEEcCCCcE
Q psy7433 2 TYQCHNKITSDFVFLGSCSL-VATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP-QHQLLISAGKKGDI 79 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~-l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v 79 (213)
.|++|+.+|..+.|+|+++. |++| +.|+.+++||+. +...+..+.+|...|++.+|+| +...+++|++||.|
T Consensus 105 ~~~ah~apv~~~~f~~~d~t~l~s~---sDd~v~k~~d~s---~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~v 178 (487)
T KOG0310|consen 105 QLYAHQAPVHVTKFSPQDNTMLVSG---SDDKVVKYWDLS---TAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKV 178 (487)
T ss_pred HHhhccCceeEEEecccCCeEEEec---CCCceEEEEEcC---CcEEEEEecCCcceeEeeccccCCCeEEEecCCCceE
Confidence 47899999999999996654 5555 899999999994 4445667899999999999999 45689999999999
Q ss_pred EEEeccCc-eEEEecccCCCCeeEEEecCCCCEEEEecCCCc-ee----------------eceEEEEEccCCceEEEec
Q psy7433 80 CVIDLRQR-VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGD-IK----------------SPVKCLAIDPHEEFFVTGA 141 (213)
Q Consensus 80 ~iwd~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~-i~----------------~~v~~~~~~~~~~~l~~~~ 141 (213)
++||+++. ..+..+. |..+|..+.+-|.|..+++++.+.- +. ..|+|+.+..++..|++|+
T Consensus 179 rl~DtR~~~~~v~eln-hg~pVe~vl~lpsgs~iasAgGn~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~s 257 (487)
T KOG0310|consen 179 RLWDTRSLTSRVVELN-HGCPVESVLALPSGSLIASAGGNSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGS 257 (487)
T ss_pred EEEEeccCCceeEEec-CCCceeeEEEcCCCCEEEEcCCCeEEEEEecCCceehhhhhcccceEEEEEeecCCceEeecc
Confidence 99999987 6666665 8999999999999999999887642 11 6899999999999999999
Q ss_pred CCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCc
Q psy7433 142 GDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 142 ~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~ 206 (213)
-|+.+++||+.+.+.+..+... ++|.+++.+|++ .++.|..+|.+.+=+...++
T Consensus 258 LD~~VKVfd~t~~Kvv~s~~~~-----------~pvLsiavs~dd~t~viGmsnGlv~~rr~~~k~ 312 (487)
T KOG0310|consen 258 LDRHVKVFDTTNYKVVHSWKYP-----------GPVLSIAVSPDDQTVVIGMSNGLVSIRRREVKK 312 (487)
T ss_pred cccceEEEEccceEEEEeeecc-----------cceeeEEecCCCceEEEecccceeeeehhhccc
Confidence 9999999999999999988875 689999999965 58888899987776544433
|
|
| >KOG0288|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-25 Score=160.62 Aligned_cols=185 Identities=18% Similarity=0.257 Sum_probs=151.8
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
+|.|-.++|+++.|.++++.+++. +.|+.+++|++ ...+...++.+|.+.|+++.|......+++|+.|.+|++
T Consensus 214 tLaGs~g~it~~d~d~~~~~~iAa---s~d~~~r~Wnv---d~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~ 287 (459)
T KOG0288|consen 214 TLAGSLGNITSIDFDSDNKHVIAA---SNDKNLRLWNV---DSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKL 287 (459)
T ss_pred hhhccCCCcceeeecCCCceEEee---cCCCceeeeec---cchhhhhhhcccccceeeehhhccccceeeccccchhhh
Confidence 567778899999999999998888 68999999999 677788888899999999888765554666665555555
Q ss_pred Eec---------------------------------------cCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee
Q psy7433 82 IDL---------------------------------------RQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122 (213)
Q Consensus 82 wd~---------------------------------------~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~ 122 (213)
||+ ++..+...++. .+.|+++..++++..+++++.|..+.
T Consensus 288 WDl~k~~C~kt~l~~S~cnDI~~~~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~-gg~vtSl~ls~~g~~lLsssRDdtl~ 366 (459)
T KOG0288|consen 288 WDLQKAYCSKTVLPGSQCNDIVCSISDVISGHFDKKVRFWDIRSADKTRSVPL-GGRVTSLDLSMDGLELLSSSRDDTLK 366 (459)
T ss_pred hhhhhhheeccccccccccceEecceeeeecccccceEEEeccCCceeeEeec-CcceeeEeeccCCeEEeeecCCCcee
Confidence 555 44444444443 35899999999999999999998875
Q ss_pred ---------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEE
Q psy7433 123 ---------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLH 181 (213)
Q Consensus 123 ---------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 181 (213)
...+.+.|||++.|+++|+.||.|+||++.++++...+...... ..|++++
T Consensus 367 viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~--------~aI~s~~ 438 (459)
T KOG0288|consen 367 VIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSN--------AAITSLS 438 (459)
T ss_pred eeecccccEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEccCceEEEEeccCCCC--------cceEEEE
Confidence 67889999999999999999999999999999999888876532 3699999
Q ss_pred eCCCC-eEEEEecCCcEEEEe
Q psy7433 182 VDGGS-RLFSCGADGSMKVRQ 201 (213)
Q Consensus 182 ~~~~~-~l~s~~~d~~i~iw~ 201 (213)
|+|.+ .|++++.++.+.+|.
T Consensus 439 W~~sG~~Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 439 WNPSGSGLLSADKQKAVTLWT 459 (459)
T ss_pred EcCCCchhhcccCCcceEecC
Confidence 99954 599999999999993
|
|
| >KOG1407|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.9e-24 Score=146.27 Aligned_cols=185 Identities=21% Similarity=0.347 Sum_probs=149.3
Q ss_pred ccccccCceEEEEEeC-CCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEE
Q psy7433 2 TYQCHNKITSDFVFLG-SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDIC 80 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~-~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 80 (213)
..++|++.|-.++|+| +..+|+++ +.|.+|++||. ...++........+ -.-+.|+|+|++++.++.|..|.
T Consensus 59 ~~~gh~~svdql~w~~~~~d~~ata---s~dk~ir~wd~---r~~k~~~~i~~~~e-ni~i~wsp~g~~~~~~~kdD~it 131 (313)
T KOG1407|consen 59 VYRGHTDSVDQLCWDPKHPDLFATA---SGDKTIRIWDI---RSGKCTARIETKGE-NINITWSPDGEYIAVGNKDDRIT 131 (313)
T ss_pred cccCCCcchhhheeCCCCCcceEEe---cCCceEEEEEe---ccCcEEEEeeccCc-ceEEEEcCCCCEEEEecCcccEE
Confidence 4678999999999998 56688888 78999999999 45556655543333 34567899999999998888888
Q ss_pred EEeccCce-----------------------------------------EEEecccCCCCeeEEEecCCCCEEEEecCCC
Q psy7433 81 VIDLRQRV-----------------------------------------IRSRFNAHESPVKCLAIDPHEEFFVTGAGDG 119 (213)
Q Consensus 81 iwd~~~~~-----------------------------------------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~ 119 (213)
+.|.++.+ +++.++.|+..+.|+.|+|+|++|++|+.|.
T Consensus 132 ~id~r~~~~~~~~~~~~e~ne~~w~~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADA 211 (313)
T KOG1407|consen 132 FIDARTYKIVNEEQFKFEVNEISWNNSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADA 211 (313)
T ss_pred EEEecccceeehhcccceeeeeeecCCCCEEEEecCCceEEEEeccccccccccccCCcceEEEEECCCCceEeeccccc
Confidence 88776532 3345667888899999999999999999999
Q ss_pred cee-----------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEe
Q psy7433 120 DIK-----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHV 182 (213)
Q Consensus 120 ~i~-----------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 182 (213)
.+. .+|..++|+.+|++|++|++|..|-|=++++|..+..++.. ++...++|
T Consensus 212 lvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~vetGd~~~eI~~~-----------~~t~tVAW 280 (313)
T KOG1407|consen 212 LVSLWDVDELICERCISRLDWPVRTLSFSHDGRMLASASEDHFIDIAEVETGDRVWEIPCE-----------GPTFTVAW 280 (313)
T ss_pred eeeccChhHhhhheeeccccCceEEEEeccCcceeeccCccceEEeEecccCCeEEEeecc-----------CCceeEEe
Confidence 875 89999999999999999999999999999999999998775 68999999
Q ss_pred CCCCe-EEEEecC---------CcEEEEeCCC
Q psy7433 183 DGGSR-LFSCGAD---------GSMKVRQLPD 204 (213)
Q Consensus 183 ~~~~~-l~s~~~d---------~~i~iw~~~~ 204 (213)
+|... ||-+..| |.+++|-+.+
T Consensus 281 HPk~~LLAyA~ddk~~d~~reag~vKiFG~~~ 312 (313)
T KOG1407|consen 281 HPKRPLLAYACDDKDGDSNREAGTVKIFGLSN 312 (313)
T ss_pred cCCCceeeEEecCCCCccccccceeEEecCCC
Confidence 99764 4444332 5677776543
|
|
| >KOG0264|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.7e-25 Score=159.38 Aligned_cols=188 Identities=24% Similarity=0.401 Sum_probs=153.1
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccc-------cceeeeeeecCCceEEEEecC-CCEEEEEcCC
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKK-------ALVQAFVCHDQGASSLVFAPQ-HQLLISAGKK 76 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~-------~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d 76 (213)
-|.+.|+.++..|+...|++++ +..+.|.|||....... .+-..+.+|...-..+.|++. .-+|++++.|
T Consensus 122 ~h~gEVnRaRymPQnp~iVAt~--t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d 199 (422)
T KOG0264|consen 122 NHDGEVNRARYMPQNPNIVATK--TSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDD 199 (422)
T ss_pred cCCccchhhhhCCCCCcEEEec--CCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCC
Confidence 3788999999999777666554 78999999998432111 223367889888888999984 4589999999
Q ss_pred CcEEEEeccCc-------eEEEecccCCCCeeEEEecC-CCCEEEEecCCCcee-------------------eceEEEE
Q psy7433 77 GDICVIDLRQR-------VIRSRFNAHESPVKCLAIDP-HEEFFVTGAGDGDIK-------------------SPVKCLA 129 (213)
Q Consensus 77 ~~v~iwd~~~~-------~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~i~-------------------~~v~~~~ 129 (213)
+.|++||+... .+...+.+|...|..++|++ +...|++++.|+.+. ..+.|++
T Consensus 200 ~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~ 279 (422)
T KOG0264|consen 200 HTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVA 279 (422)
T ss_pred CcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEE
Confidence 99999999653 34566788999999999999 456788888888764 7899999
Q ss_pred EccCCc-eEEEecCCCcEEEEEccCC-eeeeeecCCCCceeEEEecCCCeEEEEeCCC--CeEEEEecCCcEEEEeCCC
Q psy7433 130 IDPHEE-FFVTGAGDGDIKVWSLSGN-HLLYNFPGEHARSSFFKHIGQGVTQLHVDGG--SRLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 130 ~~~~~~-~l~~~~~dg~i~v~d~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~l~s~~~d~~i~iw~~~~ 204 (213)
|+|-+. .||+|+.|++|.+||+|+. +++.++.+|. ..|.++.|+|+ ..||+++.|+.+.+||+..
T Consensus 280 fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~----------dev~~V~WSPh~etvLASSg~D~rl~vWDls~ 348 (422)
T KOG0264|consen 280 FNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHE----------DEVFQVEWSPHNETVLASSGTDRRLNVWDLSR 348 (422)
T ss_pred eCCCCCceEEeccCCCcEEEeechhcccCceeccCCC----------cceEEEEeCCCCCceeEecccCCcEEEEeccc
Confidence 999655 8899999999999999864 4677777776 78999999995 4699999999999999975
|
|
| >KOG0274|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.3e-25 Score=169.84 Aligned_cols=184 Identities=23% Similarity=0.399 Sum_probs=163.3
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEE
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVI 82 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iw 82 (213)
|.||.+.|+++++..-+.++++| +.|.++++||. .++.+...+.+|.+.+.++... ..++++|+.|.+|++|
T Consensus 245 l~GH~g~V~~l~~~~~~~~lvsg---S~D~t~rvWd~---~sg~C~~~l~gh~stv~~~~~~--~~~~~sgs~D~tVkVW 316 (537)
T KOG0274|consen 245 LVGHFGGVWGLAFPSGGDKLVSG---STDKTERVWDC---STGECTHSLQGHTSSVRCLTID--PFLLVSGSRDNTVKVW 316 (537)
T ss_pred ccCCCCCceeEEEecCCCEEEEE---ecCCcEEeEec---CCCcEEEEecCCCceEEEEEcc--CceEeeccCCceEEEE
Confidence 78999999999998878899999 89999999998 7899999999999999888774 4578889999999999
Q ss_pred eccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCCCc
Q psy7433 83 DLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDGD 145 (213)
Q Consensus 83 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg~ 145 (213)
++.++..+..+.+|..+|.++..+ +..+++|+.|+.++ ..|.++.+.+. ..+++|+.|+.
T Consensus 317 ~v~n~~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~~~~-~~~~Sgs~D~~ 393 (537)
T KOG0274|consen 317 DVTNGACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVYSLIVDSE-NRLLSGSLDTT 393 (537)
T ss_pred eccCcceEEEeccccccEEEEEec--CCEEEEEecCceEEEEEhhhceeeeeecCCcceEEEEEecCc-ceEEeeeeccc
Confidence 999999999999999999999998 88999999999886 78888888765 89999999999
Q ss_pred EEEEEccCC-eeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCccc
Q psy7433 146 IKVWSLSGN-HLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 146 i~v~d~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
|++||+++. +++.++..|. ..+..+.+. ++.|++++.|+.|++||..+++..
T Consensus 394 IkvWdl~~~~~c~~tl~~h~----------~~v~~l~~~-~~~Lvs~~aD~~Ik~WD~~~~~~~ 446 (537)
T KOG0274|consen 394 IKVWDLRTKRKCIHTLQGHT----------SLVSSLLLR-DNFLVSSSADGTIKLWDAEEGECL 446 (537)
T ss_pred eEeecCCchhhhhhhhcCCc----------ccccccccc-cceeEeccccccEEEeecccCcee
Confidence 999999999 9999999886 445544443 567999999999999999987543
|
|
| >KOG0772|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.3e-25 Score=163.44 Aligned_cols=186 Identities=15% Similarity=0.196 Sum_probs=149.8
Q ss_pred cccccCceEEEEEeCC-CCeEEEeeccCCCccEEEEeCCCcccccceeeee-----eecCCceEEEEecCCCEEEEEcCC
Q psy7433 3 YQCHNKITSDFVFLGS-CSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV-----CHDQGASSLVFAPQHQLLISAGKK 76 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~-~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d 76 (213)
-+||...++|-+|+|. ...|+|+ +.||+++|||+++... ....++ +..-+++.++|+++++.||+|..|
T Consensus 264 TKGHia~lt~g~whP~~k~~FlT~---s~DgtlRiWdv~~~k~--q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~D 338 (641)
T KOG0772|consen 264 TKGHIAELTCGCWHPDNKEEFLTC---SYDGTLRIWDVNNTKS--QLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLD 338 (641)
T ss_pred cCCceeeeeccccccCcccceEEe---cCCCcEEEEecCCchh--heeEEeeccCCCcccCceeeecCCCcchhhhcccC
Confidence 4789999999999995 4578888 7999999999964332 222222 233478999999999999999999
Q ss_pred CcEEEEeccCc--eEEEec-ccCCC--CeeEEEecCCCCEEEEecCCCcee--------------------eceEEEEEc
Q psy7433 77 GDICVIDLRQR--VIRSRF-NAHES--PVKCLAIDPHEEFFVTGAGDGDIK--------------------SPVKCLAID 131 (213)
Q Consensus 77 ~~v~iwd~~~~--~~~~~~-~~~~~--~i~~~~~~~~~~~l~~~~~~~~i~--------------------~~v~~~~~~ 131 (213)
|.|.+|+.... .+...+ ..|.. .|+|+.|+++|++|++-+.|..++ .+-+.++||
T Consensus 339 GSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkpL~~~tgL~t~~~~tdc~FS 418 (641)
T KOG0772|consen 339 GSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKKPLNVRTGLPTPFPGTDCCFS 418 (641)
T ss_pred CceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccccccchhhhcCCCccCCCCccccC
Confidence 99999998553 222222 34555 899999999999999999999987 566789999
Q ss_pred cCCceEEEecC------CCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCC-CeEEEEecCCcEEEEeCC
Q psy7433 132 PHEEFFVTGAG------DGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG-SRLFSCGADGSMKVRQLP 203 (213)
Q Consensus 132 ~~~~~l~~~~~------dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~d~~i~iw~~~ 203 (213)
|+.++|++|+. .|.+.+||..+...++.+.... ..|..+.|+|- +++.+++.||.+++|--.
T Consensus 419 Pd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~~----------aSvv~~~WhpkLNQi~~gsgdG~~~vyYdp 487 (641)
T KOG0772|consen 419 PDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDIST----------ASVVRCLWHPKLNQIFAGSGDGTAHVYYDP 487 (641)
T ss_pred CCceEEEecccccCCCCCceEEEEeccceeeEEEecCCC----------ceEEEEeecchhhheeeecCCCceEEEECc
Confidence 99999999954 4789999999999998887764 67999999993 678889999999987433
|
|
| >KOG0269|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.8e-26 Score=173.36 Aligned_cols=190 Identities=24% Similarity=0.428 Sum_probs=155.8
Q ss_pred ccccccCceEEEEEeCCCC-eEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec-CCCEEEEEcCCCcE
Q psy7433 2 TYQCHNKITSDFVFLGSCS-LVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP-QHQLLISAGKKGDI 79 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~-~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v 79 (213)
.|..|+..+.+++|++... +|++| +.||.|++||++ ..+...++.+....|+.++|+| .+++++++.+.|.+
T Consensus 128 ~f~EH~Rs~~~ldfh~tep~iliSG---SQDg~vK~~DlR---~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~l 201 (839)
T KOG0269|consen 128 VFNEHERSANKLDFHSTEPNILISG---SQDGTVKCWDLR---SKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYL 201 (839)
T ss_pred HhhhhccceeeeeeccCCccEEEec---CCCceEEEEeee---cccccccccccchhhhceeeccCCCceEEEecCCceE
Confidence 5788999999999999554 56666 899999999995 4445556666788999999999 67899999999999
Q ss_pred EEEeccCc-eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee------------------eceEEEEEccCCce-EEE
Q psy7433 80 CVIDLRQR-VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------SPVKCLAIDPHEEF-FVT 139 (213)
Q Consensus 80 ~iwd~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------~~v~~~~~~~~~~~-l~~ 139 (213)
++||++.. ++..++..|.+++.|+.|+|+..+||+|+.|+.++ .++.++.|-|..++ |++
T Consensus 202 qlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~~~tInTiapv~rVkWRP~~~~hLAt 281 (839)
T KOG0269|consen 202 QLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAKPKHTINTIAPVGRVKWRPARSYHLAT 281 (839)
T ss_pred EEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCCccceeEEeecceeeeeeeccCccchhhh
Confidence 99999876 56677889999999999999999999999999997 89999999998774 555
Q ss_pred ec--CCCcEEEEEccC-CeeeeeecCCCCceeEEEecCCCeEEEEeCCC--CeEEEEecCCcEEEEeCCCCcc
Q psy7433 140 GA--GDGDIKVWSLSG-NHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG--SRLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 140 ~~--~dg~i~v~d~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~l~s~~~d~~i~iw~~~~~~~ 207 (213)
++ .|..|+|||++- .-+..++..|. ..++.++|... ..+.+++.||.|..-.+++...
T Consensus 282 csmv~dtsV~VWDvrRPYIP~~t~~eH~----------~~vt~i~W~~~d~~~l~s~sKD~tv~qh~~knat~ 344 (839)
T KOG0269|consen 282 CSMVVDTSVHVWDVRRPYIPYATFLEHT----------DSVTGIAWDSGDRINLWSCSKDGTVLQHLFKNATT 344 (839)
T ss_pred hhccccceEEEEeeccccccceeeeccC----------ccccceeccCCCceeeEeecCccHHHHhhhhcccC
Confidence 54 367899999964 44555666665 78999999763 3488999999887666555443
|
|
| >KOG0646|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-24 Score=158.41 Aligned_cols=196 Identities=20% Similarity=0.243 Sum_probs=160.6
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEecc-
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLR- 85 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~- 85 (213)
.++|.|++-+|+|.+|+.+ ...+.|++|.+ .++..+..+.+|-..|+++.|+-|+.+|++|+.||.|.+|.+.
T Consensus 81 Pg~v~al~s~n~G~~l~ag---~i~g~lYlWel---ssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~ 154 (476)
T KOG0646|consen 81 PGPVHALASSNLGYFLLAG---TISGNLYLWEL---SSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTD 154 (476)
T ss_pred ccceeeeecCCCceEEEee---cccCcEEEEEe---ccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEe
Confidence 4679999999999999998 58999999999 7888888889999999999999999999999999999999873
Q ss_pred --------CceEEEecccCCCCeeEEEecCC--CCEEEEecCCCcee----------------eceEEEEEccCCceEEE
Q psy7433 86 --------QRVIRSRFNAHESPVKCLAIDPH--EEFFVTGAGDGDIK----------------SPVKCLAIDPHEEFFVT 139 (213)
Q Consensus 86 --------~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~~~~i~----------------~~v~~~~~~~~~~~l~~ 139 (213)
+.++++.+..|.-+|+.+...+- ..++++++.|.+++ ..+.+++.+|.++.+.+
T Consensus 155 lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~fp~si~av~lDpae~~~yi 234 (476)
T KOG0646|consen 155 LVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTITFPSSIKAVALDPAERVVYI 234 (476)
T ss_pred ecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEecCCcceeEEEcccccEEEe
Confidence 23678888999999999998774 45899999999987 78999999999999999
Q ss_pred ecCCCcEEEEEccCCe--ee----eeecCCCCceeEEEecCC--CeEEEEeCCCC-eEEEEecCCcEEEEeCCCCccc
Q psy7433 140 GAGDGDIKVWSLSGNH--LL----YNFPGEHARSSFFKHIGQ--GVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 140 ~~~dg~i~v~d~~~~~--~~----~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
|+.+|.|.+.++.+.. .. .....+......+..+.. .|+|++.+-|+ .|++|+.||.|+|||+.+.+.+
T Consensus 235 Gt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~S~Q~i 312 (476)
T KOG0646|consen 235 GTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWDIYSKQCI 312 (476)
T ss_pred cCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEecchHHHH
Confidence 9999999998884322 11 111111111122223334 89999999765 5899999999999999987543
|
|
| >KOG0305|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-24 Score=163.68 Aligned_cols=187 Identities=21% Similarity=0.318 Sum_probs=160.5
Q ss_pred cccc-ccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEE
Q psy7433 2 TYQC-HNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDIC 80 (213)
Q Consensus 2 ~l~~-h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 80 (213)
++.+ |...|-+++|+ +..+.+| +.++.|..+|++.. ......+++|...|..++|+++++++|+|+.|+.+.
T Consensus 254 ~~~~~h~~rvg~laW~--~~~lssG---sr~~~I~~~dvR~~--~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~ 326 (484)
T KOG0305|consen 254 TLRGSHASRVGSLAWN--SSVLSSG---SRDGKILNHDVRIS--QHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVF 326 (484)
T ss_pred cccCCcCceeEEEecc--CceEEEe---cCCCcEEEEEEecc--hhhhhhhhcccceeeeeEECCCCCeeccCCCccceE
Confidence 3556 89999999998 5566666 79999999999633 223335888999999999999999999999999999
Q ss_pred EEeccCceEEEecccCCCCeeEEEecC-CCCEEEEecC--CCcee----------------eceEEEEEccCCceEEEe-
Q psy7433 81 VIDLRQRVIRSRFNAHESPVKCLAIDP-HEEFFVTGAG--DGDIK----------------SPVKCLAIDPHEEFFVTG- 140 (213)
Q Consensus 81 iwd~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~--~~~i~----------------~~v~~~~~~~~~~~l~~~- 140 (213)
|||....+++..+..|...|.+++|+| +...||+|+. |+.++ ..|..+.|++..+-|+++
T Consensus 327 Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdtgsQVcsL~Wsk~~kEi~sth 406 (484)
T KOG0305|consen 327 IWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDTGSQVCSLIWSKKYKELLSTH 406 (484)
T ss_pred eccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEecccccCCceeeEEEcCCCCEEEEec
Confidence 999988899999999999999999999 5668888754 66676 899999999998755554
Q ss_pred -cCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCC
Q psy7433 141 -AGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 141 -~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~ 205 (213)
..++.|.||+..+.+.+..+.+|. ..|..++++|++ .+++++.|.++++|++-+.
T Consensus 407 G~s~n~i~lw~~ps~~~~~~l~gH~----------~RVl~la~SPdg~~i~t~a~DETlrfw~~f~~ 463 (484)
T KOG0305|consen 407 GYSENQITLWKYPSMKLVAELLGHT----------SRVLYLALSPDGETIVTGAADETLRFWNLFDE 463 (484)
T ss_pred CCCCCcEEEEeccccceeeeecCCc----------ceeEEEEECCCCCEEEEecccCcEEeccccCC
Confidence 456789999999999999999997 789999999975 6999999999999999874
|
|
| >KOG0641|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-23 Score=140.26 Aligned_cols=188 Identities=20% Similarity=0.306 Sum_probs=159.2
Q ss_pred ccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccc--cceeeeeeecCCceEEEEec----CCCEEEEEc-CC
Q psy7433 4 QCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKK--ALVQAFVCHDQGASSLVFAP----QHQLLISAG-KK 76 (213)
Q Consensus 4 ~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~--~~~~~~~~~~~~v~~~~~~~----~~~~l~~~~-~d 76 (213)
+.|.+.|+|.+|+|+|.+||++ ++|.+|++.-++..... ..-..+.-|.+.|..++|.. .+.+|++++ .|
T Consensus 86 khhkgsiyc~~ws~~geliatg---sndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagd 162 (350)
T KOG0641|consen 86 KHHKGSIYCTAWSPCGELIATG---SNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGD 162 (350)
T ss_pred cccCccEEEEEecCccCeEEec---CCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCc
Confidence 4688999999999999999999 89999999987532111 12334667999999999964 245677654 57
Q ss_pred CcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee------------------------eceEEEEEcc
Q psy7433 77 GDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------------SPVKCLAIDP 132 (213)
Q Consensus 77 ~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------------~~v~~~~~~~ 132 (213)
..|++-|..+++..+.+.+|.+-|.++ ++-++-.|++|+.|.+++ ..|.+++..|
T Consensus 163 c~iy~tdc~~g~~~~a~sghtghilal-yswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdp 241 (350)
T KOG0641|consen 163 CKIYITDCGRGQGFHALSGHTGHILAL-YSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDP 241 (350)
T ss_pred ceEEEeecCCCCcceeecCCcccEEEE-EEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECC
Confidence 788888999999999999999988776 233588999999999987 7899999999
Q ss_pred CCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCC
Q psy7433 133 HEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 133 ~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~ 205 (213)
.|++|++|-.|....+||++.++.++.+..|. ..|.++.|+|+. ++++++.|.+|++-|+...
T Consensus 242 sgrll~sg~~dssc~lydirg~r~iq~f~phs----------adir~vrfsp~a~yllt~syd~~ikltdlqgd 305 (350)
T KOG0641|consen 242 SGRLLASGHADSSCMLYDIRGGRMIQRFHPHS----------ADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGD 305 (350)
T ss_pred CcceeeeccCCCceEEEEeeCCceeeeeCCCc----------cceeEEEeCCCceEEEEecccceEEEeecccc
Confidence 99999999999999999999999999998886 789999999975 5999999999999998754
|
|
| >KOG0267|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.8e-26 Score=173.46 Aligned_cols=187 Identities=24% Similarity=0.401 Sum_probs=169.4
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEE
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVI 82 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iw 82 (213)
+-+|...|.++..-..++.+++| ..+..+-+|.. .+...+..+.+|..+|.++.|++...+|++|+.+|+|++|
T Consensus 24 ~~~hsaav~~lk~~~s~r~~~~G---g~~~k~~L~~i---~kp~~i~S~~~hespIeSl~f~~~E~LlaagsasgtiK~w 97 (825)
T KOG0267|consen 24 FVAHSAAVGCLKIRKSSRSLVTG---GEDEKVNLWAI---GKPNAITSLTGHESPIESLTFDTSERLLAAGSASGTIKVW 97 (825)
T ss_pred hhhhhhhhceeeeeccceeeccC---CCceeeccccc---cCCchhheeeccCCcceeeecCcchhhhcccccCCceeee
Confidence 34688889999887788999999 47999999998 5566677799999999999999999999999999999999
Q ss_pred eccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCCCc
Q psy7433 83 DLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDGD 145 (213)
Q Consensus 83 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg~ 145 (213)
|++..+.++.+.+|...+..+.|+|-+.+++.++.|..++ ..+..+.|+|+|++++.|++|..
T Consensus 98 DleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~t 177 (825)
T KOG0267|consen 98 DLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNT 177 (825)
T ss_pred ehhhhhhhhhhhccccCcceeeeccceEEeccccccccceehhhhccCceeeecCCcceeEEEeecCCCceeeccCCcce
Confidence 9999999999999999999999999999999999988765 45888999999999999999999
Q ss_pred EEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEecCCcEEEEeCCCC
Q psy7433 146 IKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 146 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~d~~i~iw~~~~~ 205 (213)
++|||+..++....+..|. +.+..+.++|.+. +++|+.|+.+++||+.+-
T Consensus 178 vki~d~~agk~~~ef~~~e----------~~v~sle~hp~e~Lla~Gs~d~tv~f~dletf 228 (825)
T KOG0267|consen 178 VKIWDLTAGKLSKEFKSHE----------GKVQSLEFHPLEVLLAPGSSDRTVRFWDLETF 228 (825)
T ss_pred eeeeccccccccccccccc----------ccccccccCchhhhhccCCCCceeeeecccee
Confidence 9999999999999999887 7899999999665 889999999999999854
|
|
| >KOG0268|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.1e-25 Score=156.52 Aligned_cols=188 Identities=16% Similarity=0.235 Sum_probs=143.9
Q ss_pred ccccccCceEEEEEeCCC-CeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEE
Q psy7433 2 TYQCHNKITSDFVFLGSC-SLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDIC 80 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~-~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 80 (213)
.|.||...|.|++=+|.. ..+++| +.||.|+|||+ .+..++..+++|.+.|..+++.. ..++++++|.+|+
T Consensus 61 ~L~gHrdGV~~lakhp~~ls~~aSG---s~DG~VkiWnl---sqR~~~~~f~AH~G~V~Gi~v~~--~~~~tvgdDKtvK 132 (433)
T KOG0268|consen 61 SLDGHRDGVSCLAKHPNKLSTVASG---SCDGEVKIWNL---SQRECIRTFKAHEGLVRGICVTQ--TSFFTVGDDKTVK 132 (433)
T ss_pred hccccccccchhhcCcchhhhhhcc---ccCceEEEEeh---hhhhhhheeecccCceeeEEecc--cceEEecCCccee
Confidence 468999999999999977 778888 89999999999 78889999999999999999976 5688888888888
Q ss_pred EEecc--------------------------------------CceEEEecccCCCCeeEEEecCC-CCEEEEecCCCce
Q psy7433 81 VIDLR--------------------------------------QRVIRSRFNAHESPVKCLAIDPH-EEFFVTGAGDGDI 121 (213)
Q Consensus 81 iwd~~--------------------------------------~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~~~~i 121 (213)
.|-+. ...+++.+.-..+.|.++.|+|- ...|++|..|+.+
T Consensus 133 ~wk~~~~p~~tilg~s~~~gIdh~~~~~~FaTcGe~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsI 212 (433)
T KOG0268|consen 133 QWKIDGPPLHTILGKSVYLGIDHHRKNSVFATCGEQIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSI 212 (433)
T ss_pred eeeccCCcceeeeccccccccccccccccccccCceeeecccccCCccceeecCCCceeEEecCCCcchheeeeccCCce
Confidence 77632 11233333333445667777773 3456666666665
Q ss_pred e-----------------------------------------------------------eceEEEEEccCCceEEEecC
Q psy7433 122 K-----------------------------------------------------------SPVKCLAIDPHEEFFVTGAG 142 (213)
Q Consensus 122 ~-----------------------------------------------------------~~v~~~~~~~~~~~l~~~~~ 142 (213)
. +.|.+++|+|.|+-+++|+.
T Consensus 213 vLyD~R~~~Pl~KVi~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~Efvsgsy 292 (433)
T KOG0268|consen 213 VLYDLRQASPLKKVILTMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSY 292 (433)
T ss_pred EEEecccCCccceeeeeccccceecCccccceeeccccccceehhhhhhcccchhhcccceeEEEeccCCCcchhccccc
Confidence 3 68899999999999999999
Q ss_pred CCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCC-CeEEEEecCCcEEEEeCCCCc
Q psy7433 143 DGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG-SRLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 143 dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~d~~i~iw~~~~~~ 206 (213)
|.+|+||..+.+.....+.... -+.|.++.|+-| .++++||.|+.|++|.....+
T Consensus 293 DksIRIf~~~~~~SRdiYhtkR---------Mq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~Ase 348 (433)
T KOG0268|consen 293 DKSIRIFPVNHGHSRDIYHTKR---------MQHVFCVKYSMDSKYIISGSDDGNVRLWKAKASE 348 (433)
T ss_pred cceEEEeecCCCcchhhhhHhh---------hheeeEEEEeccccEEEecCCCcceeeeecchhh
Confidence 9999999987665443332211 157999999976 469999999999999876543
|
|
| >KOG0316|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.5e-24 Score=141.96 Aligned_cols=185 Identities=15% Similarity=0.219 Sum_probs=152.0
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
++.+|...|..++.+.|...|+++| .|..|.+||+ .+++.++.+.+|.+.|+.++|+.+...+++|+.|..+++
T Consensus 54 tYsghG~EVlD~~~s~Dnskf~s~G---gDk~v~vwDV---~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~ 127 (307)
T KOG0316|consen 54 TYSGHGHEVLDAALSSDNSKFASCG---GDKAVQVWDV---NTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRL 127 (307)
T ss_pred eecCCCceeeeccccccccccccCC---CCceEEEEEc---ccCeeeeecccccceeeEEEecCcceEEEeccccceeEE
Confidence 6789999999999999999999994 8999999999 789999999999999999999999999999999999999
Q ss_pred EeccCc--eEEEecc--------------------------------------cCCCCeeEEEecCCCCEEEEecCCCce
Q psy7433 82 IDLRQR--VIRSRFN--------------------------------------AHESPVKCLAIDPHEEFFVTGAGDGDI 121 (213)
Q Consensus 82 wd~~~~--~~~~~~~--------------------------------------~~~~~i~~~~~~~~~~~l~~~~~~~~i 121 (213)
||.++. ++++.+. ....+|++++|+++++..++++.++++
T Consensus 128 wDCRS~s~ePiQildea~D~V~Si~v~~heIvaGS~DGtvRtydiR~G~l~sDy~g~pit~vs~s~d~nc~La~~l~stl 207 (307)
T KOG0316|consen 128 WDCRSRSFEPIQILDEAKDGVSSIDVAEHEIVAGSVDGTVRTYDIRKGTLSSDYFGHPITSVSFSKDGNCSLASSLDSTL 207 (307)
T ss_pred EEcccCCCCccchhhhhcCceeEEEecccEEEeeccCCcEEEEEeecceeehhhcCCcceeEEecCCCCEEEEeecccee
Confidence 999764 3333221 124689999999999999999999998
Q ss_pred e-------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEe
Q psy7433 122 K-------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHV 182 (213)
Q Consensus 122 ~-------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 182 (213)
+ .-=...+++.....+++|++||.+.+||+.....+..++.+.. --++.+.+
T Consensus 208 rLlDk~tGklL~sYkGhkn~eykldc~l~qsdthV~sgSEDG~Vy~wdLvd~~~~sk~~~~~~---------v~v~dl~~ 278 (307)
T KOG0316|consen 208 RLLDKETGKLLKSYKGHKNMEYKLDCCLNQSDTHVFSGSEDGKVYFWDLVDETQISKLSVVST---------VIVTDLSC 278 (307)
T ss_pred eecccchhHHHHHhcccccceeeeeeeecccceeEEeccCCceEEEEEeccceeeeeeccCCc---------eeEEeeec
Confidence 7 2334456777777999999999999999999999999887752 23889999
Q ss_pred CCC-CeEEEEecCCcEEEEeC
Q psy7433 183 DGG-SRLFSCGADGSMKVRQL 202 (213)
Q Consensus 183 ~~~-~~l~s~~~d~~i~iw~~ 202 (213)
+|. ..|+++. ++.+.+|.-
T Consensus 279 hp~~~~f~~A~-~~~~~~~~~ 298 (307)
T KOG0316|consen 279 HPTMDDFITAT-GHGDLFWYQ 298 (307)
T ss_pred ccCccceeEec-CCceeceee
Confidence 984 3354443 334555543
|
|
| >KOG0308|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-24 Score=163.87 Aligned_cols=190 Identities=19% Similarity=0.395 Sum_probs=167.4
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEE-ecCCCEEEEEcCCCcEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVF-APQHQLLISAGKKGDIC 80 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~l~~~~~d~~v~ 80 (213)
+++.|...|+++....+++.|+++ |.|.+|++|+..... .-++.++..|...|.|++. -++...+++|+-|+.|.
T Consensus 68 sme~HsDWVNDiiL~~~~~tlIS~---SsDtTVK~W~~~~~~-~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~If 143 (735)
T KOG0308|consen 68 SMEHHSDWVNDIILCGNGKTLISA---SSDTTVKVWNAHKDN-TFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIF 143 (735)
T ss_pred hhhhhHhHHhhHHhhcCCCceEEe---cCCceEEEeecccCc-chhHhhhhcccchheeeeecccCceeEEecCCCccEE
Confidence 578899999999999999999999 899999999985322 3678888899999999999 77888999999999999
Q ss_pred EEeccCce--EEEe--------cc-cCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEcc
Q psy7433 81 VIDLRQRV--IRSR--------FN-AHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDP 132 (213)
Q Consensus 81 iwd~~~~~--~~~~--------~~-~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~ 132 (213)
+||+.++. .+.. +. ++..+|.+++.++.+..++.|+..+.++ ..|.++..++
T Consensus 144 lWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~d 223 (735)
T KOG0308|consen 144 LWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVND 223 (735)
T ss_pred EEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcccceEEeccccccceeeeeccccceEEEEEcC
Confidence 99999772 2222 22 5677899999999999999999988776 7899999999
Q ss_pred CCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCC-CeEEEEecCCcEEEEeCCCC
Q psy7433 133 HEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG-SRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 133 ~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~d~~i~iw~~~~~ 205 (213)
||..+++++.||+|++||+...+++.++..|. ..|.++..+|+ ..+++|+.||.|..=|+++.
T Consensus 224 DGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~----------e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~ 287 (735)
T KOG0308|consen 224 DGTRLLSASSDGTIRLWDLGQQRCLATYIVHK----------EGVWALQSSPSFTHVYSGGRDGNIYRTDLRNP 287 (735)
T ss_pred CCCeEeecCCCceEEeeeccccceeeeEEecc----------CceEEEeeCCCcceEEecCCCCcEEecccCCc
Confidence 99999999999999999999999999999987 56999999986 46999999999999999885
|
|
| >KOG0308|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.5e-25 Score=165.98 Aligned_cols=179 Identities=20% Similarity=0.372 Sum_probs=158.2
Q ss_pred CCCCeEEEeeccCCCccEEEEeCCCccc---ccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCc--eEEE
Q psy7433 17 GSCSLVATAGHSSESKNVCLWDSLLPQK---KALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR--VIRS 91 (213)
Q Consensus 17 ~~~~~l~~~g~~s~~~~i~iwd~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~--~~~~ 91 (213)
|++++|.++ +.||.|++|++..... ...+..++.|...|+.+....+++.|++++.|-+|++|+...+ -++.
T Consensus 35 ~~~ryLfTg---GRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~~~c~s 111 (735)
T KOG0308|consen 35 PNGRYLFTG---GRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDNTFCMS 111 (735)
T ss_pred CCCceEEec---CCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCcchhHh
Confidence 477789999 5999999999854322 2246778889999999999999999999999999999999876 5667
Q ss_pred ecccCCCCeeEEEe-cCCCCEEEEecCCCcee----------------------------eceEEEEEccCCceEEEecC
Q psy7433 92 RFNAHESPVKCLAI-DPHEEFFVTGAGDGDIK----------------------------SPVKCLAIDPHEEFFVTGAG 142 (213)
Q Consensus 92 ~~~~~~~~i~~~~~-~~~~~~l~~~~~~~~i~----------------------------~~v~~~~~~~~~~~l~~~~~ 142 (213)
.+..|.+.|.|++. -++...+++|+.|+.|. .+|.+++.++.|..+++|+.
T Consensus 112 tir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgt 191 (735)
T KOG0308|consen 112 TIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGT 191 (735)
T ss_pred hhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCc
Confidence 78889999999999 77888999999999886 67899999999999999999
Q ss_pred CCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCccc
Q psy7433 143 DGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 143 dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
++.+++||.++++.+..+.+|. .-|..+..++++ ++++++.||+|++||+..++++
T Consensus 192 ek~lr~wDprt~~kimkLrGHT----------dNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl 248 (735)
T KOG0308|consen 192 EKDLRLWDPRTCKKIMKLRGHT----------DNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCL 248 (735)
T ss_pred ccceEEeccccccceeeeeccc----------cceEEEEEcCCCCeEeecCCCceEEeeecccccee
Confidence 9999999999999999999997 679999999876 6999999999999999987654
|
|
| >KOG4283|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.3e-24 Score=146.32 Aligned_cols=203 Identities=17% Similarity=0.238 Sum_probs=160.0
Q ss_pred ccccCceEEEEEeC-CCCeEEEeeccCCCccEEEEeCCCcccc---------cce---eeeeeecCCceEEEEec-CCCE
Q psy7433 4 QCHNKITSDFVFLG-SCSLVATAGHSSESKNVCLWDSLLPQKK---------ALV---QAFVCHDQGASSLVFAP-QHQL 69 (213)
Q Consensus 4 ~~h~~~v~~~~~~~-~~~~l~~~g~~s~~~~i~iwd~~~~~~~---------~~~---~~~~~~~~~v~~~~~~~-~~~~ 69 (213)
+.|.+.|+++.+.+ .|+++++| ..||.|.+||+++.... +++ ..-.+|.-.|..+.|.| |...
T Consensus 40 r~HgGsvNsL~id~tegrymlSG---gadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGm 116 (397)
T KOG4283|consen 40 RPHGGSVNSLQIDLTEGRYMLSG---GADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGM 116 (397)
T ss_pred ccCCCccceeeeccccceEEeec---CCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCce
Confidence 46899999999998 78999999 58999999999643211 111 01124667899999999 6668
Q ss_pred EEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCC---CCEEEEecCCCcee-----------------eceEEEE
Q psy7433 70 LISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPH---EEFFVTGAGDGDIK-----------------SPVKCLA 129 (213)
Q Consensus 70 l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~~~~i~-----------------~~v~~~~ 129 (213)
+.+++.|.++++||..+.+....|+ ..+.|..-+++|- ...+++|..+-.++ ..|.++.
T Consensus 117 FtssSFDhtlKVWDtnTlQ~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~ 195 (397)
T KOG4283|consen 117 FTSSSFDHTLKVWDTNTLQEAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVE 195 (397)
T ss_pred eecccccceEEEeecccceeeEEee-cCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEE
Confidence 8899999999999999988877776 5677888888883 44677777777776 7899999
Q ss_pred EccCCc-eEEEecCCCcEEEEEccCC-eeeeeecCCCCcee----EEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeC
Q psy7433 130 IDPHEE-FFVTGAGDGDIKVWSLSGN-HLLYNFPGEHARSS----FFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQL 202 (213)
Q Consensus 130 ~~~~~~-~l~~~~~dg~i~v~d~~~~-~~~~~~~~~~~~~~----~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~ 202 (213)
|+|... .|++|+.||.|++||+|.. .+...+..|..... ....+.+.+.+++|..++ ++++++.|..+++|+.
T Consensus 196 Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~ 275 (397)
T KOG4283|consen 196 WSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNM 275 (397)
T ss_pred eccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccceEEeec
Confidence 999888 5889999999999999754 66667766652111 134566899999998765 5999999999999999
Q ss_pred CCCccccc
Q psy7433 203 PDRDAVVH 210 (213)
Q Consensus 203 ~~~~~~~~ 210 (213)
.+++.-++
T Consensus 276 ~~G~ntl~ 283 (397)
T KOG4283|consen 276 ESGRNTLR 283 (397)
T ss_pred ccCccccc
Confidence 98876543
|
|
| >KOG0274|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-23 Score=162.99 Aligned_cols=179 Identities=28% Similarity=0.469 Sum_probs=158.9
Q ss_pred ccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceee-eeeecCCceEEEEecCCCEEEEEcCCCcEEEEec
Q psy7433 6 HNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQA-FVCHDQGASSLVFAPQHQLLISAGKKGDICVIDL 84 (213)
Q Consensus 6 h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~ 84 (213)
|...+.+..|. +.+++++ +.+.+|++||. .+...+.. +.+|.+.|.++++..-+.+|++|+.|.++++||.
T Consensus 207 ~~~~~~~~q~~--~~~~~~~---s~~~tl~~~~~---~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~ 278 (537)
T KOG0274|consen 207 DDHVVLCLQLH--DGFFKSG---SDDSTLHLWDL---NNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDC 278 (537)
T ss_pred Ccchhhhheee--cCeEEec---CCCceeEEeec---ccceEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEec
Confidence 45567777777 5577777 79999999998 56666666 9999999999999877889999999999999999
Q ss_pred cCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCCCcEE
Q psy7433 85 RQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDGDIK 147 (213)
Q Consensus 85 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg~i~ 147 (213)
.++++...+.+|...+.++... ...+++|+.|.+++ .+|.++..+ +.++++|+.|+.|+
T Consensus 279 ~sg~C~~~l~gh~stv~~~~~~--~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~ 354 (537)
T KOG0274|consen 279 STGECTHSLQGHTSSVRCLTID--PFLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVK 354 (537)
T ss_pred CCCcEEEEecCCCceEEEEEcc--CceEeeccCCceEEEEeccCcceEEEeccccccEEEEEec--CCEEEEEecCceEE
Confidence 9999999999999999999876 45677889999887 788899888 78999999999999
Q ss_pred EEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCc
Q psy7433 148 VWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 148 v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~ 206 (213)
+||+.+++++.++.+|. ..|+++.+.+..++++|+.|+.|++||+.+..
T Consensus 355 VW~~~~~~cl~sl~gH~----------~~V~sl~~~~~~~~~Sgs~D~~IkvWdl~~~~ 403 (537)
T KOG0274|consen 355 VWDPRTGKCLKSLSGHT----------GRVYSLIVDSENRLLSGSLDTTIKVWDLRTKR 403 (537)
T ss_pred EEEhhhceeeeeecCCc----------ceEEEEEecCcceEEeeeeccceEeecCCchh
Confidence 99999999999999987 78999988865789999999999999999883
|
|
| >KOG0288|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.6e-25 Score=158.45 Aligned_cols=196 Identities=19% Similarity=0.287 Sum_probs=166.6
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
.+..|.+.|..+.|-++...|+++| .|..|++|++.. .+...+.++.+..++++.+.|.++++.+++.+.|+.+++
T Consensus 170 ~ld~h~gev~~v~~l~~sdtlatgg---~Dr~Ik~W~v~~-~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~ 245 (459)
T KOG0288|consen 170 VLDAHEGEVHDVEFLRNSDTLATGG---SDRIIKLWNVLG-EKSELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRL 245 (459)
T ss_pred hhhccccccceeEEccCcchhhhcc---hhhhhhhhhccc-chhhhhhhhhccCCCcceeeecCCCceEEeecCCCceee
Confidence 3678999999999999999999994 899999999842 234567778888899999999999999999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee---------------------------------------
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK--------------------------------------- 122 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~--------------------------------------- 122 (213)
|++.+.+...++.+|.+.|+++.|......+++++.|.+++
T Consensus 246 Wnvd~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~~S~cnDI~~~~~~~~SgH~DkkvR 325 (459)
T KOG0288|consen 246 WNVDSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVLPGSQCNDIVCSISDVISGHFDKKVR 325 (459)
T ss_pred eeccchhhhhhhcccccceeeehhhccccceeeccccchhhhhhhhhhheeccccccccccceEecceeeeecccccceE
Confidence 99999999999999999999999988777788999998886
Q ss_pred ----------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC
Q psy7433 123 ----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS 186 (213)
Q Consensus 123 ----------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 186 (213)
+.|+++..++++..+++.+.|..+.+.|+++.+....+....... +...+.+.|+|++
T Consensus 326 fwD~Rs~~~~~sv~~gg~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~------asDwtrvvfSpd~ 399 (459)
T KOG0288|consen 326 FWDIRSADKTRSVPLGGRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKC------ASDWTRVVFSPDG 399 (459)
T ss_pred EEeccCCceeeEeecCcceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeecccccc------ccccceeEECCCC
Confidence 677888888888888888888888888888877777776644221 2458889999965
Q ss_pred -eEEEEecCCcEEEEeCCCCcc
Q psy7433 187 -RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 187 -~l~s~~~d~~i~iw~~~~~~~ 207 (213)
++++|+.||.|+||++.+++.
T Consensus 400 ~YvaAGS~dgsv~iW~v~tgKl 421 (459)
T KOG0288|consen 400 SYVAAGSADGSVYIWSVFTGKL 421 (459)
T ss_pred ceeeeccCCCcEEEEEccCceE
Confidence 699999999999999998854
|
|
| >KOG0973|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-23 Score=165.60 Aligned_cols=202 Identities=16% Similarity=0.188 Sum_probs=159.1
Q ss_pred ccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCc--------c-cccceeeeeeecCCceEEEEecCCCEEEEEcCC
Q psy7433 6 HNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLP--------Q-KKALVQAFVCHDQGASSLVFAPQHQLLISAGKK 76 (213)
Q Consensus 6 h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~--------~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 76 (213)
++..|.+++.+|++..+||||+ -.|+.++||+.+.- . -.+.+.....|.+.|+|+.|+|||++||+|++|
T Consensus 12 ~~~~IfSIdv~pdg~~~aTgGq-~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD 90 (942)
T KOG0973|consen 12 NEKSIFSIDVHPDGVKFATGGQ-VLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDD 90 (942)
T ss_pred CCeeEEEEEecCCceeEecCCc-cccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCc
Confidence 4567999999999999999965 46888889986321 1 134455666799999999999999999999999
Q ss_pred CcEEEEeccC------------------ceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee----------------
Q psy7433 77 GDICVIDLRQ------------------RVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK---------------- 122 (213)
Q Consensus 77 ~~v~iwd~~~------------------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~---------------- 122 (213)
+.|.+|+... .+.+..+.+|...|..+.|+|++.+|++++.|+.+.
T Consensus 91 ~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~vl~~H 170 (942)
T KOG0973|consen 91 RLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLKVLRGH 170 (942)
T ss_pred ceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccceeeeeeecc
Confidence 9999998762 135667888999999999999999999999999886
Q ss_pred -eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeec----------------------------------------
Q psy7433 123 -SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFP---------------------------------------- 161 (213)
Q Consensus 123 -~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~---------------------------------------- 161 (213)
..|..+.|+|-|+||++-+.|++|+||++.+-.....+.
T Consensus 171 ~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~Ii 250 (942)
T KOG0973|consen 171 QSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAII 250 (942)
T ss_pred cccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcceeEEE
Confidence 788999999999999999999999999965422111111
Q ss_pred -CCCCc-eeEEEecCCCeEEEEeCC------CC------------eEEEEecCCcEEEEeCCCCccc
Q psy7433 162 -GEHAR-SSFFKHIGQGVTQLHVDG------GS------------RLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 162 -~~~~~-~~~~~~~~~~v~~~~~~~------~~------------~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
..... ...+..|..++.++.|+| .+ .+|+|+.|++|.||.....+.+
T Consensus 251 eR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl 317 (942)
T KOG0973|consen 251 ERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPL 317 (942)
T ss_pred ecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCch
Confidence 11111 122445668999999987 12 3689999999999998765543
|
|
| >KOG0300|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-24 Score=151.57 Aligned_cols=194 Identities=19% Similarity=0.261 Sum_probs=168.1
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
.|.||...|+.++.......+.++ +.|.+.+||.+ +.+.++..+.+|.+.|++++|++.+.++++++.|++..|
T Consensus 143 e~~GHkDGiW~Vaa~~tqpi~gtA---SADhTA~iWs~---Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHI 216 (481)
T KOG0300|consen 143 ELEGHKDGIWHVAADSTQPICGTA---SADHTARIWSL---ESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHI 216 (481)
T ss_pred hhcccccceeeehhhcCCcceeec---ccccceeEEee---ccccceeeecccccceeeEEeccccceEEEccCCcchHH
Confidence 478999999999988877788888 89999999999 789999999999999999999999999999999999999
Q ss_pred Eec------cC----------------------------------ceEEEecccCCCCeeEEEecCCCCEEEEecCCCce
Q psy7433 82 IDL------RQ----------------------------------RVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI 121 (213)
Q Consensus 82 wd~------~~----------------------------------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i 121 (213)
|.. .. ..++..+.+|...|.+..|...++++++++.|.+-
T Consensus 217 W~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTA 296 (481)
T KOG0300|consen 217 WKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTA 296 (481)
T ss_pred HHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccc
Confidence 962 11 01345677888999999999999999999999865
Q ss_pred e-----------------eceEEEEEccCCceEEEecCCCcEEEEEccC-CeeeeeecCCCCceeEEEecCCCeEEEEeC
Q psy7433 122 K-----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSG-NHLLYNFPGEHARSSFFKHIGQGVTQLHVD 183 (213)
Q Consensus 122 ~-----------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 183 (213)
. ...+.++-+|..+++++++.|.+.++||++. -..+..+++|. ..|+++.|.
T Consensus 297 nlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHt----------dtVTS~vF~ 366 (481)
T KOG0300|consen 297 NLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHT----------DTVTSVVFN 366 (481)
T ss_pred eeeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEeccchhhcceeeeecccc----------cceeEEEEe
Confidence 4 5567778889999999999999999999983 34566778876 789999999
Q ss_pred CCCeEEEEecCCcEEEEeCCCCcccccc
Q psy7433 184 GGSRLFSCGADGSMKVRQLPDRDAVVHT 211 (213)
Q Consensus 184 ~~~~l~s~~~d~~i~iw~~~~~~~~~~~ 211 (213)
.+..+++|+.|.+|++||+++...++.+
T Consensus 367 ~dd~vVSgSDDrTvKvWdLrNMRsplAT 394 (481)
T KOG0300|consen 367 TDDRVVSGSDDRTVKVWDLRNMRSPLAT 394 (481)
T ss_pred cCCceeecCCCceEEEeeeccccCccee
Confidence 9999999999999999999988776654
|
|
| >KOG0305|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.9e-24 Score=159.14 Aligned_cols=176 Identities=19% Similarity=0.311 Sum_probs=151.2
Q ss_pred EEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEe
Q psy7433 13 FVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSR 92 (213)
Q Consensus 13 ~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~ 92 (213)
++|+ ..+.+|.+ ....|.+|+. ...........+...|+++.|+++|.+|++|..+|.|.|||..+.+.+..
T Consensus 183 ldWs-s~n~laVa----lg~~vylW~~---~s~~v~~l~~~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~ 254 (484)
T KOG0305|consen 183 LDWS-SANVLAVA----LGQSVYLWSA---SSGSVTELCSFGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRT 254 (484)
T ss_pred hhcc-cCCeEEEE----ecceEEEEec---CCCceEEeEecCCCceEEEEECCCCCEEEEeecCCeEEEEehhhcccccc
Confidence 4566 45577776 5779999997 34443333333478999999999999999999999999999999988888
Q ss_pred ccc-CCCCeeEEEecCCCCEEEEecCCCcee------------------eceEEEEEccCCceEEEecCCCcEEEEEccC
Q psy7433 93 FNA-HESPVKCLAIDPHEEFFVTGAGDGDIK------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSG 153 (213)
Q Consensus 93 ~~~-~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~ 153 (213)
+.. |...|.+++|+ ...+.+|+.++.|. ..|..+.|++|++++++|+.|+.+.|||...
T Consensus 255 ~~~~h~~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~ 332 (484)
T KOG0305|consen 255 LRGSHASRVGSLAWN--SSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLS 332 (484)
T ss_pred ccCCcCceeEEEecc--CceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccCCC
Confidence 888 89999999999 67899999999886 6789999999999999999999999999988
Q ss_pred CeeeeeecCCCCceeEEEecCCCeEEEEeCC--CCeEEEEe--cCCcEEEEeCCCCccc
Q psy7433 154 NHLLYNFPGEHARSSFFKHIGQGVTQLHVDG--GSRLFSCG--ADGSMKVRQLPDRDAV 208 (213)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~l~s~~--~d~~i~iw~~~~~~~~ 208 (213)
.+++..+..|. ..|.+++|+| .+.||+|+ .|+.|++||..++..+
T Consensus 333 ~~p~~~~~~H~----------aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i 381 (484)
T KOG0305|consen 333 PEPKFTFTEHT----------AAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARI 381 (484)
T ss_pred ccccEEEeccc----------eeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEe
Confidence 88888888887 7899999999 56788876 6999999999987544
|
|
| >KOG1273|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.4e-23 Score=146.51 Aligned_cols=178 Identities=16% Similarity=0.224 Sum_probs=147.9
Q ss_pred eEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceE
Q psy7433 10 TSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVI 89 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~ 89 (213)
-.|+.|++.|.+||.| ..||.|.|||+ .+....+.+.+|..+|++++||++|+.|++++.|..|.+||+..|.+
T Consensus 26 a~~~~Fs~~G~~lAvG---c~nG~vvI~D~---~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~ 99 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVG---CANGRVVIYDF---DTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSP 99 (405)
T ss_pred cceEEeccCcceeeee---ccCCcEEEEEc---cccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCc
Confidence 6789999999999999 89999999999 67777888899999999999999999999999999999999999998
Q ss_pred EEecccCCCCeeEEEecCCCC--EEEEecCCCce--------------------eeceEEEEEccCCceEEEecCCCcEE
Q psy7433 90 RSRFNAHESPVKCLAIDPHEE--FFVTGAGDGDI--------------------KSPVKCLAIDPHEEFFVTGAGDGDIK 147 (213)
Q Consensus 90 ~~~~~~~~~~i~~~~~~~~~~--~l~~~~~~~~i--------------------~~~v~~~~~~~~~~~l~~~~~dg~i~ 147 (213)
++.+. ..++|+...|+|... .+++--...-. .....+..|++.|+++++|...|.+.
T Consensus 100 l~rir-f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkll 178 (405)
T KOG1273|consen 100 LKRIR-FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLL 178 (405)
T ss_pred eeEEE-ccCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCCCCEEEEecCcceEE
Confidence 88887 678999999998443 22222221111 13344556889999999999999999
Q ss_pred EEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCC-CeEEEEecCCcEEEEeCC
Q psy7433 148 VWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG-SRLFSCGADGSMKVRQLP 203 (213)
Q Consensus 148 v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~d~~i~iw~~~ 203 (213)
++|..+.+++..++.... ..|..+.++-. ..|+.-+.|..||.|++.
T Consensus 179 v~~a~t~e~vas~rits~---------~~IK~I~~s~~g~~liiNtsDRvIR~ye~~ 226 (405)
T KOG1273|consen 179 VYDAETLECVASFRITSV---------QAIKQIIVSRKGRFLIINTSDRVIRTYEIS 226 (405)
T ss_pred EEecchheeeeeeeechh---------eeeeEEEEeccCcEEEEecCCceEEEEehh
Confidence 999999998888775431 56888888864 468899999999999987
|
|
| >KOG2445|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.3e-23 Score=141.88 Aligned_cols=195 Identities=17% Similarity=0.254 Sum_probs=151.8
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCC-CcccccceeeeeeecCCceEEEEec--CCCEEEEEcCCCcEEE
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSL-LPQKKALVQAFVCHDQGASSLVFAP--QHQLLISAGKKGDICV 81 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~-~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~v~i 81 (213)
+|..-|.++.|.+.|+.+|+| +.|++|+|||.+ ...+..+....+.|.+.|..+.|-+ -|+.+|+++.|+++.|
T Consensus 11 ~h~DlihdVs~D~~GRRmAtC---SsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~i 87 (361)
T KOG2445|consen 11 GHKDLIHDVSFDFYGRRMATC---SSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSI 87 (361)
T ss_pred CCcceeeeeeecccCceeeec---cCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceee
Confidence 688999999999999999999 899999999964 3345677888999999999999965 5899999999999999
Q ss_pred EeccC---------ceEEEecccCCCCeeEEEecC--CCCEEEEecCCCcee----------------------------
Q psy7433 82 IDLRQ---------RVIRSRFNAHESPVKCLAIDP--HEEFFVTGAGDGDIK---------------------------- 122 (213)
Q Consensus 82 wd~~~---------~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~~~~i~---------------------------- 122 (213)
|.-.. .....++......|+.+.|.| -|-.+++++.||.++
T Consensus 88 WEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~ 167 (361)
T KOG2445|consen 88 WEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGK 167 (361)
T ss_pred eeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCccc
Confidence 97521 134455666778899999998 466899999999886
Q ss_pred --------------------------------------------------------eceEEEEEccC-C---ceEEEecC
Q psy7433 123 --------------------------------------------------------SPVKCLAIDPH-E---EFFVTGAG 142 (213)
Q Consensus 123 --------------------------------------------------------~~v~~~~~~~~-~---~~l~~~~~ 142 (213)
.+|+.++|.|+ | .+|++++.
T Consensus 168 ~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~k 247 (361)
T KOG2445|consen 168 NKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATK 247 (361)
T ss_pred ccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEeec
Confidence 78999999996 3 37999999
Q ss_pred CCcEEEEEccCCe-ee------eee---cCCCCceeEEEecCCCeEEEEeCC-CCeEEEEecCCcEEEEeCC
Q psy7433 143 DGDIKVWSLSGNH-LL------YNF---PGEHARSSFFKHIGQGVTQLHVDG-GSRLFSCGADGSMKVRQLP 203 (213)
Q Consensus 143 dg~i~v~d~~~~~-~~------~~~---~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~s~~~d~~i~iw~~~ 203 (213)
|| |+||.++... .+ ... .........+..|.+.|..+.|+- +..|++.|.||.||+|...
T Consensus 248 Dg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWkan 318 (361)
T KOG2445|consen 248 DG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKAN 318 (361)
T ss_pred Cc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEeecCCCceeeehhhh
Confidence 99 9999997421 00 000 000011122344558999999986 4468899999999999754
|
|
| >KOG0302|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.1e-24 Score=150.96 Aligned_cols=189 Identities=20% Similarity=0.279 Sum_probs=151.9
Q ss_pred ccccCceEEEEEeCCC--CeEEEeeccCCCccEEEEeCCCc-------------ccccceeeeeeecCCceEEEEecC-C
Q psy7433 4 QCHNKITSDFVFLGSC--SLVATAGHSSESKNVCLWDSLLP-------------QKKALVQAFVCHDQGASSLVFAPQ-H 67 (213)
Q Consensus 4 ~~h~~~v~~~~~~~~~--~~l~~~g~~s~~~~i~iwd~~~~-------------~~~~~~~~~~~~~~~v~~~~~~~~-~ 67 (213)
-+|.+.++.+..++-+ .+.|+- +..|.|.||++... ...+++.++.+|...=..++|||- .
T Consensus 148 i~h~g~~NRvr~~~~~~~~~~asw---se~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~ 224 (440)
T KOG0302|consen 148 IPHYGGINRVRVSRLGNEVLCASW---SENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKT 224 (440)
T ss_pred cccccccceeeecccCCcceeeee---cccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeecccccc
Confidence 3677888888877754 456666 89999999998421 234567778889888899999992 3
Q ss_pred CEEEEEcCCCcEEEEeccCceEE---EecccCCCCeeEEEecCC-CCEEEEecCCCcee-------------------ec
Q psy7433 68 QLLISAGKKGDICVIDLRQRVIR---SRFNAHESPVKCLAIDPH-EEFFVTGAGDGDIK-------------------SP 124 (213)
Q Consensus 68 ~~l~~~~~d~~v~iwd~~~~~~~---~~~~~~~~~i~~~~~~~~-~~~l~~~~~~~~i~-------------------~~ 124 (213)
..|++|..-+.|++|...++.-. ..+.+|...|-.++|+|. ...|++|+.|+.|+ +.
T Consensus 225 g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~sD 304 (440)
T KOG0302|consen 225 GRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHNSD 304 (440)
T ss_pred cccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEeeccCCc
Confidence 35889888899999999887432 345679999999999994 56899999999997 78
Q ss_pred eEEEEEccCCceEEEecCCCcEEEEEccCC---eeeeeecCCCCceeEEEecCCCeEEEEeCC--CCeEEEEecCCcEEE
Q psy7433 125 VKCLAIDPHEEFFVTGAGDGDIKVWSLSGN---HLLYNFPGEHARSSFFKHIGQGVTQLHVDG--GSRLFSCGADGSMKV 199 (213)
Q Consensus 125 v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~l~s~~~d~~i~i 199 (213)
|+.+.|+..-.+|++|+.||+++|||+|.. .++..+..| ..+|+++.|+| +..|++++.|..|.+
T Consensus 305 VNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~H----------k~pItsieW~p~e~s~iaasg~D~Qiti 374 (440)
T KOG0302|consen 305 VNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYH----------KAPITSIEWHPHEDSVIAASGEDNQITI 374 (440)
T ss_pred eeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEec----------cCCeeEEEeccccCceEEeccCCCcEEE
Confidence 899999998889999999999999999853 444555554 48999999998 356999999999999
Q ss_pred EeCCCC
Q psy7433 200 RQLPDR 205 (213)
Q Consensus 200 w~~~~~ 205 (213)
||+.-.
T Consensus 375 WDlsvE 380 (440)
T KOG0302|consen 375 WDLSVE 380 (440)
T ss_pred EEeecc
Confidence 999754
|
|
| >KOG0278|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.2e-25 Score=148.28 Aligned_cols=190 Identities=16% Similarity=0.218 Sum_probs=171.7
Q ss_pred CccccccCceEEEEEeC---CCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCC
Q psy7433 1 MTYQCHNKITSDFVFLG---SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKG 77 (213)
Q Consensus 1 ~~l~~h~~~v~~~~~~~---~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 77 (213)
++..||+.+|-.++|+| +|-+|+++ +.|+.-.+-+= .++.-+.++.+|.+.|.....+.+..+.++++.|=
T Consensus 8 l~c~ghtrpvvdl~~s~itp~g~flisa---~kd~~pmlr~g---~tgdwigtfeghkgavw~~~l~~na~~aasaaadf 81 (334)
T KOG0278|consen 8 LTCHGHTRPVVDLAFSPITPDGYFLISA---SKDGKPMLRNG---DTGDWIGTFEGHKGAVWSATLNKNATRAASAAADF 81 (334)
T ss_pred eEEcCCCcceeEEeccCCCCCceEEEEe---ccCCCchhccC---CCCCcEEeeeccCcceeeeecCchhhhhhhhcccc
Confidence 35679999999999996 88899998 78988776654 77888999999999999999999888899999999
Q ss_pred cEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee------------------eceEEEEEccCCceEEE
Q psy7433 78 DICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------SPVKCLAIDPHEEFFVT 139 (213)
Q Consensus 78 ~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------~~v~~~~~~~~~~~l~~ 139 (213)
+-++||.-+|..+..+. |..-|..++|+.|.++|++|+.+..++ ..|..+.|....+.+++
T Consensus 82 takvw~a~tgdelhsf~-hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLS 160 (334)
T KOG0278|consen 82 TAKVWDAVTGDELHSFE-HKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILS 160 (334)
T ss_pred hhhhhhhhhhhhhhhhh-hhheeeeEEecccchhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEe
Confidence 99999999999888886 888899999999999999999999876 78999999998899999
Q ss_pred ecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCccc
Q psy7433 140 GAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 140 ~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
++.|++|++||.+++...+++... .+|+++..++++.+++....+.|.+||..+-..+
T Consensus 161 Sadd~tVRLWD~rTgt~v~sL~~~-----------s~VtSlEvs~dG~ilTia~gssV~Fwdaksf~~l 218 (334)
T KOG0278|consen 161 SADDKTVRLWDHRTGTEVQSLEFN-----------SPVTSLEVSQDGRILTIAYGSSVKFWDAKSFGLL 218 (334)
T ss_pred eccCCceEEEEeccCcEEEEEecC-----------CCCcceeeccCCCEEEEecCceeEEeccccccce
Confidence 999999999999999999999875 5899999999999999999999999999876544
|
|
| >KOG0299|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.1e-23 Score=151.73 Aligned_cols=193 Identities=16% Similarity=0.237 Sum_probs=161.1
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccc--------------cceeee-eeecCCceEEEEecC
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKK--------------ALVQAF-VCHDQGASSLVFAPQ 66 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~--------------~~~~~~-~~~~~~v~~~~~~~~ 66 (213)
.+..|.-+|.+++++|++.+..++ +.+++|.=|++.+..+. ...+.- +.|...+.+++.++|
T Consensus 137 ~~~~H~~s~~~vals~d~~~~fsa---sk~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~D 213 (479)
T KOG0299|consen 137 VIGKHQLSVTSVALSPDDKRVFSA---SKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSD 213 (479)
T ss_pred eeccccCcceEEEeeccccceeec---CCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCC
Confidence 356799999999999999999999 89999999998433211 011111 267888999999999
Q ss_pred CCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEE
Q psy7433 67 HQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLA 129 (213)
Q Consensus 67 ~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~ 129 (213)
+++|++|+.|..|.||+.++.+.++.+.+|.+.|.+++|-.....+.+++.|+.++ ..|..+.
T Consensus 214 gkylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~Id 293 (479)
T KOG0299|consen 214 GKYLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQDGVLGID 293 (479)
T ss_pred CcEEEecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCccceeeec
Confidence 99999999999999999999999999999999999999999888999999999987 6677777
Q ss_pred EccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCccc
Q psy7433 130 IDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 130 ~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
-..-++.+-+|+.|+++++|++.. +....+.++. +.+.|++|-.+..+++|+.+|.|.+|++...+.+
T Consensus 294 aL~reR~vtVGgrDrT~rlwKi~e-esqlifrg~~----------~sidcv~~In~~HfvsGSdnG~IaLWs~~KKkpl 361 (479)
T KOG0299|consen 294 ALSRERCVTVGGRDRTVRLWKIPE-ESQLIFRGGE----------GSIDCVAFINDEHFVSGSDNGSIALWSLLKKKPL 361 (479)
T ss_pred hhcccceEEeccccceeEEEeccc-cceeeeeCCC----------CCeeeEEEecccceeeccCCceEEEeeecccCce
Confidence 766677788888999999999933 3333344443 6899999999999999999999999999877554
|
|
| >KOG2048|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.5e-23 Score=154.77 Aligned_cols=194 Identities=19% Similarity=0.236 Sum_probs=158.5
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeee-cCCceEEEEecCCCEEEEEcCCCcEEEEecc
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCH-DQGASSLVFAPQHQLLISAGKKGDICVIDLR 85 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~ 85 (213)
..+|.+++++.+.+.||.+ ..+|.|.+|+++. ..-+...+.++ +..|.+++|+ ++.+|++.+.+|.|.-||+.
T Consensus 25 Ps~I~slA~s~kS~~lAvs---Rt~g~IEiwN~~~--~w~~~~vi~g~~drsIE~L~W~-e~~RLFS~g~sg~i~EwDl~ 98 (691)
T KOG2048|consen 25 PSEIVSLAYSHKSNQLAVS---RTDGNIEIWNLSN--NWFLEPVIHGPEDRSIESLAWA-EGGRLFSSGLSGSITEWDLH 98 (691)
T ss_pred ccceEEEEEeccCCceeee---ccCCcEEEEccCC--CceeeEEEecCCCCceeeEEEc-cCCeEEeecCCceEEEEecc
Confidence 3679999999999999999 7999999999963 34444445544 4679999999 45578888999999999999
Q ss_pred CceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-------------------eceEEEEEccCCceEEEecCCCcE
Q psy7433 86 QRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-------------------SPVKCLAIDPHEEFFVTGAGDGDI 146 (213)
Q Consensus 86 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-------------------~~v~~~~~~~~~~~l~~~~~dg~i 146 (213)
++++...+....+.|++++.+|.+..+++|+.||.+. +.+.+++|+|++..++.|+.||.|
T Consensus 99 ~lk~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~I 178 (691)
T KOG2048|consen 99 TLKQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVI 178 (691)
T ss_pred cCceeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCceE
Confidence 9999999998999999999999999999999999554 889999999999999999999999
Q ss_pred EEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCccc
Q psy7433 147 KVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 147 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
++||..++..+.......... -+....-|.++.+-.++.+++|...|+|.+||...+...
T Consensus 179 riwd~~~~~t~~~~~~~~d~l--~k~~~~iVWSv~~Lrd~tI~sgDS~G~V~FWd~~~gTLi 238 (691)
T KOG2048|consen 179 RIWDVKSGQTLHIITMQLDRL--SKREPTIVWSVLFLRDSTIASGDSAGTVTFWDSIFGTLI 238 (691)
T ss_pred EEEEcCCCceEEEeeeccccc--ccCCceEEEEEEEeecCcEEEecCCceEEEEcccCcchh
Confidence 999999888776322211000 000013477777777889999999999999999887543
|
|
| >KOG2096|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.6e-23 Score=143.17 Aligned_cols=200 Identities=19% Similarity=0.253 Sum_probs=147.2
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccc--ccee------------------------------
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKK--ALVQ------------------------------ 49 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~--~~~~------------------------------ 49 (213)
+|++|.+.|++++|+.||++||++ +.|+.|++|++++-... ++++
T Consensus 81 ~LKgH~~~vt~~~FsSdGK~lat~---~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l 157 (420)
T KOG2096|consen 81 VLKGHKKEVTDVAFSSDGKKLATI---SGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKL 157 (420)
T ss_pred hhhccCCceeeeEEcCCCceeEEE---eCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEE
Confidence 689999999999999999999999 89999999998531100 0000
Q ss_pred -eee-----------------------eecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEe
Q psy7433 50 -AFV-----------------------CHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAI 105 (213)
Q Consensus 50 -~~~-----------------------~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~ 105 (213)
.+. .|.-.+..+-.--++.+|++++.|..|.+|+++ |+.++.+...+..-+..+.
T Consensus 158 ~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~aav 236 (420)
T KOG2096|consen 158 CVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYDAAV 236 (420)
T ss_pred EEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-Cceeeeeccccccccceee
Confidence 000 011223333333456689999999999999999 8899998888888889999
Q ss_pred cCCCCEEEEecCCCcee-------------------------eceEEEEEccCCceEEEecCCCcEEEEEccC----Cee
Q psy7433 106 DPHEEFFVTGAGDGDIK-------------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSG----NHL 156 (213)
Q Consensus 106 ~~~~~~l~~~~~~~~i~-------------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~----~~~ 156 (213)
+|+|+++++++....++ ..|..++|+|+.+.+++.+.||.+++||..- ++-
T Consensus 237 SP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~qD 316 (420)
T KOG2096|consen 237 SPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYEAGQD 316 (420)
T ss_pred CCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccceEecCCC
Confidence 99999999998876664 7899999999999999999999999999742 111
Q ss_pred eeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCccc
Q psy7433 157 LYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
...+.... ......++....+..+|++.+++.+....++++..+.++.+
T Consensus 317 pk~Lk~g~---~pl~aag~~p~RL~lsP~g~~lA~s~gs~l~~~~se~g~~~ 365 (420)
T KOG2096|consen 317 PKILKEGS---APLHAAGSEPVRLELSPSGDSLAVSFGSDLKVFASEDGKDY 365 (420)
T ss_pred chHhhcCC---cchhhcCCCceEEEeCCCCcEEEeecCCceEEEEcccCccc
Confidence 11111110 11111224445899999888878888889999998876543
|
|
| >KOG0301|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=2e-23 Score=158.54 Aligned_cols=181 Identities=15% Similarity=0.241 Sum_probs=158.3
Q ss_pred CccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEE
Q psy7433 1 MTYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDIC 80 (213)
Q Consensus 1 ~~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 80 (213)
++|+||+..|.+++...++. ++++ |.|.++++|.. .++...+++|...|.+++.-|++ .+++|+.|.+|+
T Consensus 95 ~~LkgH~snVC~ls~~~~~~-~iSg---SWD~TakvW~~-----~~l~~~l~gH~asVWAv~~l~e~-~~vTgsaDKtIk 164 (745)
T KOG0301|consen 95 YTLKGHKSNVCSLSIGEDGT-LISG---SWDSTAKVWRI-----GELVYSLQGHTASVWAVASLPEN-TYVTGSADKTIK 164 (745)
T ss_pred hhhhccccceeeeecCCcCc-eEec---ccccceEEecc-----hhhhcccCCcchheeeeeecCCC-cEEeccCcceee
Confidence 57999999999999888887 8888 89999999985 44556689999999999999987 899999999999
Q ss_pred EEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee----------------eceEEEEEccCCceEEEecCCC
Q psy7433 81 VIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----------------SPVKCLAIDPHEEFFVTGAGDG 144 (213)
Q Consensus 81 iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------~~v~~~~~~~~~~~l~~~~~dg 144 (213)
+|.- ++.++.|.+|.+-|+.+++-+++ .|++|+.||.|+ .-+.+++...++..++++++|+
T Consensus 165 lWk~--~~~l~tf~gHtD~VRgL~vl~~~-~flScsNDg~Ir~w~~~ge~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDr 241 (745)
T KOG0301|consen 165 LWKG--GTLLKTFSGHTDCVRGLAVLDDS-HFLSCSNDGSIRLWDLDGEVLLEMHGHTNFVYSISMALSDGLIVSTGEDR 241 (745)
T ss_pred eccC--CchhhhhccchhheeeeEEecCC-CeEeecCCceEEEEeccCceeeeeeccceEEEEEEecCCCCeEEEecCCc
Confidence 9975 77889999999999999999864 588999999997 6788888888888999999999
Q ss_pred cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCc
Q psy7433 145 DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 145 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~ 206 (213)
++++|+.. ++.+.+..+. ..|.++.+-+++.+++|+.||.||||.....+
T Consensus 242 tlriW~~~--e~~q~I~lPt----------tsiWsa~~L~NgDIvvg~SDG~VrVfT~~k~R 291 (745)
T KOG0301|consen 242 TLRIWKKD--ECVQVITLPT----------TSIWSAKVLLNGDIVVGGSDGRVRVFTVDKDR 291 (745)
T ss_pred eEEEeecC--ceEEEEecCc----------cceEEEEEeeCCCEEEeccCceEEEEEecccc
Confidence 99999976 6666666554 57999999888999999999999999987543
|
|
| >KOG0267|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.1e-25 Score=167.51 Aligned_cols=176 Identities=22% Similarity=0.416 Sum_probs=159.7
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
.|.+|..+|.++.|+++..+|+++ +.+|+|++||+ +..+.++++.+|...+..+.|+|-+.+.++|+.|+.+++
T Consensus 65 S~~~hespIeSl~f~~~E~Llaag---sasgtiK~wDl---eeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~i 138 (825)
T KOG0267|consen 65 SLTGHESPIESLTFDTSERLLAAG---SASGTIKVWDL---EEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKI 138 (825)
T ss_pred eeeccCCcceeeecCcchhhhccc---ccCCceeeeeh---hhhhhhhhhhccccCcceeeeccceEEecccccccccee
Confidence 368999999999999999999999 89999999999 678888999999999999999999999999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCCC
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDG 144 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg 144 (213)
||.+...+...+.+|...+..+.|+|+|++++.+++|..++ ..+..+.|+|..-+++.|+.|+
T Consensus 139 wD~Rk~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~ 218 (825)
T KOG0267|consen 139 WDIRKKGCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDR 218 (825)
T ss_pred hhhhccCceeeecCCcceeEEEeecCCCceeeccCCcceeeeecccccccccccccccccccccccCchhhhhccCCCCc
Confidence 99998888899999999999999999999999999988876 6788889999988999999999
Q ss_pred cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEec
Q psy7433 145 DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGA 193 (213)
Q Consensus 145 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~ 193 (213)
++++||+++.+.+....... ..|.+..|+|++..+..+.
T Consensus 219 tv~f~dletfe~I~s~~~~~----------~~v~~~~fn~~~~~~~~G~ 257 (825)
T KOG0267|consen 219 TVRFWDLETFEVISSGKPET----------DGVRSLAFNPDGKIVLSGE 257 (825)
T ss_pred eeeeeccceeEEeeccCCcc----------CCceeeeecCCceeeecCc
Confidence 99999999999888877664 7899999999876444433
|
|
| >KOG0270|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.3e-23 Score=150.91 Aligned_cols=184 Identities=17% Similarity=0.289 Sum_probs=150.9
Q ss_pred eEEEEEeC-------CCCeEEEeeccCCCccEEEEeCCCcccccc------------------eeeeeeecCCceEEEEe
Q psy7433 10 TSDFVFLG-------SCSLVATAGHSSESKNVCLWDSLLPQKKAL------------------VQAFVCHDQGASSLVFA 64 (213)
Q Consensus 10 v~~~~~~~-------~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~------------------~~~~~~~~~~v~~~~~~ 64 (213)
..|++|.. .|+++|.| +.+..|.|||+.-...-.+ -..-.+|...|.++.|+
T Consensus 176 PLC~ewld~~~~~~~~gNyvAiG---tmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n 252 (463)
T KOG0270|consen 176 PLCIEWLDHGSKSGGAGNYVAIG---TMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWN 252 (463)
T ss_pred chhhhhhhcCCCCCCCcceEEEe---ccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhc
Confidence 35666643 36799998 8999999999842111100 01123577888899998
Q ss_pred cC-CCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecC-CCCEEEEecCCCcee-----------------ece
Q psy7433 65 PQ-HQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDP-HEEFFVTGAGDGDIK-----------------SPV 125 (213)
Q Consensus 65 ~~-~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~i~-----------------~~v 125 (213)
.. .+.||+|+.|.+|++||+.++++...+..|...|.++.|+| ....|++|+.|+++. +.|
T Consensus 253 ~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~g~V 332 (463)
T KOG0270|consen 253 RNFRNVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKFDGEV 332 (463)
T ss_pred cccceeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEeccce
Confidence 74 46899999999999999999999999999999999999999 566899999999886 789
Q ss_pred EEEEEccCCc-eEEEecCCCcEEEEEccCC-eeeeeecCCCCceeEEEecCCCeEEEEeCC--CCeEEEEecCCcEEEEe
Q psy7433 126 KCLAIDPHEE-FFVTGAGDGDIKVWSLSGN-HLLYNFPGEHARSSFFKHIGQGVTQLHVDG--GSRLFSCGADGSMKVRQ 201 (213)
Q Consensus 126 ~~~~~~~~~~-~l~~~~~dg~i~v~d~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~l~s~~~d~~i~iw~ 201 (213)
..++|+|... .+++++.||+++-+|+|+. +++.++..|. ++|.++++++ .+.+++++.|+.|++|+
T Consensus 333 Ekv~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd----------~~ISgl~~n~~~p~~l~t~s~d~~Vklw~ 402 (463)
T KOG0270|consen 333 EKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKAHD----------DEISGLSVNIQTPGLLSTASTDKVVKLWK 402 (463)
T ss_pred EEEEecCCCceeEEEecCCceEEeeecCCCCCceeEEEecc----------CCcceEEecCCCCcceeeccccceEEEEe
Confidence 9999999765 7888899999999999865 8899999987 7899999987 46799999999999999
Q ss_pred CCCCc
Q psy7433 202 LPDRD 206 (213)
Q Consensus 202 ~~~~~ 206 (213)
+....
T Consensus 403 ~~~~~ 407 (463)
T KOG0270|consen 403 FDVDS 407 (463)
T ss_pred ecCCC
Confidence 97543
|
|
| >KOG1036|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.2e-22 Score=141.13 Aligned_cols=192 Identities=20% Similarity=0.301 Sum_probs=144.9
Q ss_pred ccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEecc
Q psy7433 6 HNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLR 85 (213)
Q Consensus 6 h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~ 85 (213)
....|.++.|+|.+..|+.+ ++||++++||+. .......+ .|..++.+++|.+ ...+++|+.||.|+.+|+.
T Consensus 12 P~d~IS~v~f~~~~~~LLvs---sWDgslrlYdv~---~~~l~~~~-~~~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln 83 (323)
T KOG1036|consen 12 PEDGISSVKFSPSSSDLLVS---SWDGSLRLYDVP---ANSLKLKF-KHGAPLLDCAFAD-ESTIVTGGLDGQVRRYDLN 83 (323)
T ss_pred ChhceeeEEEcCcCCcEEEE---eccCcEEEEecc---chhhhhhe-ecCCceeeeeccC-CceEEEeccCceEEEEEec
Confidence 35679999999988877777 799999999984 33333333 4889999999987 4579999999999999999
Q ss_pred CceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee----------------eceEEEEEccCCceEEEecCCCcEEEE
Q psy7433 86 QRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----------------SPVKCLAIDPHEEFFVTGAGDGDIKVW 149 (213)
Q Consensus 86 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------~~v~~~~~~~~~~~l~~~~~dg~i~v~ 149 (213)
+++... +..|..++.|+..++....+++|+.|+.++ ..|.+|... +..|++|+.+..+.+|
T Consensus 84 ~~~~~~-igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~~kkVy~~~v~--g~~LvVg~~~r~v~iy 160 (323)
T KOG1036|consen 84 TGNEDQ-IGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFDQGKKVYCMDVS--GNRLVVGTSDRKVLIY 160 (323)
T ss_pred CCccee-eccCCCceEEEEeeccCCeEEEcccCccEEEEeccccccccccccCceEEEEecc--CCEEEEeecCceEEEE
Confidence 886543 456999999999999888999999999997 455666554 6778888888889999
Q ss_pred EccCCee---------------eeeec-----------C--------CC----CceeEEEec---------CCCeEEEEe
Q psy7433 150 SLSGNHL---------------LYNFP-----------G--------EH----ARSSFFKHI---------GQGVTQLHV 182 (213)
Q Consensus 150 d~~~~~~---------------~~~~~-----------~--------~~----~~~~~~~~~---------~~~v~~~~~ 182 (213)
|+|+... +.-++ + +. ...-.++.| .-+|++++|
T Consensus 161 DLRn~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~F 240 (323)
T KOG1036|consen 161 DLRNLDEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAF 240 (323)
T ss_pred EcccccchhhhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEe
Confidence 9875321 11111 0 00 000011111 147999999
Q ss_pred CC-CCeEEEEecCCcEEEEeCCCCccc
Q psy7433 183 DG-GSRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 183 ~~-~~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
+| .+.|+||+.||.|.+||+.+.+.+
T Consensus 241 hp~~~tfaTgGsDG~V~~Wd~~~rKrl 267 (323)
T KOG1036|consen 241 HPIHGTFATGGSDGIVNIWDLFNRKRL 267 (323)
T ss_pred ccccceEEecCCCceEEEccCcchhhh
Confidence 99 578999999999999999987655
|
|
| >KOG1332|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=1e-22 Score=137.65 Aligned_cols=190 Identities=18% Similarity=0.234 Sum_probs=151.1
Q ss_pred ccccccCceEEEEEeC--CCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecC--CCEEEEEcCCC
Q psy7433 2 TYQCHNKITSDFVFLG--SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQ--HQLLISAGKKG 77 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~--~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~ 77 (213)
+|.||.++|+.++|.. .|.+||++ +.||.|.||.-+.+ ..........|...|++++|-|. |-.|++++.||
T Consensus 51 ~L~Gh~GPVwqv~wahPk~G~iLASc---sYDgkVIiWke~~g-~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG 126 (299)
T KOG1332|consen 51 ELTGHSGPVWKVAWAHPKFGTILASC---SYDGKVIIWKEENG-RWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDG 126 (299)
T ss_pred EecCCCCCeeEEeecccccCcEeeEe---ecCceEEEEecCCC-chhhhhhhhhhcccceeecccccccceEEEEeeCCC
Confidence 6899999999999976 89999999 89999999997543 44555667789999999999984 56889999999
Q ss_pred cEEEEeccCc---eEEEecccCCCCeeEEEecCC---C-----------CEEEEecCCCcee------------------
Q psy7433 78 DICVIDLRQR---VIRSRFNAHESPVKCLAIDPH---E-----------EFFVTGAGDGDIK------------------ 122 (213)
Q Consensus 78 ~v~iwd~~~~---~~~~~~~~~~~~i~~~~~~~~---~-----------~~l~~~~~~~~i~------------------ 122 (213)
.|.+.+.++. ........|.-.+++++|.|. | +.|++|+.|..++
T Consensus 127 ~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H 206 (299)
T KOG1332|consen 127 KVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGH 206 (299)
T ss_pred cEEEEEEcCCCCccchhhhhccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCcchhhhhhhhhc
Confidence 9999988764 233445678899999999985 4 5699999999887
Q ss_pred -eceEEEEEccCC----ceEEEecCCCcEEEEEccCC-ee-eeeecCCCCceeEEEecCCCeEEEEeCC-CCeEEEEecC
Q psy7433 123 -SPVKCLAIDPHE----EFFVTGAGDGDIKVWSLSGN-HL-LYNFPGEHARSSFFKHIGQGVTQLHVDG-GSRLFSCGAD 194 (213)
Q Consensus 123 -~~v~~~~~~~~~----~~l~~~~~dg~i~v~d~~~~-~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~s~~~d 194 (213)
..|+.++|.|.- .+|+++++||++.||-.+.. +. ..++.. . ....+..+.|+. ++.|+.++.|
T Consensus 207 ~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~e~wk~tll~-~--------f~~~~w~vSWS~sGn~LaVs~Gd 277 (299)
T KOG1332|consen 207 KDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEYEPWKKTLLE-E--------FPDVVWRVSWSLSGNILAVSGGD 277 (299)
T ss_pred chhhhhhhhccccCCCceeeEEecCCCcEEEEEecCccCcccccccc-c--------CCcceEEEEEeccccEEEEecCC
Confidence 678999999963 38999999999999987522 11 111111 1 126799999998 5578888999
Q ss_pred CcEEEEeCCC
Q psy7433 195 GSMKVRQLPD 204 (213)
Q Consensus 195 ~~i~iw~~~~ 204 (213)
+.|.+|.=..
T Consensus 278 Nkvtlwke~~ 287 (299)
T KOG1332|consen 278 NKVTLWKENV 287 (299)
T ss_pred cEEEEEEeCC
Confidence 9999996543
|
|
| >KOG0282|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.6e-24 Score=157.23 Aligned_cols=153 Identities=20% Similarity=0.387 Sum_probs=140.8
Q ss_pred cccceeeeeeecCCceEEEEec-CCCEEEEEcCCCcEEEEeccC-ceEEEecccCCCCeeEEEecCCCCEEEEecCCCce
Q psy7433 44 KKALVQAFVCHDQGASSLVFAP-QHQLLISAGKKGDICVIDLRQ-RVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI 121 (213)
Q Consensus 44 ~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~iwd~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i 121 (213)
..+.+..+.+|...|+++.|.| .+.+|++++.|+.|+||++.. +++++.+.+|..+|..++|++++..|++++.|+.+
T Consensus 203 Pkk~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~l 282 (503)
T KOG0282|consen 203 PKKLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFL 282 (503)
T ss_pred cHhheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceee
Confidence 3456778899999999999999 889999999999999999976 79999999999999999999999999999999999
Q ss_pred e----------------eceEEEEEccCC-ceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCC
Q psy7433 122 K----------------SPVKCLAIDPHE-EFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG 184 (213)
Q Consensus 122 ~----------------~~v~~~~~~~~~-~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 184 (213)
+ ..++|+.|+|++ +.+++|+.|+.|+.||+|+++.++.+..|- +.|..+.|-+
T Consensus 283 KlwDtETG~~~~~f~~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hL----------g~i~~i~F~~ 352 (503)
T KOG0282|consen 283 KLWDTETGQVLSRFHLDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHL----------GAILDITFVD 352 (503)
T ss_pred eeeccccceEEEEEecCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhh----------hheeeeEEcc
Confidence 7 778999999998 799999999999999999999999998876 7899999998
Q ss_pred CC-eEEEEecCCcEEEEeCCCCc
Q psy7433 185 GS-RLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 185 ~~-~l~s~~~d~~i~iw~~~~~~ 206 (213)
++ ++++.+.|++++||+.+.+-
T Consensus 353 ~g~rFissSDdks~riWe~~~~v 375 (503)
T KOG0282|consen 353 EGRRFISSSDDKSVRIWENRIPV 375 (503)
T ss_pred CCceEeeeccCccEEEEEcCCCc
Confidence 65 69999999999999998653
|
|
| >KOG0646|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-22 Score=147.68 Aligned_cols=169 Identities=22% Similarity=0.365 Sum_probs=147.5
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCC------cccccceeeeeeecCCceEEEEecC--CCEEEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLL------PQKKALVQAFVCHDQGASSLVFAPQ--HQLLISA 73 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~------~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~ 73 (213)
++.+|-..|+|+.|+.||.+|+++ +.||.|.+|++.. ....+.+..+..|.-+|+.+...+. ..+|+++
T Consensus 118 v~~aHYQ~ITcL~fs~dgs~iiTg---skDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~Ta 194 (476)
T KOG0646|consen 118 VLSAHYQSITCLKFSDDGSHIITG---SKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTA 194 (476)
T ss_pred HHHhhccceeEEEEeCCCcEEEec---CCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEe
Confidence 467899999999999999999999 7999999998721 1245677888899999999998764 4689999
Q ss_pred cCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-------------------------------
Q psy7433 74 GKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------------------- 122 (213)
Q Consensus 74 ~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------------------- 122 (213)
+.|.++++||+..+..+..+. .+..+.+++.+|.++.+.+|+++|.+.
T Consensus 195 S~D~t~k~wdlS~g~LLlti~-fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~G 273 (476)
T KOG0646|consen 195 SEDRTIKLWDLSLGVLLLTIT-FPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVG 273 (476)
T ss_pred cCCceEEEEEeccceeeEEEe-cCCcceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeecc
Confidence 999999999999998888775 577899999999999999999999885
Q ss_pred ----eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCC
Q psy7433 123 ----SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG 184 (213)
Q Consensus 123 ----~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 184 (213)
..|+|++++-||.+|++|+.||.+.|||+.+.+++.++.... ++|+.+.+.|
T Consensus 274 h~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~S~Q~iRtl~~~k----------gpVtnL~i~~ 329 (476)
T KOG0646|consen 274 HENESAITCLAISTDGTLLLSGDEDGKVCVWDIYSKQCIRTLQTSK----------GPVTNLQINP 329 (476)
T ss_pred ccCCcceeEEEEecCccEEEeeCCCCCEEEEecchHHHHHHHhhhc----------cccceeEeec
Confidence 489999999999999999999999999999988888876433 6788888855
|
|
| >KOG0300|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.4e-23 Score=143.43 Aligned_cols=190 Identities=18% Similarity=0.300 Sum_probs=161.0
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeC----CCcc---------------------------------c
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDS----LLPQ---------------------------------K 44 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~----~~~~---------------------------------~ 44 (213)
++.||.+.|+++.|++.+.+++++ +.|++-.||.. +.+. -
T Consensus 185 ~Y~GH~GSVNsikfh~s~~L~lTa---SGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~ti 261 (481)
T KOG0300|consen 185 TYTGHTGSVNSIKFHNSGLLLLTA---SGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTI 261 (481)
T ss_pred eecccccceeeEEeccccceEEEc---cCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCcee
Confidence 578999999999999999999999 89999999972 0000 0
Q ss_pred ccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee--
Q psy7433 45 KALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-- 122 (213)
Q Consensus 45 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-- 122 (213)
..++..+.+|...|.++.|...|+.+++++.|.+..+||+++++++..+.+|....+.++-+|..+.+++.+.|.+.+
T Consensus 262 RvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLW 341 (481)
T KOG0300|consen 262 RVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLW 341 (481)
T ss_pred eeeeeeeeccccceEehhhhcCcceeeeeeccccceeeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEec
Confidence 123456778999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred ----------------eceEEEEEccCCceEEEecCCCcEEEEEccCC-eeeeeecCCCCceeEEEecCCCeEEEEeCCC
Q psy7433 123 ----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGN-HLLYNFPGEHARSSFFKHIGQGVTQLHVDGG 185 (213)
Q Consensus 123 ----------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 185 (213)
..|+++.|..+.+ +++|+.|.+|++||+++. .++.++... ++++.++.+.+
T Consensus 342 DFReaI~sV~VFQGHtdtVTS~vF~~dd~-vVSgSDDrTvKvWdLrNMRsplATIRtd-----------S~~NRvavs~g 409 (481)
T KOG0300|consen 342 DFREAIQSVAVFQGHTDTVTSVVFNTDDR-VVSGSDDRTVKVWDLRNMRSPLATIRTD-----------SPANRVAVSKG 409 (481)
T ss_pred cchhhcceeeeecccccceeEEEEecCCc-eeecCCCceEEEeeeccccCcceeeecC-----------CccceeEeecC
Confidence 6788899987654 889999999999999865 456677654 68999999987
Q ss_pred Ce-EEEEecCCcEEEEeCCCCc
Q psy7433 186 SR-LFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 186 ~~-l~s~~~d~~i~iw~~~~~~ 206 (213)
+. ++.--.+..|++||+....
T Consensus 410 ~~iIAiPhDNRqvRlfDlnG~R 431 (481)
T KOG0300|consen 410 HPIIAIPHDNRQVRLFDLNGNR 431 (481)
T ss_pred CceEEeccCCceEEEEecCCCc
Confidence 64 5555566799999998654
|
|
| >KOG0647|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.9e-22 Score=137.57 Aligned_cols=168 Identities=19% Similarity=0.262 Sum_probs=138.5
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCC--EEEEEcCCCcEE
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQ--LLISAGKKGDIC 80 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~v~ 80 (213)
...|.++|.+++|+.+|..++++ +.|+.+++||+ ... .+..+..|..+|.++.|-+... .|++|+.|.+|+
T Consensus 68 ~~~~~~PvL~v~WsddgskVf~g---~~Dk~~k~wDL---~S~-Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlK 140 (347)
T KOG0647|consen 68 QQSHDGPVLDVCWSDDGSKVFSG---GCDKQAKLWDL---ASG-QVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLK 140 (347)
T ss_pred hhccCCCeEEEEEccCCceEEee---ccCCceEEEEc---cCC-CeeeeeecccceeEEEEecCCCcceeEeccccccee
Confidence 35689999999999999999999 68999999999 344 5566778999999999988554 899999999999
Q ss_pred EEeccCceEEEecc-------------------------------------cC----CCCeeEEEecCCCCEEEEecCCC
Q psy7433 81 VIDLRQRVIRSRFN-------------------------------------AH----ESPVKCLAIDPHEEFFVTGAGDG 119 (213)
Q Consensus 81 iwd~~~~~~~~~~~-------------------------------------~~----~~~i~~~~~~~~~~~l~~~~~~~ 119 (213)
+||.++..++..+. .+ .-.++|++..++...++.|+-+|
T Consensus 141 fWD~R~~~pv~t~~LPeRvYa~Dv~~pm~vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEG 220 (347)
T KOG0647|consen 141 FWDTRSSNPVATLQLPERVYAADVLYPMAVVATAERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEG 220 (347)
T ss_pred ecccCCCCeeeeeeccceeeehhccCceeEEEecCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecc
Confidence 99999765433211 01 12467888888888888998888
Q ss_pred cee----------------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEE
Q psy7433 120 DIK----------------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFK 171 (213)
Q Consensus 120 ~i~----------------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~ 171 (213)
.+- ..|++++|+|....|++++.||+..+||-.....+.+.+.+.
T Consensus 221 rv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkdar~kLk~s~~~~------- 293 (347)
T KOG0647|consen 221 RVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDARTKLKTSETHP------- 293 (347)
T ss_pred eEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEeecccceEEEecCCceEEEecchhhhhhhccCcCC-------
Confidence 663 568889999999999999999999999988777777777776
Q ss_pred ecCCCeEEEEeCCCCe
Q psy7433 172 HIGQGVTQLHVDGGSR 187 (213)
Q Consensus 172 ~~~~~v~~~~~~~~~~ 187 (213)
.+|++..|+.++.
T Consensus 294 ---qpItcc~fn~~G~ 306 (347)
T KOG0647|consen 294 ---QPITCCSFNRNGS 306 (347)
T ss_pred ---CccceeEecCCCC
Confidence 7899999997664
|
|
| >KOG4328|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.4e-22 Score=146.31 Aligned_cols=192 Identities=18% Similarity=0.242 Sum_probs=145.2
Q ss_pred cccccCceEEEEEeCCCC--eEEEeeccCCCccEEEEeCC-CcccccceeeeeeecCCceEEEEec-CCCEEEEEcCCCc
Q psy7433 3 YQCHNKITSDFVFLGSCS--LVATAGHSSESKNVCLWDSL-LPQKKALVQAFVCHDQGASSLVFAP-QHQLLISAGKKGD 78 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~--~l~~~g~~s~~~~i~iwd~~-~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~ 78 (213)
.+-|.++|++++|+|..+ ++|+| +..|+|-+||+. ......-+..+..|..+|.++.|+| +-..+++.+.||+
T Consensus 182 ~kv~~~Rit~l~fHPt~~~~lva~G---dK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGt 258 (498)
T KOG4328|consen 182 AKVTDRRITSLAFHPTENRKLVAVG---DKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGT 258 (498)
T ss_pred eEecccceEEEEecccCcceEEEEc---cCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCce
Confidence 456889999999999554 56665 899999999994 1223345556778999999999999 4578999999999
Q ss_pred EEEEeccCce--EEEecccCCCCeeEEEecCCCCEEEEecCCCcee------------------eceEEEEEccCCc-eE
Q psy7433 79 ICVIDLRQRV--IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------SPVKCLAIDPHEE-FF 137 (213)
Q Consensus 79 v~iwd~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------~~v~~~~~~~~~~-~l 137 (213)
|++-|++... .+.........+..+.|+.+...++.+..=|... ..|..|+++|... +|
T Consensus 259 iR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~l 338 (498)
T KOG4328|consen 259 IRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFL 338 (498)
T ss_pred eeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCchhe
Confidence 9999998763 3333333455677888888777777776655221 6899999999766 89
Q ss_pred EEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCC-CCeEEEEecCCcEEEEeCC
Q psy7433 138 VTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG-GSRLFSCGADGSMKVRQLP 203 (213)
Q Consensus 138 ~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~s~~~d~~i~iw~~~ 203 (213)
++++.|++.+|||+|.-..... +......|...|.++.|+| ++.|++.+.|..|+|||..
T Consensus 339 aT~s~D~T~kIWD~R~l~~K~s------p~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss 399 (498)
T KOG4328|consen 339 ATASLDQTAKIWDLRQLRGKAS------PFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSS 399 (498)
T ss_pred eecccCcceeeeehhhhcCCCC------cceecccccceeeeeEEcCCCCceEeeccCCceEEeecc
Confidence 9999999999999985433322 0111112237899999999 5679999999999999984
|
|
| >KOG0642|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=9e-23 Score=151.83 Aligned_cols=196 Identities=21% Similarity=0.340 Sum_probs=170.8
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCC-----cccccceeeeeeecCCceEEEEecCCCEEEEEcCC
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLL-----PQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKK 76 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~-----~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 76 (213)
++.-|...|+++.|.|...-|+++ +.|+.+++|++.. ....+++.++.+|.++|.|++..+++..+++|+.|
T Consensus 289 tl~s~~d~ir~l~~~~sep~lit~---sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~D 365 (577)
T KOG0642|consen 289 TLRSHDDCIRALAFHPSEPVLITA---SEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGID 365 (577)
T ss_pred eeecchhhhhhhhcCCCCCeEEEe---ccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccC
Confidence 566788999999999999999999 8999999999931 12346788899999999999999999999999999
Q ss_pred CcEEEEeccCc----------eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee------------------------
Q psy7433 77 GDICVIDLRQR----------VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------------ 122 (213)
Q Consensus 77 ~~v~iwd~~~~----------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------------ 122 (213)
|+|+.|++... .....+.+|.+.++.+++++....|++++.||+++
T Consensus 366 g~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~~~f~~~~e~g~Plsv 445 (577)
T KOG0642|consen 366 GTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESPCTFGEPKEHGYPLSV 445 (577)
T ss_pred ceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCccccCCccccCCcceE
Confidence 99999966421 23456778999999999999999999999999987
Q ss_pred --------------------------------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeee
Q psy7433 123 --------------------------------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLY 158 (213)
Q Consensus 123 --------------------------------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~ 158 (213)
..+..+.++|.+.+.+++..|+.|+++|..+++.+.
T Consensus 446 d~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~~l~ 525 (577)
T KOG0642|consen 446 DRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKTGKILH 525 (577)
T ss_pred eeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceecccccccccch
Confidence 557788899999999999999999999999999999
Q ss_pred eecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCccccc
Q psy7433 159 NFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDAVVH 210 (213)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~~~ 210 (213)
....|. ..++++++.|++ +|++++.|+.+++|.+......+.
T Consensus 526 s~~a~~----------~svtslai~~ng~~l~s~s~d~sv~l~kld~k~~~~e 568 (577)
T KOG0642|consen 526 SMVAHK----------DSVTSLAIDPNGPYLMSGSHDGSVRLWKLDVKTCVLE 568 (577)
T ss_pred heeecc----------ceecceeecCCCceEEeecCCceeehhhccchheeec
Confidence 988886 689999999964 799999999999999977655544
|
|
| >KOG1274|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.7e-21 Score=151.16 Aligned_cols=190 Identities=14% Similarity=0.255 Sum_probs=160.4
Q ss_pred ccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCc-cccccee-------ee-------------------e----
Q psy7433 4 QCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLP-QKKALVQ-------AF-------------------V---- 52 (213)
Q Consensus 4 ~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~-~~~~~~~-------~~-------------------~---- 52 (213)
.+|+...+.++|.|+|.+|+++ +.||.|++|+.... +..+.+. .+ +
T Consensus 10 yaht~G~t~i~~d~~gefi~tc---gsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~s~~f~~~s~~~tv~~y~fps~ 86 (933)
T KOG1274|consen 10 YAHTGGLTLICYDPDGEFICTC---GSDGDIRKWKTNSDEEEPETIDISGELVSSIACYSNHFLTGSEQNTVLRYKFPSG 86 (933)
T ss_pred hhccCceEEEEEcCCCCEEEEe---cCCCceEEeecCCcccCCchhhccCceeEEEeecccceEEeeccceEEEeeCCCC
Confidence 3789999999999999999999 58999999987533 1111111 00 0
Q ss_pred -------eecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee---
Q psy7433 53 -------CHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK--- 122 (213)
Q Consensus 53 -------~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~--- 122 (213)
-..-++++++|+.+|++++.|+.|-.|++-++.+......+.+|..+|.++.++|++++||+.+.||.++
T Consensus 87 ~~~~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~ 166 (933)
T KOG1274|consen 87 EEDTILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWD 166 (933)
T ss_pred CccceeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEE
Confidence 0124788999999999999999999999999999888888999999999999999999999999999987
Q ss_pred ----------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEE
Q psy7433 123 ----------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQL 180 (213)
Q Consensus 123 ----------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 180 (213)
..+..++|+|++..++....|+.|++|+....+..+.+...... ..+..+
T Consensus 167 ~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~s--------s~~~~~ 238 (933)
T KOG1274|consen 167 LQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSS--------SKFSDL 238 (933)
T ss_pred cccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccc--------cceEEE
Confidence 56778999999888888999999999999999998888764421 459999
Q ss_pred EeCCCC-eEEEEecCCcEEEEeCCC
Q psy7433 181 HVDGGS-RLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 181 ~~~~~~-~l~s~~~d~~i~iw~~~~ 204 (213)
.|+|.+ +||+++.||.|.|||+.+
T Consensus 239 ~wsPnG~YiAAs~~~g~I~vWnv~t 263 (933)
T KOG1274|consen 239 QWSPNGKYIAASTLDGQILVWNVDT 263 (933)
T ss_pred EEcCCCcEEeeeccCCcEEEEeccc
Confidence 999965 699999999999999985
|
|
| >KOG0270|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-22 Score=147.26 Aligned_cols=193 Identities=18% Similarity=0.293 Sum_probs=150.0
Q ss_pred ccccCceEEEEEeCCC-CeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec-CCCEEEEEcCCCcEEE
Q psy7433 4 QCHNKITSDFVFLGSC-SLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP-QHQLLISAGKKGDICV 81 (213)
Q Consensus 4 ~~h~~~v~~~~~~~~~-~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~i 81 (213)
.+|+..|.+++|+..- +.||++ +.|.+|++||+ .++++..++..|...|.++.|+| ....|++|+.|++|.+
T Consensus 240 ~gHTdavl~Ls~n~~~~nVLaSg---saD~TV~lWD~---~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l 313 (463)
T KOG0270|consen 240 SGHTDAVLALSWNRNFRNVLASG---SADKTVKLWDV---DTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVAL 313 (463)
T ss_pred ccchHHHHHHHhccccceeEEec---CCCceEEEEEc---CCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEe
Confidence 4799999999999854 466776 79999999999 68888888888999999999999 5689999999999999
Q ss_pred EeccCceE-EEecccCCCCeeEEEecCCC-CEEEEecCCCcee------------------eceEEEEEccCCc-eEEEe
Q psy7433 82 IDLRQRVI-RSRFNAHESPVKCLAIDPHE-EFFVTGAGDGDIK------------------SPVKCLAIDPHEE-FFVTG 140 (213)
Q Consensus 82 wd~~~~~~-~~~~~~~~~~i~~~~~~~~~-~~l~~~~~~~~i~------------------~~v~~~~~~~~~~-~l~~~ 140 (213)
.|.|.... -..++ ..+.|-.++|.|.. ..++++..||.++ .+|.++++++.-. +++++
T Consensus 314 ~D~R~~~~s~~~wk-~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~ 392 (463)
T KOG0270|consen 314 KDCRDPSNSGKEWK-FDGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTA 392 (463)
T ss_pred eeccCccccCceEE-eccceEEEEecCCCceeEEEecCCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeec
Confidence 99995321 12222 45788999999954 5688888999887 7899999998755 78999
Q ss_pred cCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCC--CeEEEEecCCcEEEEeCCCCcccccc
Q psy7433 141 AGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG--SRLFSCGADGSMKVRQLPDRDAVVHT 211 (213)
Q Consensus 141 ~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~l~s~~~d~~i~iw~~~~~~~~~~~ 211 (213)
+.|+.+++|++....+.......-.. +...|.++.|+ ..|+.|+..+.++|||+.+...+.+.
T Consensus 393 s~d~~Vklw~~~~~~~~~v~~~~~~~--------~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~~~~~V~ka 457 (463)
T KOG0270|consen 393 STDKVVKLWKFDVDSPKSVKEHSFKL--------GRLHCFALDPDVAFTLAFGGEKAVLRVWDIFTNSPVRKA 457 (463)
T ss_pred cccceEEEEeecCCCCcccccccccc--------cceeecccCCCcceEEEecCccceEEEeecccChhHHHh
Confidence 99999999999644332221111000 34666677774 56899999999999999988665544
|
|
| >KOG1408|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.1e-22 Score=153.31 Aligned_cols=191 Identities=16% Similarity=0.251 Sum_probs=166.7
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec---CCCEEEEEcCCCcEEEEe
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP---QHQLLISAGKKGDICVID 83 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~v~iwd 83 (213)
.-.+++++.+|+|++||+| ..-|.+++|++ ........+.+|+.+|.|+.|+. ..++|++++.|+.|.+||
T Consensus 459 r~G~R~~~vSp~gqhLAsG---Dr~GnlrVy~L---q~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~D 532 (1080)
T KOG1408|consen 459 RFGFRALAVSPDGQHLASG---DRGGNLRVYDL---QELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYD 532 (1080)
T ss_pred ccceEEEEECCCcceeccc---CccCceEEEEe---hhhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEe
Confidence 4569999999999999999 88999999999 56667777888999999999985 357899999999999999
Q ss_pred ccCc-eEEEecccCCCCeeEEEecCCC--CEEEEecCCCcee----------------------eceEEEEEccCCceEE
Q psy7433 84 LRQR-VIRSRFNAHESPVKCLAIDPHE--EFFVTGAGDGDIK----------------------SPVKCLAIDPHEEFFV 138 (213)
Q Consensus 84 ~~~~-~~~~~~~~~~~~i~~~~~~~~~--~~l~~~~~~~~i~----------------------~~v~~~~~~~~~~~l~ 138 (213)
+... .+++.+.+|...|+++.|--.+ ..+++++.|+.+. ..+..|+..|..++++
T Consensus 533 v~rny~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~ 612 (1080)
T KOG1408|consen 533 VKRNYDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVV 612 (1080)
T ss_pred cccccchhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEE
Confidence 9654 6778889999999999998876 6899999998875 6789999999999999
Q ss_pred EecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCccccc
Q psy7433 139 TGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDAVVH 210 (213)
Q Consensus 139 ~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~~~ 210 (213)
+++.|..|+|||+.+++....+++.+.. .+....+..+|.+ ++++...|.++.++|+.+++++.+
T Consensus 613 t~cQDrnirif~i~sgKq~k~FKgs~~~-------eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~ 678 (1080)
T KOG1408|consen 613 TVCQDRNIRIFDIESGKQVKSFKGSRDH-------EGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQ 678 (1080)
T ss_pred EEecccceEEEeccccceeeeecccccC-------CCceEEEEECCCccEEEEeecCCceEEEEeccchhhhh
Confidence 9999999999999999999999886532 2567788888854 689999999999999999976643
|
|
| >KOG0639|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.9e-23 Score=151.90 Aligned_cols=177 Identities=16% Similarity=0.284 Sum_probs=157.7
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCc
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR 87 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~ 87 (213)
-.+++++.+||.+...++ ..||.|.|||+ .....++.+++|...+.|+..+++|..|.+|+-|.+|+-||++++
T Consensus 510 paCyALa~spDakvcFsc---csdGnI~vwDL---hnq~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlreg 583 (705)
T KOG0639|consen 510 PACYALAISPDAKVCFSC---CSDGNIAVWDL---HNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREG 583 (705)
T ss_pred hhhhhhhcCCccceeeee---ccCCcEEEEEc---ccceeeecccCCCCCceeEEecCCCceeecCCCccceeehhhhhh
Confidence 347789999999988888 79999999999 678899999999999999999999999999999999999999998
Q ss_pred eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee----------------eceEEEEEccCCceEEEecCCCcEEEEEc
Q psy7433 88 VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSL 151 (213)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~ 151 (213)
..+++.. ....|.++-.+|++.++++|-+++.+. .-|.++.|.+.|+++++.+.|+-+..|..
T Consensus 584 rqlqqhd-F~SQIfSLg~cP~~dWlavGMens~vevlh~skp~kyqlhlheScVLSlKFa~cGkwfvStGkDnlLnawrt 662 (705)
T KOG0639|consen 584 RQLQQHD-FSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPEKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRT 662 (705)
T ss_pred hhhhhhh-hhhhheecccCCCccceeeecccCcEEEEecCCccceeecccccEEEEEEecccCceeeecCchhhhhhccC
Confidence 7766543 467899999999999999999998875 78999999999999999999999999999
Q ss_pred cCCeeeeeecCCCCceeEEEecCCCeEEEEeCC-CCeEEEEecCCcEEEEeC
Q psy7433 152 SGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG-GSRLFSCGADGSMKVRQL 202 (213)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~s~~~d~~i~iw~~ 202 (213)
.-+..++..+.. ++|.++.++- +.+++||+.|....+|.+
T Consensus 663 PyGasiFqskE~-----------SsVlsCDIS~ddkyIVTGSGdkkATVYeV 703 (705)
T KOG0639|consen 663 PYGASIFQSKES-----------SSVLSCDISFDDKYIVTGSGDKKATVYEV 703 (705)
T ss_pred ccccceeecccc-----------CcceeeeeccCceEEEecCCCcceEEEEE
Confidence 888887776553 6899999986 456999999999999875
|
|
| >KOG0302|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.6e-22 Score=141.83 Aligned_cols=194 Identities=21% Similarity=0.338 Sum_probs=147.2
Q ss_pred CccccccCceEEEEEeCCC-CeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecC-CCEEEEEcCCCc
Q psy7433 1 MTYQCHNKITSDFVFLGSC-SLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQ-HQLLISAGKKGD 78 (213)
Q Consensus 1 ~~l~~h~~~v~~~~~~~~~-~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~ 78 (213)
+++.+|...=++++|||-. -.|++| ..-+.|++|...++.-..-...+.+|...|-.++|||. ...|++|+.||.
T Consensus 205 ~t~~ghk~EGy~LdWSp~~~g~LlsG---Dc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~Dgs 281 (440)
T KOG0302|consen 205 FTFNGHKGEGYGLDWSPIKTGRLLSG---DCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGS 281 (440)
T ss_pred EEecccCccceeeecccccccccccC---ccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCce
Confidence 3678999999999999933 347777 67889999998553333344557789999999999994 568999999999
Q ss_pred EEEEeccCce--EEEecccCCCCeeEEEecCCCCEEEEecCCCcee--------------------eceEEEEEccCC-c
Q psy7433 79 ICVIDLRQRV--IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK--------------------SPVKCLAIDPHE-E 135 (213)
Q Consensus 79 v~iwd~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~--------------------~~v~~~~~~~~~-~ 135 (213)
|+|||+|.+. .....+.|.+.|+.++|+..-.+|++|+.||.++ .+|+++.|+|.. .
T Consensus 282 IrIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s 361 (440)
T KOG0302|consen 282 IRIWDIRSGPKKAAVSTKAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDS 361 (440)
T ss_pred EEEEEecCCCccceeEeeccCCceeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCc
Confidence 9999999872 2233378999999999999888999999999886 899999999964 4
Q ss_pred eEEEecCCCcEEEEEccCCe--------eeeeecCCCCceeEEEe-cCCCeEEEEeCC--CCeEEEEecCCcEE
Q psy7433 136 FFVTGAGDGDIKVWSLSGNH--------LLYNFPGEHARSSFFKH-IGQGVTQLHVDG--GSRLFSCGADGSMK 198 (213)
Q Consensus 136 ~l~~~~~dg~i~v~d~~~~~--------~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~--~~~l~s~~~d~~i~ 198 (213)
.|++++.|..|.+||+.... ....+.. -.+...+.+ ....+..+.|++ .+.+++.+.||.-.
T Consensus 362 ~iaasg~D~QitiWDlsvE~D~ee~~~~a~~~L~d-lPpQLLFVHqGQke~KevhWH~QiPG~lvsTa~dGfnV 434 (440)
T KOG0302|consen 362 VIAASGEDNQITIWDLSVEADEEEIDQEAAEGLQD-LPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTAIDGFNV 434 (440)
T ss_pred eEEeccCCCcEEEEEeeccCChhhhccccccchhc-CCceeEEEecchhHhhhheeccCCCCeEEEecccceeE
Confidence 88999999999999995211 1111111 111222333 335788899998 47899999998533
|
|
| >KOG0303|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=9e-22 Score=141.16 Aligned_cols=195 Identities=16% Similarity=0.248 Sum_probs=153.1
Q ss_pred ccccccCceEEEEEeC-CCCeEEEeeccCCCccEEEEeCCCcc----cccceeeeeeecCCceEEEEecC-CCEEEEEcC
Q psy7433 2 TYQCHNKITSDFVFLG-SCSLVATAGHSSESKNVCLWDSLLPQ----KKALVQAFVCHDQGASSLVFAPQ-HQLLISAGK 75 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~-~~~~l~~~g~~s~~~~i~iwd~~~~~----~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~ 75 (213)
.+.||+++|..++|+| +...||+| |.|.+|.||.+.... -.+.+..+.+|...|--++|+|. .+.|++++.
T Consensus 76 ~v~GHt~~vLDi~w~PfnD~vIASg---SeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~ 152 (472)
T KOG0303|consen 76 LVCGHTAPVLDIDWCPFNDCVIASG---SEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGS 152 (472)
T ss_pred CccCccccccccccCccCCceeecC---CCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccC
Confidence 3679999999999999 56677777 899999999984221 12457778899999999999994 478999999
Q ss_pred CCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee------------------eceEEEEEccCCceE
Q psy7433 76 KGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------SPVKCLAIDPHEEFF 137 (213)
Q Consensus 76 d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------~~v~~~~~~~~~~~l 137 (213)
|.+|.+||+.+++.+..+. |.+.|.+++|+.+|.+|++.+.|+.++ .....+.|-.++.++
T Consensus 153 Dn~v~iWnv~tgeali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG~k~~Raifl~~g~i~ 231 (472)
T KOG0303|consen 153 DNTVSIWNVGTGEALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGAKPARAIFLASGKIF 231 (472)
T ss_pred CceEEEEeccCCceeeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccCCCcceeEEeccCcee
Confidence 9999999999999888887 999999999999999999999999887 344556677778855
Q ss_pred EEe---cCCCcEEEEEccCCe---eeeeecCCCCceeEEEecCCCeEEEEeCCCC-e-EEEEecCCcEEEEeCCCCcccc
Q psy7433 138 VTG---AGDGDIKVWSLSGNH---LLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-R-LFSCGADGSMKVRQLPDRDAVV 209 (213)
Q Consensus 138 ~~~---~~dg~i~v~d~~~~~---~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~-l~s~~~d~~i~iw~~~~~~~~~ 209 (213)
-+| ..+..+-+||..+-+ ....+... ..|.--.++++. . .+.|-.|+.||.|++.+....+
T Consensus 232 tTGfsr~seRq~aLwdp~nl~eP~~~~elDtS-----------nGvl~PFyD~dt~ivYl~GKGD~~IRYyEit~d~P~~ 300 (472)
T KOG0303|consen 232 TTGFSRMSERQIALWDPNNLEEPIALQELDTS-----------NGVLLPFYDPDTSIVYLCGKGDSSIRYFEITNEPPFV 300 (472)
T ss_pred eeccccccccceeccCcccccCcceeEEeccC-----------CceEEeeecCCCCEEEEEecCCcceEEEEecCCCcee
Confidence 555 346789999875432 23333332 456666677764 3 4566689999999999887665
Q ss_pred cc
Q psy7433 210 HT 211 (213)
Q Consensus 210 ~~ 211 (213)
+-
T Consensus 301 hy 302 (472)
T KOG0303|consen 301 HY 302 (472)
T ss_pred EE
Confidence 43
|
|
| >KOG0301|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.6e-21 Score=148.31 Aligned_cols=180 Identities=18% Similarity=0.314 Sum_probs=154.4
Q ss_pred cccccCceEE-EEEeC-CCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEE
Q psy7433 3 YQCHNKITSD-FVFLG-SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDIC 80 (213)
Q Consensus 3 l~~h~~~v~~-~~~~~-~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 80 (213)
+++|.+-|.. +++-+ ++-.++++ +.|..|.+|.. ....++..+.+|...|.++....++. +++|+.|.+++
T Consensus 53 ~~~~~g~i~~~i~y~e~~~~~l~~g---~~D~~i~v~~~---~~~~P~~~LkgH~snVC~ls~~~~~~-~iSgSWD~Tak 125 (745)
T KOG0301|consen 53 FEGPKGFIANSICYAESDKGRLVVG---GMDTTIIVFKL---SQAEPLYTLKGHKSNVCSLSIGEDGT-LISGSWDSTAK 125 (745)
T ss_pred cccCcceeeccceeccccCcceEee---cccceEEEEec---CCCCchhhhhccccceeeeecCCcCc-eEecccccceE
Confidence 5667777777 78876 34457777 68999999998 67888999999999999998877776 99999999999
Q ss_pred EEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee---------------eceEEEEEccCCceEEEecCCCc
Q psy7433 81 VIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK---------------SPVKCLAIDPHEEFFVTGAGDGD 145 (213)
Q Consensus 81 iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~---------------~~v~~~~~~~~~~~l~~~~~dg~ 145 (213)
+|.. +++...+++|...|+++..-|++ .+++|+.|+.|+ .-|+.+++-+++. +++++.||.
T Consensus 126 vW~~--~~l~~~l~gH~asVWAv~~l~e~-~~vTgsaDKtIklWk~~~~l~tf~gHtD~VRgL~vl~~~~-flScsNDg~ 201 (745)
T KOG0301|consen 126 VWRI--GELVYSLQGHTASVWAVASLPEN-TYVTGSADKTIKLWKGGTLLKTFSGHTDCVRGLAVLDDSH-FLSCSNDGS 201 (745)
T ss_pred Eecc--hhhhcccCCcchheeeeeecCCC-cEEeccCcceeeeccCCchhhhhccchhheeeeEEecCCC-eEeecCCce
Confidence 9965 55566689999999999999988 899999999998 6788899988754 788899999
Q ss_pred EEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEe-CCCCeEEEEecCCcEEEEeCCC
Q psy7433 146 IKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHV-DGGSRLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 146 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~i~iw~~~~ 204 (213)
|+.|++ +++++..+.+|. .-|.++.. .+++.+++++.|++++||+...
T Consensus 202 Ir~w~~-~ge~l~~~~ght----------n~vYsis~~~~~~~Ivs~gEDrtlriW~~~e 250 (745)
T KOG0301|consen 202 IRLWDL-DGEVLLEMHGHT----------NFVYSISMALSDGLIVSTGEDRTLRIWKKDE 250 (745)
T ss_pred EEEEec-cCceeeeeeccc----------eEEEEEEecCCCCeEEEecCCceEEEeecCc
Confidence 999999 889999999987 67999994 4577899999999999999873
|
|
| >KOG0641|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.1e-20 Score=124.76 Aligned_cols=190 Identities=19% Similarity=0.295 Sum_probs=149.8
Q ss_pred ccccccCceEEEEEeC----CCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCC
Q psy7433 2 TYQCHNKITSDFVFLG----SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKG 77 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~----~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 77 (213)
.|.-|.+.|+.++|.. .+.+|+++| ..|..|.+-|- ..++....+.+|.+.|.++. +-++-.+++|+.|.
T Consensus 131 e~nmhdgtirdl~fld~~~s~~~il~s~g--agdc~iy~tdc---~~g~~~~a~sghtghilaly-swn~~m~~sgsqdk 204 (350)
T KOG0641|consen 131 EFNMHDGTIRDLAFLDDPESGGAILASAG--AGDCKIYITDC---GRGQGFHALSGHTGHILALY-SWNGAMFASGSQDK 204 (350)
T ss_pred eeeecCCceeeeEEecCCCcCceEEEecC--CCcceEEEeec---CCCCcceeecCCcccEEEEE-EecCcEEEccCCCc
Confidence 4667899999999975 467889887 46677777776 67778888999999887763 44688999999999
Q ss_pred cEEEEeccCceEEEeccc-------CCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccC
Q psy7433 78 DICVIDLRQRVIRSRFNA-------HESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPH 133 (213)
Q Consensus 78 ~v~iwd~~~~~~~~~~~~-------~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~ 133 (213)
+|++||++-...+..+.. ....|.+++..|.|+.|++|-.|.... ..|.|+.|+|.
T Consensus 205 tirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~ 284 (350)
T KOG0641|consen 205 TIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPG 284 (350)
T ss_pred eEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCC
Confidence 999999998877766542 135789999999999999999988654 78999999999
Q ss_pred CceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEecCCcEEEEeCC
Q psy7433 134 EEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGADGSMKVRQLP 203 (213)
Q Consensus 134 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~d~~i~iw~~~ 203 (213)
..|+++++.|..|++-|++.. ... +.+.-....|...+..+.|+|... +++.+.|.++.+|.+.
T Consensus 285 a~yllt~syd~~ikltdlqgd-la~-----el~~~vv~ehkdk~i~~rwh~~d~sfisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 285 AHYLLTCSYDMKIKLTDLQGD-LAH-----ELPIMVVAEHKDKAIQCRWHPQDFSFISSSADKTATLWALN 349 (350)
T ss_pred ceEEEEecccceEEEeecccc-hhh-----cCceEEEEeccCceEEEEecCccceeeeccCcceEEEeccC
Confidence 999999999999999998632 111 111111222236788899999765 8999999999999875
|
|
| >KOG0639|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.1e-21 Score=142.48 Aligned_cols=188 Identities=18% Similarity=0.337 Sum_probs=157.7
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccC
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQ 86 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~ 86 (213)
...|+++...|||+.|++|| .-.++.|||+..+ +......+........+++.+||.+..+++..||.|.|||+.+
T Consensus 465 dnyiRSckL~pdgrtLivGG---eastlsiWDLAap-TprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhn 540 (705)
T KOG0639|consen 465 DNYIRSCKLLPDGRTLIVGG---EASTLSIWDLAAP-TPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHN 540 (705)
T ss_pred ccceeeeEecCCCceEEecc---ccceeeeeeccCC-CcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEccc
Confidence 46799999999999999995 6889999999543 2222233433345678899999999999999999999999999
Q ss_pred ceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee----------------eceEEEEEccCCceEEEecCCCcEEEEE
Q psy7433 87 RVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWS 150 (213)
Q Consensus 87 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d 150 (213)
...++.|++|.+.+.|+..+++|..|.+|+.|.+++ ..|.++..+|.+.++++|-+++.+.|..
T Consensus 541 q~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlregrqlqqhdF~SQIfSLg~cP~~dWlavGMens~vevlh 620 (705)
T KOG0639|consen 541 QTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQHDFSSQIFSLGYCPTGDWLAVGMENSNVEVLH 620 (705)
T ss_pred ceeeecccCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhhhhhhhhhhheecccCCCccceeeecccCcEEEEe
Confidence 999999999999999999999999999999999998 8899999999999999999999998877
Q ss_pred ccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCC-CeEEEEecCCcEEEEeCCCCcccc
Q psy7433 151 LSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG-SRLFSCGADGSMKVRQLPDRDAVV 209 (213)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~d~~i~iw~~~~~~~~~ 209 (213)
....+ .+.+..|. +.|.++.|.+. .++++.+.|+.+..|...-+..+.
T Consensus 621 ~skp~-kyqlhlhe----------ScVLSlKFa~cGkwfvStGkDnlLnawrtPyGasiF 669 (705)
T KOG0639|consen 621 TSKPE-KYQLHLHE----------SCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIF 669 (705)
T ss_pred cCCcc-ceeecccc----------cEEEEEEecccCceeeecCchhhhhhccCcccccee
Confidence 65433 33444444 68999999984 569999999999999987665443
|
|
| >KOG1274|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-20 Score=147.44 Aligned_cols=160 Identities=18% Similarity=0.272 Sum_probs=135.8
Q ss_pred ccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEecc
Q psy7433 6 HNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLR 85 (213)
Q Consensus 6 h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~ 85 (213)
.+-++++++|+-+|+++|.| +.|-.|++-++ ......+.+.+|.++|.++.|+|++++||+.+.||.|++||+.
T Consensus 95 ftlp~r~~~v~g~g~~iaag---sdD~~vK~~~~---~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~ 168 (933)
T KOG1274|consen 95 FTLPIRDLAVSGSGKMIAAG---SDDTAVKLLNL---DDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQ 168 (933)
T ss_pred eeccceEEEEecCCcEEEee---cCceeEEEEec---cccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcc
Confidence 35679999999999999999 79999999998 5666777888999999999999999999999999999999999
Q ss_pred CceEEEecccC--------CCCeeEEEecCCCCEEEEecCCCcee-------------------eceEEEEEccCCceEE
Q psy7433 86 QRVIRSRFNAH--------ESPVKCLAIDPHEEFFVTGAGDGDIK-------------------SPVKCLAIDPHEEFFV 138 (213)
Q Consensus 86 ~~~~~~~~~~~--------~~~i~~~~~~~~~~~l~~~~~~~~i~-------------------~~v~~~~~~~~~~~l~ 138 (213)
++.....+.+. ...+..++|+|++..|++...++.++ ..+.++.|+|.|+|||
T Consensus 169 ~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiA 248 (933)
T KOG1274|consen 169 DGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIA 248 (933)
T ss_pred cchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCCCcEEe
Confidence 88665554321 34567899999988999999998886 4589999999999999
Q ss_pred EecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCC
Q psy7433 139 TGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG 185 (213)
Q Consensus 139 ~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 185 (213)
+++.||.|.|||..+-+. |.. ...|.+++|.|+
T Consensus 249 As~~~g~I~vWnv~t~~~------~~~--------~~~Vc~~aw~p~ 281 (933)
T KOG1274|consen 249 ASTLDGQILVWNVDTHER------HEF--------KRAVCCEAWKPN 281 (933)
T ss_pred eeccCCcEEEEecccchh------ccc--------cceeEEEecCCC
Confidence 999999999999987211 222 157999999884
|
|
| >KOG1445|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.1e-21 Score=147.18 Aligned_cols=118 Identities=18% Similarity=0.286 Sum_probs=94.7
Q ss_pred ccccccCceEEEEEeC-CCCeEEEeeccCCCccEEEEeCCCcccccc---eeeeeeecCCceEEEEecCCCEEEEEcCCC
Q psy7433 2 TYQCHNKITSDFVFLG-SCSLVATAGHSSESKNVCLWDSLLPQKKAL---VQAFVCHDQGASSLVFAPQHQLLISAGKKG 77 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~-~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 77 (213)
.|.+|...|+++.|+| ...+||++ +.|..|+||.+..+...+. ...+.+.+-.+.++.|+|...-|+..+..|
T Consensus 74 ~l~~H~d~VtDl~FspF~D~LLAT~---S~D~~VKiW~lp~g~~q~LSape~~~g~~~~~vE~l~fHpTaDgil~s~a~g 150 (1012)
T KOG1445|consen 74 ILAAHGDQVTDLGFSPFADELLATC---SRDEPVKIWKLPRGHSQKLSAPEIDVGGGNVIVECLRFHPTADGILASGAHG 150 (1012)
T ss_pred eeecccceeeccCccccchhhhhcc---cCCCeeEEEecCCCcccccCCcceeecCCceEEEEeecccCcCceEEeccCc
Confidence 3678999999999999 66688888 8999999999842211111 112223345688999999665455555679
Q ss_pred cEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee
Q psy7433 78 DICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122 (213)
Q Consensus 78 ~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~ 122 (213)
.+++||+.+++....+.+|...|.+..|+.||+.+++++.|++++
T Consensus 151 ~v~i~D~stqk~~~el~~h~d~vQSa~WseDG~llatscKdkqir 195 (1012)
T KOG1445|consen 151 SVYITDISTQKTAVELSGHTDKVQSADWSEDGKLLATSCKDKQIR 195 (1012)
T ss_pred eEEEEEcccCceeecccCCchhhhccccccCCceEeeecCCcceE
Confidence 999999999999999999999999999999999999999999886
|
|
| >KOG2055|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.9e-20 Score=133.22 Aligned_cols=185 Identities=16% Similarity=0.249 Sum_probs=152.0
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCC-EEEEEcCCCcEEEEecc
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQ-LLISAGKKGDICVIDLR 85 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~iwd~~ 85 (213)
.+.|+++.|+|....++++| .|+.++||.+.- +....+..+.-...+|.+.+|.|+|. .+++++....++.||+.
T Consensus 213 ~~~I~sv~FHp~~plllvaG---~d~~lrifqvDG-k~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle 288 (514)
T KOG2055|consen 213 HGGITSVQFHPTAPLLLVAG---LDGTLRIFQVDG-KVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLE 288 (514)
T ss_pred cCCceEEEecCCCceEEEec---CCCcEEEEEecC-ccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeecc
Confidence 46899999999999999994 899999999852 34456667766778999999999998 89999999999999998
Q ss_pred CceEEE--ecccCC-CCeeEEEecCCCCEEEEecCCCcee----------------eceEEEEEccCCceEEEecCCCcE
Q psy7433 86 QRVIRS--RFNAHE-SPVKCLAIDPHEEFFVTGAGDGDIK----------------SPVKCLAIDPHEEFFVTGAGDGDI 146 (213)
Q Consensus 86 ~~~~~~--~~~~~~-~~i~~~~~~~~~~~l~~~~~~~~i~----------------~~v~~~~~~~~~~~l~~~~~dg~i 146 (213)
+.+... ...++. ..+.....+|++++++..+..|.|. +.+..++|+.+++.|++.+.+|.|
T Consensus 289 ~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~KieG~v~~~~fsSdsk~l~~~~~~GeV 368 (514)
T KOG2055|consen 289 TAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFKIEGVVSDFTFSSDSKELLASGGTGEV 368 (514)
T ss_pred ccccccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheeeeccEEeeEEEecCCcEEEEEcCCceE
Confidence 875432 223332 3567888999999999999999886 889999999999999999999999
Q ss_pred EEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCC-CeEEEEecCCcEEEEeCCC
Q psy7433 147 KVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG-SRLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 147 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~d~~i~iw~~~~ 204 (213)
.+||++...++..+..... -.-++++.+++ .+||+|+..|.|.|||..+
T Consensus 369 ~v~nl~~~~~~~rf~D~G~---------v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s 418 (514)
T KOG2055|consen 369 YVWNLRQNSCLHRFVDDGS---------VHGTSLCISLNGSYLATGSDSGIVNIYDGNS 418 (514)
T ss_pred EEEecCCcceEEEEeecCc---------cceeeeeecCCCceEEeccCcceEEEeccch
Confidence 9999999999888876531 12345555554 4799999999999999654
|
|
| >KOG1539|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.8e-20 Score=143.62 Aligned_cols=180 Identities=14% Similarity=0.249 Sum_probs=155.7
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeee---eeecCCceEEEEecCCCEEEEEcCCCcEEEEe
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAF---VCHDQGASSLVFAPQHQLLISAGKKGDICVID 83 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd 83 (213)
...+++++.++.|++.+.| ...|.|-+|++ +.+-...++ +.|..+|+.++...-++.+++++.+|.+++||
T Consensus 448 ~~~~~av~vs~CGNF~~IG---~S~G~Id~fNm---QSGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~ 521 (910)
T KOG1539|consen 448 DINATAVCVSFCGNFVFIG---YSKGTIDRFNM---QSGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWD 521 (910)
T ss_pred CcceEEEEEeccCceEEEe---ccCCeEEEEEc---ccCeeecccccCccccCceeEEEecCCCceEEEccCcceEEEEe
Confidence 4679999999999999998 78999999999 556555565 58999999999998889999999999999999
Q ss_pred ccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCCCcE
Q psy7433 84 LRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDGDI 146 (213)
Q Consensus 84 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg~i 146 (213)
......+..+. ....+.++..+.....++.+..|-.|. ..|++++|||||++|++++.|++|
T Consensus 522 f~~k~l~~~l~-l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tI 600 (910)
T KOG1539|consen 522 FKKKVLKKSLR-LGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTI 600 (910)
T ss_pred cCCcceeeeec-cCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcE
Confidence 99888776665 456778888888777888888877765 889999999999999999999999
Q ss_pred EEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCC-CeEEEEecC-CcEEEEeCCC
Q psy7433 147 KVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG-SRLFSCGAD-GSMKVRQLPD 204 (213)
Q Consensus 147 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~d-~~i~iw~~~~ 204 (213)
++||+.++.++-.+... .+++++.++|+ ++||+...| .-|++|.-.+
T Consensus 601 r~wDlpt~~lID~~~vd-----------~~~~sls~SPngD~LAT~Hvd~~gIylWsNks 649 (910)
T KOG1539|consen 601 RTWDLPTGTLIDGLLVD-----------SPCTSLSFSPNGDFLATVHVDQNGIYLWSNKS 649 (910)
T ss_pred EEEeccCcceeeeEecC-----------CcceeeEECCCCCEEEEEEecCceEEEEEchh
Confidence 99999999999888775 58999999995 579999888 6899997544
|
|
| >KOG1539|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.5e-19 Score=140.39 Aligned_cols=115 Identities=21% Similarity=0.241 Sum_probs=88.9
Q ss_pred CccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCE-EEEEcCCCcE
Q psy7433 1 MTYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQL-LISAGKKGDI 79 (213)
Q Consensus 1 ~~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~v 79 (213)
++++++...|+++.=+|-=+.+|.| ..+|+|.++++ +..+.+.+++...+.|+.+.|..||+. |++|+..|.+
T Consensus 196 ~~f~~~~s~IT~ieqsPaLDVVaiG---~~~G~ViifNl---K~dkil~sFk~d~g~VtslSFrtDG~p~las~~~~G~m 269 (910)
T KOG1539|consen 196 YTFQEFFSRITAIEQSPALDVVAIG---LENGTVIIFNL---KFDKILMSFKQDWGRVTSLSFRTDGNPLLASGRSNGDM 269 (910)
T ss_pred EEecccccceeEeccCCcceEEEEe---ccCceEEEEEc---ccCcEEEEEEccccceeEEEeccCCCeeEEeccCCceE
Confidence 4688999999999999988899998 79999999999 677788888755689999999999864 5666677999
Q ss_pred EEEeccCceEEEecc-cCCCCeeEEEecCCCCEEEEecCCCce
Q psy7433 80 CVIDLRQRVIRSRFN-AHESPVKCLAIDPHEEFFVTGAGDGDI 121 (213)
Q Consensus 80 ~iwd~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~~~~i 121 (213)
.+||++..+....+. .|.+.+....|.|....+++++.|..+
T Consensus 270 ~~wDLe~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSl 312 (910)
T KOG1539|consen 270 AFWDLEKKKLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSL 312 (910)
T ss_pred EEEEcCCCeeeeeeeccccCCcccceecCCCceEeeccCCCce
Confidence 999998776554443 455556666666655555555555544
|
|
| >KOG1036|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.6e-20 Score=128.95 Aligned_cols=171 Identities=19% Similarity=0.304 Sum_probs=137.2
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEE
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVI 82 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iw 82 (213)
+..|.++|+||..++....++++ ++|++|++||.+ .......+. ....|.++.. .++.|+.|..+..+.+|
T Consensus 90 igth~~~i~ci~~~~~~~~vIsg---sWD~~ik~wD~R---~~~~~~~~d-~~kkVy~~~v--~g~~LvVg~~~r~v~iy 160 (323)
T KOG1036|consen 90 IGTHDEGIRCIEYSYEVGCVISG---SWDKTIKFWDPR---NKVVVGTFD-QGKKVYCMDV--SGNRLVVGTSDRKVLIY 160 (323)
T ss_pred eccCCCceEEEEeeccCCeEEEc---ccCccEEEEecc---ccccccccc-cCceEEEEec--cCCEEEEeecCceEEEE
Confidence 55799999999999988889998 799999999985 233333332 2335666655 57899999999999999
Q ss_pred eccCceEEEeccc--CCCCeeEEEecCCCCEEEEecCCCcee------------------------------eceEEEEE
Q psy7433 83 DLRQRVIRSRFNA--HESPVKCLAIDPHEEFFVTGAGDGDIK------------------------------SPVKCLAI 130 (213)
Q Consensus 83 d~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------------------~~v~~~~~ 130 (213)
|+++.....+... ..-+++|+++-|++.-+++++-+|.+. .+|++|+|
T Consensus 161 DLRn~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~F 240 (323)
T KOG1036|consen 161 DLRNLDEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAF 240 (323)
T ss_pred EcccccchhhhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEe
Confidence 9998654432221 334689999999888899999999885 89999999
Q ss_pred ccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEe
Q psy7433 131 DPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCG 192 (213)
Q Consensus 131 ~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~ 192 (213)
+|-...|++|+.||.|.+||+.+.+.+..+.... ..|.+++|+.++ .||.++
T Consensus 241 hp~~~tfaTgGsDG~V~~Wd~~~rKrl~q~~~~~----------~SI~slsfs~dG~~LAia~ 293 (323)
T KOG1036|consen 241 HPIHGTFATGGSDGIVNIWDLFNRKRLKQLAKYE----------TSISSLSFSMDGSLLAIAS 293 (323)
T ss_pred ccccceEEecCCCceEEEccCcchhhhhhccCCC----------CceEEEEeccCCCeEEEEe
Confidence 9999999999999999999999988888887654 579999999865 466665
|
|
| >KOG0307|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.3e-21 Score=154.57 Aligned_cols=191 Identities=17% Similarity=0.258 Sum_probs=155.5
Q ss_pred ccccccCceEEEEEeCCCC-eEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec-CCCEEEEEcCCCcE
Q psy7433 2 TYQCHNKITSDFVFLGSCS-LVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP-QHQLLISAGKKGDI 79 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~-~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v 79 (213)
++..|++.|+.+.|++... .||+| ..+|.|.|||+++.++..... -....+.|.+++|+. ....|++++.+|.+
T Consensus 111 ~~~~h~G~V~gLDfN~~q~nlLASG---a~~geI~iWDlnn~~tP~~~~-~~~~~~eI~~lsWNrkvqhILAS~s~sg~~ 186 (1049)
T KOG0307|consen 111 TKSKHTGPVLGLDFNPFQGNLLASG---ADDGEILIWDLNKPETPFTPG-SQAPPSEIKCLSWNRKVSHILASGSPSGRA 186 (1049)
T ss_pred hhcccCCceeeeeccccCCceeecc---CCCCcEEEeccCCcCCCCCCC-CCCCcccceEeccchhhhHHhhccCCCCCc
Confidence 4678999999999999555 88888 799999999996433322221 222457899999997 45688999999999
Q ss_pred EEEeccCceEEEecccCCC--CeeEEEecCCC-CEEEEecCCCcee---------------------eceEEEEEccCC-
Q psy7433 80 CVIDLRQRVIRSRFNAHES--PVKCLAIDPHE-EFFVTGAGDGDIK---------------------SPVKCLAIDPHE- 134 (213)
Q Consensus 80 ~iwd~~~~~~~~~~~~~~~--~i~~~~~~~~~-~~l~~~~~~~~i~---------------------~~v~~~~~~~~~- 134 (213)
.|||++..+++..+..+.. .+..++|+|+. ..+++++.|...- ..|.+|.|++.+
T Consensus 187 ~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~ 266 (1049)
T KOG0307|consen 187 VIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDP 266 (1049)
T ss_pred eeccccCCCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCc
Confidence 9999999888877765544 47899999975 4677777766432 789999999976
Q ss_pred ceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCC--CeEEEEecCCcEEEEeCCCCc
Q psy7433 135 EFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG--SRLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 135 ~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~l~s~~~d~~i~iw~~~~~~ 206 (213)
+++++++.|+.|.+|+.++++.+..+.... ..+..+.|+|. +.++..+.||.|.|+.+.+..
T Consensus 267 ~lllSsgkD~~ii~wN~~tgEvl~~~p~~~----------nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~~~~ 330 (1049)
T KOG0307|consen 267 RLLLSSGKDNRIICWNPNTGEVLGELPAQG----------NWCFDVQWCPRNPSVMAAASFDGKISIYSLQGTD 330 (1049)
T ss_pred hhhhcccCCCCeeEecCCCceEeeecCCCC----------cceeeeeecCCCcchhhhheeccceeeeeeecCC
Confidence 799999999999999999999999998754 78999999983 478999999999999997654
|
|
| >KOG2055|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.1e-20 Score=134.47 Aligned_cols=182 Identities=19% Similarity=0.346 Sum_probs=153.6
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCc
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR 87 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~ 87 (213)
..+....++|++++|+..| ..|.|.+... .++..+.+++ -++.|..++|+.+++.|++++.+|.|.+||+++.
T Consensus 304 ~~~e~FeVShd~~fia~~G---~~G~I~lLha---kT~eli~s~K-ieG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~ 376 (514)
T KOG2055|consen 304 KSMERFEVSHDSNFIAIAG---NNGHIHLLHA---KTKELITSFK-IEGVVSDFTFSSDSKELLASGGTGEVYVWNLRQN 376 (514)
T ss_pred chhheeEecCCCCeEEEcc---cCceEEeehh---hhhhhhheee-eccEEeeEEEecCCcEEEEEcCCceEEEEecCCc
Confidence 4577888999999999995 8999999997 6777777776 4677999999999999999999999999999999
Q ss_pred eEEEecccCCC-CeeEEEecCCCCEEEEecCCCcee-----------------------eceEEEEEccCCceEEEecC-
Q psy7433 88 VIRSRFNAHES-PVKCLAIDPHEEFFVTGAGDGDIK-----------------------SPVKCLAIDPHEEFFVTGAG- 142 (213)
Q Consensus 88 ~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~~~~~i~-----------------------~~v~~~~~~~~~~~l~~~~~- 142 (213)
.+++.+....+ .-++++.++++.+||+|+..|.+. ..|++|.|+|++++|+.+|.
T Consensus 377 ~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~~ 456 (514)
T KOG2055|consen 377 SCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQILAIASRV 456 (514)
T ss_pred ceEEEEeecCccceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcchhhhhhhhhc
Confidence 98888874332 245777788999999999999875 78999999999999888875
Q ss_pred -CCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCC-CCeEEEEecCCcEEEEeCC
Q psy7433 143 -DGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG-GSRLFSCGADGSMKVRQLP 203 (213)
Q Consensus 143 -dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~s~~~d~~i~iw~~~ 203 (213)
+..+++-.+.+......++...... +.|+|++|+| +++||.|..+|.+.+|.+.
T Consensus 457 ~knalrLVHvPS~TVFsNfP~~n~~v-------g~vtc~aFSP~sG~lAvGNe~grv~l~kL~ 512 (514)
T KOG2055|consen 457 KKNALRLVHVPSCTVFSNFPTSNTKV-------GHVTCMAFSPNSGYLAVGNEAGRVHLFKLH 512 (514)
T ss_pred cccceEEEeccceeeeccCCCCCCcc-------cceEEEEecCCCceEEeecCCCceeeEeec
Confidence 4678998888777777776654332 6799999999 6799999999999999874
|
|
| >KOG1063|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.2e-20 Score=142.26 Aligned_cols=199 Identities=20% Similarity=0.286 Sum_probs=151.6
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccC--CCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSS--ESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDI 79 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s--~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v 79 (213)
.|-||.-.|++++.+|+++++|++-.++ ....|++|+. .....+..+.+|.-.|+.++||||+++|++.+.|+++
T Consensus 520 KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t---~~W~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~ 596 (764)
T KOG1063|consen 520 KLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNT---ANWLQVQELEGHSLTVTRLAFSPDGRYLLSVSRDRTV 596 (764)
T ss_pred HhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEec---cchhhhheecccceEEEEEEECCCCcEEEEeecCceE
Confidence 4679999999999999999999983211 2356999998 6677777899999999999999999999999999999
Q ss_pred EEEeccCce----EEEecccCCCCeeEEEecCCCCEEEEecCCCcee---------------------eceEEEEEccC-
Q psy7433 80 CVIDLRQRV----IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK---------------------SPVKCLAIDPH- 133 (213)
Q Consensus 80 ~iwd~~~~~----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~---------------------~~v~~~~~~~~- 133 (213)
.+|...... .....+.|..-|+...|+|++.+|+|++.|+.++ ..|+.++|.|-
T Consensus 597 sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~~d~~i~~~a~~~~~~aVTAv~~~~~~ 676 (764)
T KOG1063|consen 597 SLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDLRDKYISRFACLKFSLAVTAVAYLPVD 676 (764)
T ss_pred EeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccCchhhhhhhhchhccCCceeeEEeeccc
Confidence 999885431 1223567888999999999999999999999987 67888888773
Q ss_pred ----CceEEEecCCCcEEEEEccCCeeeeeecCC--CCceeEEEecCCCeEEEEeCCC---------C--eEEEEecCCc
Q psy7433 134 ----EEFFVTGAGDGDIKVWSLSGNHLLYNFPGE--HARSSFFKHIGQGVTQLHVDGG---------S--RLFSCGADGS 196 (213)
Q Consensus 134 ----~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~---------~--~l~s~~~d~~ 196 (213)
+..+++|-+.|.|.+|....-....+...+ .........+...|+.+.|.|- + .|++++.|..
T Consensus 677 ~~e~~~~vavGle~GeI~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~aV~rl~w~p~~~~~~~~~~~~l~la~~g~D~~ 756 (764)
T KOG1063|consen 677 HNEKGDVVAVGLEKGEIVLWRRKREHRQVTVGTFNLDTRLCATIGPDSAVNRLLWRPTCSDDWVEDKEWLNLAVGGDDES 756 (764)
T ss_pred cccccceEEEEecccEEEEEecccccccccceeeeeccccccccChHHhhheeEeccccccccccccceeEEeeecccce
Confidence 237889999999999986421111111100 0111112223367999999862 1 2799999999
Q ss_pred EEEEeCC
Q psy7433 197 MKVRQLP 203 (213)
Q Consensus 197 i~iw~~~ 203 (213)
++++++.
T Consensus 757 vri~nv~ 763 (764)
T KOG1063|consen 757 VRIFNVD 763 (764)
T ss_pred eEEeecc
Confidence 9999875
|
|
| >KOG1523|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=6e-20 Score=128.63 Aligned_cols=199 Identities=16% Similarity=0.180 Sum_probs=157.9
Q ss_pred ccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEecc
Q psy7433 6 HNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLR 85 (213)
Q Consensus 6 h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~ 85 (213)
-.++|+|.+|++|+..+|.+ ..+..|.||........+...+++.|+..|+.+.|+|..+.|++++.|..-++|...
T Consensus 9 ~~~pitchAwn~drt~iAv~---~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~ 85 (361)
T KOG1523|consen 9 LLEPITCHAWNSDRTQIAVS---PNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQP 85 (361)
T ss_pred ccCceeeeeecCCCceEEec---cCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccC
Confidence 45789999999999999999 788899999986544467888999999999999999999999999999999999984
Q ss_pred Cc---eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee---------------------eceEEEEEccCCceEEEec
Q psy7433 86 QR---VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK---------------------SPVKCLAIDPHEEFFVTGA 141 (213)
Q Consensus 86 ~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~---------------------~~v~~~~~~~~~~~l~~~~ 141 (213)
.+ ++...+..+....+++.|+|.++.|++++....+. +.|++++|+|++-++++|+
T Consensus 86 ~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaGs 165 (361)
T KOG1523|consen 86 SGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGS 165 (361)
T ss_pred CCCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceecccc
Confidence 43 34444555788999999999999999999988764 7889999999999999999
Q ss_pred CCCcEEEEEccCCeeeee----ecCCCCce----eEEEecCCCeEEEEeCCC-CeEEEEecCCcEEEEeCCCCcc
Q psy7433 142 GDGDIKVWSLSGNHLLYN----FPGEHARS----SFFKHIGQGVTQLHVDGG-SRLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 142 ~dg~i~v~d~~~~~~~~~----~~~~~~~~----~~~~~~~~~v~~~~~~~~-~~l~s~~~d~~i~iw~~~~~~~ 207 (213)
.|+..+||..--...... --+...+. ..+...++.+..+.|+|. ++|+=.+.|..+.+=|.....+
T Consensus 166 ~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~~ 240 (361)
T KOG1523|consen 166 TDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPSE 240 (361)
T ss_pred cCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCCceEEeecCCCch
Confidence 999999997621111000 00000000 011234588999999985 5799999999999988876653
|
|
| >KOG1273|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.4e-19 Score=125.62 Aligned_cols=188 Identities=18% Similarity=0.262 Sum_probs=150.3
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeee---------eec-----------------
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV---------CHD----------------- 55 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~---------~~~----------------- 55 (213)
+|.+|..+|.+++|+++|+.|+|+ |.|..|.+||+..+ .+++.+. -|.
T Consensus 60 ~lsaH~~pi~sl~WS~dgr~Llts---S~D~si~lwDl~~g---s~l~rirf~spv~~~q~hp~k~n~~va~~~~~sp~v 133 (405)
T KOG1273|consen 60 MLSAHVRPITSLCWSRDGRKLLTS---SRDWSIKLWDLLKG---SPLKRIRFDSPVWGAQWHPRKRNKCVATIMEESPVV 133 (405)
T ss_pred hhhccccceeEEEecCCCCEeeee---cCCceeEEEeccCC---CceeEEEccCccceeeeccccCCeEEEEEecCCcEE
Confidence 577999999999999999999999 89999999999533 2222211 000
Q ss_pred --------------------CCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCC-CCeeEEEecCCCCEEEE
Q psy7433 56 --------------------QGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHE-SPVKCLAIDPHEEFFVT 114 (213)
Q Consensus 56 --------------------~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~ 114 (213)
....+..|.+.|+++++|...|.+.++|..+.+++..++-.. ..|.++.++..++.|+.
T Consensus 134 i~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~t~e~vas~rits~~~IK~I~~s~~g~~lii 213 (405)
T KOG1273|consen 134 IDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAETLECVASFRITSVQAIKQIIVSRKGRFLII 213 (405)
T ss_pred EEecCCceeeccCCCccccccccccccccCCCCEEEEecCcceEEEEecchheeeeeeeechheeeeEEEEeccCcEEEE
Confidence 011222467788899999999999999999999988887655 78999999999999999
Q ss_pred ecCCCcee----------------------------eceEEEEEccCCceEEEecC-CCcEEEEEccCCeeeeeecCCCC
Q psy7433 115 GAGDGDIK----------------------------SPVKCLAIDPHEEFFVTGAG-DGDIKVWSLSGNHLLYNFPGEHA 165 (213)
Q Consensus 115 ~~~~~~i~----------------------------~~v~~~~~~~~~~~l~~~~~-dg~i~v~d~~~~~~~~~~~~~~~ 165 (213)
-+.|..|+ ..-.+++|+.+|.|+++++. ...++||.-..|..+..+.+..
T Consensus 214 NtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~ccfs~dgeYv~a~s~~aHaLYIWE~~~GsLVKILhG~k- 292 (405)
T KOG1273|consen 214 NTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKKCCFSGDGEYVCAGSARAHALYIWEKSIGSLVKILHGTK- 292 (405)
T ss_pred ecCCceEEEEehhhhcccCccCCcChhHHHHHHHhhhhhhheeecCCccEEEeccccceeEEEEecCCcceeeeecCCc-
Confidence 99999887 45678899999999888875 4679999999999999998865
Q ss_pred ceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCC
Q psy7433 166 RSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 166 ~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~ 205 (213)
+.....+.|+|-. .+++. ..|.+++|.....
T Consensus 293 --------gE~l~DV~whp~rp~i~si-~sg~v~iw~~~~~ 324 (405)
T KOG1273|consen 293 --------GEELLDVNWHPVRPIIASI-ASGVVYIWAVVQV 324 (405)
T ss_pred --------hhheeecccccceeeeeec-cCCceEEEEeecc
Confidence 2467788999854 45555 8889999987643
|
|
| >KOG0771|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.6e-20 Score=133.18 Aligned_cols=178 Identities=19% Similarity=0.257 Sum_probs=140.8
Q ss_pred EEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEE
Q psy7433 11 SDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIR 90 (213)
Q Consensus 11 ~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~ 90 (213)
.+++|+++|..++++ ..||.+|+|++ .....+.....|..+|.++.|+|||+.|++.+.| ..++|+++++..+
T Consensus 148 k~vaf~~~gs~latg---g~dg~lRv~~~---Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~ 220 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATG---GTDGTLRVWEW---PSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAAL 220 (398)
T ss_pred eEEEEcCCCCEeeec---cccceEEEEec---CcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchh
Confidence 678999999999999 58999999998 4555666667789999999999999999999999 9999999999666
Q ss_pred Eeccc--CCCCeeEEEecCCC---CEEE--EecCCCcee----------------------eceEEEEEccCCceEEEec
Q psy7433 91 SRFNA--HESPVKCLAIDPHE---EFFV--TGAGDGDIK----------------------SPVKCLAIDPHEEFFVTGA 141 (213)
Q Consensus 91 ~~~~~--~~~~i~~~~~~~~~---~~l~--~~~~~~~i~----------------------~~v~~~~~~~~~~~l~~~~ 141 (213)
..... .+.....+.|+.++ .+++ .....+.+. ..|++|+.+++|++++.|+
T Consensus 221 a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT 300 (398)
T KOG0771|consen 221 ARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGT 300 (398)
T ss_pred hhcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEec
Confidence 55442 22345566666655 2222 222222222 5899999999999999999
Q ss_pred CCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCC
Q psy7433 142 GDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 142 ~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~ 204 (213)
.||.|.|++..+.+.++..+..+ ...|+.+.|+|+. ++++.+.|....+..+.-
T Consensus 301 ~dGsVai~~~~~lq~~~~vk~aH---------~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~v 355 (398)
T KOG0771|consen 301 MDGSVAIYDAKSLQRLQYVKEAH---------LGFVTGLTFSPDSRYLASVSSDNEAAVTKLAV 355 (398)
T ss_pred cCCcEEEEEeceeeeeEeehhhh---------eeeeeeEEEcCCcCcccccccCCceeEEEEee
Confidence 99999999998888877776544 3689999999975 588888998888887765
|
|
| >KOG1009|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.5e-20 Score=132.78 Aligned_cols=115 Identities=18% Similarity=0.332 Sum_probs=101.8
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCC--------C-----cccccceeeeeeecCCceEEEEecCCC
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSL--------L-----PQKKALVQAFVCHDQGASSLVFAPQHQ 68 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~--------~-----~~~~~~~~~~~~~~~~v~~~~~~~~~~ 68 (213)
.|..|++.|+++.|+|+|++||+| +.+|.|.+|... . .+.....+.+.+|...+..++|+|+++
T Consensus 60 ~Ls~H~~aVN~vRf~p~gelLASg---~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~ 136 (434)
T KOG1009|consen 60 SLSRHTRAVNVVRFSPDGELLASG---GDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSN 136 (434)
T ss_pred cccCCcceeEEEEEcCCcCeeeec---CCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCc
Confidence 467899999999999999999999 689999999764 1 122445566778999999999999999
Q ss_pred EEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCC
Q psy7433 69 LLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDG 119 (213)
Q Consensus 69 ~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~ 119 (213)
.+++++.|..+++||+..|+....+..|...+..++|.|-++++++-+.|.
T Consensus 137 ~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl~qyv~s~s~dr 187 (434)
T KOG1009|consen 137 FLVSGSVDNSVRLWDVHAGQLLAILDDHEHYVQGVAWDPLNQYVASKSSDR 187 (434)
T ss_pred eeeeeeccceEEEEEeccceeEeeccccccccceeecchhhhhhhhhccCc
Confidence 999999999999999999999999999999999999999888888877776
|
|
| >KOG1310|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.7e-20 Score=137.68 Aligned_cols=203 Identities=19% Similarity=0.315 Sum_probs=150.4
Q ss_pred CccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceee-eeeecCCceEEEEec--CCCEEEEEcCCC
Q psy7433 1 MTYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQA-FVCHDQGASSLVFAP--QHQLLISAGKKG 77 (213)
Q Consensus 1 ~~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~-~~~~~~~v~~~~~~~--~~~~l~~~~~d~ 77 (213)
+.|.||++.|+|++|+.+|.+|++| |.|-.+.|||. ...+.+.. -.+|...|.+++|-| +..++++|..|.
T Consensus 44 ~eL~GH~GCVN~LeWn~dG~lL~SG---SDD~r~ivWd~---~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk 117 (758)
T KOG1310|consen 44 AELTGHTGCVNCLEWNADGELLASG---SDDTRLIVWDP---FEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDK 117 (758)
T ss_pred hhhccccceecceeecCCCCEEeec---CCcceEEeecc---hhcceeeeeecccccceeEEeeeccCCCeEEEeccCcc
Confidence 4689999999999999999999999 89999999998 34444443 458999999999999 556889999999
Q ss_pred cEEEEeccCc----------eEEEecccCCCCeeEEEecCCC-CEEEEecCCCcee------------------------
Q psy7433 78 DICVIDLRQR----------VIRSRFNAHESPVKCLAIDPHE-EFFVTGAGDGDIK------------------------ 122 (213)
Q Consensus 78 ~v~iwd~~~~----------~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~~~~i~------------------------ 122 (213)
.|+++|+... +....+..|...|..++..|++ ..|.++++||.++
T Consensus 118 ~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~ 197 (758)
T KOG1310|consen 118 LIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYN 197 (758)
T ss_pred eEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhc
Confidence 9999999752 3344556688889999999988 7899999999997
Q ss_pred ---eceEEEEEccCCc-eEEEecCCCcEEEEEccCCee------------------eeeecCCCCceeE--EEecCCCeE
Q psy7433 123 ---SPVKCLAIDPHEE-FFVTGAGDGDIKVWSLSGNHL------------------LYNFPGEHARSSF--FKHIGQGVT 178 (213)
Q Consensus 123 ---~~v~~~~~~~~~~-~l~~~~~dg~i~v~d~~~~~~------------------~~~~~~~~~~~~~--~~~~~~~v~ 178 (213)
-...|+..+|... +|++|+.|--.++||.|...+ +..+...+..... ....-..++
T Consensus 198 ~~lielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~gn~~~~~~~~t 277 (758)
T KOG1310|consen 198 PQLIELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQGNLDRYITCCT 277 (758)
T ss_pred hhhheeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCcccccccceeeeE
Confidence 4668899999765 899999999999999642211 1111111100000 000012367
Q ss_pred EEEeCCCCe--EEEEecCCcEEEEeCCCCccccc
Q psy7433 179 QLHVDGGSR--LFSCGADGSMKVRQLPDRDAVVH 210 (213)
Q Consensus 179 ~~~~~~~~~--l~s~~~d~~i~iw~~~~~~~~~~ 210 (213)
-+.|+|++. |++-+.+ .|+++|+..++.+..
T Consensus 278 ~vtfnpNGtElLvs~~gE-hVYlfdvn~~~~~~~ 310 (758)
T KOG1310|consen 278 YVTFNPNGTELLVSWGGE-HVYLFDVNEDKSPTP 310 (758)
T ss_pred EEEECCCCcEEEEeeCCe-EEEEEeecCCCCcee
Confidence 778899754 5555444 799999998876543
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.3e-18 Score=127.96 Aligned_cols=189 Identities=10% Similarity=0.154 Sum_probs=133.3
Q ss_pred ceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEE-cCCCcEEEEeccCc
Q psy7433 9 ITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISA-GKKGDICVIDLRQR 87 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~v~iwd~~~~ 87 (213)
.+.+++|+|+++.+++++ ..++.|++||.. ..+.+..+..+. .+..++|+|+++.++++ +.++.+++||+++.
T Consensus 32 ~~~~l~~~~dg~~l~~~~--~~~~~v~~~d~~---~~~~~~~~~~~~-~~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~ 105 (300)
T TIGR03866 32 RPRGITLSKDGKLLYVCA--SDSDTIQVIDLA---TGEVIGTLPSGP-DPELFALHPNGKILYIANEDDNLVTVIDIETR 105 (300)
T ss_pred CCCceEECCCCCEEEEEE--CCCCeEEEEECC---CCcEEEeccCCC-CccEEEECCCCCEEEEEcCCCCeEEEEECCCC
Confidence 467899999999774432 578999999983 444555554433 35778999999877654 56899999999988
Q ss_pred eEEEecccCCCCeeEEEecCCCCEEEEecCCCce-e----------------eceEEEEEccCCceEEEe-cCCCcEEEE
Q psy7433 88 VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI-K----------------SPVKCLAIDPHEEFFVTG-AGDGDIKVW 149 (213)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i-~----------------~~v~~~~~~~~~~~l~~~-~~dg~i~v~ 149 (213)
+.+..+.. ...+.+++|+|+++.++++..++.. . ..+..++|+|++++++++ ..++.|++|
T Consensus 106 ~~~~~~~~-~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~i~ 184 (300)
T TIGR03866 106 KVLAEIPV-GVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDNVLVDQRPRFAEFTADGKELWVSSEIGGTVSVI 184 (300)
T ss_pred eEEeEeeC-CCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEEEEcCCCccEEEECCCCCEEEEEcCCCCEEEEE
Confidence 77776653 3456889999999999988876532 1 245678999999977554 468999999
Q ss_pred EccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe--EEEEecCCcEEEEeCCCCcc
Q psy7433 150 SLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR--LFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 150 d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--l~s~~~d~~i~iw~~~~~~~ 207 (213)
|+++++.+..+..+.... .........+.++|++. +++.+.++.+.+||+.+.+.
T Consensus 185 d~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~~ 241 (300)
T TIGR03866 185 DVATRKVIKKITFEIPGV---HPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKTYEV 241 (300)
T ss_pred EcCcceeeeeeeeccccc---ccccCCccceEECCCCCEEEEEcCCCCeEEEEECCCCcE
Confidence 999887766654321000 00012345688898764 34455677899999987643
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >KOG1963|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.9e-19 Score=138.62 Aligned_cols=114 Identities=15% Similarity=0.284 Sum_probs=98.0
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCC-cccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEe
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLL-PQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVID 83 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd 83 (213)
.|...+++.+++|+++++|++ ..||.|.+|.-.. .........+.-|..+|.++.|+++|.+|++|+..|.+.+|.
T Consensus 203 ~Htf~~t~~~~spn~~~~Aa~---d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq 279 (792)
T KOG1963|consen 203 HHTFNITCVALSPNERYLAAG---DSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQ 279 (792)
T ss_pred hhcccceeEEeccccceEEEe---ccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEe
Confidence 467778999999999999999 7899999997422 223345566778999999999999999999999999999999
Q ss_pred ccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee
Q psy7433 84 LRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122 (213)
Q Consensus 84 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~ 122 (213)
+.+++ .+-++.-.++|..+.++||+...++..+|..+.
T Consensus 280 ~~T~~-kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~ 317 (792)
T KOG1963|consen 280 LETGK-KQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIH 317 (792)
T ss_pred ecCCC-cccccccCCeeEEEEEcCCCCeEEEEecCceEE
Confidence 99988 556677889999999999999999999998774
|
|
| >KOG1034|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.3e-19 Score=126.16 Aligned_cols=185 Identities=18% Similarity=0.240 Sum_probs=151.5
Q ss_pred cccCceEEEEEeCC----CCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecC-CCEEEEEcCCCcE
Q psy7433 5 CHNKITSDFVFLGS----CSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQ-HQLLISAGKKGDI 79 (213)
Q Consensus 5 ~h~~~v~~~~~~~~----~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~v 79 (213)
.|.+....++|+-+ ..++|.+| .-|.|+|.|+ .+.++.+.+.+|...|+.+++.|+ .+++++++.|-.|
T Consensus 87 d~~Esfytcsw~yd~~~~~p~la~~G---~~GvIrVid~---~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~sv 160 (385)
T KOG1034|consen 87 DHDESFYTCSWSYDSNTGNPFLAAGG---YLGVIRVIDV---VSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSV 160 (385)
T ss_pred CCCcceEEEEEEecCCCCCeeEEeec---ceeEEEEEec---chhhhccceeccCccchhhhcCCCCCcEEEEecCCceE
Confidence 36777888888763 44788884 7899999999 788899999999999999999994 5899999999999
Q ss_pred EEEeccCceEEEec---ccCCCCeeEEEecCCCCEEEEecCCCcee----------------------------------
Q psy7433 80 CVIDLRQRVIRSRF---NAHESPVKCLAIDPHEEFFVTGAGDGDIK---------------------------------- 122 (213)
Q Consensus 80 ~iwd~~~~~~~~~~---~~~~~~i~~~~~~~~~~~l~~~~~~~~i~---------------------------------- 122 (213)
++|++++..++..+ .+|.+.|.++.|++++.++++++.|.+++
T Consensus 161 RlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~ 240 (385)
T KOG1034|consen 161 RLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTH 240 (385)
T ss_pred EEEeccCCeEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccc
Confidence 99999999888776 45889999999999999999999999886
Q ss_pred -------------------------------------------------------------------eceEEEEEccCCc
Q psy7433 123 -------------------------------------------------------------------SPVKCLAIDPHEE 135 (213)
Q Consensus 123 -------------------------------------------------------------------~~v~~~~~~~~~~ 135 (213)
......+|+|-++
T Consensus 241 fp~fst~diHrnyVDCvrw~gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~ 320 (385)
T KOG1034|consen 241 FPDFSTTDIHRNYVDCVRWFGDFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQK 320 (385)
T ss_pred cccccccccccchHHHHHHHhhheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHH
Confidence 1234456667788
Q ss_pred eEEEecCCCcEEEEEccCCeee--eeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEecCCcEEEEeCC
Q psy7433 136 FFVTGAGDGDIKVWSLSGNHLL--YNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGADGSMKVRQLP 203 (213)
Q Consensus 136 ~l~~~~~dg~i~v~d~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~d~~i~iw~~~ 203 (213)
+|+.|.+.|.+.+||++..++. .++..+ ..+..|...+|+.++. |+....|+.|--||..
T Consensus 321 ~la~gnq~g~v~vwdL~~~ep~~~ttl~~s--------~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwdrv 383 (385)
T KOG1034|consen 321 MLALGNQSGKVYVWDLDNNEPPKCTTLTHS--------KSGSTVRQTSFSRDGSILVLVCDDGTVWRWDRV 383 (385)
T ss_pred HHhhccCCCcEEEEECCCCCCccCceEEec--------cccceeeeeeecccCcEEEEEeCCCcEEEEEee
Confidence 9999999999999999866552 122111 1236899999998765 7888899999999864
|
|
| >KOG0307|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.1e-20 Score=150.71 Aligned_cols=188 Identities=22% Similarity=0.302 Sum_probs=146.0
Q ss_pred cCceEEEEEeCCCCe----EEEeeccCCCccEEEEeCCC---cccccceeeeeeecCCceEEEEec-CCCEEEEEcCCCc
Q psy7433 7 NKITSDFVFLGSCSL----VATAGHSSESKNVCLWDSLL---PQKKALVQAFVCHDQGASSLVFAP-QHQLLISAGKKGD 78 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~----l~~~g~~s~~~~i~iwd~~~---~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~ 78 (213)
..+.+.++|.+.+.. ||.| ..||.|.+||... +.....+.+...|.+.|..+.|++ .++.||+|+.||.
T Consensus 64 ~~rF~kL~W~~~g~~~~GlIaGG---~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~ge 140 (1049)
T KOG0307|consen 64 SNRFNKLAWGSYGSHSHGLIAGG---LEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGE 140 (1049)
T ss_pred cccceeeeecccCCCccceeecc---ccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCc
Confidence 356788999997776 5655 6999999999853 334467777888999999999999 5569999999999
Q ss_pred EEEEeccCceEEEec--ccCCCCeeEEEecCCC-CEEEEecCCCcee-------------------eceEEEEEccCCc-
Q psy7433 79 ICVIDLRQRVIRSRF--NAHESPVKCLAIDPHE-EFFVTGAGDGDIK-------------------SPVKCLAIDPHEE- 135 (213)
Q Consensus 79 v~iwd~~~~~~~~~~--~~~~~~i~~~~~~~~~-~~l~~~~~~~~i~-------------------~~v~~~~~~~~~~- 135 (213)
|.|||+...+..... ....+.|.+++|+..- ..|++++.++... ..+..++|+|+..
T Consensus 141 I~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aT 220 (1049)
T KOG0307|consen 141 ILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHAT 220 (1049)
T ss_pred EEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCce
Confidence 999999875433332 1245679999999854 4677777776543 3477999999865
Q ss_pred eEEEecCC---CcEEEEEccC-CeeeeeecCCCCceeEEEecCCCeEEEEeCC-C-CeEEEEecCCcEEEEeCCCCcc
Q psy7433 136 FFVTGAGD---GDIKVWSLSG-NHLLYNFPGEHARSSFFKHIGQGVTQLHVDG-G-SRLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 136 ~l~~~~~d---g~i~v~d~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~-~~l~s~~~d~~i~iw~~~~~~~ 207 (213)
.++++++| -.|.+||+|. ..++..+++|. ..|.++.|++ | .+|++++.|+.|.+|+..+++.
T Consensus 221 ql~~As~dd~~PviqlWDlR~assP~k~~~~H~----------~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEv 288 (1049)
T KOG0307|consen 221 QLLVASGDDSAPVIQLWDLRFASSPLKILEGHQ----------RGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEV 288 (1049)
T ss_pred eeeeecCCCCCceeEeecccccCCchhhhcccc----------cceeeeccCCCCchhhhcccCCCCeeEecCCCceE
Confidence 56666655 3699999984 45667777776 6899999998 4 4689999999999999999754
|
|
| >KOG0321|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=3e-19 Score=135.11 Aligned_cols=197 Identities=19% Similarity=0.304 Sum_probs=143.8
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceee--eeeecCCceEEEEec-CCCEEEEEcCCCcE
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQA--FVCHDQGASSLVFAP-QHQLLISAGKKGDI 79 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~--~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v 79 (213)
..+|...|.++.|.|....|++. +.|.++++||+ +...++.. +.+|...|.+++|.| +...+++|+.||.|
T Consensus 96 ~~aH~nAifDl~wapge~~lVsa---sGDsT~r~Wdv---k~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~i 169 (720)
T KOG0321|consen 96 PLAHKNAIFDLKWAPGESLLVSA---SGDSTIRPWDV---KTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEI 169 (720)
T ss_pred cccccceeEeeccCCCceeEEEc---cCCceeeeeee---ccceeecceeecccccccchhhhccCCCcceeeccCCCcE
Confidence 45799999999999977788888 89999999999 44555544 789999999999999 55788999999999
Q ss_pred EEEeccCceE--------------------E-------EecccCCCCeeE---EEecCCCCEEEEecC-CCcee------
Q psy7433 80 CVIDLRQRVI--------------------R-------SRFNAHESPVKC---LAIDPHEEFFVTGAG-DGDIK------ 122 (213)
Q Consensus 80 ~iwd~~~~~~--------------------~-------~~~~~~~~~i~~---~~~~~~~~~l~~~~~-~~~i~------ 122 (213)
.|||++-... . ..-..+...|.+ +.+..|...|++++. |+.++
T Consensus 170 llWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk 249 (720)
T KOG0321|consen 170 LLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRK 249 (720)
T ss_pred EEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecc
Confidence 9999974320 0 001112233444 455567888999888 88886
Q ss_pred ----------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCe--eeeeecC----------------
Q psy7433 123 ----------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNH--LLYNFPG---------------- 162 (213)
Q Consensus 123 ----------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~--~~~~~~~---------------- 162 (213)
..+.++..+..|.+|.+.+.|+.|++|++..-. ++..+.+
T Consensus 250 ~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~ 329 (720)
T KOG0321|consen 250 NYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDD 329 (720)
T ss_pred cccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCcEEEEeccccCcCchhhccCcccceeeeeeecCCCC
Confidence 567888888889988888889999999986421 1111100
Q ss_pred -------------------CCCceeEEEecCCCeEEEEeCCC--CeEEEEecCCcEEEEeCCCC
Q psy7433 163 -------------------EHARSSFFKHIGQGVTQLHVDGG--SRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 163 -------------------~~~~~~~~~~~~~~v~~~~~~~~--~~l~s~~~d~~i~iw~~~~~ 205 (213)
..........|...|++++|.|. .-+++++.|..+++|++.++
T Consensus 330 ~~l~SgSsd~~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~pS~~t~v~TcSdD~~~kiW~l~~~ 393 (720)
T KOG0321|consen 330 CSLLSGSSDEQAYIWVVSSPEAPPALLLGHTREVTTVRWLPSATTPVATCSDDFRVKIWRLSNG 393 (720)
T ss_pred ceEeccCCCcceeeeeecCccCChhhhhCcceEEEEEeeccccCCCceeeccCcceEEEeccCc
Confidence 11111122335568999999984 35899999999999999665
|
|
| >KOG1408|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.9e-19 Score=138.25 Aligned_cols=188 Identities=21% Similarity=0.310 Sum_probs=158.5
Q ss_pred ccccccCceEEEEEeC---CCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCC--CEEEEEcCC
Q psy7433 2 TYQCHNKITSDFVFLG---SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQH--QLLISAGKK 76 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~---~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~d 76 (213)
++++|...|.|+.|+. ..++||++ +.|.-|.+||+. .....+.++.+|...|++++|-.+| ..+++++.|
T Consensus 496 ~~eAHesEilcLeyS~p~~~~kLLASa---srdRlIHV~Dv~--rny~l~qtld~HSssITsvKFa~~gln~~MiscGAD 570 (1080)
T KOG1408|consen 496 FMEAHESEILCLEYSFPVLTNKLLASA---SRDRLIHVYDVK--RNYDLVQTLDGHSSSITSVKFACNGLNRKMISCGAD 570 (1080)
T ss_pred heecccceeEEEeecCchhhhHhhhhc---cCCceEEEEecc--cccchhhhhcccccceeEEEEeecCCceEEEeccCc
Confidence 4679999999999986 45688988 799999999994 5667888999999999999998877 789999999
Q ss_pred CcEEEEeccCc-eEEEeccc-----CCCCeeEEEecCCCCEEEEecCCCcee--------------------eceEEEEE
Q psy7433 77 GDICVIDLRQR-VIRSRFNA-----HESPVKCLAIDPHEEFFVTGAGDGDIK--------------------SPVKCLAI 130 (213)
Q Consensus 77 ~~v~iwd~~~~-~~~~~~~~-----~~~~i~~~~~~~~~~~l~~~~~~~~i~--------------------~~v~~~~~ 130 (213)
+.|. |+.... .....+.. ....+..++..|..+++++++.|..|+ +....+..
T Consensus 571 ksim-Fr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~l 649 (1080)
T KOG1408|consen 571 KSIM-FRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVIL 649 (1080)
T ss_pred hhhh-eehhccccCceeccccccccccceEEEeeeCCCcceEEEEecccceEEEeccccceeeeecccccCCCceEEEEE
Confidence 8775 444331 11112221 234678999999999999999999987 67788999
Q ss_pred ccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCC-CeEEEEecCCcEEEEeCCCC
Q psy7433 131 DPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG-SRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 131 ~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~d~~i~iw~~~~~ 205 (213)
+|.|-|+++...|.++.++|+-+++++....+|. ..|+.+.|.+| ..|++.+.||.|.||.+...
T Consensus 650 DPSgiY~atScsdktl~~~Df~sgEcvA~m~GHs----------E~VTG~kF~nDCkHlISvsgDgCIFvW~lp~~ 715 (1080)
T KOG1408|consen 650 DPSGIYLATSCSDKTLCFVDFVSGECVAQMTGHS----------EAVTGVKFLNDCKHLISVSGDGCIFVWKLPLT 715 (1080)
T ss_pred CCCccEEEEeecCCceEEEEeccchhhhhhcCcc----------hheeeeeecccchhheeecCCceEEEEECchh
Confidence 9999999999999999999999999999999987 68999999986 56999999999999998753
|
|
| >KOG0322|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.6e-20 Score=125.75 Aligned_cols=124 Identities=20% Similarity=0.291 Sum_probs=102.0
Q ss_pred EEEEEcCCCcEEEEeccCce----------EEEecccCCCCeeEEEecCCCCEEEEecCCCcee----------------
Q psy7433 69 LLISAGKKGDICVIDLRQRV----------IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK---------------- 122 (213)
Q Consensus 69 ~l~~~~~d~~v~iwd~~~~~----------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~---------------- 122 (213)
++++|-.+|.+.+||+.++. .......|..++.++.+.+....=++++.+..+.
T Consensus 167 lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~~~e 246 (323)
T KOG0322|consen 167 LLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQIRKE 246 (323)
T ss_pred EEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeeccccCcccccce
Confidence 46678889999999999873 3334445788999999987544334444333321
Q ss_pred -----eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCC-CeEEEEecCCc
Q psy7433 123 -----SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG-SRLFSCGADGS 196 (213)
Q Consensus 123 -----~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~d~~ 196 (213)
..+..+...||++.+++++.|++|+||..++.+++..+..|. ..|++++|+|+ +.+|+++.|+.
T Consensus 247 ~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHs----------agvn~vAfspd~~lmAaaskD~r 316 (323)
T KOG0322|consen 247 ITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHS----------AGVNAVAFSPDCELMAAASKDAR 316 (323)
T ss_pred EEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhh----------cceeEEEeCCCCchhhhccCCce
Confidence 678889999999999999999999999999999999999887 78999999998 78999999999
Q ss_pred EEEEeC
Q psy7433 197 MKVRQL 202 (213)
Q Consensus 197 i~iw~~ 202 (213)
|.+|++
T Consensus 317 ISLWkL 322 (323)
T KOG0322|consen 317 ISLWKL 322 (323)
T ss_pred EEeeec
Confidence 999986
|
|
| >KOG2096|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=1e-18 Score=122.67 Aligned_cols=180 Identities=18% Similarity=0.271 Sum_probs=148.8
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEec
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDL 84 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~ 84 (213)
.|+-.|..+-...++.+|+++ +.|..|.+|++ +++.+..+......-...+.||+|+++++++..--|++|.+
T Consensus 185 kh~v~~i~iGiA~~~k~imsa---s~dt~i~lw~l----kGq~L~~idtnq~~n~~aavSP~GRFia~~gFTpDVkVwE~ 257 (420)
T KOG2096|consen 185 KHQVDIINIGIAGNAKYIMSA---SLDTKICLWDL----KGQLLQSIDTNQSSNYDAAVSPDGRFIAVSGFTPDVKVWEP 257 (420)
T ss_pred hcccceEEEeecCCceEEEEe---cCCCcEEEEec----CCceeeeeccccccccceeeCCCCcEEEEecCCCCceEEEE
Confidence 466677788888899999999 89999999997 47777777766667788899999999999999999999987
Q ss_pred c---Cc-----eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee----------------------------eceEEE
Q psy7433 85 R---QR-----VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----------------------------SPVKCL 128 (213)
Q Consensus 85 ~---~~-----~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------------------~~v~~~ 128 (213)
- .| ..+..+++|+..|..++|+|+...+++.+.||.++ +....+
T Consensus 258 ~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL 337 (420)
T KOG2096|consen 258 IFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRL 337 (420)
T ss_pred EeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccceEecCCCchHhhcCCcchhhcCCCceEE
Confidence 3 22 23456789999999999999999999999999987 445589
Q ss_pred EEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEe
Q psy7433 129 AIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQ 201 (213)
Q Consensus 129 ~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~ 201 (213)
+++|+|+.|+.+.. ..+++|..+.++....++.-+ +..|.+++|+++++.+....|..+++..
T Consensus 338 ~lsP~g~~lA~s~g-s~l~~~~se~g~~~~~~e~~h---------~~~Is~is~~~~g~~~atcGdr~vrv~~ 400 (420)
T KOG2096|consen 338 ELSPSGDSLAVSFG-SDLKVFASEDGKDYPELEDIH---------STTISSISYSSDGKYIATCGDRYVRVIR 400 (420)
T ss_pred EeCCCCcEEEeecC-CceEEEEcccCccchhHHHhh---------cCceeeEEecCCCcEEeeecceeeeeec
Confidence 99999998877654 479999999888877776544 3789999999988755555677888876
|
|
| >KOG1063|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.5e-18 Score=132.53 Aligned_cols=116 Identities=16% Similarity=0.227 Sum_probs=91.6
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccc--c---ceeeeeeecCCceEEEEecCCCEEEEEcCCC
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKK--A---LVQAFVCHDQGASSLVFAPQHQLLISAGKKG 77 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~--~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 77 (213)
+.||...|+++.|+|.+..|.++ +.|.++.+|...+. ++ . .+....+.........|+|+++.+++-+..|
T Consensus 263 l~GHeDWV~sv~W~p~~~~LLSA---SaDksmiiW~pd~~-tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~G 338 (764)
T KOG1063|consen 263 LMGHEDWVYSVWWHPEGLDLLSA---SADKSMIIWKPDEN-TGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRTG 338 (764)
T ss_pred hcCcccceEEEEEccchhhheec---ccCcceEEEecCCc-cceEEEEEEeecccccccceeeEEEcCCCCEEEEecccC
Confidence 56999999999999999888888 79999999986421 11 1 1222223345678899999999999999999
Q ss_pred cEEEEeccCc---eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee
Q psy7433 78 DICVIDLRQR---VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122 (213)
Q Consensus 78 ~v~iwd~~~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~ 122 (213)
..++|..... .+...+.+|-+.|..++|+|.|.+|++.+.|.+-+
T Consensus 339 g~hlWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTR 386 (764)
T KOG1063|consen 339 GFHLWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTR 386 (764)
T ss_pred cEEEEeccCccceeeccccccccccceeeeecCCCCEEEEecccccee
Confidence 9999984332 34445678999999999999999999999998664
|
|
| >KOG0650|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=1e-18 Score=131.60 Aligned_cols=192 Identities=15% Similarity=0.209 Sum_probs=149.0
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCC--EEEEEcCCCcE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQ--LLISAGKKGDI 79 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~v 79 (213)
.++||++.|++|...|.|.+||+| +.||+|+||.+ .++.+++.++ ..+.|.+++|+|.+. .||++-.. .+
T Consensus 395 vyrGHtg~Vr~iSvdp~G~wlasG---sdDGtvriWEi---~TgRcvr~~~-~d~~I~~vaw~P~~~~~vLAvA~~~-~~ 466 (733)
T KOG0650|consen 395 VYRGHTGLVRSISVDPSGEWLASG---SDDGTVRIWEI---ATGRCVRTVQ-FDSEIRSVAWNPLSDLCVLAVAVGE-CV 466 (733)
T ss_pred eEeccCCeEEEEEecCCcceeeec---CCCCcEEEEEe---ecceEEEEEe-ecceeEEEEecCCCCceeEEEEecC-ce
Confidence 578999999999999999999999 79999999999 7889998877 456899999999664 44444332 23
Q ss_pred EEEeccCc------------------------------------e-EEEecccCCCCeeEEEecCCCCEEEEecCCCcee
Q psy7433 80 CVIDLRQR------------------------------------V-IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122 (213)
Q Consensus 80 ~iwd~~~~------------------------------------~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~ 122 (213)
.|-+..-| + -++..-.|...|..+.|+..|.+|++...++.-+
T Consensus 467 ~ivnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~ 546 (733)
T KOG0650|consen 467 LIVNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNK 546 (733)
T ss_pred EEeCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcc
Confidence 33332111 0 0112223677899999999999999988765332
Q ss_pred --------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEe
Q psy7433 123 --------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHV 182 (213)
Q Consensus 123 --------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 182 (213)
+.|.++.|+|...+|++++.. .|++||+...+....+.... ..|..++.
T Consensus 547 ~VliHQLSK~~sQ~PF~kskG~vq~v~FHPs~p~lfVaTq~-~vRiYdL~kqelvKkL~tg~----------kwiS~msi 615 (733)
T KOG0650|consen 547 SVLIHQLSKRKSQSPFRKSKGLVQRVKFHPSKPYLFVATQR-SVRIYDLSKQELVKKLLTGS----------KWISSMSI 615 (733)
T ss_pred eEEEEecccccccCchhhcCCceeEEEecCCCceEEEEecc-ceEEEehhHHHHHHHHhcCC----------eeeeeeee
Confidence 789999999999999988764 79999998877777766544 57999999
Q ss_pred CCC-CeEEEEecCCcEEEEeCCCCccccccC
Q psy7433 183 DGG-SRLFSCGADGSMKVRQLPDRDAVVHTL 212 (213)
Q Consensus 183 ~~~-~~l~s~~~d~~i~iw~~~~~~~~~~~l 212 (213)
+|. ..|+.++.|+.+..+|+.-..++.++|
T Consensus 616 hp~GDnli~gs~d~k~~WfDldlsskPyk~l 646 (733)
T KOG0650|consen 616 HPNGDNLILGSYDKKMCWFDLDLSSKPYKTL 646 (733)
T ss_pred cCCCCeEEEecCCCeeEEEEcccCcchhHHh
Confidence 994 469999999999999998776665543
|
|
| >KOG0294|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.8e-18 Score=121.13 Aligned_cols=146 Identities=21% Similarity=0.353 Sum_probs=113.2
Q ss_pred ccccccCceEEEEEeCCCC--eEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcE
Q psy7433 2 TYQCHNKITSDFVFLGSCS--LVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDI 79 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~--~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v 79 (213)
+|-.|.+.|+++.|.++-. .|+++ +.||.|.+|+. ....++..+++|.+.|+.++.+|.+++.++.+.|+.+
T Consensus 78 ~ll~HagsitaL~F~~~~S~shLlS~---sdDG~i~iw~~---~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~l 151 (362)
T KOG0294|consen 78 ILLSHAGSITALKFYPPLSKSHLLSG---SDDGHIIIWRV---GSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVL 151 (362)
T ss_pred ceeccccceEEEEecCCcchhheeee---cCCCcEEEEEc---CCeEEeeeecccccccceeEecCCCceEEEEcCCcee
Confidence 4567999999999998664 78888 79999999999 7889999999999999999999999999999999999
Q ss_pred EEEeccCceEEEecccCCCCeeEEEecCC---------------------------------------CCEEEEecCCCc
Q psy7433 80 CVIDLRQRVIRSRFNAHESPVKCLAIDPH---------------------------------------EEFFVTGAGDGD 120 (213)
Q Consensus 80 ~iwd~~~~~~~~~~~~~~~~i~~~~~~~~---------------------------------------~~~l~~~~~~~~ 120 (213)
++||+-+|+.-...+ -....+.+.|+|. +..+++|..++.
T Consensus 152 r~WNLV~Gr~a~v~~-L~~~at~v~w~~~Gd~F~v~~~~~i~i~q~d~A~v~~~i~~~~r~l~~~~l~~~~L~vG~d~~~ 230 (362)
T KOG0294|consen 152 RTWNLVRGRVAFVLN-LKNKATLVSWSPQGDHFVVSGRNKIDIYQLDNASVFREIENPKRILCATFLDGSELLVGGDNEW 230 (362)
T ss_pred eeehhhcCccceeec-cCCcceeeEEcCCCCEEEEEeccEEEEEecccHhHhhhhhccccceeeeecCCceEEEecCCce
Confidence 999997764322211 1111112333333 345666666666
Q ss_pred ee-----------------eceEEEEE--ccCCceEEEecCCCcEEEEEccCC
Q psy7433 121 IK-----------------SPVKCLAI--DPHEEFFVTGAGDGDIKVWSLSGN 154 (213)
Q Consensus 121 i~-----------------~~v~~~~~--~~~~~~l~~~~~dg~i~v~d~~~~ 154 (213)
+. ..|..+.+ +|++.+|++++.||.|+|||++..
T Consensus 231 i~~~D~ds~~~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~ 283 (362)
T KOG0294|consen 231 ISLKDTDSDTPLTEFLAHENRVKDIASYTNPEHEYLVTASSDGFIKVWDIDME 283 (362)
T ss_pred EEEeccCCCccceeeecchhheeeeEEEecCCceEEEEeccCceEEEEEcccc
Confidence 55 67777773 567889999999999999999754
|
|
| >KOG4378|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=8.1e-19 Score=129.67 Aligned_cols=171 Identities=16% Similarity=0.302 Sum_probs=140.4
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeee-cCCceEEEEecCCC-EEEEEcCCCcE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCH-DQGASSLVFAPQHQ-LLISAGKKGDI 79 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~-~l~~~~~d~~v 79 (213)
.|++|+..|+++.++-...+||++ +..|.|.|..+ .++.....+... ...|+-+.|+|..+ +|.+++++|.|
T Consensus 116 ~lkdh~stvt~v~YN~~DeyiAsv---s~gGdiiih~~---~t~~~tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~V 189 (673)
T KOG4378|consen 116 FLKDHQSTVTYVDYNNTDEYIASV---SDGGDIIIHGT---KTKQKTTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAV 189 (673)
T ss_pred hccCCcceeEEEEecCCcceeEEe---ccCCcEEEEec---ccCccccceecCCCCeEEEeecccccceeeEeeccCCeE
Confidence 478999999999999999999999 89999999998 445555555533 34566899999765 56678999999
Q ss_pred EEEeccCceEEEec-ccCCCCeeEEEecCC-CCEEEEecCCCcee----------------eceEEEEEccCCceEEEec
Q psy7433 80 CVIDLRQRVIRSRF-NAHESPVKCLAIDPH-EEFFVTGAGDGDIK----------------SPVKCLAIDPHEEFFVTGA 141 (213)
Q Consensus 80 ~iwd~~~~~~~~~~-~~~~~~i~~~~~~~~-~~~l~~~~~~~~i~----------------~~v~~~~~~~~~~~l~~~~ 141 (213)
.+||+....+...+ ..|..+...++|+|. ...|++.+.|..|. .+...++|+++|.+|++|+
T Consensus 190 tlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l~y~~Plstvaf~~~G~~L~aG~ 269 (673)
T KOG4378|consen 190 TLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRLTYSHPLSTVAFSECGTYLCAGN 269 (673)
T ss_pred EEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeecccccccceeeecCCcceeeecCCceEEEeec
Confidence 99999877665544 568999999999995 45788889998876 7889999999999999999
Q ss_pred CCCcEEEEEcc-CCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeE
Q psy7433 142 GDGDIKVWSLS-GNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRL 188 (213)
Q Consensus 142 ~dg~i~v~d~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l 188 (213)
..|.|..||+| +..++..+..|. ..|++++|.|...+
T Consensus 270 s~G~~i~YD~R~~k~Pv~v~sah~----------~sVt~vafq~s~tv 307 (673)
T KOG4378|consen 270 SKGELIAYDMRSTKAPVAVRSAHD----------ASVTRVAFQPSPTV 307 (673)
T ss_pred CCceEEEEecccCCCCceEeeecc----------cceeEEEeeeccee
Confidence 99999999998 456677777776 67999999875433
|
|
| >KOG1007|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=9.2e-19 Score=121.36 Aligned_cols=191 Identities=15% Similarity=0.243 Sum_probs=142.1
Q ss_pred ccccccCceEEEEEeC-CCCeEEEeeccCCC----ccEEEEeCCCccc------ccceeeee-eecCCceEEEEecCCCE
Q psy7433 2 TYQCHNKITSDFVFLG-SCSLVATAGHSSES----KNVCLWDSLLPQK------KALVQAFV-CHDQGASSLVFAPQHQL 69 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~-~~~~l~~~g~~s~~----~~i~iwd~~~~~~------~~~~~~~~-~~~~~v~~~~~~~~~~~ 69 (213)
+|..|.+.|+.++-+| +.++|+|+-....+ ..+-||.+..+.. .+++..+. .+-+.+.|+.|.|++..
T Consensus 58 vf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~Ldteavg~i~cvew~Pns~k 137 (370)
T KOG1007|consen 58 VFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVASLDTEAVGKINCVEWEPNSDK 137 (370)
T ss_pred hhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhcCCHHHhCceeeEEEcCCCCe
Confidence 4567889999999999 56667766211111 2477999843221 23344443 45568999999999999
Q ss_pred EEEEcCCCcEEEEeccCceE-EEecc-----cCCCCeeEEEecC--CCCEEEEecCCCcee------------------e
Q psy7433 70 LISAGKKGDICVIDLRQRVI-RSRFN-----AHESPVKCLAIDP--HEEFFVTGAGDGDIK------------------S 123 (213)
Q Consensus 70 l~~~~~d~~v~iwd~~~~~~-~~~~~-----~~~~~i~~~~~~~--~~~~l~~~~~~~~i~------------------~ 123 (213)
+++-. |..|.+|++..+.. +..+. .+....++-+|+| +++.+++.+. +++. .
T Consensus 138 lasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt~d-~tl~~~D~RT~~~~~sI~dAHgq 215 (370)
T KOG1007|consen 138 LASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATTSD-STLQFWDLRTMKKNNSIEDAHGQ 215 (370)
T ss_pred eEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEeCC-CcEEEEEccchhhhcchhhhhcc
Confidence 99886 78999999987644 33322 2345677888998 6777776654 3332 5
Q ss_pred ceEEEEEccCCc-eEEEecCCCcEEEEEcc-CCeeeeeecCCCCceeEEEecCCCeEEEEeCC--CCeEEEEecCCcEEE
Q psy7433 124 PVKCLAIDPHEE-FFVTGAGDGDIKVWSLS-GNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG--GSRLFSCGADGSMKV 199 (213)
Q Consensus 124 ~v~~~~~~~~~~-~l~~~~~dg~i~v~d~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~l~s~~~d~~i~i 199 (213)
.+..+.|+|+.+ +|++++.||.|++||.| +..+++.+..|. ..|.++.|+| +..+++++.|..|.+
T Consensus 216 ~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~Hs----------HWvW~VRfn~~hdqLiLs~~SDs~V~L 285 (370)
T KOG1007|consen 216 RVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHS----------HWVWAVRFNPEHDQLILSGGSDSAVNL 285 (370)
T ss_pred eeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCc----------eEEEEEEecCccceEEEecCCCceeEE
Confidence 689999999877 78899999999999997 456788888886 7899999998 567999999999999
Q ss_pred EeCCC
Q psy7433 200 RQLPD 204 (213)
Q Consensus 200 w~~~~ 204 (213)
|...+
T Consensus 286 sca~s 290 (370)
T KOG1007|consen 286 SCASS 290 (370)
T ss_pred Eeccc
Confidence 97654
|
|
| >KOG2106|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=7.5e-18 Score=124.74 Aligned_cols=180 Identities=18% Similarity=0.292 Sum_probs=144.4
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCc
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR 87 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~ 87 (213)
+.|.|++|.++|+. +|+ ..+|.|.||+. ...+..+....|++.|.+++...+|. |++|+.|+.|..||-.-.
T Consensus 247 k~Vl~v~F~engdv-iTg---DS~G~i~Iw~~---~~~~~~k~~~aH~ggv~~L~~lr~Gt-llSGgKDRki~~Wd~~y~ 318 (626)
T KOG2106|consen 247 KFVLCVTFLENGDV-ITG---DSGGNILIWSK---GTNRISKQVHAHDGGVFSLCMLRDGT-LLSGGKDRKIILWDDNYR 318 (626)
T ss_pred eEEEEEEEcCCCCE-Eee---cCCceEEEEeC---CCceEEeEeeecCCceEEEEEecCcc-EeecCccceEEecccccc
Confidence 56999999998864 566 78999999997 45555556668999999999999996 455999999999984211
Q ss_pred eE-----------E-----------------------------EecccCCCCeeEEEecCCCCEEEEecCCCcee-----
Q psy7433 88 VI-----------R-----------------------------SRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----- 122 (213)
Q Consensus 88 ~~-----------~-----------------------------~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----- 122 (213)
+. + ....+|....+.++.+|+.+++++++.|+.++
T Consensus 319 k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~~~ 398 (626)
T KOG2106|consen 319 KLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWNDH 398 (626)
T ss_pred ccccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCChhheeeccCcceEEEccCC
Confidence 00 0 01234666788999999999999999999886
Q ss_pred ---------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEe
Q psy7433 123 ---------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCG 192 (213)
Q Consensus 123 ---------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~ 192 (213)
.+..|+.|+|.| .++.|+..|...+.|.++...+..-.. . .+++.++++|++ .||.|+
T Consensus 399 k~~wt~~~~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~~lv~~~~d-~----------~~ls~v~ysp~G~~lAvgs 466 (626)
T KOG2106|consen 399 KLEWTKIIEDPAECADFHPSG-VVAVGTATGRWFVLDTETQDLVTIHTD-N----------EQLSVVRYSPDGAFLAVGS 466 (626)
T ss_pred ceeEEEEecCceeEeeccCcc-eEEEeeccceEEEEecccceeEEEEec-C----------CceEEEEEcCCCCEEEEec
Confidence 788999999999 999999999999999988555444333 3 689999999965 699999
Q ss_pred cCCcEEEEeCCCCcc
Q psy7433 193 ADGSMKVRQLPDRDA 207 (213)
Q Consensus 193 ~d~~i~iw~~~~~~~ 207 (213)
.|+.|++|.+..+..
T Consensus 467 ~d~~iyiy~Vs~~g~ 481 (626)
T KOG2106|consen 467 HDNHIYIYRVSANGR 481 (626)
T ss_pred CCCeEEEEEECCCCc
Confidence 999999999986544
|
|
| >KOG0293|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.1e-19 Score=128.40 Aligned_cols=149 Identities=21% Similarity=0.283 Sum_probs=127.6
Q ss_pred ceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCc---eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-
Q psy7433 47 LVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR---VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK- 122 (213)
Q Consensus 47 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~- 122 (213)
..+.+..|..+|.-+.||++|++||+++.|.+..+|++... +...++.+|..+|.-+.|+||.+++++|+.+..+.
T Consensus 216 t~qil~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~l 295 (519)
T KOG0293|consen 216 TWQILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSL 295 (519)
T ss_pred hhhhHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHheee
Confidence 44556789999999999999999999999999999998654 45777889999999999999999999999887765
Q ss_pred -----------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCC
Q psy7433 123 -----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG 185 (213)
Q Consensus 123 -----------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 185 (213)
..+.+.+|.|||..+++|+.|+.+..||+. ++.+..+++-.. ..|.+++..+|
T Consensus 296 wDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlD-gn~~~~W~gvr~---------~~v~dlait~D 365 (519)
T KOG0293|consen 296 WDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLD-GNILGNWEGVRD---------PKVHDLAITYD 365 (519)
T ss_pred ccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCC-cchhhccccccc---------ceeEEEEEcCC
Confidence 578999999999999999999999999985 455666666442 56999999986
Q ss_pred C-eEEEEecCCcEEEEeCCCC
Q psy7433 186 S-RLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 186 ~-~l~s~~~d~~i~iw~~~~~ 205 (213)
+ ++++...|..|++++....
T Consensus 366 gk~vl~v~~d~~i~l~~~e~~ 386 (519)
T KOG0293|consen 366 GKYVLLVTVDKKIRLYNREAR 386 (519)
T ss_pred CcEEEEEecccceeeechhhh
Confidence 5 5888889999999998654
|
|
| >KOG1538|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.1e-18 Score=133.26 Aligned_cols=180 Identities=11% Similarity=0.196 Sum_probs=145.6
Q ss_pred ceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCce
Q psy7433 9 ITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRV 88 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~ 88 (213)
.|..++|-|||..|+.+ .+..+.+||. ..+..+.++++|...|.+++|+.+|+++++|+.|..|.+|.-.-..
T Consensus 14 ci~d~afkPDGsqL~lA----Ag~rlliyD~---ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG 86 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILA----AGSRLLVYDT---SDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEG 86 (1081)
T ss_pred chheeEECCCCceEEEe----cCCEEEEEeC---CCcccccccccccceEEEEEEccCCceeccCCCceeEEEecccccc
Confidence 79999999999998887 6889999998 6788889999999999999999999999999999999999864322
Q ss_pred EEEecccCCCCeeEEEecCCCCEEEEecCCCce--------------eeceEEEEEccCCceEEEecCCCcEEEEEccCC
Q psy7433 89 IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI--------------KSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGN 154 (213)
Q Consensus 89 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i--------------~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~ 154 (213)
+.++ .|.+.|.|+.|+|-...+++|+-+.-- ...+.+.+|..||++++.|-.+|+|.+-+. ++
T Consensus 87 -~LkY-SH~D~IQCMsFNP~~h~LasCsLsdFglWS~~qK~V~K~kss~R~~~CsWtnDGqylalG~~nGTIsiRNk-~g 163 (1081)
T KOG1538|consen 87 -ILKY-SHNDAIQCMSFNPITHQLASCSLSDFGLWSPEQKSVSKHKSSSRIICCSWTNDGQYLALGMFNGTISIRNK-NG 163 (1081)
T ss_pred -eeee-ccCCeeeEeecCchHHHhhhcchhhccccChhhhhHHhhhhheeEEEeeecCCCcEEEEeccCceEEeecC-CC
Confidence 2233 388999999999988889888754321 178999999999999999999999998764 34
Q ss_pred eeeeeecCCCCceeEEEecCCCeEEEEeCCC------CeEEEEecCCcEEEEeCCCC
Q psy7433 155 HLLYNFPGEHARSSFFKHIGQGVTQLHVDGG------SRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------~~l~s~~~d~~i~iw~~~~~ 205 (213)
++...++.+... .++|.+++|+|. ..+++.....++.++.+...
T Consensus 164 Eek~~I~Rpgg~-------Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~LsG~ 213 (1081)
T KOG1538|consen 164 EEKVKIERPGGS-------NSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLSGK 213 (1081)
T ss_pred CcceEEeCCCCC-------CCCceEEEecCCCCCCccceEEEEeccceeEEEEecce
Confidence 443344332211 278999999983 24888888889999988754
|
|
| >KOG2106|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=7.9e-18 Score=124.60 Aligned_cols=190 Identities=23% Similarity=0.323 Sum_probs=148.9
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
+.++|....+.++.+|+.++++|+ +.|+.+++|+- .+.+.+. .-..++.++.|+|.| .++.|...|...+
T Consensus 363 ~v~gh~delwgla~hps~~q~~T~---gqdk~v~lW~~-----~k~~wt~-~~~d~~~~~~fhpsg-~va~Gt~~G~w~V 432 (626)
T KOG2106|consen 363 TVQGHGDELWGLATHPSKNQLLTC---GQDKHVRLWND-----HKLEWTK-IIEDPAECADFHPSG-VVAVGTATGRWFV 432 (626)
T ss_pred EEEecccceeeEEcCCChhheeec---cCcceEEEccC-----CceeEEE-EecCceeEeeccCcc-eEEEeeccceEEE
Confidence 457899999999999999999999 68999999992 2233222 235778999999999 9999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-------------------eceEEEEEccCCceEEEecC
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-------------------SPVKCLAIDPHEEFFVTGAG 142 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-------------------~~v~~~~~~~~~~~l~~~~~ 142 (213)
.|.++...+..-.. ..++++++|+|+|.+||+|+.|+.+. .+|+.+.|++|++++.+-+.
T Consensus 433 ~d~e~~~lv~~~~d-~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~Ds~~~~~~S~ 511 (626)
T KOG2106|consen 433 LDTETQDLVTIHTD-NEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKCSGSPITHLDWSSDSQFLVSNSG 511 (626)
T ss_pred EecccceeEEEEec-CCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeeeecCceeEEeeecCCCceEEeccC
Confidence 99999666655554 88999999999999999999999886 78999999999999999999
Q ss_pred CCcEEEEEccCCeee---------------------------------------------------eeecCC--CCceeE
Q psy7433 143 DGDIKVWSLSGNHLL---------------------------------------------------YNFPGE--HARSSF 169 (213)
Q Consensus 143 dg~i~v~d~~~~~~~---------------------------------------------------~~~~~~--~~~~~~ 169 (213)
|-.|..|.....+.+ +.++.. ..+...
T Consensus 512 d~eiLyW~~~~~~~~ts~kDvkW~t~~c~lGF~v~g~s~~t~i~a~~rs~~~~~lA~gdd~g~v~lf~yPc~s~rA~~he 591 (626)
T KOG2106|consen 512 DYEILYWKPSECKQITSVKDVKWATYTCTLGFEVFGGSDGTDINAVARSHCEKLLASGDDFGKVHLFSYPCSSPRAPSHE 591 (626)
T ss_pred ceEEEEEccccCcccceecceeeeeeEEEEEEEEecccCCchHHHhhhhhhhhhhhccccCceEEEEccccCCCccccee
Confidence 999999954321111 111111 111222
Q ss_pred EEecCCCeEEEEeCC-CCeEEEEecCCcEEEEeC
Q psy7433 170 FKHIGQGVTQLHVDG-GSRLFSCGADGSMKVRQL 202 (213)
Q Consensus 170 ~~~~~~~v~~~~~~~-~~~l~s~~~d~~i~iw~~ 202 (213)
...|++-|++++|.- +..+.+.+.|.+|..|++
T Consensus 592 ~~ghs~~vt~V~Fl~~d~~li~tg~D~Si~qW~l 625 (626)
T KOG2106|consen 592 YGGHSSHVTNVAFLCKDSHLISTGKDTSIMQWRL 625 (626)
T ss_pred eccccceeEEEEEeeCCceEEecCCCceEEEEEe
Confidence 345678899999975 556777779999999986
|
|
| >KOG2048|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.9e-18 Score=127.92 Aligned_cols=186 Identities=17% Similarity=0.239 Sum_probs=154.5
Q ss_pred cccc-cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 3 YQCH-NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 3 l~~h-~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
+.++ .+.|-+++|++.++++-++ .+|.|.-||+ .+.+....+....+.|.+++.+|.+..++.|++||.+..
T Consensus 64 i~g~~drsIE~L~W~e~~RLFS~g----~sg~i~EwDl---~~lk~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~ 136 (691)
T KOG2048|consen 64 IHGPEDRSIESLAWAEGGRLFSSG----LSGSITEWDL---HTLKQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYD 136 (691)
T ss_pred EecCCCCceeeEEEccCCeEEeec----CCceEEEEec---ccCceeEEecCCCcceeEEEeCCccceEEeecCCceEEE
Confidence 4444 4579999999777666665 7999999999 777888888878889999999999999999999998888
Q ss_pred EeccCceEEE--ecccCCCCeeEEEecCCCCEEEEecCCCcee-------------------------eceEEEEEccCC
Q psy7433 82 IDLRQRVIRS--RFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-------------------------SPVKCLAIDPHE 134 (213)
Q Consensus 82 wd~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-------------------------~~v~~~~~~~~~ 134 (213)
++...++... .+....+++.+++|+|++..++.|+.||.|+ .-|.++.|-.++
T Consensus 137 ~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~ 216 (691)
T KOG2048|consen 137 FSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDS 216 (691)
T ss_pred EecCCceEEEEeecccccceEEEEEecCCccEEEecccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeecC
Confidence 8877765443 3444568999999999999999999999776 234555555444
Q ss_pred ceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCC-CeEEEEecCCcEEEEeCCCCc
Q psy7433 135 EFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG-SRLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 135 ~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~d~~i~iw~~~~~~ 206 (213)
.|++|...|.|.+||...+..++.+..|. ..|.+++..++ +++++++.|+.|..|...+..
T Consensus 217 -tI~sgDS~G~V~FWd~~~gTLiqS~~~h~----------adVl~Lav~~~~d~vfsaGvd~~ii~~~~~~~~ 278 (691)
T KOG2048|consen 217 -TIASGDSAGTVTFWDSIFGTLIQSHSCHD----------ADVLALAVADNEDRVFSAGVDPKIIQYSLTTNK 278 (691)
T ss_pred -cEEEecCCceEEEEcccCcchhhhhhhhh----------cceeEEEEcCCCCeEEEccCCCceEEEEecCCc
Confidence 69999999999999999999999999987 78999999985 789999999999988877653
|
|
| >KOG4378|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.8e-19 Score=130.42 Aligned_cols=182 Identities=14% Similarity=0.281 Sum_probs=150.7
Q ss_pred EEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEe
Q psy7433 13 FVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSR 92 (213)
Q Consensus 13 ~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~ 92 (213)
++......+++++| ..+.|+|||+ ....+.+.+++|...|+++.++-...+||+++..|.|.+..+.++.....
T Consensus 85 v~~~s~S~y~~sgG---~~~~Vkiwdl---~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~ 158 (673)
T KOG4378|consen 85 VACASQSLYEISGG---QSGCVKIWDL---RAKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTT 158 (673)
T ss_pred HhhhhcceeeeccC---cCceeeehhh---HHHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccc
Confidence 33334457888884 7999999999 56778888999999999999999889999999999999999999877777
Q ss_pred cccC-CCCeeEEEecCCCC-EEEEecCCCcee------------------eceEEEEEccCCc-eEEEecCCCcEEEEEc
Q psy7433 93 FNAH-ESPVKCLAIDPHEE-FFVTGAGDGDIK------------------SPVKCLAIDPHEE-FFVTGAGDGDIKVWSL 151 (213)
Q Consensus 93 ~~~~-~~~i~~~~~~~~~~-~l~~~~~~~~i~------------------~~v~~~~~~~~~~-~l~~~~~dg~i~v~d~ 151 (213)
|... ...+..+.++|..+ .|.+++.+|.+. .+...++|+|... +|++.+.|..|.+||.
T Consensus 159 f~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~ 238 (673)
T KOG4378|consen 159 FTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDI 238 (673)
T ss_pred eecCCCCeEEEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeec
Confidence 7644 44567999999766 456678888775 7888999999765 7889999999999999
Q ss_pred cCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEecCCcEEEEeCCCCcccccc
Q psy7433 152 SGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGADGSMKVRQLPDRDAVVHT 211 (213)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~d~~i~iw~~~~~~~~~~~ 211 (213)
+.......+... .+...++|.+++. |+.|...|.|..||++..+.++..
T Consensus 239 ~s~~s~~~l~y~-----------~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~Pv~v 288 (673)
T KOG4378|consen 239 RSQASTDRLTYS-----------HPLSTVAFSECGTYLCAGNSKGELIAYDMRSTKAPVAV 288 (673)
T ss_pred ccccccceeeec-----------CCcceeeecCCceEEEeecCCceEEEEecccCCCCceE
Confidence 977766666554 4789999999775 888999999999999988776653
|
|
| >KOG0290|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.3e-18 Score=120.74 Aligned_cols=186 Identities=16% Similarity=0.238 Sum_probs=146.3
Q ss_pred cccCceEEEEEeCCC-----CeEEEeeccCCCccEEEEeCCCcccc-cceeee-----eeecCCceEEEEec-CCCEEEE
Q psy7433 5 CHNKITSDFVFLGSC-----SLVATAGHSSESKNVCLWDSLLPQKK-ALVQAF-----VCHDQGASSLVFAP-QHQLLIS 72 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~-----~~l~~~g~~s~~~~i~iwd~~~~~~~-~~~~~~-----~~~~~~v~~~~~~~-~~~~l~~ 72 (213)
.|.-+++.+-|.|+. ++|||+ +..+++|.+...+.. .+...+ ..+..++++..|+. +.+++.+
T Consensus 94 d~~YP~tK~~wiPd~~g~~pdlLATs-----~D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igt 168 (364)
T KOG0290|consen 94 DHPYPVTKLMWIPDSKGVYPDLLATS-----SDFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGT 168 (364)
T ss_pred CCCCCccceEecCCccccCcchhhcc-----cCeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEe
Confidence 467789999999976 367776 578999998532111 111111 23567899999987 7789999
Q ss_pred EcCCCcEEEEeccCce---EEEecccCCCCeeEEEecCCC-CEEEEecCCCcee--------------------eceEEE
Q psy7433 73 AGKKGDICVIDLRQRV---IRSRFNAHESPVKCLAIDPHE-EFFVTGAGDGDIK--------------------SPVKCL 128 (213)
Q Consensus 73 ~~~d~~v~iwd~~~~~---~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~~~~i~--------------------~~v~~~ 128 (213)
++-|-+..+||++++. ...++-.|...|..++|...+ ..|++.+.||.++ .+...+
T Consensus 169 SSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRL 248 (364)
T KOG0290|consen 169 SSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRL 248 (364)
T ss_pred ecccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceee
Confidence 9999999999999863 355667799999999999854 4799999999987 567788
Q ss_pred EEccCCc-eEEEecCC-CcEEEEEccC-CeeeeeecCCCCceeEEEecCCCeEEEEeCCC--CeEEEEecCCcEEEEeCC
Q psy7433 129 AIDPHEE-FFVTGAGD-GDIKVWSLSG-NHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG--SRLFSCGADGSMKVRQLP 203 (213)
Q Consensus 129 ~~~~~~~-~l~~~~~d-g~i~v~d~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~l~s~~~d~~i~iw~~~ 203 (213)
+|+++.. ++++-..| ..|.|.|+|. ..++..+++|. +.|++++|.|. ..+++++.|..+-+||+.
T Consensus 249 swnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~----------a~VNgIaWaPhS~~hictaGDD~qaliWDl~ 318 (364)
T KOG0290|consen 249 SWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQ----------ASVNGIAWAPHSSSHICTAGDDCQALIWDLQ 318 (364)
T ss_pred ccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCc----------ccccceEecCCCCceeeecCCcceEEEEecc
Confidence 9988654 77766655 4689999984 56788899887 89999999995 469999999999999998
Q ss_pred CC
Q psy7433 204 DR 205 (213)
Q Consensus 204 ~~ 205 (213)
..
T Consensus 319 q~ 320 (364)
T KOG0290|consen 319 QM 320 (364)
T ss_pred cc
Confidence 64
|
|
| >KOG4283|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.6e-18 Score=117.00 Aligned_cols=145 Identities=19% Similarity=0.373 Sum_probs=123.3
Q ss_pred ccccCceEEEEEeC-CCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec---CCCEEEEEcCCCcE
Q psy7433 4 QCHNKITSDFVFLG-SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP---QHQLLISAGKKGDI 79 (213)
Q Consensus 4 ~~h~~~v~~~~~~~-~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~v 79 (213)
.+|+-.|.++.|-| |.-.|.++ +.|.++++||. .+.+....++ -++.|.+-+++| ...++|+|..+-.|
T Consensus 98 ~~Hky~iss~~WyP~DtGmFtss---SFDhtlKVWDt---nTlQ~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~V 170 (397)
T KOG4283|consen 98 NGHKYAISSAIWYPIDTGMFTSS---SFDHTLKVWDT---NTLQEAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQV 170 (397)
T ss_pred ccceeeeeeeEEeeecCceeecc---cccceEEEeec---ccceeeEEee-cCceeehhhcChhhhcceEEEEecCCCcE
Confidence 36788899999999 44566666 89999999998 4555555554 456788888988 34578888899999
Q ss_pred EEEeccCceEEEecccCCCCeeEEEecCCCC-EEEEecCCCcee--------------------------------eceE
Q psy7433 80 CVIDLRQRVIRSRFNAHESPVKCLAIDPHEE-FFVTGAGDGDIK--------------------------------SPVK 126 (213)
Q Consensus 80 ~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~~~~i~--------------------------------~~v~ 126 (213)
++.|+.+|..-+.+.+|.+.|.++.|+|... .|++|+.|+.++ +.+.
T Consensus 171 rLCDi~SGs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvn 250 (397)
T KOG4283|consen 171 RLCDIASGSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVN 250 (397)
T ss_pred EEEeccCCcceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceee
Confidence 9999999999999999999999999999766 578899999887 7789
Q ss_pred EEEEccCCceEEEecCCCcEEEEEccCCe
Q psy7433 127 CLAIDPHEEFFVTGAGDGDIKVWSLSGNH 155 (213)
Q Consensus 127 ~~~~~~~~~~l~~~~~dg~i~v~d~~~~~ 155 (213)
.++|..++.++++.+.|..+++|+..+++
T Consensus 251 gla~tSd~~~l~~~gtd~r~r~wn~~~G~ 279 (397)
T KOG4283|consen 251 GLAWTSDARYLASCGTDDRIRVWNMESGR 279 (397)
T ss_pred eeeecccchhhhhccCccceEEeecccCc
Confidence 99999999999999999999999997664
|
|
| >KOG2919|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=4e-18 Score=119.89 Aligned_cols=170 Identities=15% Similarity=0.205 Sum_probs=131.0
Q ss_pred eEEEEEeCCCCeEEEeeccCCCccEEEEeCCCc-ccccceeee----eeecCCceEEEEec-CCCEEEEEcCCCcEEEEe
Q psy7433 10 TSDFVFLGSCSLVATAGHSSESKNVCLWDSLLP-QKKALVQAF----VCHDQGASSLVFAP-QHQLLISAGKKGDICVID 83 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~-~~~~~~~~~----~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~iwd 83 (213)
-.+++|+|||.+|.+| .+..|+++|+..+ .......++ .+..+-+.+++|+| +...++.|+....+-||.
T Consensus 161 AhsL~Fs~DGeqlfaG----ykrcirvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~ 236 (406)
T KOG2919|consen 161 AHSLQFSPDGEQLFAG----YKRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYN 236 (406)
T ss_pred heeEEecCCCCeEeec----ccceEEEeeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEe
Confidence 3578999999999998 7999999999322 222222222 22356789999999 667899999999999999
Q ss_pred ccCceEEEecccCCCCeeEEEecCCCCEEEEecCCC-cee---------------------eceEEEEEccCCceEEEec
Q psy7433 84 LRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDG-DIK---------------------SPVKCLAIDPHEEFFVTGA 141 (213)
Q Consensus 84 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~-~i~---------------------~~v~~~~~~~~~~~l~~~~ 141 (213)
-..+.++..+.+|.+.|+.++|.++|+.|.+|.... .|. ..-.-+...|++++|++|+
T Consensus 237 ~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~L~rhv~~TNQRI~FDld~~~~~LasG~ 316 (406)
T KOG2919|consen 237 DDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVYALERHVGDTNQRILFDLDPKGEILASGD 316 (406)
T ss_pred cCCCCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccchhhhhhhhccCccceEEEecCCCCceeeccC
Confidence 888899999999999999999999999999988643 232 2222345678899999999
Q ss_pred CCCcEEEEEccC-CeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEec
Q psy7433 142 GDGDIKVWSLSG-NHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGA 193 (213)
Q Consensus 142 ~dg~i~v~d~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~ 193 (213)
.||.|++||++. ++....+..+. ..++.++++|-- .+++++.
T Consensus 317 tdG~V~vwdlk~~gn~~sv~~~~s----------d~vNgvslnP~mpilatssG 360 (406)
T KOG2919|consen 317 TDGSVRVWDLKDLGNEVSVTGNYS----------DTVNGVSLNPIMPILATSSG 360 (406)
T ss_pred CCccEEEEecCCCCCccccccccc----------ccccceecCcccceeeeccC
Confidence 999999999987 66566666654 678999999853 3454443
|
|
| >KOG1445|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.8e-19 Score=135.10 Aligned_cols=190 Identities=16% Similarity=0.186 Sum_probs=145.6
Q ss_pred cCceEEEEEeC-CCCeEEEeeccCCCccEEEEeCCCc----ccccceeeeeeecCCceEEEEec-CCCEEEEEcCCCcEE
Q psy7433 7 NKITSDFVFLG-SCSLVATAGHSSESKNVCLWDSLLP----QKKALVQAFVCHDQGASSLVFAP-QHQLLISAGKKGDIC 80 (213)
Q Consensus 7 ~~~v~~~~~~~-~~~~l~~~g~~s~~~~i~iwd~~~~----~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~ 80 (213)
...|+++.|.| |...||.+ ..||.|++|.+... ........+..|...|+++.|+| -.+.|+++++|.+|+
T Consensus 627 gt~vtDl~WdPFD~~rLAVa---~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~ 703 (1012)
T KOG1445|consen 627 GTLVTDLHWDPFDDERLAVA---TDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIE 703 (1012)
T ss_pred CceeeecccCCCChHHeeec---ccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceee
Confidence 45699999999 77788888 69999999998532 22345667888999999999999 567899999999999
Q ss_pred EEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-------------------eceEEEEEccCCceEEEec
Q psy7433 81 VIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-------------------SPVKCLAIDPHEEFFVTGA 141 (213)
Q Consensus 81 iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-------------------~~v~~~~~~~~~~~l~~~~ 141 (213)
+||+++++....+.+|.+.|..++|+|+|+.+++.+.|+.++ ..-..+.|--+|+++++.+
T Consensus 704 lWDl~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~pv~Eg~gpvgtRgARi~wacdgr~viv~G 783 (1012)
T KOG1445|consen 704 LWDLANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSREQPVYEGKGPVGTRGARILWACDGRIVIVVG 783 (1012)
T ss_pred eeehhhhhhhheeccCcCceeEEEECCCCcceeeeecCceEEEeCCCCCCCccccCCCCccCcceeEEEEecCcEEEEec
Confidence 999999999999999999999999999999999999999997 3345678888999887776
Q ss_pred CC----CcEEEEEccCC--eeeeeecCCCCceeEEEecCCCeEEEEeCCC-C-eEEEEecCCcEEEEeCCCCccc
Q psy7433 142 GD----GDIKVWSLSGN--HLLYNFPGEHARSSFFKHIGQGVTQLHVDGG-S-RLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 142 ~d----g~i~v~d~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~-~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
.| ..|.+||.++- .++.+......+ .+.--.++++ + .+++|-.|..|.+|++-....+
T Consensus 784 fdk~SeRQv~~Y~Aq~l~~~pl~t~~lDvap---------s~LvP~YD~Ds~~lfltGKGD~~v~~yEv~~esPy 849 (1012)
T KOG1445|consen 784 FDKSSERQVQMYDAQTLDLRPLYTQVLDVAP---------SPLVPHYDYDSNVLFLTGKGDRFVNMYEVIYESPY 849 (1012)
T ss_pred ccccchhhhhhhhhhhccCCcceeeeecccC---------ccccccccCCCceEEEecCCCceEEEEEecCCCce
Confidence 55 56888887642 333333222110 1111112233 2 4788889999999998766544
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.9e-17 Score=120.06 Aligned_cols=170 Identities=14% Similarity=0.217 Sum_probs=126.6
Q ss_pred CCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEE-EEEcCCCcEEEEeccCceEEEecccCC
Q psy7433 19 CSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLL-ISAGKKGDICVIDLRQRVIRSRFNAHE 97 (213)
Q Consensus 19 ~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~v~iwd~~~~~~~~~~~~~~ 97 (213)
++.++++ +.|+.|++||+ .+.+.+..+..+ ..+..++|+|+++.+ ++++.++.|++||..+++....+..+.
T Consensus 1 ~~~~~s~---~~d~~v~~~d~---~t~~~~~~~~~~-~~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~ 73 (300)
T TIGR03866 1 EKAYVSN---EKDNTISVIDT---ATLEVTRTFPVG-QRPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGP 73 (300)
T ss_pred CcEEEEe---cCCCEEEEEEC---CCCceEEEEECC-CCCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCC
Confidence 3567777 68999999998 455566666654 346789999999876 566788999999999988877666443
Q ss_pred CCeeEEEecCCCCEEEEe-cCCCcee----------------eceEEEEEccCCceEEEecCCC-cEEEEEccCCeeeee
Q psy7433 98 SPVKCLAIDPHEEFFVTG-AGDGDIK----------------SPVKCLAIDPHEEFFVTGAGDG-DIKVWSLSGNHLLYN 159 (213)
Q Consensus 98 ~~i~~~~~~~~~~~l~~~-~~~~~i~----------------~~v~~~~~~~~~~~l~~~~~dg-~i~v~d~~~~~~~~~ 159 (213)
. +..++++|+++.++++ ..++.+. ..+.+++|+|+++++++++.++ .+.+||.++++....
T Consensus 74 ~-~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~ 152 (300)
T TIGR03866 74 D-PELFALHPNGKILYIANEDDNLVTVIDIETRKVLAEIPVGVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDN 152 (300)
T ss_pred C-ccEEEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEeeCCCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEE
Confidence 3 5678999999877655 4566654 2367889999999999888765 567789987776654
Q ss_pred ecCCCCceeEEEecCCCeEEEEeCCCCe-E-EEEecCCcEEEEeCCCCcc
Q psy7433 160 FPGEHARSSFFKHIGQGVTQLHVDGGSR-L-FSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 160 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l-~s~~~d~~i~iw~~~~~~~ 207 (213)
.... ..+..+.|+|++. | +++..++.|++||+.+++.
T Consensus 153 ~~~~-----------~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~ 191 (300)
T TIGR03866 153 VLVD-----------QRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKV 191 (300)
T ss_pred EEcC-----------CCccEEEECCCCCEEEEEcCCCCEEEEEEcCccee
Confidence 4332 3456789998764 5 4445689999999987643
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >KOG1523|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=8.6e-18 Score=117.94 Aligned_cols=188 Identities=14% Similarity=0.159 Sum_probs=149.6
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
+|+.|...|+.++|+|..+.|+++ +.|..-++|....+.+.+....+..++..++++.|+|.++.+++|+....|.+
T Consensus 50 tls~Hd~~vtgvdWap~snrIvtc---s~drnayVw~~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isV 126 (361)
T KOG1523|consen 50 TLSEHDKIVTGVDWAPKSNRIVTC---SHDRNAYVWTQPSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISV 126 (361)
T ss_pred ehhhhCcceeEEeecCCCCceeEc---cCCCCccccccCCCCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEE
Confidence 678899999999999999999999 78999999998655667777777778999999999999999999999999999
Q ss_pred EeccCceE----EEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------------------------
Q psy7433 82 IDLRQRVI----RSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----------------------------------- 122 (213)
Q Consensus 82 wd~~~~~~----~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------------------------- 122 (213)
|-.+..+- .+.-+.+.+.|.+++|+|++-.+++|+.|+..+
T Consensus 127 cy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~g 206 (361)
T KOG1523|consen 127 CYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSG 206 (361)
T ss_pred EEEecccceehhhhhCCccccceeeeeccCCcceecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCC
Confidence 98865421 112234567899999999999999999999776
Q ss_pred eceEEEEEccCCceEEEecCCCcEEEEEccCCe-eeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEe
Q psy7433 123 SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNH-LLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQ 201 (213)
Q Consensus 123 ~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~ 201 (213)
+.+..+.|+|+|..|+-.+.|..+.+-|..... ........+ .+..++.|-.+..++.++.|..-.++.
T Consensus 207 gwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~~~v~~~~~~~----------lP~ls~~~ise~~vv~ag~~c~P~lf~ 276 (361)
T KOG1523|consen 207 GWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPSERVQSVATAQ----------LPLLSVSWISENSVVAAGYDCGPVLFV 276 (361)
T ss_pred CceeeeEeCCCCCEeeEecCCCceEEeecCCCchhccchhhcc----------CCceeeEeecCCceeecCCCCCceEEE
Confidence 789999999999999999999999999886554 333333332 456667776655666666664444443
Q ss_pred C
Q psy7433 202 L 202 (213)
Q Consensus 202 ~ 202 (213)
.
T Consensus 277 ~ 277 (361)
T KOG1523|consen 277 T 277 (361)
T ss_pred e
Confidence 3
|
|
| >KOG1538|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.3e-19 Score=134.65 Aligned_cols=189 Identities=13% Similarity=0.191 Sum_probs=141.2
Q ss_pred CccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCccc--------cccee-----------------------
Q psy7433 1 MTYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQK--------KALVQ----------------------- 49 (213)
Q Consensus 1 ~~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~--------~~~~~----------------------- 49 (213)
++|++|+..|+|++|+.||+.+|+| +.|..|.+|+...... .+++.
T Consensus 47 qtLKgHKDtVycVAys~dGkrFASG---~aDK~VI~W~~klEG~LkYSH~D~IQCMsFNP~~h~LasCsLsdFglWS~~q 123 (1081)
T KOG1538|consen 47 QPLKGHKDTVYCVAYAKDGKRFASG---SADKSVIIWTSKLEGILKYSHNDAIQCMSFNPITHQLASCSLSDFGLWSPEQ 123 (1081)
T ss_pred cccccccceEEEEEEccCCceeccC---CCceeEEEecccccceeeeccCCeeeEeecCchHHHhhhcchhhccccChhh
Confidence 5899999999999999999999999 6899999998531100 00000
Q ss_pred -eeeee--cCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecc---cCCCCeeEEEecCCC-----CEEEEecCC
Q psy7433 50 -AFVCH--DQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFN---AHESPVKCLAIDPHE-----EFFVTGAGD 118 (213)
Q Consensus 50 -~~~~~--~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~---~~~~~i~~~~~~~~~-----~~l~~~~~~ 118 (213)
....| ...+.+++|..||++++.|-.+|+|.+-+- +++....+. +...+|++++|+|.. ..+++....
T Consensus 124 K~V~K~kss~R~~~CsWtnDGqylalG~~nGTIsiRNk-~gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~ 202 (1081)
T KOG1538|consen 124 KSVSKHKSSSRIICCSWTNDGQYLALGMFNGTISIRNK-NGEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWG 202 (1081)
T ss_pred hhHHhhhhheeEEEeeecCCCcEEEEeccCceEEeecC-CCCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEecc
Confidence 00001 235678888889999999999999988763 344333333 366789999999843 356666665
Q ss_pred Ccee----------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEe
Q psy7433 119 GDIK----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHV 182 (213)
Q Consensus 119 ~~i~----------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 182 (213)
.++. ....|+.+.++|.+++.|+.|+.+++|- |.|-.+.++.... ..|..+..
T Consensus 203 qTLSFy~LsG~~Igk~r~L~FdP~CisYf~NGEy~LiGGsdk~L~~fT-R~GvrLGTvg~~D----------~WIWtV~~ 271 (1081)
T KOG1538|consen 203 QTLSFYQLSGKQIGKDRALNFDPCCISYFTNGEYILLGGSDKQLSLFT-RDGVRLGTVGEQD----------SWIWTVQA 271 (1081)
T ss_pred ceeEEEEecceeecccccCCCCchhheeccCCcEEEEccCCCceEEEe-ecCeEEeeccccc----------eeEEEEEE
Confidence 5543 5678899999999999999999999985 6676666665543 68999999
Q ss_pred CCCCe-EEEEecCCcEEEEeCCC
Q psy7433 183 DGGSR-LFSCGADGSMKVRQLPD 204 (213)
Q Consensus 183 ~~~~~-l~s~~~d~~i~iw~~~~ 204 (213)
.|+++ ++.|..||+|.-|++..
T Consensus 272 ~PNsQ~v~~GCqDGTiACyNl~f 294 (1081)
T KOG1538|consen 272 KPNSQYVVVGCQDGTIACYNLIF 294 (1081)
T ss_pred ccCCceEEEEEccCeeehhhhHH
Confidence 99764 88899999999998753
|
|
| >KOG0321|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.2e-18 Score=129.06 Aligned_cols=192 Identities=22% Similarity=0.309 Sum_probs=139.3
Q ss_pred EEEEeC---CCCeEEEeeccCCCccEEEEeCCCcc---cccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEecc
Q psy7433 12 DFVFLG---SCSLVATAGHSSESKNVCLWDSLLPQ---KKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLR 85 (213)
Q Consensus 12 ~~~~~~---~~~~l~~~g~~s~~~~i~iwd~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~ 85 (213)
+..|++ ....||.+ .++|.|.++|.+... +...++.+..|.+.|..++|-|....|++++.|.++++||+.
T Consensus 54 ~~sFs~~~n~eHiLava---dE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk 130 (720)
T KOG0321|consen 54 ADSFSAAPNKEHILAVA---DEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVK 130 (720)
T ss_pred cccccCCCCccceEEEe---cCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeec
Confidence 356665 34577777 799999999984211 112345667899999999999966789999999999999999
Q ss_pred CceEEEe--cccCCCCeeEEEecCC-CCEEEEecCCCcee----------------------------------------
Q psy7433 86 QRVIRSR--FNAHESPVKCLAIDPH-EEFFVTGAGDGDIK---------------------------------------- 122 (213)
Q Consensus 86 ~~~~~~~--~~~~~~~i~~~~~~~~-~~~l~~~~~~~~i~---------------------------------------- 122 (213)
+.+.... +.+|...+.+++|.|. ...|++|+.|+.+.
T Consensus 131 ~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~ 210 (720)
T KOG0321|consen 131 TSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKW 210 (720)
T ss_pred cceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhcccccc
Confidence 9888776 7899999999999995 45899999999885
Q ss_pred ----eceEE---EEEccCCceEEEecC-CCcEEEEEccCCeeeeeecCCCCcee-EEEecCCCeEEEEeCC-CCeEEEEe
Q psy7433 123 ----SPVKC---LAIDPHEEFFVTGAG-DGDIKVWSLSGNHLLYNFPGEHARSS-FFKHIGQGVTQLHVDG-GSRLFSCG 192 (213)
Q Consensus 123 ----~~v~~---~~~~~~~~~l~~~~~-dg~i~v~d~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~-~~~l~s~~ 192 (213)
..|.+ +.+..|...|++++. |+.|+|||+++............... ........+.++..+. +.+|++.+
T Consensus 211 kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsC 290 (720)
T KOG0321|consen 211 KAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASC 290 (720)
T ss_pred ccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEe
Confidence 23333 555667778888887 99999999987665544332111000 0011123466666654 45666666
Q ss_pred cCCcEEEEeCCCCc
Q psy7433 193 ADGSMKVRQLPDRD 206 (213)
Q Consensus 193 ~d~~i~iw~~~~~~ 206 (213)
.|+.|++|++.+..
T Consensus 291 tD~sIy~ynm~s~s 304 (720)
T KOG0321|consen 291 TDNSIYFYNMRSLS 304 (720)
T ss_pred cCCcEEEEeccccC
Confidence 79999999998653
|
|
| >KOG0268|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.5e-19 Score=125.77 Aligned_cols=144 Identities=18% Similarity=0.378 Sum_probs=120.3
Q ss_pred cCceEEEEEeCCC-CeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEecc
Q psy7433 7 NKITSDFVFLGSC-SLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLR 85 (213)
Q Consensus 7 ~~~v~~~~~~~~~-~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~ 85 (213)
...|.++.|+|.. ..|+++ ..|+.|.|||++ +..+++.+. ..-.-+.++|+|++-.+.+++.|..++.||++
T Consensus 187 ~Dti~svkfNpvETsILas~---~sDrsIvLyD~R---~~~Pl~KVi-~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR 259 (433)
T KOG0268|consen 187 ADSISSVKFNPVETSILASC---ASDRSIVLYDLR---QASPLKKVI-LTMRTNTICWNPEAFNFVAANEDHNLYTYDMR 259 (433)
T ss_pred CCceeEEecCCCcchheeee---ccCCceEEEecc---cCCccceee-eeccccceecCccccceeeccccccceehhhh
Confidence 3568889999954 566666 589999999995 344443332 23446789999988889999999999999998
Q ss_pred Cc-eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee------------------eceEEEEEccCCceEEEecCCCcE
Q psy7433 86 QR-VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------SPVKCLAIDPHEEFFVTGAGDGDI 146 (213)
Q Consensus 86 ~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------~~v~~~~~~~~~~~l~~~~~dg~i 146 (213)
.. .++....+|.+.+..+.|+|.|+-|++|+.|.+|+ ..|.|+.|+-|.+++++||.|+.|
T Consensus 260 ~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~nv 339 (433)
T KOG0268|consen 260 NLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMDSKYIISGSDDGNV 339 (433)
T ss_pred hhcccchhhcccceeEEEeccCCCcchhccccccceEEEeecCCCcchhhhhHhhhheeeEEEEeccccEEEecCCCcce
Confidence 75 56777888999999999999999999999999997 789999999999999999999999
Q ss_pred EEEEccCCeee
Q psy7433 147 KVWSLSGNHLL 157 (213)
Q Consensus 147 ~v~d~~~~~~~ 157 (213)
++|..+..+.+
T Consensus 340 RlWka~Asekl 350 (433)
T KOG0268|consen 340 RLWKAKASEKL 350 (433)
T ss_pred eeeecchhhhc
Confidence 99988655443
|
|
| >KOG2110|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.9e-17 Score=115.71 Aligned_cols=137 Identities=15% Similarity=0.301 Sum_probs=109.8
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeee---ecCCceEEEEecCCCEEEEE--cCCCcEEEE
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVC---HDQGASSLVFAPQHQLLISA--GKKGDICVI 82 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~--~~d~~v~iw 82 (213)
.+|.++.++. +.|+.+ -...|.|||+ ...+.+.++.. +...+.++.+++.+.+++.= ...|.|.+|
T Consensus 88 t~IL~VrmNr--~RLvV~----Lee~IyIydI---~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~ 158 (391)
T KOG2110|consen 88 TSILAVRMNR--KRLVVC----LEESIYIYDI---KDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLF 158 (391)
T ss_pred CceEEEEEcc--ceEEEE----EcccEEEEec---ccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEEE
Confidence 4577777653 355555 3566999999 55666655543 34445555555566688753 356899999
Q ss_pred eccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee--------------------eceEEEEEccCCceEEEecC
Q psy7433 83 DLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK--------------------SPVKCLAIDPHEEFFVTGAG 142 (213)
Q Consensus 83 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~--------------------~~v~~~~~~~~~~~l~~~~~ 142 (213)
|+.+-+++..+..|.+++.+++|+++|..||++++.|++. ..|.+++|+|++++|++.+.
T Consensus 159 d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~ 238 (391)
T KOG2110|consen 159 DTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSN 238 (391)
T ss_pred EcccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEecC
Confidence 9999999999999999999999999999999999999985 78999999999999999999
Q ss_pred CCcEEEEEccC
Q psy7433 143 DGDIKVWSLSG 153 (213)
Q Consensus 143 dg~i~v~d~~~ 153 (213)
.++|++|.+..
T Consensus 239 TeTVHiFKL~~ 249 (391)
T KOG2110|consen 239 TETVHIFKLEK 249 (391)
T ss_pred CCeEEEEEecc
Confidence 99999999864
|
|
| >KOG0649|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.6e-17 Score=111.08 Aligned_cols=172 Identities=16% Similarity=0.256 Sum_probs=129.7
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccc---cceeee--eee-----cCCceEEEEecCCCEEEE
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKK---ALVQAF--VCH-----DQGASSLVFAPQHQLLIS 72 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~---~~~~~~--~~~-----~~~v~~~~~~~~~~~l~~ 72 (213)
.++|.++|+.++|. .++|+++ .||.|+-|..++..+. +.+... +.| -.+|+++-..|..+.++.
T Consensus 58 eqahdgpiy~~~f~--d~~Lls~----gdG~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~ 131 (325)
T KOG0649|consen 58 EQAHDGPIYYLAFH--DDFLLSG----GDGLVYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILF 131 (325)
T ss_pred ccccCCCeeeeeee--hhheeec----cCceEEEeeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEE
Confidence 57999999999998 5577777 4799999988532221 111111 111 246889999997777777
Q ss_pred EcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCceeeceEEEEEccCCceEEEecCCCcEEEEEcc
Q psy7433 73 AGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLS 152 (213)
Q Consensus 73 ~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~ 152 (213)
++.|+.++-||+++|+..+.+++|.+.+.++.--.. ...+++|++||++++||.+
T Consensus 132 AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~-------------------------~~qilsG~EDGtvRvWd~k 186 (325)
T KOG0649|consen 132 AGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNA-------------------------NGQILSGAEDGTVRVWDTK 186 (325)
T ss_pred ecCCeEEEEEEecCCEEEEEEcCCcceeeeeeeccc-------------------------CcceeecCCCccEEEEecc
Confidence 778999999999999999999999999998876322 2358899999999999999
Q ss_pred CCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCcc
Q psy7433 153 GNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~ 207 (213)
+++....+.....+.....+.+..|.+++.+.+ .| .++....+.+|++++.+.
T Consensus 187 t~k~v~~ie~yk~~~~lRp~~g~wigala~~ed-Wl-vCGgGp~lslwhLrsse~ 239 (325)
T KOG0649|consen 187 TQKHVSMIEPYKNPNLLRPDWGKWIGALAVNED-WL-VCGGGPKLSLWHLRSSES 239 (325)
T ss_pred ccceeEEeccccChhhcCcccCceeEEEeccCc-eE-EecCCCceeEEeccCCCc
Confidence 999999887765555555556677888887644 44 445566899999987654
|
|
| >KOG1007|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.9e-17 Score=114.00 Aligned_cols=194 Identities=16% Similarity=0.236 Sum_probs=144.7
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeee-----eecCCceEEEEec--CCCEEEEEcCCC
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV-----CHDQGASSLVFAP--QHQLLISAGKKG 77 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~-----~~~~~v~~~~~~~--~~~~l~~~~~d~ 77 (213)
.+-+.|.|+.|.|++..+++- .+..|.+|++.+..+. +..+. .+....++-+|+| +++.+++. .|+
T Consensus 121 eavg~i~cvew~Pns~klasm----~dn~i~l~~l~ess~~--vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt-~d~ 193 (370)
T KOG1007|consen 121 EAVGKINCVEWEPNSDKLASM----DDNNIVLWSLDESSKI--VAEVLSSESAEMRHSFTSGAWSPHHDGNQVATT-SDS 193 (370)
T ss_pred HHhCceeeEEEcCCCCeeEEe----ccCceEEEEcccCcch--heeecccccccccceecccccCCCCccceEEEe-CCC
Confidence 355689999999999999998 6999999999643331 22221 2455678889998 77777776 478
Q ss_pred cEEEEeccCceEEEecc-cCCCCeeEEEecCCCC-EEEEecCCCcee------------------eceEEEEEccCC-ce
Q psy7433 78 DICVIDLRQRVIRSRFN-AHESPVKCLAIDPHEE-FFVTGAGDGDIK------------------SPVKCLAIDPHE-EF 136 (213)
Q Consensus 78 ~v~iwd~~~~~~~~~~~-~~~~~i~~~~~~~~~~-~l~~~~~~~~i~------------------~~v~~~~~~~~~-~~ 136 (213)
++..||+++.+....+. .|...+..+.|+|+.. +|++|+.|+.++ ..+.++.|+|.. ++
T Consensus 194 tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~~hdqL 273 (370)
T KOG1007|consen 194 TLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNPEHDQL 273 (370)
T ss_pred cEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEEecCccceE
Confidence 99999999987666664 5888899999999654 688899999887 789999999974 58
Q ss_pred EEEecCCCcEEEEEccCCeeeeeec---------CCC----------CceeEEEecCCCeEEEEeCC-CCe-EEEEecCC
Q psy7433 137 FVTGAGDGDIKVWSLSGNHLLYNFP---------GEH----------ARSSFFKHIGQGVTQLHVDG-GSR-LFSCGADG 195 (213)
Q Consensus 137 l~~~~~dg~i~v~d~~~~~~~~~~~---------~~~----------~~~~~~~~~~~~v~~~~~~~-~~~-l~s~~~d~ 195 (213)
+++|+.|..|.+|....-.....+. .+. .....+..|...|++++|+. +.. +|+-++||
T Consensus 274 iLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPWiFASLSYDG 353 (370)
T KOG1007|consen 274 ILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPWIFASLSYDG 353 (370)
T ss_pred EEecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeeccCCCeeEEEeccCc
Confidence 9999999999999875321111111 100 01112445668999999986 554 89999999
Q ss_pred cEEEEeCCCC
Q psy7433 196 SMKVRQLPDR 205 (213)
Q Consensus 196 ~i~iw~~~~~ 205 (213)
.+.|=.+...
T Consensus 354 RviIs~V~r~ 363 (370)
T KOG1007|consen 354 RVIISSVPRF 363 (370)
T ss_pred eEEeecCChh
Confidence 9999888754
|
|
| >KOG0303|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=2e-17 Score=119.10 Aligned_cols=180 Identities=10% Similarity=0.157 Sum_probs=135.6
Q ss_pred CCCeEEEeeccCCCccEEEEeCCCcccc---cceeeeeeecCCceEEEEec-CCCEEEEEcCCCcEEEEeccCc------
Q psy7433 18 SCSLVATAGHSSESKNVCLWDSLLPQKK---ALVQAFVCHDQGASSLVFAP-QHQLLISAGKKGDICVIDLRQR------ 87 (213)
Q Consensus 18 ~~~~l~~~g~~s~~~~i~iwd~~~~~~~---~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~iwd~~~~------ 87 (213)
+.+++|..-+++..|...+.-+. +.+ ...-.+.+|.++|..++|+| +.+.||+|+.|.+|.+|.+..+
T Consensus 43 NPkfiAvi~easgGgaf~ViPl~--k~Gr~d~~~P~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~l 120 (472)
T KOG0303|consen 43 NPKFVAVIIEASGGGAFLVIPLV--KTGRMDASYPLVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDL 120 (472)
T ss_pred CCceEEEEEecCCCcceeecccc--cccccCCCCCCccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCc
Confidence 45566655433344455555442 222 23334668999999999999 6678999999999999999653
Q ss_pred -eEEEecccCCCCeeEEEecCC-CCEEEEecCCCcee----------------eceEEEEEccCCceEEEecCCCcEEEE
Q psy7433 88 -VIRSRFNAHESPVKCLAIDPH-EEFFVTGAGDGDIK----------------SPVKCLAIDPHEEFFVTGAGDGDIKVW 149 (213)
Q Consensus 88 -~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~~~~i~----------------~~v~~~~~~~~~~~l~~~~~dg~i~v~ 149 (213)
+++..+.+|...|-.++|+|. .+.|++++.|..+. ..|.+|.|+.+|.+|++.+.|..|+||
T Consensus 121 tepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tgeali~l~hpd~i~S~sfn~dGs~l~TtckDKkvRv~ 200 (472)
T KOG0303|consen 121 TEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGEALITLDHPDMVYSMSFNRDGSLLCTTCKDKKVRVI 200 (472)
T ss_pred ccceEEEeecceeEEEEeecccchhhHhhccCCceEEEEeccCCceeeecCCCCeEEEEEeccCCceeeeecccceeEEE
Confidence 567778899999999999995 46788888888876 679999999999999999999999999
Q ss_pred EccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEe----cCCcEEEEeCCCCccc
Q psy7433 150 SLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCG----ADGSMKVRQLPDRDAV 208 (213)
Q Consensus 150 d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~----~d~~i~iw~~~~~~~~ 208 (213)
|.++++.+..-.+|.. ..-..+-|-.++.+++.+ .+..+-+||-.+-.++
T Consensus 201 dpr~~~~v~e~~~heG---------~k~~Raifl~~g~i~tTGfsr~seRq~aLwdp~nl~eP 254 (472)
T KOG0303|consen 201 DPRRGTVVSEGVAHEG---------AKPARAIFLASGKIFTTGFSRMSERQIALWDPNNLEEP 254 (472)
T ss_pred cCCCCcEeeecccccC---------CCcceeEEeccCceeeeccccccccceeccCcccccCc
Confidence 9999999988877662 333444454444465554 4678899987765443
|
|
| >KOG0644|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=6.8e-19 Score=137.09 Aligned_cols=186 Identities=21% Similarity=0.323 Sum_probs=147.0
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEE
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVI 82 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iw 82 (213)
|.+|...|+|..|...|++++++ +.|..++||.+ .+..++....+|.+.++.++.+.+...+++++.|..|++|
T Consensus 186 LlgH~naVyca~fDrtg~~Iitg---sdd~lvKiwS~---et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvW 259 (1113)
T KOG0644|consen 186 LLGHRNAVYCAIFDRTGRYIITG---SDDRLVKIWSM---ETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVW 259 (1113)
T ss_pred HHhhhhheeeeeeccccceEeec---Cccceeeeeec---cchhhhccCCCCccccchhccchhhhhhhhcccCceEEEE
Confidence 67899999999999999999999 89999999998 7888999999999999999999999999999999999999
Q ss_pred eccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee---------------------eceEEEEEccCCc------
Q psy7433 83 DLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK---------------------SPVKCLAIDPHEE------ 135 (213)
Q Consensus 83 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~---------------------~~v~~~~~~~~~~------ 135 (213)
.+.++.++..+.+|.+.|++++|+|-. +.+.||+++ .-+.++.|...+.
T Consensus 260 rl~~~~pvsvLrghtgavtaiafsP~~----sss~dgt~~~wd~r~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~Tgs 335 (1113)
T KOG0644|consen 260 RLPDGAPVSVLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDARLEPRIYVPRPLKFTEKDLVDSILFENNGDRFLTGS 335 (1113)
T ss_pred ecCCCchHHHHhccccceeeeccCccc----cCCCCCceEeccccccccccCCCCCCcccccceeeeecccccccccccc
Confidence 999999999999999999999999954 455566554 1111122222222
Q ss_pred -------------------------------eEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCC
Q psy7433 136 -------------------------------FFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG 184 (213)
Q Consensus 136 -------------------------------~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 184 (213)
+.+++-.+..+.+|++.++.....+.+|. ..+.-+.++|
T Consensus 336 ~d~ea~n~e~~~l~~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~ghs----------d~~yvLd~Hp 405 (1113)
T KOG0644|consen 336 RDGEARNHEFEQLAWRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLMGHS----------DEVYVLDVHP 405 (1113)
T ss_pred CCcccccchhhHhhhhccceEEEeccccccccceeeeeeeEeeeeecccchhhhhhcccc----------cceeeeeecC
Confidence 22233334455666666666666666654 6788899998
Q ss_pred -CCe-EEEEecCCcEEEEeCCCCccc
Q psy7433 185 -GSR-LFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 185 -~~~-l~s~~~d~~i~iw~~~~~~~~ 208 (213)
+.+ ..+++.||+..|||+..+...
T Consensus 406 fn~ri~msag~dgst~iwdi~eg~pi 431 (1113)
T KOG0644|consen 406 FNPRIAMSAGYDGSTIIWDIWEGIPI 431 (1113)
T ss_pred CCcHhhhhccCCCceEeeecccCCcc
Confidence 444 578999999999999887544
|
|
| >KOG1009|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=8.4e-18 Score=121.23 Aligned_cols=177 Identities=18% Similarity=0.281 Sum_probs=130.5
Q ss_pred cCceEEEEEeCCCC-eEEEeeccCCCccEEEEeCCCcccc------cceeeeeeecCCceEEEEecCCCEEEEEcCCCcE
Q psy7433 7 NKITSDFVFLGSCS-LVATAGHSSESKNVCLWDSLLPQKK------ALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDI 79 (213)
Q Consensus 7 ~~~v~~~~~~~~~~-~l~~~g~~s~~~~i~iwd~~~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v 79 (213)
..+|..+.|.++.. .|||+| .|..|++|.++..... +.+..+..|...|+++.|+|+|++|++|+++|.+
T Consensus 13 ~~pv~s~dfq~n~~~~laT~G---~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v 89 (434)
T KOG1009|consen 13 HEPVYSVDFQKNSLNKLATAG---GDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEV 89 (434)
T ss_pred CCceEEEEeccCcccceeccc---CccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceE
Confidence 46899999999776 999994 8999999998543322 2344566799999999999999999999999999
Q ss_pred EEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCceeeceEEEEEccCCceEEEecCCCcEEEEEccCCeeeee
Q psy7433 80 CVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYN 159 (213)
Q Consensus 80 ~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~ 159 (213)
.+|-...-.. +. ..- .....+.. +++- -..+.....+..++|+|++.++++++.|+.+++||+..+.....
T Consensus 90 ~lWk~~~~~~---~~---~d~-e~~~~ke~-w~v~-k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~ 160 (434)
T KOG1009|consen 90 FLWKQGDVRI---FD---ADT-EADLNKEK-WVVK-KVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAI 160 (434)
T ss_pred EEEEecCcCC---cc---ccc-hhhhCccc-eEEE-EEecccccchhhhhccCCCceeeeeeccceEEEEEeccceeEee
Confidence 9997653111 00 000 11111111 1110 00001225678889999999999999999999999999999999
Q ss_pred ecCCCCceeEEEecCCCeEEEEeCCC-CeEEEEecCCcEEEEeCCCC
Q psy7433 160 FPGEHARSSFFKHIGQGVTQLHVDGG-SRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 160 ~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~d~~i~iw~~~~~ 205 (213)
+..|. ..+..++|.|- .++++-+.|...+.+.+...
T Consensus 161 ~~dh~----------~yvqgvawDpl~qyv~s~s~dr~~~~~~~~~~ 197 (434)
T KOG1009|consen 161 LDDHE----------HYVQGVAWDPLNQYVASKSSDRHPEGFSAKLK 197 (434)
T ss_pred ccccc----------cccceeecchhhhhhhhhccCcccceeeeeee
Confidence 98886 78999999994 56888888887777776544
|
|
| >KOG1587|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.7e-17 Score=126.49 Aligned_cols=187 Identities=17% Similarity=0.272 Sum_probs=139.9
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccc--ccee-eeeeecCCceEEEEecCC--CEEEEEcCCCcEEE
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKK--ALVQ-AFVCHDQGASSLVFAPQH--QLLISAGKKGDICV 81 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~--~~~~-~~~~~~~~v~~~~~~~~~--~~l~~~~~d~~v~i 81 (213)
...|.++.|+|....++.|| ..+|+|.+||++..... ..+. ....|..++..+.|..+. .-+++++.||.|..
T Consensus 242 ~s~v~~~~f~p~~p~ll~gG--~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~ 319 (555)
T KOG1587|consen 242 PSEVTCLKFCPFDPNLLAGG--CYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICS 319 (555)
T ss_pred CCceeEEEeccCCcceEEee--ccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccCCCCceEEEecCCcEee
Confidence 46799999999666555555 79999999999643321 1111 123578899999997643 45999999999999
Q ss_pred EeccCceE-EE-----ecc------cCCCCeeEEEecC-CCCEEEEecCCCcee-------------------------e
Q psy7433 82 IDLRQRVI-RS-----RFN------AHESPVKCLAIDP-HEEFFVTGAGDGDIK-------------------------S 123 (213)
Q Consensus 82 wd~~~~~~-~~-----~~~------~~~~~i~~~~~~~-~~~~l~~~~~~~~i~-------------------------~ 123 (213)
|+++.-.. .. ... .....+++++|.+ +...|++|++.|.+. +
T Consensus 320 W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g 399 (555)
T KOG1587|consen 320 WDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIG 399 (555)
T ss_pred eeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCcccccccccccccccccCc
Confidence 98865321 11 111 1234678999988 556899999999885 7
Q ss_pred ceEEEEEccCCceEEEecCCCcEEEEEcc-CCeeeeeecCCCCceeEEEecCCCeEEEEeCCC--CeEEEEecCCcEEEE
Q psy7433 124 PVKCLAIDPHEEFFVTGAGDGDIKVWSLS-GNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG--SRLFSCGADGSMKVR 200 (213)
Q Consensus 124 ~v~~~~~~~~~~~l~~~~~dg~i~v~d~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~l~s~~~d~~i~iw 200 (213)
+|.++.++|-+..++..+.|-++++|... ...++..+..+. ..+++++|+|. ..++++..||.+.+|
T Consensus 400 ~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~~----------~~v~~vaWSptrpavF~~~d~~G~l~iW 469 (555)
T KOG1587|consen 400 PVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSSP----------DYVTDVAWSPTRPAVFATVDGDGNLDIW 469 (555)
T ss_pred ceEeeecCCCccceeeeeccceeEeccccCCCCcchhhhhcc----------ceeeeeEEcCcCceEEEEEcCCCceehh
Confidence 89999999987755544449999999987 667777776654 56999999994 468999999999999
Q ss_pred eCCCC
Q psy7433 201 QLPDR 205 (213)
Q Consensus 201 ~~~~~ 205 (213)
|+...
T Consensus 470 DLl~~ 474 (555)
T KOG1587|consen 470 DLLQD 474 (555)
T ss_pred hhhcc
Confidence 99754
|
|
| >KOG1188|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.3e-17 Score=115.32 Aligned_cols=175 Identities=15% Similarity=0.271 Sum_probs=133.3
Q ss_pred eEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec--CCCEEEEEcCCCcEEEEeccCceEEE--ecccC
Q psy7433 21 LVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP--QHQLLISAGKKGDICVIDLRQRVIRS--RFNAH 96 (213)
Q Consensus 21 ~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~v~iwd~~~~~~~~--~~~~~ 96 (213)
.+|++ -.+|.|++||. .+++.+..+++++..++.++|.. ....+.+++.||+|++||+|+..... .+..+
T Consensus 42 ~vav~---lSngsv~lyd~---~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~ 115 (376)
T KOG1188|consen 42 AVAVS---LSNGSVRLYDK---GTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQ 115 (376)
T ss_pred eEEEE---ecCCeEEEEec---cchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCC
Confidence 46665 58999999998 67888999999999999999976 45789999999999999999864433 33334
Q ss_pred C-CCeeEEEecCCCCEEEEecCCCcee-----------------------eceEEEEEccCC-ceEEEecCCCcEEEEEc
Q psy7433 97 E-SPVKCLAIDPHEEFFVTGAGDGDIK-----------------------SPVKCLAIDPHE-EFFVTGAGDGDIKVWSL 151 (213)
Q Consensus 97 ~-~~i~~~~~~~~~~~l~~~~~~~~i~-----------------------~~v~~~~~~~~~-~~l~~~~~dg~i~v~d~ 151 (213)
+ .+..+++.+-.++.+++|.+--... ..|+++.|+|+. ++|++|+.||-|.+||+
T Consensus 116 ~~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~ 195 (376)
T KOG1188|consen 116 SGTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDT 195 (376)
T ss_pred CCCcceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeec
Confidence 3 4667888776777888776533221 789999999975 49999999999999999
Q ss_pred cCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC--eEEEEecCCcEEEEeCCCCccc
Q psy7433 152 SGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS--RLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
+.....-.+. ....++..|.++.|..++ ++.+-+......+|++..+...
T Consensus 196 ~~d~EeDaL~-------~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~~ 247 (376)
T KOG1188|consen 196 KKDNEEDALL-------HVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSEE 247 (376)
T ss_pred CCCcchhhHH-------HhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCChh
Confidence 7542211111 111223679999998765 6999999999999999987643
|
|
| >KOG1188|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.8e-17 Score=117.17 Aligned_cols=150 Identities=15% Similarity=0.245 Sum_probs=114.4
Q ss_pred ccccccCceEEEEEeC--CCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeec-CCceEEEEecCCCEEEEEc----
Q psy7433 2 TYQCHNKITSDFVFLG--SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHD-QGASSLVFAPQHQLLISAG---- 74 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~--~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~---- 74 (213)
.+++|...++.++|.. ....+.++ +.||+|++||++.......+. +..+. .+..+++.+.+++.+++|.
T Consensus 65 ~fk~~~~~~N~vrf~~~ds~h~v~s~---ssDG~Vr~wD~Rs~~e~a~~~-~~~~~~~~f~~ld~nck~~ii~~GtE~~~ 140 (376)
T KOG1188|consen 65 EFKGPPATTNGVRFISCDSPHGVISC---SSDGTVRLWDIRSQAESARIS-WTQQSGTPFICLDLNCKKNIIACGTELTR 140 (376)
T ss_pred eecCCCCcccceEEecCCCCCeeEEe---ccCCeEEEEEeecchhhhhee-ccCCCCCcceEeeccCcCCeEEecccccc
Confidence 4678888999999987 45677777 799999999997543333332 33333 4667777776788888775
Q ss_pred CCCcEEEEeccCceE-EEec-ccCCCCeeEEEecC-CCCEEEEecCCCcee--------------------eceEEEEEc
Q psy7433 75 KKGDICVIDLRQRVI-RSRF-NAHESPVKCLAIDP-HEEFFVTGAGDGDIK--------------------SPVKCLAID 131 (213)
Q Consensus 75 ~d~~v~iwd~~~~~~-~~~~-~~~~~~i~~~~~~~-~~~~l~~~~~~~~i~--------------------~~v~~~~~~ 131 (213)
.+-.|.+||+|..+. +..+ ..|.+.|++++|+| +.+.|++|+.||.+. ..|.++.|.
T Consensus 141 s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~EeDaL~~viN~~sSI~~igw~ 220 (376)
T KOG1188|consen 141 SDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNEEDALLHVINHGSSIHLIGWL 220 (376)
T ss_pred CceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCCcchhhHHHhhcccceeeeeeee
Confidence 467799999998754 4444 56999999999999 567899999999886 679999998
Q ss_pred cCC-ceEEEecCCCcEEEEEccCCe
Q psy7433 132 PHE-EFFVTGAGDGDIKVWSLSGNH 155 (213)
Q Consensus 132 ~~~-~~l~~~~~dg~i~v~d~~~~~ 155 (213)
.++ +.|.+-+......+|+++.+.
T Consensus 221 ~~~ykrI~clTH~Etf~~~ele~~~ 245 (376)
T KOG1188|consen 221 SKKYKRIMCLTHMETFAIYELEDGS 245 (376)
T ss_pred cCCcceEEEEEccCceeEEEccCCC
Confidence 876 347777778889999987553
|
|
| >KOG0650|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.5e-17 Score=125.35 Aligned_cols=186 Identities=20% Similarity=0.290 Sum_probs=151.8
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEec
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDL 84 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~ 84 (213)
.|.++|+.+.|+..|+||++.-..+....|.|.++ .+...+..|+...+.+.++.|+|...+|+.++. ..|++||+
T Consensus 519 ~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQL---SK~~sQ~PF~kskG~vq~v~FHPs~p~lfVaTq-~~vRiYdL 594 (733)
T KOG0650|consen 519 KHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQL---SKRKSQSPFRKSKGLVQRVKFHPSKPYLFVATQ-RSVRIYDL 594 (733)
T ss_pred ecCCccceeeeecCCceEEEeccCCCcceEEEEec---ccccccCchhhcCCceeEEEecCCCceEEEEec-cceEEEeh
Confidence 47889999999999999999854345678999998 455555556556778999999999989988865 58999999
Q ss_pred cCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee------------------eceEEEEEccCCceEEEecCCCcE
Q psy7433 85 RQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------SPVKCLAIDPHEEFFVTGAGDGDI 146 (213)
Q Consensus 85 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------~~v~~~~~~~~~~~l~~~~~dg~i 146 (213)
...+.+.++......|..++.+|.|..++.++.|+.+. ..+++++|++.-.++++|+.||.+
T Consensus 595 ~kqelvKkL~tg~kwiS~msihp~GDnli~gs~d~k~~WfDldlsskPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv 674 (733)
T KOG0650|consen 595 SKQELVKKLLTGSKWISSMSIHPNGDNLILGSYDKKMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTV 674 (733)
T ss_pred hHHHHHHHHhcCCeeeeeeeecCCCCeEEEecCCCeeEEEEcccCcchhHHhhhhhhhhhhhhhccccceeeeecCCCcE
Confidence 88877777776777899999999999999999999876 788999999999999999999999
Q ss_pred EEEEcc-------CC--eeeeeecCCCCceeEEEecCCCeEEEEeCC-CCeEEEEecCCcEEEE
Q psy7433 147 KVWSLS-------GN--HLLYNFPGEHARSSFFKHIGQGVTQLHVDG-GSRLFSCGADGSMKVR 200 (213)
Q Consensus 147 ~v~d~~-------~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~s~~~d~~i~iw 200 (213)
.||.-. +. -++..+.+|.... ...|..+.|+| ...|++++.||.|++|
T Consensus 675 ~Vfhg~VY~Dl~qnpliVPlK~L~gH~~~~------~~gVLd~~wHP~qpWLfsAGAd~tirlf 732 (733)
T KOG0650|consen 675 IVFHGMVYNDLLQNPLIVPLKRLRGHEKTN------DLGVLDTIWHPRQPWLFSAGADGTIRLF 732 (733)
T ss_pred EEEeeeeehhhhcCCceEeeeeccCceeec------ccceEeecccCCCceEEecCCCceEEee
Confidence 998532 11 2455666665321 24588889999 4689999999999998
|
|
| >KOG2394|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.2e-17 Score=121.65 Aligned_cols=111 Identities=16% Similarity=0.312 Sum_probs=76.4
Q ss_pred cCceEEEEEeCCCC-eEEEeeccCCCccEEEEeCCCc-------------------------ccccceeeeeeecCCceE
Q psy7433 7 NKITSDFVFLGSCS-LVATAGHSSESKNVCLWDSLLP-------------------------QKKALVQAFVCHDQGASS 60 (213)
Q Consensus 7 ~~~v~~~~~~~~~~-~l~~~g~~s~~~~i~iwd~~~~-------------------------~~~~~~~~~~~~~~~v~~ 60 (213)
+..|+|+.|-|.+. .++.. -.+|.+.+||.+.. ....++..+..-...|+.
T Consensus 219 ktsvT~ikWvpg~~~~Fl~a---~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~ 295 (636)
T KOG2394|consen 219 KSSVTCIKWVPGSDSLFLVA---HASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWHIGEGSINE 295 (636)
T ss_pred ccceEEEEEEeCCCceEEEE---EecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCccceeEeccccccc
Confidence 36799999999444 33333 48999999975311 000122223333457899
Q ss_pred EEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCc
Q psy7433 61 LVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGD 120 (213)
Q Consensus 61 ~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~ 120 (213)
.+|+|||++||+.+.||.++|||..+.+.+..++..-+...|++|+|||+++++|++|..
T Consensus 296 f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDL 355 (636)
T KOG2394|consen 296 FAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDL 355 (636)
T ss_pred eeEcCCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecCCcce
Confidence 999999999999999999999999998877777666566666666666554444444443
|
|
| >KOG0290|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.6e-16 Score=110.50 Aligned_cols=186 Identities=17% Similarity=0.254 Sum_probs=131.0
Q ss_pred cccCceEEEEEeC-CCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCC-CEEEEEcCCCcEEEE
Q psy7433 5 CHNKITSDFVFLG-SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQH-QLLISAGKKGDICVI 82 (213)
Q Consensus 5 ~h~~~v~~~~~~~-~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~iw 82 (213)
.+.++++++.|+. +-+++.++ |-|.+..|||++.+..+.....+-+|..+|..++|...+ +.+++.+.||.+++|
T Consensus 148 ~~~aPlTSFDWne~dp~~igtS---SiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmF 224 (364)
T KOG0290|consen 148 EFCAPLTSFDWNEVDPNLIGTS---SIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMF 224 (364)
T ss_pred ccCCcccccccccCCcceeEee---cccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEE
Confidence 3567899999998 66788888 899999999996443444566678899999999999855 578999999999999
Q ss_pred eccCceE---EEecccCCCCeeEEEecCC-CCEEEEecCCCcee-------------------eceEEEEEccCCc-eEE
Q psy7433 83 DLRQRVI---RSRFNAHESPVKCLAIDPH-EEFFVTGAGDGDIK-------------------SPVKCLAIDPHEE-FFV 138 (213)
Q Consensus 83 d~~~~~~---~~~~~~~~~~i~~~~~~~~-~~~l~~~~~~~~i~-------------------~~v~~~~~~~~~~-~l~ 138 (213)
|++..+. +..-+....+...++|+++ .+++++-..|..-. +.|+.++|.|... .|+
T Consensus 225 DLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hic 304 (364)
T KOG0290|consen 225 DLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHIC 304 (364)
T ss_pred EecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceee
Confidence 9997643 2222223567888999884 45566555544211 8899999999654 899
Q ss_pred EecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCC--CCeEEEEecCCcEEE
Q psy7433 139 TGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG--GSRLFSCGADGSMKV 199 (213)
Q Consensus 139 ~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~l~s~~~d~~i~i 199 (213)
+++.|....+||+...-.. ... ........++.|+.+.|++ .+.++.+ .++++.+
T Consensus 305 taGDD~qaliWDl~q~~~~----~~~-dPilay~a~~EVNqi~Ws~~~~Dwiai~-~~kklei 361 (364)
T KOG0290|consen 305 TAGDDCQALIWDLQQMPRE----NGE-DPILAYTAGGEVNQIQWSSSQPDWIAIC-FGKKLEI 361 (364)
T ss_pred ecCCcceEEEEeccccccc----CCC-CchhhhhccceeeeeeecccCCCEEEEE-ecCeeeE
Confidence 9999999999999643220 000 0000111237899999997 3345544 4444443
|
|
| >KOG1034|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.3e-16 Score=112.48 Aligned_cols=168 Identities=20% Similarity=0.327 Sum_probs=132.9
Q ss_pred cccccCceEEEEEeC-----CCCeEEEeeccCCCccEEEEeCCCcccccceeeee--eecCCceEEEEecC----CCEEE
Q psy7433 3 YQCHNKITSDFVFLG-----SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV--CHDQGASSLVFAPQ----HQLLI 71 (213)
Q Consensus 3 l~~h~~~v~~~~~~~-----~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~~~~----~~~l~ 71 (213)
.+.|+.+|..++|++ .-..+|+. ....+.+|..........+.... .|++....++|+-+ ..+++
T Consensus 34 ~ed~~~~I~gv~fN~~~~~~e~~vfatv----G~~rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~~~~p~la 109 (385)
T KOG1034|consen 34 KEDHNKPIFGVAFNSFLGCDEPQVFATV----GGNRVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSNTGNPFLA 109 (385)
T ss_pred hccCCCccceeeeehhcCCCCCceEEEe----CCcEEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCCCCCeeEE
Confidence 457899999999996 33456776 46789999874221112232222 35677888899753 35788
Q ss_pred EEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCceeeceEEEEEccCCceEEEecCCCcEEEEEc
Q psy7433 72 SAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSL 151 (213)
Q Consensus 72 ~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~ 151 (213)
+++.-|.|++.|+.+++....+.+|...|..+.+.|+.. +++++++.|..|++|++
T Consensus 110 ~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~------------------------qlvls~SkD~svRlwnI 165 (385)
T KOG1034|consen 110 AGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRP------------------------QLVLSASKDHSVRLWNI 165 (385)
T ss_pred eecceeEEEEEecchhhhccceeccCccchhhhcCCCCC------------------------cEEEEecCCceEEEEec
Confidence 999999999999999999999999999999999999753 68999999999999999
Q ss_pred cCCeeeeeecCCCCceeEEEecCCCeEEEEeCCC-CeEEEEecCCcEEEEeCCCC
Q psy7433 152 SGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG-SRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~d~~i~iw~~~~~ 205 (213)
++..++..+.+-. .|...|.++.|+++ .++++++.|.++++|++...
T Consensus 166 ~~~~Cv~VfGG~e-------gHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~ 213 (385)
T KOG1034|consen 166 QTDVCVAVFGGVE-------GHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVK 213 (385)
T ss_pred cCCeEEEEecccc-------cccCcEEEEEEcCCCCeeeccCCcceEEEEecChh
Confidence 9999998876532 22378999999985 47999999999999999844
|
|
| >KOG2919|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.5e-16 Score=111.02 Aligned_cols=189 Identities=17% Similarity=0.270 Sum_probs=145.3
Q ss_pred eEEEEEeCCCCeEEEeeccCCCccEEEEeCCCc----c-cc----cceeeeee-ecCCceEEEEe-------cCCCEEEE
Q psy7433 10 TSDFVFLGSCSLVATAGHSSESKNVCLWDSLLP----Q-KK----ALVQAFVC-HDQGASSLVFA-------PQHQLLIS 72 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~----~-~~----~~~~~~~~-~~~~v~~~~~~-------~~~~~l~~ 72 (213)
...+.|+|||..|++- +.|..+.+|++... . .. +....++- ....|...+|- |+.+++++
T Consensus 52 ~kgckWSPDGSciL~~---sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~ 128 (406)
T KOG2919|consen 52 LKGCKWSPDGSCILSL---SEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAV 128 (406)
T ss_pred hccceeCCCCceEEee---cccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeee
Confidence 4568899999999998 89999999998311 0 00 11111111 23456677775 56779999
Q ss_pred EcCCCcEEEEeccCceEEEecccC--CC---CeeEEEecCCCCEEEEecCCCcee-------------------------
Q psy7433 73 AGKKGDICVIDLRQRVIRSRFNAH--ES---PVKCLAIDPHEEFFVTGAGDGDIK------------------------- 122 (213)
Q Consensus 73 ~~~d~~v~iwd~~~~~~~~~~~~~--~~---~i~~~~~~~~~~~l~~~~~~~~i~------------------------- 122 (213)
.+.+.-|++||.-+|+....+.+. .. ...+++|+|||.+|.+|... .|+
T Consensus 129 ssr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGykr-cirvFdt~RpGr~c~vy~t~~~~k~gq~ 207 (406)
T KOG2919|consen 129 SSRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGYKR-CIRVFDTSRPGRDCPVYTTVTKGKFGQK 207 (406)
T ss_pred ccccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeecccc-eEEEeeccCCCCCCcchhhhhccccccc
Confidence 999999999999999888777653 22 35699999999998876543 333
Q ss_pred eceEEEEEccCCc-eEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCC-CeEEEEe-cCCcEEE
Q psy7433 123 SPVKCLAIDPHEE-FFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG-SRLFSCG-ADGSMKV 199 (213)
Q Consensus 123 ~~v~~~~~~~~~~-~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~-~d~~i~i 199 (213)
+-+.+++|+|-.. .+++|+.-..+-||.-....+++.+.+|. +.|+.+.|.++ ++|++|+ .|..|-.
T Consensus 208 giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~----------gGvThL~~~edGn~lfsGaRk~dkIl~ 277 (406)
T KOG2919|consen 208 GIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHG----------GGVTHLQWCEDGNKLFSGARKDDKILC 277 (406)
T ss_pred ceeeeeeccCCCCcceeeecccceeeeEecCCCCceeeecccC----------CCeeeEEeccCcCeecccccCCCeEEE
Confidence 6789999999654 89999999999999888889999988876 89999999985 5788887 4779999
Q ss_pred EeCCCCccccccC
Q psy7433 200 RQLPDRDAVVHTL 212 (213)
Q Consensus 200 w~~~~~~~~~~~l 212 (213)
||++....++..|
T Consensus 278 WDiR~~~~pv~~L 290 (406)
T KOG2919|consen 278 WDIRYSRDPVYAL 290 (406)
T ss_pred Eeehhccchhhhh
Confidence 9999877665544
|
|
| >KOG1524|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.1e-17 Score=124.85 Aligned_cols=135 Identities=20% Similarity=0.327 Sum_probs=108.5
Q ss_pred CeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCCCC
Q psy7433 20 SLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESP 99 (213)
Q Consensus 20 ~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~ 99 (213)
..|+.+ +.||.+.+.+ ..++..+.+.+|.+.+.+-.|+|+|.-|++++.||.|++|. ++|-....+.....+
T Consensus 76 d~~~i~---s~DGkf~il~----k~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWS-rsGMLRStl~Q~~~~ 147 (737)
T KOG1524|consen 76 DTLLIC---SNDGRFVILN----KSARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWS-RSGMLRSTVVQNEES 147 (737)
T ss_pred ceEEEE---cCCceEEEec----ccchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEe-ccchHHHHHhhcCce
Confidence 356666 6899999998 57788888899999999999999999999999999999997 455444445556778
Q ss_pred eeEEEecCCCCEEEEecCCCce-e---------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCC
Q psy7433 100 VKCLAIDPHEEFFVTGAGDGDI-K---------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGE 163 (213)
Q Consensus 100 i~~~~~~~~~~~l~~~~~~~~i-~---------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~ 163 (213)
|.|++|.|+.+.++.+..+... + +-|.++.|+|...++++|++|-..++||-. |..++.-..|
T Consensus 148 v~c~~W~p~S~~vl~c~g~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~-G~~Lf~S~~~ 226 (737)
T KOG1524|consen 148 IRCARWAPNSNSIVFCQGGHISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQ-GANLFTSAAE 226 (737)
T ss_pred eEEEEECCCCCceEEecCCeEEEeecccccceeEEeccCcEEEEeecCccccceeecCCceeEEeeccc-CcccccCChh
Confidence 9999999988776666555433 2 778999999999999999999999999964 3444443333
|
|
| >KOG4227|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.9e-16 Score=114.42 Aligned_cols=200 Identities=11% Similarity=0.126 Sum_probs=148.5
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCc---ccccceeeee-eecCCceEEEEecCCCEEEEEcCCCc
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLP---QKKALVQAFV-CHDQGASSLVFAPQHQLLISAGKKGD 78 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~---~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~ 78 (213)
+.+|.+.|+++.|+.++++||+| ..|..+++|+++.. ...+++.... .|...|.+++|...+..+++|+.+++
T Consensus 52 ~~~H~GCiNAlqFS~N~~~L~SG---GDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~ 128 (609)
T KOG4227|consen 52 VREHTGCINALQFSHNDRFLASG---GDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGT 128 (609)
T ss_pred hhhhccccceeeeccCCeEEeec---CCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcce
Confidence 56899999999999999999999 48999999998421 1223333322 35689999999999999999999999
Q ss_pred EEEEeccCceEEEeccc--CCCCeeEEEecCCCCEEEEecCCCcee--------------------eceEEEEEccCCc-
Q psy7433 79 ICVIDLRQRVIRSRFNA--HESPVKCLAIDPHEEFFVTGAGDGDIK--------------------SPVKCLAIDPHEE- 135 (213)
Q Consensus 79 v~iwd~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~~~~i~--------------------~~v~~~~~~~~~~- 135 (213)
|.+-|+++.+.+..+.. ..+.|..+..+|..+.|++.+.++.+. .....+.|+|...
T Consensus 129 VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~P~ 208 (609)
T KOG4227|consen 129 VIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPETPA 208 (609)
T ss_pred eEeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeecCCCce
Confidence 99999999988776642 345899999999999999999999875 4567788998755
Q ss_pred eEEEecCCCcEEEEEccCCee-e----------------------------eeec---------CCCCceeEEEec----
Q psy7433 136 FFVTGAGDGDIKVWSLSGNHL-L----------------------------YNFP---------GEHARSSFFKHI---- 173 (213)
Q Consensus 136 ~l~~~~~dg~i~v~d~~~~~~-~----------------------------~~~~---------~~~~~~~~~~~~---- 173 (213)
+|++.+..+-+-+||.+.... + ..+. -+......++..
T Consensus 209 Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R~~V~k~D~N~~ 288 (609)
T KOG4227|consen 209 LILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQRCFVLKSDHNPN 288 (609)
T ss_pred eEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCCEEeeeecccceeEeccCCCC
Confidence 788888889999999874310 0 0000 011111111111
Q ss_pred ----CCCeEEEEeCCCCeEEEEecCCcEEEEeCCCC
Q psy7433 174 ----GQGVTQLHVDGGSRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 174 ----~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 205 (213)
...+.+++|..+..+++|+.+-.|++|.+...
T Consensus 289 GY~N~~T~KS~~F~~D~~v~tGSD~~~i~~WklP~~ 324 (609)
T KOG4227|consen 289 GYCNIKTIKSMTFIDDYTVATGSDHWGIHIWKLPRA 324 (609)
T ss_pred cceeeeeeeeeeeecceeeeccCcccceEEEecCCC
Confidence 13466777776666999999999999998754
|
|
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.9e-16 Score=106.37 Aligned_cols=152 Identities=14% Similarity=0.241 Sum_probs=101.2
Q ss_pred EEEEeCCCCeEEEeecc-------CCCccEEEEeCCCcccccceeeeee-ecCCceEEEEecCCCEEEEE--cCCCcEEE
Q psy7433 12 DFVFLGSCSLVATAGHS-------SESKNVCLWDSLLPQKKALVQAFVC-HDQGASSLVFAPQHQLLISA--GKKGDICV 81 (213)
Q Consensus 12 ~~~~~~~~~~l~~~g~~-------s~~~~i~iwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~--~~d~~v~i 81 (213)
.+.|+|+|++|+.--.. +.-+...+|.++. .......+.. ..++|.+++|+|+++.++.. ..++.|.+
T Consensus 10 ~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~--~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~l 87 (194)
T PF08662_consen 10 KLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNE--KNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTL 87 (194)
T ss_pred EEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEec--CCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEE
Confidence 57899999987765210 0123456666632 2223333332 34569999999999987654 45679999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCceeeceEEEEEccCCceEEEec---CCCcEEEEEccCCeeee
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPHEEFFVTGA---GDGDIKVWSLSGNHLLY 158 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~~~~l~~~~---~dg~i~v~d~~~~~~~~ 158 (213)
||++ ++.+..+. ...+..+.|+|+| +++++++ ..|.|.+||+++.+.+.
T Consensus 88 yd~~-~~~i~~~~--~~~~n~i~wsP~G-------------------------~~l~~~g~~n~~G~l~~wd~~~~~~i~ 139 (194)
T PF08662_consen 88 YDVK-GKKIFSFG--TQPRNTISWSPDG-------------------------RFLVLAGFGNLNGDLEFWDVRKKKKIS 139 (194)
T ss_pred EcCc-ccEeEeec--CCCceEEEECCCC-------------------------CEEEEEEccCCCcEEEEEECCCCEEee
Confidence 9996 55554443 3444555555555 5555543 34789999999888887
Q ss_pred eecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEe------cCCcEEEEeCCCC
Q psy7433 159 NFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCG------ADGSMKVRQLPDR 205 (213)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~------~d~~i~iw~~~~~ 205 (213)
.... ..++.++|+|+++ |+++. .|+.++||++...
T Consensus 140 ~~~~------------~~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~G~ 181 (194)
T PF08662_consen 140 TFEH------------SDATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQGR 181 (194)
T ss_pred cccc------------CcEEEEEEcCCCCEEEEEEeccceeccccEEEEEecCe
Confidence 7654 3588999999875 66654 3889999999654
|
|
| >KOG0649|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.2e-16 Score=108.63 Aligned_cols=139 Identities=23% Similarity=0.413 Sum_probs=116.2
Q ss_pred CceEEEEecCCCEEEEEcCCCcEEEEeccCc----------eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee----
Q psy7433 57 GASSLVFAPQHQLLISAGKKGDICVIDLRQR----------VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK---- 122 (213)
Q Consensus 57 ~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~----------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~---- 122 (213)
.|.+-+|+|.+++|++|+.+|.|.+..+.+- .++...++|.+++..++|. ..+|++|+ ||.++
T Consensus 12 tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~--d~~Lls~g-dG~V~gw~W 88 (325)
T KOG0649|consen 12 TVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFH--DDFLLSGG-DGLVYGWEW 88 (325)
T ss_pred HHHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeee--hhheeecc-CceEEEeee
Confidence 3566689999999999999999999988641 3445567899999999998 44555555 48876
Q ss_pred --------------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCC
Q psy7433 123 --------------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQG 176 (213)
Q Consensus 123 --------------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (213)
..|++|...|..+-++.++.|+.++-||+++++...++++|. ..
T Consensus 89 ~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHt----------DY 158 (325)
T KOG0649|consen 89 NEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHT----------DY 158 (325)
T ss_pred hhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCc----------ce
Confidence 578999999987767777799999999999999999999997 78
Q ss_pred eEEEEe-CCCCeEEEEecCCcEEEEeCCCCccc
Q psy7433 177 VTQLHV-DGGSRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 177 v~~~~~-~~~~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
|.++.- +..+.+++|+.||++|+||.++++.+
T Consensus 159 vH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v 191 (325)
T KOG0649|consen 159 VHSVVGRNANGQILSGAEDGTVRVWDTKTQKHV 191 (325)
T ss_pred eeeeeecccCcceeecCCCccEEEEecccccee
Confidence 999988 44678999999999999999988654
|
|
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.1e-16 Score=120.12 Aligned_cols=182 Identities=13% Similarity=0.080 Sum_probs=122.3
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEc-CCCcEEE
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG-KKGDICV 81 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~i 81 (213)
+..|...+.+.+|+|+|+.|+.++....+..|++||++.. ..+.+..+. +....++|+|+|+.|+.+. .+|.+.|
T Consensus 199 lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg-~~~~l~~~~---g~~~~~~wSPDG~~La~~~~~~g~~~I 274 (429)
T PRK01742 199 VNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSG-ARKVVASFR---GHNGAPAFSPDGSRLAFASSKDGVLNI 274 (429)
T ss_pred eccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCC-ceEEEecCC---CccCceeECCCCCEEEEEEecCCcEEE
Confidence 4566778999999999999998743223357999998432 112333333 3345689999999888764 6776655
Q ss_pred E--eccCceEEEecccCCCCeeEEEecCCCCEEEEec-CCCcee--------ece-------EEEEEccCCceEEEecCC
Q psy7433 82 I--DLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGA-GDGDIK--------SPV-------KCLAIDPHEEFFVTGAGD 143 (213)
Q Consensus 82 w--d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~~~~i~--------~~v-------~~~~~~~~~~~l~~~~~d 143 (213)
| |+.+++. ..+..+...+....|+|+++.++..+ .++... ... ....|+|+|++++..+.+
T Consensus 275 y~~d~~~~~~-~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l~~~~~~~~~SpDG~~ia~~~~~ 353 (429)
T PRK01742 275 YVMGANGGTP-SQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLVGGRGYSAQISADGKTLVMINGD 353 (429)
T ss_pred EEEECCCCCe-EeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEecCCCCCccCCCCCCEEEEEcCC
Confidence 5 6655553 44555666788999999999877655 344332 000 356799999999888776
Q ss_pred CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeC
Q psy7433 144 GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQL 202 (213)
Q Consensus 144 g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~ 202 (213)
+ +.+||+.+++........ ....+.|+|++ .|+.++.++...+|++
T Consensus 354 ~-i~~~Dl~~g~~~~lt~~~------------~~~~~~~sPdG~~i~~~s~~g~~~~l~~ 400 (429)
T PRK01742 354 N-VVKQDLTSGSTEVLSSTF------------LDESPSISPNGIMIIYSSTQGLGKVLQL 400 (429)
T ss_pred C-EEEEECCCCCeEEecCCC------------CCCCceECCCCCEEEEEEcCCCceEEEE
Confidence 5 556999877654322221 12456799976 4788888888888775
|
|
| >KOG4328|consensus | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.1e-16 Score=117.16 Aligned_cols=198 Identities=19% Similarity=0.169 Sum_probs=146.5
Q ss_pred ccccccCceEEEEEeC-CCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEE
Q psy7433 2 TYQCHNKITSDFVFLG-SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDIC 80 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~-~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 80 (213)
.+..|.++|.+|.|+| +...+.+. |.||+|++-|++.. ....+..+......+..+.|+.+...++.+..=|...
T Consensus 229 ~f~~hs~~Vs~l~F~P~n~s~i~ss---SyDGtiR~~D~~~~-i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~ 304 (498)
T KOG4328|consen 229 LFTPHSGPVSGLKFSPANTSQIYSS---SYDGTIRLQDFEGN-ISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFN 304 (498)
T ss_pred EeccCCccccceEecCCChhheeee---ccCceeeeeeecch-hhHHHhhcCccceeeeeccccCCCccEEEeecccceE
Confidence 3567999999999999 55567777 79999999999532 2233333333455677888888777777777777999
Q ss_pred EEeccCceE-EEecccCCCCeeEEEecCCC-CEEEEecCCCcee---------------------eceEEEEEccCCceE
Q psy7433 81 VIDLRQRVI-RSRFNAHESPVKCLAIDPHE-EFFVTGAGDGDIK---------------------SPVKCLAIDPHEEFF 137 (213)
Q Consensus 81 iwd~~~~~~-~~~~~~~~~~i~~~~~~~~~-~~l~~~~~~~~i~---------------------~~v~~~~~~~~~~~l 137 (213)
+||++++.. ...+.-|...|.+++++|.. .+|++++.|++.+ ..|.+..|||++-.|
T Consensus 305 ~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl 384 (498)
T KOG4328|consen 305 VIDLRTDGSEYENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTL 384 (498)
T ss_pred EEEeecCCccchhhhhhhcccceeecCCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCce
Confidence 999998754 55566688899999999954 5789999999885 578999999998889
Q ss_pred EEecCCCcEEEEEcc----CCeeeeeecCCCCceeEEEecCCCeEEEEeCCC-CeEEEEecCCcEEEEeCCCCccc
Q psy7433 138 VTGAGDGDIKVWSLS----GNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG-SRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 138 ~~~~~dg~i~v~d~~----~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
++.+.|..|+|||.. ..++...+........ --......|.|+ .++++|..-..|-|+|-..++.+
T Consensus 385 ~TT~~D~~IRv~dss~~sa~~~p~~~I~Hn~~t~R-----wlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q~v 455 (498)
T KOG4328|consen 385 LTTCQDNEIRVFDSSCISAKDEPLGTIPHNNRTGR-----WLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQMV 455 (498)
T ss_pred EeeccCCceEEeecccccccCCccceeeccCcccc-----cccchhheeCCCccEEEEeccCcceeEEcCCCCEEe
Confidence 999999999999983 3333333322111000 023456789985 46888888999999998887633
|
|
| >KOG1524|consensus | Back alignment and domain information |
|---|
Probab=99.73 E-value=1e-16 Score=119.83 Aligned_cols=167 Identities=17% Similarity=0.240 Sum_probs=129.8
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEE
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVI 82 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iw 82 (213)
..+|.+.+.+-+|+|+|.-|+++| +||.|++|.- .+....++.....+|.|++|.|+++.++.+.. +.+.|=
T Consensus 100 v~AH~~A~~~gRW~~dGtgLlt~G---EDG~iKiWSr----sGMLRStl~Q~~~~v~c~~W~p~S~~vl~c~g-~h~~IK 171 (737)
T KOG1524|consen 100 ISAHAAAISSGRWSPDGAGLLTAG---EDGVIKIWSR----SGMLRSTVVQNEESIRCARWAPNSNSIVFCQG-GHISIK 171 (737)
T ss_pred hhhhhhhhhhcccCCCCceeeeec---CCceEEEEec----cchHHHHHhhcCceeEEEEECCCCCceEEecC-CeEEEe
Confidence 568999999999999999999994 8999999993 44444444445678999999998876666533 466666
Q ss_pred eccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee----------------eceEEEEEccCCceEEEecCCCcE
Q psy7433 83 DLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----------------SPVKCLAIDPHEEFFVTGAGDGDI 146 (213)
Q Consensus 83 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------~~v~~~~~~~~~~~l~~~~~dg~i 146 (213)
-+.....+-+.+.|.+-|.++.|+|..+.+++|++|-..+ .+|++++|+|+ +.++.++.+ ++
T Consensus 172 pL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~G~~Lf~S~~~ey~ITSva~npd-~~~~v~S~n-t~ 249 (737)
T KOG1524|consen 172 PLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQGANLFTSAAEEYAITSVAFNPE-KDYLLWSYN-TA 249 (737)
T ss_pred ecccccceeEEeccCcEEEEeecCccccceeecCCceeEEeecccCcccccCChhccceeeeeeccc-cceeeeeee-ee
Confidence 6666666667788999999999999999999999998776 89999999999 666666543 33
Q ss_pred EEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEecCCcEEEE
Q psy7433 147 KVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGADGSMKVR 200 (213)
Q Consensus 147 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~d~~i~iw 200 (213)
+ +..+. .+.|..++|++|+. ++.|...|.+.+=
T Consensus 250 R------------~~~p~---------~GSifnlsWS~DGTQ~a~gt~~G~v~~A 283 (737)
T KOG1524|consen 250 R------------FSSPR---------VGSIFNLSWSADGTQATCGTSTGQLIVA 283 (737)
T ss_pred e------------ecCCC---------ccceEEEEEcCCCceeeccccCceEEEe
Confidence 3 22222 27899999999875 7777777876653
|
|
| >COG2319 FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.73 E-value=1e-14 Score=111.30 Aligned_cols=188 Identities=26% Similarity=0.483 Sum_probs=150.5
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCC-CccEEEEeCCCcccccceeeeeeecCCceEEEEecCCC-EEEEEcCCCcE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSE-SKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQ-LLISAGKKGDI 79 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~-~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v 79 (213)
.+..|...|.++.|+|++..++.+ +. ++.+++|+. .....+..+..|...+.+++|+|++. .+++++.|+.+
T Consensus 150 ~~~~~~~~v~~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i 223 (466)
T COG2319 150 TLEGHSESVTSLAFSPDGKLLASG---SSLDGTIKLWDL---RTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTI 223 (466)
T ss_pred EEecCcccEEEEEECCCCCEEEec---CCCCCceEEEEc---CCCceEEeeccCCCceEEEEEcCCcceEEEEecCCCcE
Confidence 356899999999999999988888 44 999999998 44667777777999999999999987 55555899999
Q ss_pred EEEeccCceEEE-ecccCCCCeeEEEecCCCCEEEEecCCCcee------------------eceEEEEEccCCceEEEe
Q psy7433 80 CVIDLRQRVIRS-RFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------SPVKCLAIDPHEEFFVTG 140 (213)
Q Consensus 80 ~iwd~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------~~v~~~~~~~~~~~l~~~ 140 (213)
.+||...+.... .+..|.... ...|+|++..+++++.++.++ ..+.++.|+|++..++++
T Consensus 224 ~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 302 (466)
T COG2319 224 RLWDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASG 302 (466)
T ss_pred EEEECCCCcEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCcEEEEEecCCccEEEEEECCCCCEEEEe
Confidence 999988777777 577777765 448999998888899998776 467788999988888888
Q ss_pred cCCCcEEEEEccCCeeeeeec--CCCCceeEEEecCCCeEEEEeCCC-CeEEEE-ecCCcEEEEeCCCCc
Q psy7433 141 AGDGDIKVWSLSGNHLLYNFP--GEHARSSFFKHIGQGVTQLHVDGG-SRLFSC-GADGSMKVRQLPDRD 206 (213)
Q Consensus 141 ~~dg~i~v~d~~~~~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~-~~d~~i~iw~~~~~~ 206 (213)
+.|+.+.+||.+......... .+. ..+..+.+.++ ..++.+ ..|+.+.+|++....
T Consensus 303 ~~d~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 362 (466)
T COG2319 303 SSDGTVRLWDLETGKLLSSLTLKGHE----------GPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGK 362 (466)
T ss_pred eCCCcEEEEEcCCCceEEEeeecccC----------CceEEEEECCCCCEEEEeecCCCcEEeeecCCCc
Confidence 888889999998777666655 433 45888888333 345555 678899999998765
|
|
| >KOG2110|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=6.5e-15 Score=105.40 Aligned_cols=156 Identities=17% Similarity=0.225 Sum_probs=123.0
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCc-EEEEe
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGD-ICVID 83 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-v~iwd 83 (213)
.+...+.++.+++.+.++|.-+. ...|.|.|||+ .+.+.+..+..|.+++.+++|+++|.+||+++..|+ |+++.
T Consensus 127 ~n~~gl~AlS~n~~n~ylAyp~s-~t~GdV~l~d~---~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~ 202 (391)
T KOG2110|consen 127 PNPKGLCALSPNNANCYLAYPGS-TTSGDVVLFDT---INLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFS 202 (391)
T ss_pred CCccceEeeccCCCCceEEecCC-CCCceEEEEEc---ccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEE
Confidence 45566777777778889997753 46799999999 677788888999999999999999999999999987 68999
Q ss_pred ccCceEEEecccC--CCCeeEEEecCCCCEEEEecCCCcee---------------------------------------
Q psy7433 84 LRQRVIRSRFNAH--ESPVKCLAIDPHEEFFVTGAGDGDIK--------------------------------------- 122 (213)
Q Consensus 84 ~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~~~~~~~~i~--------------------------------------- 122 (213)
+.+|+.+.+|+.. ...|.+++|+|++.+|++.+..+++.
T Consensus 203 v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~~~~~~~~~p~~~~~~~~~~sk~~~sylps~V~~ 282 (391)
T KOG2110|consen 203 VPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETVHIFKLEKVSNNPPESPTAGTSWFGKVSKAATSYLPSQVSS 282 (391)
T ss_pred cCCccEeeeeeCCceeeEEEEEEECCCCCeEEEecCCCeEEEEEecccccCCCCCCCCCCcccchhhhhhhhhcchhhhh
Confidence 9999999998753 34578999999999999999999886
Q ss_pred ---------------ece-EEEEEc--cCCceEEEecCCCcEEEEEcc--CCeeeeeecCCC
Q psy7433 123 ---------------SPV-KCLAID--PHEEFFVTGAGDGDIKVWSLS--GNHLLYNFPGEH 164 (213)
Q Consensus 123 ---------------~~v-~~~~~~--~~~~~l~~~~~dg~i~v~d~~--~~~~~~~~~~~~ 164 (213)
... ....+. +...++.+++.||.++.|.+. ++.....++.|.
T Consensus 283 ~~~~~R~FAt~~l~~s~~~~~~~l~~~~~~~~v~vas~dG~~y~y~l~~~~gGec~lik~h~ 344 (391)
T KOG2110|consen 283 VLDQSRKFATAKLPESGRKNICSLSSIQKIPRVLVASYDGHLYSYRLPPKEGGECALIKRHF 344 (391)
T ss_pred hhhhccceeEEEccCCCccceEEeeccCCCCEEEEEEcCCeEEEEEcCCCCCceeEEEEeec
Confidence 111 223333 356789999999999999874 455544454443
|
|
| >KOG2139|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=6.5e-15 Score=105.40 Aligned_cols=185 Identities=16% Similarity=0.195 Sum_probs=124.3
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEec
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDL 84 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~ 84 (213)
+| .+|++|.|++||..++++. -.+..|.|||.. ++..+.......+.++-+.||||+.+|+++.-|+..++|+.
T Consensus 194 gh-~pVtsmqwn~dgt~l~tAS--~gsssi~iWdpd---tg~~~pL~~~glgg~slLkwSPdgd~lfaAt~davfrlw~e 267 (445)
T KOG2139|consen 194 GH-NPVTSMQWNEDGTILVTAS--FGSSSIMIWDPD---TGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCDAVFRLWQE 267 (445)
T ss_pred CC-ceeeEEEEcCCCCEEeecc--cCcceEEEEcCC---CCCcccccccCCCceeeEEEcCCCCEEEEecccceeeeehh
Confidence 44 6899999999999999996 367899999984 44333333334577899999999999999999999999965
Q ss_pred cCceEEEecccCCCCeeEEEecCCCCEEEEecC-CCcee---------------------------------------ec
Q psy7433 85 RQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAG-DGDIK---------------------------------------SP 124 (213)
Q Consensus 85 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-~~~i~---------------------------------------~~ 124 (213)
....-........+.|....|+|.|+.|+..+. ...+. +.
T Consensus 268 ~q~wt~erw~lgsgrvqtacWspcGsfLLf~~sgsp~lysl~f~~~~~~~~~~~~~k~~lliaDL~e~ti~ag~~l~cge 347 (445)
T KOG2139|consen 268 NQSWTKERWILGSGRVQTACWSPCGSFLLFACSGSPRLYSLTFDGEDSVFLRPQSIKRVLLIADLQEVTICAGQRLCCGE 347 (445)
T ss_pred cccceecceeccCCceeeeeecCCCCEEEEEEcCCceEEEEeecCCCccccCcccceeeeeeccchhhhhhcCcccccCc
Confidence 443222222334558999999999987655443 33332 78
Q ss_pred eEEEEEccCCceEEEecCC--------CcEEEEEccCCeeeeeec-CCCCceeEEEecCCCeEEEEeCC---CCeEE-EE
Q psy7433 125 VKCLAIDPHEEFFVTGAGD--------GDIKVWSLSGNHLLYNFP-GEHARSSFFKHIGQGVTQLHVDG---GSRLF-SC 191 (213)
Q Consensus 125 v~~~~~~~~~~~l~~~~~d--------g~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~---~~~l~-s~ 191 (213)
+.+++|+|.|.+|++.-.. +.|..||.+..-...-.. +... +.....+.|+| ++.|+ .+
T Consensus 348 aq~lawDpsGeyLav~fKg~~~v~~~k~~i~~fdtr~sp~vels~cg~i~--------ge~P~~IsF~pl~n~g~lLsia 419 (445)
T KOG2139|consen 348 AQCLAWDPSGEYLAVIFKGQSFVLLCKLHISRFDTRKSPPVELSYCGMIG--------GEYPAYISFGPLKNEGRLLSIA 419 (445)
T ss_pred cceeeECCCCCEEEEEEcCCchhhhhhhhhhhhcccccCceEEEeccccc--------CCCCceEEeeecccCCcEEEEE
Confidence 8999999999999987543 346778876543332221 1110 12244455554 23333 34
Q ss_pred ecCCcEEEEeCC
Q psy7433 192 GADGSMKVRQLP 203 (213)
Q Consensus 192 ~~d~~i~iw~~~ 203 (213)
=..|.+.-|++.
T Consensus 420 WsTGriq~ypl~ 431 (445)
T KOG2139|consen 420 WSTGRIQRYPLT 431 (445)
T ss_pred eccCceEeeeeE
Confidence 456777766654
|
|
| >KOG0642|consensus | Back alignment and domain information |
|---|
Probab=99.69 E-value=9.1e-16 Score=114.99 Aligned_cols=161 Identities=16% Similarity=0.307 Sum_probs=128.2
Q ss_pred CccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCc-------ccccceeeeeeecCCceEEEEecCCCEEEEE
Q psy7433 1 MTYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLP-------QKKALVQAFVCHDQGASSLVFAPQHQLLISA 73 (213)
Q Consensus 1 ~~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 73 (213)
++|++|.++|.|+++.+++..+.++ +.||+|+.|++... ........+.+|.+.+..+++|+....|+++
T Consensus 338 ~tfraH~gPVl~v~v~~n~~~~ysg---g~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llsc 414 (577)
T KOG0642|consen 338 LTFRAHEGPVLCVVVPSNGEHCYSG---GIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSC 414 (577)
T ss_pred EEEecccCceEEEEecCCceEEEee---ccCceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeee
Confidence 5899999999999999999999999 58999999976311 1113445678999999999999999999999
Q ss_pred cCCCcEEEEeccCceEE--------------------------------------------Eeccc-------CCCCeeE
Q psy7433 74 GKKGDICVIDLRQRVIR--------------------------------------------SRFNA-------HESPVKC 102 (213)
Q Consensus 74 ~~d~~v~iwd~~~~~~~--------------------------------------------~~~~~-------~~~~i~~ 102 (213)
+.||++++|+.....+. ..+.. ....+..
T Consensus 415 s~DgTvr~w~~~~~~~~~f~~~~e~g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~ 494 (577)
T KOG0642|consen 415 SSDGTVRLWEPTEESPCTFGEPKEHGYPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINK 494 (577)
T ss_pred cCCceEEeeccCCcCccccCCccccCCcceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccce
Confidence 99999999987543220 00000 0123566
Q ss_pred EEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCC
Q psy7433 103 LAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEH 164 (213)
Q Consensus 103 ~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~ 164 (213)
+.++|.....+++.+|+.++ ..++++++.|+|.+|++++.|+.+++|.+....+......|.
T Consensus 495 vVs~~~~~~~~~~hed~~Ir~~dn~~~~~l~s~~a~~~svtslai~~ng~~l~s~s~d~sv~l~kld~k~~~~es~~~r 573 (577)
T KOG0642|consen 495 VVSHPTADITFTAHEDRSIRFFDNKTGKILHSMVAHKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDVKTCVLESTAHR 573 (577)
T ss_pred EEecCCCCeeEecccCCceecccccccccchheeeccceecceeecCCCceEEeecCCceeehhhccchheeecccccc
Confidence 77888888899999999887 788999999999999999999999999997777666655543
|
|
| >COG2319 FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.69 E-value=5.9e-14 Score=107.07 Aligned_cols=190 Identities=24% Similarity=0.464 Sum_probs=149.2
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeec-CCceEEEE-ecCCC-EEEEEcC-CC
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHD-QGASSLVF-APQHQ-LLISAGK-KG 77 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~-~~v~~~~~-~~~~~-~l~~~~~-d~ 77 (213)
.+..|...+.++.+.+.+..++.+ +.++.+.+|+..... ..+..+.... ..+..+.+ ++++. .++..+. |+
T Consensus 60 ~~~~~~~~i~~~~~~~~~~~~~~~---~~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 134 (466)
T COG2319 60 LLRGHEDSITSIAFSPDGELLLSG---SSDGTIKLWDLDNGE--KLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDG 134 (466)
T ss_pred eeeeccceEEEEEECCCCcEEEEe---cCCCcEEEEEcCCCc--eeEEEEeccCCCceeeEEEECCCcceEEeccCCCCc
Confidence 356789999999999999999998 689999999984221 2455555533 36777777 77777 5555444 89
Q ss_pred cEEEEeccC-ceEEEecccCCCCeeEEEecCCCCEEEEecC-CCcee-----------------eceEEEEEccCCc-eE
Q psy7433 78 DICVIDLRQ-RVIRSRFNAHESPVKCLAIDPHEEFFVTGAG-DGDIK-----------------SPVKCLAIDPHEE-FF 137 (213)
Q Consensus 78 ~v~iwd~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-~~~i~-----------------~~v~~~~~~~~~~-~l 137 (213)
.+.+||... ......+..|...+..++|+|++..++.++. ++.++ ..+.+++|+|++. ++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 214 (466)
T COG2319 135 TVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLI 214 (466)
T ss_pred cEEEEEecCCCeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEE
Confidence 999999998 7778888889999999999999998888875 77665 5799999999998 55
Q ss_pred EEecCCCcEEEEEccCCeeee-eecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCcc
Q psy7433 138 VTGAGDGDIKVWSLSGNHLLY-NFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 138 ~~~~~dg~i~v~d~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~ 207 (213)
++++.|+.|++||.+.+..+. .+..|. ... ...|++++ .+++++.|+.+++|++.....
T Consensus 215 ~~~~~d~~i~~wd~~~~~~~~~~~~~~~----------~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 275 (466)
T COG2319 215 ASGSSDGTIRLWDLSTGKLLRSTLSGHS----------DSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSS 275 (466)
T ss_pred EEecCCCcEEEEECCCCcEEeeecCCCC----------cce-eEeECCCCCEEEEecCCCcEEEeeecCCCc
Confidence 555999999999988777777 566665 232 22788865 788999999999999986654
|
|
| >KOG1272|consensus | Back alignment and domain information |
|---|
Probab=99.68 E-value=8.6e-17 Score=118.06 Aligned_cols=173 Identities=19% Similarity=0.327 Sum_probs=146.6
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCc
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR 87 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~ 87 (213)
..|.++.|-.+..+||++ ....+.||| ..+..+..++.| ..|..+.|-|..-+|++++..|.++.-|+.+|
T Consensus 171 Etv~Dv~~LHneq~~AVA----QK~y~yvYD----~~GtElHClk~~-~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~G 241 (545)
T KOG1272|consen 171 ETVRDVTFLHNEQFFAVA----QKKYVYVYD----NNGTELHCLKRH-IRVARLEFLPYHFLLVAASEAGFLKYQDVSTG 241 (545)
T ss_pred hhhhhhhhhcchHHHHhh----hhceEEEec----CCCcEEeehhhc-CchhhhcccchhheeeecccCCceEEEeechh
Confidence 467888888888899988 789999999 456555555544 56899999999989999999999999999999
Q ss_pred eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCCCcEEEEE
Q psy7433 88 VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWS 150 (213)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d 150 (213)
+.+..+....+.+..+.-+|-+..+-+|..+|++. ++|.+++++++|+|+++.+.|..++|||
T Consensus 242 klVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~skePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWD 321 (545)
T KOG1272|consen 242 KLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSKEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWD 321 (545)
T ss_pred hhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCCCCcchHHHHHhcCCCcceEEECCCCcEEeecccccceeEee
Confidence 99999988889999999999999999999999886 8999999999999999999999999999
Q ss_pred ccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEe
Q psy7433 151 LSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQ 201 (213)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~ 201 (213)
+|....+.++... .+...++++.-+.|| .+....|.||.
T Consensus 322 lR~~~ql~t~~tp-----------~~a~~ls~SqkglLA-~~~G~~v~iw~ 360 (545)
T KOG1272|consen 322 LRNFYQLHTYRTP-----------HPASNLSLSQKGLLA-LSYGDHVQIWK 360 (545)
T ss_pred eccccccceeecC-----------CCcccccccccccee-eecCCeeeeeh
Confidence 9988766666553 357778888655554 44556789994
|
|
| >KOG2394|consensus | Back alignment and domain information |
|---|
Probab=99.67 E-value=5.2e-16 Score=115.89 Aligned_cols=95 Identities=20% Similarity=0.335 Sum_probs=86.5
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccC
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQ 86 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~ 86 (213)
.+.|..++|+|||++||+. +.||.++|+|. .+.+.+...+..-+...|++|||||++|++|+.|-.|.+|.+..
T Consensus 290 ~g~in~f~FS~DG~~LA~V---SqDGfLRvF~f---dt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~e 363 (636)
T KOG2394|consen 290 EGSINEFAFSPDGKYLATV---SQDGFLRIFDF---DTQELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEE 363 (636)
T ss_pred cccccceeEcCCCceEEEE---ecCceEEEeec---cHHHHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEEecc
Confidence 3578999999999999999 79999999999 56666666666678899999999999999999999999999999
Q ss_pred ceEEEecccCCCCeeEEEecC
Q psy7433 87 RVIRSRFNAHESPVKCLAIDP 107 (213)
Q Consensus 87 ~~~~~~~~~~~~~i~~~~~~~ 107 (213)
.+.+..-++|...|..++|.|
T Consensus 364 rRVVARGqGHkSWVs~VaFDp 384 (636)
T KOG2394|consen 364 RRVVARGQGHKSWVSVVAFDP 384 (636)
T ss_pred ceEEEeccccccceeeEeecc
Confidence 999999999999999999997
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=5.1e-14 Score=105.23 Aligned_cols=185 Identities=13% Similarity=0.133 Sum_probs=121.5
Q ss_pred ceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcc-cccceeeeeeecCCceEEEEecCCCEEEEE-cCCCcEEEEeccC
Q psy7433 9 ITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQ-KKALVQAFVCHDQGASSLVFAPQHQLLISA-GKKGDICVIDLRQ 86 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~v~iwd~~~ 86 (213)
....+.|+|++++++++.+ .++.|.+|+++... ....+..+. +......++++|++++++++ ..++.|.+||+.+
T Consensus 81 ~p~~i~~~~~g~~l~v~~~--~~~~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~ 157 (330)
T PRK11028 81 SPTHISTDHQGRFLFSASY--NANCVSVSPLDKDGIPVAPIQIIE-GLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSD 157 (330)
T ss_pred CceEEEECCCCCEEEEEEc--CCCeEEEEEECCCCCCCCceeecc-CCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECC
Confidence 4567999999999998853 58999999985211 112222222 23446788999999888654 4568999999976
Q ss_pred ceEEE-------ecccCCCCeeEEEecCCCCEEEEecC-CCcee--------------e-------------ceEEEEEc
Q psy7433 87 RVIRS-------RFNAHESPVKCLAIDPHEEFFVTGAG-DGDIK--------------S-------------PVKCLAID 131 (213)
Q Consensus 87 ~~~~~-------~~~~~~~~i~~~~~~~~~~~l~~~~~-~~~i~--------------~-------------~v~~~~~~ 131 (213)
...+. ... .......++|+|++++++++.+ ++.+. . ....+.++
T Consensus 158 ~g~l~~~~~~~~~~~-~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~ 236 (330)
T PRK11028 158 DGHLVAQEPAEVTTV-EGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHIT 236 (330)
T ss_pred CCcccccCCCceecC-CCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEEC
Confidence 43221 111 2344678999999999888766 55543 0 01247799
Q ss_pred cCCceEEEecC-CCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEe-cCCcEEEEeCCC
Q psy7433 132 PHEEFFVTGAG-DGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCG-ADGSMKVRQLPD 204 (213)
Q Consensus 132 ~~~~~l~~~~~-dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~-~d~~i~iw~~~~ 204 (213)
|++++++++.. ++.|.+|++........+..+... +.....+.++|++ +|+++. .++.|.+|++..
T Consensus 237 pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~-------~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~~ 305 (330)
T PRK11028 237 PDGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPT-------ETQPRGFNIDHSGKYLIAAGQKSHHISVYEIDG 305 (330)
T ss_pred CCCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEec-------cccCCceEECCCCCEEEEEEccCCcEEEEEEcC
Confidence 99998888854 689999999643221122221100 1245578999876 465555 489999998853
|
|
| >KOG1272|consensus | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.1e-16 Score=115.19 Aligned_cols=179 Identities=16% Similarity=0.213 Sum_probs=150.7
Q ss_pred eEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceE
Q psy7433 10 TSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVI 89 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~ 89 (213)
.+.+.++.+|+.++.+ ...|.|-.+|+ .+.+....+. -...|.++.|..+.+++|++ ....+++||- .|..
T Consensus 132 PY~~~ytrnGrhlllg---GrKGHlAa~Dw---~t~~L~~Ei~-v~Etv~Dv~~LHneq~~AVA-QK~y~yvYD~-~GtE 202 (545)
T KOG1272|consen 132 PYHLDYTRNGRHLLLG---GRKGHLAAFDW---VTKKLHFEIN-VMETVRDVTFLHNEQFFAVA-QKKYVYVYDN-NGTE 202 (545)
T ss_pred CeeeeecCCccEEEec---CCccceeeeec---ccceeeeeee-hhhhhhhhhhhcchHHHHhh-hhceEEEecC-CCcE
Confidence 4678889999999999 48999999999 5555555544 34668999999888877776 6679999995 4666
Q ss_pred EEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCCCcEEEEEcc
Q psy7433 90 RSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLS 152 (213)
Q Consensus 90 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~ 152 (213)
++.++. ...+..+.|.|-.-.|++++..|.++ +.+..|+-+|-+..+-+|..+|+|.+|...
T Consensus 203 lHClk~-~~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~ 281 (545)
T KOG1272|consen 203 LHCLKR-HIRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPN 281 (545)
T ss_pred Eeehhh-cCchhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCCC
Confidence 677764 46688999999888899999999876 778889999999999999999999999999
Q ss_pred CCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCccc
Q psy7433 153 GNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
..+++..+..|. ++|.++++.+++ +++|.+.|..++|||+++-.++
T Consensus 282 skePLvKiLcH~----------g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql 328 (545)
T KOG1272|consen 282 SKEPLVKILCHR----------GPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQL 328 (545)
T ss_pred CcchHHHHHhcC----------CCcceEEECCCCcEEeecccccceeEeeecccccc
Confidence 999999999987 899999999965 5999999999999999986543
|
|
| >KOG3881|consensus | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.7e-14 Score=103.95 Aligned_cols=188 Identities=16% Similarity=0.245 Sum_probs=138.5
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCccc-ccceeeeeeecCCceEEEEecCC-CEEEEEcCC--CcEEEEe
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQK-KALVQAFVCHDQGASSLVFAPQH-QLLISAGKK--GDICVID 83 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d--~~v~iwd 83 (213)
++|..+... ++ .|++| -.+|.+.+|..+.+.. ...+..+.. ..++..+.-++.. .++++|+.. ..+.+||
T Consensus 106 ~~I~gl~~~-dg-~Litc---~~sG~l~~~~~k~~d~hss~l~~la~-g~g~~~~r~~~~~p~Iva~GGke~~n~lkiwd 179 (412)
T KOG3881|consen 106 KSIKGLKLA-DG-TLITC---VSSGNLQVRHDKSGDLHSSKLIKLAT-GPGLYDVRQTDTDPYIVATGGKENINELKIWD 179 (412)
T ss_pred ccccchhhc-CC-EEEEE---ecCCcEEEEeccCCccccccceeeec-CCceeeeccCCCCCceEecCchhcccceeeee
Confidence 344444332 33 45555 4799999999853321 122233332 3556777777754 455668888 8899999
Q ss_pred ccCceEEEecccC---------CCCeeEEEecCC--CCEEEEecCCCcee------------------eceEEEEEccCC
Q psy7433 84 LRQRVIRSRFNAH---------ESPVKCLAIDPH--EEFFVTGAGDGDIK------------------SPVKCLAIDPHE 134 (213)
Q Consensus 84 ~~~~~~~~~~~~~---------~~~i~~~~~~~~--~~~l~~~~~~~~i~------------------~~v~~~~~~~~~ 134 (213)
+++.+.+..-+.. +-.++.+.|.|. ...|++++.-++++ .+++++...|++
T Consensus 180 le~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~g 259 (412)
T KOG3881|consen 180 LEQSKQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSG 259 (412)
T ss_pred cccceeeeeccCCCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccCcceeEeccccCcceeeeecCCC
Confidence 9988655443321 224568889887 78999999999887 788999999999
Q ss_pred ceEEEecCCCcEEEEEccCCeeeee-ecCCCCceeEEEecCCCeEEEEeCCC-CeEEEEecCCcEEEEeCCCCccccccC
Q psy7433 135 EFFVTGAGDGDIKVWSLSGNHLLYN-FPGEHARSSFFKHIGQGVTQLHVDGG-SRLFSCGADGSMKVRQLPDRDAVVHTL 212 (213)
Q Consensus 135 ~~l~~~~~dg~i~v~d~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~d~~i~iw~~~~~~~~~~~l 212 (213)
+++++|..-|.+..||++.++.... +.+.. +.|.++..+|. ..+++++-|..+||+|+.+. ++++..
T Consensus 260 n~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~t----------Gsirsih~hp~~~~las~GLDRyvRIhD~ktr-kll~kv 328 (412)
T KOG3881|consen 260 NFIYTGNTKGQLAKFDLRGGKLLGCGLKGIT----------GSIRSIHCHPTHPVLASCGLDRYVRIHDIKTR-KLLHKV 328 (412)
T ss_pred cEEEEecccchhheecccCceeeccccCCcc----------CCcceEEEcCCCceEEeeccceeEEEeecccc-hhhhhh
Confidence 9999999999999999999988776 65554 78999999997 56999999999999999985 444443
|
|
| >KOG2111|consensus | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.2e-13 Score=97.35 Aligned_cols=189 Identities=15% Similarity=0.268 Sum_probs=129.0
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec--CCCEEE-EEcCCCcEEEEe
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP--QHQLLI-SAGKKGDICVID 83 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~-~~~~d~~v~iwd 83 (213)
..+|.++.+.++ .|++. ..+.|.||... ...+.++.+....++=--++..| +..+|+ -|-.-|.|++-|
T Consensus 94 ~~~I~~V~l~r~--riVvv----l~~~I~VytF~--~n~k~l~~~et~~NPkGlC~~~~~~~k~~LafPg~k~GqvQi~d 165 (346)
T KOG2111|consen 94 NSEIKAVKLRRD--RIVVV----LENKIYVYTFP--DNPKLLHVIETRSNPKGLCSLCPTSNKSLLAFPGFKTGQVQIVD 165 (346)
T ss_pred ccceeeEEEcCC--eEEEE----ecCeEEEEEcC--CChhheeeeecccCCCceEeecCCCCceEEEcCCCccceEEEEE
Confidence 456777777654 56665 58999999984 24445554443332222344445 333444 345679999999
Q ss_pred ccCceE--EEecccCCCCeeEEEecCCCCEEEEecCCCcee--------------------eceEEEEEccCCceEEEec
Q psy7433 84 LRQRVI--RSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK--------------------SPVKCLAIDPHEEFFVTGA 141 (213)
Q Consensus 84 ~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~--------------------~~v~~~~~~~~~~~l~~~~ 141 (213)
+...+. ...+.+|...|.|++++-+|..+|+++..|++. ..|.+|+|||+..+|+++|
T Consensus 166 L~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsS 245 (346)
T KOG2111|consen 166 LASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLAVSS 245 (346)
T ss_pred hhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEEEEEc
Confidence 987654 467789999999999999999999999999875 8899999999999999999
Q ss_pred CCCcEEEEEccCCeeeee--------------ecCCCCceeEEEecCCCeEEEEeCCC-CeEEEEecCCcEEEEeCC
Q psy7433 142 GDGDIKVWSLSGNHLLYN--------------FPGEHARSSFFKHIGQGVTQLHVDGG-SRLFSCGADGSMKVRQLP 203 (213)
Q Consensus 142 ~dg~i~v~d~~~~~~~~~--------------~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~d~~i~iw~~~ 203 (213)
..|+++||.++....-.. +.........+.-..+...-++|..+ +.++..+.||..+=+.+.
T Consensus 246 dKgTlHiF~l~~~~~~~~~~SSl~~~~~~lpky~~S~wS~~~f~l~~~~~~~~~fg~~~nsvi~i~~Dgsy~k~~f~ 322 (346)
T KOG2111|consen 246 DKGTLHIFSLRDTENTEDESSSLSFKRLVLPKYFSSEWSFAKFQLPQGTQCIIAFGSETNTVIAICADGSYYKFKFD 322 (346)
T ss_pred CCCeEEEEEeecCCCCccccccccccccccchhcccceeEEEEEccCCCcEEEEecCCCCeEEEEEeCCcEEEEEec
Confidence 999999999974321111 11111111222333455666777655 667778888876654443
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=6.9e-14 Score=107.75 Aligned_cols=184 Identities=13% Similarity=0.090 Sum_probs=120.3
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEE-cCCC--cEEE
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISA-GKKG--DICV 81 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~--~v~i 81 (213)
.+...+.+.+|+|||+.|+.......+..|.+|++... ..+.+.. ....+....|+|+|+.|+.. +.+| .|.+
T Consensus 196 ~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G-~~~~l~~---~~~~~~~~~~SPDG~~La~~~~~~g~~~I~~ 271 (429)
T PRK03629 196 RSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANG-AVRQVAS---FPRHNGAPAFSPDGSKLAFALSKTGSLNLYV 271 (429)
T ss_pred cCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCC-CeEEccC---CCCCcCCeEECCCCCEEEEEEcCCCCcEEEE
Confidence 34567889999999999987632123567999998432 1122222 23345578999999988754 4444 5889
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCC-c--ee----------------eceEEEEEccCCceEEEecC
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDG-D--IK----------------SPVKCLAIDPHEEFFVTGAG 142 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~-~--i~----------------~~v~~~~~~~~~~~l~~~~~ 142 (213)
||+.+++..+. ......+....|+|+++.|+..+.++ . +. .......|+|+|++++..+.
T Consensus 272 ~d~~tg~~~~l-t~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~~lt~~~~~~~~~~~SpDG~~Ia~~~~ 350 (429)
T PRK03629 272 MDLASGQIRQV-TDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSS 350 (429)
T ss_pred EECCCCCEEEc-cCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeEEeecCCCCccCEEECCCCCEEEEEEc
Confidence 99988765543 33445678899999999887766542 2 21 23456889999998877654
Q ss_pred C---CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEecCCc---EEEEeCCCC
Q psy7433 143 D---GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGADGS---MKVRQLPDR 205 (213)
Q Consensus 143 d---g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~d~~---i~iw~~~~~ 205 (213)
+ ..|.+||+.+++.. .+... .......|+|++. |+..+.++. +.++++...
T Consensus 351 ~~g~~~I~~~dl~~g~~~-~Lt~~-----------~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~~G~ 408 (429)
T PRK03629 351 NGGQQHIAKQDLATGGVQ-VLTDT-----------FLDETPSIAPNGTMVIYSSSQGMGSVLNLVSTDGR 408 (429)
T ss_pred cCCCceEEEEECCCCCeE-EeCCC-----------CCCCCceECCCCCEEEEEEcCCCceEEEEEECCCC
Confidence 3 35888898776533 23221 1233567999775 666666653 677777543
|
|
| >KOG2445|consensus | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.3e-14 Score=101.70 Aligned_cols=154 Identities=11% Similarity=0.116 Sum_probs=117.4
Q ss_pred eecCCceEEEEecCCCEEEEEcCCCcEEEEeccCc----eEEEecccCCCCeeEEEecC--CCCEEEEecCCCcee----
Q psy7433 53 CHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR----VIRSRFNAHESPVKCLAIDP--HEEFFVTGAGDGDIK---- 122 (213)
Q Consensus 53 ~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~----~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~~~~i~---- 122 (213)
+|..-|.++.|.+.|+++++|+.|+.++|||.+.. .+....+.|.+.|..+.|.+ -|+.+++++.|+++.
T Consensus 11 ~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE 90 (361)
T KOG2445|consen 11 GHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEE 90 (361)
T ss_pred CCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeeee
Confidence 57788999999999999999999999999997543 56667788999999999965 588999999999886
Q ss_pred ----------------------eceEEEEEccC--CceEEEecCCCcEEEEEccCCeeeeeecCCCCcee---EEEecCC
Q psy7433 123 ----------------------SPVKCLAIDPH--EEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSS---FFKHIGQ 175 (213)
Q Consensus 123 ----------------------~~v~~~~~~~~--~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~---~~~~~~~ 175 (213)
..|+.+.|.|. |-.|++++.||.++||+.-....+..+...++... ....+..
T Consensus 91 ~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~ 170 (361)
T KOG2445|consen 91 QEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNKQ 170 (361)
T ss_pred cccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCcccccC
Confidence 78999999996 55899999999999999865544433332221110 0111236
Q ss_pred CeEEEEeCCCC----eEEEEecC-----CcEEEEeCCCCc
Q psy7433 176 GVTQLHVDGGS----RLFSCGAD-----GSMKVRQLPDRD 206 (213)
Q Consensus 176 ~v~~~~~~~~~----~l~s~~~d-----~~i~iw~~~~~~ 206 (213)
+..|+.|+|.. .|+.|+.+ +.++||...+..
T Consensus 171 ~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~ 210 (361)
T KOG2445|consen 171 PCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENG 210 (361)
T ss_pred cceEEeeccccccCceEEEEcccCCccccceEEEEecCCc
Confidence 78899999842 36666554 489999887654
|
|
| >KOG1310|consensus | Back alignment and domain information |
|---|
Probab=99.65 E-value=5e-16 Score=116.51 Aligned_cols=157 Identities=18% Similarity=0.223 Sum_probs=121.5
Q ss_pred ceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEec-ccCCCCeeEEEecC--CCCEEEEecCCCcee-
Q psy7433 47 LVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRF-NAHESPVKCLAIDP--HEEFFVTGAGDGDIK- 122 (213)
Q Consensus 47 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~-~~~~~~i~~~~~~~--~~~~l~~~~~~~~i~- 122 (213)
....+.+|.+-|++++|+.+|.+|++|++|-.+.|||.-..+++..+ .+|...|.++.|-| .++.+++|..|..|+
T Consensus 42 lE~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~l 121 (758)
T KOG1310|consen 42 LEAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKL 121 (758)
T ss_pred hhhhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEE
Confidence 34557899999999999999999999999999999999888877776 46889999999999 456889999999887
Q ss_pred --------------------------eceEEEEEccCC-ceEEEecCCCcEEEEEccCCeeeeeec-CCCCceeEEEecC
Q psy7433 123 --------------------------SPVKCLAIDPHE-EFFVTGAGDGDIKVWSLSGNHLLYNFP-GEHARSSFFKHIG 174 (213)
Q Consensus 123 --------------------------~~v~~~~~~~~~-~~l~~~~~dg~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~ 174 (213)
..|..++-.|++ ..+.++++||+|+-+|+|.......-. .+.... .....-
T Consensus 122 fdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~-ny~~~l 200 (758)
T KOG1310|consen 122 FDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILV-NYNPQL 200 (758)
T ss_pred EecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHH-Hhchhh
Confidence 567778888888 589999999999999998754322211 111000 000001
Q ss_pred CCeEEEEeCCC--CeEEEEecCCcEEEEeCCC
Q psy7433 175 QGVTQLHVDGG--SRLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 175 ~~v~~~~~~~~--~~l~s~~~d~~i~iw~~~~ 204 (213)
-...++.++|. .+|+.|+.|-..++||.+.
T Consensus 201 ielk~ltisp~rp~~laVGgsdpfarLYD~Rr 232 (758)
T KOG1310|consen 201 IELKCLTISPSRPYYLAVGGSDPFARLYDRRR 232 (758)
T ss_pred heeeeeeecCCCCceEEecCCCchhhhhhhhh
Confidence 35678888883 4699999999999999643
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.1e-13 Score=106.99 Aligned_cols=186 Identities=13% Similarity=0.080 Sum_probs=122.5
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEE-EEcCCCc--E
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLI-SAGKKGD--I 79 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~--v 79 (213)
+..|.+.+.+.+|+|||+.|+.......+..|.+||+.. +.. ..+..+.+.+....|+|+|+.|+ +.+.++. |
T Consensus 197 lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~---g~~-~~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~I 272 (435)
T PRK05137 197 LTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLET---GQR-ELVGNFPGMTFAPRFSPDGRKVVMSLSQGGNTDI 272 (435)
T ss_pred EecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCC---CcE-EEeecCCCcccCcEECCCCCEEEEEEecCCCceE
Confidence 445677899999999999988874322357899999843 222 23444556677899999998775 5555554 7
Q ss_pred EEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecC-CC--cee----------------eceEEEEEccCCceEEEe
Q psy7433 80 CVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAG-DG--DIK----------------SPVKCLAIDPHEEFFVTG 140 (213)
Q Consensus 80 ~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-~~--~i~----------------~~v~~~~~~~~~~~l~~~ 140 (213)
.+||+.+++.. .+..+........|+|+++.++..+. ++ .+. ..+....|+|+|++|+..
T Consensus 273 y~~d~~~~~~~-~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~~lt~~~~~~~~~~~SpdG~~ia~~ 351 (435)
T PRK05137 273 YTMDLRSGTTT-RLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPRRISFGGGRYSTPVWSPRGDLIAFT 351 (435)
T ss_pred EEEECCCCceE-EccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeEEeecCCCcccCeEECCCCCEEEEE
Confidence 77788877653 45545556678999999998887664 22 222 234557899999988776
Q ss_pred cCC---CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEec-C-----CcEEEEeCCCC
Q psy7433 141 AGD---GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGA-D-----GSMKVRQLPDR 205 (213)
Q Consensus 141 ~~d---g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~-d-----~~i~iw~~~~~ 205 (213)
+.+ ..|.+||+..+.. ..+... ..+....|+|++. |+..+. . ..+.++|+..+
T Consensus 352 ~~~~~~~~i~~~d~~~~~~-~~lt~~-----------~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~ 414 (435)
T PRK05137 352 KQGGGQFSIGVMKPDGSGE-RILTSG-----------FLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLTGR 414 (435)
T ss_pred EcCCCceEEEEEECCCCce-EeccCC-----------CCCCCCeECCCCCEEEEEEccCCCCCcceEEEEECCCC
Confidence 543 3577888754432 222211 2356788999764 443332 2 25777787654
|
|
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=6.6e-14 Score=107.88 Aligned_cols=183 Identities=11% Similarity=0.078 Sum_probs=116.7
Q ss_pred ccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEE-EEcCCCcEEEE
Q psy7433 4 QCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLI-SAGKKGDICVI 82 (213)
Q Consensus 4 ~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~v~iw 82 (213)
..+.+.+.+.+|+|+|+.|+..........|.+||+. .++. ..+....+......|+|+|+.|+ +.+.++...+|
T Consensus 192 ~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~---~g~~-~~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy 267 (427)
T PRK02889 192 LSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLA---TGRR-RVVANFKGSNSAPAWSPDGRTLAVALSRDGNSQIY 267 (427)
T ss_pred ccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECC---CCCE-EEeecCCCCccceEECCCCCEEEEEEccCCCceEE
Confidence 3566788999999999999887421223569999984 3322 22333345567899999998876 56777776666
Q ss_pred ec--cCceEEEecccCCCCeeEEEecCCCCEEEEecCC-Cc--ee----------------eceEEEEEccCCceEEEec
Q psy7433 83 DL--RQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGD-GD--IK----------------SPVKCLAIDPHEEFFVTGA 141 (213)
Q Consensus 83 d~--~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~-~~--i~----------------~~v~~~~~~~~~~~l~~~~ 141 (213)
.+ .++. ...+..+........|+||++.++..+.. +. +. .......|+|+|++++..+
T Consensus 268 ~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~lt~~g~~~~~~~~SpDG~~Ia~~s 346 (427)
T PRK02889 268 TVNADGSG-LRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQRVTFTGSYNTSPRISPDGKLLAYIS 346 (427)
T ss_pred EEECCCCC-cEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEEEecCCCCcCceEECCCCCEEEEEE
Confidence 54 4443 44555455556778999999988766543 22 21 1123578999999988776
Q ss_pred CCC---cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEe-cCCc--EEEEeCC
Q psy7433 142 GDG---DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCG-ADGS--MKVRQLP 203 (213)
Q Consensus 142 ~dg---~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~-~d~~--i~iw~~~ 203 (213)
.++ .|.+||+.+++... +... .......|+|++. |+..+ ..|. +.+.++.
T Consensus 347 ~~~g~~~I~v~d~~~g~~~~-lt~~-----------~~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~~ 403 (427)
T PRK02889 347 RVGGAFKLYVQDLATGQVTA-LTDT-----------TRDESPSFAPNGRYILYATQQGGRSVLAAVSSD 403 (427)
T ss_pred ccCCcEEEEEEECCCCCeEE-ccCC-----------CCccCceECCCCCEEEEEEecCCCEEEEEEECC
Confidence 554 69999998765433 2221 1235678999764 44444 3333 4444553
|
|
| >KOG1240|consensus | Back alignment and domain information |
|---|
Probab=99.64 E-value=7.7e-14 Score=113.31 Aligned_cols=193 Identities=12% Similarity=0.169 Sum_probs=138.8
Q ss_pred ccccccCceEEEEEeCCC-CeEEEeeccCCCccEEEEeCCCcccc----cceeeeeeecCCceEEEEecCCCEEEEEcCC
Q psy7433 2 TYQCHNKITSDFVFLGSC-SLVATAGHSSESKNVCLWDSLLPQKK----ALVQAFVCHDQGASSLVFAPQHQLLISAGKK 76 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~-~~l~~~g~~s~~~~i~iwd~~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 76 (213)
.|..|...|..++.++.. .+|+++ +.||+|++|+.+..... +...++......+.++...+.++.+|.++.|
T Consensus 1043 hL~Ehs~~v~k~a~s~~~~s~Fvsg---S~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t~D 1119 (1431)
T KOG1240|consen 1043 HLHEHSSAVIKLAVSSEHTSLFVSG---SDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVSTKD 1119 (1431)
T ss_pred hhhhccccccceeecCCCCceEEEe---cCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEEcCC
Confidence 577899999999988755 999999 89999999998532211 2223333346778899999999999999999
Q ss_pred CcEEEEeccCc--e-----EEEecccC-CCC-eeEEEecC-CCC-EEEEecCCCcee-------------------eceE
Q psy7433 77 GDICVIDLRQR--V-----IRSRFNAH-ESP-VKCLAIDP-HEE-FFVTGAGDGDIK-------------------SPVK 126 (213)
Q Consensus 77 ~~v~iwd~~~~--~-----~~~~~~~~-~~~-i~~~~~~~-~~~-~l~~~~~~~~i~-------------------~~v~ 126 (213)
|.|.+.+++.. + ..+....+ .+. +...++.. ... .++.+...+.+. +.|+
T Consensus 1120 G~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG~vT 1199 (1431)
T KOG1240|consen 1120 GSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRHGLVT 1199 (1431)
T ss_pred CeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCcccccee
Confidence 99999998762 1 11111111 222 33333433 222 455555555443 8899
Q ss_pred EEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCC--C--CeE-EEEe-cCCcEEEE
Q psy7433 127 CLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG--G--SRL-FSCG-ADGSMKVR 200 (213)
Q Consensus 127 ~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~--~~l-~s~~-~d~~i~iw 200 (213)
+++.+|.+.+++.|+..|.+.+||+|-+.++..+..+.. .++..+..+| . ... .+++ ..+.|.+|
T Consensus 1200 Si~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~---------~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~w 1270 (1431)
T KOG1240|consen 1200 SIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPAR---------APIRHVWLCPTYPQESVSVSAGSSSNNEVSTW 1270 (1431)
T ss_pred EEEecCCceEEEEecCCceEEEEEeecCceeecccCccc---------CCcceEEeeccCCCCceEEEecccCCCceeee
Confidence 999999999999999999999999999999888876543 5788888776 2 334 4444 57799999
Q ss_pred eCCCCc
Q psy7433 201 QLPDRD 206 (213)
Q Consensus 201 ~~~~~~ 206 (213)
++.++.
T Consensus 1271 n~~~g~ 1276 (1431)
T KOG1240|consen 1271 NMETGL 1276 (1431)
T ss_pred ecccCc
Confidence 998874
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=4.5e-13 Score=100.20 Aligned_cols=191 Identities=12% Similarity=0.145 Sum_probs=124.7
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcC-CCcEEEEecc
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGK-KGDICVIDLR 85 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~v~iwd~~ 85 (213)
.+....++++|++++|++++ ..++.|.+|+++.......+.... .......++|+|++++|++++. ++.|.+|++.
T Consensus 34 ~~~~~~l~~spd~~~lyv~~--~~~~~i~~~~~~~~g~l~~~~~~~-~~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~ 110 (330)
T PRK11028 34 PGQVQPMVISPDKRHLYVGV--RPEFRVLSYRIADDGALTFAAESP-LPGSPTHISTDHQGRFLFSASYNANCVSVSPLD 110 (330)
T ss_pred CCCCccEEECCCCCEEEEEE--CCCCcEEEEEECCCCceEEeeeec-CCCCceEEEECCCCCEEEEEEcCCCeEEEEEEC
Confidence 34577789999999987764 367899999985211122222222 2335678999999998888764 7899999996
Q ss_pred Cc----eEEEecccCCCCeeEEEecCCCCEEEEecC-CCcee-----------------------eceEEEEEccCCceE
Q psy7433 86 QR----VIRSRFNAHESPVKCLAIDPHEEFFVTGAG-DGDIK-----------------------SPVKCLAIDPHEEFF 137 (213)
Q Consensus 86 ~~----~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-~~~i~-----------------------~~v~~~~~~~~~~~l 137 (213)
+. +.+..+. .......++++|+++++++++. ++.+. ..+..+.|+|+++++
T Consensus 111 ~~g~~~~~~~~~~-~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~l 189 (330)
T PRK11028 111 KDGIPVAPIQIIE-GLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQYA 189 (330)
T ss_pred CCCCCCCceeecc-CCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecCCCCCCceEEECCCCCEE
Confidence 42 2222222 2345678899999988866554 34443 123578999999998
Q ss_pred EEecC-CCcEEEEEccC--C--eeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEe-cCCcEEEEeCCCC
Q psy7433 138 VTGAG-DGDIKVWSLSG--N--HLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCG-ADGSMKVRQLPDR 205 (213)
Q Consensus 138 ~~~~~-dg~i~v~d~~~--~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~-~d~~i~iw~~~~~ 205 (213)
++++. ++.|.+||+.. + +.+..+...... .. .......+.++|+++ ++++. .++.|.+|++...
T Consensus 190 yv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~---~~-~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~ 260 (330)
T PRK11028 190 YCVNELNSSVDVWQLKDPHGEIECVQTLDMMPAD---FS-DTRWAADIHITPDGRHLYACDRTASLISVFSVSED 260 (330)
T ss_pred EEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCc---CC-CCccceeEEECCCCCEEEEecCCCCeEEEEEEeCC
Confidence 88876 89999999973 2 233333221100 00 012234688899764 55554 4789999999654
|
|
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.1e-13 Score=106.97 Aligned_cols=186 Identities=13% Similarity=0.112 Sum_probs=120.7
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEE-EEcCCC--cE
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLI-SAGKKG--DI 79 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~--~v 79 (213)
+..|...+.+.+|+|+|+.|+.......+..|.+||+.. ++. ..+....+......|+|+|+.|+ +.+.++ .|
T Consensus 199 lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~---g~~-~~l~~~~g~~~~~~~SpDG~~l~~~~s~~g~~~I 274 (433)
T PRK04922 199 ILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLAT---GQR-ELVASFRGINGAPSFSPDGRRLALTLSRDGNPEI 274 (433)
T ss_pred eecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCC---CCE-EEeccCCCCccCceECCCCCEEEEEEeCCCCceE
Confidence 344566788999999999999874322345799999843 222 22223344456789999998775 444444 59
Q ss_pred EEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecC-CCc--ee----------------eceEEEEEccCCceEEEe
Q psy7433 80 CVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAG-DGD--IK----------------SPVKCLAIDPHEEFFVTG 140 (213)
Q Consensus 80 ~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-~~~--i~----------------~~v~~~~~~~~~~~l~~~ 140 (213)
++||+.+++.. .+..+.......+|+|+++.++..+. ++. +. ......+|+|+|++++..
T Consensus 275 y~~d~~~g~~~-~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~lt~~g~~~~~~~~SpDG~~Ia~~ 353 (433)
T PRK04922 275 YVMDLGSRQLT-RLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAERLTFQGNYNARASVSPDGKKIAMV 353 (433)
T ss_pred EEEECCCCCeE-ECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEEeecCCCCccCEEECCCCCEEEEE
Confidence 99999887654 44445455567899999998887664 322 22 123467999999988876
Q ss_pred cCCC---cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEec---CCcEEEEeCCCC
Q psy7433 141 AGDG---DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGA---DGSMKVRQLPDR 205 (213)
Q Consensus 141 ~~dg---~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~---d~~i~iw~~~~~ 205 (213)
+.++ .|.+||+.+++.. .+... .......|+|++. ++..+. .+.+.++++...
T Consensus 354 ~~~~~~~~I~v~d~~~g~~~-~Lt~~-----------~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~g~ 413 (433)
T PRK04922 354 HGSGGQYRIAVMDLSTGSVR-TLTPG-----------SLDESPSFAPNGSMVLYATREGGRGVLAAVSTDGR 413 (433)
T ss_pred ECCCCceeEEEEECCCCCeE-ECCCC-----------CCCCCceECCCCCEEEEEEecCCceEEEEEECCCC
Confidence 5433 6899999776654 33221 1234568999765 444443 235777777543
|
|
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=99.63 E-value=5.8e-14 Score=96.52 Aligned_cols=125 Identities=25% Similarity=0.400 Sum_probs=89.4
Q ss_pred cCceEEEEEeCCCCeEEEe-eccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcC---CCcEEEE
Q psy7433 7 NKITSDFVFLGSCSLVATA-GHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGK---KGDICVI 82 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~-g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~v~iw 82 (213)
.++|.+++|+|+|+.||+. | ..+..|.+||++ .+.+..+ +...++.+.|+|+|++|+.++. .|.+.+|
T Consensus 59 ~~~I~~~~WsP~g~~favi~g--~~~~~v~lyd~~----~~~i~~~--~~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~w 130 (194)
T PF08662_consen 59 EGPIHDVAWSPNGNEFAVIYG--SMPAKVTLYDVK----GKKIFSF--GTQPRNTISWSPDGRFLVLAGFGNLNGDLEFW 130 (194)
T ss_pred CCceEEEEECcCCCEEEEEEc--cCCcccEEEcCc----ccEeEee--cCCCceEEEECCCCCEEEEEEccCCCcEEEEE
Confidence 4579999999999987655 3 456799999982 5555555 3567889999999999998864 4679999
Q ss_pred eccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCceeeceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeec
Q psy7433 83 DLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFP 161 (213)
Q Consensus 83 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~ 161 (213)
|+++.+.+.... + ..++.++|+|+|++|+++.... --..|+.++||++. |+.+....
T Consensus 131 d~~~~~~i~~~~-~-~~~t~~~WsPdGr~~~ta~t~~-------------------r~~~dng~~Iw~~~-G~~l~~~~ 187 (194)
T PF08662_consen 131 DVRKKKKISTFE-H-SDATDVEWSPDGRYLATATTSP-------------------RLRVDNGFKIWSFQ-GRLLYKKP 187 (194)
T ss_pred ECCCCEEeeccc-c-CcEEEEEEcCCCCEEEEEEecc-------------------ceeccccEEEEEec-CeEeEecc
Confidence 999888877664 2 3466777777777766643211 01246788999974 55555443
|
|
| >KOG1587|consensus | Back alignment and domain information |
|---|
Probab=99.62 E-value=8.2e-14 Score=108.19 Aligned_cols=188 Identities=21% Similarity=0.308 Sum_probs=134.3
Q ss_pred cccCceEEEEEeCCCCe--EEEeeccCCCccEEEEeCCCcccc---cceeeee------eecCCceEEEEec-CCCEEEE
Q psy7433 5 CHNKITSDFVFLGSCSL--VATAGHSSESKNVCLWDSLLPQKK---ALVQAFV------CHDQGASSLVFAP-QHQLLIS 72 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~--l~~~g~~s~~~~i~iwd~~~~~~~---~~~~~~~------~~~~~v~~~~~~~-~~~~l~~ 72 (213)
.|..+|..+.|..+..- |+++ +.||.|..|+++..... ....... .....+++++|.+ +.+.++.
T Consensus 289 sh~~~v~~vvW~~~~~~~~f~s~---ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiV 365 (555)
T KOG1587|consen 289 SHSEPVTAVVWLQNEHNTEFFSL---SSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIV 365 (555)
T ss_pred cCCcCeEEEEEeccCCCCceEEE---ecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEE
Confidence 58889999999875444 8888 68999999998532211 1111111 1224688999988 5678999
Q ss_pred EcCCCcEEEEeccCc--------eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee------------------eceE
Q psy7433 73 AGKKGDICVIDLRQR--------VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------SPVK 126 (213)
Q Consensus 73 ~~~d~~v~iwd~~~~--------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------~~v~ 126 (213)
|+.+|.|.--+.... +....+..|.++|.++.++|-+..+...+.|..++ ..++
T Consensus 366 GTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~~~~v~ 445 (555)
T KOG1587|consen 366 GTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSSPDYVT 445 (555)
T ss_pred EcCCcEEEEEeccCCcccccccccccccccccCcceEeeecCCCccceeeeeccceeEeccccCCCCcchhhhhccceee
Confidence 999999887333221 12334556889999999999665444444487776 4599
Q ss_pred EEEEccCCc-eEEEecCCCcEEEEEccC--CeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeC
Q psy7433 127 CLAIDPHEE-FFVTGAGDGDIKVWSLSG--NHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQL 202 (213)
Q Consensus 127 ~~~~~~~~~-~l~~~~~dg~i~v~d~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~ 202 (213)
+++|||... .++++..+|.+.+||+.. ..++.+..... ...+.+.|++.+ .|+.|...|.+.+|++
T Consensus 446 ~vaWSptrpavF~~~d~~G~l~iWDLl~~~~~Pv~s~~~~~----------~~l~~~~~s~~g~~lavGd~~G~~~~~~l 515 (555)
T KOG1587|consen 446 DVAWSPTRPAVFATVDGDGNLDIWDLLQDDEEPVLSQKVCS----------PALTRVRWSPNGKLLAVGDANGTTHILKL 515 (555)
T ss_pred eeEEcCcCceEEEEEcCCCceehhhhhccccCCcccccccc----------cccceeecCCCCcEEEEecCCCcEEEEEc
Confidence 999999865 888999999999999953 34444444432 567888898844 5888889999999999
Q ss_pred CCC
Q psy7433 203 PDR 205 (213)
Q Consensus 203 ~~~ 205 (213)
...
T Consensus 516 ~~~ 518 (555)
T KOG1587|consen 516 SES 518 (555)
T ss_pred Cch
Confidence 643
|
|
| >KOG2111|consensus | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.6e-13 Score=94.95 Aligned_cols=76 Identities=18% Similarity=0.357 Sum_probs=67.3
Q ss_pred eceEEEEEccCCceEEEecCCCc-EEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEE
Q psy7433 123 SPVKCLAIDPHEEFFVTGAGDGD-IKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVR 200 (213)
Q Consensus 123 ~~v~~~~~~~~~~~l~~~~~dg~-i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw 200 (213)
..|.|++++-+|.++|++|..|+ |+|||.++++.+..++..... ..|.+++|+|+. +|++.|..|++.|+
T Consensus 182 s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~--------A~iy~iaFSp~~s~LavsSdKgTlHiF 253 (346)
T KOG2111|consen 182 SDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDR--------ADIYCIAFSPNSSWLAVSSDKGTLHIF 253 (346)
T ss_pred CceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCch--------heEEEEEeCCCccEEEEEcCCCeEEEE
Confidence 78999999999999999999997 799999999999999876543 679999999976 58888889999999
Q ss_pred eCCCCc
Q psy7433 201 QLPDRD 206 (213)
Q Consensus 201 ~~~~~~ 206 (213)
.++...
T Consensus 254 ~l~~~~ 259 (346)
T KOG2111|consen 254 SLRDTE 259 (346)
T ss_pred EeecCC
Confidence 998643
|
|
| >KOG1334|consensus | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.8e-15 Score=109.62 Aligned_cols=187 Identities=21% Similarity=0.340 Sum_probs=140.8
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccc-eeeeeeecCCceEEEEecC--CCEEEEEcCCCc
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKAL-VQAFVCHDQGASSLVFAPQ--HQLLISAGKKGD 78 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~-~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~ 78 (213)
.|.+|.+.|..+.|+..|..|+++ +.|..|.+||+ ..... +.-..+|...|...+|.|. -..+++++.||.
T Consensus 137 kL~~H~GcVntV~FN~~Gd~l~Sg---SDD~~vv~WdW---~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgq 210 (559)
T KOG1334|consen 137 KLNKHKGCVNTVHFNQRGDVLASG---SDDLQVVVWDW---VSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQ 210 (559)
T ss_pred cccCCCCccceeeecccCceeecc---CccceEEeehh---hccCcccccccccccchhhhhccCCCCCcCceeccccCc
Confidence 578899999999999999999999 89999999999 34433 3444578889988899883 467999999999
Q ss_pred EEEEeccCc-e--EEEecccCCCCeeEEEecCCC-CEEEEecCCCcee--------------------------------
Q psy7433 79 ICVIDLRQR-V--IRSRFNAHESPVKCLAIDPHE-EFFVTGAGDGDIK-------------------------------- 122 (213)
Q Consensus 79 v~iwd~~~~-~--~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~~~~i~-------------------------------- 122 (213)
+++=.+... . -...+..|.+++..++.-|+. ..|.++++|+.+.
T Consensus 211 vr~s~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~ 290 (559)
T KOG1334|consen 211 VRVSEILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVD 290 (559)
T ss_pred eeeeeeccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecC
Confidence 988766432 1 123344567777777777743 3566666666543
Q ss_pred --------------------------------------------------------------------------------
Q psy7433 123 -------------------------------------------------------------------------------- 122 (213)
Q Consensus 123 -------------------------------------------------------------------------------- 122 (213)
T Consensus 291 P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G 370 (559)
T KOG1334|consen 291 PRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDG 370 (559)
T ss_pred CCCccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEeccccccC
Confidence
Q ss_pred -----------------------eceEEEEE-ccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeE
Q psy7433 123 -----------------------SPVKCLAI-DPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVT 178 (213)
Q Consensus 123 -----------------------~~v~~~~~-~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 178 (213)
..|..+-| -|...|+++|+.=|.|.||+-++++.+..+.+.. ..|+
T Consensus 371 ~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~MegDr----------~VVN 440 (559)
T KOG1334|consen 371 SEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGDR----------HVVN 440 (559)
T ss_pred CCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHHHHHhhccc----------ceEe
Confidence 22334433 3455688888888889999988888888887765 5799
Q ss_pred EEEeCC-CCeEEEEecCCcEEEEeCCC
Q psy7433 179 QLHVDG-GSRLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 179 ~~~~~~-~~~l~s~~~d~~i~iw~~~~ 204 (213)
|+.-+| ...||+.+-|..|+||.-.+
T Consensus 441 CLEpHP~~PvLAsSGid~DVKIWTP~~ 467 (559)
T KOG1334|consen 441 CLEPHPHLPVLASSGIDHDVKIWTPLT 467 (559)
T ss_pred ccCCCCCCchhhccCCccceeeecCCc
Confidence 999998 45799999999999998743
|
|
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=5.6e-14 Score=108.39 Aligned_cols=158 Identities=15% Similarity=0.114 Sum_probs=109.7
Q ss_pred eEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEc-CCCcEEEEeccCc-
Q psy7433 10 TSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG-KKGDICVIDLRQR- 87 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~iwd~~~~- 87 (213)
..+++|+|||+.|+.+. +.++.+.||.++. .......+..+...+....|+|+|+.|+..+ .++...+|+++..
T Consensus 250 ~~~~~wSPDG~~La~~~--~~~g~~~Iy~~d~--~~~~~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~ 325 (429)
T PRK01742 250 NGAPAFSPDGSRLAFAS--SKDGVLNIYVMGA--NGGTPSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASG 325 (429)
T ss_pred cCceeECCCCCEEEEEE--ecCCcEEEEEEEC--CCCCeEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCC
Confidence 44689999999988763 4677666664421 1223445555666788999999999776554 5788888877532
Q ss_pred eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee--------------eceEEEEEccCCceEEEecCCCcEEEEEc--
Q psy7433 88 VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK--------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSL-- 151 (213)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~--------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~-- 151 (213)
.....+ .+.. ...+|+|+++.++..+.++.+. .....+.|+|+|++|+.++.++...+|++
T Consensus 326 ~~~~~l-~~~~--~~~~~SpDG~~ia~~~~~~i~~~Dl~~g~~~~lt~~~~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~ 402 (429)
T PRK01742 326 GGASLV-GGRG--YSAQISADGKTLVMINGDNVVKQDLTSGSTEVLSSTFLDESPSISPNGIMIIYSSTQGLGKVLQLVS 402 (429)
T ss_pred CCeEEe-cCCC--CCccCCCCCCEEEEEcCCCEEEEECCCCCeEEecCCCCCCCceECCCCCEEEEEEcCCCceEEEEEE
Confidence 222222 2322 4578999999998877665443 12345689999999999999998888886
Q ss_pred cCCeeeeeecCCCCceeEEEecCCCeEEEEeCC
Q psy7433 152 SGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG 184 (213)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 184 (213)
.++.....+..+. +.+...+|+|
T Consensus 403 ~~G~~~~~l~~~~----------g~~~~p~wsp 425 (429)
T PRK01742 403 ADGRFKARLPGSD----------GQVKFPAWSP 425 (429)
T ss_pred CCCCceEEccCCC----------CCCCCcccCC
Confidence 3577777776654 5677888887
|
|
| >KOG4227|consensus | Back alignment and domain information |
|---|
Probab=99.58 E-value=4.1e-14 Score=102.55 Aligned_cols=153 Identities=12% Similarity=0.122 Sum_probs=122.5
Q ss_pred eeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccC------ceEEEeccc-CCCCeeEEEecCCCCEEEEecCCCc
Q psy7433 48 VQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQ------RVIRSRFNA-HESPVKCLAIDPHEEFFVTGAGDGD 120 (213)
Q Consensus 48 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~------~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~~~~ 120 (213)
.+.+.+|.+.|+++.|+.++++|++|+.|..+++|+++. .++++.... |...|.|++|...+..+.+|..+++
T Consensus 49 qKD~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~ 128 (609)
T KOG4227|consen 49 QKDVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGT 128 (609)
T ss_pred hhhhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcce
Confidence 344567999999999999999999999999999999854 355554433 5578999999999999999999998
Q ss_pred ee-------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCe-eeeeecCCCCceeEEEecCCCeEEE
Q psy7433 121 IK-------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNH-LLYNFPGEHARSSFFKHIGQGVTQL 180 (213)
Q Consensus 121 i~-------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~ 180 (213)
+. +.|..|..+|..+.|++.+.++.|.+||.+... .+..+-.... +.....+
T Consensus 129 VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~--------~~~F~t~ 200 (609)
T KOG4227|consen 129 VIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANS--------GKNFYTA 200 (609)
T ss_pred eEeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCC--------Cccceee
Confidence 75 689999999999999999999999999997543 3222222111 2567888
Q ss_pred EeCCC--CeEEEEecCCcEEEEeCCCCccc
Q psy7433 181 HVDGG--SRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 181 ~~~~~--~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
.|+|. ..|++.+..+.+.+||++.....
T Consensus 201 ~F~P~~P~Li~~~~~~~G~~~~D~R~~~~~ 230 (609)
T KOG4227|consen 201 EFHPETPALILVNSETGGPNVFDRRMQARP 230 (609)
T ss_pred eecCCCceeEEeccccCCCCceeeccccch
Confidence 99983 46889999999999999876543
|
|
| >KOG0322|consensus | Back alignment and domain information |
|---|
Probab=99.57 E-value=4.9e-14 Score=97.00 Aligned_cols=143 Identities=23% Similarity=0.307 Sum_probs=108.7
Q ss_pred cCceEEEEEeC--CCCeEEEeeccCCCccEEEEeCCCc-------ccccceeeeeeecCCceEEEEecCCCEEEEEcCCC
Q psy7433 7 NKITSDFVFLG--SCSLVATAGHSSESKNVCLWDSLLP-------QKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKG 77 (213)
Q Consensus 7 ~~~v~~~~~~~--~~~~l~~~g~~s~~~~i~iwd~~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 77 (213)
.+.+.|..+.- ....|+.+|| ++|.+.+||+... ...+.......|..+|.++.+.+.-+.=++|+.+.
T Consensus 150 lgsvmc~~~~~~c~s~~lllaGy--Esghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~d 227 (323)
T KOG0322|consen 150 LGSVMCQDKDHACGSTFLLLAGY--ESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADD 227 (323)
T ss_pred cCceeeeeccccccceEEEEEec--cCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccc
Confidence 45677766433 3345666664 9999999999532 11133444556889999999988766777888888
Q ss_pred cEEEEeccCc--e--EEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCce
Q psy7433 78 DICVIDLRQR--V--IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEF 136 (213)
Q Consensus 78 ~v~iwd~~~~--~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~ 136 (213)
.+..|.+... . ....+.-....+..+..-||++.+++++.|+.++ ..|++++|+|+..+
T Consensus 228 kl~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~l 307 (323)
T KOG0322|consen 228 KLVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCEL 307 (323)
T ss_pred cceeeeeccccCcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCch
Confidence 8889988643 2 1222223345688899999999999999999997 88999999999999
Q ss_pred EEEecCCCcEEEEEc
Q psy7433 137 FVTGAGDGDIKVWSL 151 (213)
Q Consensus 137 l~~~~~dg~i~v~d~ 151 (213)
+++++.|++|.+|++
T Consensus 308 mAaaskD~rISLWkL 322 (323)
T KOG0322|consen 308 MAAASKDARISLWKL 322 (323)
T ss_pred hhhccCCceEEeeec
Confidence 999999999999986
|
|
| >KOG1517|consensus | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.4e-13 Score=110.59 Aligned_cols=183 Identities=19% Similarity=0.289 Sum_probs=133.5
Q ss_pred EEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeee-eecCCceEEEEec-CCCEEEEEcCCCcEEEEeccCc---
Q psy7433 13 FVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV-CHDQGASSLVFAP-QHQLLISAGKKGDICVIDLRQR--- 87 (213)
Q Consensus 13 ~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~~~-~~~~l~~~~~d~~v~iwd~~~~--- 87 (213)
++|....-+|+++| .-..|+|||. .+..+...+. +.+..++++.-+. .|+.+++|..||.|++||.+..
T Consensus 1171 ~dWqQ~~G~Ll~tG---d~r~IRIWDa---~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~d 1244 (1387)
T KOG1517|consen 1171 VDWQQQSGHLLVTG---DVRSIRIWDA---HKEQVVADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPD 1244 (1387)
T ss_pred eehhhhCCeEEecC---CeeEEEEEec---ccceeEeecccCCCccceeecccccCCceEEEeecCCceEEeecccCCcc
Confidence 46766444444442 5789999998 4444544443 2344566665543 5799999999999999999864
Q ss_pred eEEEecccCCCC--eeEEEecCCCCE-EEEecCCCcee----------------------eceEEEEEccCCceEEEecC
Q psy7433 88 VIRSRFNAHESP--VKCLAIDPHEEF-FVTGAGDGDIK----------------------SPVKCLAIDPHEEFFVTGAG 142 (213)
Q Consensus 88 ~~~~~~~~~~~~--i~~~~~~~~~~~-l~~~~~~~~i~----------------------~~v~~~~~~~~~~~l~~~~~ 142 (213)
..+...+.|... |..+.+.+.|-. +++|+.+|.|. +..++|..++....+++|+.
T Consensus 1245 s~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~ 1324 (1387)
T KOG1517|consen 1245 SLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGSA 1324 (1387)
T ss_pred ccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeeccccCccceeeeeccCCCeeeecCc
Confidence 345556667776 999999987654 99999999886 23899999999999999998
Q ss_pred CCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCc
Q psy7433 143 DGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 143 dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~ 206 (213)
+.|+||++. |+.+..+... ..++....+.+.|++|+|.. .+|+|+.|..|.||...+..
T Consensus 1325 -q~ikIy~~~-G~~l~~~k~n---~~F~~q~~gs~scL~FHP~~~llAaG~~Ds~V~iYs~~k~~ 1384 (1387)
T KOG1517|consen 1325 -QLIKIYSLS-GEQLNIIKYN---PGFMGQRIGSVSCLAFHPHRLLLAAGSADSTVSIYSCEKPR 1384 (1387)
T ss_pred -ceEEEEecC-hhhhcccccC---cccccCcCCCcceeeecchhHhhhhccCCceEEEeecCCcC
Confidence 899999985 3333333321 12233334678999999965 48889999999999887653
|
|
| >KOG4497|consensus | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.6e-12 Score=92.48 Aligned_cols=185 Identities=12% Similarity=0.157 Sum_probs=129.1
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCC------
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKK------ 76 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------ 76 (213)
++....++.+++|+|+|+.+.... ..+-.|.+|.+. +.+.. .++-....+..++|+|+|++.+..+.-
T Consensus 87 Ideg~agls~~~WSPdgrhiL~ts--eF~lriTVWSL~---t~~~~-~~~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv 160 (447)
T KOG4497|consen 87 IDEGQAGLSSISWSPDGRHILLTS--EFDLRITVWSLN---TQKGY-LLPHPKTNVKGYAFHPDGQFCAILSRRDCKDYV 160 (447)
T ss_pred eccCCCcceeeeECCCcceEeeee--cceeEEEEEEec---cceeE-EecccccCceeEEECCCCceeeeeecccHHHHH
Confidence 345567899999999997666553 688999999984 33222 223334556888888888877655321
Q ss_pred ------------------------------CcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee----
Q psy7433 77 ------------------------------GDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK---- 122 (213)
Q Consensus 77 ------------------------------~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~---- 122 (213)
..+.+||---.-.+..+. -.-.+..++|+|.++++++|+.|+.++
T Consensus 161 ~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Leykv~aYe-~~lG~k~v~wsP~~qflavGsyD~~lrvlnh 239 (447)
T KOG4497|consen 161 QISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYKVYAYE-RGLGLKFVEWSPCNQFLAVGSYDQMLRVLNH 239 (447)
T ss_pred HHHhhHHHHHHHhcCCCcccccCceECCCCcEEEEecchhhheeeeee-eccceeEEEeccccceEEeeccchhhhhhce
Confidence 123344321111111111 234678899999999999999998775
Q ss_pred -------------------------------------------------------------------------------e
Q psy7433 123 -------------------------------------------------------------------------------S 123 (213)
Q Consensus 123 -------------------------------------------------------------------------------~ 123 (213)
-
T Consensus 240 ~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~ 319 (447)
T KOG4497|consen 240 FTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAHIWEESETIYEQQMTPVKVHKLKPPTDFPNPKC 319 (447)
T ss_pred eeeeehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCccccCccccchhhhhhhhcceeeecccCCCCCCCccc
Confidence 4
Q ss_pred ceEEEEEccCCceEEEecCC--CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCC-CeEEEEecCCcEEEE
Q psy7433 124 PVKCLAIDPHEEFFVTGAGD--GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG-SRLFSCGADGSMKVR 200 (213)
Q Consensus 124 ~v~~~~~~~~~~~l~~~~~d--g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~d~~i~iw 200 (213)
.+.-++|++|..++++-... +.+-+||++..+.-..+... .+|....|+|+ .+|+.+.....+++|
T Consensus 320 g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLiQk-----------~piraf~WdP~~prL~vctg~srLY~W 388 (447)
T KOG4497|consen 320 GAGKLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVLIQK-----------HPIRAFEWDPGRPRLVVCTGKSRLYFW 388 (447)
T ss_pred ccceeeecCCceEEeeecCCCCceEEEEechhhhhhhhhhhc-----------cceeEEEeCCCCceEEEEcCCceEEEE
Confidence 56678999999999888654 67999999987766665543 57999999996 467777777789999
Q ss_pred eCCCC
Q psy7433 201 QLPDR 205 (213)
Q Consensus 201 ~~~~~ 205 (213)
.....
T Consensus 389 ~psg~ 393 (447)
T KOG4497|consen 389 APSGP 393 (447)
T ss_pred cCCCc
Confidence 87653
|
|
| >KOG1517|consensus | Back alignment and domain information |
|---|
Probab=99.56 E-value=7.8e-13 Score=106.36 Aligned_cols=189 Identities=21% Similarity=0.302 Sum_probs=132.2
Q ss_pred CceEEEEEeC--CCCeEEEeeccCCCccEEEEeCCCc--ccccceeeeee-------ecCCceEEEEecCCCEEEEEcCC
Q psy7433 8 KITSDFVFLG--SCSLVATAGHSSESKNVCLWDSLLP--QKKALVQAFVC-------HDQGASSLVFAPQHQLLISAGKK 76 (213)
Q Consensus 8 ~~v~~~~~~~--~~~~l~~~g~~s~~~~i~iwd~~~~--~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~~d 76 (213)
..|+.+.+-. |..++.++ +.||.|+||+--.. ++.+.+..+.+ ..+.=.-+.|..+..+|+++++-
T Consensus 1110 t~Vs~l~liNe~D~aLlLta---s~dGvIRIwk~y~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~ 1186 (1387)
T KOG1517|consen 1110 TRVSDLELINEQDDALLLTA---SSDGVIRIWKDYADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDV 1186 (1387)
T ss_pred Cccceeeeecccchhheeee---ccCceEEEecccccccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCe
Confidence 5688888765 55678888 89999999985221 22333333322 11222456787766677777778
Q ss_pred CcEEEEeccCceEEEeccc-CCCCeeEEEecC-CCCEEEEecCCCcee----------------------eceEEEEEcc
Q psy7433 77 GDICVIDLRQRVIRSRFNA-HESPVKCLAIDP-HEEFFVTGAGDGDIK----------------------SPVKCLAIDP 132 (213)
Q Consensus 77 ~~v~iwd~~~~~~~~~~~~-~~~~i~~~~~~~-~~~~l~~~~~~~~i~----------------------~~v~~~~~~~ 132 (213)
..|+|||......+..++. ....++++.-+- .|+.+++|..||.++ .+|..+.+.+
T Consensus 1187 r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~ 1266 (1387)
T KOG1517|consen 1187 RSIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQR 1266 (1387)
T ss_pred eEEEEEecccceeEeecccCCCccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeec
Confidence 8999999998877777653 334566665543 578999999999997 4488999998
Q ss_pred CCc-eEEEecCCCcEEEEEccCCeeeee--ecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCcc
Q psy7433 133 HEE-FFVTGAGDGDIKVWSLSGNHLLYN--FPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 133 ~~~-~l~~~~~dg~i~v~d~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~ 207 (213)
.|- .|++|+.||.|++||+|....... +..|.. .|+..+++..++.. .+|+|+. +.|+||++...+.
T Consensus 1267 ~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~-------yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~G~~l 1337 (1387)
T KOG1517|consen 1267 QGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWE-------YGSALTALTVHEHAPIIASGSA-QLIKIYSLSGEQL 1337 (1387)
T ss_pred CCCcceeeeccCCeEEEEecccCcccccceeeeccc-------cCccceeeeeccCCCeeeecCc-ceEEEEecChhhh
Confidence 776 499999999999999987422221 212211 12459999999865 5777777 9999999987644
|
|
| >KOG2321|consensus | Back alignment and domain information |
|---|
Probab=99.55 E-value=5.9e-13 Score=100.67 Aligned_cols=191 Identities=11% Similarity=0.173 Sum_probs=140.2
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCccccccee--------------------------eeeeec---
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQ--------------------------AFVCHD--- 55 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~--------------------------~~~~~~--- 55 (213)
+|....+.|..+|||+|+.+.| .....|++||+.+.. .+..+ .+.-|.
T Consensus 49 e~p~ast~ik~s~DGqY~lAtG--~YKP~ikvydlanLS-LKFERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak~G 125 (703)
T KOG2321|consen 49 EMPTASTRIKVSPDGQYLLATG--TYKPQIKVYDLANLS-LKFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAKYG 125 (703)
T ss_pred CCccccceeEecCCCcEEEEec--ccCCceEEEEcccce-eeeeecccccceeEEEeccchhhheEeecCceeeehhhcC
Confidence 3566788899999999988777 689999999984311 00000 011111
Q ss_pred --------CCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----
Q psy7433 56 --------QGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----- 122 (213)
Q Consensus 56 --------~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----- 122 (213)
..-..++++.-..-|+.++....|+-++++.|..+..+....+.++++..++...+|++|+.+|.+-
T Consensus 126 ~hy~~RIP~~GRDm~y~~~scDly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR 205 (703)
T KOG2321|consen 126 RHYRTRIPKFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPR 205 (703)
T ss_pred eeeeeecCcCCccccccCCCccEEEeecCcceEEEEccccccccccccccccceeeeecCccceEEecccCceEEEecch
Confidence 1122344443222355555566899999999999999988889999999999999999999999875
Q ss_pred -----------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEE
Q psy7433 123 -----------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQ 179 (213)
Q Consensus 123 -----------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 179 (213)
..|+++.|+.+|-.+++|+.+|.+.|||+|+.+++..-..... -+|..
T Consensus 206 ~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e---------~pi~~ 276 (703)
T KOG2321|consen 206 DKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYE---------LPIKK 276 (703)
T ss_pred hhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCCc---------cceee
Confidence 4599999999999999999999999999999888765543332 68999
Q ss_pred EEeCCC---CeEEEEecCCcEEEEeCCCCccc
Q psy7433 180 LHVDGG---SRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 180 ~~~~~~---~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
+.|.+. +.++|. ....++|||-.+++..
T Consensus 277 l~~~~~~~q~~v~S~-Dk~~~kiWd~~~Gk~~ 307 (703)
T KOG2321|consen 277 LDWQDTDQQNKVVSM-DKRILKIWDECTGKPM 307 (703)
T ss_pred ecccccCCCceEEec-chHHhhhcccccCCce
Confidence 999763 234443 4568999998877654
|
|
| >KOG2139|consensus | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.7e-12 Score=93.29 Aligned_cols=177 Identities=13% Similarity=0.155 Sum_probs=120.9
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeee-eecCCceEEEEecCC-CEEEEEcCCCcEEEEecc
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV-CHDQGASSLVFAPQH-QLLISAGKKGDICVIDLR 85 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~-~~l~~~~~d~~v~iwd~~ 85 (213)
..++-++|++.-..+|++ ..|..|++|+-+. .+...++ .....|++++|-|.+ ..|+.|.. +-|.+|...
T Consensus 99 ~dlr~~aWhqH~~~fava---~nddvVriy~kss----t~pt~Lks~sQrnvtclawRPlsaselavgCr-~gIciW~~s 170 (445)
T KOG2139|consen 99 IDLRGVAWHQHIIAFAVA---TNDDVVRIYDKSS----TCPTKLKSVSQRNVTCLAWRPLSASELAVGCR-AGICIWSDS 170 (445)
T ss_pred cceeeEeechhhhhhhhh---ccCcEEEEeccCC----CCCceecchhhcceeEEEeccCCcceeeeeec-ceeEEEEcC
Confidence 346788999977777887 5899999999632 3333333 234679999999954 55666655 568899875
Q ss_pred Cc----eE----------EEecccCCCCeeEEEecCCCCEEEEecCCCc-ee-----------------eceEEEEEccC
Q psy7433 86 QR----VI----------RSRFNAHESPVKCLAIDPHEEFFVTGAGDGD-IK-----------------SPVKCLAIDPH 133 (213)
Q Consensus 86 ~~----~~----------~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~-i~-----------------~~v~~~~~~~~ 133 (213)
.. .. +.+.++| .+|++++|.+||..+++++.+.. +. ..++-+.||||
T Consensus 171 ~tln~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPd 249 (445)
T KOG2139|consen 171 RTLNANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPD 249 (445)
T ss_pred cccccccccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCC
Confidence 32 11 1112223 68999999999999999987553 32 67889999999
Q ss_pred CceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCC
Q psy7433 134 EEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLP 203 (213)
Q Consensus 134 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~ 203 (213)
+.+|++++-|+..++|.....-......... +.|....|+|.+.++--...|.-++|.+.
T Consensus 250 gd~lfaAt~davfrlw~e~q~wt~erw~lgs----------grvqtacWspcGsfLLf~~sgsp~lysl~ 309 (445)
T KOG2139|consen 250 GDVLFAATCDAVFRLWQENQSWTKERWILGS----------GRVQTACWSPCGSFLLFACSGSPRLYSLT 309 (445)
T ss_pred CCEEEEecccceeeeehhcccceecceeccC----------CceeeeeecCCCCEEEEEEcCCceEEEEe
Confidence 9999999999999999654332222222222 57999999997753222233344555443
|
|
| >KOG1963|consensus | Back alignment and domain information |
|---|
Probab=99.52 E-value=2e-12 Score=101.83 Aligned_cols=195 Identities=14% Similarity=0.197 Sum_probs=146.1
Q ss_pred eEEEEEeCCCCeEEEeeccCCCccEEEEeCCCccccccee-eeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccC--
Q psy7433 10 TSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQ-AFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQ-- 86 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~-- 86 (213)
-.++.+++.|.+.+.. .+..+.+|...........+ .-..|.-.+++.++||++++++++..||.|.+|.--.
T Consensus 163 ~~~I~~~~~ge~~~i~----~~~~~~~~~v~~~~~~~~~~~~~~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~ 238 (792)
T KOG1963|consen 163 PKSIVDNNSGEFKGIV----HMCKIHIYFVPKHTKHTSSRDITVHHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSS 238 (792)
T ss_pred CccEEEcCCceEEEEE----EeeeEEEEEecccceeeccchhhhhhcccceeEEeccccceEEEeccCCcEEEEeccccc
Confidence 5678888999888887 67889999984311111111 1123555689999999999999999999999996433
Q ss_pred c--eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee----------------eceEEEEEccCCceEEEecCCCcEEE
Q psy7433 87 R--VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----------------SPVKCLAIDPHEEFFVTGAGDGDIKV 148 (213)
Q Consensus 87 ~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------~~v~~~~~~~~~~~l~~~~~dg~i~v 148 (213)
. .....+.-|...|.+++|+++|.+|++|+..+-+. ++|..+.++||+.+.+...+|+.|.+
T Consensus 239 ~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~l 318 (792)
T KOG1963|consen 239 DDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGKKQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHL 318 (792)
T ss_pred cccccceEEEecccccceeEEecCCceEeecccceEEEEEeecCCCcccccccCCeeEEEEEcCCCCeEEEEecCceEEE
Confidence 1 23445667899999999999999999999998664 89999999999999999999999999
Q ss_pred EEccCCeeeeeecCCCCceeE-EEecCCCeEEEEeCC-CCeEEEEecCCcEEEEeCCCCccc
Q psy7433 149 WSLSGNHLLYNFPGEHARSSF-FKHIGQGVTQLHVDG-GSRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 149 ~d~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~-~~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
....+.+...++.+....... .....+-.+.+.++| -+.++-.+..|.|.+||+-+...+
T Consensus 319 i~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~~vln~~~g~vQ~ydl~td~~i 380 (792)
T KOG1963|consen 319 IKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRTNSLVLNGHPGHVQFYDLYTDSTI 380 (792)
T ss_pred EeccchhhhhhccCccCCCccccccccccceeEEEcCCCCceeecCCCceEEEEecccccee
Confidence 887666655555554332111 111124567788888 566888899999999999887554
|
|
| >KOG1240|consensus | Back alignment and domain information |
|---|
Probab=99.52 E-value=5.3e-13 Score=108.61 Aligned_cols=154 Identities=19% Similarity=0.276 Sum_probs=119.9
Q ss_pred cccceeeeeeecCCceEEEEecCC-CEEEEEcCCCcEEEEeccCc-------eEEEecccCCCCeeEEEecCCCCEEEEe
Q psy7433 44 KKALVQAFVCHDQGASSLVFAPQH-QLLISAGKKGDICVIDLRQR-------VIRSRFNAHESPVKCLAIDPHEEFFVTG 115 (213)
Q Consensus 44 ~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~iwd~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 115 (213)
.+..+..+..|...+..++.++.. .++++|+.||+|++||.+.- +...++.....++.++...+.+..+|++
T Consensus 1037 ~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~ 1116 (1431)
T KOG1240|consen 1037 RGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVS 1116 (1431)
T ss_pred cceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEE
Confidence 567788888899999999988754 99999999999999999642 2223333356789999999999999999
Q ss_pred cCCCcee-------------------------eceEEE-EEcc-CCc-eEEEecCCCcEEEEEccCCeeeeeecCCCCce
Q psy7433 116 AGDGDIK-------------------------SPVKCL-AIDP-HEE-FFVTGAGDGDIKVWSLSGNHLLYNFPGEHARS 167 (213)
Q Consensus 116 ~~~~~i~-------------------------~~v~~~-~~~~-~~~-~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~ 167 (213)
+.||.+. +.+.+| +|.. .+. .++.+...+.|..||++.......++.....
T Consensus 1117 t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~h- 1195 (1431)
T KOG1240|consen 1117 TKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRH- 1195 (1431)
T ss_pred cCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCccc-
Confidence 9999886 222222 2322 223 7888888999999999988777666654322
Q ss_pred eEEEecCCCeEEEEeCC-CCeEEEEecCCcEEEEeCCCC
Q psy7433 168 SFFKHIGQGVTQLHVDG-GSRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 168 ~~~~~~~~~v~~~~~~~-~~~l~s~~~d~~i~iw~~~~~ 205 (213)
+.|++++.+| +..++.|...|.+.+||++=+
T Consensus 1196 -------G~vTSi~idp~~~WlviGts~G~l~lWDLRF~ 1227 (1431)
T KOG1240|consen 1196 -------GLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFR 1227 (1431)
T ss_pred -------cceeEEEecCCceEEEEecCCceEEEEEeecC
Confidence 7899999999 457999999999999999754
|
|
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.6e-11 Score=95.04 Aligned_cols=185 Identities=11% Similarity=0.075 Sum_probs=113.7
Q ss_pred ccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEE-EEcCCC--cEE
Q psy7433 4 QCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLI-SAGKKG--DIC 80 (213)
Q Consensus 4 ~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~--~v~ 80 (213)
..+...+....|+|+|+.|+..........|.+|++.. +.. ..+....+......|+|+|+.|+ +.+.++ .|.
T Consensus 195 ~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~---g~~-~~l~~~~g~~~~~~~SpDG~~la~~~~~~g~~~Iy 270 (430)
T PRK00178 195 LQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDT---GRR-EQITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIY 270 (430)
T ss_pred ecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCC---CCE-EEccCCCCCcCCeEECCCCCEEEEEEccCCCceEE
Confidence 34566788999999999998774211234688999843 222 22222234455789999998877 444444 588
Q ss_pred EEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCC-C--cee----------------eceEEEEEccCCceEEEec
Q psy7433 81 VIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGD-G--DIK----------------SPVKCLAIDPHEEFFVTGA 141 (213)
Q Consensus 81 iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~-~--~i~----------------~~v~~~~~~~~~~~l~~~~ 141 (213)
+||+.+++.. .+..+........|+|+++.++..+.. + .+. .......|+|+|++++..+
T Consensus 271 ~~d~~~~~~~-~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~lt~~~~~~~~~~~Spdg~~i~~~~ 349 (430)
T PRK00178 271 VMDLASRQLS-RVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERVTFVGNYNARPRLSADGKTLVMVH 349 (430)
T ss_pred EEECCCCCeE-EcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecCCCCccceEECCCCCEEEEEE
Confidence 8899887654 344455556678999999987766542 2 222 1123468999999887765
Q ss_pred CC-C--cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEE-EecCC--cEEEEeCCCC
Q psy7433 142 GD-G--DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFS-CGADG--SMKVRQLPDR 205 (213)
Q Consensus 142 ~d-g--~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s-~~~d~--~i~iw~~~~~ 205 (213)
.+ + .|.++|+.+++... +... .......|+|++. ++. ...++ .+.++++...
T Consensus 350 ~~~~~~~l~~~dl~tg~~~~-lt~~-----------~~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~~g~ 408 (430)
T PRK00178 350 RQDGNFHVAAQDLQRGSVRI-LTDT-----------SLDESPSVAPNGTMLIYATRQQGRGVLMLVSINGR 408 (430)
T ss_pred ccCCceEEEEEECCCCCEEE-ccCC-----------CCCCCceECCCCCEEEEEEecCCceEEEEEECCCC
Confidence 43 3 57888987765422 2211 1112357898764 433 33333 4666666543
|
|
| >KOG4497|consensus | Back alignment and domain information |
|---|
Probab=99.49 E-value=2e-12 Score=91.92 Aligned_cols=168 Identities=14% Similarity=0.177 Sum_probs=118.0
Q ss_pred ceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCC-EEEEEcCCCcEEEEeccCc
Q psy7433 9 ITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQ-LLISAGKKGDICVIDLRQR 87 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~ 87 (213)
.|.-+.|..+..++..+- ..++.|.+|++ .+.+-...+.....++.+++|||+|+ +|.+..-+-.|.+|.+.+.
T Consensus 50 ki~yieW~ads~~ilC~~--yk~~~vqvwsl---~Qpew~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~ 124 (447)
T KOG4497|consen 50 KIVYIEWKADSCHILCVA--YKDPKVQVWSL---VQPEWYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQ 124 (447)
T ss_pred Hhhheeeeccceeeeeee--eccceEEEEEe---ecceeEEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccc
Confidence 345566776666655554 57889999999 34444455566678899999999995 5556677899999999876
Q ss_pred eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee--------------------eceEEEEEccCCceEEEecCCCcEE
Q psy7433 88 VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK--------------------SPVKCLAIDPHEEFFVTGAGDGDIK 147 (213)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~--------------------~~v~~~~~~~~~~~l~~~~~dg~i~ 147 (213)
+... ++-....+..++|+|+|++.+.++...... -..+.+.|+|||..|+
T Consensus 125 ~~~~-~~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~la--------- 194 (447)
T KOG4497|consen 125 KGYL-LPHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLA--------- 194 (447)
T ss_pred eeEE-ecccccCceeEEECCCCceeeeeecccHHHHHHHHhhHHHHHHHhcCCCcccccCceECCCCcEEE---------
Confidence 5443 232344568899999999888877643211 5678899999998765
Q ss_pred EEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCC-CCeEEEEecCCcEEEEeC
Q psy7433 148 VWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG-GSRLFSCGADGSMKVRQL 202 (213)
Q Consensus 148 v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~s~~~d~~i~iw~~ 202 (213)
|||---.-.+..++. +-.+..++|+| +..|+.|+.|+.+|+-+-
T Consensus 195 Vwd~~Leykv~aYe~-----------~lG~k~v~wsP~~qflavGsyD~~lrvlnh 239 (447)
T KOG4497|consen 195 VWDNVLEYKVYAYER-----------GLGLKFVEWSPCNQFLAVGSYDQMLRVLNH 239 (447)
T ss_pred Eecchhhheeeeeee-----------ccceeEEEeccccceEEeeccchhhhhhce
Confidence 566422222222222 24689999999 556899999999988653
|
|
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.5e-11 Score=94.96 Aligned_cols=183 Identities=13% Similarity=0.113 Sum_probs=116.4
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEE-EcCCC--cEEE
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLIS-AGKKG--DICV 81 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~--~v~i 81 (213)
.+...+...+|+|+|++|+.+........|++||+. +++. ..+..+...+.+++|+|+++.|+. .+.++ .|++
T Consensus 187 ~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~---~g~~-~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~i~~ 262 (417)
T TIGR02800 187 RSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLA---TGQR-EKVASFPGMNGAPAFSPDGSKLAVSLSKDGNPDIYV 262 (417)
T ss_pred cCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECC---CCCE-EEeecCCCCccceEECCCCCEEEEEECCCCCccEEE
Confidence 455678889999999999987431223579999984 2222 223334556677899999987764 44444 5888
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCC-C--cee----------------eceEEEEEccCCceEEEecC
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGD-G--DIK----------------SPVKCLAIDPHEEFFVTGAG 142 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~-~--~i~----------------~~v~~~~~~~~~~~l~~~~~ 142 (213)
||+.+++.. .+..+........|+|+++.++..+.. + .+. .....+.|+|++++++.++.
T Consensus 263 ~d~~~~~~~-~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~~l~~~~~~~~~~~~spdg~~i~~~~~ 341 (417)
T TIGR02800 263 MDLDGKQLT-RLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVRRLTFRGGYNASPSWSPDGDLIAFVHR 341 (417)
T ss_pred EECCCCCEE-ECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecCCCCccCeEECCCCCEEEEEEc
Confidence 998877543 333344445677899999988766543 2 222 33457789999998888877
Q ss_pred CC---cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCC---cEEEEeCCC
Q psy7433 143 DG---DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADG---SMKVRQLPD 204 (213)
Q Consensus 143 dg---~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~---~i~iw~~~~ 204 (213)
++ .|.+||+.++... .+... .......|+|++ .|+..+.++ .+.+.+...
T Consensus 342 ~~~~~~i~~~d~~~~~~~-~l~~~-----------~~~~~p~~spdg~~l~~~~~~~~~~~l~~~~~~g 398 (417)
T TIGR02800 342 EGGGFNIAVMDLDGGGER-VLTDT-----------GLDESPSFAPNGRMILYATTRGGRGVLGLVSTDG 398 (417)
T ss_pred cCCceEEEEEeCCCCCeE-EccCC-----------CCCCCceECCCCCEEEEEEeCCCcEEEEEEECCC
Confidence 65 7888898765432 22211 122345788865 455554433 355555443
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >KOG0644|consensus | Back alignment and domain information |
|---|
Probab=99.48 E-value=1e-14 Score=114.32 Aligned_cols=121 Identities=14% Similarity=0.274 Sum_probs=109.2
Q ss_pred ccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCceeec
Q psy7433 45 KALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIKSP 124 (213)
Q Consensus 45 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~~~ 124 (213)
.+.++.+.+|...|.|+.|...|.++++|++|..++||..++..++...++|.+.|+.++.+.++
T Consensus 180 mk~ikrLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n--------------- 244 (1113)
T KOG0644|consen 180 MKNIKRLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNN--------------- 244 (1113)
T ss_pred HHHHHHHHhhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhh---------------
Confidence 34566677899999999999999999999999999999999999999999999999988877543
Q ss_pred eEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCC
Q psy7433 125 VKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLP 203 (213)
Q Consensus 125 v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~ 203 (213)
.++++++.|..|++|.++.+.++..+.+|. +.|++++|+|-. +.+.||++++||.+
T Consensus 245 ----------~~iaaaS~D~vIrvWrl~~~~pvsvLrght----------gavtaiafsP~~---sss~dgt~~~wd~r 300 (1113)
T KOG0644|consen 245 ----------TMIAAASNDKVIRVWRLPDGAPVSVLRGHT----------GAVTAIAFSPRA---SSSDDGTCRIWDAR 300 (1113)
T ss_pred ----------hhhhhcccCceEEEEecCCCchHHHHhccc----------cceeeeccCccc---cCCCCCceEecccc
Confidence 478889999999999999999999999997 899999999843 78899999999998
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=99.46 E-value=3.4e-11 Score=90.76 Aligned_cols=78 Identities=14% Similarity=0.190 Sum_probs=57.5
Q ss_pred eEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEc-CCCcEEEEeccCce
Q psy7433 10 TSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG-KKGDICVIDLRQRV 88 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~iwd~~~~~ 88 (213)
-..+.|+|||+++.++ +.|+.|.++|+ .+.+.+.+++. ......++++++|++++++. .++.+.++|.++.+
T Consensus 39 h~~~~~s~Dgr~~yv~---~rdg~vsviD~---~~~~~v~~i~~-G~~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle 111 (369)
T PF02239_consen 39 HAGLKFSPDGRYLYVA---NRDGTVSVIDL---ATGKVVATIKV-GGNPRGIAVSPDGKYVYVANYEPGTVSVIDAETLE 111 (369)
T ss_dssp EEEEE-TT-SSEEEEE---ETTSEEEEEET---TSSSEEEEEE--SSEEEEEEE--TTTEEEEEEEETTEEEEEETTT--
T ss_pred eeEEEecCCCCEEEEE---cCCCeEEEEEC---CcccEEEEEec-CCCcceEEEcCCCCEEEEEecCCCceeEecccccc
Confidence 3456799999999998 57999999999 56777777764 34568899999999998775 57899999999887
Q ss_pred EEEecc
Q psy7433 89 IRSRFN 94 (213)
Q Consensus 89 ~~~~~~ 94 (213)
+++.++
T Consensus 112 ~v~~I~ 117 (369)
T PF02239_consen 112 PVKTIP 117 (369)
T ss_dssp EEEEEE
T ss_pred ceeecc
Confidence 776553
|
... |
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=6.3e-12 Score=96.97 Aligned_cols=158 Identities=15% Similarity=0.161 Sum_probs=103.2
Q ss_pred ceEEEEEeCCCCeEEEeeccCCCc--cEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCC-Cc--EEEEe
Q psy7433 9 ITSDFVFLGSCSLVATAGHSSESK--NVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKK-GD--ICVID 83 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s~~~--~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~~--v~iwd 83 (213)
.+.+.+|+|||+.|+... +.++ .|.+||++ .+. ...+..+...+....|+|+|+.|+..+.+ +. |.++|
T Consensus 244 ~~~~~~~SPDG~~La~~~--~~~g~~~I~~~d~~---tg~-~~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d 317 (429)
T PRK03629 244 HNGAPAFSPDGSKLAFAL--SKTGSLNLYVMDLA---SGQ-IRQVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVN 317 (429)
T ss_pred CcCCeEECCCCCEEEEEE--cCCCCcEEEEEECC---CCC-EEEccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEE
Confidence 345689999999888653 2344 58889984 332 23344344567889999999988766643 44 44556
Q ss_pred ccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCc---ee---------------eceEEEEEccCCceEEEecCCCc
Q psy7433 84 LRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGD---IK---------------SPVKCLAIDPHEEFFVTGAGDGD 145 (213)
Q Consensus 84 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~---i~---------------~~v~~~~~~~~~~~l~~~~~dg~ 145 (213)
+.+++.. .+...........|+|+++.++..+.++. +. .......|+|||++|+.++.++.
T Consensus 318 ~~~g~~~-~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~~Lt~~~~~~~p~~SpDG~~i~~~s~~~~ 396 (429)
T PRK03629 318 INGGAPQ-RITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLTDTFLDETPSIAPNGTMVIYSSSQGM 396 (429)
T ss_pred CCCCCeE-EeecCCCCccCEEECCCCCEEEEEEccCCCceEEEEECCCCCeEEeCCCCCCCCceECCCCCEEEEEEcCCC
Confidence 6665443 33333445667899999999887654431 21 12345789999999998887764
Q ss_pred ---EEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCC
Q psy7433 146 ---IKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG 184 (213)
Q Consensus 146 ---i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 184 (213)
+.++++ ++.....+..+. +.+...+|+|
T Consensus 397 ~~~l~~~~~-~G~~~~~l~~~~----------~~~~~p~Wsp 427 (429)
T PRK03629 397 GSVLNLVST-DGRFKARLPATD----------GQVKFPAWSP 427 (429)
T ss_pred ceEEEEEEC-CCCCeEECccCC----------CCcCCcccCC
Confidence 566666 455555565544 5677778876
|
|
| >KOG1354|consensus | Back alignment and domain information |
|---|
Probab=99.43 E-value=4.3e-12 Score=90.68 Aligned_cols=199 Identities=18% Similarity=0.292 Sum_probs=133.5
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCccc--ccceeeeeeec------------CCceEEEEecCCC--EEE
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQK--KALVQAFVCHD------------QGASSLVFAPQHQ--LLI 71 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~--~~~~~~~~~~~------------~~v~~~~~~~~~~--~l~ 71 (213)
.-|.++.|...|.+||+| ..+|.|.++.-+...+ ......++.|. ..|..+.|.++++ .++
T Consensus 26 diis~vef~~~Ge~LatG---dkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FL 102 (433)
T KOG1354|consen 26 DIISAVEFDHYGERLATG---DKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFL 102 (433)
T ss_pred cceeeEEeecccceEeec---CCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEE
Confidence 458899999999999999 8999999997532211 11334444443 4688899988654 566
Q ss_pred EEcCCCcEEEEeccCceEE-----------------------------------Eec-ccCCCCeeEEEecCCCCEEEEe
Q psy7433 72 SAGKKGDICVIDLRQRVIR-----------------------------------SRF-NAHESPVKCLAIDPHEEFFVTG 115 (213)
Q Consensus 72 ~~~~d~~v~iwd~~~~~~~-----------------------------------~~~-~~~~~~i~~~~~~~~~~~l~~~ 115 (213)
....|.+|++|.+...... +.+ ..|.--|.+++++.|...++++
T Consensus 103 lstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSA 182 (433)
T KOG1354|consen 103 LSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSA 182 (433)
T ss_pred EecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeec
Confidence 6678999999988542100 011 2355567889999988888876
Q ss_pred cCCCcee-------------------------eceEEEEEccC-CceEEEecCCCcEEEEEccCCee------eeeecCC
Q psy7433 116 AGDGDIK-------------------------SPVKCLAIDPH-EEFFVTGAGDGDIKVWSLSGNHL------LYNFPGE 163 (213)
Q Consensus 116 ~~~~~i~-------------------------~~v~~~~~~~~-~~~l~~~~~dg~i~v~d~~~~~~------~~~~~~~ 163 (213)
..=. |. .-|++..|+|. ..+++-.+..|.|++.|+|.... +...+..
T Consensus 183 DdLR-INLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEeped 261 (433)
T KOG1354|consen 183 DDLR-INLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPED 261 (433)
T ss_pred ccee-eeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccC
Confidence 5422 11 67888899996 45888889999999999984322 1111111
Q ss_pred CCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCccccc
Q psy7433 164 HARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDAVVH 210 (213)
Q Consensus 164 ~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~ 210 (213)
.....++...-..|..+.|++.++++..-.=-+|++||+.....++.
T Consensus 262 p~~rsffseiIsSISDvKFs~sGryilsRDyltvk~wD~nme~~pv~ 308 (433)
T KOG1354|consen 262 PSSRSFFSEIISSISDVKFSHSGRYILSRDYLTVKLWDLNMEAKPVE 308 (433)
T ss_pred CcchhhHHHHhhhhhceEEccCCcEEEEeccceeEEEeccccCCcce
Confidence 11122233333678999999987755555557999999966555543
|
|
| >KOG1409|consensus | Back alignment and domain information |
|---|
Probab=99.43 E-value=5.7e-12 Score=89.96 Aligned_cols=191 Identities=19% Similarity=0.354 Sum_probs=148.8
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCc-ccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLP-QKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDIC 80 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 80 (213)
.++||.+.|++...-|...-+.+. +.|.+++||--++. +....+.. .-..+++++.+.++...|+.|-..|++.
T Consensus 19 ~~eG~~d~vn~~~l~~~e~gv~~~---s~drtvrv~lkrds~q~wpsI~~--~mP~~~~~~~y~~e~~~L~vg~~ngtvt 93 (404)
T KOG1409|consen 19 KIEGSQDDVNAAILIPKEEGVISV---SEDRTVRVWLKRDSGQYWPSIYH--YMPSPCSAMEYVSESRRLYVGQDNGTVT 93 (404)
T ss_pred hhcCchhhhhhheeccCCCCeEEc---cccceeeeEEeccccccCchhhh--hCCCCceEeeeeccceEEEEEEecceEE
Confidence 468899999999999988889999 89999999975421 11222222 2356789999999999999999999998
Q ss_pred EEeccC----ceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee----------------------------------
Q psy7433 81 VIDLRQ----RVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK---------------------------------- 122 (213)
Q Consensus 81 iwd~~~----~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~---------------------------------- 122 (213)
-+.+.. ....+....|..++..+-|+....++++.+.|..+.
T Consensus 94 efs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~~t~~~~d~~~~fvGd~ 173 (404)
T KOG1409|consen 94 EFALSEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFETPASALQFDALYAFVGDH 173 (404)
T ss_pred EEEhhhhhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEeeccCCCCceeeEEEEeccc
Confidence 887643 344555667888888888888888888888877653
Q ss_pred ------------------------eceEEEEEccCCceEEEecCCCcEEEEEccC-CeeeeeecCCCCceeEEEecCCCe
Q psy7433 123 ------------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSG-NHLLYNFPGEHARSSFFKHIGQGV 177 (213)
Q Consensus 123 ------------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~-~~~~~~~~~~~~~~~~~~~~~~~v 177 (213)
..+.+++|.|..+.+.+|..|..+.+||+.- ......+.+|. ..|
T Consensus 174 ~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~----------~kV 243 (404)
T KOG1409|consen 174 SGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHN----------DKV 243 (404)
T ss_pred ccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccch----------hhh
Confidence 7889999999999999999999999999953 23445566665 567
Q ss_pred EEEEeCC-CCeEEEEecCCcEEEEeCCCCcc
Q psy7433 178 TQLHVDG-GSRLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 178 ~~~~~~~-~~~l~s~~~d~~i~iw~~~~~~~ 207 (213)
..+...+ -.++.+++.||.|.+|+++....
T Consensus 244 ~~l~~~~~t~~l~S~~edg~i~~w~mn~~r~ 274 (404)
T KOG1409|consen 244 QALSYAQHTRQLISCGEDGGIVVWNMNVKRV 274 (404)
T ss_pred hhhhhhhhheeeeeccCCCeEEEEeccceee
Confidence 7766655 35699999999999999986543
|
|
| >KOG0771|consensus | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.6e-12 Score=93.62 Aligned_cols=144 Identities=18% Similarity=0.224 Sum_probs=107.2
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeee--eecCCceEEEEecCC---CE--EEEEcC
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV--CHDQGASSLVFAPQH---QL--LISAGK 75 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~---~~--l~~~~~ 75 (213)
..+|.+.|.++.|+|||++|++. +.| ..+||+++ ++..+.... ..+.....+.|+.++ .+ ++....
T Consensus 182 e~~~~~eV~DL~FS~dgk~lasi---g~d-~~~VW~~~---~g~~~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~ 254 (398)
T KOG0771|consen 182 EIAHHAEVKDLDFSPDGKFLASI---GAD-SARVWSVN---TGAALARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFP 254 (398)
T ss_pred hHhhcCccccceeCCCCcEEEEe---cCC-ceEEEEec---cCchhhhcCCcccchhhhhceecccCCCceEEEEEecCC
Confidence 46799999999999999999999 466 99999995 444443332 234456778888766 32 333344
Q ss_pred CCcEEEEeccCceE-----EEecccCCCCeeEEEecCCCCEEEEecCCCcee------------------eceEEEEEcc
Q psy7433 76 KGDICVIDLRQRVI-----RSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------SPVKCLAIDP 132 (213)
Q Consensus 76 d~~v~iwd~~~~~~-----~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------~~v~~~~~~~ 132 (213)
-+.|+.||+..... ..+.......|++++.+++|++++.|+.+|.+. ..|+.+.|+|
T Consensus 255 ~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~P 334 (398)
T KOG0771|consen 255 GGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSP 334 (398)
T ss_pred CCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEEEEEeceeeeeEeehhhheeeeeeEEEcC
Confidence 56677777643221 111122345799999999999999999999875 7899999999
Q ss_pred CCceEEEecCCCcEEEEEccC
Q psy7433 133 HEEFFVTGAGDGDIKVWSLSG 153 (213)
Q Consensus 133 ~~~~l~~~~~dg~i~v~d~~~ 153 (213)
+.+++++.+.+....+..+.-
T Consensus 335 dsr~~~svSs~~~~~v~~l~v 355 (398)
T KOG0771|consen 335 DSRYLASVSSDNEAAVTKLAV 355 (398)
T ss_pred CcCcccccccCCceeEEEEee
Confidence 999999999999999887753
|
|
| >KOG1064|consensus | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.3e-12 Score=110.02 Aligned_cols=174 Identities=13% Similarity=0.212 Sum_probs=136.7
Q ss_pred ccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeee-eecCCceEEEEecCCCEEEEEcCCCcEEEE
Q psy7433 4 QCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV-CHDQGASSLVFAPQHQLLISAGKKGDICVI 82 (213)
Q Consensus 4 ~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~v~iw 82 (213)
+.|-..|.++.=+|...+.+|| +.||.|++|... .++.+..+. ..+..|+.+.|+.+|+.+..+..||.+.+|
T Consensus 2205 k~~v~~v~r~~sHp~~~~Yltg---s~dgsv~~~~w~---~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~ 2278 (2439)
T KOG1064|consen 2205 KHPVENVRRMTSHPSDPYYLTG---SQDGSVRMFEWG---HGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLW 2278 (2439)
T ss_pred ecccCceeeecCCCCCceEEec---CCCceEEEEecc---CCCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeec
Confidence 4455678888889999999999 799999999984 333333332 234789999999999999999999999999
Q ss_pred eccCceEEEecccCCCCeeEEEecCCCCEEEEecCC---Ccee------------------eceEEEEEccCCceEEEec
Q psy7433 83 DLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGD---GDIK------------------SPVKCLAIDPHEEFFVTGA 141 (213)
Q Consensus 83 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~---~~i~------------------~~v~~~~~~~~~~~l~~~~ 141 (213)
.+. .++....+.|......+.|-. ..+++++.. +.+. ..++++++-|..++|++|+
T Consensus 2279 q~~-pk~~~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~qllisgg 2355 (2439)
T KOG1064|consen 2279 QAS-PKPYTSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKHQLLISGG 2355 (2439)
T ss_pred ccC-CcceeccccCCccccceeeee--hhhhccccCCCCCcccchhcccCcccceeeeecCCCceEEEEcCcceEEEecC
Confidence 986 556666677887777777764 455555432 2221 7889999999999999999
Q ss_pred CCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCC
Q psy7433 142 GDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 142 ~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 205 (213)
.+|.|++||++..+.+..++. ++...++++++..|.++||++...
T Consensus 2356 r~G~v~l~D~rqrql~h~~~~-------------------~~~~~~f~~~ss~g~ikIw~~s~~ 2400 (2439)
T KOG1064|consen 2356 RKGEVCLFDIRQRQLRHTFQA-------------------LDTREYFVTGSSEGNIKIWRLSEF 2400 (2439)
T ss_pred CcCcEEEeehHHHHHHHHhhh-------------------hhhhheeeccCcccceEEEEcccc
Confidence 999999999998777666643 333457999999999999999876
|
|
| >KOG0974|consensus | Back alignment and domain information |
|---|
Probab=99.43 E-value=4.5e-12 Score=101.57 Aligned_cols=148 Identities=18% Similarity=0.248 Sum_probs=116.8
Q ss_pred EeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEE-ec
Q psy7433 15 FLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRS-RF 93 (213)
Q Consensus 15 ~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~-~~ 93 (213)
++++.-+++++ +.-+.|.+|+.. ...... .+.+|.+.+.++.|+.+|.++++.++|..+++|++++.+... ..
T Consensus 141 ~s~~~~~i~~g---sv~~~iivW~~~--~dn~p~-~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~ 214 (967)
T KOG0974|consen 141 DSAEELYIASG---SVFGEIIVWKPH--EDNKPI-RLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTG 214 (967)
T ss_pred ccCcEEEEEec---cccccEEEEecc--ccCCcc-eecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCccc
Confidence 44566678887 789999999985 222333 678999999999999999999999999999999999886654 33
Q ss_pred ccCCCCeeEEEecCCCCEEEEecCCCceeeceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEec
Q psy7433 94 NAHESPVKCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHI 173 (213)
Q Consensus 94 ~~~~~~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~ 173 (213)
-+|...++.+.+.| + .++++++|-+.++|+. .+..+..+..|.
T Consensus 215 fgHsaRvw~~~~~~-------------------------n--~i~t~gedctcrvW~~-~~~~l~~y~~h~--------- 257 (967)
T KOG0974|consen 215 FGHSARVWACCFLP-------------------------N--RIITVGEDCTCRVWGV-NGTQLEVYDEHS--------- 257 (967)
T ss_pred ccccceeEEEEecc-------------------------c--eeEEeccceEEEEEec-ccceehhhhhhh---------
Confidence 45666666666654 3 6888999999999965 345555777665
Q ss_pred CCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCC
Q psy7433 174 GQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 174 ~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~ 205 (213)
+..|..++..++. .++|++.|+.+++|++...
T Consensus 258 g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~r 290 (967)
T KOG0974|consen 258 GKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNGR 290 (967)
T ss_pred hcceeEEEEcCCceEEEeeccCcchhhhhhhcc
Confidence 3689999999865 5899999999999998754
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=8.7e-11 Score=91.05 Aligned_cols=158 Identities=13% Similarity=0.063 Sum_probs=106.2
Q ss_pred ccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcC---CCcEEEEeccCceEEEecccCCCCeeEEEecCC
Q psy7433 32 KNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGK---KGDICVIDLRQRVIRSRFNAHESPVKCLAIDPH 108 (213)
Q Consensus 32 ~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~ 108 (213)
..|.++|. .+...+.+..+...+...+|+|+|+.|+..+. +..|.+||+.+++.. .+......+...+|+|+
T Consensus 182 ~~l~~~d~----dg~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~-~l~~~~g~~~~~~~SPD 256 (435)
T PRK05137 182 KRLAIMDQ----DGANVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE-LVGNFPGMTFAPRFSPD 256 (435)
T ss_pred eEEEEECC----CCCCcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE-EeecCCCcccCcEECCC
Confidence 47888886 34444556667788999999999998887653 468999999888653 34445667788999999
Q ss_pred CCEEEE-ecCCCc--ee----------------eceEEEEEccCCceEEEecC-CC--cEEEEEccCCeeeeeecCCCCc
Q psy7433 109 EEFFVT-GAGDGD--IK----------------SPVKCLAIDPHEEFFVTGAG-DG--DIKVWSLSGNHLLYNFPGEHAR 166 (213)
Q Consensus 109 ~~~l~~-~~~~~~--i~----------------~~v~~~~~~~~~~~l~~~~~-dg--~i~v~d~~~~~~~~~~~~~~~~ 166 (213)
++.++. .+.++. +. .......|+|||+.|+..+. +| .|+++|+..++.. .+....
T Consensus 257 G~~la~~~~~~g~~~Iy~~d~~~~~~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~-~lt~~~-- 333 (435)
T PRK05137 257 GRKVVMSLSQGGNTDIYTMDLRSGTTTRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPR-RISFGG-- 333 (435)
T ss_pred CCEEEEEEecCCCceEEEEECCCCceEEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeE-EeecCC--
Confidence 998764 444443 22 33556899999998776653 33 5777787654432 222211
Q ss_pred eeEEEecCCCeEEEEeCCCC-eEEEEecC---CcEEEEeCCCC
Q psy7433 167 SSFFKHIGQGVTQLHVDGGS-RLFSCGAD---GSMKVRQLPDR 205 (213)
Q Consensus 167 ~~~~~~~~~~v~~~~~~~~~-~l~s~~~d---~~i~iw~~~~~ 205 (213)
..+....|+|++ .|+..+.+ ..|.+||+..+
T Consensus 334 --------~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~ 368 (435)
T PRK05137 334 --------GRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGS 368 (435)
T ss_pred --------CcccCeEECCCCCEEEEEEcCCCceEEEEEECCCC
Confidence 345667899976 45554433 36778887544
|
|
| >KOG3881|consensus | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.1e-11 Score=89.66 Aligned_cols=148 Identities=15% Similarity=0.245 Sum_probs=113.5
Q ss_pred ceEEEEEeCCCC-eEEEeeccCCC--ccEEEEeCCCcccccceeeeee---------ecCCceEEEEecC--CCEEEEEc
Q psy7433 9 ITSDFVFLGSCS-LVATAGHSSES--KNVCLWDSLLPQKKALVQAFVC---------HDQGASSLVFAPQ--HQLLISAG 74 (213)
Q Consensus 9 ~v~~~~~~~~~~-~l~~~g~~s~~--~~i~iwd~~~~~~~~~~~~~~~---------~~~~v~~~~~~~~--~~~l~~~~ 74 (213)
.+..+.-.|... ++|+|| .. ..+.+||++ ..+.+.+-+. -+-.++++.|-+. ...|+++.
T Consensus 150 g~~~~r~~~~~p~Iva~GG---ke~~n~lkiwdle---~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T 223 (412)
T KOG3881|consen 150 GLYDVRQTDTDPYIVATGG---KENINELKIWDLE---QSKQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATIT 223 (412)
T ss_pred ceeeeccCCCCCceEecCc---hhcccceeeeecc---cceeeeeccCCCCccccceeeeeeccceecCCCCCceEEEEe
Confidence 344455455444 455564 55 789999984 2222222111 1234678889886 78999999
Q ss_pred CCCcEEEEeccCc-eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee------------------eceEEEEEccCCc
Q psy7433 75 KKGDICVIDLRQR-VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------SPVKCLAIDPHEE 135 (213)
Q Consensus 75 ~d~~v~iwd~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------~~v~~~~~~~~~~ 135 (213)
.-+.+++||.+.+ +++.++.-...+++++...|++++++++...+.+. +.|+++..+|.++
T Consensus 224 ~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~ 303 (412)
T KOG3881|consen 224 RYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHP 303 (412)
T ss_pred cceeEEEecCcccCcceeEeccccCcceeeeecCCCcEEEEecccchhheecccCceeeccccCCccCCcceEEEcCCCc
Confidence 9999999999875 67788887888999999999999999999888764 8899999999999
Q ss_pred eEEEecCCCcEEEEEccCCeeeeeecC
Q psy7433 136 FFVTGAGDGDIKVWSLSGNHLLYNFPG 162 (213)
Q Consensus 136 ~l~~~~~dg~i~v~d~~~~~~~~~~~~ 162 (213)
++++++-|..++|+|+++.+.+.....
T Consensus 304 ~las~GLDRyvRIhD~ktrkll~kvYv 330 (412)
T KOG3881|consen 304 VLASCGLDRYVRIHDIKTRKLLHKVYV 330 (412)
T ss_pred eEEeeccceeEEEeecccchhhhhhhh
Confidence 999999999999999998666655443
|
|
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=7.6e-11 Score=91.45 Aligned_cols=181 Identities=13% Similarity=0.142 Sum_probs=107.8
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEE-EcCCCc--EEEEe
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLIS-AGKKGD--ICVID 83 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~--v~iwd 83 (213)
...+.+..|+|||+.|+..........|.+||+.. ++. ..+..........+|+|+|+.|+. .+.++. |.++|
T Consensus 217 ~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~t---g~~-~~lt~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~d 292 (448)
T PRK04792 217 PEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYT---QVR-EKVTSFPGINGAPRFSPDGKKLALVLSKDGQPEIYVVD 292 (448)
T ss_pred CCcccCceECCCCCEEEEEEecCCCcEEEEEECCC---CCe-EEecCCCCCcCCeeECCCCCEEEEEEeCCCCeEEEEEE
Confidence 45677889999999988763211223588888742 222 122222333457899999997765 455564 77788
Q ss_pred ccCceEEEecccCCCCeeEEEecCCCCEEEEecCC-Cc--ee----------------eceEEEEEccCCceEEEecC-C
Q psy7433 84 LRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGD-GD--IK----------------SPVKCLAIDPHEEFFVTGAG-D 143 (213)
Q Consensus 84 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~-~~--i~----------------~~v~~~~~~~~~~~l~~~~~-d 143 (213)
+.+++.. .+..+.......+|+|+++.++..+.. +. +. ......+|+|+|++++..+. +
T Consensus 293 l~tg~~~-~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~Lt~~g~~~~~~~~SpDG~~l~~~~~~~ 371 (448)
T PRK04792 293 IATKALT-RITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSRLTFEGEQNLGGSITPDGRSMIMVNRTN 371 (448)
T ss_pred CCCCCeE-ECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEEecCCCCCcCeeECCCCCEEEEEEecC
Confidence 8877643 344444556788999999988766542 22 21 11234689999998776654 3
Q ss_pred C--cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-E-EEEecCCc--EEEEeCCC
Q psy7433 144 G--DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-L-FSCGADGS--MKVRQLPD 204 (213)
Q Consensus 144 g--~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l-~s~~~d~~--i~iw~~~~ 204 (213)
+ .|.++|+.+++.. .+.... ......|+|++. | ++...++. +.+++...
T Consensus 372 g~~~I~~~dl~~g~~~-~lt~~~-----------~d~~ps~spdG~~I~~~~~~~g~~~l~~~~~~G 426 (448)
T PRK04792 372 GKFNIARQDLETGAMQ-VLTSTR-----------LDESPSVAPNGTMVIYSTTYQGKQVLAAVSIDG 426 (448)
T ss_pred CceEEEEEECCCCCeE-EccCCC-----------CCCCceECCCCCEEEEEEecCCceEEEEEECCC
Confidence 4 4555677666542 222211 112336888764 4 34444443 66667643
|
|
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=7.4e-11 Score=91.13 Aligned_cols=159 Identities=13% Similarity=0.090 Sum_probs=102.7
Q ss_pred ccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCC---CcEEEEeccCceEEEecccCCCCeeEEEecCC
Q psy7433 32 KNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKK---GDICVIDLRQRVIRSRFNAHESPVKCLAIDPH 108 (213)
Q Consensus 32 ~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~ 108 (213)
..|.++|. .+...+.+..+...+.+.+|+|+|+.|+..+.+ ..|.+||+.+++... +..........+|+|+
T Consensus 176 ~~L~~~D~----dG~~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~-l~~~~g~~~~~~~SPD 250 (427)
T PRK02889 176 YQLQISDA----DGQNAQSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRV-VANFKGSNSAPAWSPD 250 (427)
T ss_pred cEEEEECC----CCCCceEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEE-eecCCCCccceEECCC
Confidence 45667775 333444455567789999999999998876643 459999999886543 3334455678999999
Q ss_pred CCEEEE-ecCCCcee------------------eceEEEEEccCCceEEEecC-CCcEEEEEcc--CCeeeeeecCCCCc
Q psy7433 109 EEFFVT-GAGDGDIK------------------SPVKCLAIDPHEEFFVTGAG-DGDIKVWSLS--GNHLLYNFPGEHAR 166 (213)
Q Consensus 109 ~~~l~~-~~~~~~i~------------------~~v~~~~~~~~~~~l~~~~~-dg~i~v~d~~--~~~~~~~~~~~~~~ 166 (213)
++.++. .+.++... .......|+|||+.|+..+. +|...+|.+. .+.. ..+....
T Consensus 251 G~~la~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~-~~lt~~g-- 327 (427)
T PRK02889 251 GRTLAVALSRDGNSQIYTVNADGSGLRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAA-QRVTFTG-- 327 (427)
T ss_pred CCEEEEEEccCCCceEEEEECCCCCcEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCce-EEEecCC--
Confidence 998874 45555422 23456889999998776554 4666676653 3322 1121111
Q ss_pred eeEEEecCCCeEEEEeCCCC-eEEEEecCC---cEEEEeCCCCc
Q psy7433 167 SSFFKHIGQGVTQLHVDGGS-RLFSCGADG---SMKVRQLPDRD 206 (213)
Q Consensus 167 ~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~---~i~iw~~~~~~ 206 (213)
.......|+|++ +++..+.++ .|.+||+.+++
T Consensus 328 --------~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~ 363 (427)
T PRK02889 328 --------SYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQ 363 (427)
T ss_pred --------CCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCC
Confidence 233457899976 465555443 69999998764
|
|
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.2e-10 Score=89.80 Aligned_cols=185 Identities=15% Similarity=0.088 Sum_probs=109.6
Q ss_pred cCceEEEEEeCCCCe--EEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcC-CC----cE
Q psy7433 7 NKITSDFVFLGSCSL--VATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGK-KG----DI 79 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~--l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~----~v 79 (213)
.....+-+|+|||+. ++...+......|.+.++..+ ....+ ....+.....+|+|||+.|+..+. +| .+
T Consensus 184 ~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g-~~~~l---t~~~g~~~~p~wSPDG~~Laf~s~~~g~~di~~ 259 (428)
T PRK01029 184 HSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENP-AGKKI---LALQGNQLMPTFSPRKKLLAFISDRYGNPDLFI 259 (428)
T ss_pred CCCcccceEccCCCceEEEEEEccCCCceEEEEECCCC-CceEe---ecCCCCccceEECCCCCEEEEEECCCCCcceeE
Confidence 345667799999975 322221012345777787422 22222 223444567899999988876542 22 34
Q ss_pred EEEeccCc---eEEEecccCCCCeeEEEecCCCCEEEEecC-CCc--ee------------------eceEEEEEccCCc
Q psy7433 80 CVIDLRQR---VIRSRFNAHESPVKCLAIDPHEEFFVTGAG-DGD--IK------------------SPVKCLAIDPHEE 135 (213)
Q Consensus 80 ~iwd~~~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-~~~--i~------------------~~v~~~~~~~~~~ 135 (213)
..|++..+ +..+............+|+|||+.|+..+. ++. +. ..+....|+|||+
T Consensus 260 ~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~ 339 (428)
T PRK01029 260 QSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDGK 339 (428)
T ss_pred EEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEeccCCCCccceeECCCCC
Confidence 44676652 333333222234467899999998776553 332 21 2345688999999
Q ss_pred eEEEecCC---CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EE-EEec--CCcEEEEeCCCCc
Q psy7433 136 FFVTGAGD---GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LF-SCGA--DGSMKVRQLPDRD 206 (213)
Q Consensus 136 ~l~~~~~d---g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~-s~~~--d~~i~iw~~~~~~ 206 (213)
.|+..+.+ ..|.+||+.+++....... . ..+....|+|++. |+ +... ...|.++|+..++
T Consensus 340 ~Laf~~~~~g~~~I~v~dl~~g~~~~Lt~~-~----------~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~ 406 (428)
T PRK01029 340 KIAFCSVIKGVRQICVYDLATGRDYQLTTS-P----------ENKESPSWAIDSLHLVYSAGNSNESELYLISLITKK 406 (428)
T ss_pred EEEEEEcCCCCcEEEEEECCCCCeEEccCC-C----------CCccceEECCCCCEEEEEECCCCCceEEEEECCCCC
Confidence 88766543 3689999987765432222 1 3456788999764 44 3332 3468888887654
|
|
| >KOG1354|consensus | Back alignment and domain information |
|---|
Probab=99.41 E-value=4.2e-12 Score=90.73 Aligned_cols=197 Identities=14% Similarity=0.194 Sum_probs=134.4
Q ss_pred cCceEEEEEeCCCC--eEEEeeccCCCccEEEEeCCCccccc------------ceeee---------------------
Q psy7433 7 NKITSDFVFLGSCS--LVATAGHSSESKNVCLWDSLLPQKKA------------LVQAF--------------------- 51 (213)
Q Consensus 7 ~~~v~~~~~~~~~~--~l~~~g~~s~~~~i~iwd~~~~~~~~------------~~~~~--------------------- 51 (213)
...|..++|.++++ .+... ..|.+|++|.+....... .+..+
T Consensus 84 eEKinkIrw~~~~n~a~FLls---tNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~a 160 (433)
T KOG1354|consen 84 EEKINKIRWLDDGNLAEFLLS---TNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYA 160 (433)
T ss_pred hhhhhhceecCCCCccEEEEe---cCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeecc
Confidence 35788999998654 34444 389999999874311111 00000
Q ss_pred eeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCc-eE--EEeccc-----CCCCeeEEEecC-CCCEEEEecCCCcee
Q psy7433 52 VCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR-VI--RSRFNA-----HESPVKCLAIDP-HEEFFVTGAGDGDIK 122 (213)
Q Consensus 52 ~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~-~~--~~~~~~-----~~~~i~~~~~~~-~~~~l~~~~~~~~i~ 122 (213)
.+|.-.|+++.++.|+..++++ +|-.|.+|+++-. +. +.-++. ....|++..|+| ..+.|+-.+..|.|+
T Consensus 161 NaHtyhiNSIS~NsD~Et~lSA-DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIr 239 (433)
T KOG1354|consen 161 NAHTYHINSISVNSDKETFLSA-DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIR 239 (433)
T ss_pred ccceeEeeeeeecCccceEeec-cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEE
Confidence 1466678999999999988887 5789999998632 11 111222 234688899999 567888899999987
Q ss_pred ---------------------------------eceEEEEEccCCceEEEecCCCcEEEEEc-cCCeeeeeecCCCCcee
Q psy7433 123 ---------------------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSL-SGNHLLYNFPGEHARSS 168 (213)
Q Consensus 123 ---------------------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~-~~~~~~~~~~~~~~~~~ 168 (213)
..|..+.|+++|+|+++-+.- +|++||+ ...+++.+++.|.....
T Consensus 240 LcDmR~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRDyl-tvk~wD~nme~~pv~t~~vh~~lr~ 318 (433)
T KOG1354|consen 240 LCDMRQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDYL-TVKLWDLNMEAKPVETYPVHEYLRS 318 (433)
T ss_pred EeechhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEeccc-eeEEEeccccCCcceEEeehHhHHH
Confidence 789999999999999987654 8999999 56777777777642211
Q ss_pred EE----Ee-cCCCeEEEEeCC-CCeEEEEecCCcEEEEeCCCCccc
Q psy7433 169 FF----KH-IGQGVTQLHVDG-GSRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 169 ~~----~~-~~~~v~~~~~~~-~~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
.. .. .--.-..++|+. +.+++||+..+.+++++...+.+.
T Consensus 319 kLc~lYEnD~IfdKFec~~sg~~~~v~TGsy~n~frvf~~~~gsk~ 364 (433)
T KOG1354|consen 319 KLCSLYENDAIFDKFECSWSGNDSYVMTGSYNNVFRVFNLARGSKE 364 (433)
T ss_pred HHHHHhhccchhheeEEEEcCCcceEecccccceEEEecCCCCcce
Confidence 00 00 001123456775 457999999999999997766543
|
|
| >KOG4547|consensus | Back alignment and domain information |
|---|
Probab=99.40 E-value=6.4e-11 Score=89.88 Aligned_cols=170 Identities=18% Similarity=0.275 Sum_probs=130.1
Q ss_pred CCCCeEEEeeccCCCccEEEEeCCCcccccceeeee---eecCCceEEEEe------c--------------CCCEEEEE
Q psy7433 17 GSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV---CHDQGASSLVFA------P--------------QHQLLISA 73 (213)
Q Consensus 17 ~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~---~~~~~v~~~~~~------~--------------~~~~l~~~ 73 (213)
|...++|.. +.||.+++|+.. ..+....+. .-.+..++.+|. | +-..++-|
T Consensus 3 ~~~~~~A~~---~~~g~l~iw~t~---~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlg 76 (541)
T KOG4547|consen 3 PALDYFALS---TGDGRLRIWDTA---KNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLG 76 (541)
T ss_pred chhheEeec---CCCCeEEEEEcc---CceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEee
Confidence 456788888 799999999984 333333222 122334444442 1 12256778
Q ss_pred cCCCcEEEEeccCceEEEecc--cCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCC
Q psy7433 74 GKKGDICVIDLRQRVIRSRFN--AHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHE 134 (213)
Q Consensus 74 ~~d~~v~iwd~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~ 134 (213)
...|.|.+|++..++....+. .|.+.+.++.++.+-..|.+++.|..+. ..+.+++.+||+
T Consensus 77 t~~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D~ 156 (541)
T KOG4547|consen 77 TPQGSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCISPDG 156 (541)
T ss_pred cCCccEEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccceEEEcCCC
Confidence 888999999999998887775 5888999999999989999999998775 678889999999
Q ss_pred ceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCC------Ce-EEEEecCCcEEEEeCCC
Q psy7433 135 EFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG------SR-LFSCGADGSMKVRQLPD 204 (213)
Q Consensus 135 ~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------~~-l~s~~~d~~i~iw~~~~ 204 (213)
+.+++++ +.|++||+++.+.+..+.+|. ++|.++.|... .+ |.+...+.-+.+|-+..
T Consensus 157 ~~l~~as--~~ik~~~~~~kevv~~ftgh~----------s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~ 221 (541)
T KOG4547|consen 157 KILLTAS--RQIKVLDIETKEVVITFTGHG----------SPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEK 221 (541)
T ss_pred CEEEecc--ceEEEEEccCceEEEEecCCC----------cceEEEEEEEeccccccceeeeccccccceeEEEEEc
Confidence 9999886 589999999999999999997 78999988643 34 44555677788887765
|
|
| >KOG4190|consensus | Back alignment and domain information |
|---|
Probab=99.39 E-value=5.2e-13 Score=101.12 Aligned_cols=188 Identities=14% Similarity=0.211 Sum_probs=131.7
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCc----ccccceeeeeeecCCceEEEEecCCCEEEEEcCCC
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLP----QKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKG 77 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 77 (213)
.+.||+..|++++--.+.+.++++ +.|.+|++|.++.. .+..+..+++.|..+|..+.|-.+.++++++ ||
T Consensus 730 nf~GH~~~iRai~AidNENSFiSA---SkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~Sc--D~ 804 (1034)
T KOG4190|consen 730 NFTGHQEKIRAIAAIDNENSFISA---SKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASC--DG 804 (1034)
T ss_pred cccCcHHHhHHHHhcccccceeec---cCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeec--cC
Confidence 467899999999877788888888 89999999998532 2234677788999999999999988888876 78
Q ss_pred cEEEEeccCceEEEeccc--CCCCeeEEEecC--CCCEEEEe-cCCCcee----------------------eceEEEEE
Q psy7433 78 DICVIDLRQRVIRSRFNA--HESPVKCLAIDP--HEEFFVTG-AGDGDIK----------------------SPVKCLAI 130 (213)
Q Consensus 78 ~v~iwd~~~~~~~~~~~~--~~~~i~~~~~~~--~~~~l~~~-~~~~~i~----------------------~~v~~~~~ 130 (213)
.|.+||.--++++.++.. ..+.+..+..-| +...++.+ +...+++ ..+.+++.
T Consensus 805 giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaV 884 (1034)
T KOG4190|consen 805 GIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAV 884 (1034)
T ss_pred cceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEEEe
Confidence 999999877766654432 122233333333 23333333 5555554 56789999
Q ss_pred ccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEE-EeCCC
Q psy7433 131 DPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKV-RQLPD 204 (213)
Q Consensus 131 ~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~i-w~~~~ 204 (213)
.+.|++++++-.+|+|.+.|.|+++.+..++... .....++--.+..|+....|.++.+ |...+
T Consensus 885 a~~GN~lAa~LSnGci~~LDaR~G~vINswrpme----------cdllqlaapsdq~L~~saldHslaVnWhald 949 (1034)
T KOG4190|consen 885 ADKGNKLAAALSNGCIAILDARNGKVINSWRPME----------CDLLQLAAPSDQALAQSALDHSLAVNWHALD 949 (1034)
T ss_pred ccCcchhhHHhcCCcEEEEecCCCceeccCCccc----------chhhhhcCchhHHHHhhcccceeEeeehhcC
Confidence 9999999999999999999999999988876543 1222222222334555555666665 54433
|
|
| >KOG0974|consensus | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.3e-10 Score=93.42 Aligned_cols=111 Identities=17% Similarity=0.225 Sum_probs=93.6
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCccccccee-eeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQ-AFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
+.||.+.|.++.++.||+++++. |.|.++++|+++ +.+... ..-+|...+..++|+|+ ++++++.|.+.++
T Consensus 171 l~GHeG~iF~i~~s~dg~~i~s~---SdDRsiRlW~i~---s~~~~~~~~fgHsaRvw~~~~~~n--~i~t~gedctcrv 242 (967)
T KOG0974|consen 171 LKGHEGSIFSIVTSLDGRYIASV---SDDRSIRLWPID---SREVLGCTGFGHSARVWACCFLPN--RIITVGEDCTCRV 242 (967)
T ss_pred ecccCCceEEEEEccCCcEEEEE---ecCcceeeeecc---cccccCcccccccceeEEEEeccc--eeEEeccceEEEE
Confidence 67999999999999999999999 899999999994 343333 55679999999999998 8999999999999
Q ss_pred EeccCceEEEecccCCC-CeeEEEecCCCCEEEEecCCCcee
Q psy7433 82 IDLRQRVIRSRFNAHES-PVKCLAIDPHEEFFVTGAGDGDIK 122 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~~~~~i~ 122 (213)
|+.. +..+..+..|.. .++.++..+.....++++.|+.++
T Consensus 243 W~~~-~~~l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk 283 (967)
T KOG0974|consen 243 WGVN-GTQLEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLK 283 (967)
T ss_pred Eecc-cceehhhhhhhhcceeEEEEcCCceEEEeeccCcchh
Confidence 9765 444446666644 688999999888999999999875
|
|
| >KOG2315|consensus | Back alignment and domain information |
|---|
Probab=99.36 E-value=5.3e-10 Score=84.67 Aligned_cols=187 Identities=13% Similarity=0.203 Sum_probs=122.9
Q ss_pred ccCceEEEEEeCCC--CeEEEe--eccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCE-EE--EEcCC--
Q psy7433 6 HNKITSDFVFLGSC--SLVATA--GHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQL-LI--SAGKK-- 76 (213)
Q Consensus 6 h~~~v~~~~~~~~~--~~l~~~--g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~--~~~~d-- 76 (213)
|...|..+.++|.+ ..+|+- +..+.-+.|+||..........+..-.-....=..+.|++.|+- |+ +..-|
T Consensus 164 ~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~~~a~ksFFkadkvqm~WN~~gt~LLvLastdVDkt 243 (566)
T KOG2315|consen 164 SVSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQHQPVANKSFFKADKVQMKWNKLGTALLVLASTDVDKT 243 (566)
T ss_pred eccceeeEEecCCCCCceEEEEccCCCCCCcEEEEeccccccccchhhhccccccceeEEEeccCCceEEEEEEEeecCC
Confidence 56789999999863 344432 11134568999987321111221111111223346788886652 22 22223
Q ss_pred -------CcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCC-----------Ccee-----eceEEEEEccC
Q psy7433 77 -------GDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGD-----------GDIK-----SPVKCLAIDPH 133 (213)
Q Consensus 77 -------~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~-----------~~i~-----~~v~~~~~~~~ 133 (213)
.++++.++........+. ..++|.++.|+|+++.|+++-.- +.+. ++-+++-|+|.
T Consensus 244 n~SYYGEq~Lyll~t~g~s~~V~L~-k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~~~v~df~egpRN~~~fnp~ 322 (566)
T KOG2315|consen 244 NASYYGEQTLYLLATQGESVSVPLL-KEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRGKPVFDFPEGPRNTAFFNPH 322 (566)
T ss_pred CccccccceEEEEEecCceEEEecC-CCCCceEEEECCCCCEEEEEEecccceEEEEcCCCCEeEeCCCCCccceEECCC
Confidence 358888877445554544 57899999999999888765431 1111 67788999999
Q ss_pred CceEEEecCC---CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEec------CCcEEEEeCC
Q psy7433 134 EEFFVTGAGD---GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGA------DGSMKVRQLP 203 (213)
Q Consensus 134 ~~~l~~~~~d---g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~------d~~i~iw~~~ 203 (213)
|++++.++-+ |.|.|||+.+.+++..+... ..+-+.|+|++ +++|+.. |+.++||++.
T Consensus 323 g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a~------------~tt~~eW~PdGe~flTATTaPRlrvdNg~Kiwhyt 390 (566)
T KOG2315|consen 323 GNIILLAGFGNLPGDMEVWDVPNRKLIAKFKAA------------NTTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYT 390 (566)
T ss_pred CCEEEEeecCCCCCceEEEeccchhhccccccC------------CceEEEEcCCCcEEEEEeccccEEecCCeEEEEec
Confidence 9988777643 89999999999999888874 35668999976 4666543 8999999997
Q ss_pred CC
Q psy7433 204 DR 205 (213)
Q Consensus 204 ~~ 205 (213)
..
T Consensus 391 G~ 392 (566)
T KOG2315|consen 391 GS 392 (566)
T ss_pred Cc
Confidence 65
|
|
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.8e-10 Score=89.18 Aligned_cols=159 Identities=14% Similarity=0.072 Sum_probs=103.0
Q ss_pred ccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCC---CcEEEEeccCceEEEecccCCCCeeEEEecCC
Q psy7433 32 KNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKK---GDICVIDLRQRVIRSRFNAHESPVKCLAIDPH 108 (213)
Q Consensus 32 ~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~ 108 (213)
..|.+||.. +...+.+..+...+...+|+|+|+.|+..+.+ ..|.+||+.+++... +..........+|+|+
T Consensus 184 ~~l~i~D~~----g~~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~-l~~~~g~~~~~~~SpD 258 (433)
T PRK04922 184 YALQVADSD----GYNPQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQREL-VASFRGINGAPSFSPD 258 (433)
T ss_pred EEEEEECCC----CCCceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEE-eccCCCCccCceECCC
Confidence 468889862 33344455567789999999999998877643 469999998876533 3333445568899999
Q ss_pred CCEEEE-ecCCCc--ee----------------eceEEEEEccCCceEEEecC-CCc--EEEEEccCCeeeeeecCCCCc
Q psy7433 109 EEFFVT-GAGDGD--IK----------------SPVKCLAIDPHEEFFVTGAG-DGD--IKVWSLSGNHLLYNFPGEHAR 166 (213)
Q Consensus 109 ~~~l~~-~~~~~~--i~----------------~~v~~~~~~~~~~~l~~~~~-dg~--i~v~d~~~~~~~~~~~~~~~~ 166 (213)
++.++. .+.++. +. ......+|+|||+.|+..+. +|. |.++|+.+++.. .+....
T Consensus 259 G~~l~~~~s~~g~~~Iy~~d~~~g~~~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~-~lt~~g-- 335 (433)
T PRK04922 259 GRRLALTLSRDGNPEIYVMDLGSRQLTRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAE-RLTFQG-- 335 (433)
T ss_pred CCEEEEEEeCCCCceEEEEECCCCCeEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeE-EeecCC--
Confidence 997764 344442 32 23356899999998776653 444 666666554432 221111
Q ss_pred eeEEEecCCCeEEEEeCCCCe-EEEEecC-C--cEEEEeCCCCc
Q psy7433 167 SSFFKHIGQGVTQLHVDGGSR-LFSCGAD-G--SMKVRQLPDRD 206 (213)
Q Consensus 167 ~~~~~~~~~~v~~~~~~~~~~-l~s~~~d-~--~i~iw~~~~~~ 206 (213)
......+|+|++. ++..+.+ + .|.+||+.+++
T Consensus 336 --------~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~ 371 (433)
T PRK04922 336 --------NYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGS 371 (433)
T ss_pred --------CCccCEEECCCCCEEEEEECCCCceeEEEEECCCCC
Confidence 2345689999764 5544333 2 68999987664
|
|
| >KOG1064|consensus | Back alignment and domain information |
|---|
Probab=99.33 E-value=3e-12 Score=107.81 Aligned_cols=152 Identities=57% Similarity=1.104 Sum_probs=122.3
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEE
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVI 82 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iw 82 (213)
.+.|+....+++|-. ..+++.|.++.++.+.+||...+.....+. ..|.+.++++++-|..+.|++|+.+|.|++|
T Consensus 2288 ~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s~v~--~~H~~gaT~l~~~P~~qllisggr~G~v~l~ 2363 (2439)
T KOG1064|consen 2288 WQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNSLVH--TCHDGGATVLAYAPKHQLLISGGRKGEVCLF 2363 (2439)
T ss_pred cccCCccccceeeee--hhhhccccCCCCCcccchhcccCcccceee--eecCCCceEEEEcCcceEEEecCCcCcEEEe
Confidence 467888888888875 789999887889999999985444444454 7899999999999999999999999999999
Q ss_pred eccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCceeeceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecC
Q psy7433 83 DLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPG 162 (213)
Q Consensus 83 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~ 162 (213)
|++..+.++.++. +. ...++++|+..|.++||++.....+.+++.
T Consensus 2364 D~rqrql~h~~~~---------~~--------------------------~~~~f~~~ss~g~ikIw~~s~~~ll~~~p~ 2408 (2439)
T KOG1064|consen 2364 DIRQRQLRHTFQA---------LD--------------------------TREYFVTGSSEGNIKIWRLSEFGLLHTFPS 2408 (2439)
T ss_pred ehHHHHHHHHhhh---------hh--------------------------hhheeeccCcccceEEEEccccchhhcCch
Confidence 9998887777653 11 136899999999999999999888888887
Q ss_pred CCCceeEEEecCCCeEEEEeCCCCeEEEEecCCc
Q psy7433 163 EHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGS 196 (213)
Q Consensus 163 ~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~ 196 (213)
.+....++...+ ..+...+.++|.+++.||.
T Consensus 2409 e~ak~gfFr~~g---~Q~~v~~~nrifsCgad~~ 2439 (2439)
T KOG1064|consen 2409 EHAKQGFFRNIG---MQINVGQCNRIFSCGADGT 2439 (2439)
T ss_pred hhcccchhhhcC---ceeeeccCceEEEecCCCC
Confidence 765555555544 4455566789999999874
|
|
| >KOG0280|consensus | Back alignment and domain information |
|---|
Probab=99.32 E-value=6.1e-11 Score=83.14 Aligned_cols=157 Identities=18% Similarity=0.204 Sum_probs=109.6
Q ss_pred eEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec-CCCEEEEEcCCCcEEEEeccCc-
Q psy7433 10 TSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP-QHQLLISAGKKGDICVIDLRQR- 87 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~iwd~~~~- 87 (213)
..++.|++.+..++++ ..+|.+.+-+... ...+.++.++.|.-++...+|+. +.+++++|++|+.+..||++..
T Consensus 124 ~lslD~~~~~~~i~vs---~s~G~~~~v~~t~-~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~ 199 (339)
T KOG0280|consen 124 ALSLDISTSGTKIFVS---DSRGSISGVYETE-MVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPK 199 (339)
T ss_pred eeEEEeeccCceEEEE---cCCCcEEEEecce-eeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCc
Confidence 4567889988888888 6888888555321 12234447888999999999986 5578999999999999999933
Q ss_pred eEEEe-cccCCCCeeEEEecCCCCEEEEecCCCceeeceEEEEEccCCceEEEecCCCcEEEEEcc-CCeeeeeecCCCC
Q psy7433 88 VIRSR-FNAHESPVKCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLS-GNHLLYNFPGEHA 165 (213)
Q Consensus 88 ~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~-~~~~~~~~~~~~~ 165 (213)
+.+.. .+.|...|.++.-+|. .+.++++|+.|-.|++||.| -++++..-..
T Consensus 200 ~~i~~n~kvH~~GV~SI~ss~~------------------------~~~~I~TGsYDe~i~~~DtRnm~kPl~~~~v--- 252 (339)
T KOG0280|consen 200 TFIWHNSKVHTSGVVSIYSSPP------------------------KPTYIATGSYDECIRVLDTRNMGKPLFKAKV--- 252 (339)
T ss_pred ceeeecceeeecceEEEecCCC------------------------CCceEEEeccccceeeeehhcccCccccCcc---
Confidence 33322 3346666777766653 35699999999999999998 4566655443
Q ss_pred ceeEEEecCCCeEEEEeCCC--CeEEEEecCCcEEEEeCCCC
Q psy7433 166 RSSFFKHIGQGVTQLHVDGG--SRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 166 ~~~~~~~~~~~v~~~~~~~~--~~l~s~~~d~~i~iw~~~~~ 205 (213)
++.|..+.++|. .+++.+..-+-.+|-++..+
T Consensus 253 --------~GGVWRi~~~p~~~~~lL~~CMh~G~ki~~~~~~ 286 (339)
T KOG0280|consen 253 --------GGGVWRIKHHPEIFHRLLAACMHNGAKILDSSDK 286 (339)
T ss_pred --------ccceEEEEecchhhhHHHHHHHhcCceEEEeccc
Confidence 268999999983 33333333334556555543
|
|
| >COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.32 E-value=3.3e-11 Score=85.38 Aligned_cols=202 Identities=13% Similarity=0.245 Sum_probs=133.2
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcc--cccceeeeeeec------------CCceEEEEecCC--CEE
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQ--KKALVQAFVCHD------------QGASSLVFAPQH--QLL 70 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~--~~~~~~~~~~~~------------~~v~~~~~~~~~--~~l 70 (213)
...|+++.|...|.++++| ...|.|.++.-+... ..+....++.|. ..|..+.|..++ +.+
T Consensus 26 ad~ItaVefd~tg~YlatG---DkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hF 102 (460)
T COG5170 26 ADKITAVEFDETGLYLATG---DKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHF 102 (460)
T ss_pred cceeeEEEeccccceEeec---CCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceE
Confidence 3569999999999999999 788999999864221 123334455554 357888887644 345
Q ss_pred EEEcCCCcEEEEeccCceE-------------------E-----------------------Eec-ccCCCCeeEEEecC
Q psy7433 71 ISAGKKGDICVIDLRQRVI-------------------R-----------------------SRF-NAHESPVKCLAIDP 107 (213)
Q Consensus 71 ~~~~~d~~v~iwd~~~~~~-------------------~-----------------------~~~-~~~~~~i~~~~~~~ 107 (213)
+..+.|.+|++|.+..... + +.+ ..|.--+.+++++.
T Consensus 103 LlstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~Ns 182 (460)
T COG5170 103 LLSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNS 182 (460)
T ss_pred EEecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecC
Confidence 6666889999998854310 0 001 22444567888888
Q ss_pred CCCEEEEecCCCcee-------------------------eceEEEEEccCC-ceEEEecCCCcEEEEEccCCe------
Q psy7433 108 HEEFFVTGAGDGDIK-------------------------SPVKCLAIDPHE-EFFVTGAGDGDIKVWSLSGNH------ 155 (213)
Q Consensus 108 ~~~~l~~~~~~~~i~-------------------------~~v~~~~~~~~~-~~l~~~~~dg~i~v~d~~~~~------ 155 (213)
+...++++..-. |. .-|++..|+|.. ..+...+..|.|++-|+|...
T Consensus 183 D~et~lSaDdLr-INLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~~ 261 (460)
T COG5170 183 DKETLLSADDLR-INLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDNSK 261 (460)
T ss_pred chheeeecccee-eeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhccCch
Confidence 777776654321 11 667888899864 477778889999999998432
Q ss_pred eeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCccccccC
Q psy7433 156 LLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDAVVHTL 212 (213)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~l 212 (213)
.+............+......|..+.|+++++++....=-++++||++..+.++.++
T Consensus 262 klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdyltvkiwDvnm~k~pikTi 318 (460)
T COG5170 262 KLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDYLTVKIWDVNMAKNPIKTI 318 (460)
T ss_pred hhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEeccceEEEEecccccCCceee
Confidence 112221111111122233367899999998876666666799999999888877654
|
|
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.1e-08 Score=77.06 Aligned_cols=184 Identities=14% Similarity=0.210 Sum_probs=117.7
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccc-cceeeee--e--------ecCCceEEEEecCCCEEEEEc-C
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKK-ALVQAFV--C--------HDQGASSLVFAPQHQLLISAG-K 75 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~-~~~~~~~--~--------~~~~v~~~~~~~~~~~l~~~~-~ 75 (213)
.....++++|++++|+++.+ .+|.|.++++...... .....+. + ......++.|+|+++++++.. .
T Consensus 87 ~~p~~i~~~~~g~~l~vany--~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG 164 (345)
T PF10282_consen 87 SSPCHIAVDPDGRFLYVANY--GGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLG 164 (345)
T ss_dssp SCEEEEEECTTSSEEEEEET--TTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETT
T ss_pred CCcEEEEEecCCCEEEEEEc--cCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecC
Confidence 34456889999999999863 6899999999542111 1111111 1 123467899999999888763 2
Q ss_pred CCcEEEEeccCce--E--EEecc-cCCCCeeEEEecCCCCEEEEecCCC-cee---------------------------
Q psy7433 76 KGDICVIDLRQRV--I--RSRFN-AHESPVKCLAIDPHEEFFVTGAGDG-DIK--------------------------- 122 (213)
Q Consensus 76 d~~v~iwd~~~~~--~--~~~~~-~~~~~i~~~~~~~~~~~l~~~~~~~-~i~--------------------------- 122 (213)
...|.+|++.... . ...+. ......+.+.|+|+++++.+..+.. .+.
T Consensus 165 ~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~ 244 (345)
T PF10282_consen 165 ADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGE 244 (345)
T ss_dssp TTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSS
T ss_pred CCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeecccccccc
Confidence 3479999997653 2 12222 2455678999999999877665433 232
Q ss_pred eceEEEEEccCCceEEEec-CCCcEEEEEcc--CC--eeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEe-cCC
Q psy7433 123 SPVKCLAIDPHEEFFVTGA-GDGDIKVWSLS--GN--HLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCG-ADG 195 (213)
Q Consensus 123 ~~v~~~~~~~~~~~l~~~~-~dg~i~v~d~~--~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~-~d~ 195 (213)
.....+.++|||++|.++. ..+.|.+|++. ++ +.+..+... +.....+.++|++ +|+++. .++
T Consensus 245 ~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~----------G~~Pr~~~~s~~g~~l~Va~~~s~ 314 (345)
T PF10282_consen 245 NAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTG----------GKFPRHFAFSPDGRYLYVANQDSN 314 (345)
T ss_dssp SSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEES----------SSSEEEEEE-TTSSEEEEEETTTT
T ss_pred CCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCC----------CCCccEEEEeCCCCEEEEEecCCC
Confidence 2577899999999877765 45789999993 22 222232221 2458899999965 455554 667
Q ss_pred cEEEEeCC
Q psy7433 196 SMKVRQLP 203 (213)
Q Consensus 196 ~i~iw~~~ 203 (213)
.|.+|++.
T Consensus 315 ~v~vf~~d 322 (345)
T PF10282_consen 315 TVSVFDID 322 (345)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEEe
Confidence 99999875
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >KOG0280|consensus | Back alignment and domain information |
|---|
Probab=99.31 E-value=4.4e-10 Score=78.94 Aligned_cols=165 Identities=12% Similarity=0.172 Sum_probs=112.6
Q ss_pred CceEEEEEeC---CCC-eEEEeeccCCCccEEEEeCCCcccccceeeeeeec---CCceEEEEecCCCEEEEEcCCCcEE
Q psy7433 8 KITSDFVFLG---SCS-LVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHD---QGASSLVFAPQHQLLISAGKKGDIC 80 (213)
Q Consensus 8 ~~v~~~~~~~---~~~-~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~~d~~v~ 80 (213)
..+..+.|.- +|. .++-+ ...|.|.++..........++.+.... ....++.|++.+..++++..+|.+.
T Consensus 70 s~~~dm~w~~~~~~g~~~l~~a---~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~~~ 146 (339)
T KOG0280|consen 70 STEFDMLWRIRETDGDFNLLDA---HARGQIQLYRNDEDESSVHLRGLSSKKISVVEALSLDISTSGTKIFVSDSRGSIS 146 (339)
T ss_pred cccceeeeeeccCCccceeeec---cccceEEEEeeccceeeeeecccchhhhhheeeeEEEeeccCceEEEEcCCCcEE
Confidence 4456666653 444 34444 567888888763222222222222211 1345778899898999999999998
Q ss_pred EEeccCc--eEEEecccCCCCeeEEEecCCCCEEEEecCCCceeeceEEEEEccCCceEEEecCCCcEEEEEcc-CCeee
Q psy7433 81 VIDLRQR--VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLS-GNHLL 157 (213)
Q Consensus 81 iwd~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~-~~~~~ 157 (213)
+-+.... +.++..+.|..+++...|+... .+++.+|+.|+.+..||+| .++.+
T Consensus 147 ~v~~t~~~le~vq~wk~He~E~Wta~f~~~~------------------------pnlvytGgDD~~l~~~D~R~p~~~i 202 (339)
T KOG0280|consen 147 GVYETEMVLEKVQTWKVHEFEAWTAKFSDKE------------------------PNLVYTGGDDGSLSCWDIRIPKTFI 202 (339)
T ss_pred EEecceeeeeecccccccceeeeeeecccCC------------------------CceEEecCCCceEEEEEecCCccee
Confidence 6655544 3344778888888888887543 2688999999999999999 33444
Q ss_pred ee-ecCCCCceeEEEecCCCeEEEEeCCC--CeEEEEecCCcEEEEeCCCCcccc
Q psy7433 158 YN-FPGEHARSSFFKHIGQGVTQLHVDGG--SRLFSCGADGSMKVRQLPDRDAVV 209 (213)
Q Consensus 158 ~~-~~~~~~~~~~~~~~~~~v~~~~~~~~--~~l~s~~~d~~i~iw~~~~~~~~~ 209 (213)
.. .+.|. ..|.++.-+|. .++++|++|..|++||.++-.+++
T Consensus 203 ~~n~kvH~----------~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl 247 (339)
T KOG0280|consen 203 WHNSKVHT----------SGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPL 247 (339)
T ss_pred eecceeee----------cceEEEecCCCCCceEEEeccccceeeeehhcccCcc
Confidence 33 33444 67999998873 469999999999999999755554
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=99.31 E-value=1e-09 Score=82.83 Aligned_cols=164 Identities=18% Similarity=0.241 Sum_probs=110.2
Q ss_pred CCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCC
Q psy7433 29 SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPH 108 (213)
Q Consensus 29 s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~ 108 (213)
..++.|.+.|. .+.+.+..+......-..+.|+||++++++++.||.|.++|+.+.+.+.+++. ......++++++
T Consensus 13 ~~~~~v~viD~---~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~-G~~~~~i~~s~D 88 (369)
T PF02239_consen 13 RGSGSVAVIDG---ATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKV-GGNPRGIAVSPD 88 (369)
T ss_dssp GGGTEEEEEET---TT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE--SSEEEEEEE--T
T ss_pred cCCCEEEEEEC---CCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEec-CCCcceEEEcCC
Confidence 57899999998 56777887775444334578999999999999999999999999999988874 445688999999
Q ss_pred CCEEEEecC-CCcee------------------------eceEEEEEccCCceEE-EecCCCcEEEEEccCCeee--eee
Q psy7433 109 EEFFVTGAG-DGDIK------------------------SPVKCLAIDPHEEFFV-TGAGDGDIKVWSLSGNHLL--YNF 160 (213)
Q Consensus 109 ~~~l~~~~~-~~~i~------------------------~~v~~~~~~~~~~~l~-~~~~dg~i~v~d~~~~~~~--~~~ 160 (213)
|++++++.. .+.+. ..+..+.-+|....++ +--+.+.|.+.|....+.+ ..+
T Consensus 89 G~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~~~~i 168 (369)
T PF02239_consen 89 GKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLKVTTI 168 (369)
T ss_dssp TTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEEEEEE
T ss_pred CCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccceeee
Confidence 999888764 44443 2345666777777444 4444577877787654322 233
Q ss_pred cCCCCceeEEEecCCCeEEEEeCCCCe-E-EEEecCCcEEEEeCCCCcc
Q psy7433 161 PGEHARSSFFKHIGQGVTQLHVDGGSR-L-FSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 161 ~~~~~~~~~~~~~~~~v~~~~~~~~~~-l-~s~~~d~~i~iw~~~~~~~ 207 (213)
... .......|+|+++ + ++...++.|-++|..+++.
T Consensus 169 ~~g-----------~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~ 206 (369)
T PF02239_consen 169 KVG-----------RFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKL 206 (369)
T ss_dssp E-------------TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEE
T ss_pred ccc-----------ccccccccCcccceeeecccccceeEEEeeccceE
Confidence 222 4577889999764 3 4445677899999887644
|
... |
| >KOG3914|consensus | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.7e-10 Score=83.94 Aligned_cols=159 Identities=16% Similarity=0.214 Sum_probs=101.0
Q ss_pred eEEEEEeCCCCeEEEeeccCCCccEEEEeCCCccc-ccceeeeeeecCCceEEEEecCCCEEEEEc---CCCcEEEEecc
Q psy7433 10 TSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQK-KALVQAFVCHDQGASSLVFAPQHQLLISAG---KKGDICVIDLR 85 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d~~v~iwd~~ 85 (213)
+..+..+|+++++|.+ ..+....++++....+ .+.+.... -...-+++.|..+......+. +...+.+|...
T Consensus 65 ~~~~~~s~~~~llAv~---~~~K~~~~f~~~~~~~~~kl~~~~~-v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~ 140 (390)
T KOG3914|consen 65 PALVLTSDSGRLVAVA---TSSKQRAVFDYRENPKGAKLLDVSC-VPKRPTAISFIREDTSVLVADKAGDVYSFDILSAD 140 (390)
T ss_pred ccccccCCCceEEEEE---eCCCceEEEEEecCCCcceeeeEee-cccCcceeeeeeccceEEEEeecCCceeeeeeccc
Confidence 3445677889999988 5666666666642222 22222222 223344555555444444433 33444455444
Q ss_pred CceEEEecccCCCCeeEEEecCCCCEEEEecCCCceeeceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecC-CC
Q psy7433 86 QRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPG-EH 164 (213)
Q Consensus 86 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~-~~ 164 (213)
.+.. ..+-+|-..++.++++| |+++++++..|..|++-.......+..+.. |.
T Consensus 141 ~~~~-~~~lGhvSml~dVavS~-------------------------D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~ 194 (390)
T KOG3914|consen 141 SGRC-EPILGHVSMLLDVAVSP-------------------------DDQFIITADRDEKIRVSRYPATFVIESFCLGHK 194 (390)
T ss_pred ccCc-chhhhhhhhhheeeecC-------------------------CCCEEEEecCCceEEEEecCcccchhhhccccH
Confidence 3322 23334555555555555 457888888899999877766666666554 44
Q ss_pred CceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCccc
Q psy7433 165 ARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 165 ~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
.-|..++..++..|+++|.|+++++||+.+++.+
T Consensus 195 ----------eFVS~isl~~~~~LlS~sGD~tlr~Wd~~sgk~L 228 (390)
T KOG3914|consen 195 ----------EFVSTISLTDNYLLLSGSGDKTLRLWDITSGKLL 228 (390)
T ss_pred ----------hheeeeeeccCceeeecCCCCcEEEEecccCCcc
Confidence 6799999998888999999999999999999765
|
|
| >KOG1912|consensus | Back alignment and domain information |
|---|
Probab=99.29 E-value=4.4e-10 Score=88.42 Aligned_cols=188 Identities=15% Similarity=0.229 Sum_probs=142.5
Q ss_pred CccccccCceEEEEEeCC------------CCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec---
Q psy7433 1 MTYQCHNKITSDFVFLGS------------CSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP--- 65 (213)
Q Consensus 1 ~~l~~h~~~v~~~~~~~~------------~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~--- 65 (213)
++++.|+..|+.+.|.|- .-+||++ ...|.|.+||+ .....+..++.+..++..++|-+
T Consensus 49 qsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsa---D~~GrIil~d~---~~~s~~~~l~~~~~~~qdl~W~~~rd 122 (1062)
T KOG1912|consen 49 QSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASA---DISGRIILVDF---VLASVINWLSHSNDSVQDLCWVPARD 122 (1062)
T ss_pred hccccCccceeEEEeccCCCchhccCccccceeEEec---cccCcEEEEEe---hhhhhhhhhcCCCcchhheeeeeccC
Confidence 457789999999999872 1246666 78999999998 56667777888899999999987
Q ss_pred CC-CEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecC-CCCEEEEecCCCcee---------------------
Q psy7433 66 QH-QLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDP-HEEFFVTGAGDGDIK--------------------- 122 (213)
Q Consensus 66 ~~-~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~i~--------------------- 122 (213)
+. ..|++......+.+|+..+|+...+.........|+.+.| +.+.+..-+..|.+.
T Consensus 123 ~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~~l~~sep~~pgk~~qI~s 202 (1062)
T KOG1912|consen 123 DSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHEILSCFRVDPFDSRHFCVLGSKGFVLSCKDLGLSEPDVPGKEFQITS 202 (1062)
T ss_pred cchheeEEecCCcEEEEEEccCCceeeccccCCcceeeeeeCCCCcceEEEEccCceEEEEeccCCCCCCCCceeEEEec
Confidence 33 4677777778999999999999888877777788899998 666666666666543
Q ss_pred ----------------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecC
Q psy7433 123 ----------------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIG 174 (213)
Q Consensus 123 ----------------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~ 174 (213)
.-...++|+|.-+-++-......+.++|++-..++....-+.
T Consensus 203 d~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~lfi~~prellv~dle~~~~l~vvpier---------- 272 (1062)
T KOG1912|consen 203 DHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNILFITFPRELLVFDLEYECCLAVVPIER---------- 272 (1062)
T ss_pred CccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhceEEEEeccceEEEcchhhceeEEEEecc----------
Confidence 112235677776655555567789999998888887776654
Q ss_pred CCeEEEEeCCCC---eEEEEecCCcEEEEeCCC
Q psy7433 175 QGVTQLHVDGGS---RLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 175 ~~v~~~~~~~~~---~l~s~~~d~~i~iw~~~~ 204 (213)
+.+.-+.|-|+. .|+..-.||.+.+|--+.
T Consensus 273 ~~akfv~vlP~~~rd~LfclH~nG~ltirvrk~ 305 (1062)
T KOG1912|consen 273 GGAKFVDVLPDPRRDALFCLHSNGRLTIRVRKE 305 (1062)
T ss_pred CCcceeEeccCCCcceEEEEecCCeEEEEEeec
Confidence 556667777753 388899999999998765
|
|
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=99.28 E-value=4.5e-09 Score=75.72 Aligned_cols=167 Identities=19% Similarity=0.300 Sum_probs=123.8
Q ss_pred EEeCCCCeEEEeec--cCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEc-----------------
Q psy7433 14 VFLGSCSLVATAGH--SSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG----------------- 74 (213)
Q Consensus 14 ~~~~~~~~l~~~g~--~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------------- 74 (213)
.|+|||++|.+.-. .+..|.|-|||.. ...+.+..+..+.-.-..+.+.|+++.|+.+.
T Consensus 57 ~fs~dG~~LytTEnd~~~g~G~IgVyd~~--~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~ 134 (305)
T PF07433_consen 57 VFSPDGRLLYTTENDYETGRGVIGVYDAA--RGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLD 134 (305)
T ss_pred EEcCCCCEEEEeccccCCCcEEEEEEECc--CCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChh
Confidence 68999999998832 1235789999994 36677888888877788999999998877763
Q ss_pred -CCCcEEEEeccCceEEEe--c--ccCCCCeeEEEecCCCCEEEEecCCCcee---------------------------
Q psy7433 75 -KKGDICVIDLRQRVIRSR--F--NAHESPVKCLAIDPHEEFFVTGAGDGDIK--------------------------- 122 (213)
Q Consensus 75 -~d~~v~iwd~~~~~~~~~--~--~~~~~~i~~~~~~~~~~~l~~~~~~~~i~--------------------------- 122 (213)
.+..+.+.|..+|+.+.+ + ..|...+..+++.+++..++..-..+.-.
T Consensus 135 tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g~~~~~~~~p~~~~~~ 214 (305)
T PF07433_consen 135 TMQPSLVYLDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRGGALRLLPAPEEQWRR 214 (305)
T ss_pred hcCCceEEEecCCCceeeeeecCccccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcCCCcceeccCChHHHHh
Confidence 223566778888887766 4 23667899999999987665554444221
Q ss_pred --eceEEEEEccCCceEEEec-CCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecC
Q psy7433 123 --SPVKCLAIDPHEEFFVTGA-GDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGAD 194 (213)
Q Consensus 123 --~~v~~~~~~~~~~~l~~~~-~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d 194 (213)
..+-++++++++.++++.+ .-+.+.+||..+++.+...... .+..++..++++++|.+..
T Consensus 215 l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~~~~~~l~------------D~cGva~~~~~f~~ssG~G 277 (305)
T PF07433_consen 215 LNGYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGRLLGSVPLP------------DACGVAPTDDGFLVSSGQG 277 (305)
T ss_pred hCCceEEEEEeCCCCEEEEECCCCCEEEEEECCCCCEeeccccC------------ceeeeeecCCceEEeCCCc
Confidence 7789999999998776555 5678999999999998887764 4777777777755555443
|
|
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.1e-09 Score=84.51 Aligned_cols=159 Identities=14% Similarity=0.076 Sum_probs=103.7
Q ss_pred CccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCC---CcEEEEeccCceEEEecccCCCCeeEEEecC
Q psy7433 31 SKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKK---GDICVIDLRQRVIRSRFNAHESPVKCLAIDP 107 (213)
Q Consensus 31 ~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~ 107 (213)
...|.++|.. +...+.+..+...+...+|+|+|++|+.+..+ ..|++||+.+++.... ........+++|+|
T Consensus 169 ~~~l~~~d~~----g~~~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~-~~~~~~~~~~~~sp 243 (417)
T TIGR02800 169 RYELQVADYD----GANPQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKV-ASFPGMNGAPAFSP 243 (417)
T ss_pred cceEEEEcCC----CCCCEEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEe-ecCCCCccceEECC
Confidence 3457777762 23334455566678899999999999877543 4799999988754332 33445567789999
Q ss_pred CCCEEEEe-cCCCc--ee----------------eceEEEEEccCCceEEEecC-CC--cEEEEEccCCeeeeeecCCCC
Q psy7433 108 HEEFFVTG-AGDGD--IK----------------SPVKCLAIDPHEEFFVTGAG-DG--DIKVWSLSGNHLLYNFPGEHA 165 (213)
Q Consensus 108 ~~~~l~~~-~~~~~--i~----------------~~v~~~~~~~~~~~l~~~~~-dg--~i~v~d~~~~~~~~~~~~~~~ 165 (213)
+++.|+.. +.++. +. .......|+|+++.|+..+. .+ .|.++|+.+++.. .+..+.
T Consensus 244 Dg~~l~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~-~l~~~~- 321 (417)
T TIGR02800 244 DGSKLAVSLSKDGNPDIYVMDLDGKQLTRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVR-RLTFRG- 321 (417)
T ss_pred CCCEEEEEECCCCCccEEEEECCCCCEEECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEE-EeecCC-
Confidence 99877654 33332 32 22346789999998776554 33 5777777655432 222221
Q ss_pred ceeEEEecCCCeEEEEeCCCC-eEEEEecCC---cEEEEeCCCC
Q psy7433 166 RSSFFKHIGQGVTQLHVDGGS-RLFSCGADG---SMKVRQLPDR 205 (213)
Q Consensus 166 ~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~---~i~iw~~~~~ 205 (213)
..+....|+|++ +++..+.++ .|.+||+.++
T Consensus 322 ---------~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~ 356 (417)
T TIGR02800 322 ---------GYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGG 356 (417)
T ss_pred ---------CCccCeEECCCCCEEEEEEccCCceEEEEEeCCCC
Confidence 456778899865 466666554 7888888764
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >KOG2321|consensus | Back alignment and domain information |
|---|
Probab=99.27 E-value=2e-10 Score=87.30 Aligned_cols=175 Identities=15% Similarity=0.280 Sum_probs=135.4
Q ss_pred EEEEEeC-CCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceE
Q psy7433 11 SDFVFLG-SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVI 89 (213)
Q Consensus 11 ~~~~~~~-~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~ 89 (213)
++++++. +..+++.+ ....|.-+++ +++..+..+....+.++++..++...+|++|+.+|.|-+||.++...
T Consensus 137 RDm~y~~~scDly~~g----sg~evYRlNL---EqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksr 209 (703)
T KOG2321|consen 137 RDMKYHKPSCDLYLVG----SGSEVYRLNL---EQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSR 209 (703)
T ss_pred ccccccCCCccEEEee----cCcceEEEEc---cccccccccccccccceeeeecCccceEEecccCceEEEecchhhhh
Confidence 3455543 44444444 5677888888 67888888887778999999999888999999999999999998765
Q ss_pred EEecc------cCCC-----CeeEEEecCCCCEEEEecCCCcee------------------eceEEEEEccCC--ceEE
Q psy7433 90 RSRFN------AHES-----PVKCLAIDPHEEFFVTGAGDGDIK------------------SPVKCLAIDPHE--EFFV 138 (213)
Q Consensus 90 ~~~~~------~~~~-----~i~~~~~~~~~~~l~~~~~~~~i~------------------~~v~~~~~~~~~--~~l~ 138 (213)
+..+. .+.+ .|+++.|+.+|-.+++|..+|.+. .+|..+.|.+.+ ..++
T Consensus 210 v~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~~q~~v~ 289 (703)
T KOG2321|consen 210 VGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKLDWQDTDQQNKVV 289 (703)
T ss_pred heeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCCccceeeecccccCCCceEE
Confidence 55443 2223 489999999999999999999775 789999998763 3444
Q ss_pred EecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCC-CeEEEEecCCcEEEEeCCC
Q psy7433 139 TGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG-SRLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 139 ~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~d~~i~iw~~~~ 204 (213)
+. ....++|||-.+++....+... ..++.+++-|+ +.++++-.+..+..|=+..
T Consensus 290 S~-Dk~~~kiWd~~~Gk~~asiEpt-----------~~lND~C~~p~sGm~f~Ane~~~m~~yyiP~ 344 (703)
T KOG2321|consen 290 SM-DKRILKIWDECTGKPMASIEPT-----------SDLNDFCFVPGSGMFFTANESSKMHTYYIPS 344 (703)
T ss_pred ec-chHHhhhcccccCCceeecccc-----------CCcCceeeecCCceEEEecCCCcceeEEccc
Confidence 43 4568999999999998888764 46888888885 6788888888877776654
|
|
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.5e-08 Score=75.06 Aligned_cols=192 Identities=12% Similarity=0.115 Sum_probs=123.0
Q ss_pred ceEEEEEeCCCCeEEEeeccC-CCccEEEEeCCCc-ccccceeeeeeecCCceEEEEecCCCEEEEEc-CCCcEEEEecc
Q psy7433 9 ITSDFVFLGSCSLVATAGHSS-ESKNVCLWDSLLP-QKKALVQAFVCHDQGASSLVFAPQHQLLISAG-KKGDICVIDLR 85 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s-~~~~i~iwd~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~iwd~~ 85 (213)
...-++++|++++|.++.+.. .++.|..|++... .....+............++++|++++|+++. .+|.|.++++.
T Consensus 38 ~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~ 117 (345)
T PF10282_consen 38 NPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLD 117 (345)
T ss_dssp SECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEcc
Confidence 345678899999998885422 5789999998532 23344444443445567899999999998886 48999999997
Q ss_pred C-ceEEEe---cc----------cCCCCeeEEEecCCCCEEEEecCCC-cee----------------------eceEEE
Q psy7433 86 Q-RVIRSR---FN----------AHESPVKCLAIDPHEEFFVTGAGDG-DIK----------------------SPVKCL 128 (213)
Q Consensus 86 ~-~~~~~~---~~----------~~~~~i~~~~~~~~~~~l~~~~~~~-~i~----------------------~~v~~~ 128 (213)
. +..... +. .......++.++|+++++++..... .+. ...+.+
T Consensus 118 ~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~ 197 (345)
T PF10282_consen 118 DDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHL 197 (345)
T ss_dssp TTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEE
T ss_pred CCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEE
Confidence 6 332221 11 1234578999999999887764322 221 667889
Q ss_pred EEccCCceEEEec-CCCcEEEEEcc--CCe--eeeeecCCCCceeEEEecCCCeEEEEeCCCCe--EEEEecCCcEEEEe
Q psy7433 129 AIDPHEEFFVTGA-GDGDIKVWSLS--GNH--LLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR--LFSCGADGSMKVRQ 201 (213)
Q Consensus 129 ~~~~~~~~l~~~~-~dg~i~v~d~~--~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--l~s~~~d~~i~iw~ 201 (213)
.|+|+++++.+.. .++.|.++++. ++. .+..+....... ........+.++|+++ +++....+.|.+|+
T Consensus 198 ~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~----~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~ 273 (345)
T PF10282_consen 198 AFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGF----TGENAPAEIAISPDGRFLYVSNRGSNSISVFD 273 (345)
T ss_dssp EE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTS----CSSSSEEEEEE-TTSSEEEEEECTTTEEEEEE
T ss_pred EEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccc----cccCCceeEEEecCCCEEEEEeccCCEEEEEE
Confidence 9999999766554 56789999987 332 222222110000 0012578899999774 44555678999999
Q ss_pred CCC
Q psy7433 202 LPD 204 (213)
Q Consensus 202 ~~~ 204 (213)
+..
T Consensus 274 ~d~ 276 (345)
T PF10282_consen 274 LDP 276 (345)
T ss_dssp ECT
T ss_pred Eec
Confidence 953
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal | Back alignment and domain information |
|---|
Probab=99.27 E-value=2e-08 Score=70.63 Aligned_cols=189 Identities=13% Similarity=0.217 Sum_probs=119.4
Q ss_pred EEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeee---eecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceE
Q psy7433 13 FVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV---CHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVI 89 (213)
Q Consensus 13 ~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~ 89 (213)
++.+++|+.||.. .|..|.|-..++.- ...+...+ .....-+.++||||+..||.+...|.|++||+...+.
T Consensus 3 ~~~~~~Gk~lAi~----qd~~iEiRsa~Ddf-~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~l 77 (282)
T PF15492_consen 3 LALSSDGKLLAIL----QDQCIEIRSAKDDF-SSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMGSEL 77 (282)
T ss_pred eeecCCCcEEEEE----eccEEEEEeccCCc-hheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEeccccee
Confidence 5678899999998 78899888875321 22223322 2233457899999999999999999999999975432
Q ss_pred EEeccc-------CCCCeeEEEecCCC------CEEEEecCCCcee-------------------------eceEEEEEc
Q psy7433 90 RSRFNA-------HESPVKCLAIDPHE------EFFVTGAGDGDIK-------------------------SPVKCLAID 131 (213)
Q Consensus 90 ~~~~~~-------~~~~i~~~~~~~~~------~~l~~~~~~~~i~-------------------------~~v~~~~~~ 131 (213)
. .++. ....|..+.|.+-. ..|++-...|.++ ..|.++.++
T Consensus 78 f-~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~ 156 (282)
T PF15492_consen 78 F-VIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYH 156 (282)
T ss_pred E-EcCcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEc
Confidence 2 2221 12345666665421 1244444444333 689999999
Q ss_pred cCCceEEEecCC-C----------cEEEEEccCCeeeee----ecCCCC------------ceeEE---EecCCCeEEEE
Q psy7433 132 PHEEFFVTGAGD-G----------DIKVWSLSGNHLLYN----FPGEHA------------RSSFF---KHIGQGVTQLH 181 (213)
Q Consensus 132 ~~~~~l~~~~~d-g----------~i~v~d~~~~~~~~~----~~~~~~------------~~~~~---~~~~~~v~~~~ 181 (213)
|..++|++|+.. . -+..|.+-++.+-.. ...... ....+ ......|..|.
T Consensus 157 p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~~~~~d~i~kmS 236 (282)
T PF15492_consen 157 PKHRLLLVGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFKFFSRQGQEQDGIFKMS 236 (282)
T ss_pred CCCCEEEEeccCCCCCccccccccCceEEEEcCCCCcEEEccccCccccccccccceeeccceeeeeccccCCCceEEEE
Confidence 998877776532 1 255666543322111 100000 00011 11346899999
Q ss_pred eCCCC-eEEEEecCCcEEEEeCCCCcc
Q psy7433 182 VDGGS-RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 182 ~~~~~-~l~s~~~d~~i~iw~~~~~~~ 207 (213)
.+|++ .|++...+|.|.+|++.+-+.
T Consensus 237 lSPdg~~La~ih~sG~lsLW~iPsL~~ 263 (282)
T PF15492_consen 237 LSPDGSLLACIHFSGSLSLWEIPSLRL 263 (282)
T ss_pred ECCCCCEEEEEEcCCeEEEEecCcchh
Confidence 99976 589999999999999987643
|
|
| >KOG2314|consensus | Back alignment and domain information |
|---|
Probab=99.27 E-value=4.5e-10 Score=85.21 Aligned_cols=101 Identities=14% Similarity=0.298 Sum_probs=72.4
Q ss_pred EEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcC-----------CCcE
Q psy7433 11 SDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGK-----------KGDI 79 (213)
Q Consensus 11 ~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----------d~~v 79 (213)
+-+.|||.|.+|+|- ...-|.+|-= .....++.+. | ..|.-+.|||+.+||++-+. ...+
T Consensus 214 tyv~wSP~GTYL~t~----Hk~GI~lWGG---~~f~r~~RF~-H-p~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l 284 (698)
T KOG2314|consen 214 TYVRWSPKGTYLVTF----HKQGIALWGG---ESFDRIQRFY-H-PGVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQL 284 (698)
T ss_pred eeEEecCCceEEEEE----eccceeeecC---ccHHHHHhcc-C-CCceeeecCCccceEEEecCCccccCcccCCCceE
Confidence 447899999999998 6677999984 4555665553 4 45899999999999998642 2469
Q ss_pred EEEeccCceEEEecccC--CCCee-EEEecCCCCEEEEecCCCc
Q psy7433 80 CVIDLRQRVIRSRFNAH--ESPVK-CLAIDPHEEFFVTGAGDGD 120 (213)
Q Consensus 80 ~iwd~~~~~~~~~~~~~--~~~i~-~~~~~~~~~~l~~~~~~~~ 120 (213)
+|||+++|...+.|... +..++ -+.||.|++++|.-..++.
T Consensus 285 ~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~~si 328 (698)
T KOG2314|consen 285 IIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTGNSI 328 (698)
T ss_pred EEEEccccchhcceeccCCCccccceEEeccCCceeEEeccceE
Confidence 99999999877766542 22222 3567777777666555543
|
|
| >PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal | Back alignment and domain information |
|---|
Probab=99.24 E-value=2.6e-09 Score=74.99 Aligned_cols=148 Identities=11% Similarity=0.238 Sum_probs=106.5
Q ss_pred eEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeee-------eecCCceEEEEecC------CCEEEEEcCC
Q psy7433 10 TSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV-------CHDQGASSLVFAPQ------HQLLISAGKK 76 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~-------~~~~~v~~~~~~~~------~~~l~~~~~d 76 (213)
=+.++|+||+.+||.+ ...|+|+++|+. +..+..+. .-...|..+.|.+. ...|++...+
T Consensus 46 WRkl~WSpD~tlLa~a---~S~G~i~vfdl~----g~~lf~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~ 118 (282)
T PF15492_consen 46 WRKLAWSPDCTLLAYA---ESTGTIRVFDLM----GSELFVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYR 118 (282)
T ss_pred heEEEECCCCcEEEEE---cCCCeEEEEecc----cceeEEcCcccccCCccccceeeeEeeccccccccceeEEEEecc
Confidence 4678999999999999 789999999983 12222221 12245667777542 2257777788
Q ss_pred CcEEEEeccCc-----eEEEecc---cCCCCeeEEEecCCCCEEEEecCCCce----e----------------------
Q psy7433 77 GDICVIDLRQR-----VIRSRFN---AHESPVKCLAIDPHEEFFVTGAGDGDI----K---------------------- 122 (213)
Q Consensus 77 ~~v~iwd~~~~-----~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~~~~i----~---------------------- 122 (213)
|.++-|-+..+ +....+. .+...|.++.++|..+.|++|+....- +
T Consensus 119 G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~ 198 (282)
T PF15492_consen 119 GQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHRLLLVGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVT 198 (282)
T ss_pred ceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCCCEEEEeccCCCCCccccccccCceEEEEcCCCCcEEEcc
Confidence 88888876322 2233332 246689999999998888877653211 0
Q ss_pred -------------------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCC
Q psy7433 123 -------------------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEH 164 (213)
Q Consensus 123 -------------------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~ 164 (213)
..|..|..||||+.|++...+|.|.+|++.+-+....+..+.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~fs~~~~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W~~~e 271 (282)
T PF15492_consen 199 SSEDDITASSKRRGLLRIPSFKFFSRQGQEQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSWKQDE 271 (282)
T ss_pred ccCccccccccccceeeccceeeeeccccCCCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhcccchhh
Confidence 578899999999999999999999999998877777776654
|
|
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.5e-09 Score=83.70 Aligned_cols=165 Identities=11% Similarity=-0.016 Sum_probs=95.7
Q ss_pred ceEEEEEeCCCCeEEEeecc--CCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEc-CCCcEEEE--e
Q psy7433 9 ITSDFVFLGSCSLVATAGHS--SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG-KKGDICVI--D 83 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~--s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~iw--d 83 (213)
.....+|+|||+.|+..... ..+-.+.+|++.....+.................|+|||+.|+..+ .+|...+| +
T Consensus 232 ~~~~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~ 311 (428)
T PRK01029 232 NQLMPTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQ 311 (428)
T ss_pred CccceEECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEE
Confidence 34567899999998876310 1122344466632111222222222223446789999999877654 45655555 4
Q ss_pred ccC-ceEEEecccCCCCeeEEEecCCCCEEEEecCCC---cee----------------eceEEEEEccCCceEEEecC-
Q psy7433 84 LRQ-RVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDG---DIK----------------SPVKCLAIDPHEEFFVTGAG- 142 (213)
Q Consensus 84 ~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~---~i~----------------~~v~~~~~~~~~~~l~~~~~- 142 (213)
+.. +.....+......+....|+|+|+.|+..+.++ .+. ..+....|+|||+.|+....
T Consensus 312 ~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~Lt~~~~~~~~p~wSpDG~~L~f~~~~ 391 (428)
T PRK01029 312 IDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQLTTSPENKESPSWAIDSLHLVYSAGN 391 (428)
T ss_pred CcccccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEEccCCCCCccceEECCCCCEEEEEECC
Confidence 432 233344444445677899999999888765432 121 24567899999997764432
Q ss_pred --CCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCC
Q psy7433 143 --DGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG 184 (213)
Q Consensus 143 --dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 184 (213)
...|.++|+..++........ +.+...+|+|
T Consensus 392 ~g~~~L~~vdl~~g~~~~Lt~~~-----------g~~~~p~Ws~ 424 (428)
T PRK01029 392 SNESELYLISLITKKTRKIVIGS-----------GEKRFPSWGA 424 (428)
T ss_pred CCCceEEEEECCCCCEEEeecCC-----------CcccCceecC
Confidence 346888888766543333221 3455667765
|
|
| >KOG2041|consensus | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.8e-09 Score=84.64 Aligned_cols=113 Identities=13% Similarity=0.069 Sum_probs=88.6
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcc------------cccceeeeeeecCCceEEEEecCCCEEEEEc
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQ------------KKALVQAFVCHDQGASSLVFAPQHQLLISAG 74 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 74 (213)
.....|++|+....++|.+| .||.+++..+.+.. +...-+++.+|+..|..+.|+.+.+.|-+..
T Consensus 14 nvkL~c~~WNke~gyIAcgG---~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSD 90 (1189)
T KOG2041|consen 14 NVKLHCAEWNKESGYIACGG---ADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSD 90 (1189)
T ss_pred CceEEEEEEcccCCeEEecc---ccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccC
Confidence 34678999999999999995 89999999874321 1123355779999999999999999999999
Q ss_pred CCCcEEEEeccCceEEEecc--cCCCCeeEEEecCCCCEEEEecCCCcee
Q psy7433 75 KKGDICVIDLRQRVIRSRFN--AHESPVKCLAIDPHEEFFVTGAGDGDIK 122 (213)
Q Consensus 75 ~d~~v~iwd~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~~~~i~ 122 (213)
.+|.|.+|-+-.+.....+. ...+.|.+++|+.+|..+...-+||.+.
T Consensus 91 t~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavI 140 (1189)
T KOG2041|consen 91 TSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVI 140 (1189)
T ss_pred CCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEE
Confidence 99999999887765443332 2456788999999998888777777664
|
|
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.22 E-value=3.9e-08 Score=71.20 Aligned_cols=199 Identities=9% Similarity=0.099 Sum_probs=129.4
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCc-ccccceeeeeeecCCceEEEEecCCCEEEEEcC-CCcEEEE
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLP-QKKALVQAFVCHDQGASSLVFAPQHQLLISAGK-KGDICVI 82 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~v~iw 82 (213)
++.+.++=|+|+|+++.|.++...+..|.|-.|.++.. .....+........+-+.+++++++++++++.. .|.|.++
T Consensus 37 ~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~g~v~v~ 116 (346)
T COG2706 37 AELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDEDGRFVFVANYHSGSVSVY 116 (346)
T ss_pred cccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECCCCCEEEEEEccCceEEEE
Confidence 34566788999999999998865445788988888521 222333333333445588999999999998875 4789999
Q ss_pred eccC-ceE---EEecccCCCC----------eeEEEecCCCCEEEEecC--CCcee-------------------eceEE
Q psy7433 83 DLRQ-RVI---RSRFNAHESP----------VKCLAIDPHEEFFVTGAG--DGDIK-------------------SPVKC 127 (213)
Q Consensus 83 d~~~-~~~---~~~~~~~~~~----------i~~~~~~~~~~~l~~~~~--~~~i~-------------------~~v~~ 127 (213)
-++. |.+ ++.+ .|.+. +....+.|+++++++... |.... ...+.
T Consensus 117 p~~~dG~l~~~v~~~-~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v~~G~GPRH 195 (346)
T COG2706 117 PLQADGSLQPVVQVV-KHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTPADPAEVKPGAGPRH 195 (346)
T ss_pred EcccCCccccceeee-ecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEcccCccccccccccCCCCCcce
Confidence 8865 322 1222 23333 788999999998887753 32221 77899
Q ss_pred EEEccCCceEEEecC-CCcEEEEEccCC-eeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEec--CCcEEEEeCC
Q psy7433 128 LAIDPHEEFFVTGAG-DGDIKVWSLSGN-HLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGA--DGSMKVRQLP 203 (213)
Q Consensus 128 ~~~~~~~~~l~~~~~-dg~i~v~d~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~--d~~i~iw~~~ 203 (213)
|.|+|++++..+.++ +++|.+|..... ..+..++........+.. ......+..+++++++-++. ..+|.+|.+.
T Consensus 196 i~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g-~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~ 274 (346)
T COG2706 196 IVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTG-TNWAAAIHISPDGRFLYASNRGHDSIAVFSVD 274 (346)
T ss_pred EEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCC-CCceeEEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 999999997666654 789999998753 333333332221111111 13566778888877544443 3477777776
Q ss_pred CC
Q psy7433 204 DR 205 (213)
Q Consensus 204 ~~ 205 (213)
..
T Consensus 275 ~~ 276 (346)
T COG2706 275 PD 276 (346)
T ss_pred CC
Confidence 54
|
|
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=99.21 E-value=2.6e-08 Score=74.12 Aligned_cols=177 Identities=12% Similarity=0.108 Sum_probs=120.0
Q ss_pred EeCCCCeEEEeeccC---------CCccEEEEeCCCcccccceeeeeeec-------CCceEEEEecCCCEEEEEc-C-C
Q psy7433 15 FLGSCSLVATAGHSS---------ESKNVCLWDSLLPQKKALVQAFVCHD-------QGASSLVFAPQHQLLISAG-K-K 76 (213)
Q Consensus 15 ~~~~~~~l~~~g~~s---------~~~~i~iwd~~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~~-~-d 76 (213)
++||++.|+.+. + .+..|.+||. .+.+.+..+.... .....++++|+|++|+... . +
T Consensus 53 ~spDg~~lyva~--~~~~R~~~G~~~d~V~v~D~---~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~ 127 (352)
T TIGR02658 53 VASDGSFFAHAS--TVYSRIARGKRTDYVEVIDP---QTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPS 127 (352)
T ss_pred ECCCCCEEEEEe--ccccccccCCCCCEEEEEEC---ccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCC
Confidence 899999888874 4 5789999999 6667776665321 2234789999999999776 3 6
Q ss_pred CcEEEEeccCceEEEecccCCC-------------------------------CeeEE--------------EecC-CCC
Q psy7433 77 GDICVIDLRQRVIRSRFNAHES-------------------------------PVKCL--------------AIDP-HEE 110 (213)
Q Consensus 77 ~~v~iwd~~~~~~~~~~~~~~~-------------------------------~i~~~--------------~~~~-~~~ 110 (213)
..|.+.|+.+++.+..+..... ..... .+.+ +++
T Consensus 128 ~~V~VvD~~~~kvv~ei~vp~~~~vy~t~e~~~~~~~~Dg~~~~v~~d~~g~~~~~~~~vf~~~~~~v~~rP~~~~~dg~ 207 (352)
T TIGR02658 128 PAVGVVDLEGKAFVRMMDVPDCYHIFPTANDTFFMHCRDGSLAKVGYGTKGNPKIKPTEVFHPEDEYLINHPAYSNKSGR 207 (352)
T ss_pred CEEEEEECCCCcEEEEEeCCCCcEEEEecCCccEEEeecCceEEEEecCCCceEEeeeeeecCCccccccCCceEcCCCc
Confidence 8899999998876654431110 00010 1122 455
Q ss_pred EEEEecCCCcee-----------------------------eceEEEEEccCCceEEEec----------CCCcEEEEEc
Q psy7433 111 FFVTGAGDGDIK-----------------------------SPVKCLAIDPHEEFFVTGA----------GDGDIKVWSL 151 (213)
Q Consensus 111 ~l~~~~~~~~i~-----------------------------~~v~~~~~~~~~~~l~~~~----------~dg~i~v~d~ 151 (213)
++.+..+ |.+. ..+.-++++|+++.+.+.. ..+.|.++|.
T Consensus 208 ~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~ 286 (352)
T TIGR02658 208 LVWPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDA 286 (352)
T ss_pred EEEEecC-CeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEEC
Confidence 5555444 5443 1222388999888666632 1247999999
Q ss_pred cCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe--EE-EEecCCcEEEEeCCCCccc
Q psy7433 152 SGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR--LF-SCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--l~-s~~~d~~i~iw~~~~~~~~ 208 (213)
++.+.+..+... ..+..++++|++. |+ +...++.|.+.|..+.+.+
T Consensus 287 ~t~kvi~~i~vG-----------~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k~i 335 (352)
T TIGR02658 287 KTGKRLRKIELG-----------HEIDSINVSQDAKPLLYALSTGDKTLYIFDAETGKEL 335 (352)
T ss_pred CCCeEEEEEeCC-----------CceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCeEE
Confidence 999999888764 5789999999754 44 3446788999999988544
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.7e-08 Score=77.62 Aligned_cols=180 Identities=6% Similarity=0.003 Sum_probs=105.7
Q ss_pred ceEEEEEeCCCCe-EEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEE-cC--CCcEEEEec
Q psy7433 9 ITSDFVFLGSCSL-VATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISA-GK--KGDICVIDL 84 (213)
Q Consensus 9 ~v~~~~~~~~~~~-l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~--d~~v~iwd~ 84 (213)
....-.|+|+|+. ++...+...+..|.++|+. +++. +.+....+......|+|||+.|+.. +. +..|.++|+
T Consensus 189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~---tg~~-~~lt~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl 264 (419)
T PRK04043 189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLY---TGKK-EKIASSQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDT 264 (419)
T ss_pred CeEeEEECCCCCcEEEEEEccCCCCEEEEEECC---CCcE-EEEecCCCcEEeeEECCCCCEEEEEEccCCCcEEEEEEC
Confidence 5667899999984 6654321124678888984 2322 2222234555678899999876643 32 356888888
Q ss_pred cCceEEEecccCCCCeeEEEecCCCCEEEEecCC-C--cee--------------eceEEEEEccCCceEEEecCC----
Q psy7433 85 RQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGD-G--DIK--------------SPVKCLAIDPHEEFFVTGAGD---- 143 (213)
Q Consensus 85 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~-~--~i~--------------~~v~~~~~~~~~~~l~~~~~d---- 143 (213)
.+++.. .+...........|+|||+.++..+.. + .+. .......|+|+|++++.....
T Consensus 265 ~~g~~~-~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~~g~~~~~~SPDG~~Ia~~~~~~~~~ 343 (419)
T PRK04043 265 NTKTLT-QITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVFHGKNNSSVSTYKNYIVYSSRETNNE 343 (419)
T ss_pred CCCcEE-EcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCccCCCcCceECCCCCEEEEEEcCCCcc
Confidence 777643 344333334456899999877776643 2 121 111235899999977766543
Q ss_pred -----CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEe-cCC--cEEEEeCCCC
Q psy7433 144 -----GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCG-ADG--SMKVRQLPDR 205 (213)
Q Consensus 144 -----g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~-~d~--~i~iw~~~~~ 205 (213)
..|.+.|+.++... .+... .......|+|++. ++..+ ..+ .+.+.++...
T Consensus 344 ~~~~~~~I~v~d~~~g~~~-~LT~~-----------~~~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l~g~ 402 (419)
T PRK04043 344 FGKNTFNLYLISTNSDYIR-RLTAN-----------GVNQFPRFSSDGGSIMFIKYLGNQSALGIIRLNYN 402 (419)
T ss_pred cCCCCcEEEEEECCCCCeE-ECCCC-----------CCcCCeEECCCCCEEEEEEccCCcEEEEEEecCCC
Confidence 26777888766532 23221 1223477899764 33322 223 3556666543
|
|
| >KOG1334|consensus | Back alignment and domain information |
|---|
Probab=99.20 E-value=3.9e-11 Score=89.33 Aligned_cols=156 Identities=21% Similarity=0.247 Sum_probs=121.6
Q ss_pred ceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecc-cCCCCeeEEEecC--CCCEEEEecCCCcee-
Q psy7433 47 LVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFN-AHESPVKCLAIDP--HEEFFVTGAGDGDIK- 122 (213)
Q Consensus 47 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~-~~~~~i~~~~~~~--~~~~l~~~~~~~~i~- 122 (213)
....+..|.+.|..+.|+..|..|++|+.|..|.+||...++....+. +|...|....|-| +...+++++.||+++
T Consensus 134 l~~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~ 213 (559)
T KOG1334|consen 134 LQKKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRV 213 (559)
T ss_pred hhhcccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceee
Confidence 345567899999999999999999999999999999999887776664 5767777777877 456799999999887
Q ss_pred -------------------eceEEEEEccCCc-eEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEe
Q psy7433 123 -------------------SPVKCLAIDPHEE-FFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHV 182 (213)
Q Consensus 123 -------------------~~v~~~~~~~~~~-~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 182 (213)
++|..++..|+.. -|.+++.|+.+.-+|++...+...+........ ..-....++.
T Consensus 214 s~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~----~~v~L~~Ia~ 289 (559)
T KOG1334|consen 214 SEILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEK----ERVGLYTIAV 289 (559)
T ss_pred eeeccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCc----cceeeeeEec
Confidence 7888899988765 688999999999999987765544432111000 0025677888
Q ss_pred CCC--CeEEEEecCCcEEEEeCCCCc
Q psy7433 183 DGG--SRLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 183 ~~~--~~l~s~~~d~~i~iw~~~~~~ 206 (213)
+|- +.+++++.|-.+++||.+.-.
T Consensus 290 ~P~nt~~faVgG~dqf~RvYD~R~~~ 315 (559)
T KOG1334|consen 290 DPRNTNEFAVGGSDQFARVYDQRRID 315 (559)
T ss_pred CCCCccccccCChhhhhhhhcccchh
Confidence 883 469999999999999987643
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.17 E-value=6e-08 Score=82.41 Aligned_cols=193 Identities=12% Similarity=0.120 Sum_probs=122.6
Q ss_pred ceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeee-----------------cCCceEEEEec-CCCEE
Q psy7433 9 ITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCH-----------------DQGASSLVFAP-QHQLL 70 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~-----------------~~~v~~~~~~~-~~~~l 70 (213)
....+++.++++.|+.+. ..++.|+++|... ..+.++.+. -.....++++| ++.++
T Consensus 625 ~P~GIavd~~gn~LYVaD--t~n~~Ir~id~~~----~~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~Ly 698 (1057)
T PLN02919 625 RPQGLAYNAKKNLLYVAD--TENHALREIDFVN----ETVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVY 698 (1057)
T ss_pred CCcEEEEeCCCCEEEEEe--CCCceEEEEecCC----CEEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEE
Confidence 467889999888666553 4567899999732 223222110 12346799999 56666
Q ss_pred EEEcCCCcEEEEeccCceEEEec--------cc------CCCCeeEEEecCCCCEEEEe-cCCCcee-------------
Q psy7433 71 ISAGKKGDICVIDLRQRVIRSRF--------NA------HESPVKCLAIDPHEEFFVTG-AGDGDIK------------- 122 (213)
Q Consensus 71 ~~~~~d~~v~iwd~~~~~~~~~~--------~~------~~~~i~~~~~~~~~~~l~~~-~~~~~i~------------- 122 (213)
++...++.|++||..++...... .+ .-.....++++|++..++++ ..++.|+
T Consensus 699 Vad~~~~~I~v~d~~~g~v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~ 778 (1057)
T PLN02919 699 IAMAGQHQIWEYNISDGVTRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLA 778 (1057)
T ss_pred EEECCCCeEEEEECCCCeEEEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEE
Confidence 77777889999999876542110 00 01235679999998854444 4444443
Q ss_pred -------------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCC---ceeEEEecC
Q psy7433 123 -------------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHA---RSSFFKHIG 174 (213)
Q Consensus 123 -------------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~---~~~~~~~~~ 174 (213)
.....++++++|+++++-+.++.|++||..++........... .........
T Consensus 779 gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l 858 (1057)
T PLN02919 779 GGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQL 858 (1057)
T ss_pred ecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCccccccc
Confidence 0235788999999888889999999999987665433221100 000001111
Q ss_pred CCeEEEEeCCCCe-EEEEecCCcEEEEeCCCCcc
Q psy7433 175 QGVTQLHVDGGSR-LFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 175 ~~v~~~~~~~~~~-l~s~~~d~~i~iw~~~~~~~ 207 (213)
.....+++++++. +++-+.++.|++||+.++..
T Consensus 859 ~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~~~~ 892 (1057)
T PLN02919 859 SEPAGLALGENGRLFVADTNNSLIRYLDLNKGEA 892 (1057)
T ss_pred CCceEEEEeCCCCEEEEECCCCEEEEEECCCCcc
Confidence 3577899998766 56666788999999988753
|
|
| >KOG1409|consensus | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.8e-10 Score=82.48 Aligned_cols=81 Identities=21% Similarity=0.369 Sum_probs=70.4
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
++.+|.+.+.+++|.|....|.++ ..|..+.+||+- ........+++|...|..+..-+--+.+++++.||.|.+
T Consensus 192 ~~~~h~~~~~~l~Wd~~~~~LfSg---~~d~~vi~wdig--g~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~ 266 (404)
T KOG1409|consen 192 TFNGHTGEVTCLKWDPGQRLLFSG---ASDHSVIMWDIG--GRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDGGIVV 266 (404)
T ss_pred EEcCcccceEEEEEcCCCcEEEec---cccCceEEEecc--CCcceeeeeccchhhhhhhhhhhhheeeeeccCCCeEEE
Confidence 678999999999999999999999 799999999993 344455667889999999988887889999999999999
Q ss_pred EeccCc
Q psy7433 82 IDLRQR 87 (213)
Q Consensus 82 wd~~~~ 87 (213)
||++..
T Consensus 267 w~mn~~ 272 (404)
T KOG1409|consen 267 WNMNVK 272 (404)
T ss_pred Eeccce
Confidence 998653
|
|
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.6e-08 Score=78.46 Aligned_cols=158 Identities=13% Similarity=0.026 Sum_probs=98.5
Q ss_pred cEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCC---CcEEEEeccCceEEEecccCCCCeeEEEecCCC
Q psy7433 33 NVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKK---GDICVIDLRQRVIRSRFNAHESPVKCLAIDPHE 109 (213)
Q Consensus 33 ~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~ 109 (213)
.|.++|.+ +...+.+..+...+....|+|+|+.|+..+.+ ..|.+||+.+++... +....+......|+|++
T Consensus 180 ~l~~~d~~----g~~~~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~-l~~~~g~~~~~~~SpDG 254 (430)
T PRK00178 180 TLQRSDYD----GARAVTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQ-ITNFEGLNGAPAWSPDG 254 (430)
T ss_pred EEEEECCC----CCCceEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEE-ccCCCCCcCCeEECCCC
Confidence 47777762 33334454566778999999999988776543 368999998876533 33334455678999999
Q ss_pred CEEEE-ecCCCc--ee----------------eceEEEEEccCCceEEEecC-CC--cEEEEEccCCeeeeeecCCCCce
Q psy7433 110 EFFVT-GAGDGD--IK----------------SPVKCLAIDPHEEFFVTGAG-DG--DIKVWSLSGNHLLYNFPGEHARS 167 (213)
Q Consensus 110 ~~l~~-~~~~~~--i~----------------~~v~~~~~~~~~~~l~~~~~-dg--~i~v~d~~~~~~~~~~~~~~~~~ 167 (213)
+.++. ...++. +. .......|+|+|+.++..+. +| .|.++|+.+++....... .
T Consensus 255 ~~la~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~lt~~-~--- 330 (430)
T PRK00178 255 SKLAFVLSKDGNPEIYVMDLASRQLSRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERVTFV-G--- 330 (430)
T ss_pred CEEEEEEccCCCceEEEEECCCCCeEEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecC-C---
Confidence 98774 334442 22 23456789999997665543 33 566777766553222111 1
Q ss_pred eEEEecCCCeEEEEeCCCC-eEEEEec-CC--cEEEEeCCCCc
Q psy7433 168 SFFKHIGQGVTQLHVDGGS-RLFSCGA-DG--SMKVRQLPDRD 206 (213)
Q Consensus 168 ~~~~~~~~~v~~~~~~~~~-~l~s~~~-d~--~i~iw~~~~~~ 206 (213)
.......|+|++ .++..+. ++ .|.+||+.+++
T Consensus 331 -------~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~ 366 (430)
T PRK00178 331 -------NYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGS 366 (430)
T ss_pred -------CCccceEECCCCCEEEEEEccCCceEEEEEECCCCC
Confidence 223456789865 4544443 33 57788887653
|
|
| >KOG2066|consensus | Back alignment and domain information |
|---|
Probab=99.14 E-value=4.5e-09 Score=82.99 Aligned_cols=170 Identities=18% Similarity=0.246 Sum_probs=124.8
Q ss_pred eEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceE
Q psy7433 10 TSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVI 89 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~ 89 (213)
+.|+++ .+++|+.| +.+|.|++.+.. +.. .+...|... ..+|.++++|+.||.|.|-.+-+.+.
T Consensus 42 is~~av--~~~~~~~G---tH~g~v~~~~~~----~~~-~~~~~~s~~------~~~Gey~asCS~DGkv~I~sl~~~~~ 105 (846)
T KOG2066|consen 42 ISCCAV--HDKFFALG---THRGAVYLTTCQ----GNP-KTNFDHSSS------ILEGEYVASCSDDGKVVIGSLFTDDE 105 (846)
T ss_pred HHHHHh--hcceeeec---cccceEEEEecC----Ccc-ccccccccc------ccCCceEEEecCCCcEEEeeccCCcc
Confidence 444554 36788888 789999999962 322 222233332 66899999999999999999988876
Q ss_pred EEecccCCCCeeEEEecCC-----CCEEEEecCCCcee------------------eceEEEEEccCCceEEEecCCCcE
Q psy7433 90 RSRFNAHESPVKCLAIDPH-----EEFFVTGAGDGDIK------------------SPVKCLAIDPHEEFFVTGAGDGDI 146 (213)
Q Consensus 90 ~~~~~~~~~~i~~~~~~~~-----~~~l~~~~~~~~i~------------------~~v~~~~~~~~~~~l~~~~~dg~i 146 (213)
..++. ...++.+++++|+ .+.+++|+..|.+. ++|.++.|. |.++|-++.+| |
T Consensus 106 ~~~~d-f~rpiksial~Pd~~~~~sk~fv~GG~aglvL~er~wlgnk~~v~l~~~eG~I~~i~W~--g~lIAWand~G-v 181 (846)
T KOG2066|consen 106 ITQYD-FKRPIKSIALHPDFSRQQSKQFVSGGMAGLVLSERNWLGNKDSVVLSEGEGPIHSIKWR--GNLIAWANDDG-V 181 (846)
T ss_pred ceeEe-cCCcceeEEeccchhhhhhhheeecCcceEEEehhhhhcCccceeeecCccceEEEEec--CcEEEEecCCC-c
Confidence 66554 5678999999997 56899999988432 889999998 78999998876 8
Q ss_pred EEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCC
Q psy7433 147 KVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 147 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~ 204 (213)
+|||+.+.+.+..++.+..... ...-...+.|.++.+|+-|-.| +|+|..++.
T Consensus 182 ~vyd~~~~~~l~~i~~p~~~~R----~e~fpphl~W~~~~~LVIGW~d-~v~i~~I~~ 234 (846)
T KOG2066|consen 182 KVYDTPTRQRLTNIPPPSQSVR----PELFPPHLHWQDEDRLVIGWGD-SVKICSIKK 234 (846)
T ss_pred EEEeccccceeeccCCCCCCCC----cccCCCceEecCCCeEEEecCC-eEEEEEEec
Confidence 9999998888887776542111 0123456788887777666444 788888873
|
|
| >KOG0309|consensus | Back alignment and domain information |
|---|
Probab=99.13 E-value=2e-10 Score=89.90 Aligned_cols=189 Identities=18% Similarity=0.241 Sum_probs=131.7
Q ss_pred ccccccCceEEEEEeCCC-CeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEE
Q psy7433 2 TYQCHNKITSDFVFLGSC-SLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDIC 80 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~-~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 80 (213)
.+.||+..|+.+.|+|+. ..++++ +.|..+..||++++ ...+..+..-......++|+-....+.+.+..+.|+
T Consensus 109 ~lhghsraitd~n~~~q~pdVlatc---svdt~vh~wd~rSp--~~p~ys~~~w~s~asqVkwnyk~p~vlasshg~~i~ 183 (1081)
T KOG0309|consen 109 VLHGHSRAITDINFNPQHPDVLATC---SVDTYVHAWDMRSP--HRPFYSTSSWRSAASQVKWNYKDPNVLASSHGNDIF 183 (1081)
T ss_pred EEecCccceeccccCCCCCcceeec---cccccceeeeccCC--CcceeeeecccccCceeeecccCcchhhhccCCceE
Confidence 467999999999999955 478888 89999999999743 445555555566788999987443444445667899
Q ss_pred EEeccCc-eEEEecccCCCCeeEEEecC-CCCEEEEecCCCcee------------------eceEEEEEccCCc--eEE
Q psy7433 81 VIDLRQR-VIRSRFNAHESPVKCLAIDP-HEEFFVTGAGDGDIK------------------SPVKCLAIDPHEE--FFV 138 (213)
Q Consensus 81 iwd~~~~-~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~i~------------------~~v~~~~~~~~~~--~l~ 138 (213)
+||++.+ .++..+++|...+..+.|+. ....+.+++.|++++ .++..-.+-|-|+ ++.
T Consensus 184 vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~vtt~~piw~~r~~Pfg~g~~~m 263 (1081)
T KOG0309|consen 184 VWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRTVTTNFPIWRGRYLPFGEGYCIM 263 (1081)
T ss_pred EEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeecccccccccceeccccCcceeccccccCceeEec
Confidence 9999876 67788888888888888876 334677888888886 5666666777555 222
Q ss_pred EecCCCcEEEEEccC----------CeeeeeecCCCCceeEEEecCCCeEEEEeC--------C---CCeEEEEecCCcE
Q psy7433 139 TGAGDGDIKVWSLSG----------NHLLYNFPGEHARSSFFKHIGQGVTQLHVD--------G---GSRLFSCGADGSM 197 (213)
Q Consensus 139 ~~~~dg~i~v~d~~~----------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--------~---~~~l~s~~~d~~i 197 (213)
---.+..+.+++.++ ..++..+.+|. ..|....|- - +-+|+|.+.|..+
T Consensus 264 p~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~----------D~V~eFlWR~r~e~~~d~d~rdfQLVTWSkD~~l 333 (1081)
T KOG0309|consen 264 PMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHD----------DVVLEFLWRKRKECDGDYDSRDFQLVTWSKDQTL 333 (1081)
T ss_pred cccCCeeeeeccccchhhhhccccCCcceeeecCcc----------hHHHHHhhhhcccccCCCCccceeEEEeecCCce
Confidence 222223444444332 34566677765 344443331 1 2259999999999
Q ss_pred EEEeCCCC
Q psy7433 198 KVRQLPDR 205 (213)
Q Consensus 198 ~iw~~~~~ 205 (213)
++|-+.+.
T Consensus 334 rlWpI~~~ 341 (1081)
T KOG0309|consen 334 RLWPIDSQ 341 (1081)
T ss_pred EeeeccHH
Confidence 99998764
|
|
| >KOG2695|consensus | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.8e-10 Score=81.64 Aligned_cols=142 Identities=25% Similarity=0.360 Sum_probs=99.8
Q ss_pred CCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCc-----eEEEecccCCCCeeEEE
Q psy7433 30 ESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR-----VIRSRFNAHESPVKCLA 104 (213)
Q Consensus 30 ~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~-----~~~~~~~~~~~~i~~~~ 104 (213)
.+..|-+-|++ ++ ....+. ....|.++.|...+++++.|..+|.|..+|++.+ .+.+.+. |+..|+++.
T Consensus 232 ~sqqv~L~nve---tg-~~qsf~-sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rly-h~Ssvtslq 305 (425)
T KOG2695|consen 232 LSQQVLLTNVE---TG-HQQSFQ-SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLY-HDSSVTSLQ 305 (425)
T ss_pred ccceeEEEEee---cc-cccccc-cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEEE-cCcchhhhh
Confidence 56778888873 22 333343 4677999999988999999999999999999865 1222222 445555544
Q ss_pred ecCCCCEEEEecCCCceeeceEEEEEccCCceEEEecCCCcEEEEEccCCee---eeeecCCCCceeEEEecCCCeEEEE
Q psy7433 105 IDPHEEFFVTGAGDGDIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHL---LYNFPGEHARSSFFKHIGQGVTQLH 181 (213)
Q Consensus 105 ~~~~~~~l~~~~~~~~i~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~---~~~~~~~~~~~~~~~~~~~~v~~~~ 181 (213)
... | ++++|++.+.+|.|++||+|.-++ +.++++|.... .-.-+.
T Consensus 306 ~Lq----------------------~--s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~--------a~l~~~ 353 (425)
T KOG2695|consen 306 ILQ----------------------F--SQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLS--------AYLPAH 353 (425)
T ss_pred hhc----------------------c--ccceEeeccCcCceeEeeehhhhcccceeeeecccccc--------cccccc
Confidence 332 1 357899999999999999987666 88888876321 111222
Q ss_pred eCC-CCeEEEEecCCcEEEEeCCCCcccc
Q psy7433 182 VDG-GSRLFSCGADGSMKVRQLPDRDAVV 209 (213)
Q Consensus 182 ~~~-~~~l~s~~~d~~i~iw~~~~~~~~~ 209 (213)
..+ ++.+++++.|...|||.+..+..+.
T Consensus 354 v~~eeg~I~s~GdDcytRiWsl~~ghLl~ 382 (425)
T KOG2695|consen 354 VKEEEGSIFSVGDDCYTRIWSLDSGHLLC 382 (425)
T ss_pred cccccceEEEccCeeEEEEEecccCceee
Confidence 334 4678999999999999999886553
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=99.12 E-value=3e-08 Score=74.43 Aligned_cols=111 Identities=9% Similarity=0.064 Sum_probs=91.1
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCc-cEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEe
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESK-NVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVID 83 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~-~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd 83 (213)
+|.+.|+-..+..+++-++.+ ..|| .+-|+|. .+..++.+...-+.|.+++.+|+|++++.+.....+-+.|
T Consensus 357 ~~~~~VrY~r~~~~~e~~vig---t~dgD~l~iyd~----~~~e~kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~vid 429 (668)
T COG4946 357 GKKGGVRYRRIQVDPEGDVIG---TNDGDKLGIYDK----DGGEVKRIEKDLGNIEAVKVSPDGKKVVVANDRFELWVID 429 (668)
T ss_pred CCCCceEEEEEccCCcceEEe---ccCCceEEEEec----CCceEEEeeCCccceEEEEEcCCCcEEEEEcCceEEEEEE
Confidence 566778888888777778877 6777 8999997 3344455566678899999999999999999999999999
Q ss_pred ccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee
Q psy7433 84 LRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122 (213)
Q Consensus 84 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~ 122 (213)
+++++....=+...+-|+.+.|+|+++++|-+..+|.+.
T Consensus 430 idngnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~t 468 (668)
T COG4946 430 IDNGNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYT 468 (668)
T ss_pred ecCCCeeEecccccceeEEEEEcCCceeEEEecCcceee
Confidence 999987655555667899999999999999998888654
|
|
| >KOG2315|consensus | Back alignment and domain information |
|---|
Probab=99.11 E-value=6.2e-09 Score=79.06 Aligned_cols=73 Identities=19% Similarity=0.404 Sum_probs=53.3
Q ss_pred eceEEEEEccCCceEE--EecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEec---CCc
Q psy7433 123 SPVKCLAIDPHEEFFV--TGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGA---DGS 196 (213)
Q Consensus 123 ~~v~~~~~~~~~~~l~--~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~---d~~ 196 (213)
++|.++.|+|+++-++ .|-.-..+.|||++ +.++..+.. ++=+++.|+|.+ +++.+|. .|.
T Consensus 271 GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr-~~~v~df~e------------gpRN~~~fnp~g~ii~lAGFGNL~G~ 337 (566)
T KOG2315|consen 271 GPVHDVTWSPSGREFAVVYGFMPAKVTIFNLR-GKPVFDFPE------------GPRNTAFFNPHGNIILLAGFGNLPGD 337 (566)
T ss_pred CCceEEEECCCCCEEEEEEecccceEEEEcCC-CCEeEeCCC------------CCccceEECCCCCEEEEeecCCCCCc
Confidence 7899999999987444 34456788899975 566666644 567889999965 4555554 579
Q ss_pred EEEEeCCCCccc
Q psy7433 197 MKVRQLPDRDAV 208 (213)
Q Consensus 197 i~iw~~~~~~~~ 208 (213)
+-|||+.+.+++
T Consensus 338 mEvwDv~n~K~i 349 (566)
T KOG2315|consen 338 MEVWDVPNRKLI 349 (566)
T ss_pred eEEEeccchhhc
Confidence 999999985443
|
|
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=7.1e-09 Score=80.60 Aligned_cols=157 Identities=13% Similarity=0.113 Sum_probs=95.0
Q ss_pred eEEEEEeCCCCeEEEeeccCCCcc--EEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcC-CC--cEEEEec
Q psy7433 10 TSDFVFLGSCSLVATAGHSSESKN--VCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGK-KG--DICVIDL 84 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~s~~~~--i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~--~v~iwd~ 84 (213)
....+|+|||+.|+... +.++. |.++|++ .+ ....+..+........|+|+++.|+..+. ++ .|.++|+
T Consensus 264 ~~~~~wSPDG~~La~~~--~~~g~~~Iy~~dl~---tg-~~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl 337 (448)
T PRK04792 264 NGAPRFSPDGKKLALVL--SKDGQPEIYVVDIA---TK-ALTRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNL 337 (448)
T ss_pred cCCeeECCCCCEEEEEE--eCCCCeEEEEEECC---CC-CeEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEEC
Confidence 44679999999887653 35554 7777773 22 23344444555678899999998776543 33 4666777
Q ss_pred cCceEEEecccCCCCeeEEEecCCCCEEEEecCCCc---ee---------------eceEEEEEccCCceEEEecCC-C-
Q psy7433 85 RQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGD---IK---------------SPVKCLAIDPHEEFFVTGAGD-G- 144 (213)
Q Consensus 85 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~---i~---------------~~v~~~~~~~~~~~l~~~~~d-g- 144 (213)
.+++.... ..........+|+|+++.++..+.++. +. .......|+|+|++|+..+.+ +
T Consensus 338 ~~g~~~~L-t~~g~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~~~lt~~~~d~~ps~spdG~~I~~~~~~~g~ 416 (448)
T PRK04792 338 ASGKVSRL-TFEGEQNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAMQVLTSTRLDESPSVAPNGTMVIYSTTYQGK 416 (448)
T ss_pred CCCCEEEE-ecCCCCCcCeeECCCCCEEEEEEecCCceEEEEEECCCCCeEEccCCCCCCCceECCCCCEEEEEEecCCc
Confidence 77754332 212222345789999998877655331 21 111234799999977665543 3
Q ss_pred -cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCC
Q psy7433 145 -DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG 184 (213)
Q Consensus 145 -~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 184 (213)
.+.+++. ++.....+..+. +.+...+|+|
T Consensus 417 ~~l~~~~~-~G~~~~~l~~~~----------g~~~~p~Wsp 446 (448)
T PRK04792 417 QVLAAVSI-DGRFKARLPAGQ----------GEVKSPAWSP 446 (448)
T ss_pred eEEEEEEC-CCCceEECcCCC----------CCcCCCccCC
Confidence 3666675 455555554432 3456667765
|
|
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.5e-07 Score=68.28 Aligned_cols=191 Identities=14% Similarity=0.137 Sum_probs=123.9
Q ss_pred eEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCC----------ceEEEEecCCCEEEEEcC-CCc
Q psy7433 10 TSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQG----------ASSLVFAPQHQLLISAGK-KGD 78 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~----------v~~~~~~~~~~~l~~~~~-d~~ 78 (213)
..-++++++|++++++.| ..|.|.++-++...........-.|.+. +....+.|++++|++..- --.
T Consensus 91 p~yvsvd~~g~~vf~AnY--~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dr 168 (346)
T COG2706 91 PCYVSVDEDGRFVFVANY--HSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDR 168 (346)
T ss_pred CeEEEECCCCCEEEEEEc--cCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCce
Confidence 366889999999999975 6689999998532222222222234443 888999999999998752 237
Q ss_pred EEEEeccCceEEEec---ccCCCCeeEEEecCCCCEEEEecC-CCcee---------------------------eceEE
Q psy7433 79 ICVIDLRQRVIRSRF---NAHESPVKCLAIDPHEEFFVTGAG-DGDIK---------------------------SPVKC 127 (213)
Q Consensus 79 v~iwd~~~~~~~~~~---~~~~~~i~~~~~~~~~~~l~~~~~-~~~i~---------------------------~~v~~ 127 (213)
|.+|++..++....- -......+.|.|+|++++..+..+ +++|. .....
T Consensus 169 i~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aa 248 (346)
T COG2706 169 IFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAA 248 (346)
T ss_pred EEEEEcccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeE
Confidence 899999877533211 124456789999999987665554 33332 67788
Q ss_pred EEEccCCceEEEecCC-CcEEEEEccCC-eeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEec-CCcEEEEeCC
Q psy7433 128 LAIDPHEEFFVTGAGD-GDIKVWSLSGN-HLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGA-DGSMKVRQLP 203 (213)
Q Consensus 128 ~~~~~~~~~l~~~~~d-g~i~v~d~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~-d~~i~iw~~~ 203 (213)
+..+|+|++|.++..- ..|.+|.+... ..+....... ..+.......+++++ +|+++.. +..|.+|.+.
T Consensus 249 Ihis~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~-------teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d 321 (346)
T COG2706 249 IHISPDGRFLYASNRGHDSIAVFSVDPDGGKLELVGITP-------TEGQFPRDFNINPSGRFLIAANQKSDNITVFERD 321 (346)
T ss_pred EEECCCCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEec-------cCCcCCccceeCCCCCEEEEEccCCCcEEEEEEc
Confidence 9999999998888543 46778877432 2222221111 012446778888865 4555554 4589999887
Q ss_pred CCcccc
Q psy7433 204 DRDAVV 209 (213)
Q Consensus 204 ~~~~~~ 209 (213)
...-.+
T Consensus 322 ~~TG~L 327 (346)
T COG2706 322 KETGRL 327 (346)
T ss_pred CCCceE
Confidence 654443
|
|
| >KOG4547|consensus | Back alignment and domain information |
|---|
Probab=99.06 E-value=1e-08 Score=78.17 Aligned_cols=105 Identities=18% Similarity=0.308 Sum_probs=94.0
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEec
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDL 84 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~ 84 (213)
.|.+.|.++.++.+-..|.++ +.|..+..|+. .....++.++.....+.+++.+||+..+++++ ++|++||+
T Consensus 100 ~h~~~v~~~~~~~~~~ciyS~---~ad~~v~~~~~---~~~~~~~~~~~~~~~~~sl~is~D~~~l~~as--~~ik~~~~ 171 (541)
T KOG4547|consen 100 KHYGNVNEILDAQRLGCIYSV---GADLKVVYILE---KEKVIIRIWKEQKPLVSSLCISPDGKILLTAS--RQIKVLDI 171 (541)
T ss_pred CCCCcceeeecccccCceEec---CCceeEEEEec---ccceeeeeeccCCCccceEEEcCCCCEEEecc--ceEEEEEc
Confidence 688999999999999999999 68999999998 67788888888888999999999999999986 68999999
Q ss_pred cCceEEEecccCCCCeeEEEecCC-----CCEEEEecC
Q psy7433 85 RQRVIRSRFNAHESPVKCLAIDPH-----EEFFVTGAG 117 (213)
Q Consensus 85 ~~~~~~~~~~~~~~~i~~~~~~~~-----~~~l~~~~~ 117 (213)
++++.+..|.+|.++|++++|... |.++++...
T Consensus 172 ~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~ 209 (541)
T KOG4547|consen 172 ETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAA 209 (541)
T ss_pred cCceEEEEecCCCcceEEEEEEEeccccccceeeeccc
Confidence 999999999999999999999876 666665544
|
|
| >PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=99.06 E-value=7.8e-10 Score=55.46 Aligned_cols=38 Identities=29% Similarity=0.483 Sum_probs=35.8
Q ss_pred cceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEe
Q psy7433 46 ALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVID 83 (213)
Q Consensus 46 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd 83 (213)
+++..+++|...|.+++|+|++++|++++.|+.|++||
T Consensus 2 ~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 2 KCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred eEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 46788999999999999999999999999999999997
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g .... |
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=99.05 E-value=9.1e-08 Score=80.06 Aligned_cols=182 Identities=14% Similarity=0.143 Sum_probs=119.1
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCC------------ccc--------ccceeeeee-------------
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLL------------PQK--------KALVQAFVC------------- 53 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~------------~~~--------~~~~~~~~~------------- 53 (213)
...|.+++||||+..||.. +.++++.+.+-.- ... ++....|++
T Consensus 120 d~GI~a~~WSPD~Ella~v---T~~~~l~~mt~~fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p 196 (928)
T PF04762_consen 120 DSGILAASWSPDEELLALV---TGEGNLLLMTRDFDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDP 196 (928)
T ss_pred cCcEEEEEECCCcCEEEEE---eCCCEEEEEeccceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCC
Confidence 4679999999999999988 6788887775210 000 000011100
Q ss_pred -----------ecCCceEEEEecCCCEEEEEcC------CCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEec
Q psy7433 54 -----------HDQGASSLVFAPQHQLLISAGK------KGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGA 116 (213)
Q Consensus 54 -----------~~~~v~~~~~~~~~~~l~~~~~------d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 116 (213)
....-..+.|-.||.++|+.+. -+.+++|+-+ |..........+--.+++|.|.|+.+++..
T Consensus 197 ~~~~~d~~~~s~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~stSE~v~gLe~~l~WrPsG~lIA~~q 275 (928)
T PF04762_consen 197 TVPKVDEGKLSWDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GELQSTSEPVDGLEGALSWRPSGNLIASSQ 275 (928)
T ss_pred CCCccccCccccCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ceEEeccccCCCccCCccCCCCCCEEEEEE
Confidence 2234567889999999998764 2579999865 665544444444456899999999999887
Q ss_pred CCC---cee--------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCee--eeeecCCCCceeEEE
Q psy7433 117 GDG---DIK--------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHL--LYNFPGEHARSSFFK 171 (213)
Q Consensus 117 ~~~---~i~--------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~--~~~~~~~~~~~~~~~ 171 (213)
... .+. ..|..+.|++++..|+....|. |.+|-..+.+- .+.+.....
T Consensus 276 ~~~~~~~VvFfErNGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NYHWYLKqei~~~~~------ 348 (928)
T PF04762_consen 276 RLPDRHDVVFFERNGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSNYHWYLKQEIRFSSS------ 348 (928)
T ss_pred EcCCCcEEEEEecCCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeCCEEEEEEEEEccCC------
Confidence 522 111 5789999999999999977664 99999877652 233332221
Q ss_pred ecCCCeEEEEeCCC--CeEEEEecCCcEEEEeC
Q psy7433 172 HIGQGVTQLHVDGG--SRLFSCGADGSMKVRQL 202 (213)
Q Consensus 172 ~~~~~v~~~~~~~~--~~l~s~~~d~~i~iw~~ 202 (213)
..+..+.|+|. .+|.....+|.+..+++
T Consensus 349 ---~~~~~~~Wdpe~p~~L~v~t~~g~~~~~~~ 378 (928)
T PF04762_consen 349 ---ESVNFVKWDPEKPLRLHVLTSNGQYEIYDF 378 (928)
T ss_pred ---CCCCceEECCCCCCEEEEEecCCcEEEEEE
Confidence 34555889883 35666666666655443
|
|
| >KOG4532|consensus | Back alignment and domain information |
|---|
Probab=99.03 E-value=8.5e-08 Score=67.03 Aligned_cols=180 Identities=8% Similarity=-0.031 Sum_probs=114.9
Q ss_pred CCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec-CCCEEEEEcCCCcEEEEeccCceEEEecccC
Q psy7433 18 SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP-QHQLLISAGKKGDICVIDLRQRVIRSRFNAH 96 (213)
Q Consensus 18 ~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~ 96 (213)
...+||.+| .-|...+|...+ ....+.....+...|+-+.=.. ..-.+..++.|.++++.+++-+.........
T Consensus 83 kc~~la~gG---~~g~fd~~~~~t--n~~h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~~~~~h~~ 157 (344)
T KOG4532|consen 83 KCVTLADGG---ASGQFDLFACNT--NDGHLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSNKFAVHNQ 157 (344)
T ss_pred cccEEEecc---ccceeeeecccC--cccceeeecccccchhhhhhhcccccceeeccCCcceeEEEEecCcccceeecc
Confidence 345788884 789999999842 2223333333444343322212 2234667778888888888654332222212
Q ss_pred CCCeeEEEecCCCCEEEEecCCCcee--------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCee
Q psy7433 97 ESPVKCLAIDPHEEFFVTGAGDGDIK--------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHL 156 (213)
Q Consensus 97 ~~~i~~~~~~~~~~~l~~~~~~~~i~--------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~ 156 (213)
.-...+++++++++++++.+....+. ..-.+..|+.....+|++.+||.+.|||+|....
T Consensus 158 ~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~t 237 (344)
T KOG4532|consen 158 NLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMAT 237 (344)
T ss_pred ccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEeccccc
Confidence 23378999999999999888877664 3446778888888999999999999999986443
Q ss_pred eeeecCCCCceeEEEecCCCeEEEEeCCCC---eEEEEecCCcEEEEeCCCCcc
Q psy7433 157 LYNFPGEHARSSFFKHIGQGVTQLHVDGGS---RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~l~s~~~d~~i~iw~~~~~~~ 207 (213)
........ ..+|.+.+..+.|++.+ .|+-.-.-+.+.+-|+++...
T Consensus 238 pm~~~sst-----rp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~ 286 (344)
T KOG4532|consen 238 PMAEISST-----RPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVN 286 (344)
T ss_pred chhhhccc-----CCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCce
Confidence 22221111 11234889999999744 344444456788888887644
|
|
| >PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=99.00 E-value=7.9e-10 Score=55.44 Aligned_cols=34 Identities=18% Similarity=0.448 Sum_probs=32.4
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEe
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWD 38 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd 38 (213)
+|++|.++|++++|+|++++|+++ +.|+.|++||
T Consensus 6 ~~~~h~~~i~~i~~~~~~~~~~s~---~~D~~i~vwd 39 (39)
T PF00400_consen 6 TFRGHSSSINSIAWSPDGNFLASG---SSDGTIRVWD 39 (39)
T ss_dssp EEESSSSSEEEEEEETTSSEEEEE---ETTSEEEEEE
T ss_pred EEcCCCCcEEEEEEecccccceee---CCCCEEEEEC
Confidence 689999999999999999999999 6899999997
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g .... |
| >KOG2695|consensus | Back alignment and domain information |
|---|
Probab=98.96 E-value=3.3e-09 Score=76.28 Aligned_cols=144 Identities=22% Similarity=0.292 Sum_probs=104.7
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCccc--ccceeeeeeecCCceEEEEec-CCCEEEEEcCCCcEEEEe
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQK--KALVQAFVCHDQGASSLVFAP-QHQLLISAGKKGDICVID 83 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~--~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~iwd 83 (213)
++.|.++.|...++++..| ..+|.|...|++.... +.+...+ -|...|+++..-. ++++|.+.+.+|.|++||
T Consensus 252 ksDVfAlQf~~s~nLv~~G---cRngeI~~iDLR~rnqG~~~~a~rl-yh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD 327 (425)
T KOG2695|consen 252 KSDVFALQFAGSDNLVFNG---CRNGEIFVIDLRCRNQGNGWCAQRL-YHDSSVTSLQILQFSQQKLMASDMTGKIKLYD 327 (425)
T ss_pred chhHHHHHhcccCCeeEec---ccCCcEEEEEeeecccCCCcceEEE-EcCcchhhhhhhccccceEeeccCcCceeEee
Confidence 4567888888888888888 8999999999964322 2333333 3888999998776 778999999999999999
Q ss_pred ccCceE---EEecccCCCCeeEEEecCCCCEEEEecCCCceeeceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeee
Q psy7433 84 LRQRVI---RSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNF 160 (213)
Q Consensus 84 ~~~~~~---~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~ 160 (213)
++--+. +.++.+|.. ..+..| +-.++....++++++|-..+||.++.+..+.++
T Consensus 328 ~R~~K~~~~V~qYeGHvN---~~a~l~--------------------~~v~~eeg~I~s~GdDcytRiWsl~~ghLl~ti 384 (425)
T KOG2695|consen 328 LRATKCKKSVMQYEGHVN---LSAYLP--------------------AHVKEEEGSIFSVGDDCYTRIWSLDSGHLLCTI 384 (425)
T ss_pred ehhhhcccceeeeecccc---cccccc--------------------cccccccceEEEccCeeEEEEEecccCceeecc
Confidence 987665 666666533 333332 113455567888999999999999999999988
Q ss_pred cCCCCceeEEEecCCCeEEEEeC
Q psy7433 161 PGEHARSSFFKHIGQGVTQLHVD 183 (213)
Q Consensus 161 ~~~~~~~~~~~~~~~~v~~~~~~ 183 (213)
+....... ..+.++++.
T Consensus 385 pf~~s~~e------~d~~sv~~~ 401 (425)
T KOG2695|consen 385 PFPYSASE------VDIPSVAFD 401 (425)
T ss_pred CCCCcccc------ccccceehh
Confidence 87653321 245666664
|
|
| >KOG1645|consensus | Back alignment and domain information |
|---|
Probab=98.94 E-value=6e-08 Score=71.25 Aligned_cols=79 Identities=16% Similarity=0.246 Sum_probs=65.5
Q ss_pred ccccccCceEEEEEeCCCC-eEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCC-CEEEEEcCCCcE
Q psy7433 2 TYQCHNKITSDFVFLGSCS-LVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQH-QLLISAGKKGDI 79 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~-~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v 79 (213)
.+.+|...|++++|+|..+ ++..+ +.+..|+|.|+ ++..++..+..+ ..+.+++|..+. ++|++|..+|.|
T Consensus 188 ~lp~~g~~IrdlafSp~~~GLl~~a---sl~nkiki~dl---et~~~vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~V 260 (463)
T KOG1645|consen 188 ILPGEGSFIRDLAFSPFNEGLLGLA---SLGNKIKIMDL---ETSCVVSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMV 260 (463)
T ss_pred cccccchhhhhhccCccccceeeee---ccCceEEEEec---ccceeeeheecc-CCceeeeeccCCcceeEEeccCceE
Confidence 3567889999999999877 55555 78999999999 566677777766 779999998854 678899999999
Q ss_pred EEEeccCc
Q psy7433 80 CVIDLRQR 87 (213)
Q Consensus 80 ~iwd~~~~ 87 (213)
.+||++..
T Consensus 261 lvyD~R~~ 268 (463)
T KOG1645|consen 261 LVYDMRQP 268 (463)
T ss_pred EEEEccCC
Confidence 99999864
|
|
| >KOG4532|consensus | Back alignment and domain information |
|---|
Probab=98.93 E-value=2.5e-07 Score=64.76 Aligned_cols=166 Identities=8% Similarity=-0.033 Sum_probs=107.1
Q ss_pred eEEEEEeCCCCeEEEeeccCCCccEEEEeCCCccccccee-eeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCce
Q psy7433 10 TSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQ-AFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRV 88 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~ 88 (213)
+.+++++++++++++.| ....|..|.+.... ...++ ........-.+..|+.+...+|++..||.+.|||++...
T Consensus 161 ~ns~~~snd~~~~~~Vg---ds~~Vf~y~id~~s-ey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~ 236 (344)
T KOG4532|consen 161 QNSLHYSNDPSWGSSVG---DSRRVFRYAIDDES-EYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMA 236 (344)
T ss_pred eeeeEEcCCCceEEEec---CCCcceEEEeCCcc-ceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEecccc
Confidence 78899999999999994 78899999985322 22233 223334455678899999999999999999999998753
Q ss_pred EEE-----ecccCCCCeeEEEecCCCCEEEEecCCCceeeceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCC
Q psy7433 89 IRS-----RFNAHESPVKCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGE 163 (213)
Q Consensus 89 ~~~-----~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~ 163 (213)
... +-+.|.+.+..+.|++-|.. .+|+..-.-+.+++.|+|++...+.+...
T Consensus 237 tpm~~~sstrp~hnGa~R~c~Fsl~g~l-----------------------DLLf~sEhfs~~hv~D~R~~~~~q~I~i~ 293 (344)
T KOG4532|consen 237 TPMAEISSTRPHHNGAFRVCRFSLYGLL-----------------------DLLFISEHFSRVHVVDTRNYVNHQVIVIP 293 (344)
T ss_pred cchhhhcccCCCCCCceEEEEecCCCcc-----------------------eEEEEecCcceEEEEEcccCceeeEEecC
Confidence 221 11235666777777764321 24444444578999999988776665543
Q ss_pred CCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCC
Q psy7433 164 HARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 164 ~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~ 205 (213)
... .+++....|....|+.++ .+.+.+.+ .+.=|++.+.
T Consensus 294 ~d~--~~~~~tq~ifgt~f~~~n~s~~v~~e~-~~ae~ni~sr 333 (344)
T KOG4532|consen 294 DDV--ERKHNTQHIFGTNFNNENESNDVKNEL-QGAEYNILSR 333 (344)
T ss_pred ccc--cccccccccccccccCCCcccccccch-hhheeecccc
Confidence 321 233334557777787643 34333332 3455665543
|
|
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.6e-06 Score=65.76 Aligned_cols=183 Identities=15% Similarity=0.208 Sum_probs=119.8
Q ss_pred CceEEEEEeCCC--CeEEEee--ccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEc---------
Q psy7433 8 KITSDFVFLGSC--SLVATAG--HSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG--------- 74 (213)
Q Consensus 8 ~~v~~~~~~~~~--~~l~~~g--~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--------- 74 (213)
..|....|+|.+ .-||.-. .....+++++|.+. ....+.+-.-....=..+.|.+.|++|+.--
T Consensus 174 ~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp---~~s~l~tk~lfk~~~~qLkW~~~g~~ll~l~~t~~ksnKs 250 (561)
T COG5354 174 VGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIP---KNSVLVTKNLFKVSGVQLKWQVLGKYLLVLVMTHTKSNKS 250 (561)
T ss_pred cceeeEEecCCCCCceEEEEccccCCCCcEEEEEEcc---CCCeeeeeeeEeecccEEEEecCCceEEEEEEEeeecccc
Confidence 457888899853 3444321 01357899999983 3444433322233345788999998766321
Q ss_pred --CCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecC--C---------Ccee-----eceEEEEEccCCce
Q psy7433 75 --KKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAG--D---------GDIK-----SPVKCLAIDPHEEF 136 (213)
Q Consensus 75 --~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--~---------~~i~-----~~v~~~~~~~~~~~ 136 (213)
...++.|+++......... ...++|...+|.|.++.|++.+. . +.++ ..=..+.|+|.+++
T Consensus 251 yfgesnLyl~~~~e~~i~V~~-~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~Nl~~~~Pe~~rNT~~fsp~~r~ 329 (561)
T COG5354 251 YFGESNLYLLRITERSIPVEK-DLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGNLRFYFPEQKRNTIFFSPHERY 329 (561)
T ss_pred eeccceEEEEeecccccceec-cccccceeeeecccCCceeEEecccccceeecccccceEEecCCcccccccccCcccE
Confidence 2356888888754433332 56789999999999998888762 1 1222 34466889999999
Q ss_pred EEEecCC---CcEEEEEccCCeeee-eecCCCCceeEEEecCCCeEEEEeCCCCeE-EEE--e----cCCcEEEEeCCCC
Q psy7433 137 FVTGAGD---GDIKVWSLSGNHLLY-NFPGEHARSSFFKHIGQGVTQLHVDGGSRL-FSC--G----ADGSMKVRQLPDR 205 (213)
Q Consensus 137 l~~~~~d---g~i~v~d~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l-~s~--~----~d~~i~iw~~~~~ 205 (213)
++.++-+ |.+.+||........ .+.+. ...-+.|+|++.+ .+. + .|..++|||+...
T Consensus 330 il~agF~nl~gni~i~~~~~rf~~~~~~~~~------------n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g~ 397 (561)
T COG5354 330 ILFAGFDNLQGNIEIFDPAGRFKVAGAFNGL------------NTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYGA 397 (561)
T ss_pred EEEecCCccccceEEeccCCceEEEEEeecC------------CceEeeccCCceEEEecCCCcccccCcceEEEEecCc
Confidence 8887655 789999986544443 66653 3566789998753 222 2 3789999999865
Q ss_pred c
Q psy7433 206 D 206 (213)
Q Consensus 206 ~ 206 (213)
.
T Consensus 398 ~ 398 (561)
T COG5354 398 K 398 (561)
T ss_pred h
Confidence 3
|
|
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.3e-07 Score=71.36 Aligned_cols=80 Identities=19% Similarity=0.255 Sum_probs=60.2
Q ss_pred ccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCC---------
Q psy7433 6 HNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKK--------- 76 (213)
Q Consensus 6 h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------- 76 (213)
..-++...+|||.|.+|++. ....|.+|+- .....+..+. ...|..+.|+|++++|.+=+..
T Consensus 31 ~~~p~~~~~~SP~G~~l~~~----~~~~V~~~~g---~~~~~l~~~~--~~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~ 101 (561)
T COG5354 31 ENWPVAYVSESPLGTYLFSE----HAAGVECWGG---PSKAKLVRFR--HPDVKYLDFSPNEKYLVTWSREPIIEPEIEI 101 (561)
T ss_pred cCcchhheeecCcchheehh----hccceEEccc---cchhheeeee--cCCceecccCcccceeeeeccCCccChhhcc
Confidence 45578889999999999987 5678999997 3333444433 4569999999999999886533
Q ss_pred ------CcEEEEeccCceEEEecc
Q psy7433 77 ------GDICVIDLRQRVIRSRFN 94 (213)
Q Consensus 77 ------~~v~iwd~~~~~~~~~~~ 94 (213)
..+.+||..++..+..+.
T Consensus 102 sp~~~~n~~~vwd~~sg~iv~sf~ 125 (561)
T COG5354 102 SPFTSKNNVFVWDIASGMIVFSFN 125 (561)
T ss_pred CCccccCceeEEeccCceeEeecc
Confidence 359999999887665443
|
|
| >KOG2114|consensus | Back alignment and domain information |
|---|
Probab=98.88 E-value=2.8e-07 Score=73.79 Aligned_cols=174 Identities=18% Similarity=0.269 Sum_probs=120.4
Q ss_pred EEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCC-ceEEEEecCCCEEEEEcCCC-----cEEEEeccCc
Q psy7433 14 VFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQG-ASSLVFAPQHQLLISAGKKG-----DICVIDLRQR 87 (213)
Q Consensus 14 ~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~d~-----~v~iwd~~~~ 87 (213)
+|++++..+|.| +.+|.|.+.+ ...+.+..++.+... |..+....+.++|++.+.|+ .+++||++.-
T Consensus 30 c~~s~~~~vvig---t~~G~V~~Ln----~s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~ 102 (933)
T KOG2114|consen 30 CCSSSTGSVVIG---TADGRVVILN----SSFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKV 102 (933)
T ss_pred EEcCCCceEEEe---eccccEEEec----ccceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEeccccc
Confidence 467888889988 7999999988 456666788888777 44444333446788776654 4899999632
Q ss_pred ------eEE---Eec----ccCCCCeeEEEecCCCCEEEEecCCCcee---------------------eceEEEEEccC
Q psy7433 88 ------VIR---SRF----NAHESPVKCLAIDPHEEFFVTGAGDGDIK---------------------SPVKCLAIDPH 133 (213)
Q Consensus 88 ------~~~---~~~----~~~~~~i~~~~~~~~~~~l~~~~~~~~i~---------------------~~v~~~~~~~~ 133 (213)
+++ +.+ +....++.+++.+.+-+.+++|..+|.+. .+|+.+.+..+
T Consensus 103 ~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d 182 (933)
T KOG2114|consen 103 DKNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSD 182 (933)
T ss_pred CCCCCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecC
Confidence 222 111 12356789999999999999999999885 89999999988
Q ss_pred Cce-EEEecCCCcEEEEEccCCeeeee-ecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEecCCcEEEEeCCCCc
Q psy7433 134 EEF-FVTGAGDGDIKVWSLSGNHLLYN-FPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 134 ~~~-l~~~~~dg~i~v~d~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~d~~i~iw~~~~~~ 206 (213)
++. +.+++ ...|.+|.+....+... +..+ |.+..|..+++... ++.++ +..+.+|+.....
T Consensus 183 ~~s~lFv~T-t~~V~~y~l~gr~p~~~~ld~~----------G~~lnCss~~~~t~qfIca~-~e~l~fY~sd~~~ 246 (933)
T KOG2114|consen 183 GKSVLFVAT-TEQVMLYSLSGRTPSLKVLDNN----------GISLNCSSFSDGTYQFICAG-SEFLYFYDSDGRG 246 (933)
T ss_pred CceeEEEEe-cceeEEEEecCCCcceeeeccC----------CccceeeecCCCCccEEEec-CceEEEEcCCCcc
Confidence 885 34443 34688898863332222 3333 47888988887543 55544 3468888877543
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=98.88 E-value=7.9e-07 Score=67.06 Aligned_cols=130 Identities=9% Similarity=0.176 Sum_probs=102.5
Q ss_pred CCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCC-cEEEEeccCceEEEecccC
Q psy7433 18 SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKG-DICVIDLRQRVIRSRFNAH 96 (213)
Q Consensus 18 ~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~v~iwd~~~~~~~~~~~~~ 96 (213)
+|++++.. .-|...|.+. ..+..+.. ++.+.|.-..+..+++-++.|..|| .+-++|.++++... +...
T Consensus 331 ~Gd~ia~V----SRGkaFi~~~---~~~~~iqv--~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~kr-~e~~ 400 (668)
T COG4946 331 NGDYIALV----SRGKAFIMRP---WDGYSIQV--GKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEVKR-IEKD 400 (668)
T ss_pred CCcEEEEE----ecCcEEEECC---CCCeeEEc--CCCCceEEEEEccCCcceEEeccCCceEEEEecCCceEEE-eeCC
Confidence 68888888 4677888875 23333322 4667788888888888899999998 89999999887544 4556
Q ss_pred CCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCCC----cEEEEEccCCe
Q psy7433 97 ESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDG----DIKVWSLSGNH 155 (213)
Q Consensus 97 ~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg----~i~v~d~~~~~ 155 (213)
-+.|.++..+|+|+.++++.....+. .-|+.+.|||+++++|-+--+| .|+++|+..++
T Consensus 401 lg~I~av~vs~dGK~~vvaNdr~el~vididngnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~K 480 (668)
T COG4946 401 LGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGK 480 (668)
T ss_pred ccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCeeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCe
Confidence 78899999999999988887776654 7899999999999999987665 68999998766
Q ss_pred ee
Q psy7433 156 LL 157 (213)
Q Consensus 156 ~~ 157 (213)
..
T Consensus 481 iy 482 (668)
T COG4946 481 IY 482 (668)
T ss_pred EE
Confidence 54
|
|
| >PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators [] | Back alignment and domain information |
|---|
Probab=98.87 E-value=8e-06 Score=58.17 Aligned_cols=190 Identities=6% Similarity=0.066 Sum_probs=110.0
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeee-cCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCH-DQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
+.+-.+.+..++|+|+.+.|++.. ...+.|..++. +++.++.+.-. .+..-.+++..++.++++--.++.+.+
T Consensus 17 l~g~~~e~SGLTy~pd~~tLfaV~--d~~~~i~els~----~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~ 90 (248)
T PF06977_consen 17 LPGILDELSGLTYNPDTGTLFAVQ--DEPGEIYELSL----DGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYI 90 (248)
T ss_dssp -TT--S-EEEEEEETTTTEEEEEE--TTTTEEEEEET----T--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEE
T ss_pred CCCccCCccccEEcCCCCeEEEEE--CCCCEEEEEcC----CCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEE
Confidence 445566799999999766444443 57778877775 45666666533 356788999888877777767899999
Q ss_pred EeccCc------eEEEecc-----cCCCCeeEEEecCCCCEEEEecCCCcee----------------------------
Q psy7433 82 IDLRQR------VIRSRFN-----AHESPVKCLAIDPHEEFFVTGAGDGDIK---------------------------- 122 (213)
Q Consensus 82 wd~~~~------~~~~~~~-----~~~~~i~~~~~~~~~~~l~~~~~~~~i~---------------------------- 122 (213)
+++... .....+. .....+-.++|+|.++.|+++-+..-..
T Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (248)
T PF06977_consen 91 FTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFV 170 (248)
T ss_dssp EEE----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--S
T ss_pred EEEeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeecccccccccccee
Confidence 988432 1112221 2345688999999877766665443211
Q ss_pred eceEEEEEccC-CceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEE
Q psy7433 123 SPVKCLAIDPH-EEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVR 200 (213)
Q Consensus 123 ~~v~~~~~~~~-~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw 200 (213)
..+.++.++|. +++++.+.....|..+| .+++.+..+.-...... ....-.....|++.+++.|+..+..+..+++
T Consensus 171 ~d~S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~g-l~~~~~QpEGIa~d~~G~LYIvsEpNlfy~f 247 (248)
T PF06977_consen 171 RDLSGLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHG-LSKDIPQPEGIAFDPDGNLYIVSEPNLFYRF 247 (248)
T ss_dssp S---EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG--SS---SEEEEEE-TT--EEEEETTTEEEEE
T ss_pred ccccceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccC-cccccCCccEEEECCCCCEEEEcCCceEEEe
Confidence 56788999986 55777888888999999 66766655443221000 0000135788999999998888888776665
|
Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A. |
| >KOG4714|consensus | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.2e-08 Score=70.84 Aligned_cols=148 Identities=15% Similarity=0.241 Sum_probs=85.9
Q ss_pred CCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcC-----CCcEEEEeccCceEEEe
Q psy7433 18 SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGK-----KGDICVIDLRQRVIRSR 92 (213)
Q Consensus 18 ~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----d~~v~iwd~~~~~~~~~ 92 (213)
-+..++++ ..||.+.+.+.+. .......+......-.+.+....++.+.++.. -+..+.|+++..+.+..
T Consensus 100 ~~t~V~~~---~~dg~~~v~s~~~--~~~~~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~~t~~~ 174 (319)
T KOG4714|consen 100 TDNRVCIG---YADGSLAVFSTDK--DLALMSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQDNFYANTLDPIKTLIP 174 (319)
T ss_pred cCCceEec---CCCceEEEEechH--HHhhhhhcccccccccccceeecccEEecCCcceEeeccceeeecccccccccc
Confidence 45567777 5899999999742 22222222211122223334445555555432 12344444443221111
Q ss_pred cccCCCCeeEEEecCCCCEEEEecCCCceeeceEEEEEccCCceEEEecCCCcEEEEEccCCee-eeeecCCCCceeEEE
Q psy7433 93 FNAHESPVKCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHL-LYNFPGEHARSSFFK 171 (213)
Q Consensus 93 ~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~-~~~~~~~~~~~~~~~ 171 (213)
-......+.+++-+|.. .+.+++|+.||.+-+||.|+... ...+..|.
T Consensus 175 ~~~~~~~v~~l~~hp~q------------------------q~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk------- 223 (319)
T KOG4714|consen 175 SKKALDAVTALCSHPAQ------------------------QHLVCCGTDDGIVGLWDARNVAMPVSLLKAHK------- 223 (319)
T ss_pred cccccccchhhhCCccc------------------------ccEEEEecCCCeEEEEEcccccchHHHHHHhh-------
Confidence 11111224444444432 34788999999999999987633 33444554
Q ss_pred ecCCCeEEEEeCC--CCeEEEEecCCcEEEEeCCC
Q psy7433 172 HIGQGVTQLHVDG--GSRLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 172 ~~~~~v~~~~~~~--~~~l~s~~~d~~i~iw~~~~ 204 (213)
.+|..+-|+| ...|++++.||.+-.||-.+
T Consensus 224 ---~~i~eV~FHpk~p~~Lft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 224 ---AEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST 255 (319)
T ss_pred ---hhhhheeccCCCchheeEecCCCcEEEEcCCC
Confidence 7899999998 34799999999999999874
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.85 E-value=7.9e-07 Score=75.80 Aligned_cols=140 Identities=15% Similarity=0.165 Sum_probs=96.7
Q ss_pred eEEEEEeC-CCCeEEEeeccCCCccEEEEeCCCcccccceeeeee---------------ecCCceEEEEecCCCEEE-E
Q psy7433 10 TSDFVFLG-SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVC---------------HDQGASSLVFAPQHQLLI-S 72 (213)
Q Consensus 10 v~~~~~~~-~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~---------------~~~~v~~~~~~~~~~~l~-~ 72 (213)
...++++| ++.++++. +.++.|++||.... . +..+.+ .-.....++++|+++.|+ +
T Consensus 685 P~gVa~dp~~g~LyVad---~~~~~I~v~d~~~g---~-v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVA 757 (1057)
T PLN02919 685 PWDVCFEPVNEKVYIAM---AGQHQIWEYNISDG---V-TRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIA 757 (1057)
T ss_pred CeEEEEecCCCeEEEEE---CCCCeEEEEECCCC---e-EEEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEE
Confidence 46789999 55666665 67899999997422 1 111110 112456799999988554 5
Q ss_pred EcCCCcEEEEeccCceEEEec-------------ccC--------CCCeeEEEecCCCCEEEEecCCCcee---------
Q psy7433 73 AGKKGDICVIDLRQRVIRSRF-------------NAH--------ESPVKCLAIDPHEEFFVTGAGDGDIK--------- 122 (213)
Q Consensus 73 ~~~d~~v~iwd~~~~~~~~~~-------------~~~--------~~~i~~~~~~~~~~~l~~~~~~~~i~--------- 122 (213)
-..++.|++||+.++...... ... -.....+++++++..+++-..++.|+
T Consensus 758 Ds~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v 837 (1057)
T PLN02919 758 DSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRV 837 (1057)
T ss_pred ECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeE
Confidence 556789999999876432110 000 11245889999998888777777765
Q ss_pred ---------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCee
Q psy7433 123 ---------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHL 156 (213)
Q Consensus 123 ---------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~ 156 (213)
..+..++++++|+++++-+.++.|++||+++++.
T Consensus 838 ~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~~~~ 892 (1057)
T PLN02919 838 TTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLNKGEA 892 (1057)
T ss_pred EEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEECCCCcc
Confidence 1467789999999888888999999999987654
|
|
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=98.82 E-value=2e-06 Score=72.22 Aligned_cols=189 Identities=13% Similarity=0.173 Sum_probs=116.2
Q ss_pred EEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeee----eecCCceEEEEecCCCEEEEEcCCCcEEEEeccC
Q psy7433 11 SDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV----CHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQ 86 (213)
Q Consensus 11 ~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~ 86 (213)
.+++|.|+|++||+.-.-.....|.+|.- .+..-..|. .....|..++|++++..||..-.|. |.+|-..+
T Consensus 260 ~~l~WrPsG~lIA~~q~~~~~~~VvFfEr----NGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~N 334 (928)
T PF04762_consen 260 GALSWRPSGNLIASSQRLPDRHDVVFFER----NGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSN 334 (928)
T ss_pred CCccCCCCCCEEEEEEEcCCCcEEEEEec----CCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeC
Confidence 36799999999999832112456777774 332222222 3356789999999999999977654 99998876
Q ss_pred ce--EEEeccc-CCCCeeEEEecCC-CCEEEEecCCCcee----------------------------------------
Q psy7433 87 RV--IRSRFNA-HESPVKCLAIDPH-EEFFVTGAGDGDIK---------------------------------------- 122 (213)
Q Consensus 87 ~~--~~~~~~~-~~~~i~~~~~~~~-~~~l~~~~~~~~i~---------------------------------------- 122 (213)
-. ..+.+.. ....+..+.|+|. ...|.....++.+.
T Consensus 335 YHWYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~~~~~~~v~~s~~~~~~D~g~vaVIDG~~lllTpf~~a~V 414 (928)
T PF04762_consen 335 YHWYLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYEIYDFAWDVSRSPGSSPNDNGTVAVIDGNKLLLTPFRRAVV 414 (928)
T ss_pred CEEEEEEEEEccCCCCCCceEECCCCCCEEEEEecCCcEEEEEEEEEEEecCCCCccCceEEEEEeCCeEEEecccccCC
Confidence 43 2222321 2233455889984 34566666545442
Q ss_pred ------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeee--------eeecCCCCceeEEEecCCCeEEEEe
Q psy7433 123 ------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLL--------YNFPGEHARSSFFKHIGQGVTQLHV 182 (213)
Q Consensus 123 ------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~--------~~~~~~~~~~~~~~~~~~~v~~~~~ 182 (213)
.+|.+++|++++..+++-..||.|.+|........ ..+................+..+.|
T Consensus 415 PPPMs~~~l~~~~~v~~vaf~~~~~~~avl~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (928)
T PF04762_consen 415 PPPMSSYELELPSPVNDVAFSPSNSRFAVLTSDGSLSIYEWDLKNMWSVKPPKLLSSISLDSMDISDSELPLGSLRQLAW 494 (928)
T ss_pred CchHhceEEcCCCCcEEEEEeCCCCeEEEEECCCCEEEEEecCCCcccccCcchhhhcccccccccccccccccEEEEEE
Confidence 88999999999988999999999999986432211 1111100000001111256788888
Q ss_pred CCCCe-EEEEec---CCcEEEEeCCC
Q psy7433 183 DGGSR-LFSCGA---DGSMKVRQLPD 204 (213)
Q Consensus 183 ~~~~~-l~s~~~---d~~i~iw~~~~ 204 (213)
..++. ++.... ...+.++++..
T Consensus 495 ~~~~~~~~~~~~~~~~~~i~~~~~~~ 520 (928)
T PF04762_consen 495 LNDDTLLVLSDSDSNQSKIVLVDIDD 520 (928)
T ss_pred eCCCEEEEEEecCcccceEEEEEecc
Confidence 76554 333333 25778887743
|
|
| >KOG4190|consensus | Back alignment and domain information |
|---|
Probab=98.81 E-value=2.8e-08 Score=76.12 Aligned_cols=154 Identities=13% Similarity=0.263 Sum_probs=112.1
Q ss_pred eeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCc-------eEEEecccCCCCeeEEEecCCCCEEEEecCCCc
Q psy7433 48 VQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR-------VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGD 120 (213)
Q Consensus 48 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~ 120 (213)
+..+.+|...|+.++--.+.+.+++++.|++|++|.++.. .+..+++.|..+|..+-|..+.+.++++...-.
T Consensus 728 L~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~ScD~giH 807 (1034)
T KOG4190|consen 728 LCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASCDGGIH 807 (1034)
T ss_pred eecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeeccCcce
Confidence 4456688888998888778889999999999999998642 355677889999999999999888887654433
Q ss_pred ee--------------------eceEEEEEccCCceEEEe-cCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEE
Q psy7433 121 IK--------------------SPVKCLAIDPHEEFFVTG-AGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQ 179 (213)
Q Consensus 121 i~--------------------~~v~~~~~~~~~~~l~~~-~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 179 (213)
+. ..|.|+. +-+...+++| +...+|+++|.|.++-...++....+.. ...+.+
T Consensus 808 lWDPFigr~Laq~~dapk~~a~~~ikcl~-nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~P-----na~~R~ 881 (1034)
T KOG4190|consen 808 LWDPFIGRLLAQMEDAPKEGAGGNIKCLE-NVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGP-----NALTRA 881 (1034)
T ss_pred eecccccchhHhhhcCcccCCCceeEecc-cCcchheeeeccchhhheeeecccccceeeEEeccCCCC-----chheeE
Confidence 32 2222221 1123444444 7788999999998876666554321110 156888
Q ss_pred EEeCC-CCeEEEEecCCcEEEEeCCCCcc
Q psy7433 180 LHVDG-GSRLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 180 ~~~~~-~~~l~s~~~d~~i~iw~~~~~~~ 207 (213)
++..| ++.++++-..|.|.+.|.++++.
T Consensus 882 iaVa~~GN~lAa~LSnGci~~LDaR~G~v 910 (1034)
T KOG4190|consen 882 IAVADKGNKLAAALSNGCIAILDARNGKV 910 (1034)
T ss_pred EEeccCcchhhHHhcCCcEEEEecCCCce
Confidence 99987 56799999999999999999863
|
|
| >KOG4714|consensus | Back alignment and domain information |
|---|
Probab=98.80 E-value=4.6e-08 Score=68.00 Aligned_cols=74 Identities=16% Similarity=0.239 Sum_probs=61.7
Q ss_pred ceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec-CCCEEEEEcCCCcEEEEeccC
Q psy7433 9 ITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP-QHQLLISAGKKGDICVIDLRQ 86 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~iwd~~~ 86 (213)
.|.+++-+|..+.++.+| +.||.+-+||.++. ..+...+..|+.++..+-|+| ++..|++++.||.+-.||..+
T Consensus 181 ~v~~l~~hp~qq~~v~cg--t~dg~~~l~d~rn~--~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 181 AVTALCSHPAQQHLVCCG--TDDGIVGLWDARNV--AMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST 255 (319)
T ss_pred cchhhhCCcccccEEEEe--cCCCeEEEEEcccc--cchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCC
Confidence 488899999666666665 79999999999643 445566778999999999999 678999999999999999865
|
|
| >KOG3914|consensus | Back alignment and domain information |
|---|
Probab=98.80 E-value=5.2e-08 Score=71.32 Aligned_cols=87 Identities=18% Similarity=0.382 Sum_probs=68.9
Q ss_pred eeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEec-ccCCCCeeEEEecCCCCEEEEecCCCceeeceEEE
Q psy7433 50 AFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRF-NAHESPVKCLAIDPHEEFFVTGAGDGDIKSPVKCL 128 (213)
Q Consensus 50 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~ 128 (213)
..-+|-.-+..++|+||++.|+++..|..|++-.......+..+ -+|...|..++.-++
T Consensus 146 ~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~-------------------- 205 (390)
T KOG3914|consen 146 PILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDN-------------------- 205 (390)
T ss_pred hhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccC--------------------
Confidence 34468888999999999999999999999999777655545444 357777777776642
Q ss_pred EEccCCceEEEecCCCcEEEEEccCCeeeeeecC
Q psy7433 129 AIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPG 162 (213)
Q Consensus 129 ~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~ 162 (213)
..|++|+.|+++++||+++++.+..+..
T Consensus 206 ------~~LlS~sGD~tlr~Wd~~sgk~L~t~dl 233 (390)
T KOG3914|consen 206 ------YLLLSGSGDKTLRLWDITSGKLLDTCDL 233 (390)
T ss_pred ------ceeeecCCCCcEEEEecccCCcccccch
Confidence 4689999999999999999987755543
|
|
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=98.80 E-value=9.2e-06 Score=58.35 Aligned_cols=155 Identities=16% Similarity=0.172 Sum_probs=99.8
Q ss_pred eEEEEEe-CCCCeEEEeeccCCCccEEEEeCCCcccccceeeee--e-ecCCceEEEEecCCCEEEEEcCC--------C
Q psy7433 10 TSDFVFL-GSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV--C-HDQGASSLVFAPQHQLLISAGKK--------G 77 (213)
Q Consensus 10 v~~~~~~-~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~--~-~~~~v~~~~~~~~~~~l~~~~~d--------~ 77 (213)
...+.+. +++.++++. .+.+.++|..+. +.+.+.... . .....+.+++.|+|++.++.... |
T Consensus 42 ~~G~~~~~~~g~l~v~~-----~~~~~~~d~~~g-~~~~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g 115 (246)
T PF08450_consen 42 PNGMAFDRPDGRLYVAD-----SGGIAVVDPDTG-KVTVLADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPG 115 (246)
T ss_dssp EEEEEEECTTSEEEEEE-----TTCEEEEETTTT-EEEEEEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSE
T ss_pred CceEEEEccCCEEEEEE-----cCceEEEecCCC-cEEEEeeccCCCcccCCCceEEEcCCCCEEEEecCCCcccccccc
Confidence 5667777 676666665 355566687432 112222221 1 23457889999999977765433 4
Q ss_pred cEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEe-cCCCcee------------------------eceEEEEEcc
Q psy7433 78 DICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTG-AGDGDIK------------------------SPVKCLAIDP 132 (213)
Q Consensus 78 ~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~~~~i~------------------------~~v~~~~~~~ 132 (213)
.|..++.. ++...... .-.....++|+|+++.|+++ +..+.+. ..+-.+++++
T Consensus 116 ~v~~~~~~-~~~~~~~~-~~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~ 193 (246)
T PF08450_consen 116 SVYRIDPD-GKVTVVAD-GLGFPNGIAFSPDGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDS 193 (246)
T ss_dssp EEEEEETT-SEEEEEEE-EESSEEEEEEETTSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBT
T ss_pred ceEEECCC-CeEEEEec-CcccccceEECCcchheeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcC
Confidence 57777766 44333332 34557899999999877644 4455443 1366789999
Q ss_pred CCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeC
Q psy7433 133 HEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVD 183 (213)
Q Consensus 133 ~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 183 (213)
+|++.++....+.|.++|.+ ++.+..+.... ..+++++|.
T Consensus 194 ~G~l~va~~~~~~I~~~~p~-G~~~~~i~~p~----------~~~t~~~fg 233 (246)
T PF08450_consen 194 DGNLWVADWGGGRIVVFDPD-GKLLREIELPV----------PRPTNCAFG 233 (246)
T ss_dssp TS-EEEEEETTTEEEEEETT-SCEEEEEE-SS----------SSEEEEEEE
T ss_pred CCCEEEEEcCCCEEEEECCC-ccEEEEEcCCC----------CCEEEEEEE
Confidence 99988887788999999987 88888777664 468999994
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >KOG0309|consensus | Back alignment and domain information |
|---|
Probab=98.78 E-value=2.7e-08 Score=78.38 Aligned_cols=159 Identities=16% Similarity=0.269 Sum_probs=113.5
Q ss_pred eEEEEEeCCC---CeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCC-CEEEEEcCCCcEEEEecc
Q psy7433 10 TSDFVFLGSC---SLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQH-QLLISAGKKGDICVIDLR 85 (213)
Q Consensus 10 v~~~~~~~~~---~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~iwd~~ 85 (213)
|-...|+|.. ..+++. ....-.+|++..+......-.+.+|...++.+-|+|+. ..+++++.|..+..||++
T Consensus 70 vad~qws~h~a~~~wiVst----s~qkaiiwnlA~ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~r 145 (1081)
T KOG0309|consen 70 VADVQWSPHPAKPYWIVST----SNQKAIIWNLAKSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMR 145 (1081)
T ss_pred hcceecccCCCCceeEEec----CcchhhhhhhhcCCccceEEEEecCccceeccccCCCCCcceeeccccccceeeecc
Confidence 5556777732 345555 56667899986555555556677899999999999954 688999999999999998
Q ss_pred Cc-eEEEecccCCCCeeEEEecCCCCEEEEecCCCceeeceEEEEEccCCceEEEecCCCcEEEEEccCC-eeeeeecCC
Q psy7433 86 QR-VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGN-HLLYNFPGE 163 (213)
Q Consensus 86 ~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~-~~~~~~~~~ 163 (213)
+. .++..+..-......+.|+. ....+++.+..+.|.+||++.+ .++..++++
T Consensus 146 Sp~~p~ys~~~w~s~asqVkwny-------------------------k~p~vlasshg~~i~vwd~r~gs~pl~s~K~~ 200 (1081)
T KOG0309|consen 146 SPHRPFYSTSSWRSAASQVKWNY-------------------------KDPNVLASSHGNDIFVWDLRKGSTPLCSLKGH 200 (1081)
T ss_pred CCCcceeeeecccccCceeeecc-------------------------cCcchhhhccCCceEEEeccCCCcceEEeccc
Confidence 75 33443333333444455543 3334555556678999999754 567778776
Q ss_pred CCceeEEEecCCCeEEEEeCC--CCeEEEEecCCcEEEEeCCCCcc
Q psy7433 164 HARSSFFKHIGQGVTQLHVDG--GSRLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 164 ~~~~~~~~~~~~~v~~~~~~~--~~~l~s~~~d~~i~iw~~~~~~~ 207 (213)
. ..|+.++|.. ...+.+.+.|+.|++||..+...
T Consensus 201 v----------s~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~ 236 (1081)
T KOG0309|consen 201 V----------SSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTT 236 (1081)
T ss_pred c----------eeeehHHHhhhhhhhhcccCCCCceeeeccccccc
Confidence 5 6788888875 45689999999999999986543
|
|
| >KOG1275|consensus | Back alignment and domain information |
|---|
Probab=98.78 E-value=8.4e-08 Score=77.18 Aligned_cols=125 Identities=20% Similarity=0.297 Sum_probs=97.9
Q ss_pred CCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCC---------CcEEEEeccCc
Q psy7433 17 GSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKK---------GDICVIDLRQR 87 (213)
Q Consensus 17 ~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------~~v~iwd~~~~ 87 (213)
.+++++.+| +..|+|.+-|. ...+.++++.+|.+.+..+ +-+|++|++++.. .-|++||++..
T Consensus 185 ~Nnr~lf~G---~t~G~V~LrD~---~s~~~iht~~aHs~siSDf--Dv~GNlLitCG~S~R~~~l~~D~FvkVYDLRmm 256 (1118)
T KOG1275|consen 185 YNNRNLFCG---DTRGTVFLRDP---NSFETIHTFDAHSGSISDF--DVQGNLLITCGYSMRRYNLAMDPFVKVYDLRMM 256 (1118)
T ss_pred ecCcEEEee---cccceEEeecC---CcCceeeeeeccccceeee--eccCCeEEEeecccccccccccchhhhhhhhhh
Confidence 366788887 78999999998 6788999999999988664 4579999999854 45899999988
Q ss_pred eEEEecccCCCCeeEEEecCC-CCEEEEecCCCcee---------------------eceEEEEEccCCceEEEecCCCc
Q psy7433 88 VIRSRFNAHESPVKCLAIDPH-EEFFVTGAGDGDIK---------------------SPVKCLAIDPHEEFFVTGAGDGD 145 (213)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~~~~i~---------------------~~v~~~~~~~~~~~l~~~~~dg~ 145 (213)
+.+..+.-+.++ .-+.|.|. ...+++++..|... ..+..++++++++.++.|..+|.
T Consensus 257 ral~PI~~~~~P-~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~ 335 (1118)
T KOG1275|consen 257 RALSPIQFPYGP-QFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGH 335 (1118)
T ss_pred hccCCcccccCc-hhhhhcccccceEEEEecccceeeccccccCCCccceeEEccCCCcceeEEecCCCceEEEecccCc
Confidence 776666544443 45666774 34566666666553 55899999999999999999999
Q ss_pred EEEEE
Q psy7433 146 IKVWS 150 (213)
Q Consensus 146 i~v~d 150 (213)
|.+|-
T Consensus 336 v~~wa 340 (1118)
T KOG1275|consen 336 VNLWA 340 (1118)
T ss_pred Eeeec
Confidence 99997
|
|
| >KOG1912|consensus | Back alignment and domain information |
|---|
Probab=98.75 E-value=6e-07 Score=71.42 Aligned_cols=156 Identities=19% Similarity=0.266 Sum_probs=117.0
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCC------------CEEEEEcC
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQH------------QLLISAGK 75 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~------------~~l~~~~~ 75 (213)
..-.++.|+|.| +||.+ ....|.+-|. .+.+.+..+..|...|+.+.|.|.. -+|+++..
T Consensus 16 sN~~A~Dw~~~G-LiAyg----shslV~VVDs---~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~ 87 (1062)
T KOG1912|consen 16 SNRNAADWSPSG-LIAYG----SHSLVSVVDS---RSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADI 87 (1062)
T ss_pred ccccccccCccc-eEEEe----cCceEEEEeh---hhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccc
Confidence 346788999877 66666 4678999998 5777888888899999999998732 15778888
Q ss_pred CCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCceeeceEEEEEccCC-ceEEEecCCCcEEEEEccCC
Q psy7433 76 KGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPHE-EFFVTGAGDGDIKVWSLSGN 154 (213)
Q Consensus 76 d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~~-~~l~~~~~dg~i~v~d~~~~ 154 (213)
.|.|.+||...+..+..+..+.+++..++|-|.. ++. .+|++-.....+.+|+..+|
T Consensus 88 ~GrIil~d~~~~s~~~~l~~~~~~~qdl~W~~~r----------------------d~Srd~LlaIh~ss~lvLwntdtG 145 (1062)
T KOG1912|consen 88 SGRIILVDFVLASVINWLSHSNDSVQDLCWVPAR----------------------DDSRDVLLAIHGSSTLVLWNTDTG 145 (1062)
T ss_pred cCcEEEEEehhhhhhhhhcCCCcchhheeeeecc----------------------CcchheeEEecCCcEEEEEEccCC
Confidence 9999999999988888888888889888887632 123 35666666778999999999
Q ss_pred eeeeeecCCCCceeEEEecCCCeEEEEeCC-CC-eEEEEecCCcEEEEeCC
Q psy7433 155 HLLYNFPGEHARSSFFKHIGQGVTQLHVDG-GS-RLFSCGADGSMKVRQLP 203 (213)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~-~l~s~~~d~~i~iw~~~ 203 (213)
+..-.....+ ....|+.++| +. .+..-+..|.+-+-+.-
T Consensus 146 ~k~Wk~~ys~----------~iLs~f~~DPfd~rh~~~l~s~g~vl~~~~l 186 (1062)
T KOG1912|consen 146 EKFWKYDYSH----------EILSCFRVDPFDSRHFCVLGSKGFVLSCKDL 186 (1062)
T ss_pred ceeeccccCC----------cceeeeeeCCCCcceEEEEccCceEEEEecc
Confidence 9887776654 4566678877 33 46666666666665543
|
|
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=98.72 E-value=3e-05 Score=55.74 Aligned_cols=171 Identities=19% Similarity=0.222 Sum_probs=106.9
Q ss_pred EEEEeC-CCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEe-cCCCEEEEEcCCCcEEEEeccCceE
Q psy7433 12 DFVFLG-SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFA-PQHQLLISAGKKGDICVIDLRQRVI 89 (213)
Q Consensus 12 ~~~~~~-~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~d~~v~iwd~~~~~~ 89 (213)
+..|.+ ++.++++- -..+.|..|+.. .. ....+. ......+++. +++ .|+.+... .+.++|..+++.
T Consensus 4 gp~~d~~~g~l~~~D---~~~~~i~~~~~~---~~-~~~~~~--~~~~~G~~~~~~~g-~l~v~~~~-~~~~~d~~~g~~ 72 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVD---IPGGRIYRVDPD---TG-EVEVID--LPGPNGMAFDRPDG-RLYVADSG-GIAVVDPDTGKV 72 (246)
T ss_dssp EEEEETTTTEEEEEE---TTTTEEEEEETT---TT-EEEEEE--SSSEEEEEEECTTS-EEEEEETT-CEEEEETTTTEE
T ss_pred ceEEECCCCEEEEEE---cCCCEEEEEECC---CC-eEEEEe--cCCCceEEEEccCC-EEEEEEcC-ceEEEecCCCcE
Confidence 568888 66676666 578999999973 22 222222 2227778888 565 45555444 455669988854
Q ss_pred EEeccc-----CCCCeeEEEecCCCCEEEEecCC--------Ccee---------------eceEEEEEccCCceEE-Ee
Q psy7433 90 RSRFNA-----HESPVKCLAIDPHEEFFVTGAGD--------GDIK---------------SPVKCLAIDPHEEFFV-TG 140 (213)
Q Consensus 90 ~~~~~~-----~~~~i~~~~~~~~~~~l~~~~~~--------~~i~---------------~~v~~~~~~~~~~~l~-~~ 140 (213)
...... .....+.+++.|+|+..++.... +.+. ...+.++|+|+++.|+ +-
T Consensus 73 ~~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~~~~~~~~~~~~~pNGi~~s~dg~~lyv~d 152 (246)
T PF08450_consen 73 TVLADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPDGKVTVVADGLGFPNGIAFSPDGKTLYVAD 152 (246)
T ss_dssp EEEEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETTSEEEEEEEEESSEEEEEEETTSSEEEEEE
T ss_pred EEEeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCCCeEEEEecCcccccceEECCcchheeecc
Confidence 433322 23457899999999977765543 2232 5678899999998655 66
Q ss_pred cCCCcEEEEEccCCee-------eeeecCCCCceeEEEecCCCeEEEEeCCCCeEE-EEecCCcEEEEeCC
Q psy7433 141 AGDGDIKVWSLSGNHL-------LYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLF-SCGADGSMKVRQLP 203 (213)
Q Consensus 141 ~~dg~i~v~d~~~~~~-------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~-s~~~d~~i~iw~~~ 203 (213)
+..+.|..+++..... ...+.... +....++++.++.|. +.-..+.|.+++-.
T Consensus 153 s~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~----------g~pDG~~vD~~G~l~va~~~~~~I~~~~p~ 213 (246)
T PF08450_consen 153 SFNGRIWRFDLDADGGELSNRRVFIDFPGGP----------GYPDGLAVDSDGNLWVADWGGGRIVVFDPD 213 (246)
T ss_dssp TTTTEEEEEEEETTTCCEEEEEEEEE-SSSS----------CEEEEEEEBTTS-EEEEEETTTEEEEEETT
T ss_pred cccceeEEEeccccccceeeeeeEEEcCCCC----------cCCCcceEcCCCCEEEEEcCCCEEEEECCC
Confidence 7788899999853221 11122211 247889998866654 44467889999876
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >KOG1008|consensus | Back alignment and domain information |
|---|
Probab=98.70 E-value=1.9e-08 Score=77.90 Aligned_cols=187 Identities=13% Similarity=0.195 Sum_probs=125.3
Q ss_pred cCceEEEEEeCCCC--eEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec-CCCEEEEEc----CCCcE
Q psy7433 7 NKITSDFVFLGSCS--LVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP-QHQLLISAG----KKGDI 79 (213)
Q Consensus 7 ~~~v~~~~~~~~~~--~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~----~d~~v 79 (213)
...+.|+++.-+.+ +++.| ..+|.|-+-.++.+... .....+++....++++|++ |.+.||+|- .|..+
T Consensus 56 tqy~kcva~~y~~d~cIlavG---~atG~I~l~s~r~~hdS-s~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~ 131 (783)
T KOG1008|consen 56 TQYVKCVASFYGNDRCILAVG---SATGNISLLSVRHPHDS-SAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSL 131 (783)
T ss_pred CCCceeehhhcCCchhhhhhc---cccCceEEeecCCcccc-cceecccccccccccccccccHHHHHhhhhhhcccCCc
Confidence 45677887766433 55555 78899999998643322 2334556778899999998 667788774 45779
Q ss_pred EEEeccCc--eEE--Eeccc-CCCCeeEEEecCCCCEEEEecCCCcee----------------eceEEEEEcc-CCceE
Q psy7433 80 CVIDLRQR--VIR--SRFNA-HESPVKCLAIDPHEEFFVTGAGDGDIK----------------SPVKCLAIDP-HEEFF 137 (213)
Q Consensus 80 ~iwd~~~~--~~~--~~~~~-~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------~~v~~~~~~~-~~~~l 137 (213)
.|||+.++ .+. ..+.. ......+++|..+.+.+++|.....+. ..+..+..+| .+.|+
T Consensus 132 ~Iwdi~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~svnTk~vqG~tVdp~~~nY~ 211 (783)
T KOG1008|consen 132 KIWDINSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVSSVNTKYVQGITVDPFSPNYF 211 (783)
T ss_pred cceecccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhhhhhhhhhhhhhhcccceecCCCCCce
Confidence 99999876 221 12222 344556888888888888888776665 3567788888 66677
Q ss_pred EEecCCCcEEEEE-ccCCee-eeeecCCCCceeEEEecCCCeEEEEeCC--CCeEEEEecC-CcEEEEeCCC
Q psy7433 138 VTGAGDGDIKVWS-LSGNHL-LYNFPGEHARSSFFKHIGQGVTQLHVDG--GSRLFSCGAD-GSMKVRQLPD 204 (213)
Q Consensus 138 ~~~~~dg~i~v~d-~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~l~s~~~d-~~i~iw~~~~ 204 (213)
++-. ||.|.+|| .++-+. +..+. +..... ...+..++|.| .+.+++...| +.|+++++..
T Consensus 212 cs~~-dg~iAiwD~~rnienpl~~i~-~~~N~~-----~~~l~~~aycPtrtglla~l~RdS~tIrlydi~~ 276 (783)
T KOG1008|consen 212 CSNS-DGDIAIWDTYRNIENPLQIIL-RNENKK-----PKQLFALAYCPTRTGLLAVLSRDSITIRLYDICV 276 (783)
T ss_pred eccc-cCceeeccchhhhccHHHHHh-hCCCCc-----ccceeeEEeccCCcchhhhhccCcceEEEecccc
Confidence 6665 99999999 444332 22222 221000 13588999998 4677777755 6899998864
|
|
| >KOG0882|consensus | Back alignment and domain information |
|---|
Probab=98.68 E-value=2.9e-07 Score=68.74 Aligned_cols=198 Identities=17% Similarity=0.183 Sum_probs=130.9
Q ss_pred ccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcC-CCcEEEEec
Q psy7433 6 HNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGK-KGDICVIDL 84 (213)
Q Consensus 6 h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~v~iwd~ 84 (213)
|...|+-+.- .-.+++.++ +.||.++.|.-....--..+..+..|...+.+++.+-++.++.+.+. |..++++|+
T Consensus 8 hrd~i~hv~~-tka~fiiqA---SlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDv 83 (558)
T KOG0882|consen 8 HRDVITHVFP-TKAKFIIQA---SLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDV 83 (558)
T ss_pred ccceeeeEee-ehhheEEee---ecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEe
Confidence 5566666543 356788888 89999999985322223455666778889999999999999999777 999999999
Q ss_pred cCceEEEecc------------cCCCCeeEEEecC--CCCEEEEec-CCC--------ceeeceEEEEEccCCceEEEec
Q psy7433 85 RQRVIRSRFN------------AHESPVKCLAIDP--HEEFFVTGA-GDG--------DIKSPVKCLAIDPHEEFFVTGA 141 (213)
Q Consensus 85 ~~~~~~~~~~------------~~~~~i~~~~~~~--~~~~l~~~~-~~~--------~i~~~v~~~~~~~~~~~l~~~~ 141 (213)
.+-..+..++ .....+..++.+. ++..++.-+ .+. ....+|.++.+++.+.-+++..
T Consensus 84 En~DminmiKL~~lPg~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD 163 (558)
T KOG0882|consen 84 ENFDMINMIKLVDLPGFAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSID 163 (558)
T ss_pred eccchhhhcccccCCCceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceeecc
Confidence 8754332221 1222333444432 222222211 111 0118999999999999999999
Q ss_pred CCCcEEEEEccC------CeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCccc
Q psy7433 142 GDGDIKVWSLSG------NHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 142 ~dg~i~v~d~~~------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
..|.|.-|.... .+....++... ....+........++.++|++ .+.+-+.|..|+++++.+++..
T Consensus 164 ~~gmVEyWs~e~~~qfPr~~l~~~~K~eT-dLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklv 236 (558)
T KOG0882|consen 164 ISGMVEYWSAEGPFQFPRTNLNFELKHET-DLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLV 236 (558)
T ss_pred ccceeEeecCCCcccCccccccccccccc-hhhcccccccCccceEEccccCcccccCcccEEEEEEeccchhh
Confidence 999999998762 11222222111 111123333578899999965 5888899999999999988543
|
|
| >COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.9e-07 Score=66.79 Aligned_cols=185 Identities=15% Similarity=0.245 Sum_probs=112.4
Q ss_pred ccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeec-----CCceEEEEecC-CCEEEEEcCCC
Q psy7433 4 QCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHD-----QGASSLVFAPQ-HQLLISAGKKG 77 (213)
Q Consensus 4 ~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~-~~~l~~~~~d~ 77 (213)
.+|.-.|+++.|+.|...++++ .|-.|.+|+++.....-.+..++.|+ .-|++..|+|. .+.+...+..|
T Consensus 169 NaH~yhiNSiS~NsD~et~lSa----DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG 244 (460)
T COG5170 169 NAHPYHINSISFNSDKETLLSA----DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKG 244 (460)
T ss_pred ccceeEeeeeeecCchheeeec----cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCC
Confidence 4678889999999999999987 78999999985433323333344443 34788899994 35666667789
Q ss_pred cEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCceeeceEEEEEccCCceEEEecCCCcEEEEEcc-CCee
Q psy7433 78 DICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLS-GNHL 156 (213)
Q Consensus 78 ~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~-~~~~ 156 (213)
.|++-|+++....- ...........+...-+. ..+...|..+.|+++|+++++-+.. ++++||.+ ...+
T Consensus 245 ~Ikl~DlRq~alcd----n~~klfe~~~D~v~~~ff-----~eivsSISD~kFs~ngryIlsRdyl-tvkiwDvnm~k~p 314 (460)
T COG5170 245 EIKLNDLRQSALCD----NSKKLFELTIDGVDVDFF-----EEIVSSISDFKFSDNGRYILSRDYL-TVKIWDVNMAKNP 314 (460)
T ss_pred cEEehhhhhhhhcc----CchhhhhhccCcccchhH-----HHHhhhhcceEEcCCCcEEEEeccc-eEEEEecccccCC
Confidence 99999998643211 000111111111111110 0122568889999999988877654 89999997 4456
Q ss_pred eeeecCCCCceeEE--EecCCCe---EEEEeCC-CCeEEEEecCCcEEEEeC
Q psy7433 157 LYNFPGEHARSSFF--KHIGQGV---TQLHVDG-GSRLFSCGADGSMKVRQL 202 (213)
Q Consensus 157 ~~~~~~~~~~~~~~--~~~~~~v---~~~~~~~-~~~l~s~~~d~~i~iw~~ 202 (213)
+.+++.|....... ......| ..+.|+. +..+++|+..+..-+|-.
T Consensus 315 ikTi~~h~~l~~~l~d~YEnDaifdkFeisfSgd~~~v~sgsy~NNfgiyp~ 366 (460)
T COG5170 315 IKTIPMHCDLMDELNDVYENDAIFDKFEISFSGDDKHVLSGSYSNNFGIYPT 366 (460)
T ss_pred ceeechHHHHHHHHHhhhhccceeeeEEEEecCCcccccccccccceeeecc
Confidence 77776553211000 0000111 2345554 345888888777777763
|
|
| >KOG0882|consensus | Back alignment and domain information |
|---|
Probab=98.65 E-value=2.4e-07 Score=69.15 Aligned_cols=153 Identities=14% Similarity=0.110 Sum_probs=108.2
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec-CCC---EEE-EEcCCC
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP-QHQ---LLI-SAGKKG 77 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~---~l~-~~~~d~ 77 (213)
+..|...|.+++.+-++.++.+.+ ..|..++++|+++ ...+..++.. .....+.|.. .|. .++ +.-.++
T Consensus 49 FraHL~~I~sl~~S~dg~L~~Sv~--d~Dhs~KvfDvEn---~DminmiKL~-~lPg~a~wv~skGd~~s~IAVs~~~sg 122 (558)
T KOG0882|consen 49 FRAHLGVILSLAVSYDGWLFRSVE--DPDHSVKVFDVEN---FDMINMIKLV-DLPGFAEWVTSKGDKISLIAVSLFKSG 122 (558)
T ss_pred hHHHHHHHHhhhccccceeEeecc--CcccceeEEEeec---cchhhhcccc-cCCCceEEecCCCCeeeeEEeecccCC
Confidence 456778888999999999999973 3499999999943 3332222211 1112233322 231 333 334678
Q ss_pred cEEEEeccCce--EEEecccCCCCeeEEEecCCCCEEEEecCCCcee--------------------------------e
Q psy7433 78 DICVIDLRQRV--IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK--------------------------------S 123 (213)
Q Consensus 78 ~v~iwd~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~--------------------------------~ 123 (213)
.+.++|-.... ....-.-|..+|.++.++|.+..+++....|.+. .
T Consensus 123 ~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt 202 (558)
T KOG0882|consen 123 KIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKT 202 (558)
T ss_pred CcEEECCcCCcCccceecccccCceEEEEeeccccceeeccccceeEeecCCCcccCccccccccccccchhhccccccc
Confidence 99999976542 2333345888999999999998888887666653 6
Q ss_pred ceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeec
Q psy7433 124 PVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFP 161 (213)
Q Consensus 124 ~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~ 161 (213)
...++.|+|++..+.+-+.|..|+++++++++..+.+.
T Consensus 203 ~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqeiD 240 (558)
T KOG0882|consen 203 EPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEID 240 (558)
T ss_pred CccceEEccccCcccccCcccEEEEEEeccchhhhhhh
Confidence 78999999999999999999999999999987665543
|
|
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=98.64 E-value=4.4e-05 Score=55.52 Aligned_cols=189 Identities=19% Similarity=0.187 Sum_probs=112.8
Q ss_pred EEEEEeC-CCCeEEEeeccCCC-ccEEEEeCCCcccccceeeeeeecCC--ceEEEEecCCCEEEEEc-----CCCcEEE
Q psy7433 11 SDFVFLG-SCSLVATAGHSSES-KNVCLWDSLLPQKKALVQAFVCHDQG--ASSLVFAPQHQLLISAG-----KKGDICV 81 (213)
Q Consensus 11 ~~~~~~~-~~~~l~~~g~~s~~-~~i~iwd~~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~-----~d~~v~i 81 (213)
-.++.+| ....++.+ ..- ....+||.+ +++....+....+. ----.||++|++|++.- ..|.|-+
T Consensus 8 H~~a~~p~~~~avafa---RRPG~~~~v~D~~---~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgV 81 (305)
T PF07433_consen 8 HGVAAHPTRPEAVAFA---RRPGTFALVFDCR---TGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGV 81 (305)
T ss_pred cceeeCCCCCeEEEEE---eCCCcEEEEEEcC---CCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEE
Confidence 3577788 44455555 333 457788873 44444333322111 11257999999999864 3488999
Q ss_pred Eecc-CceEEEecccCCCCeeEEEecCCCCEEEEecCC-------Ccee-------------------------------
Q psy7433 82 IDLR-QRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGD-------GDIK------------------------------- 122 (213)
Q Consensus 82 wd~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~-------~~i~------------------------------- 122 (213)
||.. +-+.+.++..+.-....+.+.|+++.|+++... +..+
T Consensus 82 yd~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~ 161 (305)
T PF07433_consen 82 YDAARGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLH 161 (305)
T ss_pred EECcCCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCcccc
Confidence 9998 568888898888888899999999877776331 1111
Q ss_pred -eceEEEEEccCCceEEEecCCCcE-----EEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eE-EEEecC
Q psy7433 123 -SPVKCLAIDPHEEFFVTGAGDGDI-----KVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RL-FSCGAD 194 (213)
Q Consensus 123 -~~v~~~~~~~~~~~l~~~~~dg~i-----~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l-~s~~~d 194 (213)
..+..++++++|..++..-..|.- -+.-.+.++.+..+...... .....+.+-+|++++++ .+ +|+=..
T Consensus 162 ~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g~~~~~~~~p~~~---~~~l~~Y~gSIa~~~~g~~ia~tsPrG 238 (305)
T PF07433_consen 162 QLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRGGALRLLPAPEEQ---WRRLNGYIGSIAADRDGRLIAVTSPRG 238 (305)
T ss_pred ccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcCCCcceeccCChHH---HHhhCCceEEEEEeCCCCEEEEECCCC
Confidence 356667777776654444332210 11111222222222222110 11122689999999875 44 444467
Q ss_pred CcEEEEeCCCCccc
Q psy7433 195 GSMKVRQLPDRDAV 208 (213)
Q Consensus 195 ~~i~iw~~~~~~~~ 208 (213)
+.+.+||..++..+
T Consensus 239 g~~~~~d~~tg~~~ 252 (305)
T PF07433_consen 239 GRVAVWDAATGRLL 252 (305)
T ss_pred CEEEEEECCCCCEe
Confidence 79999999988654
|
|
| >KOG1832|consensus | Back alignment and domain information |
|---|
Probab=98.64 E-value=7.9e-08 Score=77.44 Aligned_cols=150 Identities=14% Similarity=0.157 Sum_probs=113.2
Q ss_pred cceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee---
Q psy7433 46 ALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK--- 122 (213)
Q Consensus 46 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~--- 122 (213)
+..+.+..|....+|++|+.+.+.|+.|+..|.|++|++.+|.......+|+.+++.+.-+.+|..+++.+.-..-.
T Consensus 1092 r~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaL 1171 (1516)
T KOG1832|consen 1092 RSWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSAL 1171 (1516)
T ss_pred ccchhhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHH
Confidence 44556677888999999999999999999999999999999999999999999999999999999888776654421
Q ss_pred -------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEE
Q psy7433 123 -------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLF 189 (213)
Q Consensus 123 -------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~ 189 (213)
..-.++.|+...+.-+.|+......+||++++.++.++-....... ..-+++.|+|...|+
T Consensus 1172 W~~~s~~~~~Hsf~ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~------y~~n~a~FsP~D~LI 1245 (1516)
T KOG1832|consen 1172 WDASSTGGPRHSFDEDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSS------YSNNLAHFSPCDTLI 1245 (1516)
T ss_pred hccccccCccccccccceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhh------hhccccccCCCcceE
Confidence 3446778887655556666667889999999988877543321110 223667788865544
Q ss_pred EEecCCcEEEEeCCCC
Q psy7433 190 SCGADGSMKVRQLPDR 205 (213)
Q Consensus 190 s~~~d~~i~iw~~~~~ 205 (213)
- .|| .+||++..
T Consensus 1246 l--ndG--vLWDvR~~ 1257 (1516)
T KOG1832|consen 1246 L--NDG--VLWDVRIP 1257 (1516)
T ss_pred e--eCc--eeeeeccH
Confidence 3 354 46887765
|
|
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=8.1e-06 Score=63.06 Aligned_cols=138 Identities=7% Similarity=0.024 Sum_probs=81.9
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcC-CC--cEEEEec
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGK-KG--DICVIDL 84 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~--~v~iwd~ 84 (213)
+......|+|||+.++.......+..|.++|+. .+. .+.+..+........|+|||+.|+..+. .+ .|.+.|+
T Consensus 233 g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~---~g~-~~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl 308 (419)
T PRK04043 233 GMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTN---TKT-LTQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKL 308 (419)
T ss_pred CcEEeeEECCCCCEEEEEEccCCCcEEEEEECC---CCc-EEEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEEC
Confidence 345567899999877755311234567777873 222 3333333333345689999987776553 23 6888888
Q ss_pred cCceEEEecccCCCCeeEEEecCCCCEEEEecCCC---------cee---------------eceEEEEEccCCceEEEe
Q psy7433 85 RQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDG---------DIK---------------SPVKCLAIDPHEEFFVTG 140 (213)
Q Consensus 85 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~---------~i~---------------~~v~~~~~~~~~~~l~~~ 140 (213)
.+++..+.... .. ....|+|+|+.++...... .+. .......|+|||+.++..
T Consensus 309 ~~g~~~rlt~~-g~--~~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~~~LT~~~~~~~p~~SPDG~~I~f~ 385 (419)
T PRK04043 309 NSGSVEQVVFH-GK--NNSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYIRRLTANGVNQFPRFSSDGGSIMFI 385 (419)
T ss_pred CCCCeEeCccC-CC--cCceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCeEECCCCCCcCCeEECCCCCEEEEE
Confidence 87765433321 11 1248999999887766542 222 122357899999876655
Q ss_pred cCC-C--cEEEEEcc
Q psy7433 141 AGD-G--DIKVWSLS 152 (213)
Q Consensus 141 ~~d-g--~i~v~d~~ 152 (213)
+.+ + .+.+.++.
T Consensus 386 ~~~~~~~~L~~~~l~ 400 (419)
T PRK04043 386 KYLGNQSALGIIRLN 400 (419)
T ss_pred EccCCcEEEEEEecC
Confidence 433 2 35555553
|
|
| >KOG2041|consensus | Back alignment and domain information |
|---|
Probab=98.60 E-value=6.7e-07 Score=70.69 Aligned_cols=139 Identities=15% Similarity=0.191 Sum_probs=107.8
Q ss_pred cCCceEEEEecCCCEEEEEcCCCcEEEEeccCce---------------EEEecccCCCCeeEEEecCCCCEEEEecCCC
Q psy7433 55 DQGASSLVFAPQHQLLISAGKKGDICVIDLRQRV---------------IRSRFNAHESPVKCLAIDPHEEFFVTGAGDG 119 (213)
Q Consensus 55 ~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~---------------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~ 119 (213)
+....++.|+.+..+++.|+.||.+++..+.+.. .-+.+.+|...|.-+.|+.+...|.+...+|
T Consensus 14 nvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~G 93 (1189)
T KOG2041|consen 14 NVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTSG 93 (1189)
T ss_pred CceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCCc
Confidence 3457899999999999999999999999886521 1245678999999999999988999999999
Q ss_pred cee-------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeee-eeecCCCCceeEEEecCCCeEE
Q psy7433 120 DIK-------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLL-YNFPGEHARSSFFKHIGQGVTQ 179 (213)
Q Consensus 120 ~i~-------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~ 179 (213)
.|. +.|.+|+|+.+|..++..-.||.|.|=.+...+.- ..+++ .....
T Consensus 94 lIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNRIwgKeLkg------------~~l~h 161 (1189)
T KOG2041|consen 94 LIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNRIWGKELKG------------QLLAH 161 (1189)
T ss_pred eEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccceecchhcch------------heccc
Confidence 875 78999999999999999999999877665432221 12222 23557
Q ss_pred EEeCCCCe-EEEEecCCcEEEEeCCCC
Q psy7433 180 LHVDGGSR-LFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 180 ~~~~~~~~-l~s~~~d~~i~iw~~~~~ 205 (213)
+.|++|.. ++.+-..|.+.+||....
T Consensus 162 v~ws~D~~~~Lf~~ange~hlydnqgn 188 (1189)
T KOG2041|consen 162 VLWSEDLEQALFKKANGETHLYDNQGN 188 (1189)
T ss_pred eeecccHHHHHhhhcCCcEEEeccccc
Confidence 88998754 556667789999987654
|
|
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=98.59 E-value=2.9e-05 Score=55.37 Aligned_cols=168 Identities=17% Similarity=0.223 Sum_probs=98.6
Q ss_pred CCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEec-ccC
Q psy7433 18 SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRF-NAH 96 (213)
Q Consensus 18 ~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~-~~~ 96 (213)
++..++++ +.++.|..||. .+++.+..... ...+.... ...+..++.+..++.+..+|..+|+.+... ...
T Consensus 35 ~~~~v~~~---~~~~~l~~~d~---~tG~~~W~~~~-~~~~~~~~-~~~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~ 106 (238)
T PF13360_consen 35 DGGRVYVA---SGDGNLYALDA---KTGKVLWRFDL-PGPISGAP-VVDGGRVYVGTSDGSLYALDAKTGKVLWSIYLTS 106 (238)
T ss_dssp ETTEEEEE---ETTSEEEEEET---TTSEEEEEEEC-SSCGGSGE-EEETTEEEEEETTSEEEEEETTTSCEEEEEEE-S
T ss_pred eCCEEEEE---cCCCEEEEEEC---CCCCEEEEeec-ccccccee-eecccccccccceeeeEecccCCcceeeeecccc
Confidence 44455555 47999999998 56666666554 33322222 224556666667889999999999888774 322
Q ss_pred CC---CeeEEEecCCCCEEEEecCCCcee---------------------ec------e-EEEEEccCCceEEEecCCCc
Q psy7433 97 ES---PVKCLAIDPHEEFFVTGAGDGDIK---------------------SP------V-KCLAIDPHEEFFVTGAGDGD 145 (213)
Q Consensus 97 ~~---~i~~~~~~~~~~~l~~~~~~~~i~---------------------~~------v-~~~~~~~~~~~l~~~~~dg~ 145 (213)
.. ..........+..++++..++.+. .. + ..+.+. ++ .+..++.++.
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~v~~~~~~g~ 184 (238)
T PF13360_consen 107 SPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSSPISSFSDINGSPVIS-DG-RVYVSSGDGR 184 (238)
T ss_dssp SCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS--EEEETTEEEEEECC-TT-EEEEECCTSS
T ss_pred ccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCCcceeeecccccceEEE-CC-EEEEEcCCCe
Confidence 11 111222222355666666555553 00 1 122222 34 6666776775
Q ss_pred -EEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCccc
Q psy7433 146 -IKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 146 -i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
+.+ |+++++.+.... . ..+.......++.|+.++.++.+..||+.+++..
T Consensus 185 ~~~~-d~~tg~~~w~~~-~-----------~~~~~~~~~~~~~l~~~~~~~~l~~~d~~tG~~~ 235 (238)
T PF13360_consen 185 VVAV-DLATGEKLWSKP-I-----------SGIYSLPSVDGGTLYVTSSDGRLYALDLKTGKVV 235 (238)
T ss_dssp EEEE-ETTTTEEEEEEC-S-----------S-ECECEECCCTEEEEEETTTEEEEEETTTTEEE
T ss_pred EEEE-ECCCCCEEEEec-C-----------CCccCCceeeCCEEEEEeCCCEEEEEECCCCCEE
Confidence 555 999998664333 2 2333323344677877779999999999998653
|
... |
| >KOG1832|consensus | Back alignment and domain information |
|---|
Probab=98.58 E-value=1.5e-07 Score=75.97 Aligned_cols=67 Identities=9% Similarity=0.252 Sum_probs=56.3
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEc
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG 74 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 74 (213)
+|+.|+...+|++|+-+.+.|+.| +..|.|+++++ ..+.......+|...++-+.=+.+|..+++.+
T Consensus 1096 ~frd~~~~fTc~afs~~~~hL~vG---~~~Geik~~nv---~sG~~e~s~ncH~SavT~vePs~dgs~~Ltss 1162 (1516)
T KOG1832|consen 1096 SFRDETALFTCIAFSGGTNHLAVG---SHAGEIKIFNV---SSGSMEESVNCHQSAVTLVEPSVDGSTQLTSS 1162 (1516)
T ss_pred hhhccccceeeEEeecCCceEEee---eccceEEEEEc---cCccccccccccccccccccccCCcceeeeec
Confidence 577899999999999999999999 89999999999 56777777888888888887777777665443
|
|
| >PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats | Back alignment and domain information |
|---|
Probab=98.54 E-value=3.8e-05 Score=59.64 Aligned_cols=72 Identities=21% Similarity=0.251 Sum_probs=58.7
Q ss_pred eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEe
Q psy7433 123 SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQ 201 (213)
Q Consensus 123 ~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~ 201 (213)
..+.+++++|+...++.|+.||.|.+||...+..... +.. -.++.++|+|++ .+++|+..|.+.+||
T Consensus 260 s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~~-ka~-----------~~P~~iaWHp~gai~~V~s~qGelQ~FD 327 (545)
T PF11768_consen 260 SQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTLLA-KAE-----------FIPTLIAWHPDGAIFVVGSEQGELQCFD 327 (545)
T ss_pred CcceEEecCcccceEEEEecCCeEEEEEcCCCeeeee-eec-----------ccceEEEEcCCCcEEEEEcCCceEEEEE
Confidence 7899999999999999999999999999876543322 221 357889999976 578888889999999
Q ss_pred CCCCc
Q psy7433 202 LPDRD 206 (213)
Q Consensus 202 ~~~~~ 206 (213)
+.-..
T Consensus 328 ~ALsp 332 (545)
T PF11768_consen 328 MALSP 332 (545)
T ss_pred eecCc
Confidence 97653
|
|
| >PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats | Back alignment and domain information |
|---|
Probab=98.54 E-value=6.5e-07 Score=69.07 Aligned_cols=74 Identities=9% Similarity=0.139 Sum_probs=60.3
Q ss_pred ccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEecc
Q psy7433 6 HNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLR 85 (213)
Q Consensus 6 h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~ 85 (213)
....|.+++++|+.+.|+.| +.||.|.+||... . .. .+....-..+.++|+|+|..+++|+..|.+.+||+.
T Consensus 258 L~s~v~~ca~sp~E~kLvlG---C~DgSiiLyD~~~---~-~t-~~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~A 329 (545)
T PF11768_consen 258 LPSQVICCARSPSEDKLVLG---CEDGSIILYDTTR---G-VT-LLAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMA 329 (545)
T ss_pred cCCcceEEecCcccceEEEE---ecCCeEEEEEcCC---C-ee-eeeeecccceEEEEcCCCcEEEEEcCCceEEEEEee
Confidence 46789999999999999999 8999999999732 1 22 222234557899999999999999999999999986
Q ss_pred Cc
Q psy7433 86 QR 87 (213)
Q Consensus 86 ~~ 87 (213)
-.
T Consensus 330 Ls 331 (545)
T PF11768_consen 330 LS 331 (545)
T ss_pred cC
Confidence 44
|
|
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=98.54 E-value=3.9e-05 Score=54.69 Aligned_cols=169 Identities=15% Similarity=0.261 Sum_probs=95.5
Q ss_pred CccEEEEeCCCcccccceeeeeeecCCceEEE--EecCCCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCC
Q psy7433 31 SKNVCLWDSLLPQKKALVQAFVCHDQGASSLV--FAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPH 108 (213)
Q Consensus 31 ~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~ 108 (213)
++.|..||. .+++.+..... ........ ..+++.++++++.++.|..||..+|+.+..+.. ..++...... .
T Consensus 2 ~g~l~~~d~---~tG~~~W~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~-~~~~~~~~~~-~ 75 (238)
T PF13360_consen 2 DGTLSALDP---RTGKELWSYDL-GPGIGGPVATAVPDGGRVYVASGDGNLYALDAKTGKVLWRFDL-PGPISGAPVV-D 75 (238)
T ss_dssp TSEEEEEET---TTTEEEEEEEC-SSSCSSEEETEEEETTEEEEEETTSEEEEEETTTSEEEEEEEC-SSCGGSGEEE-E
T ss_pred CCEEEEEEC---CCCCEEEEEEC-CCCCCCccceEEEeCCEEEEEcCCCEEEEEECCCCCEEEEeec-cccccceeee-c
Confidence 678899997 46666666543 11122222 333566788888999999999999988877654 2222111111 2
Q ss_pred CCEEEEecCCCcee----------ec-----------eEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCce
Q psy7433 109 EEFFVTGAGDGDIK----------SP-----------VKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARS 167 (213)
Q Consensus 109 ~~~l~~~~~~~~i~----------~~-----------v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~ 167 (213)
+..++++..++.+. -. ...+.....+..++++..++.|..+|+++++.+..........
T Consensus 76 ~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~ 155 (238)
T PF13360_consen 76 GGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRG 155 (238)
T ss_dssp TTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-S
T ss_pred ccccccccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCC
Confidence 23333333444332 11 1112222236778888889999999999999988877643221
Q ss_pred eE-EEecCCCeEEEEeCCCCeEEEEecCCc-EEEEeCCCCcc
Q psy7433 168 SF-FKHIGQGVTQLHVDGGSRLFSCGADGS-MKVRQLPDRDA 207 (213)
Q Consensus 168 ~~-~~~~~~~v~~~~~~~~~~l~s~~~d~~-i~iw~~~~~~~ 207 (213)
.. .... ..+..-....++.++.++.++. +.+ |+.+++.
T Consensus 156 ~~~~~~~-~~~~~~~~~~~~~v~~~~~~g~~~~~-d~~tg~~ 195 (238)
T PF13360_consen 156 SSPISSF-SDINGSPVISDGRVYVSSGDGRVVAV-DLATGEK 195 (238)
T ss_dssp S--EEEE-TTEEEEEECCTTEEEEECCTSSEEEE-ETTTTEE
T ss_pred Ccceeee-cccccceEEECCEEEEEcCCCeEEEE-ECCCCCE
Confidence 10 0000 1122222223447777777775 444 8888753
|
... |
| >KOG3617|consensus | Back alignment and domain information |
|---|
Probab=98.53 E-value=1.8e-06 Score=69.63 Aligned_cols=105 Identities=17% Similarity=0.188 Sum_probs=80.5
Q ss_pred EEEeCCCCeEEEeecc-CCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEE
Q psy7433 13 FVFLGSCSLVATAGHS-SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRS 91 (213)
Q Consensus 13 ~~~~~~~~~l~~~g~~-s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~ 91 (213)
..|+|...+||.+..+ ...|.|.||- .++++.+... .+-.+++++|+|..-.|+.|=.-|.+.+|...+.+...
T Consensus 21 ~SWHPsePlfAVA~fS~er~GSVtIfa----dtGEPqr~Vt-~P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~ht 95 (1416)
T KOG3617|consen 21 SSWHPSEPLFAVASFSPERGGSVTIFA----DTGEPQRDVT-YPVHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHT 95 (1416)
T ss_pred cccCCCCceeEEEEecCCCCceEEEEe----cCCCCCcccc-cceehhhhccChHHHHHhhccccceeEEEecCCceeee
Confidence 4799999999987431 2468899986 3444433322 12336779999998888898888999999988776665
Q ss_pred ecccCCCCeeEEEecCCCCEEEEecCCCcee
Q psy7433 92 RFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122 (213)
Q Consensus 92 ~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~ 122 (213)
....|..+|..+.|+|+|..++++..-|.+.
T Consensus 96 v~~th~a~i~~l~wS~~G~~l~t~d~~g~v~ 126 (1416)
T KOG3617|consen 96 VVETHPAPIQGLDWSHDGTVLMTLDNPGSVH 126 (1416)
T ss_pred eccCCCCCceeEEecCCCCeEEEcCCCceeE
Confidence 5667999999999999999999998877664
|
|
| >KOG1275|consensus | Back alignment and domain information |
|---|
Probab=98.52 E-value=1.5e-05 Score=64.87 Aligned_cols=159 Identities=10% Similarity=0.120 Sum_probs=107.9
Q ss_pred CCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCC
Q psy7433 30 ESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHE 109 (213)
Q Consensus 30 ~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~ 109 (213)
....+..+|++ +.+..+...-....+.-++. +++.+.+|...|+|.+-|.++.+.++++..|.+.+..+... |
T Consensus 155 ~Q~~li~~Dl~---~~~e~r~~~v~a~~v~imR~--Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDfDv~--G 227 (1118)
T KOG1275|consen 155 LQEKLIHIDLN---TEKETRTTNVSASGVTIMRY--NNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDFDVQ--G 227 (1118)
T ss_pred hhhheeeeecc---cceeeeeeeccCCceEEEEe--cCcEEEeecccceEEeecCCcCceeeeeeccccceeeeecc--C
Confidence 45566677763 33333333222223444443 67899999999999999999999999999999999877665 8
Q ss_pred CEEEEecCCCcee-------------------------eceEEEEEccC-CceEEEecCCCcEEEEEcc-CCee-eeeec
Q psy7433 110 EFFVTGAGDGDIK-------------------------SPVKCLAIDPH-EEFFVTGAGDGDIKVWSLS-GNHL-LYNFP 161 (213)
Q Consensus 110 ~~l~~~~~~~~i~-------------------------~~v~~~~~~~~-~~~l~~~~~dg~i~v~d~~-~~~~-~~~~~ 161 (213)
+.|++|+...... ....-+.|+|. ...+++.+..|...+-|.. .+++ .....
T Consensus 228 NlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~~~~~~ 307 (1118)
T KOG1275|consen 228 NLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGPQFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNPPAGVKM 307 (1118)
T ss_pred CeEEEeecccccccccccchhhhhhhhhhhccCCcccccCchhhhhcccccceEEEEecccceeeccccccCCCccceeE
Confidence 9999998776542 22234556665 3468888888888888832 1111 11111
Q ss_pred CCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCC
Q psy7433 162 GEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLP 203 (213)
Q Consensus 162 ~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~ 203 (213)
....+..+.++++++++ .++.+..+|.|.+|.-.
T Consensus 308 --------v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa~~ 342 (1118)
T KOG1275|consen 308 --------VNPNGSGISAFDISSNGDALAFGDHEGHVNLWADR 342 (1118)
T ss_pred --------EccCCCcceeEEecCCCceEEEecccCcEeeecCC
Confidence 11113569999999865 58999999999999833
|
|
| >KOG3621|consensus | Back alignment and domain information |
|---|
Probab=98.51 E-value=1.6e-05 Score=62.77 Aligned_cols=109 Identities=13% Similarity=0.162 Sum_probs=80.0
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeee--eecCCceEEEEecCCCEEEEEcCCCcEEEEec
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV--CHDQGASSLVFAPQHQLLISAGKKGDICVIDL 84 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~ 84 (213)
...|.=-+++..+++++.| +.-|.+.+|+- .....+.++ +..+.+..+..+++..++|+|+..|.|.++-+
T Consensus 33 ~~~v~lTc~dst~~~l~~G---sS~G~lyl~~R----~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql 105 (726)
T KOG3621|consen 33 PARVKLTCVDATEEYLAMG---SSAGSVYLYNR----HTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQL 105 (726)
T ss_pred cceEEEEEeecCCceEEEe---cccceEEEEec----CchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehh
Confidence 3445445677789999999 78999999995 222222222 23455667778888889999999999999988
Q ss_pred cCceEE-----Eec-ccCCCCeeEEEecCCCCEEEEecCCCcee
Q psy7433 85 RQRVIR-----SRF-NAHESPVKCLAIDPHEEFFVTGAGDGDIK 122 (213)
Q Consensus 85 ~~~~~~-----~~~-~~~~~~i~~~~~~~~~~~l~~~~~~~~i~ 122 (213)
....+. ... +.|...|++++|++++..+.+|...|.+.
T Consensus 106 ~~~~p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~ 149 (726)
T KOG3621|consen 106 NKELPRDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVV 149 (726)
T ss_pred hccCCCcceeeccccccCCceEEEEEecccccEEeecCCCceEE
Confidence 664221 111 23678899999999999999999999875
|
|
| >KOG1920|consensus | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.7e-05 Score=66.18 Aligned_cols=145 Identities=14% Similarity=0.151 Sum_probs=92.4
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCC------C------cc--------cccceeeeeee------------
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSL------L------PQ--------KKALVQAFVCH------------ 54 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~------~------~~--------~~~~~~~~~~~------------ 54 (213)
...|.+++|+||+..++.. +..+++.+-+-. . .. -++....+.+.
T Consensus 109 d~GI~aaswS~Dee~l~li---T~~~tll~mT~~f~~i~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ 185 (1265)
T KOG1920|consen 109 DNGISAASWSPDEELLALI---TGRQTLLFMTKDFEPIAEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEK 185 (1265)
T ss_pred cCceEEEeecCCCcEEEEE---eCCcEEEEEeccccchhccccccccccccccceecccccceeeecchhhhcccccccc
Confidence 4679999999999998888 556666655420 0 00 00111112110
Q ss_pred ---------cCCceEEEEecCCCEEEEE-----cCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCC-
Q psy7433 55 ---------DQGASSLVFAPQHQLLISA-----GKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDG- 119 (213)
Q Consensus 55 ---------~~~v~~~~~~~~~~~l~~~-----~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~- 119 (213)
...=+.+.|--||+++++. ...+.|++||.+ +..-..-......-.+++|-|.|..+++-..+.
T Consensus 186 ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~RkirV~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~s 264 (1265)
T KOG1920|consen 186 EKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTRKIRVYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTS 264 (1265)
T ss_pred cccccchhhccCCceEEEccCCcEEEEEEEeccCCceeEEEeccc-chhhcccCcccccccceeecCCCCeEeeeeecCC
Confidence 1122458898899998873 333789999977 433222222334456899999998888764433
Q ss_pred --cee--------------------eceEEEEEccCCceEEE---ecCCCcEEEEEccCCe
Q psy7433 120 --DIK--------------------SPVKCLAIDPHEEFFVT---GAGDGDIKVWSLSGNH 155 (213)
Q Consensus 120 --~i~--------------------~~v~~~~~~~~~~~l~~---~~~dg~i~v~d~~~~~ 155 (213)
.|. ..+..++|+.++..|++ ......|++|-+.+.+
T Consensus 265 d~~IvffErNGL~hg~f~l~~p~de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~Nyh 325 (1265)
T KOG1920|consen 265 DSDIVFFERNGLRHGEFVLPFPLDEKEVEELAWNSNSDILAVVTSNLENSLVQLWTTGNYH 325 (1265)
T ss_pred CCcEEEEecCCccccccccCCcccccchheeeecCCCCceeeeecccccceEEEEEecCeE
Confidence 232 34899999999998888 4455569999987654
|
|
| >KOG4640|consensus | Back alignment and domain information |
|---|
Probab=98.49 E-value=9.6e-07 Score=68.61 Aligned_cols=93 Identities=17% Similarity=0.137 Sum_probs=78.8
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCce-EEEEecCCCEEEEEcCCCcEEEEeccC
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGAS-SLVFAPQHQLLISAGKKGDICVIDLRQ 86 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~v~iwd~~~ 86 (213)
..|.-+.|+|.-.++|++ ..+|.|.+..+ . .+.+.+++.++.+++ +++|.|||+.|+.|-.||+|++.|+++
T Consensus 21 ~~i~~~ewnP~~dLiA~~---t~~gelli~R~---n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~ 93 (665)
T KOG4640|consen 21 INIKRIEWNPKMDLIATR---TEKGELLIHRL---N-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEK 93 (665)
T ss_pred cceEEEEEcCccchhhee---ccCCcEEEEEe---c-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccC
Confidence 457789999999999999 78999999997 3 778888887888887 999999999999999999999999999
Q ss_pred ceEEEecc-cCCCCeeEEEecC
Q psy7433 87 RVIRSRFN-AHESPVKCLAIDP 107 (213)
Q Consensus 87 ~~~~~~~~-~~~~~i~~~~~~~ 107 (213)
+..+.... ....+|.++-|.+
T Consensus 94 ~~~l~~~~~s~e~~is~~~w~~ 115 (665)
T KOG4640|consen 94 GGRLVSFLFSVETDISKGIWDR 115 (665)
T ss_pred CCceeccccccccchheeeccc
Confidence 87776632 2456777888864
|
|
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=98.46 E-value=8e-05 Score=55.85 Aligned_cols=109 Identities=12% Similarity=0.081 Sum_probs=74.7
Q ss_pred ccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcC----------CCcEEEEeccCceEEEecccCCCCee
Q psy7433 32 KNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGK----------KGDICVIDLRQRVIRSRFNAHESPVK 101 (213)
Q Consensus 32 ~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----------d~~v~iwd~~~~~~~~~~~~~~~~i~ 101 (213)
++|.+.|. .+.+.+..+..-..+ ..+ ++|+++.|+.+.. +..|.+||..+.+.+..+.-...+-.
T Consensus 27 ~~v~ViD~---~~~~v~g~i~~G~~P-~~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~ 101 (352)
T TIGR02658 27 TQVYTIDG---EAGRVLGMTDGGFLP-NPV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRF 101 (352)
T ss_pred ceEEEEEC---CCCEEEEEEEccCCC-cee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchh
Confidence 89999998 567777777644333 234 9999998887654 78999999999998887763322110
Q ss_pred EEEecCCCCEEEEecCCCceeeceEEEEEccCCceEEEec-C-CCcEEEEEccCCeeeeeecCC
Q psy7433 102 CLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPHEEFFVTGA-G-DGDIKVWSLSGNHLLYNFPGE 163 (213)
Q Consensus 102 ~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~~~~l~~~~-~-dg~i~v~d~~~~~~~~~~~~~ 163 (213)
. .-+ ....++++|||+++++.. . +..|.+.|+.+++.+..+...
T Consensus 102 ~--~~~----------------~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp 147 (352)
T TIGR02658 102 L--VGT----------------YPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVP 147 (352)
T ss_pred h--ccC----------------ccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCC
Confidence 0 011 112355677777777665 3 578889999888888877764
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >KOG4649|consensus | Back alignment and domain information |
|---|
Probab=98.40 E-value=0.00011 Score=51.73 Aligned_cols=70 Identities=10% Similarity=0.063 Sum_probs=49.8
Q ss_pred CCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecc
Q psy7433 19 CSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFN 94 (213)
Q Consensus 19 ~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~ 94 (213)
|++++.| ..+|.+.+.++ +++.....+.....--......+++..+..|+.|+..+..|.++...+.+.+
T Consensus 63 gdfVV~G---Cy~g~lYfl~~---~tGs~~w~f~~~~~vk~~a~~d~~~glIycgshd~~~yalD~~~~~cVyksk 132 (354)
T KOG4649|consen 63 GDFVVLG---CYSGGLYFLCV---KTGSQIWNFVILETVKVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSK 132 (354)
T ss_pred CCEEEEE---EccCcEEEEEe---cchhheeeeeehhhhccceEEcCCCceEEEecCCCcEEEecccccceEEecc
Confidence 5567776 68999999998 5665665555433222233456788999999999999999998876665544
|
|
| >KOG2066|consensus | Back alignment and domain information |
|---|
Probab=98.39 E-value=8e-06 Score=65.33 Aligned_cols=131 Identities=16% Similarity=0.231 Sum_probs=91.7
Q ss_pred CCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-------------
Q psy7433 56 QGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------- 122 (213)
Q Consensus 56 ~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------- 122 (213)
..+++++++ ++.|+-|..+|.|++++.... + .+...|... ..+|.++++|+.||.+.
T Consensus 40 D~is~~av~--~~~~~~GtH~g~v~~~~~~~~-~-~~~~~~s~~------~~~Gey~asCS~DGkv~I~sl~~~~~~~~~ 109 (846)
T KOG2066|consen 40 DAISCCAVH--DKFFALGTHRGAVYLTTCQGN-P-KTNFDHSSS------ILEGEYVASCSDDGKVVIGSLFTDDEITQY 109 (846)
T ss_pred hHHHHHHhh--cceeeeccccceEEEEecCCc-c-ccccccccc------ccCCceEEEecCCCcEEEeeccCCccceeE
Confidence 446666664 568999999999999987533 2 223333333 56799999999999765
Q ss_pred ---eceEEEEEccC-----CceEEEecCCCcEEEEEccC-CeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEec
Q psy7433 123 ---SPVKCLAIDPH-----EEFFVTGAGDGDIKVWSLSG-NHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGA 193 (213)
Q Consensus 123 ---~~v~~~~~~~~-----~~~l~~~~~dg~i~v~d~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~ 193 (213)
.++.+++++|+ .+.+++|+..| +.++.-+= ++.... ..+. ..++|.++.|. +.|++...
T Consensus 110 df~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v-~l~~--------~eG~I~~i~W~--g~lIAWan 177 (846)
T KOG2066|consen 110 DFKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSV-VLSE--------GEGPIHSIKWR--GNLIAWAN 177 (846)
T ss_pred ecCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccce-eeec--------CccceEEEEec--CcEEEEec
Confidence 78999999998 45899999988 77775431 111111 1111 12799999997 34666667
Q ss_pred CCcEEEEeCCCCccc
Q psy7433 194 DGSMKVRQLPDRDAV 208 (213)
Q Consensus 194 d~~i~iw~~~~~~~~ 208 (213)
|-.|++||+..++.+
T Consensus 178 d~Gv~vyd~~~~~~l 192 (846)
T KOG2066|consen 178 DDGVKVYDTPTRQRL 192 (846)
T ss_pred CCCcEEEecccccee
Confidence 777999999987654
|
|
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=98.35 E-value=0.00015 Score=55.46 Aligned_cols=130 Identities=16% Similarity=0.208 Sum_probs=76.2
Q ss_pred CCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCCC
Q psy7433 19 CSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHES 98 (213)
Q Consensus 19 ~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~ 98 (213)
+..++++ +.++.|..+|. .+++.+.............. .++..++.++.++.+..+|..+|+.+.+.... .
T Consensus 65 ~~~v~v~---~~~g~v~a~d~---~tG~~~W~~~~~~~~~~~p~--v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~-~ 135 (377)
T TIGR03300 65 GGKVYAA---DADGTVVALDA---ETGKRLWRVDLDERLSGGVG--ADGGLVFVGTEKGEVIALDAEDGKELWRAKLS-S 135 (377)
T ss_pred CCEEEEE---CCCCeEEEEEc---cCCcEeeeecCCCCcccceE--EcCCEEEEEcCCCEEEEEECCCCcEeeeeccC-c
Confidence 4456666 57899999997 45666555443322112222 24678888889999999999999887665432 2
Q ss_pred CeeE-EEecCCCCEEEEecCCCcee----------------eceEEEE--Ecc--CCceEEEecCCCcEEEEEccCCeee
Q psy7433 99 PVKC-LAIDPHEEFFVTGAGDGDIK----------------SPVKCLA--IDP--HEEFFVTGAGDGDIKVWSLSGNHLL 157 (213)
Q Consensus 99 ~i~~-~~~~~~~~~l~~~~~~~~i~----------------~~v~~~~--~~~--~~~~l~~~~~dg~i~v~d~~~~~~~ 157 (213)
.+.+ ... .+..++.++.++.+. .+...+. -+| .+..++.+..++.+..+|+++++.+
T Consensus 136 ~~~~~p~v--~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~~~~~v~~~~~~g~v~ald~~tG~~~ 213 (377)
T TIGR03300 136 EVLSPPLV--ANGLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRGSASPVIADGGVLVGFAGGKLVALDLQTGQPL 213 (377)
T ss_pred eeecCCEE--ECCEEEEECCCCeEEEEEcCCCceeeEEccCCCceeecCCCCCEEECCEEEEECCCCEEEEEEccCCCEe
Confidence 2211 111 233455555555554 0000000 001 1246778888899999999888766
Q ss_pred ee
Q psy7433 158 YN 159 (213)
Q Consensus 158 ~~ 159 (213)
..
T Consensus 214 W~ 215 (377)
T TIGR03300 214 WE 215 (377)
T ss_pred ee
Confidence 44
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >KOG1920|consensus | Back alignment and domain information |
|---|
Probab=98.32 E-value=0.00021 Score=60.12 Aligned_cols=185 Identities=14% Similarity=0.151 Sum_probs=111.4
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEec---
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDL--- 84 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~--- 84 (213)
..|.++.|..+...++.+ ...|.|.+-|.+ +. .+.....-...|.+++|+||++.++..+...++.+-.-
T Consensus 69 ~~i~s~~fl~d~~~i~v~---~~~G~iilvd~e---t~-~~eivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT~~f~ 141 (1265)
T KOG1920|consen 69 DEIVSVQFLADTNSICVI---TALGDIILVDPE---TL-ELEIVGNVDNGISAASWSPDEELLALITGRQTLLFMTKDFE 141 (1265)
T ss_pred cceEEEEEecccceEEEE---ecCCcEEEEccc---cc-ceeeeeeccCceEEEeecCCCcEEEEEeCCcEEEEEecccc
Confidence 578999999888877777 689999999863 22 22233334678999999999999988887777665322
Q ss_pred -cCceEE-------------------EecccC---------------------CCCeeEEEecCCCCEEEEec-----CC
Q psy7433 85 -RQRVIR-------------------SRFNAH---------------------ESPVKCLAIDPHEEFFVTGA-----GD 118 (213)
Q Consensus 85 -~~~~~~-------------------~~~~~~---------------------~~~i~~~~~~~~~~~l~~~~-----~~ 118 (213)
-.-+++ ..|.+. .+.=+.+.|--||.+|++.. ..
T Consensus 142 ~i~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~ 221 (1265)
T KOG1920|consen 142 PIAEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGT 221 (1265)
T ss_pred chhccccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCc
Confidence 111111 112110 11123477888888887732 21
Q ss_pred Ccee----------------eceEEEEEccCCceEEEe---cCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEE
Q psy7433 119 GDIK----------------SPVKCLAIDPHEEFFVTG---AGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQ 179 (213)
Q Consensus 119 ~~i~----------------~~v~~~~~~~~~~~l~~~---~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 179 (213)
+.++ ..-.+++|-|.|..+++- +.|+.|.+|. ++|..-..+..... ....++..
T Consensus 222 RkirV~drEg~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffE-rNGL~hg~f~l~~p------~de~~ve~ 294 (1265)
T KOG1920|consen 222 RKIRVYDREGALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFE-RNGLRHGEFVLPFP------LDEKEVEE 294 (1265)
T ss_pred eeEEEecccchhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEe-cCCccccccccCCc------ccccchhe
Confidence 3333 334678888888877765 3445677776 33332222211110 01134899
Q ss_pred EEeCCCC-eEEE---EecCCcEEEEeCCCCc
Q psy7433 180 LHVDGGS-RLFS---CGADGSMKVRQLPDRD 206 (213)
Q Consensus 180 ~~~~~~~-~l~s---~~~d~~i~iw~~~~~~ 206 (213)
++|+.++ .|+. ......|++|-+.+-.
T Consensus 295 L~Wns~sdiLAv~~~~~e~~~v~lwt~~Nyh 325 (1265)
T KOG1920|consen 295 LAWNSNSDILAVVTSNLENSLVQLWTTGNYH 325 (1265)
T ss_pred eeecCCCCceeeeecccccceEEEEEecCeE
Confidence 9999765 4444 3344459999987653
|
|
| >COG3490 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.32 E-value=0.00018 Score=51.41 Aligned_cols=175 Identities=10% Similarity=0.177 Sum_probs=115.7
Q ss_pred EEeCCCCeEEEeec--cCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcC----------------
Q psy7433 14 VFLGSCSLVATAGH--SSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGK---------------- 75 (213)
Q Consensus 14 ~~~~~~~~l~~~g~--~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------------- 75 (213)
.|+|||++|....+ ...-|.|-|||.+ ...+.+..+..|.-....+.|.+||+.++.+..
T Consensus 120 vfs~dG~~LYATEndfd~~rGViGvYd~r--~~fqrvgE~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNld 197 (366)
T COG3490 120 VFSPDGRLLYATENDFDPNRGVIGVYDAR--EGFQRVGEFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLD 197 (366)
T ss_pred ccCCCCcEEEeecCCCCCCCceEEEEecc--cccceecccccCCcCcceeEEecCCcEEEEeCCceecccccCccccchh
Confidence 58999999988732 1123689999986 556677788888888899999999999887642
Q ss_pred --CCcEEEEeccCceEEEec--c--cCCCCeeEEEecCCCCEEEEecCCCcee---------------------------
Q psy7433 76 --KGDICVIDLRQRVIRSRF--N--AHESPVKCLAIDPHEEFFVTGAGDGDIK--------------------------- 122 (213)
Q Consensus 76 --d~~v~iwd~~~~~~~~~~--~--~~~~~i~~~~~~~~~~~l~~~~~~~~i~--------------------------- 122 (213)
.-.+.+.|..+++.+.+. + .+.-.+..++..+++..++-+-..|.-.
T Consensus 198 sMePSlvlld~atG~liekh~Lp~~l~~lSiRHld~g~dgtvwfgcQy~G~~~d~ppLvg~~~~g~~l~~~~~pee~~~~ 277 (366)
T COG3490 198 SMEPSLVLLDAATGNLIEKHTLPASLRQLSIRHLDIGRDGTVWFGCQYRGPRNDLPPLVGHFRKGEPLEFLDLPEEQTAA 277 (366)
T ss_pred hcCccEEEEeccccchhhhccCchhhhhcceeeeeeCCCCcEEEEEEeeCCCccCCcceeeccCCCcCcccCCCHHHHHH
Confidence 123555565666555433 2 2345688899999888766654444221
Q ss_pred --eceEEEEEccCCceEEEecC-CCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEE
Q psy7433 123 --SPVKCLAIDPHEEFFVTGAG-DGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKV 199 (213)
Q Consensus 123 --~~v~~~~~~~~~~~l~~~~~-dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~i 199 (213)
..|-+++.+.+..+++..+- .+...+||..++..+..-.... ...++...++ ++..+.+|.+.+
T Consensus 278 ~anYigsiA~n~~~glV~lTSP~GN~~vi~da~tG~vv~~a~l~d------------aaGva~~~~g-f~vssg~G~~~~ 344 (366)
T COG3490 278 FANYIGSIAANRRDGLVALTSPRGNRAVIWDAATGAVVSEAALPD------------AAGVAAAKGG-FAVSSGQGRIIF 344 (366)
T ss_pred HHhhhhheeecccCCeEEEecCCCCeEEEEEcCCCcEEecccccc------------cccceeccCc-eEEecCCceEEe
Confidence 56777888876665555554 4567789999998876554422 3333333333 555567778877
Q ss_pred EeCC
Q psy7433 200 RQLP 203 (213)
Q Consensus 200 w~~~ 203 (213)
+.-.
T Consensus 345 ~s~~ 348 (366)
T COG3490 345 YSRA 348 (366)
T ss_pred cccc
Confidence 7443
|
|
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=98.28 E-value=6.3e-05 Score=57.58 Aligned_cols=135 Identities=15% Similarity=0.128 Sum_probs=84.0
Q ss_pred CeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCCCC
Q psy7433 20 SLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESP 99 (213)
Q Consensus 20 ~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~ 99 (213)
..+..+ +.++.+..+|. .+++.+..... ....... ..+..++.++.+|.+..+|..+++.+.........
T Consensus 242 ~~vy~~---~~~g~l~a~d~---~tG~~~W~~~~--~~~~~p~--~~~~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~ 311 (377)
T TIGR03300 242 GQVYAV---SYQGRVAALDL---RSGRVLWKRDA--SSYQGPA--VDDNRLYVTDADGVVVALDRRSGSELWKNDELKYR 311 (377)
T ss_pred CEEEEE---EcCCEEEEEEC---CCCcEEEeecc--CCccCce--EeCCEEEEECCCCeEEEEECCCCcEEEccccccCC
Confidence 344555 47889999998 34444443321 1111122 24667888888999999999988776554221111
Q ss_pred eeEEEecCCCCEEEEecCCCceeeceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEE
Q psy7433 100 VKCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQ 179 (213)
Q Consensus 100 i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 179 (213)
. ..+| .. .+..+++++.+|.++++|.++++.+..++.+. ..+..
T Consensus 312 ~---~ssp---------------------~i--~g~~l~~~~~~G~l~~~d~~tG~~~~~~~~~~----------~~~~~ 355 (377)
T TIGR03300 312 Q---LTAP---------------------AV--VGGYLVVGDFEGYLHWLSREDGSFVARLKTDG----------SGIAS 355 (377)
T ss_pred c---cccC---------------------EE--ECCEEEEEeCCCEEEEEECCCCCEEEEEEcCC----------Ccccc
Confidence 0 0000 01 24678889999999999999999988887643 12221
Q ss_pred EEeCCCCeEEEEecCCcEEEE
Q psy7433 180 LHVDGGSRLFSCGADGSMKVR 200 (213)
Q Consensus 180 ~~~~~~~~l~s~~~d~~i~iw 200 (213)
--...++.|+.++.||.|+.+
T Consensus 356 sp~~~~~~l~v~~~dG~l~~~ 376 (377)
T TIGR03300 356 PPVVVGDGLLVQTRDGDLYAF 376 (377)
T ss_pred CCEEECCEEEEEeCCceEEEe
Confidence 111225678899999998765
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex | Back alignment and domain information |
|---|
Probab=98.25 E-value=0.00089 Score=51.83 Aligned_cols=48 Identities=15% Similarity=0.280 Sum_probs=36.6
Q ss_pred cEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEecc
Q psy7433 33 NVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLR 85 (213)
Q Consensus 33 ~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~ 85 (213)
.|.+|+. .++.+.++.-..+.+.++.|+.+.+ |+....||.+++||+.
T Consensus 62 ~I~iys~----sG~ll~~i~w~~~~iv~~~wt~~e~-LvvV~~dG~v~vy~~~ 109 (410)
T PF04841_consen 62 SIQIYSS----SGKLLSSIPWDSGRIVGMGWTDDEE-LVVVQSDGTVRVYDLF 109 (410)
T ss_pred EEEEECC----CCCEeEEEEECCCCEEEEEECCCCe-EEEEEcCCEEEEEeCC
Confidence 5888884 5666776665558899999988654 5566689999999984
|
Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm |
| >KOG1645|consensus | Back alignment and domain information |
|---|
Probab=98.23 E-value=6.6e-06 Score=60.88 Aligned_cols=86 Identities=20% Similarity=0.224 Sum_probs=69.1
Q ss_pred cccceeeeeeecCCceEEEEecCCC-EEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee
Q psy7433 44 KKALVQAFVCHDQGASSLVFAPQHQ-LLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122 (213)
Q Consensus 44 ~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~ 122 (213)
+.+....+..+...|..++|+|..+ ++..++.+..|+|.|+++...+..+..+ .++++++|.-+..
T Consensus 182 ~fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~------------ 248 (463)
T KOG1645|consen 182 DFKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDER------------ 248 (463)
T ss_pred CcchhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCc------------
Confidence 3334445667778899999999665 7888999999999999999888887765 7788888876553
Q ss_pred eceEEEEEccCCceEEEecCCCcEEEEEccCC
Q psy7433 123 SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGN 154 (213)
Q Consensus 123 ~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~ 154 (213)
.++.+|..+|.|.|||+|..
T Consensus 249 ------------h~IYaGl~nG~VlvyD~R~~ 268 (463)
T KOG1645|consen 249 ------------HVIYAGLQNGMVLVYDMRQP 268 (463)
T ss_pred ------------ceeEEeccCceEEEEEccCC
Confidence 57888889999999999754
|
|
| >PRK13616 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=98.18 E-value=0.00027 Score=57.01 Aligned_cols=174 Identities=11% Similarity=0.138 Sum_probs=96.1
Q ss_pred CceEEEEEeCCCCeEEEeec---cCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCC--------
Q psy7433 8 KITSDFVFLGSCSLVATAGH---SSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKK-------- 76 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~---~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------- 76 (213)
..+.+.+++|+|+.+|..-. ...|..-.||-...... . ..+.. ....+.-.|+|+|..|++....
T Consensus 350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~--~-~~lt~-g~~~t~PsWspDG~~lw~v~dg~~~~~v~~ 425 (591)
T PRK13616 350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGV--A-VQVLE-GHSLTRPSWSLDADAVWVVVDGNTVVRVIR 425 (591)
T ss_pred cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCc--c-eeeec-CCCCCCceECCCCCceEEEecCcceEEEec
Confidence 45778899999998887620 00233334443311111 1 22221 2247888999998877766432
Q ss_pred ----CcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-------------------------eceEE
Q psy7433 77 ----GDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-------------------------SPVKC 127 (213)
Q Consensus 77 ----~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-------------------------~~v~~ 127 (213)
+.+.+.+++.++... .....|..+.|+|||..++.... +.+. ..+..
T Consensus 426 ~~~~gql~~~~vd~ge~~~---~~~g~Issl~wSpDG~RiA~i~~-g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~~~ 501 (591)
T PRK13616 426 DPATGQLARTPVDASAVAS---RVPGPISELQLSRDGVRAAMIIG-GKVYLAVVEQTEDGQYALTNPREVGPGLGDTAVS 501 (591)
T ss_pred cCCCceEEEEeccCchhhh---ccCCCcCeEEECCCCCEEEEEEC-CEEEEEEEEeCCCCceeecccEEeecccCCcccc
Confidence 233333444333322 23457999999999998776553 4443 23577
Q ss_pred EEEccCCceEEEecCCCcEEEEEccCCeeeeee-cCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEE
Q psy7433 128 LAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNF-PGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKV 199 (213)
Q Consensus 128 ~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~i 199 (213)
+.|.+++.++ ++..++.-.+|.+.-....... ..... ..++..++-+++ .++....++.+.+
T Consensus 502 l~W~~~~~L~-V~~~~~~~~v~~v~vDG~~~~~~~~~n~--------~~~v~~vaa~~~-~iyv~~~~g~~~l 564 (591)
T PRK13616 502 LDWRTGDSLV-VGRSDPEHPVWYVNLDGSNSDALPSRNL--------SAPVVAVAASPS-TVYVTDARAVLQL 564 (591)
T ss_pred ceEecCCEEE-EEecCCCCceEEEecCCccccccCCCCc--------cCceEEEecCCc-eEEEEcCCceEEe
Confidence 8899988854 5555555556655422221122 22111 146777777764 4555556664433
|
|
| >KOG1008|consensus | Back alignment and domain information |
|---|
Probab=98.14 E-value=1.6e-06 Score=67.70 Aligned_cols=198 Identities=14% Similarity=0.171 Sum_probs=115.3
Q ss_pred cccccCceEEEEEeC-CCCeEEEeec-cCCCccEEEEeCCCccc--ccceeeeeeecCCceEEEEecCCCEEEEEcCCCc
Q psy7433 3 YQCHNKITSDFVFLG-SCSLVATAGH-SSESKNVCLWDSLLPQK--KALVQAFVCHDQGASSLVFAPQHQLLISAGKKGD 78 (213)
Q Consensus 3 l~~h~~~v~~~~~~~-~~~~l~~~g~-~s~~~~i~iwd~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 78 (213)
.++|..++++++|++ |.+.||.|-. -..|..+.|||+...-+ ........+......+++|..+.+++++|...+.
T Consensus 98 tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~ 177 (783)
T KOG1008|consen 98 TPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRS 177 (783)
T ss_pred cccccccccccccccccHHHHHhhhhhhcccCCccceecccccCCCccccccccccccCccccccccCcchhhcccccch
Confidence 356788999999998 6677777621 12467899999954311 1111111123455678999988899999999999
Q ss_pred EEEEeccCce-EEEecccCCCCeeEEEecC-CCCEEEEecCCCcee-----------------------eceEEEEEccC
Q psy7433 79 ICVIDLRQRV-IRSRFNAHESPVKCLAIDP-HEEFFVTGAGDGDIK-----------------------SPVKCLAIDPH 133 (213)
Q Consensus 79 v~iwd~~~~~-~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~i~-----------------------~~v~~~~~~~~ 133 (213)
+.++|++... ....+ ....+..+...| .+.+++.-. ++.+. ..+..++|.|.
T Consensus 178 ~~ifdlRqs~~~~~sv--nTk~vqG~tVdp~~~nY~cs~~-dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPt 254 (783)
T KOG1008|consen 178 VHIFDLRQSLDSVSSV--NTKYVQGITVDPFSPNYFCSNS-DGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPT 254 (783)
T ss_pred hhhhhhhhhhhhhhhh--hhhhcccceecCCCCCceeccc-cCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccC
Confidence 9999998432 22222 223455666777 556665544 54442 45899999996
Q ss_pred Cc-eEEEec-CCCcEEEEEccCCeee-----eeecCCCCceeEEEecC--CCeEEEEeCCC---CeEEEEecCCcEEEEe
Q psy7433 134 EE-FFVTGA-GDGDIKVWSLSGNHLL-----YNFPGEHARSSFFKHIG--QGVTQLHVDGG---SRLFSCGADGSMKVRQ 201 (213)
Q Consensus 134 ~~-~l~~~~-~dg~i~v~d~~~~~~~-----~~~~~~~~~~~~~~~~~--~~v~~~~~~~~---~~l~s~~~d~~i~iw~ 201 (213)
.. .+++.+ ..++|+.+|++..... ..+.....+. .+++.+ ..|.+..|++- .+..++...-++.-++
T Consensus 255 rtglla~l~RdS~tIrlydi~~v~t~~s~nn~~~~~~~s~~-~~q~~~~~s~I~~f~wH~~s~~er~il~~~nl~~~Df~ 333 (783)
T KOG1008|consen 255 RTGLLAVLSRDSITIRLYDICVVGTEGSANNSVFVNYESKY-PVQPNSQCSGIDFFTWHTASPTERQILGVINLQPKDFS 333 (783)
T ss_pred CcchhhhhccCcceEEEecccccCCcccccccceeeecccc-cccccccccceeecCcCcCCccceeEEeeccCChhhcc
Confidence 44 444444 4578999998521100 0000000000 011112 56888888762 3455555555555555
Q ss_pred CCC
Q psy7433 202 LPD 204 (213)
Q Consensus 202 ~~~ 204 (213)
+..
T Consensus 334 V~e 336 (783)
T KOG1008|consen 334 VHE 336 (783)
T ss_pred chh
Confidence 543
|
|
| >KOG2314|consensus | Back alignment and domain information |
|---|
Probab=98.11 E-value=2.3e-05 Score=60.47 Aligned_cols=111 Identities=14% Similarity=0.225 Sum_probs=74.7
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCC-CcccccceeeeeeecCCceEEEEecCCCEEEEE---cCCCcEEEE
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSL-LPQKKALVQAFVCHDQGASSLVFAPQHQLLISA---GKKGDICVI 82 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~---~~d~~v~iw 82 (213)
...|...+|-|.|+.+++-.......++.+|.++ ++.....+..+.. ...+.+.|+|.|+.++.+ +..|.+.++
T Consensus 445 ke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~dk--~~~N~vfwsPkG~fvvva~l~s~~g~l~F~ 522 (698)
T KOG2314|consen 445 KESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELDK--KFANTVFWSPKGRFVVVAALVSRRGDLEFY 522 (698)
T ss_pred chheeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhhhhhhcc--cccceEEEcCCCcEEEEEEecccccceEEE
Confidence 4678999999999987765322456789999986 4445556666543 557889999999988765 457889999
Q ss_pred eccCceEEEecccCCCCeeEEEecCCCCEEEEecCCC
Q psy7433 83 DLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDG 119 (213)
Q Consensus 83 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~ 119 (213)
|+.-......-.......+.+.|.|.|+++++++.-.
T Consensus 523 D~~~a~~k~~~~~eh~~at~veWDPtGRYvvT~ss~w 559 (698)
T KOG2314|consen 523 DTDYADLKDTASPEHFAATEVEWDPTGRYVVTSSSSW 559 (698)
T ss_pred ecchhhhhhccCccccccccceECCCCCEEEEeeehh
Confidence 9874222221111223456677777777777665443
|
|
| >smart00320 WD40 WD40 repeats | Back alignment and domain information |
|---|
Probab=98.11 E-value=1.2e-05 Score=38.99 Aligned_cols=37 Identities=30% Similarity=0.485 Sum_probs=32.4
Q ss_pred ceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEe
Q psy7433 47 LVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVID 83 (213)
Q Consensus 47 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd 83 (213)
.+..+..|...+.++.|++++..+++++.|+.+++|+
T Consensus 4 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 4 LLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 4555667888999999999989999999999999996
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. |
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=98.07 E-value=0.00024 Score=54.94 Aligned_cols=144 Identities=13% Similarity=0.162 Sum_probs=88.0
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCC-ccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEE-cCCCc--EEEE
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSES-KNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISA-GKKGD--ICVI 82 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~-~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~--v~iw 82 (213)
...+..-+|+|++..++........ ..+.+++++.+.. ..+..+ .+.-...+|+|+|++|+-+ ..||. |.++
T Consensus 192 ~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~-~~i~~~---~g~~~~P~fspDG~~l~f~~~rdg~~~iy~~ 267 (425)
T COG0823 192 GSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKR-PVILNF---NGNNGAPAFSPDGSKLAFSSSRDGSPDIYLM 267 (425)
T ss_pred CcceeccccCcCCCceEEEEEecCCCceEEEEeccCCcc-ceeecc---CCccCCccCCCCCCEEEEEECCCCCccEEEE
Confidence 3456667889988876654321122 4689999854322 222233 3344567899999877644 45554 6667
Q ss_pred eccCceEEEecccCCCCeeEEEecCCCCEEEEecCCC-cee------------------eceEEEEEccCCceEEEecC-
Q psy7433 83 DLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDG-DIK------------------SPVKCLAIDPHEEFFVTGAG- 142 (213)
Q Consensus 83 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~-~i~------------------~~v~~~~~~~~~~~l~~~~~- 142 (213)
|+.+++.. .+....+.-..-.|+|+|+.++-.+..+ .-. ..-..-.|+|+|++++..+.
T Consensus 268 dl~~~~~~-~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~~riT~~~~~~~~p~~SpdG~~i~~~~~~ 346 (425)
T COG0823 268 DLDGKNLP-RLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQVTRLTFSGGGNSNPVWSPDGDKIVFESSS 346 (425)
T ss_pred cCCCCcce-ecccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCceeEeeccCCCCcCccCCCCCCEEEEEecc
Confidence 77776633 3544444445778999999887765543 211 22226778999998777664
Q ss_pred CCc--EEEEEccCCe
Q psy7433 143 DGD--IKVWSLSGNH 155 (213)
Q Consensus 143 dg~--i~v~d~~~~~ 155 (213)
+|. |.+.|+.++.
T Consensus 347 ~g~~~i~~~~~~~~~ 361 (425)
T COG0823 347 GGQWDIDKNDLASGG 361 (425)
T ss_pred CCceeeEEeccCCCC
Confidence 344 5566665544
|
|
| >PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=98.03 E-value=0.0024 Score=49.83 Aligned_cols=133 Identities=11% Similarity=0.081 Sum_probs=75.1
Q ss_pred eeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee--------
Q psy7433 51 FVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-------- 122 (213)
Q Consensus 51 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-------- 122 (213)
+.........+.++|+|+.++.+ .+|.-.++.....+... .+......|.+.++ +++-.....+.
T Consensus 28 lg~~~~~p~~ls~npngr~v~V~-g~geY~iyt~~~~r~k~-----~G~g~~~vw~~~n~-yAv~~~~~~I~I~kn~~~~ 100 (443)
T PF04053_consen 28 LGSCEIYPQSLSHNPNGRFVLVC-GDGEYEIYTALAWRNKA-----FGSGLSFVWSSRNR-YAVLESSSTIKIYKNFKNE 100 (443)
T ss_dssp EEE-SS--SEEEE-TTSSEEEEE-ETTEEEEEETTTTEEEE-----EEE-SEEEE-TSSE-EEEE-TTS-EEEEETTEE-
T ss_pred CCCCCcCCeeEEECCCCCEEEEE-cCCEEEEEEccCCcccc-----cCceeEEEEecCcc-EEEEECCCeEEEEEcCccc
Confidence 33344567899999999988885 56788888754433322 13345678888444 66655555544
Q ss_pred ------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCc
Q psy7433 123 ------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGS 196 (213)
Q Consensus 123 ------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~ 196 (213)
.+...-.+.+ |.+|...+.+ .|.+||+.+++.+..+.. .+|..+.|++++.+++-..+..
T Consensus 101 ~~k~i~~~~~~~~If~-G~LL~~~~~~-~i~~yDw~~~~~i~~i~v------------~~vk~V~Ws~~g~~val~t~~~ 166 (443)
T PF04053_consen 101 VVKSIKLPFSVEKIFG-GNLLGVKSSD-FICFYDWETGKLIRRIDV------------SAVKYVIWSDDGELVALVTKDS 166 (443)
T ss_dssp TT-----SS-EEEEE--SSSEEEEETT-EEEEE-TTT--EEEEESS-------------E-EEEEE-TTSSEEEEE-S-S
T ss_pred cceEEcCCcccceEEc-CcEEEEECCC-CEEEEEhhHcceeeEEec------------CCCcEEEEECCCCEEEEEeCCe
Confidence 1111111112 7766666554 899999999999999986 3589999999866555445668
Q ss_pred EEEEeCCC
Q psy7433 197 MKVRQLPD 204 (213)
Q Consensus 197 i~iw~~~~ 204 (213)
+.+++...
T Consensus 167 i~il~~~~ 174 (443)
T PF04053_consen 167 IYILKYNL 174 (443)
T ss_dssp EEEEEE-H
T ss_pred EEEEEecc
Confidence 88877653
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B. |
| >PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.01 E-value=0.0009 Score=50.84 Aligned_cols=99 Identities=9% Similarity=0.028 Sum_probs=61.5
Q ss_pred eCCCCeEEEeec------cCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceE
Q psy7433 16 LGSCSLVATAGH------SSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVI 89 (213)
Q Consensus 16 ~~~~~~l~~~g~------~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~ 89 (213)
|||+++++..-. -+..+.+.++|+++ + .+..+......+....|+|+|+.++... ++.|.+++..+++.
T Consensus 1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~---~-~~~~l~~~~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~ 75 (353)
T PF00930_consen 1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIET---G-EITPLTPPPPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQE 75 (353)
T ss_dssp -TTSSEEEEEEEEEEESSSEEEEEEEEEETTT---T-EEEESS-EETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEE
T ss_pred CCCCCeEEEEECcEEeeeeccceeEEEEecCC---C-ceEECcCCccccccceeecCCCeeEEEe-cCceEEEECCCCCe
Confidence 578887776310 01346788999843 2 2222332367789999999999998885 57999999887754
Q ss_pred EEecccC-----------------CCCeeEEEecCCCCEEEEecCCC
Q psy7433 90 RSRFNAH-----------------ESPVKCLAIDPHEEFFVTGAGDG 119 (213)
Q Consensus 90 ~~~~~~~-----------------~~~i~~~~~~~~~~~l~~~~~~~ 119 (213)
.+.-... -+.-..+-|+||+++|+....|.
T Consensus 76 ~~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~ 122 (353)
T PF00930_consen 76 TQLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDE 122 (353)
T ss_dssp EESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-
T ss_pred EEeccccceeEEcCccceeccccccccccceEECCCCCEEEEEEECC
Confidence 4322111 12336788999999988765544
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: |
| >KOG4640|consensus | Back alignment and domain information |
|---|
Probab=97.99 E-value=7.6e-05 Score=58.51 Aligned_cols=95 Identities=16% Similarity=0.222 Sum_probs=68.4
Q ss_pred cCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCceeeceEEEEEccCC
Q psy7433 55 DQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPHE 134 (213)
Q Consensus 55 ~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~~ 134 (213)
...+.-+.|+|.-.++|.+..+|.|.+..+. .+.+..++.+...++ .+++|.|||
T Consensus 20 ~~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~------------------------~sL~W~~DG 74 (665)
T KOG4640|consen 20 PINIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVT------------------------ASLCWRPDG 74 (665)
T ss_pred ccceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccc------------------------eeeeecCCC
Confidence 3467889999999999999999999999887 666666664444443 245555666
Q ss_pred ceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeC
Q psy7433 135 EFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVD 183 (213)
Q Consensus 135 ~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 183 (213)
+.|++|-.||+|++.|+.++..+........ ..|.++.|+
T Consensus 75 kllaVg~kdG~I~L~Dve~~~~l~~~~~s~e---------~~is~~~w~ 114 (665)
T KOG4640|consen 75 KLLAVGFKDGTIRLHDVEKGGRLVSFLFSVE---------TDISKGIWD 114 (665)
T ss_pred CEEEEEecCCeEEEEEccCCCceeccccccc---------cchheeecc
Confidence 7888888888888888888877766322221 456666665
|
|
| >smart00320 WD40 WD40 repeats | Back alignment and domain information |
|---|
Probab=97.98 E-value=1.4e-05 Score=38.77 Aligned_cols=34 Identities=26% Similarity=0.442 Sum_probs=30.4
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEe
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWD 38 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd 38 (213)
++.+|...|.++.|.+++.+++++ +.|+.+++|+
T Consensus 7 ~~~~~~~~i~~~~~~~~~~~~~~~---~~d~~~~~~~ 40 (40)
T smart00320 7 TLKGHTGPVTSVAFSPDGKYLASA---SDDGTIKLWD 40 (40)
T ss_pred EEEecCCceeEEEECCCCCEEEEe---cCCCeEEEcC
Confidence 466889999999999999999998 6899999996
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. |
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.0016 Score=50.23 Aligned_cols=121 Identities=15% Similarity=0.188 Sum_probs=72.4
Q ss_pred CCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-------------eceEEEEE-cc
Q psy7433 67 HQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-------------SPVKCLAI-DP 132 (213)
Q Consensus 67 ~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-------------~~v~~~~~-~~ 132 (213)
+..++.++.+|.+..+|..+++.+-+.... . ...+.. .+..+..++.++.+. .....-.+ +|
T Consensus 256 ~~~vy~~~~~g~l~ald~~tG~~~W~~~~~-~-~~~~~~--~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp 331 (394)
T PRK11138 256 GGVVYALAYNGNLVALDLRSGQIVWKREYG-S-VNDFAV--DGGRIYLVDQNDRVYALDTRGGVELWSQSDLLHRLLTAP 331 (394)
T ss_pred CCEEEEEEcCCeEEEEECCCCCEEEeecCC-C-ccCcEE--ECCEEEEEcCCCeEEEEECCCCcEEEcccccCCCcccCC
Confidence 456777778899999999999776544311 1 111111 233444444454443 00000000 11
Q ss_pred --CCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEE-EEeCCCCeEEEEecCCcEEEEeC
Q psy7433 133 --HEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQ-LHVDGGSRLFSCGADGSMKVRQL 202 (213)
Q Consensus 133 --~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~l~s~~~d~~i~iw~~ 202 (213)
.+.+++.++.+|.+.+.|..+++.+....... ..+.+ ..+ .+++|+.++.||.++.++.
T Consensus 332 ~v~~g~l~v~~~~G~l~~ld~~tG~~~~~~~~~~----------~~~~s~P~~-~~~~l~v~t~~G~l~~~~~ 393 (394)
T PRK11138 332 VLYNGYLVVGDSEGYLHWINREDGRFVAQQKVDS----------SGFLSEPVV-ADDKLLIQARDGTVYAITR 393 (394)
T ss_pred EEECCEEEEEeCCCEEEEEECCCCCEEEEEEcCC----------CcceeCCEE-ECCEEEEEeCCceEEEEeC
Confidence 24577888999999999999998887765432 12221 111 2678999999999988764
|
|
| >KOG3621|consensus | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.00016 Score=57.49 Aligned_cols=99 Identities=12% Similarity=0.180 Sum_probs=77.6
Q ss_pred cCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecc-cCCCCeeEEEecCCCCEEEEecCCCcee-----------
Q psy7433 55 DQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFN-AHESPVKCLAIDPHEEFFVTGAGDGDIK----------- 122 (213)
Q Consensus 55 ~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------- 122 (213)
...+.--+++..+++++.|+..|.+++|+-..++....-. +..+.+.....+++..++|.|+..+.+.
T Consensus 33 ~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~ 112 (726)
T KOG3621|consen 33 PARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRD 112 (726)
T ss_pred cceEEEEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCc
Confidence 3445556677789999999999999999977665443222 2445566677888888888888888775
Q ss_pred ------------eceEEEEEccCCceEEEecCCCcEEEEEccC
Q psy7433 123 ------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSG 153 (213)
Q Consensus 123 ------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~ 153 (213)
..|++++|++++..+.+|...|.|..-.+..
T Consensus 113 ~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 113 LDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred ceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence 6899999999999999999999998877755
|
|
| >KOG2079|consensus | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.00027 Score=58.85 Aligned_cols=99 Identities=16% Similarity=0.193 Sum_probs=70.6
Q ss_pred CCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCC
Q psy7433 18 SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHE 97 (213)
Q Consensus 18 ~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~ 97 (213)
.+..++.+ +..|.+...|++. +......=..-.++|++++|+.+|.+++.|-.+|.|.+||+.+++..+.+..+.
T Consensus 98 ~~~~ivi~---Ts~ghvl~~d~~~--nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ 172 (1206)
T KOG2079|consen 98 VVVPIVIG---TSHGHVLLSDMTG--NLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHG 172 (1206)
T ss_pred eeeeEEEE---cCchhhhhhhhhc--ccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecC
Confidence 45567777 7889999988731 111111111234689999999999999999999999999999998888877666
Q ss_pred CCeeEE---EecCCCCEEEEecCCCce
Q psy7433 98 SPVKCL---AIDPHEEFFVTGAGDGDI 121 (213)
Q Consensus 98 ~~i~~~---~~~~~~~~l~~~~~~~~i 121 (213)
.+.+.+ .+..++..++++...|.+
T Consensus 173 ap~t~vi~v~~t~~nS~llt~D~~Gsf 199 (1206)
T KOG2079|consen 173 APVTGVIFVGRTSQNSKLLTSDTGGSF 199 (1206)
T ss_pred CccceEEEEEEeCCCcEEEEccCCCce
Confidence 655444 344455667777777744
|
|
| >PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.005 Score=45.77 Aligned_cols=179 Identities=13% Similarity=0.191 Sum_probs=99.8
Q ss_pred EEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEecc-CceEE
Q psy7433 12 DFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLR-QRVIR 90 (213)
Q Consensus 12 ~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~-~~~~~ 90 (213)
.+.++.+++++...-. +....|.|-|+ ...+.+..+.. ..+..+.=++ ++.+.+-+.||.+.-..+. .|+..
T Consensus 99 ~~~ls~dgk~~~V~N~-TPa~SVtVVDl---~~~kvv~ei~~--PGC~~iyP~~-~~~F~~lC~DGsl~~v~Ld~~Gk~~ 171 (342)
T PF06433_consen 99 MFALSADGKFLYVQNF-TPATSVTVVDL---AAKKVVGEIDT--PGCWLIYPSG-NRGFSMLCGDGSLLTVTLDADGKEA 171 (342)
T ss_dssp GEEE-TTSSEEEEEEE-SSSEEEEEEET---TTTEEEEEEEG--TSEEEEEEEE-TTEEEEEETTSCEEEEEETSTSSEE
T ss_pred ceEEccCCcEEEEEcc-CCCCeEEEEEC---CCCceeeeecC--CCEEEEEecC-CCceEEEecCCceEEEEECCCCCEe
Confidence 3566777777666533 45567888887 45566655532 1222222122 2457777788998888886 34433
Q ss_pred Ee----cccCCCCe-eEEEecCCCCEEEEecCCCcee-----------------------------eceEEEEEccCCce
Q psy7433 91 SR----FNAHESPV-KCLAIDPHEEFFVTGAGDGDIK-----------------------------SPVKCLAIDPHEEF 136 (213)
Q Consensus 91 ~~----~~~~~~~i-~~~~~~~~~~~l~~~~~~~~i~-----------------------------~~v~~~~~~~~~~~ 136 (213)
++ |.....++ ..-++...+..++--+.+|.+. +...-+++++..+.
T Consensus 172 ~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~r 251 (342)
T PF06433_consen 172 QKSTKVFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGR 251 (342)
T ss_dssp EEEEEESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTE
T ss_pred EeeccccCCCCcccccccceECCCCeEEEEecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeeccccCe
Confidence 22 22222222 2333334444454455666654 33445667664443
Q ss_pred EEEe---cCC-------CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC--eEEEE-ecCCcEEEEeCC
Q psy7433 137 FVTG---AGD-------GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS--RLFSC-GADGSMKVRQLP 203 (213)
Q Consensus 137 l~~~---~~d-------g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~-~~d~~i~iw~~~ 203 (213)
|.+- +.+ ..|-++|+.+++.+..+... .++.++..+.+. +|++. ..++.+.+||..
T Consensus 252 lyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l~-----------~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~ 320 (342)
T PF06433_consen 252 LYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPLE-----------HPIDSIAVSQDDKPLLYALSAGDGTLDVYDAA 320 (342)
T ss_dssp EEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEEEE-----------EEESEEEEESSSS-EEEEEETTTTEEEEEETT
T ss_pred EEEEecCCCCCCccCCceEEEEEECCCCeEEEEEeCC-----------CccceEEEccCCCcEEEEEcCCCCeEEEEeCc
Confidence 3222 111 15777888999999988864 357788888654 46554 457899999999
Q ss_pred CCccc
Q psy7433 204 DRDAV 208 (213)
Q Consensus 204 ~~~~~ 208 (213)
+++.+
T Consensus 321 tGk~~ 325 (342)
T PF06433_consen 321 TGKLV 325 (342)
T ss_dssp T--EE
T ss_pred CCcEE
Confidence 98543
|
4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). |
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.0022 Score=51.38 Aligned_cols=131 Identities=8% Similarity=0.064 Sum_probs=85.2
Q ss_pred EecCCCEEEE-EcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCC---Ccee------eceEEEEEc-
Q psy7433 63 FAPQHQLLIS-AGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGD---GDIK------SPVKCLAID- 131 (213)
Q Consensus 63 ~~~~~~~l~~-~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~---~~i~------~~v~~~~~~- 131 (213)
++|+|+.+.. .-..+.+.+.|.++.+...++.- ......++++|+++++.+.+.+ +... ..-..+.|+
T Consensus 200 lpnDGk~l~~~~ey~~~vSvID~etmeV~~qV~V-dgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfni 278 (635)
T PRK02888 200 LPNDGKDLDDPKKYRSLFTAVDAETMEVAWQVMV-DGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFNI 278 (635)
T ss_pred cCCCCCEeecccceeEEEEEEECccceEEEEEEe-CCCcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEch
Confidence 3445544432 22346677888888777666653 3355788999999999888633 3221 111233333
Q ss_pred -------cCCceEEEecCCCcEEEEEccC-----CeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe--EEEEecCCcE
Q psy7433 132 -------PHEEFFVTGAGDGDIKVWSLSG-----NHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR--LFSCGADGSM 197 (213)
Q Consensus 132 -------~~~~~l~~~~~dg~i~v~d~~~-----~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--l~s~~~d~~i 197 (213)
++|++...+ ++.|.+.|.++ .+.+..+... .....+.++|++. ++++..+..+
T Consensus 279 ~~iea~vkdGK~~~V~--gn~V~VID~~t~~~~~~~v~~yIPVG-----------KsPHGV~vSPDGkylyVanklS~tV 345 (635)
T PRK02888 279 ARIEEAVKAGKFKTIG--GSKVPVVDGRKAANAGSALTRYVPVP-----------KNPHGVNTSPDGKYFIANGKLSPTV 345 (635)
T ss_pred HHHHHhhhCCCEEEEC--CCEEEEEECCccccCCcceEEEEECC-----------CCccceEECCCCCEEEEeCCCCCcE
Confidence 467765553 56899999987 4555555553 5688899999875 5666679999
Q ss_pred EEEeCCCCcc
Q psy7433 198 KVRQLPDRDA 207 (213)
Q Consensus 198 ~iw~~~~~~~ 207 (213)
.|.|+.+.+.
T Consensus 346 SVIDv~k~k~ 355 (635)
T PRK02888 346 TVIDVRKLDD 355 (635)
T ss_pred EEEEChhhhh
Confidence 9999988653
|
|
| >PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.0039 Score=51.65 Aligned_cols=119 Identities=16% Similarity=0.350 Sum_probs=76.6
Q ss_pred cCCCcEEEEeccCceEEEecccCCCC-eeEEEecC------CCCEEEEecCCCcee---------------------ece
Q psy7433 74 GKKGDICVIDLRQRVIRSRFNAHESP-VKCLAIDP------HEEFFVTGAGDGDIK---------------------SPV 125 (213)
Q Consensus 74 ~~d~~v~iwd~~~~~~~~~~~~~~~~-i~~~~~~~------~~~~l~~~~~~~~i~---------------------~~v 125 (213)
.....|+-.|++.|+.+.....+... +..++-.. ....|+.-+.++..+ ...
T Consensus 501 ~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k~Y~~~~~F 580 (794)
T PF08553_consen 501 NNPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQYSSKNNF 580 (794)
T ss_pred CCCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeeccccccccCCCc
Confidence 34578999999999999888765543 44443321 112233333333222 455
Q ss_pred EEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCC
Q psy7433 126 KCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLP 203 (213)
Q Consensus 126 ~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~ 203 (213)
.|++-+.+| +||+|+.+|.|++||--..+....+++ .|.+|.+|..+.+++.+.+..+..+.+++..
T Consensus 581 s~~aTt~~G-~iavgs~~G~IRLyd~~g~~AKT~lp~----------lG~pI~~iDvt~DGkwilaTc~tyLlLi~t~ 647 (794)
T PF08553_consen 581 SCFATTEDG-YIAVGSNKGDIRLYDRLGKRAKTALPG----------LGDPIIGIDVTADGKWILATCKTYLLLIDTL 647 (794)
T ss_pred eEEEecCCc-eEEEEeCCCcEEeecccchhhhhcCCC----------CCCCeeEEEecCCCcEEEEeecceEEEEEEe
Confidence 666655555 699999999999999322222222322 2489999999998887677778888888863
|
Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ]. |
| >PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.0061 Score=45.73 Aligned_cols=162 Identities=14% Similarity=0.172 Sum_probs=88.7
Q ss_pred ccEEEEeCCCc-ccccceeee--eeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCce-EEEecc-cCCCCeeEEEec
Q psy7433 32 KNVCLWDSLLP-QKKALVQAF--VCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRV-IRSRFN-AHESPVKCLAID 106 (213)
Q Consensus 32 ~~i~iwd~~~~-~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~-~~~~~~-~~~~~i~~~~~~ 106 (213)
|.|.++++... .....++.+ ...+++|++++-. ++. |+++. .+.|.+|++...+ ....-. .....+.++...
T Consensus 62 Gri~v~~i~~~~~~~~~l~~i~~~~~~g~V~ai~~~-~~~-lv~~~-g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~ 138 (321)
T PF03178_consen 62 GRILVFEISESPENNFKLKLIHSTEVKGPVTAICSF-NGR-LVVAV-GNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVF 138 (321)
T ss_dssp EEEEEEEECSS-----EEEEEEEEEESS-EEEEEEE-TTE-EEEEE-TTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEE
T ss_pred cEEEEEEEEcccccceEEEEEEEEeecCcceEhhhh-CCE-EEEee-cCEEEEEEccCcccchhhheecceEEEEEEecc
Confidence 89999999542 111222222 2356788888766 444 44443 4789999998776 333222 122345555544
Q ss_pred CCCCEEEEecCCCcee--------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCC-CC
Q psy7433 107 PHEEFFVTGAGDGDIK--------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGE-HA 165 (213)
Q Consensus 107 ~~~~~l~~~~~~~~i~--------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~-~~ 165 (213)
++++++|.....+. ..++++.|-++++.++++..+|.+.++....... ...... ..
T Consensus 139 --~~~I~vgD~~~sv~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~~~~-~~~~~~~~L 215 (321)
T PF03178_consen 139 --KNYILVGDAMKSVSLLRYDEENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNPEIP-NSRDGDPKL 215 (321)
T ss_dssp --TTEEEEEESSSSEEEEEEETTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-SS-S-STTTTTTBE
T ss_pred --ccEEEEEEcccCEEEEEEEccCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEECCCCc-ccccccccc
Confidence 55777777655543 5678888886667999999999999998742110 011111 00
Q ss_pred ceeEEEecCCCeEEE---EeCC--C--C-----eEEEEecCCcEEE
Q psy7433 166 RSSFFKHIGQGVTQL---HVDG--G--S-----RLFSCGADGSMKV 199 (213)
Q Consensus 166 ~~~~~~~~~~~v~~~---~~~~--~--~-----~l~s~~~d~~i~i 199 (213)
.....-+.+..|+++ ...| . . .++-++.+|.|..
T Consensus 216 ~~~~~f~lg~~v~~~~~~~l~~~~~~~~~~~~~~i~~~T~~G~Ig~ 261 (321)
T PF03178_consen 216 ERISSFHLGDIVNSFRRGSLIPRSGSSESPNRPQILYGTVDGSIGV 261 (321)
T ss_dssp EEEEEEE-SS-EEEEEE--SS--SSSS-TTEEEEEEEEETTS-EEE
T ss_pred eeEEEEECCCccceEEEEEeeecCCCCcccccceEEEEecCCEEEE
Confidence 111122334667777 4444 1 1 2778888998884
|
CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A .... |
| >PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.0073 Score=46.50 Aligned_cols=186 Identities=17% Similarity=0.204 Sum_probs=101.9
Q ss_pred ceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCccccc----------------------------------------ce
Q psy7433 9 ITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKA----------------------------------------LV 48 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~----------------------------------------~~ 48 (213)
.|..+.|.++..-|+.+ ...|.|.||.+...+... +.
T Consensus 3 ~v~~vs~a~~t~Elav~---~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~ 79 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVG---LESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPL 79 (395)
T ss_dssp -EEEEEEETTTTEEEEE---ETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEE
T ss_pred eEEEEEecCCCceEEEE---ccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCch
Confidence 58899999987778877 589999999763111000 01
Q ss_pred eeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEec--cc------CCCCeeEEEecC-----CC---CEE
Q psy7433 49 QAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRF--NA------HESPVKCLAIDP-----HE---EFF 112 (213)
Q Consensus 49 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~--~~------~~~~i~~~~~~~-----~~---~~l 112 (213)
..++...++|++++.| |=-+++.|..+|.+.+.|+|....+..- .. ....++++.|.- |+ -.+
T Consensus 80 ~l~~~~~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L 158 (395)
T PF08596_consen 80 TLLDAKQGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICL 158 (395)
T ss_dssp EEE---S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEE
T ss_pred hheeccCCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEE
Confidence 1112235788999887 4458999999999999999887766542 22 234577777762 22 367
Q ss_pred EEecCCCcee------------------------eceEEEE-EccC---------------------CceEEEecCCCcE
Q psy7433 113 VTGAGDGDIK------------------------SPVKCLA-IDPH---------------------EEFFVTGAGDGDI 146 (213)
Q Consensus 113 ~~~~~~~~i~------------------------~~v~~~~-~~~~---------------------~~~l~~~~~dg~i 146 (213)
++|...|.+. .++..+. ++.+ ..++++ ..+..+
T Consensus 159 ~vGTn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVv-vSe~~i 237 (395)
T PF08596_consen 159 LVGTNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVV-VSESDI 237 (395)
T ss_dssp EEEETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEE-E-SSEE
T ss_pred EEEeCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEE-Ecccce
Confidence 7888888765 1111111 2211 013333 335578
Q ss_pred EEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeC-----C-CCeEEEEecCCcEEEEeCCCCcccc
Q psy7433 147 KVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVD-----G-GSRLFSCGADGSMKVRQLPDRDAVV 209 (213)
Q Consensus 147 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-----~-~~~l~s~~~d~~i~iw~~~~~~~~~ 209 (213)
+++...+.+...+..... .....+.+- . ...|++-..+|.++++.+..-+.+.
T Consensus 238 rv~~~~~~k~~~K~~~~~----------~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~ 296 (395)
T PF08596_consen 238 RVFKPPKSKGAHKSFDDP----------FLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIK 296 (395)
T ss_dssp EEE-TT---EEEEE-SS-----------EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEE
T ss_pred EEEeCCCCcccceeeccc----------cccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhh
Confidence 888776655544443211 122223332 1 2247888899999999999876553
|
The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A. |
| >COG3204 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.005 Score=44.51 Aligned_cols=189 Identities=9% Similarity=0.073 Sum_probs=117.5
Q ss_pred ccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeee-cCCceEEEEecCCCEEEEEcCCCcEEEE
Q psy7433 4 QCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCH-DQGASSLVFAPQHQLLISAGKKGDICVI 82 (213)
Q Consensus 4 ~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~v~iw 82 (213)
.|-+..|.++.|+|+.+.|.+. .....-.++=. ..++.+++++-. -.....+.+..++++.++--.++.+.++
T Consensus 82 ~g~~~nvS~LTynp~~rtLFav---~n~p~~iVElt---~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~ 155 (316)
T COG3204 82 LGETANVSSLTYNPDTRTLFAV---TNKPAAIVELT---KEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLF 155 (316)
T ss_pred ccccccccceeeCCCcceEEEe---cCCCceEEEEe---cCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEE
Confidence 3445569999999999988877 34555555543 567777776521 2345567888888888887788888888
Q ss_pred eccCceEEE----------ecccCCCCeeEEEecCCCCEEEEecCCCcee---------------------------ece
Q psy7433 83 DLRQRVIRS----------RFNAHESPVKCLAIDPHEEFFVTGAGDGDIK---------------------------SPV 125 (213)
Q Consensus 83 d~~~~~~~~----------~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~---------------------------~~v 125 (213)
.+.....+. ...........++|.|....|..+-+..-+. ..+
T Consensus 156 ~vd~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~Dv 235 (316)
T COG3204 156 TVDADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDV 235 (316)
T ss_pred EEcCCccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcccccccccCcccccceEeecc
Confidence 776542211 1111245677899999888777766655332 677
Q ss_pred EEEEEccC-CceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEE
Q psy7433 126 KCLAIDPH-EEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVR 200 (213)
Q Consensus 126 ~~~~~~~~-~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw 200 (213)
.++.|++. +.+++-+.+++.+.-.|.. ++.+..+....... -....-..-..++..+++.|...|.-+-.+.+
T Consensus 236 Sgl~~~~~~~~LLVLS~ESr~l~Evd~~-G~~~~~lsL~~g~~-gL~~dipqaEGiamDd~g~lYIvSEPnlfy~F 309 (316)
T COG3204 236 SGLEFNAITNSLLVLSDESRRLLEVDLS-GEVIELLSLTKGNH-GLSSDIPQAEGIAMDDDGNLYIVSEPNLFYRF 309 (316)
T ss_pred ccceecCCCCcEEEEecCCceEEEEecC-CCeeeeEEeccCCC-CCcccCCCcceeEECCCCCEEEEecCCcceec
Confidence 88888875 4577777777877777754 33333322211000 00000124556778877777777776655544
|
|
| >KOG2114|consensus | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.0043 Score=50.86 Aligned_cols=160 Identities=15% Similarity=0.252 Sum_probs=98.3
Q ss_pred cccccCc-eEEEEEeCCCCeEEEeeccCC-Cc-cEEEEeCCCccc---ccce---eeee----eecCCceEEEEecCCCE
Q psy7433 3 YQCHNKI-TSDFVFLGSCSLVATAGHSSE-SK-NVCLWDSLLPQK---KALV---QAFV----CHDQGASSLVFAPQHQL 69 (213)
Q Consensus 3 l~~h~~~-v~~~~~~~~~~~l~~~g~~s~-~~-~i~iwd~~~~~~---~~~~---~~~~----~~~~~v~~~~~~~~~~~ 69 (213)
++++... |..+-...+..+|++.|++.. +. .+++|+++.... ..++ +.+. ....++.+++.+.+-+.
T Consensus 60 fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~ 139 (933)
T KOG2114|consen 60 FQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKT 139 (933)
T ss_pred heecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCCCcceeeeeeeeccCCCCCCCcceEEEEEccccE
Confidence 4555555 444433344578888875222 22 699999963322 2333 2221 12457889999999889
Q ss_pred EEEEcCCCcEEEEecc----CceEEEecccCCCCeeEEEecCCCCE--EEEecCC--------Cc--ee------eceEE
Q psy7433 70 LISAGKKGDICVIDLR----QRVIRSRFNAHESPVKCLAIDPHEEF--FVTGAGD--------GD--IK------SPVKC 127 (213)
Q Consensus 70 l~~~~~d~~v~iwd~~----~~~~~~~~~~~~~~i~~~~~~~~~~~--l~~~~~~--------~~--i~------~~v~~ 127 (213)
++.|-.+|.|..+.=+ .+...........+|+.+++..++.. |++.... .. .. .++.|
T Consensus 140 Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~gr~p~~~~ld~~G~~lnC 219 (933)
T KOG2114|consen 140 IVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKSVLFVATTEQVMLYSLSGRTPSLKVLDNNGISLNC 219 (933)
T ss_pred EEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCceeEEEEecceeEEEEecCCCcceeeeccCCcccee
Confidence 9999999999988432 12222222335678999999887765 3333221 11 11 56778
Q ss_pred EEEccCCceEEEecCCCcEEEEEccCCeeeeeec-CC
Q psy7433 128 LAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFP-GE 163 (213)
Q Consensus 128 ~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~-~~ 163 (213)
..+++....+++++.+ .+.+||.....+...+. ++
T Consensus 220 ss~~~~t~qfIca~~e-~l~fY~sd~~~~cfaf~~g~ 255 (933)
T KOG2114|consen 220 SSFSDGTYQFICAGSE-FLYFYDSDGRGPCFAFEVGE 255 (933)
T ss_pred eecCCCCccEEEecCc-eEEEEcCCCcceeeeecCCC
Confidence 8888765545555443 68999988777777777 44
|
|
| >PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.0065 Score=44.87 Aligned_cols=135 Identities=19% Similarity=0.200 Sum_probs=72.9
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEec-c
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDL-R 85 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~-~ 85 (213)
.+.+..+.-+++|++++++ +......-||--. ....+.. ......+..+.|.|++.+.+.+ ..|.|++=+. .
T Consensus 144 ~gs~~~~~r~~dG~~vavs---~~G~~~~s~~~G~-~~w~~~~--r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~ 216 (302)
T PF14870_consen 144 SGSINDITRSSDGRYVAVS---SRGNFYSSWDPGQ-TTWQPHN--RNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSDDPD 216 (302)
T ss_dssp ---EEEEEE-TTS-EEEEE---TTSSEEEEE-TT--SS-EEEE----SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-TT
T ss_pred cceeEeEEECCCCcEEEEE---CcccEEEEecCCC-ccceEEc--cCccceehhceecCCCCEEEEe-CCcEEEEccCCC
Confidence 4668888889999999998 5555566777510 0111111 1235679999999998776655 7788888772 2
Q ss_pred CceEEEe----cccCCCCeeEEEecCCCCEEEEecCCCcee------------------eceEEEEEccCCceEEEecCC
Q psy7433 86 QRVIRSR----FNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------SPVKCLAIDPHEEFFVTGAGD 143 (213)
Q Consensus 86 ~~~~~~~----~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------~~v~~~~~~~~~~~l~~~~~d 143 (213)
..+.-.. +....-.+..+++.+++...++++....++ ..+..+.|.+..+-++.| .+
T Consensus 217 ~~~~w~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg~G~l~~S~DgGktW~~~~~~~~~~~n~~~i~f~~~~~gf~lG-~~ 295 (302)
T PF14870_consen 217 DGETWSEPIIPIKTNGYGILDLAYRPPNEIWAVGGSGTLLVSTDGGKTWQKDRVGENVPSNLYRIVFVNPDKGFVLG-QD 295 (302)
T ss_dssp EEEEE---B-TTSS--S-EEEEEESSSS-EEEEESTT-EEEESSTTSS-EE-GGGTTSSS---EEEEEETTEEEEE--ST
T ss_pred CccccccccCCcccCceeeEEEEecCCCCEEEEeCCccEEEeCCCCccceECccccCCCCceEEEEEcCCCceEEEC-CC
Confidence 2222111 112233478999999888777766654443 567888888766656555 56
Q ss_pred CcEEEE
Q psy7433 144 GDIKVW 149 (213)
Q Consensus 144 g~i~v~ 149 (213)
|.|--|
T Consensus 296 G~ll~~ 301 (302)
T PF14870_consen 296 GVLLRY 301 (302)
T ss_dssp TEEEEE
T ss_pred cEEEEe
Confidence 666443
|
|
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.0039 Score=48.17 Aligned_cols=166 Identities=13% Similarity=0.143 Sum_probs=91.0
Q ss_pred CeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceE-EEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCCC
Q psy7433 20 SLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASS-LVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHES 98 (213)
Q Consensus 20 ~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~ 98 (213)
..++.+ +.++.+..+|. .+++.+...+... .+.+ ... .+..++.+..++.+.-+|.++|+.+-.+.....
T Consensus 121 ~~v~v~---~~~g~l~ald~---~tG~~~W~~~~~~-~~~ssP~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~ 191 (394)
T PRK11138 121 GKVYIG---SEKGQVYALNA---EDGEVAWQTKVAG-EALSRPVV--SDGLVLVHTSNGMLQALNESDGAVKWTVNLDVP 191 (394)
T ss_pred CEEEEE---cCCCEEEEEEC---CCCCCcccccCCC-ceecCCEE--ECCEEEEECCCCEEEEEEccCCCEeeeecCCCC
Confidence 344444 47889999997 4566655544322 1211 111 244677778889999999999988766643211
Q ss_pred Cee-EEEecC--CCCEEEEecCCCcee------------ece------------EEEEEcc--CCceEEEecCCCcEEEE
Q psy7433 99 PVK-CLAIDP--HEEFFVTGAGDGDIK------------SPV------------KCLAIDP--HEEFFVTGAGDGDIKVW 149 (213)
Q Consensus 99 ~i~-~~~~~~--~~~~l~~~~~~~~i~------------~~v------------~~~~~~~--~~~~l~~~~~dg~i~v~ 149 (213)
... ...-+| .+..++.++.++.+. ..+ ..+.-+| .+..++.++.+|.+..+
T Consensus 192 ~~~~~~~~sP~v~~~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~al 271 (394)
T PRK11138 192 SLTLRGESAPATAFGGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVAL 271 (394)
T ss_pred cccccCCCCCEEECCEEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEE
Confidence 000 000011 122344444454443 000 0011122 24456677788999999
Q ss_pred EccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCcc
Q psy7433 150 SLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 150 d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~ 207 (213)
|..+++.+-...... ...+.. .+++++.++.+|.+..+|..+++.
T Consensus 272 d~~tG~~~W~~~~~~------------~~~~~~-~~~~vy~~~~~g~l~ald~~tG~~ 316 (394)
T PRK11138 272 DLRSGQIVWKREYGS------------VNDFAV-DGGRIYLVDQNDRVYALDTRGGVE 316 (394)
T ss_pred ECCCCCEEEeecCCC------------ccCcEE-ECCEEEEEcCCCeEEEEECCCCcE
Confidence 999988765543211 111122 245677777788888888776643
|
|
| >PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.0012 Score=54.57 Aligned_cols=88 Identities=13% Similarity=0.189 Sum_probs=62.7
Q ss_pred CCccEEEEeCCCcccccceee-e--eeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEec
Q psy7433 30 ESKNVCLWDSLLPQKKALVQA-F--VCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAID 106 (213)
Q Consensus 30 ~~~~i~iwd~~~~~~~~~~~~-~--~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~ 106 (213)
.+..+..||.+... .+++.. . .......+|++-+.+| +||.|+.+|.|++||-...+....+++...+|.++..+
T Consensus 550 s~n~lfriDpR~~~-~k~v~~~~k~Y~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt 627 (794)
T PF08553_consen 550 SDNSLFRIDPRLSG-NKLVDSQSKQYSSKNNFSCFATTEDG-YIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVT 627 (794)
T ss_pred CCCceEEeccCCCC-CceeeccccccccCCCceEEEecCCc-eEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEec
Confidence 68899999997432 222211 1 1234567777777666 79999999999999954444455667778999999999
Q ss_pred CCCCEEEEecCCC
Q psy7433 107 PHEEFFVTGAGDG 119 (213)
Q Consensus 107 ~~~~~l~~~~~~~ 119 (213)
.||+++++.+..-
T Consensus 628 ~DGkwilaTc~ty 640 (794)
T PF08553_consen 628 ADGKWILATCKTY 640 (794)
T ss_pred CCCcEEEEeecce
Confidence 9999877655443
|
Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ]. |
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.0045 Score=49.68 Aligned_cols=132 Identities=11% Similarity=0.102 Sum_probs=85.5
Q ss_pred EeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcC-------------------
Q psy7433 15 FLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGK------------------- 75 (213)
Q Consensus 15 ~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------------------- 75 (213)
+.|||+.+.... -..+.+.+.|. .+.+...++.- .+...-+.++|+++++++.+.
T Consensus 200 lpnDGk~l~~~~--ey~~~vSvID~---etmeV~~qV~V-dgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~ 273 (635)
T PRK02888 200 LPNDGKDLDDPK--KYRSLFTAVDA---ETMEVAWQVMV-DGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWV 273 (635)
T ss_pred cCCCCCEeeccc--ceeEEEEEEEC---ccceEEEEEEe-CCCcccceECCCCCEEEEeccCcccCcceeeeccccCceE
Confidence 345666554332 34566777776 34444444432 224456677777777766641
Q ss_pred ---------------------CCcEEEEeccC-----ceEEEecccCCCCeeEEEecCCCCEEEEecC-CCcee------
Q psy7433 76 ---------------------KGDICVIDLRQ-----RVIRSRFNAHESPVKCLAIDPHEEFFVTGAG-DGDIK------ 122 (213)
Q Consensus 76 ---------------------d~~v~iwd~~~-----~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-~~~i~------ 122 (213)
++.|.+.|.++ .+.+..+. .....+.+.++||++++++++. +..+.
T Consensus 274 vvfni~~iea~vkdGK~~~V~gn~V~VID~~t~~~~~~~v~~yIP-VGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k 352 (635)
T PRK02888 274 VVFNIARIEEAVKAGKFKTIGGSKVPVVDGRKAANAGSALTRYVP-VPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRK 352 (635)
T ss_pred EEEchHHHHHhhhCCCEEEECCCEEEEEECCccccCCcceEEEEE-CCCCccceEECCCCCEEEEeCCCCCcEEEEEChh
Confidence 24577778776 34444444 4566789999999998887765 44433
Q ss_pred ----------------------eceEEEEEccCCceEEEecCCCcEEEEEccC
Q psy7433 123 ----------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSG 153 (213)
Q Consensus 123 ----------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~ 153 (213)
......+|+++|....+-.-|..|..||+.+
T Consensus 353 ~k~~~~~~~~~~~~vvaevevGlGPLHTaFDg~G~aytslf~dsqv~kwn~~~ 405 (635)
T PRK02888 353 LDDLFDGKIKPRDAVVAEPELGLGPLHTAFDGRGNAYTTLFLDSQIVKWNIEA 405 (635)
T ss_pred hhhhhhccCCccceEEEeeccCCCcceEEECCCCCEEEeEeecceeEEEehHH
Confidence 3445678888888777778889999999865
|
|
| >PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.014 Score=45.62 Aligned_cols=52 Identities=19% Similarity=0.184 Sum_probs=30.0
Q ss_pred CCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCce
Q psy7433 67 HQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI 121 (213)
Q Consensus 67 ~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i 121 (213)
|.+|+..+. +.|.+||+.+++.++.+... +|..+.|++++.+++..+.+...
T Consensus 117 G~LL~~~~~-~~i~~yDw~~~~~i~~i~v~--~vk~V~Ws~~g~~val~t~~~i~ 168 (443)
T PF04053_consen 117 GNLLGVKSS-DFICFYDWETGKLIRRIDVS--AVKYVIWSDDGELVALVTKDSIY 168 (443)
T ss_dssp SSSEEEEET-TEEEEE-TTT--EEEEESS---E-EEEEE-TTSSEEEEE-S-SEE
T ss_pred CcEEEEECC-CCEEEEEhhHcceeeEEecC--CCcEEEEECCCCEEEEEeCCeEE
Confidence 555555544 36888888888877777632 37788888888877777766543
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B. |
| >COG3490 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.0011 Score=47.63 Aligned_cols=56 Identities=25% Similarity=0.361 Sum_probs=46.3
Q ss_pred EEecCCCEEEEEcCC-----CcEEEEeccCc-eEEEecccCCCCeeEEEecCCCCEEEEecC
Q psy7433 62 VFAPQHQLLISAGKK-----GDICVIDLRQR-VIRSRFNAHESPVKCLAIDPHEEFFVTGAG 117 (213)
Q Consensus 62 ~~~~~~~~l~~~~~d-----~~v~iwd~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 117 (213)
.|||+|.+|++.-.| |.|-+||.+.+ +.+.++..|.-....+.+.+||+.++.+..
T Consensus 120 vfs~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvanG 181 (366)
T COG3490 120 VFSPDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVANG 181 (366)
T ss_pred ccCCCCcEEEeecCCCCCCCceEEEEecccccceecccccCCcCcceeEEecCCcEEEEeCC
Confidence 589999999876433 78999999865 667788888888899999999999887654
|
|
| >PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.0037 Score=38.47 Aligned_cols=84 Identities=14% Similarity=0.158 Sum_probs=54.0
Q ss_pred eEEEEEeC---CC-CeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEecc
Q psy7433 10 TSDFVFLG---SC-SLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLR 85 (213)
Q Consensus 10 v~~~~~~~---~~-~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~ 85 (213)
|++|++.. +| +.|+.+ +.|..|++|+- ...+..+.. ...|+.++-... ..++.+..+|+|-+|+-.
T Consensus 2 V~al~~~d~d~dg~~eLlvG---s~D~~IRvf~~-----~e~~~Ei~e-~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~ 71 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVG---SDDFEIRVFKG-----DEIVAEITE-TDKVTSLCSLGG-GRFAYALANGTVGVYDRS 71 (111)
T ss_pred eeEEEEEecCCCCcceEEEe---cCCcEEEEEeC-----CcEEEEEec-ccceEEEEEcCC-CEEEEEecCCEEEEEeCc
Confidence 67777765 32 467777 79999999984 345555543 355777766655 578889999999999753
Q ss_pred CceEEEecccCCCCeeEEEec
Q psy7433 86 QRVIRSRFNAHESPVKCLAID 106 (213)
Q Consensus 86 ~~~~~~~~~~~~~~i~~~~~~ 106 (213)
. .+-.++. ...+.++++.
T Consensus 72 ~--RlWRiKS-K~~~~~~~~~ 89 (111)
T PF14783_consen 72 Q--RLWRIKS-KNQVTSMAFY 89 (111)
T ss_pred c--eeeeecc-CCCeEEEEEE
Confidence 3 3333332 2335555544
|
|
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.012 Score=43.76 Aligned_cols=118 Identities=12% Similarity=0.131 Sum_probs=75.1
Q ss_pred CCceEEEEecCCCEEEEEcC---------CCcEEEEecc-CceEEEecccCCCCeeEEEecCCCCEEEEecCC-Ccee--
Q psy7433 56 QGASSLVFAPQHQLLISAGK---------KGDICVIDLR-QRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGD-GDIK-- 122 (213)
Q Consensus 56 ~~v~~~~~~~~~~~l~~~~~---------d~~v~iwd~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~-~~i~-- 122 (213)
...+.+...|+|.+.+.... ...-.+|.+. .+.....+..+-...+.++|+||++.|..+... +.+.
T Consensus 111 ~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~ 190 (307)
T COG3386 111 NRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRY 190 (307)
T ss_pred CCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCCCEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEEE
Confidence 34567888899886665433 1112455554 455555555555667899999999877776553 3332
Q ss_pred ----------------------eceEEEEEccCCceEEEecCCC-cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEE
Q psy7433 123 ----------------------SPVKCLAIDPHEEFFVTGAGDG-DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQ 179 (213)
Q Consensus 123 ----------------------~~v~~~~~~~~~~~l~~~~~dg-~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 179 (213)
...-.++...+|.+.+++-.+| .|.+|+.. ++.+..+..+. ..+++
T Consensus 191 ~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G~l~~~i~lP~----------~~~t~ 259 (307)
T COG3386 191 DLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-GKLLGEIKLPV----------KRPTN 259 (307)
T ss_pred ecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC-CcEEEEEECCC----------CCCcc
Confidence 2223344555666665554444 89999887 88888888775 45777
Q ss_pred EEeCC
Q psy7433 180 LHVDG 184 (213)
Q Consensus 180 ~~~~~ 184 (213)
++|--
T Consensus 260 ~~FgG 264 (307)
T COG3386 260 PAFGG 264 (307)
T ss_pred ceEeC
Confidence 77763
|
|
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.0021 Score=49.87 Aligned_cols=99 Identities=15% Similarity=0.110 Sum_probs=62.1
Q ss_pred EEEEeCCCCeEEEeeccCCCcc--EEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcC-CC--cEEEEeccC
Q psy7433 12 DFVFLGSCSLVATAGHSSESKN--VCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGK-KG--DICVIDLRQ 86 (213)
Q Consensus 12 ~~~~~~~~~~l~~~g~~s~~~~--i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~--~v~iwd~~~ 86 (213)
.-+|+|||+.|+.+. ..|+. |.+.|+.. +.+..+....+.-..-.|+|+|++++-.++ .| .|.+++.+.
T Consensus 242 ~P~fspDG~~l~f~~--~rdg~~~iy~~dl~~----~~~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g 315 (425)
T COG0823 242 APAFSPDGSKLAFSS--SRDGSPDIYLMDLDG----KNLPRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEG 315 (425)
T ss_pred CccCCCCCCEEEEEE--CCCCCccEEEEcCCC----CcceecccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCC
Confidence 457999999998886 45565 55556532 223334433343446789999998876543 34 466667666
Q ss_pred ceEEEecccCCCCeeEEEecCCCCEEEEecC
Q psy7433 87 RVIRSRFNAHESPVKCLAIDPHEEFFVTGAG 117 (213)
Q Consensus 87 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 117 (213)
+.. ..+......-..-.|+|+|++++..+.
T Consensus 316 ~~~-~riT~~~~~~~~p~~SpdG~~i~~~~~ 345 (425)
T COG0823 316 SQV-TRLTFSGGGNSNPVWSPDGDKIVFESS 345 (425)
T ss_pred Cce-eEeeccCCCCcCccCCCCCCEEEEEec
Confidence 554 333333333337889999999888774
|
|
| >PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.0051 Score=37.87 Aligned_cols=86 Identities=15% Similarity=0.189 Sum_probs=58.4
Q ss_pred ceEEEEec---CC-CEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------
Q psy7433 58 ASSLVFAP---QH-QLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----------- 122 (213)
Q Consensus 58 v~~~~~~~---~~-~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------- 122 (213)
|+++++.. +| +.|++|+.|..|++|+-. +.+..+. ....++++.-... ..|+.+..+|++-
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~--e~~~Ei~-e~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~~RlWRi 77 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGD--EIVAEIT-ETDKVTSLCSLGG-GRFAYALANGTVGVYDRSQRLWRI 77 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCC--cEEEEEe-cccceEEEEEcCC-CEEEEEecCCEEEEEeCcceeeee
Confidence 56777654 22 689999999999999743 5666665 3456777776665 5688888888874
Q ss_pred ---eceEEEEEcc-C--Cc-eEEEecCCCcEE
Q psy7433 123 ---SPVKCLAIDP-H--EE-FFVTGAGDGDIK 147 (213)
Q Consensus 123 ---~~v~~~~~~~-~--~~-~l~~~~~dg~i~ 147 (213)
..+.++.+.. + |. -|++|-.+|.|.
T Consensus 78 KSK~~~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 78 KSKNQVTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred ccCCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 4455555433 2 22 577777777664
|
|
| >PRK13616 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.0063 Score=49.34 Aligned_cols=139 Identities=11% Similarity=0.082 Sum_probs=81.1
Q ss_pred CCceEEEEecCCCEEEEEc------CCC--cEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCC---------
Q psy7433 56 QGASSLVFAPQHQLLISAG------KKG--DICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGD--------- 118 (213)
Q Consensus 56 ~~v~~~~~~~~~~~l~~~~------~d~--~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~--------- 118 (213)
..+...+++|+|+.++... .|. .|.+++. .+.. ..+.. ....+.-.|+|++..+++....
T Consensus 350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~-gg~~-~~lt~-g~~~t~PsWspDG~~lw~v~dg~~~~~v~~~ 426 (591)
T PRK13616 350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPL-GGVA-VQVLE-GHSLTRPSWSLDADAVWVVVDGNTVVRVIRD 426 (591)
T ss_pred cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeC-CCcc-eeeec-CCCCCCceECCCCCceEEEecCcceEEEecc
Confidence 4678899999999887654 233 4555554 2222 22321 2237888999998866665422
Q ss_pred ---Ccee--------------eceEEEEEccCCceEEEecCCCcEEEE---EccCCeeeeeecCCCCceeEEEecCCCeE
Q psy7433 119 ---GDIK--------------SPVKCLAIDPHEEFFVTGAGDGDIKVW---SLSGNHLLYNFPGEHARSSFFKHIGQGVT 178 (213)
Q Consensus 119 ---~~i~--------------~~v~~~~~~~~~~~l~~~~~dg~i~v~---d~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 178 (213)
+.+. ..|..+.|||||..++... ++.|.+= ....+. ..+.... ......+..+.
T Consensus 427 ~~~gql~~~~vd~ge~~~~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~--~~l~~~~---~l~~~l~~~~~ 500 (591)
T PRK13616 427 PATGQLARTPVDASAVASRVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQ--YALTNPR---EVGPGLGDTAV 500 (591)
T ss_pred CCCceEEEEeccCchhhhccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCc--eeecccE---EeecccCCccc
Confidence 2221 4699999999999777665 4677663 322332 2221110 00011123468
Q ss_pred EEEeCCCCeEEEEecCCcEEEEeCC
Q psy7433 179 QLHVDGGSRLFSCGADGSMKVRQLP 203 (213)
Q Consensus 179 ~~~~~~~~~l~s~~~d~~i~iw~~~ 203 (213)
.+.|.+++.|+.+..++...+|.+.
T Consensus 501 ~l~W~~~~~L~V~~~~~~~~v~~v~ 525 (591)
T PRK13616 501 SLDWRTGDSLVVGRSDPEHPVWYVN 525 (591)
T ss_pred cceEecCCEEEEEecCCCCceEEEe
Confidence 8999988877776665555555543
|
|
| >PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.021 Score=44.13 Aligned_cols=86 Identities=8% Similarity=0.121 Sum_probs=54.4
Q ss_pred eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecC-CCeE--EEEeC----CC-Ce--EEEEe
Q psy7433 123 SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIG-QGVT--QLHVD----GG-SR--LFSCG 192 (213)
Q Consensus 123 ~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~-~~v~--~~~~~----~~-~~--l~s~~ 192 (213)
..+.++..+|++++.++...-|+|.++|+.++..+..+++-......+.... ..-. .-... +. .. ++-.-
T Consensus 308 R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~LvIyap 387 (415)
T PF14655_consen 308 REGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFALFLVIYAP 387 (415)
T ss_pred ceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcceEEEEEEec
Confidence 4578899999999888887789999999999888888777543221111000 0000 00000 00 11 23345
Q ss_pred cCCcEEEEeCCCCccc
Q psy7433 193 ADGSMKVRQLPDRDAV 208 (213)
Q Consensus 193 ~d~~i~iw~~~~~~~~ 208 (213)
.-|.|.||.++.+..+
T Consensus 388 rRg~lEvW~~~~g~Rv 403 (415)
T PF14655_consen 388 RRGILEVWSMRQGPRV 403 (415)
T ss_pred cCCeEEEEecCCCCEE
Confidence 6889999999988665
|
|
| >PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators [] | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.0096 Score=42.72 Aligned_cols=150 Identities=13% Similarity=0.154 Sum_probs=80.6
Q ss_pred eeeeecCCceEEEEecCCC-EEEEEcCCCcEEEEeccCceEEEecccC-CCCeeEEEecCCCCEEEEecCCCcee-----
Q psy7433 50 AFVCHDQGASSLVFAPQHQ-LLISAGKKGDICVIDLRQRVIRSRFNAH-ESPVKCLAIDPHEEFFVTGAGDGDIK----- 122 (213)
Q Consensus 50 ~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~~~~i~----- 122 (213)
.+.+-...+..+.|+|+.+ ++++....+.|..++. +|+.++.++-. .+..-.+++..++.++++.-.++.+.
T Consensus 16 ~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~ 94 (248)
T PF06977_consen 16 PLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTID 94 (248)
T ss_dssp E-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE-
T ss_pred ECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEEe
Confidence 3444556799999999755 5666677788888886 47777776533 35577888877666555543455442
Q ss_pred -----------------------eceEEEEEccCCceEEEecCCCcEEEEEccC---CeeeeeecCCCCceeEEEecCCC
Q psy7433 123 -----------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSG---NHLLYNFPGEHARSSFFKHIGQG 176 (213)
Q Consensus 123 -----------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~---~~~~~~~~~~~~~~~~~~~~~~~ 176 (213)
..+..++|+|.++.|+++-+..-..+|.++. ...+.......... .......
T Consensus 95 ~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~d 172 (248)
T PF06977_consen 95 DDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDD--DKLFVRD 172 (248)
T ss_dssp ---TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH---HT--SS-
T ss_pred ccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeecccccccc--ccceecc
Confidence 4578899999877777776666667776653 11111110000000 0001145
Q ss_pred eEEEEeCCC-Ce-EEEEecCCcEEEEeC
Q psy7433 177 VTQLHVDGG-SR-LFSCGADGSMKVRQL 202 (213)
Q Consensus 177 v~~~~~~~~-~~-l~s~~~d~~i~iw~~ 202 (213)
+.++.++|. +. ++....+..+..+|.
T Consensus 173 ~S~l~~~p~t~~lliLS~es~~l~~~d~ 200 (248)
T PF06977_consen 173 LSGLSYDPRTGHLLILSDESRLLLELDR 200 (248)
T ss_dssp --EEEEETTTTEEEEEETTTTEEEEE-T
T ss_pred ccceEEcCCCCeEEEEECCCCeEEEECC
Confidence 788888883 33 555555666777773
|
Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A. |
| >PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00035 Score=36.03 Aligned_cols=33 Identities=18% Similarity=0.344 Sum_probs=29.2
Q ss_pred cCCceEEEEecCCCEEEEEcCCCcEEEEeccCce
Q psy7433 55 DQGASSLVFAPQHQLLISAGKKGDICVIDLRQRV 88 (213)
Q Consensus 55 ~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~ 88 (213)
...|..++|+|...+||.+..+|.|.++++ +++
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~q 43 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQ 43 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCc
Confidence 356899999999999999999999999998 444
|
|
| >PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00034 Score=36.04 Aligned_cols=34 Identities=26% Similarity=0.568 Sum_probs=28.3
Q ss_pred eeeceEEEEEccCCceEEEecCCCcEEEEEccCCe
Q psy7433 121 IKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNH 155 (213)
Q Consensus 121 i~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~ 155 (213)
+...|.+++|+|...++|.++.+|.|.++.+ +++
T Consensus 10 l~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~q 43 (47)
T PF12894_consen 10 LPSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQ 43 (47)
T ss_pred CCCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCc
Confidence 3356888999999999999999999999988 443
|
|
| >KOG3617|consensus | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00026 Score=57.79 Aligned_cols=93 Identities=15% Similarity=0.157 Sum_probs=70.6
Q ss_pred eEEEecCCCCEEEEecCC----Ccee---------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeec
Q psy7433 101 KCLAIDPHEEFFVTGAGD----GDIK---------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFP 161 (213)
Q Consensus 101 ~~~~~~~~~~~l~~~~~~----~~i~---------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~ 161 (213)
+-.+|+|....|++++.. |.+. ..+++++|+|..-.|+.|-.-|.+.+|...+.+.-....
T Consensus 19 ti~SWHPsePlfAVA~fS~er~GSVtIfadtGEPqr~Vt~P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~htv~~ 98 (1416)
T KOG3617|consen 19 TISSWHPSEPLFAVASFSPERGGSVTIFADTGEPQRDVTYPVHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHTVVE 98 (1416)
T ss_pred cccccCCCCceeEEEEecCCCCceEEEEecCCCCCcccccceehhhhccChHHHHHhhccccceeEEEecCCceeeeecc
Confidence 445677776666666542 2221 566789999988889999889999999987666555555
Q ss_pred CCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCC
Q psy7433 162 GEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLP 203 (213)
Q Consensus 162 ~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~ 203 (213)
.|. .+|..+.|++++ .++++..-|.+.+|.+.
T Consensus 99 th~----------a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 99 THP----------APIQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred CCC----------CCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 554 789999999964 69999999999999887
|
|
| >PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0047 Score=47.54 Aligned_cols=143 Identities=17% Similarity=0.210 Sum_probs=80.3
Q ss_pred CceEEEEecCCCEEEEEcCCCcEEEEeccCceEEE--ec-------------ccCCCCeeEEEecCCCC----EEEEecC
Q psy7433 57 GASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRS--RF-------------NAHESPVKCLAIDPHEE----FFVTGAG 117 (213)
Q Consensus 57 ~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~--~~-------------~~~~~~i~~~~~~~~~~----~l~~~~~ 117 (213)
.|+.+.|.++...|+.+...|.|.+|.....+... .. ....+.+..+.--.+.. ++-..--
T Consensus 3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~ 82 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL 82 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence 47889999998899999999999999876543221 00 00112222221100000 0000000
Q ss_pred CCceeeceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCC-----CC----eE
Q psy7433 118 DGDIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG-----GS----RL 188 (213)
Q Consensus 118 ~~~i~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-----~~----~l 188 (213)
+-. .++|++++.|.- .+++.|.++|.+.|.|+|....++.-.... ...-......++++.|.. |+ .+
T Consensus 83 ~~~-~g~vtal~~S~i-GFvaigy~~G~l~viD~RGPavI~~~~i~~--~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L 158 (395)
T PF08596_consen 83 DAK-QGPVTALKNSDI-GFVAIGYESGSLVVIDLRGPAVIYNENIRE--SFLSKSSSSYVTSIEFSVMTLGGDGYSSICL 158 (395)
T ss_dssp ----S-SEEEEEE-BT-SEEEEEETTSEEEEEETTTTEEEEEEEGGG----T-SS----EEEEEEEEEE-TTSSSEEEEE
T ss_pred ecc-CCcEeEEecCCC-cEEEEEecCCcEEEEECCCCeEEeeccccc--cccccccccCeeEEEEEEEecCCCcccceEE
Confidence 001 288999999744 489999999999999999988877632211 000001125688888862 33 37
Q ss_pred EEEecCCcEEEEeCC
Q psy7433 189 FSCGADGSMKVRQLP 203 (213)
Q Consensus 189 ~s~~~d~~i~iw~~~ 203 (213)
++|...|.+.+|.+.
T Consensus 159 ~vGTn~G~v~~fkIl 173 (395)
T PF08596_consen 159 LVGTNSGNVLTFKIL 173 (395)
T ss_dssp EEEETTSEEEEEEEE
T ss_pred EEEeCCCCEEEEEEe
Confidence 888999999999875
|
The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A. |
| >KOG4649|consensus | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.026 Score=40.34 Aligned_cols=116 Identities=15% Similarity=0.117 Sum_probs=73.7
Q ss_pred eCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEeccc
Q psy7433 16 LGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNA 95 (213)
Q Consensus 16 ~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~ 95 (213)
.++.+.++..| +..+.+.--|. +.++.+.... -...+.+-+.- -|+.++.|..+|.+++.+..+|.....+..
T Consensus 19 ~~dskT~v~ig--SHs~~~~avd~---~sG~~~We~i-lg~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~ 91 (354)
T KOG4649|consen 19 CNDSKTLVVIG--SHSGIVIAVDP---QSGNLIWEAI-LGVRIECSAIV-VGDFVVLGCYSGGLYFLCVKTGSQIWNFVI 91 (354)
T ss_pred ecCCceEEEEe--cCCceEEEecC---CCCcEEeehh-hCceeeeeeEE-ECCEEEEEEccCcEEEEEecchhheeeeee
Confidence 34444444443 77888888887 4554443311 11222222222 467899999999999999999977666543
Q ss_pred CCCCeeEEEecCCCCEEEEecCCCceeeceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCC
Q psy7433 96 HESPVKCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGE 163 (213)
Q Consensus 96 ~~~~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~ 163 (213)
-.. |.+ .....+++..+..|+.|+..+..|.++..++.+.+..
T Consensus 92 ~~~-vk~------------------------~a~~d~~~glIycgshd~~~yalD~~~~~cVykskcg 134 (354)
T KOG4649|consen 92 LET-VKV------------------------RAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCG 134 (354)
T ss_pred hhh-hcc------------------------ceEEcCCCceEEEecCCCcEEEecccccceEEecccC
Confidence 211 111 0113345678999999999999999998888886654
|
|
| >COG3204 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.029 Score=40.72 Aligned_cols=153 Identities=12% Similarity=0.112 Sum_probs=87.0
Q ss_pred eeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccC-CCCeeEEEecCCCCEEEEecCCCcee--------
Q psy7433 52 VCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAH-ESPVKCLAIDPHEEFFVTGAGDGDIK-------- 122 (213)
Q Consensus 52 ~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~~~~i~-------- 122 (213)
.+....+.++.|+|+.+.|++......-.++=..+|+.++.++-. -.....+.+...+.+.++-=.+..+.
T Consensus 82 ~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~t 161 (316)
T COG3204 82 LGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDADT 161 (316)
T ss_pred ccccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcCCc
Confidence 344566999999999999998887777777766778877776521 11223344443333222222222221
Q ss_pred -------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeC
Q psy7433 123 -------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVD 183 (213)
Q Consensus 123 -------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 183 (213)
.....++|+|..+.|..+-+..-+.||.+..............+.....-.-..|.++.++
T Consensus 162 ~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~DvSgl~~~ 241 (316)
T COG3204 162 TVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDVSGLEFN 241 (316)
T ss_pred cEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcccccccccCcccccceEeeccccceec
Confidence 4667899999998888888888888887753221111111111111111111457778887
Q ss_pred C-CC-eEEEEecCCcEEEEeCCC
Q psy7433 184 G-GS-RLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 184 ~-~~-~l~s~~~d~~i~iw~~~~ 204 (213)
+ .+ .|+-+..++.+.-.|...
T Consensus 242 ~~~~~LLVLS~ESr~l~Evd~~G 264 (316)
T COG3204 242 AITNSLLVLSDESRRLLEVDLSG 264 (316)
T ss_pred CCCCcEEEEecCCceEEEEecCC
Confidence 6 23 455555555655555544
|
|
| >PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.036 Score=41.58 Aligned_cols=108 Identities=8% Similarity=0.047 Sum_probs=65.2
Q ss_pred ccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEecc
Q psy7433 6 HNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLR 85 (213)
Q Consensus 6 h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~ 85 (213)
..++|++++-- ++.++++. ++.|.+|++.. .+.+.....+..++........+++++.|.....+.++..+
T Consensus 87 ~~g~V~ai~~~-~~~lv~~~-----g~~l~v~~l~~---~~~l~~~~~~~~~~~i~sl~~~~~~I~vgD~~~sv~~~~~~ 157 (321)
T PF03178_consen 87 VKGPVTAICSF-NGRLVVAV-----GNKLYVYDLDN---SKTLLKKAFYDSPFYITSLSVFKNYILVGDAMKSVSLLRYD 157 (321)
T ss_dssp ESS-EEEEEEE-TTEEEEEE-----TTEEEEEEEET---TSSEEEEEEE-BSSSEEEEEEETTEEEEEESSSSEEEEEEE
T ss_pred ecCcceEhhhh-CCEEEEee-----cCEEEEEEccC---cccchhhheecceEEEEEEeccccEEEEEEcccCEEEEEEE
Confidence 46789998765 45544444 68999999943 22233333333434444444456799999888888887554
Q ss_pred C-ceEEEecc--cCCCCeeEEEecCCCCEEEEecCCCcee
Q psy7433 86 Q-RVIRSRFN--AHESPVKCLAIDPHEEFFVTGAGDGDIK 122 (213)
Q Consensus 86 ~-~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~~~~i~ 122 (213)
. ...+..+. .....++++.+-++++.++++..+|.+.
T Consensus 158 ~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~ 197 (321)
T PF03178_consen 158 EENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLF 197 (321)
T ss_dssp TTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEE
T ss_pred ccCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEE
Confidence 3 33222222 2344578888886667888888888764
|
CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A .... |
| >KOG2079|consensus | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0023 Score=53.63 Aligned_cols=71 Identities=25% Similarity=0.493 Sum_probs=52.4
Q ss_pred eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCC-CeEEEEecCCcEEEEe
Q psy7433 123 SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG-SRLFSCGADGSMKVRQ 201 (213)
Q Consensus 123 ~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~d~~i~iw~ 201 (213)
.+|++++|+.+|+.++.|-.+|.|.+||+..++.+..+..+..+. ..+..+.+..+ ..++++...|+ +|.
T Consensus 131 ~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~-------t~vi~v~~t~~nS~llt~D~~Gs--f~~ 201 (1206)
T KOG2079|consen 131 GPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPV-------TGVIFVGRTSQNSKLLTSDTGGS--FWK 201 (1206)
T ss_pred CcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCcc-------ceEEEEEEeCCCcEEEEccCCCc--eEE
Confidence 899999999999999999999999999999888887777665321 23333334333 34777766665 555
Q ss_pred C
Q psy7433 202 L 202 (213)
Q Consensus 202 ~ 202 (213)
+
T Consensus 202 l 202 (1206)
T KOG2079|consen 202 L 202 (1206)
T ss_pred E
Confidence 4
|
|
| >COG3391 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.052 Score=41.83 Aligned_cols=179 Identities=14% Similarity=0.237 Sum_probs=113.8
Q ss_pred EEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcC---CCcEEEEeccCc
Q psy7433 11 SDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGK---KGDICVIDLRQR 87 (213)
Q Consensus 11 ~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~v~iwd~~~~ 87 (213)
..+++++.+..+.... ..+..|.+.|. ..........- ......++++|+++.++.+.. ++.+.+.|..+.
T Consensus 77 ~~i~v~~~~~~vyv~~--~~~~~v~vid~---~~~~~~~~~~v-G~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~ 150 (381)
T COG3391 77 AGVAVNPAGNKVYVTT--GDSNTVSVIDT---ATNTVLGSIPV-GLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATN 150 (381)
T ss_pred cceeeCCCCCeEEEec--CCCCeEEEEcC---cccceeeEeee-ccCCceEEECCCCCEEEEEecccCCceEEEEeCCCC
Confidence 4567777777444331 35789999996 34444444332 226678999999987776655 688999999988
Q ss_pred eEEEecccCCCCeeEEEecCCCCEEEEec-CCCcee---------------------eceEEEEEccCCceEEEecCC--
Q psy7433 88 VIRSRFNAHESPVKCLAIDPHEEFFVTGA-GDGDIK---------------------SPVKCLAIDPHEEFFVTGAGD-- 143 (213)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~~~~i~---------------------~~v~~~~~~~~~~~l~~~~~d-- 143 (213)
+..........+ ..++++|++..+.+.. .++.+. .....+.++|++.++.+....
T Consensus 151 ~~~~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~ 229 (381)
T COG3391 151 KVTATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSG 229 (381)
T ss_pred eEEEEEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceeccccccccccCCCCceEEECCCCCEEEEEeccCC
Confidence 888775544444 8999999999766665 344333 233567888888855555433
Q ss_pred -CcEEEEEccCCeeeee-ecCCCCceeEEEecCCCeEEEEeCCCCe-EEEE-ecCCcEEEEeCCCCc
Q psy7433 144 -GDIKVWSLSGNHLLYN-FPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSC-GADGSMKVRQLPDRD 206 (213)
Q Consensus 144 -g~i~v~d~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~-~~d~~i~iw~~~~~~ 206 (213)
+.+...|..++..... ..... . ....+..+|++. +.+. ...+.+.+-|..+..
T Consensus 230 ~~~v~~id~~~~~v~~~~~~~~~---------~-~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~~ 286 (381)
T COG3391 230 SNNVLKIDTATGNVTATDLPVGS---------G-APRGVAVDPAGKAAYVANSQGGTVSVIDGATDR 286 (381)
T ss_pred CceEEEEeCCCceEEEecccccc---------C-CCCceeECCCCCEEEEEecCCCeEEEEeCCCCc
Confidence 5788888877666554 22211 0 244566677553 3333 334677777766643
|
|
| >PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.045 Score=40.90 Aligned_cols=137 Identities=12% Similarity=0.151 Sum_probs=81.4
Q ss_pred ccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEc----------CCCcEEEEeccCceEEEecccCCC-Ce
Q psy7433 32 KNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG----------KKGDICVIDLRQRVIRSRFNAHES-PV 100 (213)
Q Consensus 32 ~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~v~iwd~~~~~~~~~~~~~~~-~i 100 (213)
+.+.++|. .+++.+..+.. +-...+..+|+++.+++++ ..-.|.+||..+-.+...+.-... ..
T Consensus 17 ~rv~viD~---d~~k~lGmi~~--g~~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~ 91 (342)
T PF06433_consen 17 SRVYVIDA---DSGKLLGMIDT--GFLGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRA 91 (342)
T ss_dssp EEEEEEET---TTTEEEEEEEE--ESSEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B-
T ss_pred ceEEEEEC---CCCcEEEEeec--ccCCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchh
Confidence 57999997 45666666543 3334467899999888653 234699999999877765542222 11
Q ss_pred eEEEecCCCCEEEEecCCCceeeceEEEEEccCCceEEEe--cCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeE
Q psy7433 101 KCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPHEEFFVTG--AGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVT 178 (213)
Q Consensus 101 ~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~~~~l~~~--~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 178 (213)
..+.. ...+.++.++++++.. +-...|.|.|+...+.+..+..+ .+.
T Consensus 92 ~~~~~-------------------~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~P------------GC~ 140 (342)
T PF06433_consen 92 QVVPY-------------------KNMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDTP------------GCW 140 (342)
T ss_dssp -BS---------------------GGGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEGT------------SEE
T ss_pred eeccc-------------------ccceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecCC------------CEE
Confidence 11100 1123445555544444 33456888898888888777663 244
Q ss_pred EEEeCCCCeEEEEecCCcEEEEeCCC
Q psy7433 179 QLHVDGGSRLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 179 ~~~~~~~~~l~s~~~d~~i~iw~~~~ 204 (213)
.+.-.++..+.+.+.||++.-..+..
T Consensus 141 ~iyP~~~~~F~~lC~DGsl~~v~Ld~ 166 (342)
T PF06433_consen 141 LIYPSGNRGFSMLCGDGSLLTVTLDA 166 (342)
T ss_dssp EEEEEETTEEEEEETTSCEEEEEETS
T ss_pred EEEecCCCceEEEecCCceEEEEECC
Confidence 44434344577777788777777764
|
4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). |
| >KOG2395|consensus | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.022 Score=44.62 Aligned_cols=150 Identities=17% Similarity=0.313 Sum_probs=88.3
Q ss_pred CCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCC--E-----EEEEcCCCcEEEEeccCceEE
Q psy7433 18 SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQ--L-----LISAGKKGDICVIDLRQRVIR 90 (213)
Q Consensus 18 ~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~-----l~~~~~d~~v~iwd~~~~~~~ 90 (213)
+.++|...| ..-..++-.|+ +.++.+..+..+.. |+-+.+.|+.+ . -+.|-.+..|.-||.+-...
T Consensus 344 dsnlil~~~--~~~~~l~klDI---E~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~- 416 (644)
T KOG2395|consen 344 DSNLILMDG--GEQDKLYKLDI---ERGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGK- 416 (644)
T ss_pred ccceEeeCC--CCcCcceeeec---ccceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCc-
Confidence 445555544 24456666777 67888888876666 77777877543 2 23455677888898872111
Q ss_pred EecccCCCCeeEEEecCCCCEEEEecCCCceeeceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEE
Q psy7433 91 SRFNAHESPVKCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFF 170 (213)
Q Consensus 91 ~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~ 170 (213)
..++|.. ++.+.+ +....|.+=..+ .++++|+.+|.|++||--..+....+++-
T Consensus 417 ----------~kl~~~q-~kqy~~-------k~nFsc~aTT~s-G~IvvgS~~GdIRLYdri~~~AKTAlPgL------- 470 (644)
T KOG2395|consen 417 ----------NKLAVVQ-SKQYST-------KNNFSCFATTES-GYIVVGSLKGDIRLYDRIGRRAKTALPGL------- 470 (644)
T ss_pred ----------ceeeeee-cccccc-------ccccceeeecCC-ceEEEeecCCcEEeehhhhhhhhhccccc-------
Confidence 0111110 011100 011222222222 37999999999999996322333334443
Q ss_pred EecCCCeEEEEeCCCCeEEEEecCCcEEEEeCC
Q psy7433 171 KHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLP 203 (213)
Q Consensus 171 ~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~ 203 (213)
+.+|..+..+.++..+.+..+..+.+-++.
T Consensus 471 ---G~~I~hVdvtadGKwil~Tc~tyLlLi~t~ 500 (644)
T KOG2395|consen 471 ---GDAIKHVDVTADGKWILATCKTYLLLIDTL 500 (644)
T ss_pred ---CCceeeEEeeccCcEEEEecccEEEEEEEe
Confidence 378999999888876666677777777654
|
|
| >PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.064 Score=40.90 Aligned_cols=62 Identities=15% Similarity=0.063 Sum_probs=39.2
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeee-------e---------cCCceEEEEecCCCEE
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVC-------H---------DQGASSLVFAPQHQLL 70 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~-------~---------~~~v~~~~~~~~~~~l 70 (213)
...+....|+|+|+.+|.. .++.|.+++....... .+ +..+ - -+.-..+.|||++++|
T Consensus 42 ~~~~~~~~~sP~g~~~~~v----~~~nly~~~~~~~~~~-~l-T~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~l 115 (353)
T PF00930_consen 42 PPKLQDAKWSPDGKYIAFV----RDNNLYLRDLATGQET-QL-TTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYL 115 (353)
T ss_dssp ETTBSEEEE-SSSTEEEEE----ETTEEEEESSTTSEEE-ES-ES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEE
T ss_pred ccccccceeecCCCeeEEE----ecCceEEEECCCCCeE-Ee-ccccceeEEcCccceeccccccccccceEECCCCCEE
Confidence 3567889999999999998 6889999987432111 11 1111 0 1223678899999988
Q ss_pred EEEc
Q psy7433 71 ISAG 74 (213)
Q Consensus 71 ~~~~ 74 (213)
+...
T Consensus 116 a~~~ 119 (353)
T PF00930_consen 116 AFLR 119 (353)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7653
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: |
| >PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.064 Score=39.76 Aligned_cols=137 Identities=12% Similarity=0.184 Sum_probs=72.4
Q ss_pred ecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------
Q psy7433 54 HDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----------- 122 (213)
Q Consensus 54 ~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------- 122 (213)
....+..+.-+++|++++++.....+.-||--...-...-......+..|.|.|++...+++ ..+.+.
T Consensus 143 ~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~~~~~w 221 (302)
T PF14870_consen 143 TSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSDDPDDGETW 221 (302)
T ss_dssp ----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-TTEEEEE
T ss_pred CcceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEEe-CCcEEEEccCCCCcccc
Confidence 34668888889999988888765555677754321111122356789999999998765544 555554
Q ss_pred -----------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEE
Q psy7433 123 -----------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSC 191 (213)
Q Consensus 123 -----------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~ 191 (213)
..+..++|.+++...++|+. |.+ +.....++.-...+..... ..-.+.+.|.+++.-...
T Consensus 222 ~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg~-G~l-~~S~DgGktW~~~~~~~~~-------~~n~~~i~f~~~~~gf~l 292 (302)
T PF14870_consen 222 SEPIIPIKTNGYGILDLAYRPPNEIWAVGGS-GTL-LVSTDGGKTWQKDRVGENV-------PSNLYRIVFVNPDKGFVL 292 (302)
T ss_dssp ---B-TTSS--S-EEEEEESSSS-EEEEEST-T-E-EEESSTTSS-EE-GGGTTS-------SS---EEEEEETTEEEEE
T ss_pred ccccCCcccCceeeEEEEecCCCCEEEEeCC-ccE-EEeCCCCccceECccccCC-------CCceEEEEEcCCCceEEE
Confidence 45788999998887776654 444 3334444433333221100 145788888766676666
Q ss_pred ecCCcEEEE
Q psy7433 192 GADGSMKVR 200 (213)
Q Consensus 192 ~~d~~i~iw 200 (213)
+.+|.+--|
T Consensus 293 G~~G~ll~~ 301 (302)
T PF14870_consen 293 GQDGVLLRY 301 (302)
T ss_dssp -STTEEEEE
T ss_pred CCCcEEEEe
Confidence 788876544
|
|
| >KOG2444|consensus | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0017 Score=44.99 Aligned_cols=64 Identities=19% Similarity=0.188 Sum_probs=41.2
Q ss_pred CceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEE--ecCCcEEEEeCCCC
Q psy7433 134 EEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSC--GADGSMKVRQLPDR 205 (213)
Q Consensus 134 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~--~~d~~i~iw~~~~~ 205 (213)
+.+..++..+|.|+.|+++..+.+.....|... .....+....+..++.. |.|..++.|++...
T Consensus 114 ~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~--------~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~~ 179 (238)
T KOG2444|consen 114 SSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFE--------SGEELIVVGSDEFLKIADTSHDRVLKKWNVEKI 179 (238)
T ss_pred cceeEEeccCCceeeeccccCceeeeeccccCC--------CcceeEEecCCceEEeeccccchhhhhcchhhh
Confidence 457888999999999999877776666555421 12222333334555555 77777777777643
|
|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.024 Score=47.03 Aligned_cols=91 Identities=20% Similarity=0.423 Sum_probs=58.7
Q ss_pred CceEEEEecCCCEEEEEcCCCcEEEEecc-CceEEEecccCCCCeeEEEecCCCCEEEEecCCCceeeceEEEEEccC--
Q psy7433 57 GASSLVFAPQHQLLISAGKKGDICVIDLR-QRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPH-- 133 (213)
Q Consensus 57 ~v~~~~~~~~~~~l~~~~~d~~v~iwd~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~-- 133 (213)
.|..+..+|+|.+++..|..|.. |-.+. ....-..+.+....+.|-.+.=+..++ .... ...|..+.|+|.
T Consensus 86 ~v~~i~~n~~g~~lal~G~~~v~-V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~-~~~~----~~~i~qv~WhP~s~ 159 (717)
T PF10168_consen 86 EVHQISLNPTGSLLALVGPRGVV-VLELPRRWGKNGEFEDGKKEINCRTVPVDERFF-TSNS----SLEIKQVRWHPWSE 159 (717)
T ss_pred eEEEEEECCCCCEEEEEcCCcEE-EEEeccccCccccccCCCcceeEEEEEechhhc-cCCC----CceEEEEEEcCCCC
Confidence 57888999999999988876544 44443 222223344444455554443333333 2111 246788999996
Q ss_pred -CceEEEecCCCcEEEEEccC
Q psy7433 134 -EEFFVTGAGDGDIKVWSLSG 153 (213)
Q Consensus 134 -~~~l~~~~~dg~i~v~d~~~ 153 (213)
+..|++=+.|+++++||+..
T Consensus 160 ~~~~l~vLtsdn~lR~y~~~~ 180 (717)
T PF10168_consen 160 SDSHLVVLTSDNTLRLYDISD 180 (717)
T ss_pred CCCeEEEEecCCEEEEEecCC
Confidence 46888888999999999964
|
It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells []. |
| >KOG1916|consensus | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.00098 Score=54.90 Aligned_cols=177 Identities=11% Similarity=0.145 Sum_probs=105.0
Q ss_pred cccccCceEEEEEeC-CCCeEEEeeccCCCccEEEEeCCCcccccce-----eeeeeecCCceEEEEec---CCCEEEEE
Q psy7433 3 YQCHNKITSDFVFLG-SCSLVATAGHSSESKNVCLWDSLLPQKKALV-----QAFVCHDQGASSLVFAP---QHQLLISA 73 (213)
Q Consensus 3 l~~h~~~v~~~~~~~-~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~-----~~~~~~~~~v~~~~~~~---~~~~l~~~ 73 (213)
++|..+.|-.+.|-. +-..++ - .-|.+.+||+.. -.++.. .........+.-+.|.| +.-++..+
T Consensus 128 ~kgf~G~v~dl~fah~~~pk~~-~----~vg~lfVy~vd~-l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~ 201 (1283)
T KOG1916|consen 128 AKGFPGGVGDLQFAHTKCPKGR-R----LVGELFVYDVDV-LQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYG 201 (1283)
T ss_pred HhcCCCCcccccccccCChHHH-H----HhhhhheeehHh-hccccccceEEeecCcCCCCcceeeecccccccceeeec
Confidence 345666777777743 111222 1 346788999843 122221 22222234455566655 66778888
Q ss_pred cCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCceeeceEEEEEccCCceEEEecCCCcEEEEEcc-
Q psy7433 74 GKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLS- 152 (213)
Q Consensus 74 ~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~- 152 (213)
-.++.+++....+... ..+..|...+..+++-..|-..+.+ ++|||+.++++..||.++.|.+.
T Consensus 202 ~~~~~i~lL~~~ra~~-~l~rsHs~~~~d~a~~~~g~~~l~~--------------lSpDGtv~a~a~~dG~v~f~Qiyi 266 (1283)
T KOG1916|consen 202 LKGGEIRLLNINRALR-SLFRSHSQRVTDMAFFAEGVLKLAS--------------LSPDGTVFAWAISDGSVGFYQIYI 266 (1283)
T ss_pred cCCCceeEeeechHHH-HHHHhcCCCcccHHHHhhchhhhee--------------eCCCCcEEEEeecCCccceeeeee
Confidence 8889988877654432 4456688888888888766443322 89999999999999998888763
Q ss_pred ----CCeeeeeecCCCCceeEEEecCCCeEEEEeCCC--------C--eEEEEe-cCCcEEEEeCCCCcccc
Q psy7433 153 ----GNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG--------S--RLFSCG-ADGSMKVRQLPDRDAVV 209 (213)
Q Consensus 153 ----~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--------~--~l~s~~-~d~~i~iw~~~~~~~~~ 209 (213)
...++..++.|.. .+-.|.-++.+ . .+++++ .+..+++|.-..-++++
T Consensus 267 ~g~~~~rclhewkphd~---------~p~vC~lc~~~~~~~v~i~~w~~~Itttd~nre~k~w~~a~w~Cll 329 (1283)
T KOG1916|consen 267 TGKIVHRCLHEWKPHDK---------HPRVCWLCHKQEILVVSIGKWVLRITTTDVNREEKFWAEAPWQCLL 329 (1283)
T ss_pred eccccHhhhhccCCCCC---------CCceeeeeccccccCCccceeEEEEecccCCcceeEeeccchhhhh
Confidence 3345555655542 22222223321 1 234444 45689999876655543
|
|
| >PHA02713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.091 Score=42.71 Aligned_cols=97 Identities=8% Similarity=0.055 Sum_probs=47.2
Q ss_pred CCCeEEEeeccCC---CccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCC-----cEEEEeccCceE
Q psy7433 18 SCSLVATAGHSSE---SKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKG-----DICVIDLRQRVI 89 (213)
Q Consensus 18 ~~~~l~~~g~~s~---~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~v~iwd~~~~~~ 89 (213)
++.+++.||.... -..+..||.... ....+..+.........+ .-++++.+.||.++ .+..||..+.+-
T Consensus 303 ~~~IYviGG~~~~~~~~~~v~~Yd~~~n-~W~~~~~m~~~R~~~~~~--~~~g~IYviGG~~~~~~~~sve~Ydp~~~~W 379 (557)
T PHA02713 303 DNEIIIAGGYNFNNPSLNKVYKINIENK-IHVELPPMIKNRCRFSLA--VIDDTIYAIGGQNGTNVERTIECYTMGDDKW 379 (557)
T ss_pred CCEEEEEcCCCCCCCccceEEEEECCCC-eEeeCCCCcchhhceeEE--EECCEEEEECCcCCCCCCceEEEEECCCCeE
Confidence 5667777763111 145778887432 222222222112222222 23677777787654 478899887643
Q ss_pred EE--ecccCCCCeeEEEecCCCCEEEEecCCC
Q psy7433 90 RS--RFNAHESPVKCLAIDPHEEFFVTGAGDG 119 (213)
Q Consensus 90 ~~--~~~~~~~~i~~~~~~~~~~~l~~~~~~~ 119 (213)
.. .++........+. -+++..+.|+.++
T Consensus 380 ~~~~~mp~~r~~~~~~~--~~g~IYviGG~~~ 409 (557)
T PHA02713 380 KMLPDMPIALSSYGMCV--LDQYIYIIGGRTE 409 (557)
T ss_pred EECCCCCcccccccEEE--ECCEEEEEeCCCc
Confidence 32 2221111111222 2577777777653
|
|
| >PF15390 DUF4613: Domain of unknown function (DUF4613) | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.15 Score=40.74 Aligned_cols=108 Identities=12% Similarity=0.254 Sum_probs=68.0
Q ss_pred ccCceEEEEEeCC----C-CeEEEeeccCCCccEEEEeCCC--cccccceeeeeeec-C----CceEEEEecCCCEEEEE
Q psy7433 6 HNKITSDFVFLGS----C-SLVATAGHSSESKNVCLWDSLL--PQKKALVQAFVCHD-Q----GASSLVFAPQHQLLISA 73 (213)
Q Consensus 6 h~~~v~~~~~~~~----~-~~l~~~g~~s~~~~i~iwd~~~--~~~~~~~~~~~~~~-~----~v~~~~~~~~~~~l~~~ 73 (213)
.-+.|..+.|.|- - .+||.- ....|.+|-+.. .+..+.+.....+- . --..+.|+|....|+.-
T Consensus 55 qFEhV~GlsW~P~~~~~~paLLAVQ----HkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VL 130 (671)
T PF15390_consen 55 QFEHVHGLSWAPPCTADTPALLAVQ----HKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVL 130 (671)
T ss_pred ccceeeeeeecCcccCCCCceEEEe----ccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEE
Confidence 3467899999994 2 356654 789999999841 12223222222111 1 12467899998887765
Q ss_pred cCCCcEEEEeccCc--eEEEecccCCCCeeEEEecCCCCEEEEecCC
Q psy7433 74 GKKGDICVIDLRQR--VIRSRFNAHESPVKCLAIDPHEEFFVTGAGD 118 (213)
Q Consensus 74 ~~d~~v~iwd~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~ 118 (213)
.....-.+++++.. +...-+ ...+.|.|.+|.+||+.|+++-..
T Consensus 131 T~~dvSV~~sV~~d~srVkaDi-~~~G~IhCACWT~DG~RLVVAvGS 176 (671)
T PF15390_consen 131 TARDVSVLPSVHCDSSRVKADI-KTSGLIHCACWTKDGQRLVVAVGS 176 (671)
T ss_pred ecCceeEeeeeeeCCceEEEec-cCCceEEEEEecCcCCEEEEEeCC
Confidence 55444456666543 333334 356789999999999988776544
|
|
| >PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.11 Score=39.28 Aligned_cols=107 Identities=16% Similarity=0.222 Sum_probs=58.2
Q ss_pred ceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeee----eeecCCceEEEEecC---CCEEEEEcCC-----
Q psy7433 9 ITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAF----VCHDQGASSLVFAPQ---HQLLISAGKK----- 76 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~----~~~~~~v~~~~~~~~---~~~l~~~~~d----- 76 (213)
..++|+|.|+|++|++- ..|.|++++.. ......+..+ .........++++|+ ..+|+.....
T Consensus 3 ~P~~~a~~pdG~l~v~e----~~G~i~~~~~~-g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~ 77 (331)
T PF07995_consen 3 NPRSMAFLPDGRLLVAE----RSGRIWVVDKD-GSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDG 77 (331)
T ss_dssp SEEEEEEETTSCEEEEE----TTTEEEEEETT-TEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSS
T ss_pred CceEEEEeCCCcEEEEe----CCceEEEEeCC-CcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCC
Confidence 46899999999999987 69999999932 1221222222 123456789999994 2344433221
Q ss_pred ----CcEEEEeccCc-------e-EEEeccc---CCCCeeEEEecCCCCEEEEecCCCc
Q psy7433 77 ----GDICVIDLRQR-------V-IRSRFNA---HESPVKCLAIDPHEEFFVTGAGDGD 120 (213)
Q Consensus 77 ----~~v~iwd~~~~-------~-~~~~~~~---~~~~i~~~~~~~~~~~l~~~~~~~~ 120 (213)
..|.-|....+ + .+..+.. .......|.|.|++.+.++.+..+.
T Consensus 78 ~~~~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~~~ 136 (331)
T PF07995_consen 78 GDNDNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDGGN 136 (331)
T ss_dssp SSEEEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-TTT
T ss_pred CCcceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCCCC
Confidence 13433444322 1 1112222 2334567999999977666655443
|
The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B .... |
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.039 Score=41.07 Aligned_cols=101 Identities=10% Similarity=0.047 Sum_probs=65.1
Q ss_pred ceEEEEEeCCCCeEEEeeccCCCccEEEEeCCC--cccccc--eeeeeeecCCceEEEEecCCCEEEEEcCCC-cEEEEe
Q psy7433 9 ITSDFVFLGSCSLVATAGHSSESKNVCLWDSLL--PQKKAL--VQAFVCHDQGASSLVFAPQHQLLISAGKKG-DICVID 83 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~--~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~v~iwd 83 (213)
.-+.|+||||++.|..+- +..+.|..|++.. ...... ........+..-.++...+|++.+++..+| .|..|+
T Consensus 164 ~~NGla~SpDg~tly~aD--T~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~ 241 (307)
T COG3386 164 IPNGLAFSPDGKTLYVAD--TPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFN 241 (307)
T ss_pred ecCceEECCCCCEEEEEe--CCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEEC
Confidence 456799999998888773 4567888887742 111111 111222345566778888888776555554 899999
Q ss_pred ccCceEEEecccCCCCeeEEEec-CCCCEE
Q psy7433 84 LRQRVIRSRFNAHESPVKCLAID-PHEEFF 112 (213)
Q Consensus 84 ~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l 112 (213)
.+ ++.+..+.-....+++++|- |+.+.|
T Consensus 242 pd-G~l~~~i~lP~~~~t~~~FgG~~~~~L 270 (307)
T COG3386 242 PD-GKLLGEIKLPVKRPTNPAFGGPDLNTL 270 (307)
T ss_pred CC-CcEEEEEECCCCCCccceEeCCCcCEE
Confidence 88 88888777655667777774 334433
|
|
| >cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.16 Score=40.62 Aligned_cols=63 Identities=6% Similarity=0.082 Sum_probs=39.5
Q ss_pred CCCccEEEEeCCCcccccceeeeeeecC------Cce--EEEEecCCCEEEEEcCCCcEEEEeccCceEEEeccc
Q psy7433 29 SESKNVCLWDSLLPQKKALVQAFVCHDQ------GAS--SLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNA 95 (213)
Q Consensus 29 s~~~~i~iwd~~~~~~~~~~~~~~~~~~------~v~--~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~ 95 (213)
+.++.|.-.|. .+++.+..+..... .+. .+... ++..++.++.++.|.-+|.++++.+-++..
T Consensus 68 ~~~g~l~AlD~---~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~-~~~~V~v~~~~g~v~AlD~~TG~~~W~~~~ 138 (488)
T cd00216 68 TSHSALFALDA---ATGKVLWRYDPKLPADRGCCDVVNRGVAYW-DPRKVFFGTFDGRLVALDAETGKQVWKFGN 138 (488)
T ss_pred CCCCcEEEEEC---CCChhhceeCCCCCccccccccccCCcEEc-cCCeEEEecCCCeEEEEECCCCCEeeeecC
Confidence 46889999998 45555544332211 000 01111 226788888899999999999988876653
|
The alignment model contains an 8-bladed beta-propeller. |
| >PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.17 Score=39.40 Aligned_cols=106 Identities=10% Similarity=0.090 Sum_probs=62.7
Q ss_pred eEEEEEeCCCCeEEEeec--cCCCccEEEEeCCCcccccceee-eeeecCCceEEEEecCCCEEEEEcCC----------
Q psy7433 10 TSDFVFLGSCSLVATAGH--SSESKNVCLWDSLLPQKKALVQA-FVCHDQGASSLVFAPQHQLLISAGKK---------- 76 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~--~s~~~~i~iwd~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d---------- 76 (213)
+..+.++|+|+++|.+-. ++....++++|++ +++.+.. +.. .....+.|.++++.|+....+
T Consensus 126 ~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~---tg~~l~d~i~~--~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~ 200 (414)
T PF02897_consen 126 LGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLE---TGKFLPDGIEN--PKFSSVSWSDDGKGFFYTRFDEDQRTSDSGY 200 (414)
T ss_dssp EEEEEETTTSSEEEEEEEETTSSEEEEEEEETT---TTEEEEEEEEE--EESEEEEECTTSSEEEEEECSTTTSS-CCGC
T ss_pred eeeeeECCCCCEEEEEecCCCCceEEEEEEECC---CCcCcCCcccc--cccceEEEeCCCCEEEEEEeCcccccccCCC
Confidence 446789999999886521 1344569999994 4444332 221 122349999998877655432
Q ss_pred -CcEEEEeccCceE--EEecccCCCC--eeEEEecCCCCEEEEecCCCc
Q psy7433 77 -GDICVIDLRQRVI--RSRFNAHESP--VKCLAIDPHEEFFVTGAGDGD 120 (213)
Q Consensus 77 -~~v~iwd~~~~~~--~~~~~~~~~~--i~~~~~~~~~~~l~~~~~~~~ 120 (213)
..|..|++.+... ...+...... ...+..++++++++.....+.
T Consensus 201 ~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~ 249 (414)
T PF02897_consen 201 PRQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGT 249 (414)
T ss_dssp CEEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSS
T ss_pred CcEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccc
Confidence 2377777766521 2333333332 567888999998776554443
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A .... |
| >COG3391 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.18 Score=38.97 Aligned_cols=150 Identities=12% Similarity=0.163 Sum_probs=99.3
Q ss_pred ceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEc-CCCcEEEEeccCc
Q psy7433 9 ITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG-KKGDICVIDLRQR 87 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~iwd~~~~ 87 (213)
....++++|++..+..+.....++++.+.|. .+.+.+.....-..+ ..++++|+++.++... .++.|.+.|....
T Consensus 117 ~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~---~t~~~~~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~ 192 (381)
T COG3391 117 GPVGLAVDPDGKYVYVANAGNGNNTVSVIDA---ATNKVTATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGN 192 (381)
T ss_pred CCceEEECCCCCEEEEEecccCCceEEEEeC---CCCeEEEEEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCc
Confidence 4557889999987777742113678888886 455555554333334 8899999999776665 6889999997766
Q ss_pred eEEE-e---cccCCCCeeEEEecCCCCEEEEecCCC---cee-----------------e-ceEEEEEccCCceEEEec-
Q psy7433 88 VIRS-R---FNAHESPVKCLAIDPHEEFFVTGAGDG---DIK-----------------S-PVKCLAIDPHEEFFVTGA- 141 (213)
Q Consensus 88 ~~~~-~---~~~~~~~i~~~~~~~~~~~l~~~~~~~---~i~-----------------~-~v~~~~~~~~~~~l~~~~- 141 (213)
...+ . ..........+.++|++..+.+..... .+. . ....+..+|+|+.+.+..
T Consensus 193 ~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~v~~~p~g~~~yv~~~ 272 (381)
T COG3391 193 SVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTATDLPVGSGAPRGVAVDPAGKAAYVANS 272 (381)
T ss_pred ceeccccccccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEeccccccCCCCceeECCCCCEEEEEec
Confidence 5543 1 011223446788999998665554443 332 1 234578999999877774
Q ss_pred CCCcEEEEEccCCeeeeeecC
Q psy7433 142 GDGDIKVWSLSGNHLLYNFPG 162 (213)
Q Consensus 142 ~dg~i~v~d~~~~~~~~~~~~ 162 (213)
..+.+.+-|..+.........
T Consensus 273 ~~~~V~vid~~~~~v~~~~~~ 293 (381)
T COG3391 273 QGGTVSVIDGATDRVVKTGPT 293 (381)
T ss_pred CCCeEEEEeCCCCceeeeecc
Confidence 448899999887766665444
|
|
| >PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2 | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.14 Score=37.05 Aligned_cols=173 Identities=12% Similarity=0.051 Sum_probs=96.2
Q ss_pred eEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCC-ceEEEEecCCCEEEEEcCCCcEEEEeccCce
Q psy7433 10 TSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQG-ASSLVFAPQHQLLISAGKKGDICVIDLRQRV 88 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~ 88 (213)
...+.|..+|.++-++|. -....|+.+|+ .+++......-.... --.+... +.++..-.=.++...+||..+.+
T Consensus 47 TQGL~~~~~g~LyESTG~-yG~S~l~~~d~---~tg~~~~~~~l~~~~FgEGit~~-~d~l~qLTWk~~~~f~yd~~tl~ 121 (264)
T PF05096_consen 47 TQGLEFLDDGTLYESTGL-YGQSSLRKVDL---ETGKVLQSVPLPPRYFGEGITIL-GDKLYQLTWKEGTGFVYDPNTLK 121 (264)
T ss_dssp EEEEEEEETTEEEEEECS-TTEEEEEEEET---TTSSEEEEEE-TTT--EEEEEEE-TTEEEEEESSSSEEEEEETTTTE
T ss_pred CccEEecCCCEEEEeCCC-CCcEEEEEEEC---CCCcEEEEEECCccccceeEEEE-CCEEEEEEecCCeEEEEccccce
Confidence 456777778888888864 33458999998 455554443322111 1122332 22333334467899999999998
Q ss_pred EEEecccCCCCeeEEEecCCCCEEEEecCCCcee----------------------eceEEEEEccCCceEEEecCCCcE
Q psy7433 89 IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----------------------SPVKCLAIDPHEEFFVTGAGDGDI 146 (213)
Q Consensus 89 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------------~~v~~~~~~~~~~~l~~~~~dg~i 146 (213)
.+.+++ ....-+.++ .+++.|+.......+. ..++-+.|- +|...|-.=....|
T Consensus 122 ~~~~~~-y~~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i-~G~IyANVW~td~I 197 (264)
T PF05096_consen 122 KIGTFP-YPGEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYI-NGKIYANVWQTDRI 197 (264)
T ss_dssp EEEEEE--SSS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEE-TTEEEEEETTSSEE
T ss_pred EEEEEe-cCCcceEEE--cCCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEE-cCEEEEEeCCCCeE
Confidence 888876 345667777 3455566555554443 344555554 56666666666778
Q ss_pred EEEEccCCeeeeeecCCCCce-----eEEEecCCCeEEEEeCCC-Ce-EEEE
Q psy7433 147 KVWSLSGNHLLYNFPGEHARS-----SFFKHIGQGVTQLHVDGG-SR-LFSC 191 (213)
Q Consensus 147 ~v~d~~~~~~~~~~~~~~~~~-----~~~~~~~~~v~~~~~~~~-~~-l~s~ 191 (213)
...|..+|+....+....... ..........+.++++|. ++ ++||
T Consensus 198 ~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTG 249 (264)
T PF05096_consen 198 VRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTG 249 (264)
T ss_dssp EEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEE
T ss_pred EEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEe
Confidence 888888888776553311000 000111257899999873 44 5555
|
3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X. |
| >PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.01 Score=29.67 Aligned_cols=32 Identities=25% Similarity=0.456 Sum_probs=26.4
Q ss_pred CCceEEEEecC-C--CEEEEEcCCCcEEEEeccCc
Q psy7433 56 QGASSLVFAPQ-H--QLLISAGKKGDICVIDLRQR 87 (213)
Q Consensus 56 ~~v~~~~~~~~-~--~~l~~~~~d~~v~iwd~~~~ 87 (213)
+.+++++|+|+ + .+|+..-..|.|.++|++++
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~~ 35 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRSN 35 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEcccC
Confidence 35889999984 4 58888888899999999953
|
It contains a characteristic DLL sequence motif. |
| >PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.14 Score=37.07 Aligned_cols=131 Identities=11% Similarity=0.111 Sum_probs=81.3
Q ss_pred ceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEe-ccCc
Q psy7433 9 ITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVID-LRQR 87 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd-~~~~ 87 (213)
.+.+.+++++++.+|..........+.++.. .......+ ....+....|++++...+....+....++. ..++
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~----~~~~~~~~--~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g 98 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPA----GGPVRPVL--TGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASG 98 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcC----CCcceeec--cCCccccccccCCCCEEEEEcCCCceEEEEecCCC
Confidence 6888999999998887621012334444443 11111111 233678889999988777776666666664 2333
Q ss_pred eE-EEeccc--CCCCeeEEEecCCCCEEEEecC---CCcee--------------------------eceEEEEEccCCc
Q psy7433 88 VI-RSRFNA--HESPVKCLAIDPHEEFFVTGAG---DGDIK--------------------------SPVKCLAIDPHEE 135 (213)
Q Consensus 88 ~~-~~~~~~--~~~~i~~~~~~~~~~~l~~~~~---~~~i~--------------------------~~v~~~~~~~~~~ 135 (213)
.. ...... ....|..++++|||..++.... ++.+. ..+..+.|.+++.
T Consensus 99 ~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~ 178 (253)
T PF10647_consen 99 TGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDST 178 (253)
T ss_pred cceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCCE
Confidence 21 112221 1228999999999998776652 23332 5778999999998
Q ss_pred eEEEecCCCc
Q psy7433 136 FFVTGAGDGD 145 (213)
Q Consensus 136 ~l~~~~~dg~ 145 (213)
+++.+...+.
T Consensus 179 L~V~~~~~~~ 188 (253)
T PF10647_consen 179 LVVLGRSAGG 188 (253)
T ss_pred EEEEeCCCCC
Confidence 7776655443
|
It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues. |
| >PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.12 Score=42.14 Aligned_cols=94 Identities=11% Similarity=0.170 Sum_probs=61.7
Q ss_pred CCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecc-cCCCCeeEEEec--CCCCEEEEecCCCcee----------
Q psy7433 56 QGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFN-AHESPVKCLAID--PHEEFFVTGAGDGDIK---------- 122 (213)
Q Consensus 56 ~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~-~~~~~i~~~~~~--~~~~~l~~~~~~~~i~---------- 122 (213)
....-+.-+.-++..++-+....+.|||.+.+.....-. ...+.|..+.|. |++..+++.+....+.
T Consensus 30 ~~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~ 109 (631)
T PF12234_consen 30 SNPSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYT 109 (631)
T ss_pred CCcceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhh
Confidence 344445555545444444455689999999886443322 357789999986 4777777766666553
Q ss_pred -------------------eceEEEEEccCCceEEEecCCCcEEEEEc
Q psy7433 123 -------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSL 151 (213)
Q Consensus 123 -------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~ 151 (213)
.+|.+..|.++|.+++.++ +.+.|+|-
T Consensus 110 ~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~sG--Nqlfv~dk 155 (631)
T PF12234_consen 110 NKGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGSG--NQLFVFDK 155 (631)
T ss_pred cCCcccceeEEEEeecCCCCCccceeEecCCeEEEEeC--CEEEEECC
Confidence 6778888998887555443 46778764
|
This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits. |
| >KOG4441|consensus | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.35 Score=39.48 Aligned_cols=175 Identities=15% Similarity=0.184 Sum_probs=87.9
Q ss_pred CCCeEEEeeccC---CCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCC------CcEEEEeccCce
Q psy7433 18 SCSLVATAGHSS---ESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKK------GDICVIDLRQRV 88 (213)
Q Consensus 18 ~~~~l~~~g~~s---~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~v~iwd~~~~~ 88 (213)
.+.+++.||... .-..+..+|.... .......+..... -.+++.. ++...++|+.| ..+..||.++.+
T Consensus 284 ~~~l~~vGG~~~~~~~~~~ve~yd~~~~-~w~~~a~m~~~r~-~~~~~~~-~~~lYv~GG~~~~~~~l~~ve~YD~~~~~ 360 (571)
T KOG4441|consen 284 SGKLVAVGGYNRQGQSLRSVECYDPKTN-EWSSLAPMPSPRC-RVGVAVL-NGKLYVVGGYDSGSDRLSSVERYDPRTNQ 360 (571)
T ss_pred CCeEEEECCCCCCCcccceeEEecCCcC-cEeecCCCCcccc-cccEEEE-CCEEEEEccccCCCcccceEEEecCCCCc
Confidence 466777886411 1256788887432 2223333332222 2333333 55778888888 357788887765
Q ss_pred EEEecccCCCCeeEEEec-CCCCEEEEecCCCcee---------------------eceEEEE-EccCCceEEEecCCC-
Q psy7433 89 IRSRFNAHESPVKCLAID-PHEEFFVTGAGDGDIK---------------------SPVKCLA-IDPHEEFFVTGAGDG- 144 (213)
Q Consensus 89 ~~~~~~~~~~~i~~~~~~-~~~~~l~~~~~~~~i~---------------------~~v~~~~-~~~~~~~l~~~~~dg- 144 (213)
-.. +.....+-..+... -+|...++|+.||.-. ....... -.-+|++.++|+.++
T Consensus 361 W~~-~a~M~~~R~~~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~~~r~~~gv~~~~g~iYi~GG~~~~ 439 (571)
T KOG4441|consen 361 WTP-VAPMNTKRSDFGVAVLDGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPMLTRRSGHGVAVLGGKLYIIGGGDGS 439 (571)
T ss_pred eec-cCCccCccccceeEEECCEEEEEeccccccccccEEEecCCCCcccccCCCCcceeeeEEEEECCEEEEEcCcCCC
Confidence 433 22111111111111 2578899999987553 0111111 112467777777554
Q ss_pred -----cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCc-----EEEEeCCCC
Q psy7433 145 -----DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGS-----MKVRQLPDR 205 (213)
Q Consensus 145 -----~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~-----i~iw~~~~~ 205 (213)
.+..||..+..-...-+....+ .-..++.-.+..++.||.|+. |..||..+.
T Consensus 440 ~~~l~sve~YDP~t~~W~~~~~M~~~R---------~~~g~a~~~~~iYvvGG~~~~~~~~~VE~ydp~~~ 501 (571)
T KOG4441|consen 440 SNCLNSVECYDPETNTWTLIAPMNTRR---------SGFGVAVLNGKIYVVGGFDGTSALSSVERYDPETN 501 (571)
T ss_pred ccccceEEEEcCCCCceeecCCccccc---------ccceEEEECCEEEEECCccCCCccceEEEEcCCCC
Confidence 4667777665443332222211 122244444555677776652 555665543
|
|
| >cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.32 Score=38.96 Aligned_cols=64 Identities=19% Similarity=0.291 Sum_probs=38.5
Q ss_pred CCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCe--EEEEeCCCCeEEEEecCCcEEEEeCCCCccc
Q psy7433 142 GDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGV--TQLHVDGGSRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 142 ~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
.+|.+.-.|+++++.+-+......... ...+.+. ..+.. .++.++.++.||.++.+|..+++.+
T Consensus 364 ~~G~l~AlD~~tG~~~W~~~~~~~~~~--~~~g~~~~~~~~~~-~g~~v~~g~~dG~l~ald~~tG~~l 429 (488)
T cd00216 364 GKGGLAALDPKTGKVVWEKREGTIRDS--WNIGFPHWGGSLAT-AGNLVFAGAADGYFRAFDATTGKEL 429 (488)
T ss_pred CceEEEEEeCCCCcEeeEeeCCccccc--cccCCcccCcceEe-cCCeEEEECCCCeEEEEECCCCcee
Confidence 457888889998887766654310000 0000011 11222 2467888889999999999988654
|
The alignment model contains an 8-bladed beta-propeller. |
| >KOG2444|consensus | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.021 Score=39.86 Aligned_cols=105 Identities=11% Similarity=0.168 Sum_probs=61.4
Q ss_pred CeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEE-EEecCCCEEEEEcCCCcEEEEeccCceEEEecccCCC
Q psy7433 20 SLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSL-VFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHES 98 (213)
Q Consensus 20 ~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~ 98 (213)
..++.+ ..+|.|.+|..+ ..+.....+..-...+.++ .--.++.+..++..||.|+.|++.-.+.+.....|..
T Consensus 71 ~~~~vG---~~dg~v~~~n~n--~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~ 145 (238)
T KOG2444|consen 71 AKLMVG---TSDGAVYVFNWN--LEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNF 145 (238)
T ss_pred ceEEee---cccceEEEecCC--ccchHHHhhhcccccceeccccccccceeEEeccCCceeeeccccCceeeeeccccC
Confidence 445565 689999999984 2222222222222222222 2223556888999999999999987776655544442
Q ss_pred CeeEEEecCCCCEEEEecCCCceeeceEEEEEccCCceEEEe--cCCCcEEEEEccC
Q psy7433 99 PVKCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPHEEFFVTG--AGDGDIKVWSLSG 153 (213)
Q Consensus 99 ~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~~~~l~~~--~~dg~i~v~d~~~ 153 (213)
-| +..+++.+ .++.++.+ |.|..++.|++..
T Consensus 146 -------~~-~e~~ivv~----------------sd~~i~~a~~S~d~~~k~W~ve~ 178 (238)
T KOG2444|consen 146 -------ES-GEELIVVG----------------SDEFLKIADTSHDRVLKKWNVEK 178 (238)
T ss_pred -------CC-cceeEEec----------------CCceEEeeccccchhhhhcchhh
Confidence 22 22222222 13556666 7788888898864
|
|
| >KOG4460|consensus | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.094 Score=41.36 Aligned_cols=101 Identities=25% Similarity=0.303 Sum_probs=65.9
Q ss_pred CceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCceeeceEEEEEccCC--
Q psy7433 57 GASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPHE-- 134 (213)
Q Consensus 57 ~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~~-- 134 (213)
.|..+..++.|..++-.+.+|.+.++=.+....-..+......|+|-.+.-+ ..|.+.+.. -.+..++|+|+.
T Consensus 105 eV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~-~~~ftss~~----ltl~Qa~WHP~S~~ 179 (741)
T KOG4460|consen 105 EVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVA-ERFFTSSTS----LTLKQAAWHPSSIL 179 (741)
T ss_pred EEEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeeccc-ceeeccCCc----eeeeeccccCCccC
Confidence 4566777889998888888888776654444334445544455666555443 344443322 345678899975
Q ss_pred -ceEEEecCCCcEEEEEccCCeeeeeecC
Q psy7433 135 -EFFVTGAGDGDIKVWSLSGNHLLYNFPG 162 (213)
Q Consensus 135 -~~l~~~~~dg~i~v~d~~~~~~~~~~~~ 162 (213)
..|..-+.|+.|++||+.....+....+
T Consensus 180 D~hL~iL~sdnviRiy~lS~~telylqpg 208 (741)
T KOG4460|consen 180 DPHLVLLTSDNVIRIYSLSEPTELYLQPG 208 (741)
T ss_pred CceEEEEecCcEEEEEecCCcchhhccCC
Confidence 4677778899999999976665544433
|
|
| >KOG3630|consensus | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.16 Score=43.74 Aligned_cols=122 Identities=9% Similarity=0.021 Sum_probs=76.6
Q ss_pred CceEEEEecCCCEEEEE--cCCCcEEEEeccCceE-----EEecc------cCCCCeeEEEecCCCC-EEEEecCCCcee
Q psy7433 57 GASSLVFAPQHQLLISA--GKKGDICVIDLRQRVI-----RSRFN------AHESPVKCLAIDPHEE-FFVTGAGDGDIK 122 (213)
Q Consensus 57 ~v~~~~~~~~~~~l~~~--~~d~~v~iwd~~~~~~-----~~~~~------~~~~~i~~~~~~~~~~-~l~~~~~~~~i~ 122 (213)
++..+..++|+...+.. +.+-.|..||+++... ...+. .......++.|+|.-. ..+++..|+.+.
T Consensus 102 pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~ 181 (1405)
T KOG3630|consen 102 PIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLR 181 (1405)
T ss_pred cceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchh
Confidence 45556666776554433 3344788999976421 11111 1233456888888533 456666777665
Q ss_pred -----------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCC
Q psy7433 123 -----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG 185 (213)
Q Consensus 123 -----------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 185 (213)
...++++|+|.|+.++.|-..|++.-|... .+....+....... ...|.++.|-..
T Consensus 182 V~~~~~~~~~v~s~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~-leik~~ip~Pp~~e------~yrvl~v~Wl~t 254 (1405)
T KOG3630|consen 182 VKSTKQLAQNVTSFPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPS-LEIKSEIPEPPVEE------NYRVLSVTWLST 254 (1405)
T ss_pred hhhhhhhhhhhcccCcccceeeEEeccccceeeEecCCCeEEEeecc-cceeecccCCCcCC------CcceeEEEEecc
Confidence 678999999999999999999999888653 33333333322111 157899999753
|
|
| >PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.058 Score=41.78 Aligned_cols=84 Identities=19% Similarity=0.186 Sum_probs=59.5
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec---C-C-----------
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP---Q-H----------- 67 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~---~-~----------- 67 (213)
|......+.++..+|++++.|++ +.-|.|.++|+ .....++.+++..+.- +.|.. . .
T Consensus 303 l~D~~R~~~~i~~sP~~~laA~t---DslGRV~LiD~---~~~~vvrmWKGYRdAq--c~wi~~~~~~~~~~~~~~~~~~ 374 (415)
T PF14655_consen 303 LPDSKREGESICLSPSGRLAAVT---DSLGRVLLIDV---ARGIVVRMWKGYRDAQ--CGWIEVPEEGDRDRSNSNSPKS 374 (415)
T ss_pred eccCCceEEEEEECCCCCEEEEE---cCCCcEEEEEC---CCChhhhhhccCccce--EEEEEeecccccccccccccCC
Confidence 45567789999999999999998 78899999999 5666677666654421 22211 1 0
Q ss_pred ----C--EEEEEcCCCcEEEEeccCceEEEecc
Q psy7433 68 ----Q--LLISAGKKGDICVIDLRQRVIRSRFN 94 (213)
Q Consensus 68 ----~--~l~~~~~d~~v~iwd~~~~~~~~~~~ 94 (213)
. +++-+-.-|.|-+|.++++..+..+.
T Consensus 375 ~~~~~l~LvIyaprRg~lEvW~~~~g~Rv~a~~ 407 (415)
T PF14655_consen 375 SSRFALFLVIYAPRRGILEVWSMRQGPRVAAFN 407 (415)
T ss_pred CCcceEEEEEEeccCCeEEEEecCCCCEEEEEE
Confidence 0 23455678899999999887776654
|
|
| >PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.21 Score=36.16 Aligned_cols=130 Identities=14% Similarity=0.159 Sum_probs=72.6
Q ss_pred CceEEEEecCCCEEEEEc---CCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------
Q psy7433 57 GASSLVFAPQHQLLISAG---KKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----------- 122 (213)
Q Consensus 57 ~v~~~~~~~~~~~l~~~~---~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------- 122 (213)
.+.+.+++++++.++... ....+.++.... ...... ....+..-+|++++...+....+....
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~--~~~~~~-~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~ 101 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGG--PVRPVL-TGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGE 101 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcCCC--cceeec-cCCccccccccCCCCEEEEEcCCCceEEEEecCCCcce
Confidence 688999999998777655 334455554332 222221 223566677777765544433322211
Q ss_pred ---------e-ceEEEEEccCCceEEEec---CCCcEEEEEcc-CCee-eeeecCCCCceeEEEecCCCeEEEEeCCCCe
Q psy7433 123 ---------S-PVKCLAIDPHEEFFVTGA---GDGDIKVWSLS-GNHL-LYNFPGEHARSSFFKHIGQGVTQLHVDGGSR 187 (213)
Q Consensus 123 ---------~-~v~~~~~~~~~~~l~~~~---~dg~i~v~d~~-~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 187 (213)
. .|..+.+||||..++... .++.|.+--+. ...- ...+.... .........++.+.|.++..
T Consensus 102 ~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~---~~~~~~~~~v~~v~W~~~~~ 178 (253)
T PF10647_consen 102 PVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPR---RVAPPLLSDVTDVAWSDDST 178 (253)
T ss_pred eEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccce---EecccccCcceeeeecCCCE
Confidence 2 799999999999766554 35677776552 1111 11111100 00001125799999998876
Q ss_pred EEEEe
Q psy7433 188 LFSCG 192 (213)
Q Consensus 188 l~s~~ 192 (213)
|+...
T Consensus 179 L~V~~ 183 (253)
T PF10647_consen 179 LVVLG 183 (253)
T ss_pred EEEEe
Confidence 54443
|
It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues. |
| >PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.021 Score=28.64 Aligned_cols=30 Identities=13% Similarity=0.426 Sum_probs=24.6
Q ss_pred ceEEEEEccCC---ceEEEecCCCcEEEEEccC
Q psy7433 124 PVKCLAIDPHE---EFFVTGAGDGDIKVWSLSG 153 (213)
Q Consensus 124 ~v~~~~~~~~~---~~l~~~~~dg~i~v~d~~~ 153 (213)
.+.++.|+|+. .+|+.+-..|.|.++|+|+
T Consensus 2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 57889999754 4888887889999999985
|
It contains a characteristic DLL sequence motif. |
| >TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.3 Score=37.51 Aligned_cols=106 Identities=12% Similarity=0.089 Sum_probs=58.0
Q ss_pred CceEEEEEeCCCCeEEEeecc--------CCCc-cEEEEeCCCccccc--ceeeeeeecCCceEEEEecCCCEEEEEcCC
Q psy7433 8 KITSDFVFLGSCSLVATAGHS--------SESK-NVCLWDSLLPQKKA--LVQAFVCHDQGASSLVFAPQHQLLISAGKK 76 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~--------s~~~-~i~iwd~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 76 (213)
.....|+|.++|+++++.... ...+ .|.+++-.+ ..++ ....+.........+++.+++ |+.+...
T Consensus 14 ~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~d-gdG~~d~~~vfa~~l~~p~Gi~~~~~G--lyV~~~~ 90 (367)
T TIGR02604 14 RNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDAD-GDGKYDKSNVFAEELSMVTGLAVAVGG--VYVATPP 90 (367)
T ss_pred CCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCC-CCCCcceeEEeecCCCCccceeEecCC--EEEeCCC
Confidence 457789999999998875100 0122 677776422 1222 223333333456889999888 4444444
Q ss_pred CcEEEEeccCc-----e--E-EEecccC----CCCeeEEEecCCCCEEEEec
Q psy7433 77 GDICVIDLRQR-----V--I-RSRFNAH----ESPVKCLAIDPHEEFFVTGA 116 (213)
Q Consensus 77 ~~v~iwd~~~~-----~--~-~~~~~~~----~~~i~~~~~~~~~~~l~~~~ 116 (213)
...++.|.... + . +..+... ......+++.|++.+.++.+
T Consensus 91 ~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G 142 (367)
T TIGR02604 91 DILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHG 142 (367)
T ss_pred eEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecc
Confidence 33334454321 1 1 1223221 23467899999998766554
|
All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs. |
| >KOG2395|consensus | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.04 Score=43.26 Aligned_cols=88 Identities=13% Similarity=0.173 Sum_probs=61.2
Q ss_pred CCccEEEEeCCCcccccceeeeeee----cCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEe
Q psy7433 30 ESKNVCLWDSLLPQKKALVQAFVCH----DQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAI 105 (213)
Q Consensus 30 ~~~~i~iwd~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~ 105 (213)
.+..|+-||.+..... .+...+.| .....|.+-..+| ++++|+.+|-|++||-...+....+++...+|..+..
T Consensus 402 s~n~vfriDpRv~~~~-kl~~~q~kqy~~k~nFsc~aTT~sG-~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I~hVdv 479 (644)
T KOG2395|consen 402 SDNSVFRIDPRVQGKN-KLAVVQSKQYSTKNNFSCFATTESG-YIVVGSLKGDIRLYDRIGRRAKTALPGLGDAIKHVDV 479 (644)
T ss_pred cCCceEEecccccCcc-eeeeeeccccccccccceeeecCCc-eEEEeecCCcEEeehhhhhhhhhcccccCCceeeEEe
Confidence 6889999998632221 22222322 2345555554455 8999999999999997444555667888899999999
Q ss_pred cCCCCEEEEecCCC
Q psy7433 106 DPHEEFFVTGAGDG 119 (213)
Q Consensus 106 ~~~~~~l~~~~~~~ 119 (213)
+.+|++++..+..-
T Consensus 480 tadGKwil~Tc~ty 493 (644)
T KOG2395|consen 480 TADGKWILATCKTY 493 (644)
T ss_pred eccCcEEEEecccE
Confidence 99999877666543
|
|
| >PF15390 DUF4613: Domain of unknown function (DUF4613) | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.39 Score=38.63 Aligned_cols=133 Identities=10% Similarity=0.119 Sum_probs=75.2
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecC----CCEEEEEcCCCcEEEEe
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQ----HQLLISAGKKGDICVID 83 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~l~~~~~d~~v~iwd 83 (213)
.+|..++|. ||+.++-..---.+|.+++=| ...+. .-+.|..+.|.|- ...|++.-....|.+|.
T Consensus 20 HPvhGlaWT-DGkqVvLT~L~l~~gE~kfGd------s~viG----qFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWq 88 (671)
T PF15390_consen 20 HPVHGLAWT-DGKQVVLTDLQLHNGEPKFGD------SKVIG----QFEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQ 88 (671)
T ss_pred ccccceEec-CCCEEEEEeeeeeCCccccCC------ccEee----ccceeeeeeecCcccCCCCceEEEeccceEEEEE
Confidence 467778885 566555441001223332222 12233 3456899999984 33455556678999998
Q ss_pred ccC-----ceEEEeccc-C--CC--CeeEEEecCCCCEEEEecCCC-cee-----------------eceEEEEEccCCc
Q psy7433 84 LRQ-----RVIRSRFNA-H--ES--PVKCLAIDPHEEFFVTGAGDG-DIK-----------------SPVKCLAIDPHEE 135 (213)
Q Consensus 84 ~~~-----~~~~~~~~~-~--~~--~i~~~~~~~~~~~l~~~~~~~-~i~-----------------~~v~~~~~~~~~~ 135 (213)
+.. ++.+..... . .- -...+.|+|....|++-.... .+. +.|.|.+|.+||+
T Consensus 89 L~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV~~sV~~d~srVkaDi~~~G~IhCACWT~DG~ 168 (671)
T PF15390_consen 89 LCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSVLPSVHCDSSRVKADIKTSGLIHCACWTKDGQ 168 (671)
T ss_pred eccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeEeeeeeeCCceEEEeccCCceEEEEEecCcCC
Confidence 852 222221111 1 11 124567888877766544332 221 7899999999999
Q ss_pred eEEEec-CCCcEEEEEc
Q psy7433 136 FFVTGA-GDGDIKVWSL 151 (213)
Q Consensus 136 ~l~~~~-~dg~i~v~d~ 151 (213)
.|+++- ..=.-++||-
T Consensus 169 RLVVAvGSsLHSyiWd~ 185 (671)
T PF15390_consen 169 RLVVAVGSSLHSYIWDS 185 (671)
T ss_pred EEEEEeCCeEEEEEecC
Confidence 666553 3335678885
|
|
| >KOG4499|consensus | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.22 Score=35.27 Aligned_cols=141 Identities=10% Similarity=0.097 Sum_probs=83.0
Q ss_pred CceEEEEEeCCCCeEEEeecc------CCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEE-cCCCcEE
Q psy7433 8 KITSDFVFLGSCSLVATAGHS------SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISA-GKKGDIC 80 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~------s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~v~ 80 (213)
.+.++-..+|+|++++-.-.. ...|.++.|-. ...+..+...-.--+.++|+.+.+.+... +.+-.|.
T Consensus 109 nR~NDgkvdP~Gryy~GtMad~~~~le~~~g~Ly~~~~-----~h~v~~i~~~v~IsNgl~Wd~d~K~fY~iDsln~~V~ 183 (310)
T KOG4499|consen 109 NRLNDGKVDPDGRYYGGTMADFGDDLEPIGGELYSWLA-----GHQVELIWNCVGISNGLAWDSDAKKFYYIDSLNYEVD 183 (310)
T ss_pred cccccCccCCCCceeeeeeccccccccccccEEEEecc-----CCCceeeehhccCCccccccccCcEEEEEccCceEEe
Confidence 345556678899986644210 01244555543 12222222233445678999877776654 3455676
Q ss_pred EEe--ccCceE-----EEecccCCCCeeEEEecCCCCEEEEecCCCceeeceEEEEEccCCceEEEecCCCcEEEEEccC
Q psy7433 81 VID--LRQRVI-----RSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSG 153 (213)
Q Consensus 81 iwd--~~~~~~-----~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~ 153 (213)
-|| ..+|.. +..++.. .+- =..-||| |+...+|.+.++.-..++|..+|..+
T Consensus 184 a~dyd~~tG~~snr~~i~dlrk~-~~~--e~~~PDG------------------m~ID~eG~L~Va~~ng~~V~~~dp~t 242 (310)
T KOG4499|consen 184 AYDYDCPTGDLSNRKVIFDLRKS-QPF--ESLEPDG------------------MTIDTEGNLYVATFNGGTVQKVDPTT 242 (310)
T ss_pred eeecCCCcccccCcceeEEeccC-CCc--CCCCCCc------------------ceEccCCcEEEEEecCcEEEEECCCC
Confidence 677 555532 1111110 000 0112344 33345677777777788999999999
Q ss_pred CeeeeeecCCCCceeEEEecCCCeEEEEeCC
Q psy7433 154 NHLLYNFPGEHARSSFFKHIGQGVTQLHVDG 184 (213)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 184 (213)
++.+.++..+. ..|++++|-.
T Consensus 243 GK~L~eiklPt----------~qitsccFgG 263 (310)
T KOG4499|consen 243 GKILLEIKLPT----------PQITSCCFGG 263 (310)
T ss_pred CcEEEEEEcCC----------CceEEEEecC
Confidence 99999998875 6799999974
|
|
| >PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.039 Score=38.97 Aligned_cols=75 Identities=9% Similarity=0.069 Sum_probs=47.6
Q ss_pred EccCCceEEEecCCCcEEEEEccCCeeeeeecC-CCCce---eEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCC
Q psy7433 130 IDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPG-EHARS---SFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 130 ~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~-~~~~~---~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~ 204 (213)
+..+++++++-+.+|.+++||+++.+....-.. ..... .........|..+.++.+|..+..-.+|..+.|+..-
T Consensus 18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~lsng~~y~y~~~L 96 (219)
T PF07569_consen 18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLSNGDSYSYSPDL 96 (219)
T ss_pred EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEeCCCEEEecccc
Confidence 445678999999999999999998776543310 00000 0000233678888888877644444567888887653
|
These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus |
| >PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.27 Score=35.91 Aligned_cols=135 Identities=16% Similarity=0.247 Sum_probs=78.9
Q ss_pred CCCeEEEeeccCCCccEEEEeCCCcc-cc-cceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEeccc
Q psy7433 18 SCSLVATAGHSSESKNVCLWDSLLPQ-KK-ALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNA 95 (213)
Q Consensus 18 ~~~~l~~~g~~s~~~~i~iwd~~~~~-~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~ 95 (213)
....|+.+ ....|.+|.+.... .. +..+.+. -...+..++|. ++.++.|.. ....+.|+.++.....+..
T Consensus 104 ~~~~L~va----~kk~i~i~~~~~~~~~f~~~~ke~~-lp~~~~~i~~~--~~~i~v~~~-~~f~~idl~~~~~~~l~~~ 175 (275)
T PF00780_consen 104 GSRRLCVA----VKKKILIYEWNDPRNSFSKLLKEIS-LPDPPSSIAFL--GNKICVGTS-KGFYLIDLNTGSPSELLDP 175 (275)
T ss_pred cceEEEEE----ECCEEEEEEEECCcccccceeEEEE-cCCCcEEEEEe--CCEEEEEeC-CceEEEecCCCCceEEeCc
Confidence 34455555 46699999885421 22 3445544 34778999998 556777764 4588899987654433221
Q ss_pred C------------CCCeeEEEecCCCCEEEEecCCCcee---------------eceEEEEEccCCceEEEecCCCcEEE
Q psy7433 96 H------------ESPVKCLAIDPHEEFFVTGAGDGDIK---------------SPVKCLAIDPHEEFFVTGAGDGDIKV 148 (213)
Q Consensus 96 ~------------~~~i~~~~~~~~~~~l~~~~~~~~i~---------------~~v~~~~~~~~~~~l~~~~~dg~i~v 148 (213)
. ..++..+... ++.+|++-..-+... ..+..+++. ..|+++-+.+ .|.|
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~-~~e~Ll~~~~~g~fv~~~G~~~r~~~i~W~~~p~~~~~~--~pyli~~~~~-~iEV 251 (275)
T PF00780_consen 176 SDSSSSFKSRNSSSKPLGIFQLS-DNEFLLCYDNIGVFVNKNGEPSRKSTIQWSSAPQSVAYS--SPYLIAFSSN-SIEV 251 (275)
T ss_pred cCCcchhhhcccCCCceEEEEeC-CceEEEEecceEEEEcCCCCcCcccEEEcCCchhEEEEE--CCEEEEECCC-EEEE
Confidence 1 1233333333 345554432222111 334444443 4577776664 5999
Q ss_pred EEccCCeeeeeecCCC
Q psy7433 149 WSLSGNHLLYNFPGEH 164 (213)
Q Consensus 149 ~d~~~~~~~~~~~~~~ 164 (213)
|++.+++.++.+....
T Consensus 252 ~~~~~~~lvQ~i~~~~ 267 (275)
T PF00780_consen 252 RSLETGELVQTIPLPN 267 (275)
T ss_pred EECcCCcEEEEEECCC
Confidence 9999999999988753
|
These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity |
| >KOG4499|consensus | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.16 Score=35.89 Aligned_cols=95 Identities=7% Similarity=0.056 Sum_probs=64.6
Q ss_pred EEEEEeCCCCeEEEeeccCCCccEEEEeCC--Cc--ccccceeeeee----ecCCceEEEEecCCCEEEEEcCCCcEEEE
Q psy7433 11 SDFVFLGSCSLVATAGHSSESKNVCLWDSL--LP--QKKALVQAFVC----HDQGASSLVFAPQHQLLISAGKKGDICVI 82 (213)
Q Consensus 11 ~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~--~~--~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~d~~v~iw 82 (213)
+.++|+.+.+.+.... +.+-+|.-||.+ .+ .+.+.+-.++. .....-.++...+|++.+++-..++|...
T Consensus 161 Ngl~Wd~d~K~fY~iD--sln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~ 238 (310)
T KOG4499|consen 161 NGLAWDSDAKKFYYID--SLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKV 238 (310)
T ss_pred ccccccccCcEEEEEc--cCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEE
Confidence 4577887777666663 677888888842 11 11122222221 11122345667788888888888999999
Q ss_pred eccCceEEEecccCCCCeeEEEecC
Q psy7433 83 DLRQRVIRSRFNAHESPVKCLAIDP 107 (213)
Q Consensus 83 d~~~~~~~~~~~~~~~~i~~~~~~~ 107 (213)
|..+|+.+..+.-...++++++|--
T Consensus 239 dp~tGK~L~eiklPt~qitsccFgG 263 (310)
T KOG4499|consen 239 DPTTGKILLEIKLPTPQITSCCFGG 263 (310)
T ss_pred CCCCCcEEEEEEcCCCceEEEEecC
Confidence 9999999999887788899999864
|
|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.22 Score=41.62 Aligned_cols=87 Identities=14% Similarity=0.158 Sum_probs=54.5
Q ss_pred eceEEEEEccCCceEEEecCCCcEEEEEcc-CCeeeeeecCCC----------CceeEEEecCCCeEEEEeCCC----Ce
Q psy7433 123 SPVKCLAIDPHEEFFVTGAGDGDIKVWSLS-GNHLLYNFPGEH----------ARSSFFKHIGQGVTQLHVDGG----SR 187 (213)
Q Consensus 123 ~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~-~~~~~~~~~~~~----------~~~~~~~~~~~~v~~~~~~~~----~~ 187 (213)
..|..+.++|+|++++..+..| |.|..+. .......++... ....+.......|..+.|+|. ..
T Consensus 85 f~v~~i~~n~~g~~lal~G~~~-v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~ 163 (717)
T PF10168_consen 85 FEVHQISLNPTGSLLALVGPRG-VVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSH 163 (717)
T ss_pred eeEEEEEECCCCCEEEEEcCCc-EEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCe
Confidence 6788999999999888888765 4444442 100001111000 000111223468999999984 46
Q ss_pred EEEEecCCcEEEEeCCCCccccc
Q psy7433 188 LFSCGADGSMKVRQLPDRDAVVH 210 (213)
Q Consensus 188 l~s~~~d~~i~iw~~~~~~~~~~ 210 (213)
|+.-..|+.+|+||+.....+.+
T Consensus 164 l~vLtsdn~lR~y~~~~~~~p~~ 186 (717)
T PF10168_consen 164 LVVLTSDNTLRLYDISDPQHPWQ 186 (717)
T ss_pred EEEEecCCEEEEEecCCCCCCeE
Confidence 88999999999999987655543
|
It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells []. |
| >KOG2377|consensus | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.43 Score=37.24 Aligned_cols=106 Identities=10% Similarity=0.088 Sum_probs=69.9
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccc-cceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEecc
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKK-ALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLR 85 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~ 85 (213)
.++|.++.|++|.+.||.- ..+.+|.+.+....++. .....-+.....|....|+.+ .-+|.....| +-+|-+.
T Consensus 66 ~G~I~SIkFSlDnkilAVQ---R~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s-~e~A~i~~~G-~e~y~v~ 140 (657)
T KOG2377|consen 66 KGEIKSIKFSLDNKILAVQ---RTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSS-TEIAFITDQG-IEFYQVL 140 (657)
T ss_pred CCceeEEEeccCcceEEEE---ecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecC-eeEEEEecCC-eEEEEEc
Confidence 4689999999999999998 78999999997321111 112222333456888899866 4555554443 5556554
Q ss_pred Cc-eEEEecccCCCCeeEEEecCCCCEEEEecC
Q psy7433 86 QR-VIRSRFNAHESPVKCLAIDPHEEFFVTGAG 117 (213)
Q Consensus 86 ~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 117 (213)
.. +.++..+.+...|.-..|+++.+.++.++.
T Consensus 141 pekrslRlVks~~~nvnWy~yc~et~v~LL~t~ 173 (657)
T KOG2377|consen 141 PEKRSLRLVKSHNLNVNWYMYCPETAVILLSTT 173 (657)
T ss_pred hhhhhhhhhhhcccCccEEEEccccceEeeecc
Confidence 32 344455667778888889998776554443
|
|
| >KOG1897|consensus | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.69 Score=39.45 Aligned_cols=76 Identities=12% Similarity=-0.038 Sum_probs=42.5
Q ss_pred cCceEEEEEeCC--CC----eEEEeeccCCCccEEEEeCCCcccccceeeee--eecCCceEEEEecCCCEEEEEcCCCc
Q psy7433 7 NKITSDFVFLGS--CS----LVATAGHSSESKNVCLWDSLLPQKKALVQAFV--CHDQGASSLVFAPQHQLLISAGKKGD 78 (213)
Q Consensus 7 ~~~v~~~~~~~~--~~----~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~ 78 (213)
...|.|+.++|- ++ +++.| .++..+.+.-.-......+...+. .-+..+.-..|-.+..+|.++..||.
T Consensus 530 e~evaCLDisp~~d~~~~s~~~aVG---~Ws~~~~~l~~~pd~~~~~~~~l~~~~iPRSIl~~~~e~d~~yLlvalgdG~ 606 (1096)
T KOG1897|consen 530 EYEVACLDISPLGDAPNKSRLLAVG---LWSDISMILTFLPDLILITHEQLSGEIIPRSILLTTFEGDIHYLLVALGDGA 606 (1096)
T ss_pred cceeEEEecccCCCCCCcceEEEEE---eecceEEEEEECCCcceeeeeccCCCccchheeeEEeeccceEEEEEcCCce
Confidence 356899999973 32 56666 455555544331111111111111 12234455556556789999999999
Q ss_pred EEEEecc
Q psy7433 79 ICVIDLR 85 (213)
Q Consensus 79 v~iwd~~ 85 (213)
+..|-+.
T Consensus 607 l~~fv~d 613 (1096)
T KOG1897|consen 607 LLYFVLD 613 (1096)
T ss_pred EEEEEEE
Confidence 8877554
|
|
| >KOG4460|consensus | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.36 Score=38.27 Aligned_cols=134 Identities=10% Similarity=0.034 Sum_probs=71.2
Q ss_pred EEEEcCCCcEEEEeccCceE-EEecccCCCCeeEEEecCCCCEEEEecCCCceeeceEEEEEccCCceEEEecCCCcEEE
Q psy7433 70 LISAGKKGDICVIDLRQRVI-RSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPHEEFFVTGAGDGDIKV 148 (213)
Q Consensus 70 l~~~~~d~~v~iwd~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~~~~l~~~~~dg~i~v 148 (213)
++.+..| .++.||-+.... +..+++..++-...+..+-.. + --+..+...|..+..++.|..++..+.+|.+.+
T Consensus 55 ~~~~~gD-~lf~Wd~~ds~Llv~~lR~~~~~~~~~a~~q~q~-l---~P~~~V~feV~~vl~s~~GS~VaL~G~~Gi~vM 129 (741)
T KOG4460|consen 55 VVFGLGD-ELFLWDGEDSSLLVVRLRGPSGGGEEPALSQYQR-L---LPINPVLFEVYQVLLSPTGSHVALIGIKGLMVM 129 (741)
T ss_pred hhcccCC-EEEEEecCcceEEEEEeccCCCCcccccccccce-e---ccCCcceEEEEEEEecCCCceEEEecCCeeEEE
Confidence 4455555 899999876532 233343222222222222111 0 012223356778888888888888888886654
Q ss_pred EEc---------cCCeeeeeecCCCC-ceeEEEecCCCeEEEEeCCCC----eEEEEecCCcEEEEeCCCCccc
Q psy7433 149 WSL---------SGNHLLYNFPGEHA-RSSFFKHIGQGVTQLHVDGGS----RLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 149 ~d~---------~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~----~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
+=. +.++..-..+.... ...+.+...-.+..++|+|+. .|..-+.|+.||+||+.+...+
T Consensus 130 eLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL~iL~sdnviRiy~lS~~tel 203 (741)
T KOG4460|consen 130 ELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHLVLLTSDNVIRIYSLSEPTEL 203 (741)
T ss_pred EchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCceEEEEecCcEEEEEecCCcchh
Confidence 421 12221111111000 001111112357788999954 5888889999999999876543
|
|
| >PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.45 Score=36.44 Aligned_cols=86 Identities=12% Similarity=0.056 Sum_probs=42.1
Q ss_pred EEeCCCCeEEEeeccCCCcc--EEEEeCCCcccccceeeeeeec-CCceEEEEecCCCEEEEEcCCCcEEEEeccCceEE
Q psy7433 14 VFLGSCSLVATAGHSSESKN--VCLWDSLLPQKKALVQAFVCHD-QGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIR 90 (213)
Q Consensus 14 ~~~~~~~~l~~~g~~s~~~~--i~iwd~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~ 90 (213)
+|.++|+.|+.++ ..++. +.+.|+ .+ ..+..+.... .......++|+.+.++-...+..|.-.|+++.+..
T Consensus 42 ~ft~dG~kllF~s--~~dg~~nly~lDL---~t-~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~~ 115 (386)
T PF14583_consen 42 CFTDDGRKLLFAS--DFDGNRNLYLLDL---AT-GEITQLTDGPGDNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLEER 115 (386)
T ss_dssp -B-TTS-EEEEEE---TTSS-EEEEEET---TT--EEEE---SS-B-TTT-EE-TTSSEEEEEETTTEEEEEETTT--EE
T ss_pred CcCCCCCEEEEEe--ccCCCcceEEEEc---cc-CEEEECccCCCCCccceEEecCCCeEEEEECCCeEEEEECCcCcEE
Confidence 5677898777765 34555 455555 22 3333444332 22335667788887766555568888898887655
Q ss_pred EecccCCCCeeEEEe
Q psy7433 91 SRFNAHESPVKCLAI 105 (213)
Q Consensus 91 ~~~~~~~~~i~~~~~ 105 (213)
..+.......-...|
T Consensus 116 ~vy~~p~~~~g~gt~ 130 (386)
T PF14583_consen 116 VVYEVPDDWKGYGTW 130 (386)
T ss_dssp EEEE--TTEEEEEEE
T ss_pred EEEECCcccccccce
Confidence 444444444433444
|
|
| >PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes [] | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.36 Score=40.02 Aligned_cols=164 Identities=12% Similarity=0.185 Sum_probs=88.8
Q ss_pred CCeEEEeeccCCCccEEEEeCCCcccccc---eeeee----------------eecCCceEEEEec--CCCEEEEEcCCC
Q psy7433 19 CSLVATAGHSSESKNVCLWDSLLPQKKAL---VQAFV----------------CHDQGASSLVFAP--QHQLLISAGKKG 77 (213)
Q Consensus 19 ~~~l~~~g~~s~~~~i~iwd~~~~~~~~~---~~~~~----------------~~~~~v~~~~~~~--~~~~l~~~~~d~ 77 (213)
.++++++ ..+.|.||+.+....... ...+. .....|+-+...- +...|+.+.+||
T Consensus 49 ~n~LFiA----~~s~I~Vy~~d~l~~~p~~~p~~~~~t~p~~~~~~D~~~s~~p~PHtIN~i~v~~lg~~EVLl~c~DdG 124 (717)
T PF08728_consen 49 RNLLFIA----YQSEIYVYDPDGLTQLPSRKPCLRFDTKPEFTSTPDRLISTWPFPHTINFIKVGDLGGEEVLLLCTDDG 124 (717)
T ss_pred CCEEEEE----ECCEEEEEecCCcccccccccccccccCccccccccccccCCCCCceeeEEEecccCCeeEEEEEecCC
Confidence 6666666 589999999853222110 00000 0112344444433 446788999999
Q ss_pred cEEEEeccCc-eEEEecccC-CCCeeEEEecCCCCEEEEecCCCceeeceEEEEEc--cCCceEEEecCCCcEEEEEccC
Q psy7433 78 DICVIDLRQR-VIRSRFNAH-ESPVKCLAIDPHEEFFVTGAGDGDIKSPVKCLAID--PHEEFFVTGAGDGDIKVWSLSG 153 (213)
Q Consensus 78 ~v~iwd~~~~-~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~--~~~~~l~~~~~dg~i~v~d~~~ 153 (213)
.|.+|.+++- +.+...... ...-..+...|+-. . .+......++++ ...++||+++....|.||-+..
T Consensus 125 ~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~--~------~v~~SaWGLdIh~~~~~rlIAVSsNs~~VTVFaf~l 196 (717)
T PF08728_consen 125 DVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFH--L------RVGASAWGLDIHDYKKSRLIAVSSNSQEVTVFAFAL 196 (717)
T ss_pred eEEEEEHHHHHHHHHhhccccccccccccCCCCeE--e------ecCCceeEEEEEecCcceEEEEecCCceEEEEEEec
Confidence 9999987541 000001000 00000022222210 0 111456778887 7778888888888888886643
Q ss_pred Ce-eeeeecCCCCceeEEEecCCCeEEEEeCCC-----C--eEEEEecCCcEEEEeC
Q psy7433 154 NH-LLYNFPGEHARSSFFKHIGQGVTQLHVDGG-----S--RLFSCGADGSMKVRQL 202 (213)
Q Consensus 154 ~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~--~l~s~~~d~~i~iw~~ 202 (213)
.. .......+. +..-|.+|+|-++ + .+++++-.|.+.+|++
T Consensus 197 ~~~r~~~~~s~~--------~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 197 VDERFYHVPSHQ--------HSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred cccccccccccc--------cccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 21 111111111 2256888888652 2 5788899999999888
|
RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance []. |
| >KOG2280|consensus | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.89 Score=37.70 Aligned_cols=39 Identities=26% Similarity=0.404 Sum_probs=31.4
Q ss_pred eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeec
Q psy7433 123 SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFP 161 (213)
Q Consensus 123 ~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~ 161 (213)
..+..+..||+.++|+.=...|.|.+-+....+....+.
T Consensus 217 ~~~~ki~VS~n~~~laLyt~~G~i~~vs~D~~~~lce~~ 255 (829)
T KOG2280|consen 217 SSVVKISVSPNRRFLALYTETGKIWVVSIDLSQILCEFN 255 (829)
T ss_pred ceEEEEEEcCCcceEEEEecCCcEEEEecchhhhhhccC
Confidence 567888999999999999999999988776666555554
|
|
| >KOG3630|consensus | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.059 Score=46.15 Aligned_cols=129 Identities=13% Similarity=0.053 Sum_probs=80.7
Q ss_pred ceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccc--eeeee------eecCCceEEEEecCCC-EEEEEcCCCcE
Q psy7433 9 ITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKAL--VQAFV------CHDQGASSLVFAPQHQ-LLISAGKKGDI 79 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~--~~~~~------~~~~~v~~~~~~~~~~-~l~~~~~d~~v 79 (213)
++..+...+|+...+.... +++-.|..||++.-..... .+-+. ....-..++.|+|.-. ..+.+..|+.|
T Consensus 102 pi~~~v~~~D~t~s~v~~t-sng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl 180 (1405)
T KOG3630|consen 102 PIVIFVCFHDATDSVVVST-SNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSL 180 (1405)
T ss_pred cceEEEeccCCceEEEEEe-cCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccch
Confidence 4556666677665554421 4556788999853211110 11111 1223456788988543 34566678888
Q ss_pred EEEeccCceE-EEecccCCCCeeEEEecCCCCEEEEecCCCcee--------------------eceEEEEEccCCceEE
Q psy7433 80 CVIDLRQRVI-RSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK--------------------SPVKCLAIDPHEEFFV 138 (213)
Q Consensus 80 ~iwd~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~--------------------~~v~~~~~~~~~~~l~ 138 (213)
.+..+..... +..++ .....++++|+|.|++++.|..+|++. ..|.+++|-....+++
T Consensus 181 ~V~~~~~~~~~v~s~p-~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~leik~~ip~Pp~~e~yrvl~v~Wl~t~eflv 259 (1405)
T KOG3630|consen 181 RVKSTKQLAQNVTSFP-VTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSLEIKSEIPEPPVEENYRVLSVTWLSTQEFLV 259 (1405)
T ss_pred hhhhhhhhhhhhcccC-cccceeeEEeccccceeeEecCCCeEEEeecccceeecccCCCcCCCcceeEEEEecceeEEE
Confidence 8876654322 22222 445688999999999999999999875 6789999987666554
Q ss_pred E
Q psy7433 139 T 139 (213)
Q Consensus 139 ~ 139 (213)
+
T Consensus 260 v 260 (1405)
T KOG3630|consen 260 V 260 (1405)
T ss_pred E
Confidence 3
|
|
| >TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.96 Score=36.68 Aligned_cols=56 Identities=11% Similarity=0.224 Sum_probs=36.4
Q ss_pred CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCcccc
Q psy7433 144 GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDAVV 209 (213)
Q Consensus 144 g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~~ 209 (213)
|.|.-+|+.+++..-..+.... ...+.....++.++.++.+|.++.+|..+++.+-
T Consensus 441 g~l~AiD~~tGk~~W~~~~~~p----------~~~~~l~t~g~lvf~g~~~G~l~a~D~~TGe~lw 496 (527)
T TIGR03075 441 GSLIAWDPITGKIVWEHKEDFP----------LWGGVLATAGDLVFYGTLEGYFKAFDAKTGEELW 496 (527)
T ss_pred eeEEEEeCCCCceeeEecCCCC----------CCCcceEECCcEEEEECCCCeEEEEECCCCCEeE
Confidence 5677788888877666554321 1111111234577778889999999999997653
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens. |
| >KOG4441|consensus | Back alignment and domain information |
|---|
Probab=95.61 E-value=1 Score=36.90 Aligned_cols=100 Identities=16% Similarity=0.147 Sum_probs=52.1
Q ss_pred CCCeEEEeeccC---CCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCc-----EEEEeccCceE
Q psy7433 18 SCSLVATAGHSS---ESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGD-----ICVIDLRQRVI 89 (213)
Q Consensus 18 ~~~~l~~~g~~s---~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-----v~iwd~~~~~~ 89 (213)
++...++||+.+ .-.++..||..... +..+..+............ +|.+.+.|+.||. +-.||.++.+.
T Consensus 332 ~~~lYv~GG~~~~~~~l~~ve~YD~~~~~-W~~~a~M~~~R~~~~v~~l--~g~iYavGG~dg~~~l~svE~YDp~~~~W 408 (571)
T KOG4441|consen 332 NGKLYVVGGYDSGSDRLSSVERYDPRTNQ-WTPVAPMNTKRSDFGVAVL--DGKLYAVGGFDGEKSLNSVECYDPVTNKW 408 (571)
T ss_pred CCEEEEEccccCCCcccceEEEecCCCCc-eeccCCccCccccceeEEE--CCEEEEEeccccccccccEEEecCCCCcc
Confidence 457788887521 12567788875432 3333333322222222222 6778888988864 66677766532
Q ss_pred EEecccCCCCeeEEEe-cCCCCEEEEecCCCce
Q psy7433 90 RSRFNAHESPVKCLAI-DPHEEFFVTGAGDGDI 121 (213)
Q Consensus 90 ~~~~~~~~~~i~~~~~-~~~~~~l~~~~~~~~i 121 (213)
...-+... +...... .-++...++|+.++.-
T Consensus 409 ~~va~m~~-~r~~~gv~~~~g~iYi~GG~~~~~ 440 (571)
T KOG4441|consen 409 TPVAPMLT-RRSGHGVAVLGGKLYIIGGGDGSS 440 (571)
T ss_pred cccCCCCc-ceeeeEEEEECCEEEEEcCcCCCc
Confidence 21111111 2222222 2257788888877765
|
|
| >PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []) | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.19 Score=34.04 Aligned_cols=27 Identities=11% Similarity=0.208 Sum_probs=20.7
Q ss_pred ceEEEEEeCCCCeEEEeeccCCCccEEEEeCC
Q psy7433 9 ITSDFVFLGSCSLVATAGHSSESKNVCLWDSL 40 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~ 40 (213)
...+++||.||++.+.+ +..|.|.+..
T Consensus 6 ~~~~l~WS~Dg~laV~t-----~~~v~IL~~~ 32 (173)
T PF12657_consen 6 CPNALAWSEDGQLAVAT-----GESVHILDPQ 32 (173)
T ss_pred CCcCeeECCCCCEEEEc-----CCeEEEEecc
Confidence 45789999999777765 6788888653
|
The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 []. |
| >KOG2377|consensus | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.91 Score=35.55 Aligned_cols=122 Identities=7% Similarity=0.035 Sum_probs=73.4
Q ss_pred CCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEE----ecccCCCCeeEEEe
Q psy7433 30 ESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRS----RFNAHESPVKCLAI 105 (213)
Q Consensus 30 ~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~----~~~~~~~~i~~~~~ 105 (213)
..|.+.=|-+..+....++..-....++|.++.||+|++.||.--.+..|.+++....+... +.+.....|....|
T Consensus 41 rSggatgvvvkgpndDVpiSfdm~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W 120 (657)
T KOG2377|consen 41 RSGGATGVVVKGPNDDVPISFDMDDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCW 120 (657)
T ss_pred ecCCeeEEEEeCCCCCCCceeeecCCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEE
Confidence 46667777764333333333333356799999999999999999999999999984433222 22333445777888
Q ss_pred cCCCCEEEEecCCC-----------cee------eceEEEEEccCCceEEEec--CCCcEEEEEcc
Q psy7433 106 DPHEEFFVTGAGDG-----------DIK------SPVKCLAIDPHEEFFVTGA--GDGDIKVWSLS 152 (213)
Q Consensus 106 ~~~~~~l~~~~~~~-----------~i~------~~v~~~~~~~~~~~l~~~~--~dg~i~v~d~~ 152 (213)
... .-++.....| .++ ..|.-..|.++.+.++.++ ..+.+.=+-++
T Consensus 121 ~~s-~e~A~i~~~G~e~y~v~pekrslRlVks~~~nvnWy~yc~et~v~LL~t~~~~n~lnpf~~~ 185 (657)
T KOG2377|consen 121 TSS-TEIAFITDQGIEFYQVLPEKRSLRLVKSHNLNVNWYMYCPETAVILLSTTVLENVLNPFHFR 185 (657)
T ss_pred ecC-eeEEEEecCCeEEEEEchhhhhhhhhhhcccCccEEEEccccceEeeeccccccccccEEEe
Confidence 765 3333333333 222 5677778888877433332 34444444444
|
|
| >PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.65 Score=33.91 Aligned_cols=64 Identities=17% Similarity=0.223 Sum_probs=42.5
Q ss_pred CCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceE
Q psy7433 17 GSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVI 89 (213)
Q Consensus 17 ~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~ 89 (213)
..++.|+.| ..+| +.+++.... ....+.. +...|..+...|+-+.|++-+ |+.+.++++..-..
T Consensus 5 ~~~~~L~vG---t~~G-l~~~~~~~~--~~~~~i~--~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~ 68 (275)
T PF00780_consen 5 SWGDRLLVG---TEDG-LYVYDLSDP--SKPTRIL--KLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEP 68 (275)
T ss_pred cCCCEEEEE---ECCC-EEEEEecCC--ccceeEe--ecceEEEEEEecccCEEEEEc-CCccEEEEchhhcc
Confidence 356777777 5777 899997211 1222221 223399999999877777665 49999999976543
|
These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity |
| >PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.68 Score=35.50 Aligned_cols=107 Identities=13% Similarity=0.111 Sum_probs=50.7
Q ss_pred CceEEEEEeC-CCCeEEEeeccCCCcc-EEEEeCCCcccccceeeeeee--cCCceEEEEecCCCEEEEE-----cCCCc
Q psy7433 8 KITSDFVFLG-SCSLVATAGHSSESKN-VCLWDSLLPQKKALVQAFVCH--DQGASSLVFAPQHQLLISA-----GKKGD 78 (213)
Q Consensus 8 ~~v~~~~~~~-~~~~l~~~g~~s~~~~-i~iwd~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~-----~~d~~ 78 (213)
..+.-+.|+| +...|+-|-++..+.. -+||-++. .+...+.+..+ ...+.-=-|.|+|..|.-- +.+..
T Consensus 188 ~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~--dg~~~~~v~~~~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~ 265 (386)
T PF14583_consen 188 DWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINT--DGSNVKKVHRRMEGESVGHEFWVPDGSTIWYDSYTPGGQDFW 265 (386)
T ss_dssp S-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEET--TS---EESS---TTEEEEEEEE-TTSS-EEEEEEETTT--EE
T ss_pred ccccCcccCCCCCCEEEEeccCCcceeceEEEEEEc--CCCcceeeecCCCCcccccccccCCCCEEEEEeecCCCCceE
Confidence 4456678888 5556666644444542 47787642 22222222222 2234445689999876642 23456
Q ss_pred EEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCC
Q psy7433 79 ICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGD 118 (213)
Q Consensus 79 v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~ 118 (213)
|.-+|+.+++....... .....+..++++++++-=+.|
T Consensus 266 i~~~d~~t~~~~~~~~~--p~~~H~~ss~Dg~L~vGDG~d 303 (386)
T PF14583_consen 266 IAGYDPDTGERRRLMEM--PWCSHFMSSPDGKLFVGDGGD 303 (386)
T ss_dssp EEEE-TTT--EEEEEEE---SEEEEEE-TTSSEEEEEE--
T ss_pred EEeeCCCCCCceEEEeC--CceeeeEEcCCCCEEEecCCC
Confidence 77788888755433221 245567777888877654443
|
|
| >TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain | Back alignment and domain information |
|---|
Probab=95.04 E-value=1.2 Score=34.29 Aligned_cols=17 Identities=18% Similarity=0.337 Sum_probs=11.8
Q ss_pred eEEEEEccCCceEEEec
Q psy7433 125 VKCLAIDPHEEFFVTGA 141 (213)
Q Consensus 125 v~~~~~~~~~~~l~~~~ 141 (213)
...+.|.|||.+.++-+
T Consensus 126 ~~~l~~gpDG~LYv~~G 142 (367)
T TIGR02604 126 LNSLAWGPDGWLYFNHG 142 (367)
T ss_pred ccCceECCCCCEEEecc
Confidence 56788889988555443
|
All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs. |
| >PF14761 HPS3_N: Hermansky-Pudlak syndrome 3 | Back alignment and domain information |
|---|
Probab=94.86 E-value=0.88 Score=31.85 Aligned_cols=49 Identities=22% Similarity=0.223 Sum_probs=35.6
Q ss_pred CEEEEEcCCCcEEEEeccC--ceEEEecccCCCCeeEEEecCCCCEEEEecC
Q psy7433 68 QLLISAGKKGDICVIDLRQ--RVIRSRFNAHESPVKCLAIDPHEEFFVTGAG 117 (213)
Q Consensus 68 ~~l~~~~~d~~v~iwd~~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 117 (213)
+.|+.+...+.|.+|++.+ .+++..|.. -+.|..+.++..|+++++-=+
T Consensus 29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~T-v~~V~~l~y~~~GDYlvTlE~ 79 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLEQEECPLLCTFST-VGRVLQLVYSEAGDYLVTLEE 79 (215)
T ss_pred ceEEEEcCCCEEEEEEcccCCCceeEEEcc-hhheeEEEeccccceEEEEEe
Confidence 3444435567899999983 356666764 488899999999999887643
|
|
| >COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.81 E-value=0.19 Score=39.07 Aligned_cols=150 Identities=11% Similarity=0.140 Sum_probs=87.0
Q ss_pred ccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeee-eeecC----Cce-EEEEecCCCEEEEEcCCCcE
Q psy7433 6 HNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAF-VCHDQ----GAS-SLVFAPQHQLLISAGKKGDI 79 (213)
Q Consensus 6 h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~-~~~~~----~v~-~~~~~~~~~~l~~~~~d~~v 79 (213)
.-..|..+-..|+|+.+..- ...++.++++.+ ..-..+.+ ....+ .|+ .+..-..|..++.++.||.|
T Consensus 219 ~~~~v~qllL~Pdg~~LYv~----~g~~~~v~~L~~--r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg~SLLv~~~dG~v 292 (733)
T COG4590 219 PFSDVSQLLLTPDGKTLYVR----TGSELVVALLDK--RSLQIRKLVDDSPGDSRHQVTEQLYLLSGGFSLLVVHEDGLV 292 (733)
T ss_pred CccchHhhEECCCCCEEEEe----cCCeEEEEeecc--cccchhhhhhcCCCchHHHHHHHHHHHhCceeEEEEcCCCce
Confidence 34567778888999998887 457888888732 11111111 11111 122 12222345668888889988
Q ss_pred EEE-eccCc-----eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee----------------eceEEEEEccCCceE
Q psy7433 80 CVI-DLRQR-----VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----------------SPVKCLAIDPHEEFF 137 (213)
Q Consensus 80 ~iw-d~~~~-----~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------~~v~~~~~~~~~~~l 137 (213)
.-| |++.+ ..++.++-...++..+.-..+.+-|+.-..+|++. ..+.-+++||.+.++
T Consensus 293 sQWFdvr~~~~p~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL~~~~~~~~~~~~~Sp~~~~L 372 (733)
T COG4590 293 SQWFDVRRDGQPHLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLLFERAYQAPQLVAMSPNQAYL 372 (733)
T ss_pred eeeeeeecCCCCcceeeeccccCcccceeeccccccceEEEEcCCCceeeeecccCcceehhhhhcCcceeeeCcccchh
Confidence 876 55432 22233332333443333333334566666666553 566778999999988
Q ss_pred EEecCCCcEEEEEccCCeeeeeecC
Q psy7433 138 VTGAGDGDIKVWSLSGNHLLYNFPG 162 (213)
Q Consensus 138 ~~~~~dg~i~v~d~~~~~~~~~~~~ 162 (213)
++-. .|.++++.+.+..+..++.+
T Consensus 373 l~e~-~gki~~~~l~Nr~Peiswsa 396 (733)
T COG4590 373 LSED-QGKIRLAQLENRNPEISWSA 396 (733)
T ss_pred eeec-CCceEEEEecCCCCCccHHH
Confidence 8764 46899999877666555443
|
|
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=94.77 E-value=2.2 Score=35.95 Aligned_cols=104 Identities=9% Similarity=0.043 Sum_probs=57.5
Q ss_pred ceEEEEEeCCCCeEEEeec--cCCCccEEEEeCCCcccccce-eeeeeecCCceEEEEecCCCEEEEEcCC------CcE
Q psy7433 9 ITSDFVFLGSCSLVATAGH--SSESKNVCLWDSLLPQKKALV-QAFVCHDQGASSLVFAPQHQLLISAGKK------GDI 79 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~--~s~~~~i~iwd~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~v 79 (213)
.+..+.++|++++|+.+-- ++....|++.|+. ++..+ ..+.. .-..++|.++++.|+....+ ..|
T Consensus 128 ~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~---tg~~l~~~i~~---~~~~~~w~~D~~~~~y~~~~~~~~~~~~v 201 (686)
T PRK10115 128 TLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLE---TGNWYPELLDN---VEPSFVWANDSWTFYYVRKHPVTLLPYQV 201 (686)
T ss_pred EEeEEEECCCCCEEEEEecCCCcEEEEEEEEECC---CCCCCCccccC---cceEEEEeeCCCEEEEEEecCCCCCCCEE
Confidence 4667889999999887631 1223458888884 33322 11211 11468999998877655432 357
Q ss_pred EEEeccCc--eEEEecccCCCCee-EEEecCCCCEEEEecCC
Q psy7433 80 CVIDLRQR--VIRSRFNAHESPVK-CLAIDPHEEFFVTGAGD 118 (213)
Q Consensus 80 ~iwd~~~~--~~~~~~~~~~~~i~-~~~~~~~~~~l~~~~~~ 118 (213)
..+++.++ +....+........ ....+.++++++..+..
T Consensus 202 ~~h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~ 243 (686)
T PRK10115 202 WRHTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLAS 243 (686)
T ss_pred EEEECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEEC
Confidence 77788776 33333333223333 23334466665544433
|
|
| >KOG2247|consensus | Back alignment and domain information |
|---|
Probab=94.67 E-value=0.0063 Score=47.08 Aligned_cols=129 Identities=17% Similarity=0.168 Sum_probs=88.9
Q ss_pred CceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCc-ee-------------
Q psy7433 57 GASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGD-IK------------- 122 (213)
Q Consensus 57 ~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~-i~------------- 122 (213)
......|-|++.-++.++.+..+..||-. ++...... .++....++|..++..+++..+... +.
T Consensus 36 ~pi~~~w~~e~~nlavaca~tiv~~YD~a-gq~~le~n-~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytqqLE 113 (615)
T KOG2247|consen 36 GPIIHRWRPEGHNLAVACANTIVIYYDKA-GQVILELN-PTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQLE 113 (615)
T ss_pred ccceeeEecCCCceehhhhhhHHHhhhhh-cceecccC-CchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHHHHh
Confidence 34456788877668888888888888854 44333333 3445567788877776655544332 22
Q ss_pred ----eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcE
Q psy7433 123 ----SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSM 197 (213)
Q Consensus 123 ----~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i 197 (213)
..-.-+.|++....++.+...|.+.+++.++.+.+.....|. ..+++++|.+.++.+.++.|..+
T Consensus 114 ~gg~~s~sll~wsKg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~----------RRgtq~av~lEd~vil~dcd~~L 182 (615)
T KOG2247|consen 114 SGGTSSKSLLAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQ----------RRGTQIAVTLEDYVILCDCDNTL 182 (615)
T ss_pred ccCcchHHHHhhccCCccccccccccceEEEeccchhhhhhhcccc----------cceeEEEecccceeeecCcHHHH
Confidence 111226788888889999999999999998887777665555 57899999988887777666543
|
|
| >PHA03098 kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=94.41 E-value=2.3 Score=34.57 Aligned_cols=68 Identities=9% Similarity=0.102 Sum_probs=33.4
Q ss_pred CCCeEEEeeccCCC---ccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCC-----CcEEEEeccCce
Q psy7433 18 SCSLVATAGHSSES---KNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKK-----GDICVIDLRQRV 88 (213)
Q Consensus 18 ~~~~l~~~g~~s~~---~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~iwd~~~~~ 88 (213)
++.+++.||..... ..+..||..+. +...+..+.........+. -++...+.||.+ ..+..||..+.+
T Consensus 294 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~-~W~~~~~~~~~R~~~~~~~--~~~~lyv~GG~~~~~~~~~v~~yd~~~~~ 369 (534)
T PHA03098 294 NNVIYFIGGMNKNNLSVNSVVSYDTKTK-SWNKVPELIYPRKNPGVTV--FNNRIYVIGGIYNSISLNTVESWKPGESK 369 (534)
T ss_pred CCEEEEECCCcCCCCeeccEEEEeCCCC-eeeECCCCCcccccceEEE--ECCEEEEEeCCCCCEecceEEEEcCCCCc
Confidence 45667777641111 25677886432 2222222221122222222 266777777765 347778887654
|
|
| >PLN00033 photosystem II stability/assembly factor; Provisional | Back alignment and domain information |
|---|
Probab=94.38 E-value=1.9 Score=33.60 Aligned_cols=127 Identities=13% Similarity=0.147 Sum_probs=70.6
Q ss_pred eEEEEEeCCCCeEEEeeccCCCccEE-EEeCCCccc-ccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCc
Q psy7433 10 TSDFVFLGSCSLVATAGHSSESKNVC-LWDSLLPQK-KALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR 87 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~s~~~~i~-iwd~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~ 87 (213)
...+..++++.+++.+ ..|.+. -||- ..+ .+.+. ......+..+.|.+++..++++ ..|.+. +....+
T Consensus 241 f~~v~~~~dG~~~~vg----~~G~~~~s~d~--G~~~W~~~~--~~~~~~l~~v~~~~dg~l~l~g-~~G~l~-~S~d~G 310 (398)
T PLN00033 241 FSTVNRSPDGDYVAVS----SRGNFYLTWEP--GQPYWQPHN--RASARRIQNMGWRADGGLWLLT-RGGGLY-VSKGTG 310 (398)
T ss_pred eeeEEEcCCCCEEEEE----CCccEEEecCC--CCcceEEec--CCCccceeeeeEcCCCCEEEEe-CCceEE-EecCCC
Confidence 4445667788887777 444433 3442 111 11111 1224567889999998877766 455553 333344
Q ss_pred e-----EEEeccc--CCCCeeEEEecCCCCEEEEecCCCcee-------------------eceEEEEEccCCceEEEec
Q psy7433 88 V-----IRSRFNA--HESPVKCLAIDPHEEFFVTGAGDGDIK-------------------SPVKCLAIDPHEEFFVTGA 141 (213)
Q Consensus 88 ~-----~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~~~~i~-------------------~~v~~~~~~~~~~~l~~~~ 141 (213)
+ ....... ....+..+.+.+++..+++| ..|.+. ..++.+.|.++++.+++|
T Consensus 311 ~~~~~~~f~~~~~~~~~~~l~~v~~~~d~~~~a~G-~~G~v~~s~D~G~tW~~~~~~~~~~~~ly~v~f~~~~~g~~~G- 388 (398)
T PLN00033 311 LTEEDFDFEEADIKSRGFGILDVGYRSKKEAWAAG-GSGILLRSTDGGKSWKRDKGADNIAANLYSVKFFDDKKGFVLG- 388 (398)
T ss_pred CcccccceeecccCCCCcceEEEEEcCCCcEEEEE-CCCcEEEeCCCCcceeEccccCCCCcceeEEEEcCCCceEEEe-
Confidence 2 2222221 22357888888877655554 445443 356788887776655555
Q ss_pred CCCcEEE
Q psy7433 142 GDGDIKV 148 (213)
Q Consensus 142 ~dg~i~v 148 (213)
.+|.|.-
T Consensus 389 ~~G~il~ 395 (398)
T PLN00033 389 NDGVLLR 395 (398)
T ss_pred CCcEEEE
Confidence 4566543
|
|
| >KOG2247|consensus | Back alignment and domain information |
|---|
Probab=94.36 E-value=0.017 Score=44.84 Aligned_cols=191 Identities=9% Similarity=0.074 Sum_probs=104.0
Q ss_pred ceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCce
Q psy7433 9 ITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRV 88 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~ 88 (213)
...+++|..++..++... ...+.+.+||++..... .+.. .+ ...-.-+.|++....++.+...|.+.+++..+.+
T Consensus 76 ~aldm~wDkegdvlavlA--ek~~piylwd~n~eytq-qLE~-gg-~~s~sll~wsKg~~el~ig~~~gn~viynhgtsR 150 (615)
T KOG2247|consen 76 KALDMAWDKEGDVLAVLA--EKTGPIYLWDVNSEYTQ-QLES-GG-TSSKSLLAWSKGTPELVIGNNAGNIVIYNHGTSR 150 (615)
T ss_pred hHhhhhhccccchhhhhh--hcCCCeeechhhhhhHH-HHhc-cC-cchHHHHhhccCCccccccccccceEEEeccchh
Confidence 345677777777655443 47889999999532222 2211 11 1112227789888889999899999999988776
Q ss_pred EEEecccCCCCeeEEEecCCCCEEEEecCCCcee--------eceEEEEEccCCc---eEEEecCCCc-EEEEEccCCee
Q psy7433 89 IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK--------SPVKCLAIDPHEE---FFVTGAGDGD-IKVWSLSGNHL 156 (213)
Q Consensus 89 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~--------~~v~~~~~~~~~~---~l~~~~~dg~-i~v~d~~~~~~ 156 (213)
.....-.|..+++++++.+.+. .+.++.+..+. ...+.+---|+.- ++..-...+. ..+-.+..++.
T Consensus 151 ~iiv~Gkh~RRgtq~av~lEd~-vil~dcd~~L~v~~qegeta~ltevggepdnm~~~y~k~n~w~kage~m~sVvsgKk 229 (615)
T KOG2247|consen 151 RIIVMGKHQRRGTQIAVTLEDY-VILCDCDNTLSVTTQEGETASLTEVGGEPDNMDFFYGKVNGWGKAGETMVSVVSGKK 229 (615)
T ss_pred hhhhhcccccceeEEEecccce-eeecCcHHHHHHhhhccceeeeeeccCccchhhhheeeeeccccccceeeeeeecHH
Confidence 6555555888999999999764 44555555443 1122222222211 1111111000 00111111111
Q ss_pred ee---eecC-CCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCC
Q psy7433 157 LY---NFPG-EHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 157 ~~---~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 205 (213)
.. .+.. ..+....+....+-+.|+.|--|+++.-+-.-|.|..-...+.
T Consensus 230 hl~yak~nE~D~pval~fq~~~gni~cyrwylDg~i~igf~ag~iV~iS~h~a 282 (615)
T KOG2247|consen 230 HLMYAKYNELDEPVALQFQEKYGNIHCYRWYLDGYILIGFDAGYIVSISAHNA 282 (615)
T ss_pred HHHHHhhcCCCCccceEeeecCCceeEEEEeccccccccccceeEEEEeccch
Confidence 00 0000 0111123445557899999988877776666666666665554
|
|
| >PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin | Back alignment and domain information |
|---|
Probab=94.22 E-value=0.51 Score=33.39 Aligned_cols=81 Identities=12% Similarity=0.081 Sum_probs=47.1
Q ss_pred EEecCCCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCceeeceEEEEEccCCceEEEec
Q psy7433 62 VFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPHEEFFVTGA 141 (213)
Q Consensus 62 ~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~~~~l~~~~ 141 (213)
.+..++++|++...+|.+++||+.+++.+..-. .-.++...... .+. .....|..+.++.+|.-+++-
T Consensus 17 ~l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~-Si~pll~~~~~-~~~---------~~~~~i~~~~lt~~G~PiV~l- 84 (219)
T PF07569_consen 17 FLECNGSYLLAITSSGLLYVWNLKKGKAVLPPV-SIAPLLNSSPV-SDK---------SSSPNITSCSLTSNGVPIVTL- 84 (219)
T ss_pred EEEeCCCEEEEEeCCCeEEEEECCCCeeccCCc-cHHHHhccccc-ccC---------CCCCcEEEEEEcCCCCEEEEE-
Confidence 345578899999999999999999887643221 00111111000 000 222456667777777655544
Q ss_pred CCCcEEEEEccCC
Q psy7433 142 GDGDIKVWSLSGN 154 (213)
Q Consensus 142 ~dg~i~v~d~~~~ 154 (213)
.+|..+.||..-+
T Consensus 85 sng~~y~y~~~L~ 97 (219)
T PF07569_consen 85 SNGDSYSYSPDLG 97 (219)
T ss_pred eCCCEEEeccccc
Confidence 3567788876543
|
These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus |
| >PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length | Back alignment and domain information |
|---|
Probab=94.21 E-value=2.1 Score=35.29 Aligned_cols=86 Identities=13% Similarity=0.203 Sum_probs=55.6
Q ss_pred CCCccEEEEeCCCcccccceeeeeeecCCceEEEEe--cCCCEEEEEcCCCcEEEEeccC---------ceEEEec--cc
Q psy7433 29 SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFA--PQHQLLISAGKKGDICVIDLRQ---------RVIRSRF--NA 95 (213)
Q Consensus 29 s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~d~~v~iwd~~~---------~~~~~~~--~~ 95 (213)
+....+.|||.+... .+....+ ...+.|..+.|. |+++.+++.+....|.++--.. ..++..+ ..
T Consensus 48 ~~~~~LtIWD~~~~~-lE~~~~f-~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~~i~~i~i~~ 125 (631)
T PF12234_consen 48 SSRSELTIWDTRSGV-LEYEESF-SEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGPSWAPIRKIDISS 125 (631)
T ss_pred CCCCEEEEEEcCCcE-EEEeeee-cCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCcccceeEEEEeec
Confidence 456789999985321 1112222 346789999995 5888888888888999885421 1233332 22
Q ss_pred -CCCCeeEEEecCCCCEEEEec
Q psy7433 96 -HESPVKCLAIDPHEEFFVTGA 116 (213)
Q Consensus 96 -~~~~i~~~~~~~~~~~l~~~~ 116 (213)
...+|.+..|.++|..++.++
T Consensus 126 ~T~h~Igds~Wl~~G~LvV~sG 147 (631)
T PF12234_consen 126 HTPHPIGDSIWLKDGTLVVGSG 147 (631)
T ss_pred CCCCCccceeEecCCeEEEEeC
Confidence 236789999999887655544
|
This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits. |
| >PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal | Back alignment and domain information |
|---|
Probab=94.15 E-value=0.93 Score=29.16 Aligned_cols=119 Identities=18% Similarity=0.260 Sum_probs=70.1
Q ss_pred EEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCceeeceEEEEEcc--CCceE
Q psy7433 60 SLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDP--HEEFF 137 (213)
Q Consensus 60 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~--~~~~l 137 (213)
.-+|.....-|+.++.-|.|.|++.........- ...++.-+.+...=.-|+++ .|.| +...|
T Consensus 3 iGkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~--~~~~i~~LNin~~italaaG-------------~l~~~~~~D~L 67 (136)
T PF14781_consen 3 IGKFDGVHPCLACATTGGKVFIHNPHERGQRTGR--QDSDISFLNINQEITALAAG-------------RLKPDDGRDCL 67 (136)
T ss_pred EEEeCCCceeEEEEecCCEEEEECCCcccccccc--ccCceeEEECCCceEEEEEE-------------ecCCCCCcCEE
Confidence 3456666667888888899999987654322111 33445555554433333332 2332 23477
Q ss_pred EEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCC----CCeEEEEecCCcEEEEeCCCC
Q psy7433 138 VTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG----GSRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 138 ~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~l~s~~~d~~i~iw~~~~~ 205 (213)
+.|+.. .+..||+.....++.-+.+ ..++++.+-. +.-++..+.+..|.-||....
T Consensus 68 liGt~t-~llaYDV~~N~d~Fyke~~-----------DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~G~ 127 (136)
T PF14781_consen 68 LIGTQT-SLLAYDVENNSDLFYKEVP-----------DGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDYEGN 127 (136)
T ss_pred EEeccc-eEEEEEcccCchhhhhhCc-----------cceeEEEEEecCCCCCcEEEECceEEEEEeCCCCc
Confidence 777765 6889999876666555544 4677777632 233666666667777776544
|
|
| >PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex | Back alignment and domain information |
|---|
Probab=93.83 E-value=2.6 Score=33.08 Aligned_cols=57 Identities=16% Similarity=0.240 Sum_probs=42.7
Q ss_pred cCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccC-CCCeeEEEecCCCCE
Q psy7433 55 DQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAH-ESPVKCLAIDPHEEF 111 (213)
Q Consensus 55 ~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~-~~~i~~~~~~~~~~~ 111 (213)
.+++..++.||+++++|.-..+|.+.+...+-.+....+... ......+.|+-+...
T Consensus 216 ~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~dav 273 (410)
T PF04841_consen 216 DGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGNDAV 273 (410)
T ss_pred CCCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecCcCCCCcEEEEECCCcE
Confidence 367999999999999999999999988876555555555433 456678888865443
|
Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm |
| >COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=93.80 E-value=2 Score=34.32 Aligned_cols=126 Identities=12% Similarity=0.318 Sum_probs=72.5
Q ss_pred CCCEEE-EEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCC-------EEEEecCCCce-e--------------
Q psy7433 66 QHQLLI-SAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEE-------FFVTGAGDGDI-K-------------- 122 (213)
Q Consensus 66 ~~~~l~-~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-------~l~~~~~~~~i-~-------------- 122 (213)
+.++|+ .|+....++-.|++.|+.+.....+... -+.+.|..+ .-++|-.+..+ +
T Consensus 478 dssli~~dg~~~~kLykmDIErGkvveeW~~~ddv--vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~v~e 555 (776)
T COG5167 478 DSSLIYLDGGERDKLYKMDIERGKVVEEWDLKDDV--VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIKVVE 555 (776)
T ss_pred CcceEEecCCCcccceeeecccceeeeEeecCCcc--eeecCCchhHHhcCccceEEeecccceEEecccccCCceeeee
Confidence 444444 4455566777788888888777655544 466666432 12233333222 2
Q ss_pred --eceEEEEEcc----CCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCc
Q psy7433 123 --SPVKCLAIDP----HEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGS 196 (213)
Q Consensus 123 --~~v~~~~~~~----~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~ 196 (213)
.-.+.-.|+. ...++++++..|.|++||--..+....+++- +..|..+....++..+.+.....
T Consensus 556 sKdY~tKn~Fss~~tTesGyIa~as~kGDirLyDRig~rAKtalP~l----------G~aIk~idvta~Gk~ilaTCk~y 625 (776)
T COG5167 556 SKDYKTKNKFSSGMTTESGYIAAASRKGDIRLYDRIGKRAKTALPGL----------GDAIKHIDVTANGKHILATCKNY 625 (776)
T ss_pred ehhccccccccccccccCceEEEecCCCceeeehhhcchhhhcCccc----------ccceeeeEeecCCcEEEEeecce
Confidence 1112222332 2348999999999999995333333334433 26788888887665444444667
Q ss_pred EEEEeCC
Q psy7433 197 MKVRQLP 203 (213)
Q Consensus 197 i~iw~~~ 203 (213)
+-+-|++
T Consensus 626 llL~d~~ 632 (776)
T COG5167 626 LLLTDVP 632 (776)
T ss_pred EEEEecc
Confidence 7777765
|
|
| >PHA02790 Kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=93.50 E-value=3.3 Score=33.25 Aligned_cols=99 Identities=9% Similarity=0.023 Sum_probs=45.6
Q ss_pred CCCeEEEeeccC--CCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCC--CcEEEEeccCceEEEec
Q psy7433 18 SCSLVATAGHSS--ESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKK--GDICVIDLRQRVIRSRF 93 (213)
Q Consensus 18 ~~~~l~~~g~~s--~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--~~v~iwd~~~~~~~~~~ 93 (213)
++.+++.||... .-..+..||.... +...+..+.........+ .-++...+.|+.+ ..+..||..+++... +
T Consensus 271 ~~~lyviGG~~~~~~~~~v~~Ydp~~~-~W~~~~~m~~~r~~~~~v--~~~~~iYviGG~~~~~sve~ydp~~n~W~~-~ 346 (480)
T PHA02790 271 GEVVYLIGGWMNNEIHNNAIAVNYISN-NWIPIPPMNSPRLYASGV--PANNKLYVVGGLPNPTSVERWFHGDAAWVN-M 346 (480)
T ss_pred CCEEEEEcCCCCCCcCCeEEEEECCCC-EEEECCCCCchhhcceEE--EECCEEEEECCcCCCCceEEEECCCCeEEE-C
Confidence 455667775310 1135667886432 222222222222222222 2366677777753 357788876654322 1
Q ss_pred ccCCCCe-eEEEecCCCCEEEEecCCCc
Q psy7433 94 NAHESPV-KCLAIDPHEEFFVTGAGDGD 120 (213)
Q Consensus 94 ~~~~~~i-~~~~~~~~~~~l~~~~~~~~ 120 (213)
..-..+. ......-+++..+.|+.++.
T Consensus 347 ~~l~~~r~~~~~~~~~g~IYviGG~~~~ 374 (480)
T PHA02790 347 PSLLKPRCNPAVASINNVIYVIGGHSET 374 (480)
T ss_pred CCCCCCCcccEEEEECCEEEEecCcCCC
Confidence 1111111 11112225777777776543
|
|
| >PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea | Back alignment and domain information |
|---|
Probab=93.47 E-value=3 Score=32.71 Aligned_cols=137 Identities=15% Similarity=0.185 Sum_probs=68.8
Q ss_pred EEeCCCCeEEEeec---cCCCccEEEEeCCCcccccceeeeeeecC---CceEEEEecCCCEEEEEc-------------
Q psy7433 14 VFLGSCSLVATAGH---SSESKNVCLWDSLLPQKKALVQAFVCHDQ---GASSLVFAPQHQLLISAG------------- 74 (213)
Q Consensus 14 ~~~~~~~~l~~~g~---~s~~~~i~iwd~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~------------- 74 (213)
..-|+|++++++-. +...|.+.+.|- ++.+.......... --....|.|..+.+++..
T Consensus 136 Hclp~G~imIS~lGd~~G~g~Ggf~llD~---~tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~ 212 (461)
T PF05694_consen 136 HCLPDGRIMISALGDADGNGPGGFVLLDG---ETFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNP 212 (461)
T ss_dssp EE-SS--EEEEEEEETTS-S--EEEEE-T---TT--EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---T
T ss_pred eecCCccEEEEeccCCCCCCCCcEEEEcC---ccccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCCh
Confidence 33468887776521 112356777875 34555555443222 235677888888888864
Q ss_pred -------CCCcEEEEeccCceEEEecccCC--CCeeEEEecCC--CCE-EEEecCCCcee--------------------
Q psy7433 75 -------KKGDICVIDLRQRVIRSRFNAHE--SPVKCLAIDPH--EEF-FVTGAGDGDIK-------------------- 122 (213)
Q Consensus 75 -------~d~~v~iwd~~~~~~~~~~~~~~--~~i~~~~~~~~--~~~-l~~~~~~~~i~-------------------- 122 (213)
....+.+||+.+.+.++.+.-.. .....+.|..+ ..+ |+.+....+|.
T Consensus 213 ~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~ 292 (461)
T PF05694_consen 213 EDLEAGKYGHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPA 292 (461)
T ss_dssp TTHHHH-S--EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--
T ss_pred hHhhcccccCeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCC
Confidence 23579999999999998886432 23456666543 332 33332333321
Q ss_pred -------------------eceEEEEEccCCceEEEec-CCCcEEEEEccC
Q psy7433 123 -------------------SPVKCLAIDPHEEFFVTGA-GDGDIKVWSLSG 153 (213)
Q Consensus 123 -------------------~~v~~~~~~~~~~~l~~~~-~dg~i~v~d~~~ 153 (213)
.-|+.+.+|.|.++|..++ ..|.|+.||+..
T Consensus 293 ~~v~~~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISD 343 (461)
T PF05694_consen 293 KKVEGWILPEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDISD 343 (461)
T ss_dssp EE--SS---GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-SS
T ss_pred cccCcccccccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecCC
Confidence 2368899999999877665 579999999964
|
The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A. |
| >COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.42 E-value=0.17 Score=39.37 Aligned_cols=148 Identities=16% Similarity=0.239 Sum_probs=80.5
Q ss_pred ceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEE-Eec-ccCCC----Cee-EEEecCCCCEEEEecCCC
Q psy7433 47 LVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIR-SRF-NAHES----PVK-CLAIDPHEEFFVTGAGDG 119 (213)
Q Consensus 47 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~-~~~-~~~~~----~i~-~~~~~~~~~~l~~~~~~~ 119 (213)
.++.+......+..+-..|+|+.++.-+. .++.++++.+.... +++ ....+ .|+ .+....-+..+++++.||
T Consensus 212 ~i~~L~~~~~~v~qllL~Pdg~~LYv~~g-~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg~SLLv~~~dG 290 (733)
T COG4590 212 IIRLLSVPFSDVSQLLLTPDGKTLYVRTG-SELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLSGGFSLLVVHEDG 290 (733)
T ss_pred hhhhcCCCccchHhhEECCCCCEEEEecC-CeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHhCceeEEEEcCCC
Confidence 33334445567888889999998887765 68888888654221 111 11111 122 222233455677777777
Q ss_pred cee-------------eceEEEEEccCCc----------eEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCC
Q psy7433 120 DIK-------------SPVKCLAIDPHEE----------FFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQG 176 (213)
Q Consensus 120 ~i~-------------~~v~~~~~~~~~~----------~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (213)
.+. ..+....+.|... -+++-+.+|++.++.....+.+..- ..-..
T Consensus 291 ~vsQWFdvr~~~~p~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL~~-----------~~~~~ 359 (733)
T COG4590 291 LVSQWFDVRRDGQPHLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLLFE-----------RAYQA 359 (733)
T ss_pred ceeeeeeeecCCCCcceeeeccccCcccceeeccccccceEEEEcCCCceeeeecccCcceehh-----------hhhcC
Confidence 664 4455555554332 3444444455544433222211111 11135
Q ss_pred eEEEEeCCCC-eEEEEecCCcEEEEeCCCCcc
Q psy7433 177 VTQLHVDGGS-RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 177 v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~ 207 (213)
+.-++++|.+ ++++ -..|.++++.+++...
T Consensus 360 ~~~~~~Sp~~~~Ll~-e~~gki~~~~l~Nr~P 390 (733)
T COG4590 360 PQLVAMSPNQAYLLS-EDQGKIRLAQLENRNP 390 (733)
T ss_pred cceeeeCcccchhee-ecCCceEEEEecCCCC
Confidence 6678889854 4544 4667899999987654
|
|
| >COG5290 IkappaB kinase complex, IKAP component [Transcription] | Back alignment and domain information |
|---|
Probab=93.28 E-value=3.3 Score=35.00 Aligned_cols=57 Identities=14% Similarity=0.147 Sum_probs=35.1
Q ss_pred CeeEEEecCCCCEEEEecCCCcee------------------------eceEEEEEccCCceEEEecCCCcEEEEEccCC
Q psy7433 99 PVKCLAIDPHEEFFVTGAGDGDIK------------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGN 154 (213)
Q Consensus 99 ~i~~~~~~~~~~~l~~~~~~~~i~------------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~ 154 (213)
.-..++|-|+|..+++-..|+.-. .....++|+-....++.+ ..+.+.+|-.++.
T Consensus 248 ~e~~LSWkpqgS~~ati~td~~~~S~~ViFfErNGLrHGef~lr~~~dEk~~~~~wn~~s~vlav~-~~n~~~lwttkNy 326 (1243)
T COG5290 248 MEHQLSWKPQGSKYATIGTDGCSTSESVIFFERNGLRHGEFDLRVGCDEKAFLENWNLLSTVLAVA-EGNLLKLWTTKNY 326 (1243)
T ss_pred chhccccccCCceeeeeccCCCCCcceEEEEccCCcccCCccccCCchhhhhhhhhhHHHHHHHHh-hcceEEEEEccce
Confidence 345689999999999988665432 233444554444434333 3457888877655
Q ss_pred ee
Q psy7433 155 HL 156 (213)
Q Consensus 155 ~~ 156 (213)
.-
T Consensus 327 hW 328 (1243)
T COG5290 327 HW 328 (1243)
T ss_pred EE
Confidence 43
|
|
| >TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat | Back alignment and domain information |
|---|
Probab=93.16 E-value=0.52 Score=23.09 Aligned_cols=40 Identities=15% Similarity=0.154 Sum_probs=26.6
Q ss_pred cCCCEEEEEc-CCCcEEEEeccCceEEEecccCCCCeeEEEe
Q psy7433 65 PQHQLLISAG-KKGDICVIDLRQRVIRSRFNAHESPVKCLAI 105 (213)
Q Consensus 65 ~~~~~l~~~~-~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~ 105 (213)
|++++|+++. .++.|.++|..+++.+..+.. ......+.+
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~v-g~~P~~i~~ 41 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPV-GGYPFGVAV 41 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEEC-CCCCceEEe
Confidence 4666666554 578999999998888777764 233334443
|
This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400). |
| >PRK13684 Ycf48-like protein; Provisional | Back alignment and domain information |
|---|
Probab=93.12 E-value=3 Score=31.70 Aligned_cols=136 Identities=13% Similarity=0.175 Sum_probs=75.9
Q ss_pred cCCceEEEEecCCCEEEEEcCCCcEEE-EeccCce-EEEecccCCCCeeEEEecCCCCEEEEecCCCcee----------
Q psy7433 55 DQGASSLVFAPQHQLLISAGKKGDICV-IDLRQRV-IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK---------- 122 (213)
Q Consensus 55 ~~~v~~~~~~~~~~~l~~~~~d~~v~i-wd~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~---------- 122 (213)
...+..+.+.|++.+++++ ..|.+.. +|- .++ -..........+..+.+.++++.++++. .|.+.
T Consensus 172 ~g~~~~i~~~~~g~~v~~g-~~G~i~~s~~~-gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg~-~G~~~~~s~d~G~sW 248 (334)
T PRK13684 172 AGVVRNLRRSPDGKYVAVS-SRGNFYSTWEP-GQTAWTPHQRNSSRRLQSMGFQPDGNLWMLAR-GGQIRFNDPDDLESW 248 (334)
T ss_pred cceEEEEEECCCCeEEEEe-CCceEEEEcCC-CCCeEEEeeCCCcccceeeeEcCCCCEEEEec-CCEEEEccCCCCCcc
Confidence 3567888999988766655 4455543 221 122 1122223456788888888887655433 23321
Q ss_pred -----------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEE
Q psy7433 123 -----------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSC 191 (213)
Q Consensus 123 -----------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~ 191 (213)
..+..+.+.|+++.++++ .+|.+. .....++.-......... ....+.+.+.+++..+..
T Consensus 249 ~~~~~~~~~~~~~l~~v~~~~~~~~~~~G-~~G~v~-~S~d~G~tW~~~~~~~~~-------~~~~~~~~~~~~~~~~~~ 319 (334)
T PRK13684 249 SKPIIPEITNGYGYLDLAYRTPGEIWAGG-GNGTLL-VSKDGGKTWEKDPVGEEV-------PSNFYKIVFLDPEKGFVL 319 (334)
T ss_pred ccccCCccccccceeeEEEcCCCCEEEEc-CCCeEE-EeCCCCCCCeECCcCCCC-------CcceEEEEEeCCCceEEE
Confidence 225678888877755554 566553 333333333333211100 135777777766666667
Q ss_pred ecCCcEEEEeC
Q psy7433 192 GADGSMKVRQL 202 (213)
Q Consensus 192 ~~d~~i~iw~~ 202 (213)
+..|.|--|+=
T Consensus 320 G~~G~il~~~~ 330 (334)
T PRK13684 320 GQRGVLLRYVG 330 (334)
T ss_pred CCCceEEEecC
Confidence 78888877753
|
|
| >COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=93.10 E-value=1.3 Score=35.37 Aligned_cols=53 Identities=13% Similarity=0.249 Sum_probs=42.4
Q ss_pred CCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCC
Q psy7433 67 HQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDG 119 (213)
Q Consensus 67 ~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~ 119 (213)
+.++++++..|-|++||.-.-+....+++....|..+..+.+|+++++.+..-
T Consensus 573 sGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk~y 625 (776)
T COG5167 573 SGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCKNY 625 (776)
T ss_pred CceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeecce
Confidence 34899999999999999765555566777788899999999999877766554
|
|
| >COG5276 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=93.09 E-value=2.7 Score=31.11 Aligned_cols=133 Identities=12% Similarity=0.193 Sum_probs=74.8
Q ss_pred cCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEeccc--CCCCeeEEEecCCCCEEEEec-CCCcee-------ec
Q psy7433 55 DQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNA--HESPVKCLAIDPHEEFFVTGA-GDGDIK-------SP 124 (213)
Q Consensus 55 ~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~-~~~~i~-------~~ 124 (213)
.+-+..+.++. ++.+.+..+.-+++.|+.+......+.. ..+-..++..+ |++..++. .++.+. .+
T Consensus 86 ~~l~~Dv~vse--~yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~gyaygv~vs--Gn~aYVadlddgfLivdvsdpssP 161 (370)
T COG5276 86 RDLFADVRVSE--EYVYVADWSSGLRIVDISTPDSPTLIGFLNTDGYAYGVYVS--GNYAYVADLDDGFLIVDVSDPSSP 161 (370)
T ss_pred hhhhheeEecc--cEEEEEcCCCceEEEeccCCCCcceeccccCCceEEEEEec--CCEEEEeeccCcEEEEECCCCCCc
Confidence 45567777764 4777777888899999987643322221 22334455544 66666666 444443 11
Q ss_pred ------------eEEEEEccCCceEEEecCCCcEEEEEccCCee---eeeecCCCCceeEEEecCCCeEEEEeCCCCeEE
Q psy7433 125 ------------VKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHL---LYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLF 189 (213)
Q Consensus 125 ------------v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~ 189 (213)
-..++.| |++-..+..|+-+.+-|+..... +..... +..+.++..+++.-++
T Consensus 162 ~lagrya~~~~d~~~v~IS--Gn~AYvA~~d~GL~ivDVSnp~sPvli~~~n~-----------g~g~~sv~vsdnr~y~ 228 (370)
T COG5276 162 QLAGRYALPGGDTHDVAIS--GNYAYVAWRDGGLTIVDVSNPHSPVLIGSYNT-----------GPGTYSVSVSDNRAYL 228 (370)
T ss_pred eeeeeeccCCCCceeEEEe--cCeEEEEEeCCCeEEEEccCCCCCeEEEEEec-----------CCceEEEEecCCeeEE
Confidence 1233333 66666677788888888864332 222221 2368888888765444
Q ss_pred EEecCCcEEEEeCCCC
Q psy7433 190 SCGADGSMKVRQLPDR 205 (213)
Q Consensus 190 s~~~d~~i~iw~~~~~ 205 (213)
+....| +.+-|..+.
T Consensus 229 vvy~eg-vlivd~s~~ 243 (370)
T COG5276 229 VVYDEG-VLIVDVSGP 243 (370)
T ss_pred EEcccc-eEEEecCCC
Confidence 443333 444454443
|
|
| >PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []) | Back alignment and domain information |
|---|
Probab=92.79 E-value=2 Score=29.17 Aligned_cols=30 Identities=13% Similarity=0.122 Sum_probs=24.7
Q ss_pred CCeEEEEeCCCC-------eEEEEecCCcEEEEeCCC
Q psy7433 175 QGVTQLHVDGGS-------RLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 175 ~~v~~~~~~~~~-------~l~s~~~d~~i~iw~~~~ 204 (213)
..+..++|+|.+ .|++...++.|.||.-..
T Consensus 86 ~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~ 122 (173)
T PF12657_consen 86 SQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG 122 (173)
T ss_pred ccEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence 379999999932 388999999999998764
|
The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 []. |
| >PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates | Back alignment and domain information |
|---|
Probab=92.38 E-value=0.78 Score=37.35 Aligned_cols=38 Identities=13% Similarity=0.212 Sum_probs=28.5
Q ss_pred CceEEEEec----CCCEEEEEcCCCcEEEEeccCceEEEecc
Q psy7433 57 GASSLVFAP----QHQLLISAGKKGDICVIDLRQRVIRSRFN 94 (213)
Q Consensus 57 ~v~~~~~~~----~~~~l~~~~~d~~v~iwd~~~~~~~~~~~ 94 (213)
.+..++.++ +..+|++.+.|+.+++||+.+++++....
T Consensus 216 ~~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~~~~~~~~ 257 (547)
T PF11715_consen 216 VAASLAVSSSEINDDTFLFTLSRDHTLRIWSLETGQCLATID 257 (547)
T ss_dssp -EEEEEE-----ETTTEEEEEETTSEEEEEETTTTCEEEEEE
T ss_pred ccceEEEecceeCCCCEEEEEeCCCeEEEEECCCCeEEEEec
Confidence 345566665 66799999999999999999998866543
|
The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A. |
| >KOG1900|consensus | Back alignment and domain information |
|---|
Probab=92.36 E-value=6.6 Score=35.09 Aligned_cols=120 Identities=13% Similarity=0.330 Sum_probs=75.1
Q ss_pred CCccEEEEeCCCcccccceeeeeeecCCceEEEE--------ecCCCEEEEEcCCCcEEEEeccC----ceE-----EEe
Q psy7433 30 ESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVF--------APQHQLLISAGKKGDICVIDLRQ----RVI-----RSR 92 (213)
Q Consensus 30 ~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~--------~~~~~~l~~~~~d~~v~iwd~~~----~~~-----~~~ 92 (213)
.|..+.+|+.++ ......+.+-...|..+.. .|.=++++....--.|.++-+.- +.. ..+
T Consensus 97 iDn~L~lWny~~---~~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~~~~~~~~~f~~~~~ 173 (1311)
T KOG1900|consen 97 IDNNLFLWNYES---DNELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFDEFTGELSIFNTSFK 173 (1311)
T ss_pred eCCeEEEEEcCC---CCccccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEeccccCccccccccee
Confidence 489999999954 3333333333444444432 23333444444445566664421 111 122
Q ss_pred cccCCCCeeEEEecCCCCEEEEecCCCcee----------------------------------------eceEEEEEcc
Q psy7433 93 FNAHESPVKCLAIDPHEEFFVTGAGDGDIK----------------------------------------SPVKCLAIDP 132 (213)
Q Consensus 93 ~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------------------------------~~v~~~~~~~ 132 (213)
+......|.|+....+|+.|.+|-.+ .+. .+|..+..+.
T Consensus 174 i~~dg~~V~~I~~t~nGRIF~~G~dg-~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~dpI~qi~ID~ 252 (1311)
T KOG1900|consen 174 ISVDGVSVNCITYTENGRIFFAGRDG-NLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSSKDPIRQITIDN 252 (1311)
T ss_pred eecCCceEEEEEeccCCcEEEeecCC-CEEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCCCCCcceeeEecc
Confidence 23345678899988888877766554 543 4788888888
Q ss_pred CCceEEEecCCCcEEEEEccC
Q psy7433 133 HEEFFVTGAGDGDIKVWSLSG 153 (213)
Q Consensus 133 ~~~~l~~~~~dg~i~v~d~~~ 153 (213)
....+.+=++.|+|.+||+..
T Consensus 253 SR~IlY~lsek~~v~~Y~i~~ 273 (1311)
T KOG1900|consen 253 SRNILYVLSEKGTVSAYDIGG 273 (1311)
T ss_pred ccceeeeeccCceEEEEEccC
Confidence 888999999999999999964
|
|
| >PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I [] | Back alignment and domain information |
|---|
Probab=92.16 E-value=3.3 Score=35.43 Aligned_cols=97 Identities=13% Similarity=0.113 Sum_probs=61.3
Q ss_pred CceEEEEEeC-CCCeEEEeeccCCCccEEEEeCCC--cccccceeeeeeec----------CCceEEEEecCCCEEEEEc
Q psy7433 8 KITSDFVFLG-SCSLVATAGHSSESKNVCLWDSLL--PQKKALVQAFVCHD----------QGASSLVFAPQHQLLISAG 74 (213)
Q Consensus 8 ~~v~~~~~~~-~~~~l~~~g~~s~~~~i~iwd~~~--~~~~~~~~~~~~~~----------~~v~~~~~~~~~~~l~~~~ 74 (213)
.+.-+++|+| +...||.. +..|.-.||++.. ......+.....+. ..-..+.|.++.+.|+.++
T Consensus 146 ~~~aDv~FnP~~~~q~AiV---D~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~~ 222 (765)
T PF10214_consen 146 FPHADVAFNPWDQRQFAIV---DEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVCN 222 (765)
T ss_pred CccceEEeccCccceEEEE---eccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEEEEEc
Confidence 4677899999 56689999 7899999999921 11111111111111 2234788988888888886
Q ss_pred CCCcEEEEeccCceEEE-e-cccCCCCeeEEEecCC
Q psy7433 75 KKGDICVIDLRQRVIRS-R-FNAHESPVKCLAIDPH 108 (213)
Q Consensus 75 ~d~~v~iwd~~~~~~~~-~-~~~~~~~i~~~~~~~~ 108 (213)
. ..+.++|+++..... . .......|..+.-+|.
T Consensus 223 r-~~l~~~d~~~~~~~~~l~~~~~~~~IlDv~~~~~ 257 (765)
T PF10214_consen 223 R-SKLMLIDFESNWQTEYLVTAKTWSWILDVKRSPD 257 (765)
T ss_pred C-CceEEEECCCCCccchhccCCChhheeeEEecCC
Confidence 5 578899998775422 1 1224456777777665
|
These proteins are found in fungi. |
| >KOG1900|consensus | Back alignment and domain information |
|---|
Probab=92.14 E-value=3.5 Score=36.64 Aligned_cols=80 Identities=11% Similarity=0.231 Sum_probs=47.5
Q ss_pred eceEEEEEccCCceEEEecCCCcEEEEEcc--CC-----eeeeeecCCC-------CceeEE-EecCCCeEEEEeCCC-C
Q psy7433 123 SPVKCLAIDPHEEFFVTGAGDGDIKVWSLS--GN-----HLLYNFPGEH-------ARSSFF-KHIGQGVTQLHVDGG-S 186 (213)
Q Consensus 123 ~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~--~~-----~~~~~~~~~~-------~~~~~~-~~~~~~v~~~~~~~~-~ 186 (213)
..|.|+....+|+.+++|-.+ .+|.+. .. +....+.... .....+ ..+..+|..+..+.. +
T Consensus 179 ~~V~~I~~t~nGRIF~~G~dg---~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~dpI~qi~ID~SR~ 255 (1311)
T KOG1900|consen 179 VSVNCITYTENGRIFFAGRDG---NLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSSKDPIRQITIDNSRN 255 (1311)
T ss_pred ceEEEEEeccCCcEEEeecCC---CEEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCCCCCcceeeEeccccc
Confidence 567888888888877776544 355442 11 1000000000 000001 122468999999864 4
Q ss_pred eEEEEecCCcEEEEeCCCC
Q psy7433 187 RLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 187 ~l~s~~~d~~i~iw~~~~~ 205 (213)
.+.+-+..|.|.+|++...
T Consensus 256 IlY~lsek~~v~~Y~i~~~ 274 (1311)
T KOG1900|consen 256 ILYVLSEKGTVSAYDIGGN 274 (1311)
T ss_pred eeeeeccCceEEEEEccCC
Confidence 5889999999999999874
|
|
| >PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes | Back alignment and domain information |
|---|
Probab=91.76 E-value=3.7 Score=29.60 Aligned_cols=101 Identities=13% Similarity=0.196 Sum_probs=60.1
Q ss_pred EEEEecCCCEEEEEcCC---CcEEEEeccC----ceEEEecc--cCCCCeeEEEecCCCCEEEEecCCCcee--------
Q psy7433 60 SLVFAPQHQLLISAGKK---GDICVIDLRQ----RVIRSRFN--AHESPVKCLAIDPHEEFFVTGAGDGDIK-------- 122 (213)
Q Consensus 60 ~~~~~~~~~~l~~~~~d---~~v~iwd~~~----~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~~~~i~-------- 122 (213)
+-.+.+||++|.+|+.. ..+++++..+ ......-. .....-......|||+.|+.|+...-..
T Consensus 71 gg~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~~~RWYpT~~~L~DG~vlIvGG~~~~t~E~~P~~~~ 150 (243)
T PF07250_consen 71 GGAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQSGRWYPTATTLPDGRVLIVGGSNNPTYEFWPPKGP 150 (243)
T ss_pred CcCCCCCCCEEEeCCCCccccceEEEecCCCCCCCCceECcccccCCCccccceECCCCCEEEEeCcCCCcccccCCccC
Confidence 34567899999888752 3477777543 11111000 1122233556678999999998875332
Q ss_pred -------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecC
Q psy7433 123 -------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPG 162 (213)
Q Consensus 123 -------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~ 162 (213)
.----+-..|+|++++.+..+. .+||..+.+.+..+..
T Consensus 151 ~~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~~s--~i~d~~~n~v~~~lP~ 207 (243)
T PF07250_consen 151 GPGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANRGS--IIYDYKTNTVVRTLPD 207 (243)
T ss_pred CCCceeeecchhhhccCccccCceEEEcCCCCEEEEEcCCc--EEEeCCCCeEEeeCCC
Confidence 0011244567899888887654 4678887776666554
|
Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium []. |
| >COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=91.70 E-value=3.4 Score=29.01 Aligned_cols=166 Identities=11% Similarity=0.029 Sum_probs=83.8
Q ss_pred CCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEE-EcCCCcEEEEeccCceEEEecccC
Q psy7433 18 SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLIS-AGKKGDICVIDLRQRVIRSRFNAH 96 (213)
Q Consensus 18 ~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~v~iwd~~~~~~~~~~~~~ 96 (213)
+|.++.+.|. -....|++||+ ..++.+.+.+-....+..--...-++++.. .=.+|.-..+|.++.+.+..+. .
T Consensus 55 ~g~i~esTG~-yg~S~ir~~~L---~~gq~~~s~~l~~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg~~~-y 129 (262)
T COG3823 55 DGHILESTGL-YGFSKIRVSDL---TTGQEIFSEKLAPDTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEELGRFS-Y 129 (262)
T ss_pred CCEEEEeccc-cccceeEEEec---cCceEEEEeecCCccccccceeeccceEEEEEeccceeEEEChHHhhhhcccc-c
Confidence 4567777754 34567999999 444444433211111111111111223322 2257888889998887777665 3
Q ss_pred CCCeeEEEecCCCCEEEEecCCCcee----------------------eceEEEEEccCCceEEEecCCCcEEEEEccCC
Q psy7433 97 ESPVKCLAIDPHEEFFVTGAGDGDIK----------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGN 154 (213)
Q Consensus 97 ~~~i~~~~~~~~~~~l~~~~~~~~i~----------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~ 154 (213)
.+.-+.++.. ++.|+.+.....+. ..++.+.|- +|...+-.=.+..|...|..++
T Consensus 130 ~GeGWgLt~d--~~~LimsdGsatL~frdP~tfa~~~~v~VT~~g~pv~~LNELE~V-dG~lyANVw~t~~I~rI~p~sG 206 (262)
T COG3823 130 EGEGWGLTSD--DKNLIMSDGSATLQFRDPKTFAELDTVQVTDDGVPVSKLNELEWV-DGELYANVWQTTRIARIDPDSG 206 (262)
T ss_pred CCcceeeecC--CcceEeeCCceEEEecCHHHhhhcceEEEEECCeecccccceeee-ccEEEEeeeeecceEEEcCCCC
Confidence 4444555543 34455544444443 122222222 3444554445555666666777
Q ss_pred eeeeeecCCCCce--eEEEecCCCeEEEEeCCCC-e-EEEE
Q psy7433 155 HLLYNFPGEHARS--SFFKHIGQGVTQLHVDGGS-R-LFSC 191 (213)
Q Consensus 155 ~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~-~-l~s~ 191 (213)
+...-+....... .....+....+.+++.|++ + +++|
T Consensus 207 rV~~widlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~iTG 247 (262)
T COG3823 207 RVVAWIDLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLITG 247 (262)
T ss_pred cEEEEEEccCCchhcCccccccccccceeecCcCCeEEEec
Confidence 7665554332111 1111223567888998843 5 4554
|
|
| >TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family | Back alignment and domain information |
|---|
Probab=91.59 E-value=6.5 Score=32.05 Aligned_cols=30 Identities=13% Similarity=0.217 Sum_probs=24.0
Q ss_pred EEccCCc---eEEEecCCCcEEEEEccCCeeee
Q psy7433 129 AIDPHEE---FFVTGAGDGDIKVWSLSGNHLLY 158 (213)
Q Consensus 129 ~~~~~~~---~l~~~~~dg~i~v~d~~~~~~~~ 158 (213)
.+..+|+ .++.+..+|.+.+.|-++++.+.
T Consensus 307 d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i~ 339 (527)
T TIGR03075 307 DLKKDGKPRKLLAHADRNGFFYVLDRTNGKLLS 339 (527)
T ss_pred EeccCCcEEEEEEEeCCCceEEEEECCCCceec
Confidence 3334665 78899999999999999998863
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens. |
| >TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat | Back alignment and domain information |
|---|
Probab=91.36 E-value=0.97 Score=22.08 Aligned_cols=32 Identities=16% Similarity=0.279 Sum_probs=23.6
Q ss_pred cCCceEEEec-CCCcEEEEEccCCeeeeeecCC
Q psy7433 132 PHEEFFVTGA-GDGDIKVWSLSGNHLLYNFPGE 163 (213)
Q Consensus 132 ~~~~~l~~~~-~dg~i~v~d~~~~~~~~~~~~~ 163 (213)
|++++|.++. .++.|.++|..+++.+..+...
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~vg 33 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPVG 33 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEECC
Confidence 5667555554 5789999999888887777663
|
This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400). |
| >PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates | Back alignment and domain information |
|---|
Probab=91.06 E-value=2.4 Score=34.60 Aligned_cols=39 Identities=23% Similarity=0.415 Sum_probs=29.0
Q ss_pred ceEEEEEcc----CCceEEEecCCCcEEEEEccCCeeeeeecC
Q psy7433 124 PVKCLAIDP----HEEFFVTGAGDGDIKVWSLSGNHLLYNFPG 162 (213)
Q Consensus 124 ~v~~~~~~~----~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~ 162 (213)
....+++++ +..++++-+.|+.+++||+.++.++.+...
T Consensus 216 ~~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~~~~~~~~~ 258 (547)
T PF11715_consen 216 VAASLAVSSSEINDDTFLFTLSRDHTLRIWSLETGQCLATIDL 258 (547)
T ss_dssp -EEEEEE-----ETTTEEEEEETTSEEEEEETTTTCEEEEEET
T ss_pred ccceEEEecceeCCCCEEEEEeCCCeEEEEECCCCeEEEEecc
Confidence 345566666 567999999999999999999998666533
|
The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A. |
| >PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes [] | Back alignment and domain information |
|---|
Probab=90.91 E-value=1.9 Score=36.08 Aligned_cols=75 Identities=12% Similarity=0.198 Sum_probs=52.8
Q ss_pred cCceEEEEEe--CCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCC---C---EEEEEcCCCc
Q psy7433 7 NKITSDFVFL--GSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQH---Q---LLISAGKKGD 78 (213)
Q Consensus 7 ~~~v~~~~~~--~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~---~l~~~~~d~~ 78 (213)
...++.++++ ...++||++ ++...|.||-............-..+...|.++.|.++. . .+++++-.|.
T Consensus 163 ~~SaWGLdIh~~~~~rlIAVS---sNs~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~ 239 (717)
T PF08728_consen 163 GASAWGLDIHDYKKSRLIAVS---SNSQEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGE 239 (717)
T ss_pred CCceeEEEEEecCcceEEEEe---cCCceEEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCc
Confidence 4578999998 888899998 788888888663211111111111266789999997633 2 7888999999
Q ss_pred EEEEec
Q psy7433 79 ICVIDL 84 (213)
Q Consensus 79 v~iwd~ 84 (213)
+.+|++
T Consensus 240 v~~~~I 245 (717)
T PF08728_consen 240 VWTFKI 245 (717)
T ss_pred EEEEEE
Confidence 999888
|
RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance []. |
| >PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=90.81 E-value=0.84 Score=20.39 Aligned_cols=25 Identities=20% Similarity=0.530 Sum_probs=17.1
Q ss_pred eEEEEEccCCceEEEecCCCcEEEE
Q psy7433 125 VKCLAIDPHEEFFVTGAGDGDIKVW 149 (213)
Q Consensus 125 v~~~~~~~~~~~l~~~~~dg~i~v~ 149 (213)
+..++++++|+++++=+.+++|.+|
T Consensus 4 P~gvav~~~g~i~VaD~~n~rV~vf 28 (28)
T PF01436_consen 4 PHGVAVDSDGNIYVADSGNHRVQVF 28 (28)
T ss_dssp EEEEEEETTSEEEEEECCCTEEEEE
T ss_pred CcEEEEeCCCCEEEEECCCCEEEEC
Confidence 4567777777777776666766654
|
For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A. |
| >PHA02713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=90.24 E-value=9.2 Score=31.45 Aligned_cols=54 Identities=9% Similarity=0.288 Sum_probs=28.5
Q ss_pred CCCEEEEEcCC------CcEEEEeccCceEEEecccCCCC-eeEEEecCCCCEEEEecCCCc
Q psy7433 66 QHQLLISAGKK------GDICVIDLRQRVIRSRFNAHESP-VKCLAIDPHEEFFVTGAGDGD 120 (213)
Q Consensus 66 ~~~~l~~~~~d------~~v~iwd~~~~~~~~~~~~~~~~-i~~~~~~~~~~~l~~~~~~~~ 120 (213)
++.+.+.||.+ ..+..||..+..... +.....+ .......-+++..+.|+.++.
T Consensus 303 ~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~-~~~m~~~R~~~~~~~~~g~IYviGG~~~~ 363 (557)
T PHA02713 303 DNEIIIAGGYNFNNPSLNKVYKINIENKIHVE-LPPMIKNRCRFSLAVIDDTIYAIGGQNGT 363 (557)
T ss_pred CCEEEEEcCCCCCCCccceEEEEECCCCeEee-CCCCcchhhceeEEEECCEEEEECCcCCC
Confidence 66677777753 347788887764322 2211111 111112225778888887653
|
|
| >PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=90.22 E-value=1.2 Score=21.43 Aligned_cols=29 Identities=10% Similarity=0.263 Sum_probs=18.6
Q ss_pred ecCCceEEEEecCCCEEEEEc-CC--CcEEEE
Q psy7433 54 HDQGASSLVFAPQHQLLISAG-KK--GDICVI 82 (213)
Q Consensus 54 ~~~~v~~~~~~~~~~~l~~~~-~d--~~v~iw 82 (213)
....-....|+|||+.|+-++ .+ |.-.||
T Consensus 7 ~~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 7 SPGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp SSSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred CCccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 344567889999998877654 34 555554
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A .... |
| >PRK13684 Ycf48-like protein; Provisional | Back alignment and domain information |
|---|
Probab=90.00 E-value=7 Score=29.73 Aligned_cols=66 Identities=9% Similarity=0.211 Sum_probs=37.1
Q ss_pred eceEEEEEccCCceEEEecCCCcEEEEEccCC-eeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEE
Q psy7433 123 SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGN-HLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKV 199 (213)
Q Consensus 123 ~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~i 199 (213)
..+..+.+.|++.+++++. .|.+.. ....+ +.-....... ...++++.+.+++.++..+..|.+++
T Consensus 173 g~~~~i~~~~~g~~v~~g~-~G~i~~-s~~~gg~tW~~~~~~~---------~~~l~~i~~~~~g~~~~vg~~G~~~~ 239 (334)
T PRK13684 173 GVVRNLRRSPDGKYVAVSS-RGNFYS-TWEPGQTAWTPHQRNS---------SRRLQSMGFQPDGNLWMLARGGQIRF 239 (334)
T ss_pred ceEEEEEECCCCeEEEEeC-CceEEE-EcCCCCCeEEEeeCCC---------cccceeeeEcCCCCEEEEecCCEEEE
Confidence 5678889999887665554 454432 11112 2222222221 15688888888776555566666543
|
|
| >PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases | Back alignment and domain information |
|---|
Probab=89.69 E-value=7.4 Score=29.55 Aligned_cols=50 Identities=24% Similarity=0.481 Sum_probs=32.9
Q ss_pred CceEEEEecCCCEEEEEcCCCcEEEEeccCceE---EEec----ccCCCCeeEEEecCC
Q psy7433 57 GASSLVFAPQHQLLISAGKKGDICVIDLRQRVI---RSRF----NAHESPVKCLAIDPH 108 (213)
Q Consensus 57 ~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~---~~~~----~~~~~~i~~~~~~~~ 108 (213)
..+.|+|.|+++.+++ ...|.|.+++ ..+.. +..+ .........++++|+
T Consensus 3 ~P~~~a~~pdG~l~v~-e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~ 59 (331)
T PF07995_consen 3 NPRSMAFLPDGRLLVA-ERSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPD 59 (331)
T ss_dssp SEEEEEEETTSCEEEE-ETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TT
T ss_pred CceEEEEeCCCcEEEE-eCCceEEEEe-CCCcCcceecccccccccccCCcccceeccc
Confidence 3578999999877665 4589999999 44432 2222 123446789999994
|
The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B .... |
| >PHA02790 Kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=89.22 E-value=10 Score=30.51 Aligned_cols=68 Identities=7% Similarity=0.012 Sum_probs=35.1
Q ss_pred CCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCC---cEEEEeccCceE
Q psy7433 18 SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKG---DICVIDLRQRVI 89 (213)
Q Consensus 18 ~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---~v~iwd~~~~~~ 89 (213)
++.+.+.||. .....+..||.... +...+..+.........+ .-++++.+.|+.++ .+..||.++.+-
T Consensus 318 ~~~iYviGG~-~~~~sve~ydp~~n-~W~~~~~l~~~r~~~~~~--~~~g~IYviGG~~~~~~~ve~ydp~~~~W 388 (480)
T PHA02790 318 NNKLYVVGGL-PNPTSVERWFHGDA-AWVNMPSLLKPRCNPAVA--SINNVIYVIGGHSETDTTTEYLLPNHDQW 388 (480)
T ss_pred CCEEEEECCc-CCCCceEEEECCCC-eEEECCCCCCCCcccEEE--EECCEEEEecCcCCCCccEEEEeCCCCEE
Confidence 5667777763 12356788886321 222222222111111222 23677777777543 466788876643
|
|
| >TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family | Back alignment and domain information |
|---|
Probab=89.18 E-value=13 Score=31.83 Aligned_cols=25 Identities=16% Similarity=0.149 Sum_probs=21.8
Q ss_pred eEEEecCCCcEEEEEccCCeeeeee
Q psy7433 136 FFVTGAGDGDIKVWSLSGNHLLYNF 160 (213)
Q Consensus 136 ~l~~~~~dg~i~v~d~~~~~~~~~~ 160 (213)
.++.++.+|.+.++|-++++.+...
T Consensus 461 ~v~~~~K~G~~~vlDr~tG~~l~~~ 485 (764)
T TIGR03074 461 ALVAPTKQGQIYVLDRRTGEPIVPV 485 (764)
T ss_pred EEEEECCCCEEEEEECCCCCEEeec
Confidence 7889999999999999999877654
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases. |
| >TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family | Back alignment and domain information |
|---|
Probab=89.03 E-value=10 Score=30.25 Aligned_cols=57 Identities=11% Similarity=0.086 Sum_probs=37.3
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeee-----eecCCceEEEEecCC
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV-----CHDQGASSLVFAPQH 67 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~ 67 (213)
-...+.|+|.|+|++|++- ...|.|++++..... ...+..+. ........++++|+-
T Consensus 29 L~~Pw~maflPDG~llVtE---R~~G~I~~v~~~~~~-~~~~~~l~~v~~~~ge~GLlglal~PdF 90 (454)
T TIGR03606 29 LNKPWALLWGPDNQLWVTE---RATGKILRVNPETGE-VKVVFTLPEIVNDAQHNGLLGLALHPDF 90 (454)
T ss_pred CCCceEEEEcCCCeEEEEE---ecCCEEEEEeCCCCc-eeeeecCCceeccCCCCceeeEEECCCc
Confidence 3567899999999999987 236999999753211 11111111 124668899999874
|
PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis. |
| >TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family | Back alignment and domain information |
|---|
Probab=88.62 E-value=15 Score=31.59 Aligned_cols=28 Identities=11% Similarity=0.195 Sum_probs=23.2
Q ss_pred CCEEEEEcCCCcEEEEeccCceEEEecc
Q psy7433 67 HQLLISAGKKGDICVIDLRQRVIRSRFN 94 (213)
Q Consensus 67 ~~~l~~~~~d~~v~iwd~~~~~~~~~~~ 94 (213)
+.+++.++.|+.+.-.|.++|+.+..+.
T Consensus 260 ~~rV~~~T~Dg~LiALDA~TGk~~W~fg 287 (764)
T TIGR03074 260 ARRIILPTSDARLIALDADTGKLCEDFG 287 (764)
T ss_pred CCEEEEecCCCeEEEEECCCCCEEEEec
Confidence 3478888899999999999998886653
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases. |
| >PF14779 BBS1: Ciliary BBSome complex subunit 1 | Back alignment and domain information |
|---|
Probab=87.95 E-value=8.5 Score=28.02 Aligned_cols=71 Identities=15% Similarity=0.165 Sum_probs=47.3
Q ss_pred eceEEEEEcc------CC-ceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeC-CCCeEEEEecC
Q psy7433 123 SPVKCLAIDP------HE-EFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVD-GGSRLFSCGAD 194 (213)
Q Consensus 123 ~~v~~~~~~~------~~-~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~s~~~d 194 (213)
..|+||+--+ +. ..|+.|+++|.|.|.|.+....+........+.. -...-.+. -+.+++.++.|
T Consensus 177 t~ITcm~tikk~~~d~~a~scLViGTE~~~i~iLd~~af~il~~~~lpsvPv~-------i~~~G~~devdyRI~Va~Rd 249 (257)
T PF14779_consen 177 TVITCMATIKKSSADEDAVSCLVIGTESGEIYILDPQAFTILKQVQLPSVPVF-------ISVSGQYDEVDYRIVVACRD 249 (257)
T ss_pred ceeEEeeeecccccCCCCcceEEEEecCCeEEEECchhheeEEEEecCCCceE-------EEEEeeeeccceEEEEEeCC
Confidence 5677776432 11 2799999999999999988888777766542110 01111233 35679999999
Q ss_pred CcEEEE
Q psy7433 195 GSMKVR 200 (213)
Q Consensus 195 ~~i~iw 200 (213)
|.|++.
T Consensus 250 g~iy~i 255 (257)
T PF14779_consen 250 GKIYTI 255 (257)
T ss_pred CEEEEE
Confidence 998764
|
|
| >PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I [] | Back alignment and domain information |
|---|
Probab=87.67 E-value=17 Score=31.26 Aligned_cols=175 Identities=10% Similarity=0.076 Sum_probs=93.9
Q ss_pred ccCceEEEEEe---C----CCCeEEEeeccCCCccEEEEeCCCc------c------cccceeeeee---ecCCceEEEE
Q psy7433 6 HNKITSDFVFL---G----SCSLVATAGHSSESKNVCLWDSLLP------Q------KKALVQAFVC---HDQGASSLVF 63 (213)
Q Consensus 6 h~~~v~~~~~~---~----~~~~l~~~g~~s~~~~i~iwd~~~~------~------~~~~~~~~~~---~~~~v~~~~~ 63 (213)
-..+|..|+|. . ..++|++- ....+.|+...-. . ...++..+.. ...+...++|
T Consensus 78 ~~~PI~qI~fa~~~~~~~~~~~~l~Vr----t~~st~I~~p~~~~~~~~~~~~~s~i~~~~l~~i~~~~tgg~~~aDv~F 153 (765)
T PF10214_consen 78 DGSPIKQIKFATLSESFDEKSRWLAVR----TETSTTILRPEYHRVISSIRSRPSRIDPNPLLTISSSDTGGFPHADVAF 153 (765)
T ss_pred CCCCeeEEEecccccccCCcCcEEEEE----cCCEEEEEEcccccccccccCCccccccceeEEechhhcCCCccceEEe
Confidence 45789999998 2 22466665 5677777772100 0 0122333331 2346788999
Q ss_pred ec-CCCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCceeeceEEEEEccCCceEEEecC
Q psy7433 64 AP-QHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPHEEFFVTGAG 142 (213)
Q Consensus 64 ~~-~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~~~~l~~~~~ 142 (213)
+| +...||.....|...+||+...... ......+.-...|.. -.|..-......+.|.++.+.|++.+.
T Consensus 154 nP~~~~q~AiVD~~G~Wsvw~i~~~~~~------~~~~~~~~~~~~gsi----~~d~~e~s~w~rI~W~~~~~~lLv~~r 223 (765)
T PF10214_consen 154 NPWDQRQFAIVDEKGNWSVWDIKGRPKR------KSSNLRLSRNISGSI----IFDPEELSNWKRILWVSDSNRLLVCNR 223 (765)
T ss_pred ccCccceEEEEeccCcEEEEEecccccc------CCcceeeccCCCccc----cCCCcccCcceeeEecCCCCEEEEEcC
Confidence 99 5578999999999999999221110 001111111111111 011111145567888887777777765
Q ss_pred CCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCC--CeEEEEecCCcEEEEeCCC
Q psy7433 143 DGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG--SRLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 143 dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~l~s~~~d~~i~iw~~~~ 204 (213)
. .+.++|+++......+..... ...|..+.-+|. ++++.- ....|...++..
T Consensus 224 ~-~l~~~d~~~~~~~~~l~~~~~--------~~~IlDv~~~~~~~~~~FiL-Ts~eiiw~~~~~ 277 (765)
T PF10214_consen 224 S-KLMLIDFESNWQTEYLVTAKT--------WSWILDVKRSPDNPSHVFIL-TSKEIIWLDVKS 277 (765)
T ss_pred C-ceEEEECCCCCccchhccCCC--------hhheeeEEecCCccceEEEE-ecCeEEEEEccC
Confidence 4 678889876654331211111 146777776664 232222 224566666655
|
These proteins are found in fungi. |
| >smart00564 PQQ beta-propeller repeat | Back alignment and domain information |
|---|
Probab=87.28 E-value=1.9 Score=19.74 Aligned_cols=24 Identities=13% Similarity=0.192 Sum_probs=19.9
Q ss_pred EEEEEcCCCcEEEEeccCceEEEe
Q psy7433 69 LLISAGKKGDICVIDLRQRVIRSR 92 (213)
Q Consensus 69 ~l~~~~~d~~v~iwd~~~~~~~~~ 92 (213)
.++.++.+|.+..+|.++|+.+-.
T Consensus 8 ~v~~~~~~g~l~a~d~~~G~~~W~ 31 (33)
T smart00564 8 TVYVGSTDGTLYALDAKTGEILWT 31 (33)
T ss_pred EEEEEcCCCEEEEEEcccCcEEEE
Confidence 677888899999999998877654
|
Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases. |
| >PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal | Back alignment and domain information |
|---|
Probab=87.22 E-value=6.1 Score=25.56 Aligned_cols=80 Identities=13% Similarity=0.121 Sum_probs=47.3
Q ss_pred EEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCC----CCe-EEEEecCCcEEEEe
Q psy7433 127 CLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG----GSR-LFSCGADGSMKVRQ 201 (213)
Q Consensus 127 ~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~-l~s~~~d~~i~iw~ 201 (213)
.-.|.....-|++++.-|.|.|++.........- ......+-.....|++++-.+ +++ ++..+....+..||
T Consensus 3 iGkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~---~~~~i~~LNin~~italaaG~l~~~~~~D~LliGt~t~llaYD 79 (136)
T PF14781_consen 3 IGKFDGVHPCLACATTGGKVFIHNPHERGQRTGR---QDSDISFLNINQEITALAAGRLKPDDGRDCLLIGTQTSLLAYD 79 (136)
T ss_pred EEEeCCCceeEEEEecCCEEEEECCCcccccccc---ccCceeEEECCCceEEEEEEecCCCCCcCEEEEeccceEEEEE
Confidence 3456666667888989999999987533221111 111112222335677776543 222 45555666899999
Q ss_pred CCCCcccc
Q psy7433 202 LPDRDAVV 209 (213)
Q Consensus 202 ~~~~~~~~ 209 (213)
+.+...+.
T Consensus 80 V~~N~d~F 87 (136)
T PF14781_consen 80 VENNSDLF 87 (136)
T ss_pred cccCchhh
Confidence 98776543
|
|
| >PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST) | Back alignment and domain information |
|---|
Probab=86.84 E-value=11 Score=28.20 Aligned_cols=70 Identities=9% Similarity=0.142 Sum_probs=47.3
Q ss_pred eEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecC-C----ceEEEEecCCCEEEEEcCCCcEEEEec
Q psy7433 10 TSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQ-G----ASSLVFAPQHQLLISAGKKGDICVIDL 84 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~-~----v~~~~~~~~~~~l~~~~~d~~v~iwd~ 84 (213)
|+++...++|++|++. ..-..|.+.|- .+++.+..+.+... . -...+|-.+-+.+-.+..++.|.++|=
T Consensus 146 iNsV~~~~~G~yLiS~---R~~~~i~~I~~---~tG~I~W~lgG~~~~df~~~~~~f~~QHdar~~~~~~~~~~IslFDN 219 (299)
T PF14269_consen 146 INSVDKDDDGDYLISS---RNTSTIYKIDP---STGKIIWRLGGKRNSDFTLPATNFSWQHDARFLNESNDDGTISLFDN 219 (299)
T ss_pred eeeeeecCCccEEEEe---cccCEEEEEEC---CCCcEEEEeCCCCCCcccccCCcEeeccCCEEeccCCCCCEEEEEcC
Confidence 7778888899999998 67778888885 56777777655411 1 112344445555555567888999986
Q ss_pred c
Q psy7433 85 R 85 (213)
Q Consensus 85 ~ 85 (213)
.
T Consensus 220 ~ 220 (299)
T PF14269_consen 220 A 220 (299)
T ss_pred C
Confidence 3
|
|
| >PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2 | Back alignment and domain information |
|---|
Probab=86.68 E-value=10 Score=27.70 Aligned_cols=59 Identities=10% Similarity=0.094 Sum_probs=38.0
Q ss_pred CCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecc
Q psy7433 30 ESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFN 94 (213)
Q Consensus 30 ~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~ 94 (213)
.++...+||. .+.+.+.++.- .++=..++ .+++.|+....+..+.++|..+.+....+.
T Consensus 108 k~~~~f~yd~---~tl~~~~~~~y-~~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~ 166 (264)
T PF05096_consen 108 KEGTGFVYDP---NTLKKIGTFPY-PGEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQ 166 (264)
T ss_dssp SSSEEEEEET---TTTEEEEEEE--SSS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE
T ss_pred cCCeEEEEcc---ccceEEEEEec-CCcceEEE--cCCCEEEEECCccceEEECCcccceEEEEE
Confidence 7889999998 45666666653 34445666 467778777777899999988776555443
|
3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X. |
| >KOG1896|consensus | Back alignment and domain information |
|---|
Probab=86.37 E-value=24 Score=31.66 Aligned_cols=118 Identities=17% Similarity=0.173 Sum_probs=61.9
Q ss_pred CccEEEEeCCC-------cccccceeeee--eecCCceEEEEecCCCEEEEEcCCCcEEEEec-cCceEEEe-ccc----
Q psy7433 31 SKNVCLWDSLL-------PQKKALVQAFV--CHDQGASSLVFAPQHQLLISAGKKGDICVIDL-RQRVIRSR-FNA---- 95 (213)
Q Consensus 31 ~~~i~iwd~~~-------~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~-~~~~~~~~-~~~---- 95 (213)
-|.+.|+|+-+ +.+...++.+. ...+.|..++ .-+|.++.+-+ -.|.+|++ +....+.. |-.
T Consensus 1064 RGr~hi~diIeVVPepgkP~t~~KlKel~~eE~KGtVsavc-eV~G~l~~~~G--qKI~v~~l~r~~~ligVaFiD~~~y 1140 (1366)
T KOG1896|consen 1064 RGRIHIFDIIEVVPEPGKPFTKNKLKELYIEEQKGTVSAVC-EVRGHLLSSQG--QKIIVRKLDRDSELIGVAFIDLPLY 1140 (1366)
T ss_pred cccEEEEEEEEecCCCCCCcccceeeeeehhhcccceEEEE-EeccEEEEccC--cEEEEEEeccCCcceeeEEecccee
Confidence 47899999721 12222222221 2345555544 33665444433 46889999 43332211 100
Q ss_pred ---------------CCCCeeEEEecCCCCEEEEecCCCceeeceEEEEEccCCc--eEEEecCCCcEEEEEcc
Q psy7433 96 ---------------HESPVKCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPHEE--FFVTGAGDGDIKVWSLS 152 (213)
Q Consensus 96 ---------------~~~~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~~~--~l~~~~~dg~i~v~d~~ 152 (213)
....+.-+.|..+...+...+.+-.. -.+++..|--+|. +++++..++.|++|-..
T Consensus 1141 v~s~~~vknlIl~gDV~ksisfl~fqeep~rlsL~srd~~~-l~v~s~EFLVdg~~L~flvsDa~rNi~vy~Y~ 1213 (1366)
T KOG1896|consen 1141 VHSMKVVKNLILAGDVMKSISFLGFQEEPYRLSLLSRDFEP-LNVYSTEFLVDGSNLSFLVSDADRNIHVYMYA 1213 (1366)
T ss_pred EEehhhhhhheehhhhhhceEEEEEccCceEEEEeecCCch-hhceeeeeEEcCCeeEEEEEcCCCcEEEEEeC
Confidence 11233444444444444433333221 4566777777665 78899999999998653
|
|
| >PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins | Back alignment and domain information |
|---|
Probab=86.22 E-value=16 Score=29.43 Aligned_cols=126 Identities=13% Similarity=0.201 Sum_probs=64.9
Q ss_pred CccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCCC---CeeEEEecC
Q psy7433 31 SKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHES---PVKCLAIDP 107 (213)
Q Consensus 31 ~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~---~i~~~~~~~ 107 (213)
.+...+.|. .+.....+.........+...++|.+++... ..+..+|+. |+.+..+..... .-..+...|
T Consensus 127 ~~~~~~iD~----~G~Vrw~~~~~~~~~~~~~~l~nG~ll~~~~--~~~~e~D~~-G~v~~~~~l~~~~~~~HHD~~~l~ 199 (477)
T PF05935_consen 127 SSYTYLIDN----NGDVRWYLPLDSGSDNSFKQLPNGNLLIGSG--NRLYEIDLL-GKVIWEYDLPGGYYDFHHDIDELP 199 (477)
T ss_dssp EEEEEEEET----TS-EEEEE-GGGT--SSEEE-TTS-EEEEEB--TEEEEE-TT---EEEEEE--TTEE-B-S-EEE-T
T ss_pred CceEEEECC----CccEEEEEccCccccceeeEcCCCCEEEecC--CceEEEcCC-CCEEEeeecCCcccccccccEECC
Confidence 455666663 4444443332222222266778888777655 678888875 555444432221 235677788
Q ss_pred CCCEEEEecC----------------------CCcee----------------------------------eceEEEEEc
Q psy7433 108 HEEFFVTGAG----------------------DGDIK----------------------------------SPVKCLAID 131 (213)
Q Consensus 108 ~~~~l~~~~~----------------------~~~i~----------------------------------~~v~~~~~~ 131 (213)
+|++|+.+.. +|.+. ..++++.+.
T Consensus 200 nGn~L~l~~~~~~~~~~~~~~~~~D~Ivevd~tG~vv~~wd~~d~ld~~~~~~~~~~~~~~~~~~~~~~DW~H~Nsi~yd 279 (477)
T PF05935_consen 200 NGNLLILASETKYVDEDKDVDTVEDVIVEVDPTGEVVWEWDFFDHLDPYRDTVLKPYPYGDISGSGGGRDWLHINSIDYD 279 (477)
T ss_dssp TS-EEEEEEETTEE-TS-EE---S-EEEEE-TTS-EEEEEEGGGTS-TT--TTGGT--SSSSS-SSTTSBS--EEEEEEE
T ss_pred CCCEEEEEeecccccCCCCccEecCEEEEECCCCCEEEEEehHHhCCcccccccccccccccccCCCCCCccccCccEEe
Confidence 8888887772 11111 467889998
Q ss_pred c-CCceEEEecCCCcEEEEEccCCeeeeeecCC
Q psy7433 132 P-HEEFFVTGAGDGDIKVWSLSGNHLLYNFPGE 163 (213)
Q Consensus 132 ~-~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~ 163 (213)
+ ++.+++++-.-..|...|.++++....+..+
T Consensus 280 ~~dd~iivSsR~~s~V~~Id~~t~~i~Wilg~~ 312 (477)
T PF05935_consen 280 PSDDSIIVSSRHQSAVIKIDYRTGKIKWILGPP 312 (477)
T ss_dssp TTTTEEEEEETTT-EEEEEE-TTS-EEEEES-S
T ss_pred CCCCeEEEEcCcceEEEEEECCCCcEEEEeCCC
Confidence 8 5556666665668888898888887777654
|
Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A. |
| >PF01011 PQQ: PQQ enzyme repeat family | Back alignment and domain information |
|---|
Probab=86.07 E-value=2.6 Score=20.27 Aligned_cols=27 Identities=11% Similarity=0.228 Sum_probs=22.5
Q ss_pred EEEEEcCCCcEEEEeccCceEEEeccc
Q psy7433 69 LLISAGKKGDICVIDLRQRVIRSRFNA 95 (213)
Q Consensus 69 ~l~~~~~d~~v~iwd~~~~~~~~~~~~ 95 (213)
.++.++.+|.|.-.|.++|+.+-.++.
T Consensus 2 ~v~~~~~~g~l~AlD~~TG~~~W~~~~ 28 (38)
T PF01011_consen 2 RVYVGTPDGYLYALDAKTGKVLWKFQT 28 (38)
T ss_dssp EEEEETTTSEEEEEETTTTSEEEEEES
T ss_pred EEEEeCCCCEEEEEECCCCCEEEeeeC
Confidence 466678999999999999998877753
|
; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A .... |
| >PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes | Back alignment and domain information |
|---|
Probab=85.92 E-value=11 Score=27.26 Aligned_cols=107 Identities=12% Similarity=0.137 Sum_probs=55.1
Q ss_pred EEeCCCCeEEEeeccCCCccEEEEeCCC-cccccce---eeeeeecCCceEEEEecCCCEEEEEcCCCc-EEEEeccCc-
Q psy7433 14 VFLGSCSLVATAGHSSESKNVCLWDSLL-PQKKALV---QAFVCHDQGASSLVFAPQHQLLISAGKKGD-ICVIDLRQR- 87 (213)
Q Consensus 14 ~~~~~~~~l~~~g~~s~~~~i~iwd~~~-~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-v~iwd~~~~- 87 (213)
.+.|||+++.+||.......+++++... .....-. ..+. ....-....--|||+.|+.|+.... .-+|.-+..
T Consensus 73 ~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~-~~RWYpT~~~L~DG~vlIvGG~~~~t~E~~P~~~~~ 151 (243)
T PF07250_consen 73 AFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQ-SGRWYPTATTLPDGRVLIVGGSNNPTYEFWPPKGPG 151 (243)
T ss_pred CCCCCCCEEEeCCCCccccceEEEecCCCCCCCCceECccccc-CCCccccceECCCCCEEEEeCcCCCcccccCCccCC
Confidence 3557899999998533345688888632 0001100 0111 1222334445578999998887643 334443211
Q ss_pred -eEE--Eeccc-----CCCCeeEEEecCCCCEEEEecCCCce
Q psy7433 88 -VIR--SRFNA-----HESPVKCLAIDPHEEFFVTGAGDGDI 121 (213)
Q Consensus 88 -~~~--~~~~~-----~~~~i~~~~~~~~~~~l~~~~~~~~i 121 (213)
... ..+.. ...----+...|+|+.|+.+..+..+
T Consensus 152 ~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~~s~i 193 (243)
T PF07250_consen 152 PGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANRGSII 193 (243)
T ss_pred CCceeeecchhhhccCccccCceEEEcCCCCEEEEEcCCcEE
Confidence 111 11111 01111256678899999887765443
|
Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium []. |
| >PF13449 Phytase-like: Esterase-like activity of phytase | Back alignment and domain information |
|---|
Probab=85.68 E-value=14 Score=28.09 Aligned_cols=80 Identities=15% Similarity=0.076 Sum_probs=43.2
Q ss_pred CceEEEEEeC-CCCeEEEeeccCCCcc------EEEEeCCCcc-ccccee-----eeeeecC--------CceEEEEecC
Q psy7433 8 KITSDFVFLG-SCSLVATAGHSSESKN------VCLWDSLLPQ-KKALVQ-----AFVCHDQ--------GASSLVFAPQ 66 (213)
Q Consensus 8 ~~v~~~~~~~-~~~~l~~~g~~s~~~~------i~iwd~~~~~-~~~~~~-----~~~~~~~--------~v~~~~~~~~ 66 (213)
+.+..|.+.| ++.+++.+ .++. +...++.... ....+. .+....+ ..-++++.++
T Consensus 20 GGlSgl~~~~~~~~~~avS----D~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~ 95 (326)
T PF13449_consen 20 GGLSGLDYDPDDGRFYAVS----DRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPD 95 (326)
T ss_pred CcEeeEEEeCCCCEEEEEE----CCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecC
Confidence 5678899996 55555554 6666 5555543200 011111 1111111 3447788778
Q ss_pred CCEEEEEcCC------CcEEEEeccCceEEEe
Q psy7433 67 HQLLISAGKK------GDICVIDLRQRVIRSR 92 (213)
Q Consensus 67 ~~~l~~~~~d------~~v~iwd~~~~~~~~~ 92 (213)
+.++++.-.+ ..|..++.. |+....
T Consensus 96 g~~~is~E~~~~~~~~p~I~~~~~~-G~~~~~ 126 (326)
T PF13449_consen 96 GSFWISSEGGRTGGIPPRIRRFDLD-GRVIRR 126 (326)
T ss_pred CCEEEEeCCccCCCCCCEEEEECCC-Ccccce
Confidence 8777776666 677777765 544433
|
|
| >PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=85.41 E-value=16 Score=28.62 Aligned_cols=74 Identities=12% Similarity=0.089 Sum_probs=42.4
Q ss_pred EEEeCCCCeEEEeeccC--C------CccEEEEeCCCcccccceeeeeeecCC--ceEEEEecCCCEEEEEc---CC-Cc
Q psy7433 13 FVFLGSCSLVATAGHSS--E------SKNVCLWDSLLPQKKALVQAFVCHDQG--ASSLVFAPQHQLLISAG---KK-GD 78 (213)
Q Consensus 13 ~~~~~~~~~l~~~g~~s--~------~~~i~iwd~~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~---~d-~~ 78 (213)
+.|.++++.|+...... . ...|+.|.+.++... -...+...... ...+..++++++|+... .+ ..
T Consensus 175 ~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~~~~~gt~~~~-d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~ 253 (414)
T PF02897_consen 175 VSWSDDGKGFFYTRFDEDQRTSDSGYPRQVYRHKLGTPQSE-DELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESE 253 (414)
T ss_dssp EEECTTSSEEEEEECSTTTSS-CCGCCEEEEEEETTS-GGG--EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEE
T ss_pred EEEeCCCCEEEEEEeCcccccccCCCCcEEEEEECCCChHh-CeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCe
Confidence 89999988776653211 1 345788887432221 12233333333 45788899999877533 23 45
Q ss_pred EEEEeccCc
Q psy7433 79 ICVIDLRQR 87 (213)
Q Consensus 79 v~iwd~~~~ 87 (213)
+.+.|+..+
T Consensus 254 v~~~d~~~~ 262 (414)
T PF02897_consen 254 VYLLDLDDG 262 (414)
T ss_dssp EEEEECCCT
T ss_pred EEEEecccc
Confidence 788888764
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A .... |
| >PHA03098 kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=85.33 E-value=19 Score=29.39 Aligned_cols=52 Identities=8% Similarity=0.075 Sum_probs=27.6
Q ss_pred cCCCEEEEEcCCC------cEEEEeccCceEEEecccCC---CCeeEEEecCCCCEEEEecCCC
Q psy7433 65 PQHQLLISAGKKG------DICVIDLRQRVIRSRFNAHE---SPVKCLAIDPHEEFFVTGAGDG 119 (213)
Q Consensus 65 ~~~~~l~~~~~d~------~v~iwd~~~~~~~~~~~~~~---~~i~~~~~~~~~~~l~~~~~~~ 119 (213)
.++..++.|+.++ .+..||..+.+... +.... .....+. -+++.++.|+.++
T Consensus 293 ~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~-~~~~~~~R~~~~~~~--~~~~lyv~GG~~~ 353 (534)
T PHA03098 293 LNNVIYFIGGMNKNNLSVNSVVSYDTKTKSWNK-VPELIYPRKNPGVTV--FNNRIYVIGGIYN 353 (534)
T ss_pred ECCEEEEECCCcCCCCeeccEEEEeCCCCeeeE-CCCCCcccccceEEE--ECCEEEEEeCCCC
Confidence 3556667776542 57788887765432 22111 1112222 2567777777653
|
|
| >PLN00033 photosystem II stability/assembly factor; Provisional | Back alignment and domain information |
|---|
Probab=84.71 E-value=17 Score=28.48 Aligned_cols=134 Identities=12% Similarity=0.125 Sum_probs=73.1
Q ss_pred ceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee---------------
Q psy7433 58 ASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK--------------- 122 (213)
Q Consensus 58 v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~--------------- 122 (213)
...+..++++.+++.+..-..++-||--...-...-......+..+.+.+++..++++...+...
T Consensus 241 f~~v~~~~dG~~~~vg~~G~~~~s~d~G~~~W~~~~~~~~~~l~~v~~~~dg~l~l~g~~G~l~~S~d~G~~~~~~~f~~ 320 (398)
T PLN00033 241 FSTVNRSPDGDYVAVSSRGNFYLTWEPGQPYWQPHNRASARRIQNMGWRADGGLWLLTRGGGLYVSKGTGLTEEDFDFEE 320 (398)
T ss_pred eeeEEEcCCCCEEEEECCccEEEecCCCCcceEEecCCCccceeeeeEcCCCCEEEEeCCceEEEecCCCCcccccceee
Confidence 34455667777776665433333344321110111122355688899998888776553322221
Q ss_pred -------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCC
Q psy7433 123 -------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADG 195 (213)
Q Consensus 123 -------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~ 195 (213)
..+..+.|.+++..+++| ..|.+..-. ..++.-...+..... ....+.+.|.+++.....+.+|
T Consensus 321 ~~~~~~~~~l~~v~~~~d~~~~a~G-~~G~v~~s~-D~G~tW~~~~~~~~~-------~~~ly~v~f~~~~~g~~~G~~G 391 (398)
T PLN00033 321 ADIKSRGFGILDVGYRSKKEAWAAG-GSGILLRST-DGGKSWKRDKGADNI-------AANLYSVKFFDDKKGFVLGNDG 391 (398)
T ss_pred cccCCCCcceEEEEEcCCCcEEEEE-CCCcEEEeC-CCCcceeEccccCCC-------CcceeEEEEcCCCceEEEeCCc
Confidence 136778888777755555 566554432 333332332211100 1468899988777777777888
Q ss_pred cEEEE
Q psy7433 196 SMKVR 200 (213)
Q Consensus 196 ~i~iw 200 (213)
.|--|
T Consensus 392 ~il~~ 396 (398)
T PLN00033 392 VLLRY 396 (398)
T ss_pred EEEEe
Confidence 76654
|
|
| >PF14761 HPS3_N: Hermansky-Pudlak syndrome 3 | Back alignment and domain information |
|---|
Probab=84.65 E-value=12 Score=26.47 Aligned_cols=43 Identities=16% Similarity=0.216 Sum_probs=32.3
Q ss_pred CCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEc
Q psy7433 30 ESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG 74 (213)
Q Consensus 30 ~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 74 (213)
....|.+|++. .+..+....+..- +.|..+.++..|++|++--
T Consensus 36 ~g~~Vev~~l~-~~~~~~~~~F~Tv-~~V~~l~y~~~GDYlvTlE 78 (215)
T PF14761_consen 36 SGCKVEVYDLE-QEECPLLCTFSTV-GRVLQLVYSEAGDYLVTLE 78 (215)
T ss_pred CCCEEEEEEcc-cCCCceeEEEcch-hheeEEEeccccceEEEEE
Confidence 46789999995 2344555556543 7799999999999999864
|
|
| >PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST) | Back alignment and domain information |
|---|
Probab=84.63 E-value=15 Score=27.58 Aligned_cols=103 Identities=14% Similarity=0.177 Sum_probs=62.9
Q ss_pred ceEEEEecCCCEEEEEc------------------CCCcEEEEeccCceEEEecccC--CCCeeEE-EecCCCCEEEEec
Q psy7433 58 ASSLVFAPQHQLLISAG------------------KKGDICVIDLRQRVIRSRFNAH--ESPVKCL-AIDPHEEFFVTGA 116 (213)
Q Consensus 58 v~~~~~~~~~~~l~~~~------------------~d~~v~iwd~~~~~~~~~~~~~--~~~i~~~-~~~~~~~~l~~~~ 116 (213)
...+.+.++|+.|++.- .|+.+.-.|+++++.+.+.... -...... ...|. ...+.
T Consensus 59 ~He~~it~~gt~lvt~~~~~~~dls~~gg~~~g~i~d~~~~EiDi~TgevlfeW~a~DH~~~~~~~~~~~~~---~~~g~ 135 (299)
T PF14269_consen 59 HHEFEITPDGTALVTAYNPTPADLSPVGGPEDGWILDDVFQEIDIETGEVLFEWSASDHVDPNDSYDSQDPL---PGSGG 135 (299)
T ss_pred ccceEEcCCCcEEEEEccceeccccccCcCCCccEecceeEEeccCCCCEEEEEEhhheecccccccccccc---cCCCc
Confidence 55666777887776321 2445666677777777665431 1110000 00010 00000
Q ss_pred --CCCceeeceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCC
Q psy7433 117 --GDGDIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGE 163 (213)
Q Consensus 117 --~~~~i~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~ 163 (213)
....-...++++...++|.+|++.-.-..|.+.|-++++.+-.+.+.
T Consensus 136 ~~~~~~D~~HiNsV~~~~~G~yLiS~R~~~~i~~I~~~tG~I~W~lgG~ 184 (299)
T PF14269_consen 136 SSSFPWDYFHINSVDKDDDGDYLISSRNTSTIYKIDPSTGKIIWRLGGK 184 (299)
T ss_pred CCCCCCCccEeeeeeecCCccEEEEecccCEEEEEECCCCcEEEEeCCC
Confidence 11111267888899999999999988899999999999998888765
|
|
| >TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family | Back alignment and domain information |
|---|
Probab=84.61 E-value=19 Score=28.82 Aligned_cols=55 Identities=18% Similarity=0.272 Sum_probs=37.4
Q ss_pred cCCceEEEEecCCCEEEEEcCCCcEEEEeccCce--EEEecc-----cCCCCeeEEEecCCC
Q psy7433 55 DQGASSLVFAPQHQLLISAGKKGDICVIDLRQRV--IRSRFN-----AHESPVKCLAIDPHE 109 (213)
Q Consensus 55 ~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~--~~~~~~-----~~~~~i~~~~~~~~~ 109 (213)
-.....++|.|++++|++--..|.|++++..++. .+..+. ........|+++|+-
T Consensus 29 L~~Pw~maflPDG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF 90 (454)
T TIGR03606 29 LNKPWALLWGPDNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDF 90 (454)
T ss_pred CCCceEEEEcCCCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCc
Confidence 4557899999999877776546999999765542 222221 134567899999874
|
PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis. |
| >PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea | Back alignment and domain information |
|---|
Probab=84.46 E-value=18 Score=28.60 Aligned_cols=98 Identities=14% Similarity=0.207 Sum_probs=45.1
Q ss_pred CCCeEEEeeccCCCccEEEEeCC-Ccccccceeeeee---ec----CCceEEEEecCCCEEEEEc------CCCcEEEEe
Q psy7433 18 SCSLVATAGHSSESKNVCLWDSL-LPQKKALVQAFVC---HD----QGASSLVFAPQHQLLISAG------KKGDICVID 83 (213)
Q Consensus 18 ~~~~l~~~g~~s~~~~i~iwd~~-~~~~~~~~~~~~~---~~----~~v~~~~~~~~~~~l~~~~------~d~~v~iwd 83 (213)
+.++|+..| -..+.|.|.|+. ++...+..+.+.. +. .....+..-|+|+.++++- .-|-+.+.|
T Consensus 86 ~Rr~Li~Pg--L~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD 163 (461)
T PF05694_consen 86 ERRYLILPG--LRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVLLD 163 (461)
T ss_dssp -S-EEEEEB--TTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEEE-
T ss_pred cCCcEEeee--eccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEEEc
Confidence 456777765 578999999995 2333344444432 11 1223344457888888752 235688889
Q ss_pred ccCceEEEecccC---CCCeeEEEecCCCCEEEEecC
Q psy7433 84 LRQRVIRSRFNAH---ESPVKCLAIDPHEEFFVTGAG 117 (213)
Q Consensus 84 ~~~~~~~~~~~~~---~~~i~~~~~~~~~~~l~~~~~ 117 (213)
-++.+........ ...-..+-+.|..+.+++...
T Consensus 164 ~~tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeW 200 (461)
T PF05694_consen 164 GETFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEW 200 (461)
T ss_dssp TTT--EEEE--SB-TT------EEEETTTTEEEE-B-
T ss_pred CccccccceeccCCCCCCCCCCeEEcCCCCEEEEecc
Confidence 8888777766542 223467788888887777654
|
The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A. |
| >KOG1916|consensus | Back alignment and domain information |
|---|
Probab=84.15 E-value=1.6 Score=37.25 Aligned_cols=73 Identities=11% Similarity=-0.001 Sum_probs=40.9
Q ss_pred EeCCCCeEEEeeccCCCccEEEEeCC--CcccccceeeeeeecCC-ceEEEEecCCC---------EEEEE-cCCCcEEE
Q psy7433 15 FLGSCSLVATAGHSSESKNVCLWDSL--LPQKKALVQAFVCHDQG-ASSLVFAPQHQ---------LLISA-GKKGDICV 81 (213)
Q Consensus 15 ~~~~~~~l~~~g~~s~~~~i~iwd~~--~~~~~~~~~~~~~~~~~-v~~~~~~~~~~---------~l~~~-~~d~~v~i 81 (213)
.+|||..||+. ..||.++.|.+- ......++..++.|... -.|.-++.+.. +++++ ..+..+++
T Consensus 243 lSpDGtv~a~a---~~dG~v~f~Qiyi~g~~~~rclhewkphd~~p~vC~lc~~~~~~~v~i~~w~~~Itttd~nre~k~ 319 (1283)
T KOG1916|consen 243 LSPDGTVFAWA---ISDGSVGFYQIYITGKIVHRCLHEWKPHDKHPRVCWLCHKQEILVVSIGKWVLRITTTDVNREEKF 319 (1283)
T ss_pred eCCCCcEEEEe---ecCCccceeeeeeeccccHhhhhccCCCCCCCceeeeeccccccCCccceeEEEEecccCCcceeE
Confidence 57888888888 788888888652 11223455556666632 22222332221 23333 34566888
Q ss_pred EeccCceEE
Q psy7433 82 IDLRQRVIR 90 (213)
Q Consensus 82 wd~~~~~~~ 90 (213)
|.....+++
T Consensus 320 w~~a~w~Cl 328 (1283)
T KOG1916|consen 320 WAEAPWQCL 328 (1283)
T ss_pred eeccchhhh
Confidence 876655544
|
|
| >PF12768 Rax2: Cortical protein marker for cell polarity | Back alignment and domain information |
|---|
Probab=83.95 E-value=15 Score=27.23 Aligned_cols=38 Identities=18% Similarity=0.225 Sum_probs=23.3
Q ss_pred CcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEE
Q psy7433 77 GDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVT 114 (213)
Q Consensus 77 ~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 114 (213)
..|++||..+.+....-.+-.+.|+.+.|..+.+.++.
T Consensus 16 ~~lC~yd~~~~qW~~~g~~i~G~V~~l~~~~~~~Llv~ 53 (281)
T PF12768_consen 16 PGLCLYDTDNSQWSSPGNGISGTVTDLQWASNNQLLVG 53 (281)
T ss_pred CEEEEEECCCCEeecCCCCceEEEEEEEEecCCEEEEE
Confidence 35888888776655444445566777777644444444
|
|
| >KOG1983|consensus | Back alignment and domain information |
|---|
Probab=83.70 E-value=32 Score=30.72 Aligned_cols=28 Identities=14% Similarity=0.264 Sum_probs=24.2
Q ss_pred ceEEEEEeCCCCeEEEeeccCCCccEEEEeC
Q psy7433 9 ITSDFVFLGSCSLVATAGHSSESKNVCLWDS 39 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~ 39 (213)
....++|+|...++|.+ ...|.|+++-.
T Consensus 37 ~~~~~afD~~q~llai~---t~tg~i~~yg~ 64 (993)
T KOG1983|consen 37 TPSALAFDPTQGLLAIG---TRTGAIKIYGQ 64 (993)
T ss_pred CCcceeeccccceEEEE---EecccEEEecc
Confidence 45678899999999999 79999999975
|
|
| >COG5290 IkappaB kinase complex, IKAP component [Transcription] | Back alignment and domain information |
|---|
Probab=83.44 E-value=28 Score=29.94 Aligned_cols=34 Identities=12% Similarity=0.018 Sum_probs=19.3
Q ss_pred cCceEEEEEeCCCCeE-EEeeccCCCccEEEEeCC
Q psy7433 7 NKITSDFVFLGSCSLV-ATAGHSSESKNVCLWDSL 40 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l-~~~g~~s~~~~i~iwd~~ 40 (213)
++.+..+.|..-+..+ ++|+-++.|.-|.+....
T Consensus 16 sg~~~~l~fdsv~D~iyi~c~l~s~d~Giev~~~s 50 (1243)
T COG5290 16 SGDEDELGFDSVGDWIYITCVLGSTDKGIEVAKES 50 (1243)
T ss_pred CCChHHhcccccCceEEEEeecCCCCCCeeeeeec
Confidence 3455567776544443 455444555557777653
|
|
| >PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins | Back alignment and domain information |
|---|
Probab=83.20 E-value=21 Score=28.18 Aligned_cols=29 Identities=34% Similarity=0.683 Sum_probs=24.1
Q ss_pred eEEEEEccCCceEEEecCCCcEEEEEccC
Q psy7433 125 VKCLAIDPHEEFFVTGAGDGDIKVWSLSG 153 (213)
Q Consensus 125 v~~~~~~~~~~~l~~~~~dg~i~v~d~~~ 153 (213)
|..++..+..+.+++.+.+|.|.+|++..
T Consensus 192 I~~v~~d~~r~~ly~l~~~~~Iq~w~l~~ 220 (422)
T PF08801_consen 192 IVQVAVDPSRRLLYTLTSDGSIQVWDLGP 220 (422)
T ss_dssp EEEEEEETTTTEEEEEESSE-EEEEEE-S
T ss_pred eeeEEecCCcCEEEEEeCCCcEEEEEEeC
Confidence 77788888888999999999999999974
|
RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A. |
| >TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118 | Back alignment and domain information |
|---|
Probab=83.18 E-value=17 Score=27.27 Aligned_cols=185 Identities=16% Similarity=0.188 Sum_probs=99.2
Q ss_pred eEEEEEeCCCCeEEEeeccCCCccEEEEeCCCc----ccccceeeeee-----ecCCceEEEEecCCC------------
Q psy7433 10 TSDFVFLGSCSLVATAGHSSESKNVCLWDSLLP----QKKALVQAFVC-----HDQGASSLVFAPQHQ------------ 68 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~----~~~~~~~~~~~-----~~~~v~~~~~~~~~~------------ 68 (213)
-+.|+++|.+.+-++. ...+...+||.+.. .....+-.+.. .....+.+.|+....
T Consensus 25 ~WGia~~p~~~~WVad---ngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a 101 (336)
T TIGR03118 25 AWGLSYRPGGPFWVAN---TGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPS 101 (336)
T ss_pred cceeEecCCCCEEEec---CCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccce
Confidence 5679999988877776 57789999998411 11122333332 123567788874332
Q ss_pred EEEEEcCCCcEEEEeccCce-----EEEecccC-CCCe-eEEEecC--CCCEEEEe-cCCCcee----------------
Q psy7433 69 LLISAGKKGDICVIDLRQRV-----IRSRFNAH-ESPV-KCLAIDP--HEEFFVTG-AGDGDIK---------------- 122 (213)
Q Consensus 69 ~l~~~~~d~~v~iwd~~~~~-----~~~~~~~~-~~~i-~~~~~~~--~~~~l~~~-~~~~~i~---------------- 122 (213)
.++.+++||+|.-|...-+. ....+... ...+ ..+++-. .+.+|..+ ..+++|.
T Consensus 102 ~Fif~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~~~~~~g~F~ 181 (336)
T TIGR03118 102 RFLFVTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFRPPPLPGSFI 181 (336)
T ss_pred eEEEEeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCccccccCCCCcc
Confidence 35677889999999853221 11122211 1222 3344432 23444433 3344443
Q ss_pred -------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeC
Q psy7433 123 -------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVD 183 (213)
Q Consensus 123 -------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 183 (213)
--|+-..-.++.+.=+.|-.-|.|.+||+. ++.++.+...... ...+.++..
T Consensus 182 DP~iPagyAPFnIqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~~-G~l~~r~as~g~L--------NaPWG~a~A 252 (336)
T TIGR03118 182 DPALPAGYAPFNVQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTLN-GQLLRRVASSGRL--------NAPWGLAIA 252 (336)
T ss_pred CCCCCCCCCCcceEEECCeEEEEEEecCCcccccccCCCcceEEEEcCC-CcEEEEeccCCcc--------cCCceeeeC
Confidence 011111112222222333444688888864 5566655432221 456677776
Q ss_pred C------CCeEEEEe-cCCcEEEEeCCCCc
Q psy7433 184 G------GSRLFSCG-ADGSMKVRQLPDRD 206 (213)
Q Consensus 184 ~------~~~l~s~~-~d~~i~iw~~~~~~ 206 (213)
| .+.|+.+- .||.|..||..++.
T Consensus 253 Pa~FG~~sg~lLVGNFGDG~InaFD~~sG~ 282 (336)
T TIGR03118 253 PESFGSLSGALLVGNFGDGTINAYDPQSGA 282 (336)
T ss_pred hhhhCCCCCCeEEeecCCceeEEecCCCCc
Confidence 6 23455554 69999999988765
|
This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus. |
| >PF12768 Rax2: Cortical protein marker for cell polarity | Back alignment and domain information |
|---|
Probab=83.17 E-value=17 Score=27.05 Aligned_cols=72 Identities=18% Similarity=0.330 Sum_probs=43.9
Q ss_pred ccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEc------CCCcEEEEeccCceEEEeccc-----CCCCe
Q psy7433 32 KNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG------KKGDICVIDLRQRVIRSRFNA-----HESPV 100 (213)
Q Consensus 32 ~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------~d~~v~iwd~~~~~~~~~~~~-----~~~~i 100 (213)
..|++||....+-...-.. -.+.|+++.|..+.+.++.|. ....+..||+.+.... .+.. -.+++
T Consensus 16 ~~lC~yd~~~~qW~~~g~~---i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w~-~~~~~~s~~ipgpv 91 (281)
T PF12768_consen 16 PGLCLYDTDNSQWSSPGNG---ISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQTWS-SLGGGSSNSIPGPV 91 (281)
T ss_pred CEEEEEECCCCEeecCCCC---ceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCeee-ecCCcccccCCCcE
Confidence 4699999743222222222 346799999986666666663 3556888998776432 2222 24677
Q ss_pred eEEEecC
Q psy7433 101 KCLAIDP 107 (213)
Q Consensus 101 ~~~~~~~ 107 (213)
..+.+..
T Consensus 92 ~a~~~~~ 98 (281)
T PF12768_consen 92 TALTFIS 98 (281)
T ss_pred EEEEeec
Confidence 7777643
|
|
| >TIGR03032 conserved hypothetical protein TIGR03032 | Back alignment and domain information |
|---|
Probab=82.03 E-value=20 Score=27.12 Aligned_cols=104 Identities=14% Similarity=0.135 Sum_probs=62.4
Q ss_pred CCCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCceeeceEEEEEccCCceEEEecCCCc
Q psy7433 66 QHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPHEEFFVTGAGDGD 145 (213)
Q Consensus 66 ~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~~~~l~~~~~dg~ 145 (213)
++++.++=+..|.+.-+|.++|+...... -++....+.|. |.+++++-..-.-......+.+...-+.. ..-
T Consensus 212 dgrLwvldsgtGev~~vD~~~G~~e~Va~-vpG~~rGL~f~--G~llvVgmSk~R~~~~f~glpl~~~l~~~-----~CG 283 (335)
T TIGR03032 212 QGKLWLLNSGRGELGYVDPQAGKFQPVAF-LPGFTRGLAFA--GDFAFVGLSKLRESRVFGGLPIEERLDAL-----GCG 283 (335)
T ss_pred CCeEEEEECCCCEEEEEcCCCCcEEEEEE-CCCCCccccee--CCEEEEEeccccCCCCcCCCchhhhhhhh-----ccc
Confidence 56777777788999999988774332221 34566788888 77777765433222222222222211111 134
Q ss_pred EEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCC
Q psy7433 146 IKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG 185 (213)
Q Consensus 146 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 185 (213)
|.+.|++++..+..++-.... ..+..++.-|+
T Consensus 284 v~vidl~tG~vv~~l~feg~v--------~EifdV~vLPg 315 (335)
T TIGR03032 284 VAVIDLNSGDVVHWLRFEGVI--------EEIYDVAVLPG 315 (335)
T ss_pred EEEEECCCCCEEEEEEeCCce--------eEEEEEEEecC
Confidence 788899999988777654322 46777888775
|
This protein family is uncharacterized. A number of motifs are conserved perfectly among all member sequences. The function of this protein is unknown. |
| >PF12341 DUF3639: Protein of unknown function (DUF3639) ; InterPro: IPR022100 This domain family is found in eukaryotes, and is approximately 30 amino acids in length | Back alignment and domain information |
|---|
Probab=81.53 E-value=3.6 Score=18.33 Aligned_cols=26 Identities=8% Similarity=0.202 Sum_probs=20.0
Q ss_pred CCeEEEEeCCCCeEEEEecCCcEEEEe
Q psy7433 175 QGVTQLHVDGGSRLFSCGADGSMKVRQ 201 (213)
Q Consensus 175 ~~v~~~~~~~~~~l~s~~~d~~i~iw~ 201 (213)
..|.+++..+ ++++.+.+.+.+|+|.
T Consensus 2 E~i~aia~g~-~~vavaTS~~~lRifs 27 (27)
T PF12341_consen 2 EEIEAIAAGD-SWVAVATSAGYLRIFS 27 (27)
T ss_pred ceEEEEEccC-CEEEEEeCCCeEEecC
Confidence 3577888764 4788888889999874
|
The family is found in association with PF00400 from PFAM. There are two completely conserved residues (E and R) that may be functionally important. |
| >PF14727 PHTB1_N: PTHB1 N-terminus | Back alignment and domain information |
|---|
Probab=80.23 E-value=27 Score=27.61 Aligned_cols=57 Identities=9% Similarity=0.110 Sum_probs=32.6
Q ss_pred ceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCC-CCeEEEEecCCcEEEEeC
Q psy7433 135 EFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG-GSRLFSCGADGSMKVRQL 202 (213)
Q Consensus 135 ~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~s~~~d~~i~iw~~ 202 (213)
.++++-+.||.+.+|+-+.......++..-.+ ++ +.+.+ .+.+++++.+..+.-|..
T Consensus 146 ~~IcVQS~DG~L~~feqe~~~f~~~lp~~llP--------gP---l~Y~~~tDsfvt~sss~~l~~Yky 203 (418)
T PF14727_consen 146 DFICVQSMDGSLSFFEQESFAFSRFLPDFLLP--------GP---LCYCPRTDSFVTASSSWTLECYKY 203 (418)
T ss_pred eEEEEEecCceEEEEeCCcEEEEEEcCCCCCC--------cC---eEEeecCCEEEEecCceeEEEecH
Confidence 47888999999999996544333333332111 22 23333 235666666666655544
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 213 | ||||
| 4g56_B | 357 | Crystal Structure Of Full Length Prmt5/mep50 Comple | 7e-05 | ||
| 2ymu_A | 577 | Structure Of A Highly Repetitive Propeller Structur | 9e-05 | ||
| 2co0_A | 315 | Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs | 4e-04 | ||
| 1p22_A | 435 | Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex | 5e-04 |
| >pdb|4G56|B Chain B, Crystal Structure Of Full Length Prmt5/mep50 Complexes From Xenopus Laevis Length = 357 | Back alignment and structure |
|
| >pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577 | Back alignment and structure |
|
| >pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315 | Back alignment and structure |
|
| >pdb|1P22|A Chain A, Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex: Destruction Motif Binding And Lysine Specificity On The Scfbeta-Trcp1 Ubiquitin Ligase Length = 435 | Back alignment and structure |
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 213 | |||
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 100.0 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 100.0 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 100.0 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 100.0 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 100.0 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 100.0 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 100.0 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 100.0 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 100.0 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 100.0 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 100.0 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 100.0 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 100.0 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 100.0 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 100.0 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 100.0 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 100.0 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 100.0 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 100.0 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 100.0 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 100.0 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 100.0 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 100.0 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 100.0 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 100.0 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 100.0 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 100.0 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 100.0 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 100.0 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 100.0 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 100.0 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 100.0 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 100.0 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 100.0 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 100.0 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 100.0 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 100.0 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 100.0 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 100.0 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 100.0 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 100.0 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 100.0 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 100.0 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 100.0 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 100.0 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 100.0 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 100.0 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 100.0 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 100.0 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 100.0 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 100.0 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 100.0 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 100.0 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 100.0 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 100.0 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 100.0 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 100.0 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 100.0 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 100.0 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 100.0 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 100.0 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 100.0 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 100.0 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 100.0 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 100.0 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 100.0 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 100.0 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 100.0 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 100.0 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 100.0 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 100.0 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 100.0 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 100.0 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 100.0 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 100.0 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 100.0 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 99.98 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 99.98 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 99.98 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 99.98 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 99.98 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 99.98 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 99.98 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 99.98 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 99.98 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 99.98 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 99.98 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 99.98 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 99.98 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 99.98 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 99.97 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.97 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 99.97 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 99.97 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 99.97 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 99.97 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 99.97 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 99.97 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 99.97 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 99.97 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 99.97 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 99.97 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 99.97 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 99.97 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 99.96 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 99.96 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 99.96 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 99.96 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 99.96 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 99.96 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 99.96 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 99.96 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 99.96 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 99.96 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 99.96 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 99.96 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 99.95 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 99.95 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 99.95 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 99.95 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 99.94 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 99.94 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 99.94 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 99.94 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.93 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 99.93 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.92 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.92 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.9 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.89 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.88 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.87 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 99.86 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 99.86 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 99.86 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 99.86 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 99.85 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.85 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.85 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 99.85 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 99.84 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 99.83 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.83 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 99.82 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 99.82 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.82 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.82 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.82 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.8 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 99.8 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.8 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.8 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 99.79 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 99.79 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 99.78 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.77 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 99.76 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 99.75 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 99.75 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 99.73 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.73 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.73 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 99.71 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 99.71 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 99.7 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.7 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 99.7 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 99.69 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.69 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 99.68 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 99.68 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 99.66 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.65 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 99.64 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 99.64 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 99.64 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.63 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 99.61 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.61 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 99.6 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 99.59 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.59 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 99.58 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 99.56 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 99.55 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 99.55 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 99.54 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 99.53 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 99.51 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 99.5 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 99.5 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 99.49 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.48 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 99.45 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.44 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 99.43 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 99.41 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 99.4 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 99.39 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 99.39 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 99.37 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 99.37 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 99.37 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 99.36 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 99.34 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 99.32 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.31 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 99.3 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 99.28 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 99.27 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 99.27 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 99.25 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 99.24 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 99.24 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 99.23 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.21 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 99.2 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.14 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 99.09 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 99.08 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 99.06 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 99.03 | |
| 3hxj_A | 330 | Pyrrolo-quinoline quinone; all beta protein. incom | 98.99 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 98.95 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 98.94 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 98.93 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 98.93 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 98.92 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 98.91 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 98.85 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 98.84 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 98.79 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 98.78 | |
| 3hxj_A | 330 | Pyrrolo-quinoline quinone; all beta protein. incom | 98.76 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 98.75 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 98.74 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 98.74 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 98.7 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 98.67 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 98.64 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 98.63 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 98.6 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 98.59 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 98.57 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 98.57 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 98.57 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 98.53 | |
| 3sov_A | 318 | LRP-6, low-density lipoprotein receptor-related pr | 98.52 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 98.49 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 98.49 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 98.47 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 98.44 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 98.44 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 98.41 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 98.36 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 98.33 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 98.32 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 98.32 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 98.31 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 98.23 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 98.21 | |
| 3v9f_A | 781 | Two-component system sensor histidine kinase/RESP | 98.2 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 98.18 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 98.17 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 98.13 | |
| 3v9f_A | 781 | Two-component system sensor histidine kinase/RESP | 98.12 | |
| 3s94_A | 619 | LRP-6, low-density lipoprotein receptor-related pr | 98.12 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 98.11 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 98.11 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 98.09 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 98.09 | |
| 2p9w_A | 334 | MAL S 1 allergenic protein; beta propeller; 1.35A | 98.09 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 98.08 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 98.06 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 98.05 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 98.02 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 98.02 | |
| 3pbp_A | 452 | Nucleoporin NUP82; beta-propeller, mRNA export, mR | 97.99 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 97.93 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 97.91 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 97.91 | |
| 2xbg_A | 327 | YCF48-like protein; photosynthesis, photosystem II | 97.89 | |
| 4a0p_A | 628 | LRP6, LRP-6, low-density lipoprotein receptor-rela | 97.88 | |
| 3amr_A | 355 | 3-phytase; beta-propeller, phytate, MYO-inositol h | 97.86 | |
| 3pbp_A | 452 | Nucleoporin NUP82; beta-propeller, mRNA export, mR | 97.8 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 97.8 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 97.79 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 97.74 | |
| 2xbg_A | 327 | YCF48-like protein; photosynthesis, photosystem II | 97.67 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 97.62 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 97.55 | |
| 4a0p_A | 628 | LRP6, LRP-6, low-density lipoprotein receptor-rela | 97.5 | |
| 2ism_A | 352 | Putative oxidoreductase; BL41XU spring-8, bladed b | 97.43 | |
| 3s94_A | 619 | LRP-6, low-density lipoprotein receptor-related pr | 97.4 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 97.38 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 97.37 | |
| 1tl2_A | 236 | L10, protein (tachylectin-2); animal lectin, horse | 97.37 | |
| 3sov_A | 318 | LRP-6, low-density lipoprotein receptor-related pr | 97.29 | |
| 1tl2_A | 236 | L10, protein (tachylectin-2); animal lectin, horse | 97.25 | |
| 3amr_A | 355 | 3-phytase; beta-propeller, phytate, MYO-inositol h | 97.24 | |
| 3kya_A | 496 | Putative phosphatase; structural genomics, joint c | 97.21 | |
| 2ism_A | 352 | Putative oxidoreductase; BL41XU spring-8, bladed b | 97.17 | |
| 3kya_A | 496 | Putative phosphatase; structural genomics, joint c | 97.08 | |
| 3sre_A | 355 | PON1, serum paraoxonase; directed evolution, 6-bla | 97.07 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 97.06 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 97.05 | |
| 2xzh_A | 365 | Clathrin heavy chain 1; endocytosis, endocytosis i | 96.89 | |
| 2p9w_A | 334 | MAL S 1 allergenic protein; beta propeller; 1.35A | 96.75 | |
| 3a9g_A | 354 | Putative uncharacterized protein; PQQ dependent de | 96.66 | |
| 1bpo_A | 494 | Protein (clathrin); clathrin endocytosis beta-prop | 96.59 | |
| 2g8s_A | 353 | Glucose/sorbosone dehydrogenases; bladed beta-prop | 96.46 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 96.38 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 96.32 | |
| 1cru_A | 454 | Protein (soluble quinoprotein glucose dehydrogena; | 96.22 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 96.01 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 95.99 | |
| 1cru_A | 454 | Protein (soluble quinoprotein glucose dehydrogena; | 95.93 | |
| 3das_A | 347 | Putative oxidoreductase; aldose sugar dehydrogenas | 95.88 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 95.87 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 95.86 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 95.85 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 95.8 | |
| 3a9g_A | 354 | Putative uncharacterized protein; PQQ dependent de | 95.69 | |
| 3ott_A | 758 | Two-component system sensor histidine kinase; beta | 95.63 | |
| 3sre_A | 355 | PON1, serum paraoxonase; directed evolution, 6-bla | 95.48 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 95.42 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 95.39 | |
| 3sbq_A | 638 | Nitrous-oxide reductase; beta-propeller, cupredoxi | 95.35 | |
| 3das_A | 347 | Putative oxidoreductase; aldose sugar dehydrogenas | 95.34 | |
| 3ei3_A | 1158 | DNA damage-binding protein 1; UV-damage, DDB, nucl | 94.97 | |
| 2g8s_A | 353 | Glucose/sorbosone dehydrogenases; bladed beta-prop | 93.93 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 93.66 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 93.35 | |
| 2wg3_C | 463 | Hedgehog-interacting protein; lipoprotein, develop | 93.27 | |
| 2be1_A | 339 | Serine/threonine-protein kinase/endoribonuclease; | 92.69 | |
| 3ei3_A | 1158 | DNA damage-binding protein 1; UV-damage, DDB, nucl | 92.15 | |
| 3s25_A | 302 | Hypothetical 7-bladed beta-propeller-like protein; | 91.96 | |
| 4gq2_M | 950 | Nucleoporin NUP120; beta propeller alpha helical, | 91.29 | |
| 2xzh_A | 365 | Clathrin heavy chain 1; endocytosis, endocytosis i | 90.26 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 89.15 | |
| 1bpo_A | 494 | Protein (clathrin); clathrin endocytosis beta-prop | 89.15 | |
| 2wg3_C | 463 | Hedgehog-interacting protein; lipoprotein, develop | 88.69 | |
| 3s25_A | 302 | Hypothetical 7-bladed beta-propeller-like protein; | 87.62 | |
| 4fhn_B | 1139 | Nucleoporin NUP120; protein complex,structural pro | 87.56 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 86.88 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 86.66 | |
| 4gq2_M | 950 | Nucleoporin NUP120; beta propeller alpha helical, | 80.28 |
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-38 Score=233.25 Aligned_cols=200 Identities=19% Similarity=0.290 Sum_probs=168.3
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
+|++|.+.|++++|+|++++|+++ +.|+.|++||+ .+...+..+..|..+|.+++|+|++++|++|+.|+.|++
T Consensus 8 ~~~~h~~~V~~~~fsp~~~~l~s~---~~dg~v~lWd~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~v 81 (304)
T 2ynn_A 8 TFSNRSDRVKGIDFHPTEPWVLTT---LYSGRVELWNY---ETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRV 81 (304)
T ss_dssp EEEEECSCEEEEEECSSSSEEEEE---ETTSEEEEEET---TTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEE
T ss_pred eecCCCCceEEEEECCCCCEEEEE---cCCCcEEEEEC---CCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEE
Confidence 688999999999999999999999 68999999999 566778888899999999999999999999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee------------------eceEEEEEcc-CCceEEEecC
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------SPVKCLAIDP-HEEFFVTGAG 142 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------~~v~~~~~~~-~~~~l~~~~~ 142 (213)
||+++++.+..+.+|...|.+++|+|++++|++++.|+.++ ..|.+++|+| ++.+|++|+.
T Consensus 82 wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~ 161 (304)
T 2ynn_A 82 FNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCL 161 (304)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEET
T ss_pred EECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeC
Confidence 99999999999999999999999999999999999999886 5688889988 5678888888
Q ss_pred CCcEEEEEccCCeeeeee-------------cC---------------------CC-CceeEEEecCCCeEEEEeCCCC-
Q psy7433 143 DGDIKVWSLSGNHLLYNF-------------PG---------------------EH-ARSSFFKHIGQGVTQLHVDGGS- 186 (213)
Q Consensus 143 dg~i~v~d~~~~~~~~~~-------------~~---------------------~~-~~~~~~~~~~~~v~~~~~~~~~- 186 (213)
|+.|++||+++......+ .. .. .....+..|...|.+++|+|++
T Consensus 162 D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~ 241 (304)
T 2ynn_A 162 DRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLP 241 (304)
T ss_dssp TSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSS
T ss_pred CCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCC
Confidence 888888887543211110 00 00 0111234466889999999965
Q ss_pred eEEEEecCCcEEEEeCCCCcc
Q psy7433 187 RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 187 ~l~s~~~d~~i~iw~~~~~~~ 207 (213)
.|++++.||.|++||+.+.+.
T Consensus 242 ~l~s~s~Dg~i~iWd~~~~~~ 262 (304)
T 2ynn_A 242 IIISGSEDGTLKIWNSSTYKV 262 (304)
T ss_dssp EEEEEETTSCEEEEETTTCCE
T ss_pred EEEEEcCCCeEEEEECCCCce
Confidence 699999999999999988753
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-38 Score=238.33 Aligned_cols=190 Identities=17% Similarity=0.270 Sum_probs=176.5
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
++.+|.++|++++|+|++.+|+++ +.|+.|++||+ .+++....+.+|...|.+++|+|++++|++|+.|+.|++
T Consensus 103 ~l~gh~~~V~~~~~~p~~~~l~s~---s~Dg~i~vwd~---~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~i 176 (410)
T 1vyh_C 103 ALSGHRSPVTRVIFHPVFSVMVSA---SEDATIKVWDY---ETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKL 176 (410)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEE---ESSSCEEEEET---TTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCE
T ss_pred eecccCCcEEEEEEcCCCCEEEEE---eCCCeEEEEEC---CCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 578999999999999999999999 68999999999 567778889999999999999999999999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCCC
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDG 144 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg 144 (213)
||+.+++.+..+.+|...|.+++|+|+++++++++.|+.++ ..+.++.|+|+++++++|+.|+
T Consensus 177 wd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~ 256 (410)
T 1vyh_C 177 WDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQ 256 (410)
T ss_dssp EETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCC
Confidence 99999999999999999999999999999999999999886 5689999999999999999999
Q ss_pred cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCC---------------------CeEEEEecCCcEEEEeCC
Q psy7433 145 DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG---------------------SRLFSCGADGSMKVRQLP 203 (213)
Q Consensus 145 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---------------------~~l~s~~~d~~i~iw~~~ 203 (213)
.|++||+++++....+..|. ..|.+++|+|+ .+|++++.|+.|++||+.
T Consensus 257 ~v~vwd~~~~~~~~~~~~h~----------~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~ 326 (410)
T 1vyh_C 257 TVRVWVVATKECKAELREHR----------HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326 (410)
T ss_dssp CEEEEETTTCCEEEEECCCS----------SCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETT
T ss_pred eEEEEECCCCceeeEecCCC----------ceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECC
Confidence 99999999999988888876 78999999983 369999999999999999
Q ss_pred CCcc
Q psy7433 204 DRDA 207 (213)
Q Consensus 204 ~~~~ 207 (213)
++..
T Consensus 327 ~~~~ 330 (410)
T 1vyh_C 327 TGMC 330 (410)
T ss_dssp TTEE
T ss_pred CCce
Confidence 8754
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-37 Score=229.55 Aligned_cols=191 Identities=20% Similarity=0.350 Sum_probs=176.2
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
++++|...|.+++|+|++.+++++ +.|+.|++||+ .+.+.+..+..+...+.+++|+|++++|++++.|+.|++
T Consensus 75 ~l~gh~~~v~~~~~~~~~~~l~s~---s~D~~i~lWd~---~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i 148 (321)
T 3ow8_A 75 SLEGHQLGVVSVDISHTLPIAASS---SLDAHIRLWDL---ENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNI 148 (321)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEE---ETTSEEEEEET---TTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEE
T ss_pred eeccCCCCEEEEEECCCCCEEEEE---eCCCcEEEEEC---CCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEE
Confidence 578999999999999999999999 68999999999 566777888888889999999999999999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCCC
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDG 144 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg 144 (213)
||+++++....+..+...+.+++|+|++++|++++.|+.++ .+|.+++|+|++++|++|+.|+
T Consensus 149 ~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg 228 (321)
T 3ow8_A 149 FGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDG 228 (321)
T ss_dssp EETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTS
T ss_pred EEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCC
Confidence 99999988888888889999999999999999999999886 5789999999999999999999
Q ss_pred cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCccc
Q psy7433 145 DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 145 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
.|++||+++++....+.+|. ..|.+++|+|++ +|++++.|+.|++||+.+++.+
T Consensus 229 ~i~iwd~~~~~~~~~~~~h~----------~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~ 283 (321)
T 3ow8_A 229 YIKIYDVQHANLAGTLSGHA----------SWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCV 283 (321)
T ss_dssp CEEEEETTTCCEEEEECCCS----------SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred eEEEEECCCcceeEEEcCCC----------CceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEE
Confidence 99999999999988888876 789999999965 6999999999999999887543
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-37 Score=228.02 Aligned_cols=186 Identities=20% Similarity=0.359 Sum_probs=171.5
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
++.+|...+.+++|+|++++|+++ +.++.|++|++ ...+....+..+...+.+++|+|++++|++++.|+.|++
T Consensus 117 ~~~~~~~~~~~~~~spdg~~l~~g---~~dg~v~i~~~---~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~i 190 (321)
T 3ow8_A 117 SIDAGPVDAWTLAFSPDSQYLATG---THVGKVNIFGV---ESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINI 190 (321)
T ss_dssp EEECCTTCCCCEEECTTSSEEEEE---CTTSEEEEEET---TTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred EEeCCCccEEEEEECCCCCEEEEE---cCCCcEEEEEc---CCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEE
Confidence 356778889999999999999999 78999999999 455666777788889999999999999999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCCC
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDG 144 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg 144 (213)
||+++++.+..+.+|..+|.+++|+|++++|++++.|+.++ ..|.+++|+|++++|++++.|+
T Consensus 191 wd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~ 270 (321)
T 3ow8_A 191 FDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDK 270 (321)
T ss_dssp EETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCC
Confidence 99999999999999999999999999999999999999887 5699999999999999999999
Q ss_pred cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCC
Q psy7433 145 DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLP 203 (213)
Q Consensus 145 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~ 203 (213)
.|++||+++++++..+..|. ..|.+++|+|++ +|++++.|+.|++||.+
T Consensus 271 ~v~iwd~~~~~~~~~~~~h~----------~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 271 SVKVWDVGTRTCVHTFFDHQ----------DQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp CEEEEETTTTEEEEEECCCS----------SCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred cEEEEeCCCCEEEEEEcCCC----------CcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 99999999999999998876 789999999965 69999999999999974
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-37 Score=226.89 Aligned_cols=193 Identities=21% Similarity=0.315 Sum_probs=173.1
Q ss_pred ccccccCceEEEEEeCCC-CeEEEeeccCCCccEEEEeCCCc--ccccceeeeeeecCCceEEEEecCCCEEEEEcCCCc
Q psy7433 2 TYQCHNKITSDFVFLGSC-SLVATAGHSSESKNVCLWDSLLP--QKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGD 78 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~-~~l~~~g~~s~~~~i~iwd~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 78 (213)
+|++|.+.|++++|+|++ ++|+++ +.|++|++|++... .....+..+.+|...|.+++|+|++++|++++.|+.
T Consensus 12 ~l~gH~~~V~~l~~~~~~~~~l~s~---s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~ 88 (319)
T 3frx_A 12 TLEGHNGWVTSLATSAGQPNLLLSA---SRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKT 88 (319)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEE---ETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EEccccceEEEEEccCCCccEEEEe---cCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCE
Confidence 688999999999999965 799999 69999999998421 123456788899999999999999999999999999
Q ss_pred EEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee----------------eceEEEEEccC------Cce
Q psy7433 79 ICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----------------SPVKCLAIDPH------EEF 136 (213)
Q Consensus 79 v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------~~v~~~~~~~~------~~~ 136 (213)
|++||+++++.+..+.+|...|.+++|+|++..+++++.|+.++ ..+.++.|+|. +.+
T Consensus 89 v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~ 168 (319)
T 3frx_A 89 LRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVT 168 (319)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC------CCE
T ss_pred EEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCccE
Confidence 99999999999999999999999999999999999999999887 56889999985 448
Q ss_pred EEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCcc
Q psy7433 137 FVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 137 l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~ 207 (213)
+++++.|+.|++||+++.+....+.+|. ..|.+++|+|++ +|++++.||.|++||+.+++.
T Consensus 169 l~s~~~d~~i~~wd~~~~~~~~~~~~h~----------~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~ 230 (319)
T 3frx_A 169 IISAGNDKMVKAWNLNQFQIEADFIGHN----------SNINTLTASPDGTLIASAGKDGEIMLWNLAAKKA 230 (319)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCC----------SCEEEEEECTTSSEEEEEETTCEEEEEETTTTEE
T ss_pred EEEEeCCCEEEEEECCcchhheeecCCC----------CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 9999999999999999999888888876 789999999965 699999999999999988754
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-37 Score=235.60 Aligned_cols=190 Identities=22% Similarity=0.412 Sum_probs=176.0
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
++++|.+.|.+++|+|++++|+++ +.|++|++||+ ...+++..+.+|...|.+++|+|++++|++++.|+.|++
T Consensus 145 ~l~~h~~~V~~v~~~~~~~~l~sg---s~D~~i~iwd~---~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~ 218 (410)
T 1vyh_C 145 TLKGHTDSVQDISFDHSGKLLASC---SADMTIKLWDF---QGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKM 218 (410)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEE---ETTSCCCEEET---TSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEE
T ss_pred EEeccCCcEEEEEEcCCCCEEEEE---eCCCeEEEEeC---CCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEE
Confidence 578999999999999999999999 68999999999 566788888999999999999999999999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccC-----------
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPH----------- 133 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~----------- 133 (213)
||++++..+..+.+|...+.++.++|++.++++++.|+.++ ..|.+++|+|+
T Consensus 219 wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~ 298 (410)
T 1vyh_C 219 WEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATG 298 (410)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCS
T ss_pred EECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhcc
Confidence 99999999999999999999999999999999999999887 56899999996
Q ss_pred ---------CceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCC
Q psy7433 134 ---------EEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLP 203 (213)
Q Consensus 134 ---------~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~ 203 (213)
+.+|++|+.|+.|++||++++.++..+.+|. ..|.+++|+|++ +|++++.|+.|++||+.
T Consensus 299 ~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~----------~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~ 368 (410)
T 1vyh_C 299 SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD----------NWVRGVLFHSGGKFILSCADDKTLRVWDYK 368 (410)
T ss_dssp CC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCS----------SCEEEEEECSSSSCEEEEETTTEEEEECCT
T ss_pred ccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCC----------CcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 6689999999999999999999999998876 789999999965 69999999999999998
Q ss_pred CCcc
Q psy7433 204 DRDA 207 (213)
Q Consensus 204 ~~~~ 207 (213)
+++.
T Consensus 369 ~~~~ 372 (410)
T 1vyh_C 369 NKRC 372 (410)
T ss_dssp TSCC
T ss_pred CCce
Confidence 7654
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-37 Score=228.56 Aligned_cols=188 Identities=20% Similarity=0.278 Sum_probs=162.1
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCC-CEEEEEcCCCcEEE
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQH-QLLISAGKKGDICV 81 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~i 81 (213)
+.+|.+.|++++|+|++++|+++ +.|++|++||+ .+++.+..+.+|...|.+++|+|++ .+|++++.|+.|++
T Consensus 123 ~~~H~~~V~~v~~spdg~~l~sg---s~d~~i~iwd~---~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~i 196 (344)
T 4gqb_B 123 KYEHDDIVSTVSVLSSGTQAVSG---SKDICIKVWDL---AQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILL 196 (344)
T ss_dssp EECCSSCEEEEEECTTSSEEEEE---ETTSCEEEEET---TTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEE
T ss_pred ccCCCCCEEEEEECCCCCEEEEE---eCCCeEEEEEC---CCCcEEEEEcCcCCceEEEEecCCCCCceeeecccccccc
Confidence 45899999999999999999999 68999999999 5778888999999999999999987 57899999999999
Q ss_pred EeccCceEEEecc--cCCCCeeEEEecCC-CCEEEEecCCCcee-----------------eceEEEEEccCC-ceEEEe
Q psy7433 82 IDLRQRVIRSRFN--AHESPVKCLAIDPH-EEFFVTGAGDGDIK-----------------SPVKCLAIDPHE-EFFVTG 140 (213)
Q Consensus 82 wd~~~~~~~~~~~--~~~~~i~~~~~~~~-~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~-~~l~~~ 140 (213)
||+++++....+. .+...+.+++|+|+ +++|++++.|+.++ ..|++++|+|++ ++|++|
T Consensus 197 wd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasg 276 (344)
T 4gqb_B 197 WDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASL 276 (344)
T ss_dssp EETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEE
T ss_pred ccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEE
Confidence 9999998877764 34567899999995 56889999999886 789999999998 589999
Q ss_pred cCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC--eEEEEecCCcEEEEeCCCCcc
Q psy7433 141 AGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS--RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 141 ~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~~d~~i~iw~~~~~~~ 207 (213)
+.|+.|++||+++++.. .+.+|. ..|++++|+|++ .|++++.|+.|++|++.++..
T Consensus 277 s~D~~i~vwd~~~~~~~-~~~~H~----------~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 277 SEDCSLAVLDSSLSELF-RSQAHR----------DFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp ETTSCEEEECTTCCEEE-EECCCS----------SCEEEEEECSSSTTEEEEEETTSCEEEEECCC---
T ss_pred eCCCeEEEEECCCCcEE-EEcCCC----------CCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCCC
Confidence 99999999999988765 456665 789999999964 377999999999999987643
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-36 Score=223.43 Aligned_cols=191 Identities=18% Similarity=0.351 Sum_probs=174.0
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
++++|.+.|++++|+|++++|+++ +.|+.|++|++ ...+....+.+|...|.+++|+|++++|++++.|+.|++
T Consensus 18 ~~~gh~~~v~~~~~s~~~~~l~s~---~~dg~i~iw~~---~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~v 91 (312)
T 4ery_A 18 TLAGHTKAVSSVKFSPNGEWLASS---SADKLIKIWGA---YDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKI 91 (312)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEE---ETTSCEEEEET---TTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EEcccCCcEEEEEECCCCCEEEEe---eCCCeEEEEeC---CCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEE
Confidence 578999999999999999999999 68999999998 456677788899999999999999999999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCCC
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDG 144 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg 144 (213)
||+++++.+..+..|...+.+++|+|+++++++++.|+.++ .++.+++|+|+++++++++.||
T Consensus 92 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 171 (312)
T 4ery_A 92 WDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 171 (312)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC
Confidence 99999999999999999999999999999999999999886 6799999999999999999999
Q ss_pred cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCcc
Q psy7433 145 DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 145 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~ 207 (213)
.|++||+++++.+..+..+. ...+..++|+|++ +|++++.|+.|++||+.+++.
T Consensus 172 ~i~~wd~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 226 (312)
T 4ery_A 172 LCRIWDTASGQCLKTLIDDD---------NPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC 226 (312)
T ss_dssp CEEEEETTTCCEEEEECCSS---------CCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEE
T ss_pred cEEEEECCCCceeeEEeccC---------CCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcE
Confidence 99999999988877765443 2579999999965 689999999999999988753
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-37 Score=227.36 Aligned_cols=188 Identities=26% Similarity=0.289 Sum_probs=160.8
Q ss_pred ccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccce-eeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEec
Q psy7433 6 HNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALV-QAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDL 84 (213)
Q Consensus 6 h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~ 84 (213)
|...|.+++|+|++ .|+++ +.||+|+|||++..+..... ....+|...|++++|+|++++|++|+.|+.|++||+
T Consensus 81 ~~~~v~~~~~s~d~-~l~~~---s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~ 156 (344)
T 4gqb_B 81 TEAGVADLTWVGER-GILVA---SDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDL 156 (344)
T ss_dssp ESSCEEEEEEETTT-EEEEE---ETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred cCCCEEEEEEeCCC-eEEEE---ECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence 56789999999986 56676 58999999999533222221 234579999999999999999999999999999999
Q ss_pred cCceEEEecccCCCCeeEEEecCCCC-EEEEecCCCcee-------------------eceEEEEEccC-CceEEEecCC
Q psy7433 85 RQRVIRSRFNAHESPVKCLAIDPHEE-FFVTGAGDGDIK-------------------SPVKCLAIDPH-EEFFVTGAGD 143 (213)
Q Consensus 85 ~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~~~~i~-------------------~~v~~~~~~~~-~~~l~~~~~d 143 (213)
++++.+..+.+|...|.+++|+|++. .|++++.|+.++ ..+.+++|+|+ ++++++|+.|
T Consensus 157 ~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~d 236 (344)
T 4gqb_B 157 AQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDEN 236 (344)
T ss_dssp TTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETT
T ss_pred CCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccC
Confidence 99999999999999999999999875 789999999886 45889999995 5688999999
Q ss_pred CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC--eEEEEecCCcEEEEeCCCCcc
Q psy7433 144 GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS--RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 144 g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~~d~~i~iw~~~~~~~ 207 (213)
|.|++||+++++++..+.+|. ..|++++|+|++ +|++++.|+.|+|||+.+++.
T Consensus 237 g~v~~wd~~~~~~~~~~~~h~----------~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~ 292 (344)
T 4gqb_B 237 GTVSLVDTKSTSCVLSSAVHS----------QCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSEL 292 (344)
T ss_dssp SEEEEEESCC--CCEEEECCS----------SCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEE
T ss_pred CcEEEEECCCCcEEEEEcCCC----------CCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcE
Confidence 999999999999999998886 789999999964 589999999999999988753
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-37 Score=223.26 Aligned_cols=190 Identities=18% Similarity=0.266 Sum_probs=165.0
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec--CCCEEEEEcCCCcE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP--QHQLLISAGKKGDI 79 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~v 79 (213)
++.+|.+.|++++|+|+|++||++ +.|++|+|||++. ...+.+..+.+|...|.+++|++ ++++|++++.|+.|
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las~---s~D~~v~iw~~~~-~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v 79 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATC---SSDKTIKIFEVEG-ETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 79 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEE---ETTSCEEEEEBCS-SCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEE
T ss_pred eccCCcCceEEEEECCCCCEEEEE---eCCCEEEEEecCC-CCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEE
Confidence 578999999999999999999999 6899999999842 23467788899999999999986 48999999999999
Q ss_pred EEEeccCce--EEEecccCCCCeeEEEecCC--CCEEEEecCCCcee-------------------eceEEEEEccC---
Q psy7433 80 CVIDLRQRV--IRSRFNAHESPVKCLAIDPH--EEFFVTGAGDGDIK-------------------SPVKCLAIDPH--- 133 (213)
Q Consensus 80 ~iwd~~~~~--~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~~~~i~-------------------~~v~~~~~~~~--- 133 (213)
++||+++++ .+..+..|...|.+++|+|+ +..|++++.|+.++ ..|.+++|+|+
T Consensus 80 ~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 159 (297)
T 2pm7_B 80 MIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIE 159 (297)
T ss_dssp EEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC--
T ss_pred EEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCccc
Confidence 999998873 45567778999999999997 88999999999875 35789999997
Q ss_pred ----------CceEEEecCCCcEEEEEccCCe----eeeeecCCCCceeEEEecCCCeEEEEeCCC----CeEEEEecCC
Q psy7433 134 ----------EEFFVTGAGDGDIKVWSLSGNH----LLYNFPGEHARSSFFKHIGQGVTQLHVDGG----SRLFSCGADG 195 (213)
Q Consensus 134 ----------~~~l~~~~~dg~i~v~d~~~~~----~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~l~s~~~d~ 195 (213)
+++|++|+.|+.|++||+++++ ....+.+|. ..|.+++|+|+ .+|++++.|+
T Consensus 160 ~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~----------~~V~~v~~sp~~~~~~~las~s~D~ 229 (297)
T 2pm7_B 160 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS----------DWVRDVAWSPTVLLRSYMASVSQDR 229 (297)
T ss_dssp ----------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCS----------SCEEEEEECCCCSSSEEEEEEETTS
T ss_pred ccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCC----------CceEEEEECCCCCCceEEEEEECCC
Confidence 5699999999999999998755 556677775 78999999996 3699999999
Q ss_pred cEEEEeCCCC
Q psy7433 196 SMKVRQLPDR 205 (213)
Q Consensus 196 ~i~iw~~~~~ 205 (213)
.|++||+.+.
T Consensus 230 ~v~iWd~~~~ 239 (297)
T 2pm7_B 230 TCIIWTQDNE 239 (297)
T ss_dssp CEEEEEESST
T ss_pred cEEEEEeCCC
Confidence 9999999764
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-37 Score=227.73 Aligned_cols=189 Identities=18% Similarity=0.268 Sum_probs=163.2
Q ss_pred ccccccC-ceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEE
Q psy7433 2 TYQCHNK-ITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDIC 80 (213)
Q Consensus 2 ~l~~h~~-~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 80 (213)
+|++|.. .|++++|+|+|++||++ +.|+.|+|||++............+|...|.+++|+|++++|++++.|+.++
T Consensus 10 ~~~~h~~~~v~~l~~sp~g~~las~---~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~ 86 (345)
T 3fm0_A 10 RVPAHPDSRCWFLAWNPAGTLLASC---GGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTC 86 (345)
T ss_dssp EECCSTTSCEEEEEECTTSSCEEEE---ETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred eecCCCCCcEEEEEECCCCCEEEEE---cCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEE
Confidence 5788988 99999999999999999 6899999999842211111222357899999999999999999999999999
Q ss_pred EEeccCc--eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee--------------------eceEEEEEccCCceEE
Q psy7433 81 VIDLRQR--VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK--------------------SPVKCLAIDPHEEFFV 138 (213)
Q Consensus 81 iwd~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~--------------------~~v~~~~~~~~~~~l~ 138 (213)
+||+.++ +.+..+.+|...|.+++|+|++++|++++.|+.++ ..|.+++|+|++++|+
T Consensus 87 iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~ 166 (345)
T 3fm0_A 87 IWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLA 166 (345)
T ss_dssp EEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEE
T ss_pred EEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEE
Confidence 9999876 45778889999999999999999999999999886 4688999999999999
Q ss_pred EecCCCcEEEEEccCCe--eeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCC
Q psy7433 139 TGAGDGDIKVWSLSGNH--LLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLP 203 (213)
Q Consensus 139 ~~~~dg~i~v~d~~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~ 203 (213)
+++.|+.|++||++.++ +...+.+|. ..|.+++|+|++ +|++++.|+.|++|+..
T Consensus 167 s~s~d~~i~~w~~~~~~~~~~~~~~~h~----------~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~ 224 (345)
T 3fm0_A 167 SASYDDTVKLYREEEDDWVCCATLEGHE----------STVWSLAFDPSGQRLASCSDDRTVRIWRQY 224 (345)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEECCCS----------SCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred EEeCCCcEEEEEecCCCEEEEEEecCCC----------CceEEEEECCCCCEEEEEeCCCeEEEeccc
Confidence 99999999999998775 446677775 789999999965 69999999999999963
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-36 Score=225.45 Aligned_cols=190 Identities=21% Similarity=0.365 Sum_probs=168.1
Q ss_pred ccccccCceEEEEE-----eC-CCCeEEEeeccCCCccEEEEeCCCcc----cccceeeeeeecCCceEEEEecCCCEEE
Q psy7433 2 TYQCHNKITSDFVF-----LG-SCSLVATAGHSSESKNVCLWDSLLPQ----KKALVQAFVCHDQGASSLVFAPQHQLLI 71 (213)
Q Consensus 2 ~l~~h~~~v~~~~~-----~~-~~~~l~~~g~~s~~~~i~iwd~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 71 (213)
+|++|.+.|++++| ++ ++++|+++ +.|++|++||+.... .......+.+|...|.+++|+|++.+++
T Consensus 16 ~l~gH~~~V~~~~~~~s~~~~~d~~~l~sg---s~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~ 92 (343)
T 2xzm_R 16 ILEGHSDWVTSIVAGFSQKENEDSPVLISG---SRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAI 92 (343)
T ss_dssp EEECCSSCEEEEEECCCSSTTCCCCEEEEE---ETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEE
T ss_pred eeccchhhhhheeeEEEeecCCCCCEEEEE---cCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEE
Confidence 58899999999999 76 89999999 689999999985322 2345667889999999999999999999
Q ss_pred EEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-------------------eceEEEEEcc
Q psy7433 72 SAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-------------------SPVKCLAIDP 132 (213)
Q Consensus 72 ~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-------------------~~v~~~~~~~ 132 (213)
+++.|+.|++||+++++.+..+.+|...|.+++|+|++++|++++.|+.++ ..+.+++|+|
T Consensus 93 s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~ 172 (343)
T 2xzm_R 93 SSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSP 172 (343)
T ss_dssp EEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECC
T ss_pred EEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeecc
Confidence 999999999999999999999999999999999999999999999999886 3589999999
Q ss_pred CC----------ceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEe
Q psy7433 133 HE----------EFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQ 201 (213)
Q Consensus 133 ~~----------~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~ 201 (213)
++ .++++++.|+.|++|| ...+....+..|. ..|.+++|+|++ +|++++.|+.|++||
T Consensus 173 ~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~----------~~v~~~~~s~~g~~l~sgs~dg~v~iwd 241 (343)
T 2xzm_R 173 IMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHE----------SNVNHLSISPNGKYIATGGKDKKLLIWD 241 (343)
T ss_dssp CCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCS----------SCEEEEEECTTSSEEEEEETTCEEEEEE
T ss_pred ccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCcc----------ccceEEEECCCCCEEEEEcCCCeEEEEE
Confidence 87 7899999999999999 4556666777765 789999999975 699999999999999
Q ss_pred CCCC
Q psy7433 202 LPDR 205 (213)
Q Consensus 202 ~~~~ 205 (213)
+.+.
T Consensus 242 ~~~~ 245 (343)
T 2xzm_R 242 ILNL 245 (343)
T ss_dssp SSCC
T ss_pred CCCC
Confidence 9544
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-36 Score=227.05 Aligned_cols=183 Identities=21% Similarity=0.348 Sum_probs=168.5
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
.+.+|.+.|.++.|+|++. ++++ +.|+.|++||+ .+.+.+..+.+|...|.+++|+|+++++++|+.|+.|++
T Consensus 138 ~~~~h~~~v~~~~~~~~~~-l~s~---s~d~~i~~wd~---~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~ 210 (340)
T 1got_B 138 ELAGHTGYLSCCRFLDDNQ-IVTS---SGDTTCALWDI---ETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKL 210 (340)
T ss_dssp EEECCSSCEEEEEEEETTE-EEEE---ETTSCEEEEET---TTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred EecCCCccEEEEEECCCCc-EEEE---ECCCcEEEEEC---CCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEE
Confidence 3568999999999998876 6666 58999999999 566778888899999999999999999999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-------------------eceEEEEEccCCceEEEecC
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-------------------SPVKCLAIDPHEEFFVTGAG 142 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-------------------~~v~~~~~~~~~~~l~~~~~ 142 (213)
||+++++....+.+|...|.+++|+|+++.|++++.|+.++ ..|.+++|+|++++|++|+.
T Consensus 211 wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~ 290 (340)
T 1got_B 211 WDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYD 290 (340)
T ss_dssp EETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEET
T ss_pred EECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECC
Confidence 99999999999999999999999999999999999999886 36899999999999999999
Q ss_pred CCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEe
Q psy7433 143 DGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQ 201 (213)
Q Consensus 143 dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~ 201 (213)
|+.|++||+++++.+..+.+|. ..|.+++|+|++ +|++++.|+.|++||
T Consensus 291 d~~i~vwd~~~~~~~~~~~~h~----------~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 291 DFNCNVWDALKADRAGVLAGHD----------NRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp TSEEEEEETTTCCEEEEEECCS----------SCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCeEEEEEcccCcEeeEeecCC----------CcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 9999999999999988888886 789999999976 599999999999997
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-36 Score=224.77 Aligned_cols=189 Identities=19% Similarity=0.322 Sum_probs=171.1
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
+|++|.+.|++++|+|++++|+++ +.|+.|++||+ .+...+..+..|...|.+++|+|++++|++++.|+.+++
T Consensus 50 ~l~gH~~~v~~~~~s~d~~~l~s~---s~Dg~v~iWd~---~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~i 123 (340)
T 1got_B 50 TLRGHLAKIYAMHWGTDSRLLLSA---SQDGKLIIWDS---YTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSI 123 (340)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEE---ETTTEEEEEET---TTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEE
T ss_pred eecCCCCceEEEEECCCCCEEEEE---eCCCcEEEEEC---CCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEE
Confidence 578999999999999999999999 68999999998 566677888889999999999999999999999999999
Q ss_pred EeccCc----eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEe
Q psy7433 82 IDLRQR----VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTG 140 (213)
Q Consensus 82 wd~~~~----~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~ 140 (213)
||+.+. .....+.+|...+.++.|++++. +++++.|+.++ ..|.+++|+|+++++++|
T Consensus 124 w~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg 202 (340)
T 1got_B 124 YNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSG 202 (340)
T ss_dssp EETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred EECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEE
Confidence 999865 45567788999999999998765 88999999886 579999999999999999
Q ss_pred cCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCcc
Q psy7433 141 AGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 141 ~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~ 207 (213)
+.|+.|++||++++.....+..|. ..|.+++|+|++ .|++++.|+.|++||+++++.
T Consensus 203 ~~d~~v~~wd~~~~~~~~~~~~h~----------~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~ 260 (340)
T 1got_B 203 ACDASAKLWDVREGMCRQTFTGHE----------SDINAICFFPNGNAFATGSDDATCRLFDLRADQE 260 (340)
T ss_dssp ETTSCEEEEETTTCSEEEEECCCS----------SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred eCCCcEEEEECCCCeeEEEEcCCc----------CCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcE
Confidence 999999999999999998888876 789999999965 699999999999999987654
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-36 Score=225.35 Aligned_cols=183 Identities=23% Similarity=0.336 Sum_probs=169.4
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec--CCCEEEEEcCCCcEE
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP--QHQLLISAGKKGDIC 80 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~v~ 80 (213)
+.+|.+.|.+++|+|++..|+++ +.|++|++||+ .+.+.+..+.+|...|.+++|+| ++++|++|+.||.|+
T Consensus 150 ~~~h~~~v~~~~~~~~~~~l~t~---s~D~~v~lwd~---~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~ 223 (354)
T 2pbi_B 150 VAMHTNYLSACSFTNSDMQILTA---SGDGTCALWDV---ESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAM 223 (354)
T ss_dssp EEECSSCEEEEEECSSSSEEEEE---ETTSEEEEEET---TTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEE
T ss_pred eeccCCcEEEEEEeCCCCEEEEE---eCCCcEEEEeC---CCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEE
Confidence 56799999999999999999999 68999999999 56778888999999999999987 568999999999999
Q ss_pred EEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-------------------eceEEEEEccCCceEEEec
Q psy7433 81 VIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-------------------SPVKCLAIDPHEEFFVTGA 141 (213)
Q Consensus 81 iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-------------------~~v~~~~~~~~~~~l~~~~ 141 (213)
+||+++++.+..+..|...|.+++|+|++..|++++.|+.++ ..+.+++|+|++++|++|+
T Consensus 224 ~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~ 303 (354)
T 2pbi_B 224 VWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGY 303 (354)
T ss_dssp EEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEE
T ss_pred EEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEE
Confidence 999999999999999999999999999999999999999887 2578999999999999999
Q ss_pred CCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEe
Q psy7433 142 GDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQ 201 (213)
Q Consensus 142 ~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~ 201 (213)
.|+.|++||+++++.+..+.+|. ..|.+++|+|++ +|++++.|+.|++|+
T Consensus 304 ~d~~i~vwd~~~~~~~~~l~~h~----------~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 304 NDYTINVWDVLKGSRVSILFGHE----------NRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp TTSCEEEEETTTCSEEEEECCCS----------SCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred CCCcEEEEECCCCceEEEEECCC----------CcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 99999999999999888888876 789999999975 699999999999996
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-36 Score=222.11 Aligned_cols=196 Identities=22% Similarity=0.292 Sum_probs=164.6
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
++++|.+.|.+++|+|++++|+++ +.|+.|++||++.......+..+..|...|.+++|+|++++|++++.|+.|++
T Consensus 100 ~~~~h~~~v~~v~~sp~~~~l~s~---s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~ 176 (345)
T 3fm0_A 100 TLEGHENEVKSVAWAPSGNLLATC---SRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKL 176 (345)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEE---ETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEE
T ss_pred EccCCCCCceEEEEeCCCCEEEEE---ECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEE
Confidence 477999999999999999999999 68999999999654445567778889999999999999999999999999999
Q ss_pred EeccCce--EEEecccCCCCeeEEEecCCCCEEEEecCCCcee---------------------------------eceE
Q psy7433 82 IDLRQRV--IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK---------------------------------SPVK 126 (213)
Q Consensus 82 wd~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~---------------------------------~~v~ 126 (213)
||.++++ ....+.+|...|.+++|+|++++|++++.|+.++ ..|.
T Consensus 177 w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 256 (345)
T 3fm0_A 177 YREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIY 256 (345)
T ss_dssp EEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEE
T ss_pred EEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEE
Confidence 9998875 4467888999999999999999999999999886 2478
Q ss_pred EEEEccCCceEEEecCCCcEEEEEccCCee---------eeeecCCCCceeEEEecCCCeEEEEeCCCC--eEEEEecCC
Q psy7433 127 CLAIDPHEEFFVTGAGDGDIKVWSLSGNHL---------LYNFPGEHARSSFFKHIGQGVTQLHVDGGS--RLFSCGADG 195 (213)
Q Consensus 127 ~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~---------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~~d~ 195 (213)
+++|+|++..|++++.|+.|++|+...... .....+| ...|++++|+|++ .|++++.||
T Consensus 257 ~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h----------~~~V~~v~~~p~~~~~laS~s~Dg 326 (345)
T 3fm0_A 257 DIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAH----------SQDVNCVAWNPKEPGLLASCSDDG 326 (345)
T ss_dssp EEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSS----------SSCEEEEEECSSSTTEEEEEETTS
T ss_pred EEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccc----------cCcEeEeEEeCCCceEEEEcCCCC
Confidence 899999999999999999999999865421 1112233 3789999999963 699999999
Q ss_pred cEEEEeCCCCccccc
Q psy7433 196 SMKVRQLPDRDAVVH 210 (213)
Q Consensus 196 ~i~iw~~~~~~~~~~ 210 (213)
.|++|++.+++.+.+
T Consensus 327 ~v~~W~~~~~~~~~~ 341 (345)
T 3fm0_A 327 EVAFWKYQRPEGLHH 341 (345)
T ss_dssp CEEEEEECC------
T ss_pred cEEEEEecCCCCccc
Confidence 999999998876543
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=222.55 Aligned_cols=188 Identities=18% Similarity=0.341 Sum_probs=161.1
Q ss_pred ccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCC-EEEEEcCCCcEEEE
Q psy7433 4 QCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQ-LLISAGKKGDICVI 82 (213)
Q Consensus 4 ~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~iw 82 (213)
.+|.+.|++++|+|++++|+++ +.|+.|++||+ .+.+.+..+.+|...|.+++|+|++. ++++++.|+.|++|
T Consensus 136 ~~h~~~V~~v~~spdg~~l~sg---s~dg~v~iwd~---~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~w 209 (357)
T 4g56_B 136 YEHDDIVKTLSVFSDGTQAVSG---GKDFSVKVWDL---SQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLW 209 (357)
T ss_dssp CCCSSCEEEEEECSSSSEEEEE---ETTSCEEEEET---TTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEEC
T ss_pred CCCCCCEEEEEECCCCCEEEEE---eCCCeEEEEEC---CCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEE
Confidence 4799999999999999999999 68999999999 56778888899999999999999874 78999999999999
Q ss_pred eccCceEEEecc--cCCCCeeEEEecCC-CCEEEEecCCCcee-----------------eceEEEEEccCC-ceEEEec
Q psy7433 83 DLRQRVIRSRFN--AHESPVKCLAIDPH-EEFFVTGAGDGDIK-----------------SPVKCLAIDPHE-EFFVTGA 141 (213)
Q Consensus 83 d~~~~~~~~~~~--~~~~~i~~~~~~~~-~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~-~~l~~~~ 141 (213)
|+++++....+. .+...+.+++|+|+ +.+|++++.|+.++ ..|.+++|+|++ ++|++|+
T Consensus 210 d~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs 289 (357)
T 4g56_B 210 DTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASIS 289 (357)
T ss_dssp CTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEE
T ss_pred ECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEe
Confidence 999987665543 46678999999997 46888999999886 789999999987 5899999
Q ss_pred CCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCC-C-CeEEEEecCCcEEEEeCCCCccc
Q psy7433 142 GDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG-G-SRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 142 ~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~-~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
.|+.|+|||+++++.+..+ +|. ..|++++|+| + .+|++++.||.|++|++.+..+.
T Consensus 290 ~D~~i~iwd~~~~~~~~~~-~H~----------~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~~ 347 (357)
T 4g56_B 290 EDCTVAVLDADFSEVFRDL-SHR----------DFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGRT 347 (357)
T ss_dssp TTSCEEEECTTSCEEEEEC-CCS----------SCEEEEEECSSSTTEEEEEETTSCEEEEECC-----
T ss_pred CCCEEEEEECCCCcEeEEC-CCC----------CCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcc
Confidence 9999999999998887655 554 7899999998 4 46999999999999999865443
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-36 Score=221.51 Aligned_cols=189 Identities=19% Similarity=0.253 Sum_probs=158.1
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec--CCCEEEEEcCCCcE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP--QHQLLISAGKKGDI 79 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~v 79 (213)
++.+|.+.|++++|+|+|++||++ +.|++|++||++.. ....+..+.+|...|.+++|+| ++++|++++.|+.|
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasg---s~D~~v~lwd~~~~-~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v 83 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATC---SSDRSVKIFDVRNG-GQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKV 83 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEE---ETTTEEEEEEEETT-EEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCE
T ss_pred ecccccCeEEEeeEcCCCCEEEEE---eCCCeEEEEEecCC-CcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEE
Confidence 567999999999999999999999 68999999998421 1235677889999999999986 48999999999999
Q ss_pred EEEeccCc--eEEEecccCCCCeeEEEecCC--CCEEEEecCCCcee--------------------eceEEEEEccC--
Q psy7433 80 CVIDLRQR--VIRSRFNAHESPVKCLAIDPH--EEFFVTGAGDGDIK--------------------SPVKCLAIDPH-- 133 (213)
Q Consensus 80 ~iwd~~~~--~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~~~~i~--------------------~~v~~~~~~~~-- 133 (213)
++||++++ +....+.+|...|.+++|+|+ +.+|++++.|+.++ ..+.+++|+|+
T Consensus 84 ~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 163 (316)
T 3bg1_A 84 IIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVV 163 (316)
T ss_dssp EEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCC
T ss_pred EEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccC
Confidence 99999987 456677889999999999997 78999999999776 34678899997
Q ss_pred ---------------CceEEEecCCCcEEEEEccCC---eeeeeecCCCCceeEEEecCCCeEEEEeCCC-----CeEEE
Q psy7433 134 ---------------EEFFVTGAGDGDIKVWSLSGN---HLLYNFPGEHARSSFFKHIGQGVTQLHVDGG-----SRLFS 190 (213)
Q Consensus 134 ---------------~~~l~~~~~dg~i~v~d~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~~l~s 190 (213)
+++|++|+.|+.|++||++.. +++..+.+|. ..|.+++|+|+ ..|++
T Consensus 164 ~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~----------~~V~~v~~sp~~~~~~~~las 233 (316)
T 3bg1_A 164 PGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHS----------DWVRDVAWAPSIGLPTSTIAS 233 (316)
T ss_dssp C------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCS----------SCEEEEECCCCSSCSCCEEEE
T ss_pred CccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCC----------CceEEEEecCCCCCCCceEEE
Confidence 468999999999999999754 4666777776 78999999996 46999
Q ss_pred EecCCcEEEEeCCC
Q psy7433 191 CGADGSMKVRQLPD 204 (213)
Q Consensus 191 ~~~d~~i~iw~~~~ 204 (213)
++.|+.|++|++.+
T Consensus 234 ~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 234 CSQDGRVFIWTCDD 247 (316)
T ss_dssp EETTCEEEEEECSS
T ss_pred EcCCCeEEEEEccC
Confidence 99999999999876
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-35 Score=221.45 Aligned_cols=186 Identities=12% Similarity=0.107 Sum_probs=153.9
Q ss_pred ccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEecc
Q psy7433 6 HNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLR 85 (213)
Q Consensus 6 h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~ 85 (213)
+...+++++|+|||+++++++. +.|++|+|||+ .+.+.+..+. |...|.+++|+|++++|++++.+ .+.+|+..
T Consensus 132 ~~~~~~~v~fSpDg~~la~as~-~~d~~i~iwd~---~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~ 205 (365)
T 4h5i_A 132 ADDYTKLVYISREGTVAAIASS-KVPAIMRIIDP---SDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTV 205 (365)
T ss_dssp TTCCEEEEEECTTSSCEEEEES-CSSCEEEEEET---TTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSS-CEEEEETT
T ss_pred cccCEEEEEEcCCCCEEEEEEC-CCCCEEEEeEC---CCCcEEEEeC-CCCceEEEEEccCCceEEeccce-eEEEEEec
Confidence 4456899999999999875531 57999999999 4556666654 77889999999999999999865 56667666
Q ss_pred CceEEE--ecccCCCCeeEEEecCCCCEEEEecCCCc----ee---------------------eceEEEEEccCCceEE
Q psy7433 86 QRVIRS--RFNAHESPVKCLAIDPHEEFFVTGAGDGD----IK---------------------SPVKCLAIDPHEEFFV 138 (213)
Q Consensus 86 ~~~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~~~~----i~---------------------~~v~~~~~~~~~~~l~ 138 (213)
+++.+. ....|...+.+++|+|+++.+++++.++. +. ..|++++|+|+|++|+
T Consensus 206 ~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~la 285 (365)
T 4h5i_A 206 TGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAV 285 (365)
T ss_dssp TCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEE
T ss_pred cCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceE
Confidence 665443 33457788999999999999999988763 21 5689999999999999
Q ss_pred EecCCCcEEEEEccCCeeeeee-cCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCcc
Q psy7433 139 TGAGDGDIKVWSLSGNHLLYNF-PGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 139 ~~~~dg~i~v~d~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~ 207 (213)
+|+.|+.|+|||+++++++..+ .+|. ..|++++|+|++ +|+|++.|++|+||+++....
T Consensus 286 sgs~D~~V~iwd~~~~~~~~~~~~gH~----------~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~~~ 346 (365)
T 4h5i_A 286 LASNDNSIALVKLKDLSMSKIFKQAHS----------FAITEVTISPDSTYVASVSAANTIHIIKLPLNYA 346 (365)
T ss_dssp EEETTSCEEEEETTTTEEEEEETTSSS----------SCEEEEEECTTSCEEEEEETTSEEEEEECCTTTT
T ss_pred EEcCCCEEEEEECCCCcEEEEecCccc----------CCEEEEEECCCCCEEEEEeCCCeEEEEEcCCCCc
Confidence 9999999999999999999875 5665 789999999976 599999999999999976543
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-35 Score=217.60 Aligned_cols=189 Identities=18% Similarity=0.266 Sum_probs=156.8
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcc----cccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEE
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQ----KKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDIC 80 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 80 (213)
+|.+.|++++|+|++++|+++ +.|++|++||++... ....+..+.+|...|.+++|+|++++|++++.|+.|+
T Consensus 56 ~h~~~v~~v~~sp~~~~las~---s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~ 132 (330)
T 2hes_X 56 AHKKAIRSVAWRPHTSLLAAG---SFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVW 132 (330)
T ss_dssp CCCSCEEEEEECTTSSEEEEE---ETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEE
T ss_pred CccCCEEEEEECCCCCEEEEE---eCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEE
Confidence 399999999999999999999 689999999984321 2345667889999999999999999999999999999
Q ss_pred EEeccC----ceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-------------------eceEEEEEccC--Cc
Q psy7433 81 VIDLRQ----RVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-------------------SPVKCLAIDPH--EE 135 (213)
Q Consensus 81 iwd~~~----~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-------------------~~v~~~~~~~~--~~ 135 (213)
+||++. .+.+..+.+|...|.+++|+|++.+|++++.|+.++ ..|.+++|+|+ +.
T Consensus 133 iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 212 (330)
T 2hes_X 133 IWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVF 212 (330)
T ss_dssp EEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSC
T ss_pred EEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCee
Confidence 999953 256677888999999999999999999999999886 56889999998 66
Q ss_pred eEEEecCCCcEEEEEccCC--------eeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCC
Q psy7433 136 FFVTGAGDGDIKVWSLSGN--------HLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 136 ~l~~~~~dg~i~v~d~~~~--------~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 205 (213)
+|++++.|+.|++||++.+ .....+... +...|.+++|++++.|++++.||.|++|+..++
T Consensus 213 ~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~---------h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~ 281 (330)
T 2hes_X 213 RLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDV---------HKRQVYNVAWGFNGLIASVGADGVLAVYEEVDG 281 (330)
T ss_dssp EEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSC---------CSSCEEEEEECTTSCEEEEETTSCEEEEEEETT
T ss_pred EEEEEeCCCeEEEEEecCCCccccceeEEeeecccc---------cccceEEEEEcCCCEEEEEeCCCEEEEEEcCCC
Confidence 8999999999999999754 233334331 237899999999889999999999999998765
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-35 Score=219.34 Aligned_cols=190 Identities=17% Similarity=0.264 Sum_probs=168.7
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
+|++|.+.|++++|+|++++|+++ +.|++|++||. .+.+....+..|...|.+++|+|++++|++++.|+.+++
T Consensus 59 ~l~gH~~~V~~~~~s~d~~~l~s~---s~Dg~v~vWd~---~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v 132 (354)
T 2pbi_B 59 TLKGHGNKVLCMDWCKDKRRIVSS---SQDGKVIVWDS---FTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSV 132 (354)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEE---ETTSEEEEEET---TTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEE
T ss_pred EecCCCCeEEEEEECCCCCEEEEE---eCCCeEEEEEC---CCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEE
Confidence 578999999999999999999999 68999999998 456666777788899999999999999999999999999
Q ss_pred EeccCc------eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEcc--CCce
Q psy7433 82 IDLRQR------VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDP--HEEF 136 (213)
Q Consensus 82 wd~~~~------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~--~~~~ 136 (213)
|++... .....+..|...+.+++|+|++..|++++.|+.++ ..|.+++|+| ++++
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~ 212 (354)
T 2pbi_B 133 YPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNT 212 (354)
T ss_dssp EECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCE
T ss_pred EEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCE
Confidence 998643 23445667999999999999999999999999886 5688899987 4689
Q ss_pred EEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCcc
Q psy7433 137 FVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 137 l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~ 207 (213)
|++|+.||.|++||+++++++..+..|. ..|++++|+|++ .|++++.|+.|++||++....
T Consensus 213 l~sgs~Dg~v~~wd~~~~~~~~~~~~h~----------~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~ 274 (354)
T 2pbi_B 213 FVSGGCDKKAMVWDMRSGQCVQAFETHE----------SDVNSVRYYPSGDAFASGSDDATCRLYDLRADRE 274 (354)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCCS----------SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred EEEEeCCCeEEEEECCCCcEEEEecCCC----------CCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 9999999999999999999999988876 789999999964 699999999999999987643
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-35 Score=220.05 Aligned_cols=190 Identities=22% Similarity=0.283 Sum_probs=160.1
Q ss_pred ccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccc-eeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEE
Q psy7433 4 QCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKAL-VQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVI 82 (213)
Q Consensus 4 ~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iw 82 (213)
.+|...|.+++|+|++.+++++ .|++|+|||+...+.... .....+|...|.+++|+|++++|++++.|+.|++|
T Consensus 91 ~~~~~~V~~~~~s~d~~~l~~s----~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iw 166 (357)
T 4g56_B 91 VQTEAGVTDVAWVSEKGILVAS----DSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVW 166 (357)
T ss_dssp EECSSCEEEEEEETTTEEEEEE----TTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEE
T ss_pred CCCCCCEEEEEEcCCCCEEEEE----CCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 4688899999999998777654 799999999953322211 12344788999999999999999999999999999
Q ss_pred eccCceEEEecccCCCCeeEEEecCCCC-EEEEecCCCcee-------------------eceEEEEEccCC-ceEEEec
Q psy7433 83 DLRQRVIRSRFNAHESPVKCLAIDPHEE-FFVTGAGDGDIK-------------------SPVKCLAIDPHE-EFFVTGA 141 (213)
Q Consensus 83 d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~~~~i~-------------------~~v~~~~~~~~~-~~l~~~~ 141 (213)
|+++++.+..+..|...|.+++|+|++. .+++++.|+.++ ..+.+++|+|++ .+|++|+
T Consensus 167 d~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~ 246 (357)
T 4g56_B 167 DLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGD 246 (357)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEE
T ss_pred ECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEee
Confidence 9999999999999999999999999875 789999999886 568999999985 5889999
Q ss_pred CCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC--eEEEEecCCcEEEEeCCCCcc
Q psy7433 142 GDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS--RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 142 ~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~~d~~i~iw~~~~~~~ 207 (213)
.|+.|++||+++++.+..+..+. ..|++++|+|++ +|++++.|+.|+|||+.+++.
T Consensus 247 ~d~~i~~wd~~~~~~~~~~~~~~----------~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~ 304 (357)
T 4g56_B 247 ETGNVSLVNIKNPDSAQTSAVHS----------QNITGLAYSYHSSPFLASISEDCTVAVLDADFSEV 304 (357)
T ss_dssp SSSCEEEEESSCGGGCEEECCCS----------SCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEE
T ss_pred cccceeEEECCCCcEeEEEeccc----------eeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcE
Confidence 99999999999999998888876 789999999854 589999999999999988754
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-35 Score=215.60 Aligned_cols=188 Identities=18% Similarity=0.261 Sum_probs=157.7
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeee-ee-ecCCceEEEEecCCCEEEEEcCCCcE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAF-VC-HDQGASSLVFAPQHQLLISAGKKGDI 79 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~-~~-~~~~v~~~~~~~~~~~l~~~~~d~~v 79 (213)
+|++|.++|++++|+|+ +||++ +.|+.|++||++.. ....+..+ .. |...|.+++|+|++++|++++.|+.|
T Consensus 9 ~~~~h~~~v~~~~~s~~--~las~---~~D~~i~lw~~~~~-~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v 82 (330)
T 2hes_X 9 SLKLYKEKIWSFDFSQG--ILATG---STDRKIKLVSVKYD-DFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTV 82 (330)
T ss_dssp EEECCSSCEEEEEEETT--EEEEE---ESSSCEEEEECSSS-CCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCE
T ss_pred eeccCCCceeeeccCCC--EEEEE---cCCCEEEEEEecCC-CeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcE
Confidence 57899999999999987 89998 68999999998532 12334444 33 88999999999999999999999999
Q ss_pred EEEeccC-------ceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee---------------------eceEEEEEc
Q psy7433 80 CVIDLRQ-------RVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK---------------------SPVKCLAID 131 (213)
Q Consensus 80 ~iwd~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~---------------------~~v~~~~~~ 131 (213)
++||++. .+.+..+.+|...|.+++|+|++++|++++.|+.++ ..|.+++|+
T Consensus 83 ~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~ 162 (330)
T 2hes_X 83 SIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWH 162 (330)
T ss_dssp EEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEEC
T ss_pred EEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEEC
Confidence 9999853 356677888999999999999999999999999876 468899999
Q ss_pred cCCceEEEecCCCcEEEEEccCC--eeeeeecCCCCceeEEEecCCCeEEEEeCCC--C-eEEEEecCCcEEEEeCCCC
Q psy7433 132 PHEEFFVTGAGDGDIKVWSLSGN--HLLYNFPGEHARSSFFKHIGQGVTQLHVDGG--S-RLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 132 ~~~~~l~~~~~dg~i~v~d~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~-~l~s~~~d~~i~iw~~~~~ 205 (213)
|++++|++++.|+.|++||.+.+ +++..+.+|. ..|.+++|+|+ + +|++++.|+.|++||+..+
T Consensus 163 p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~----------~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~ 231 (330)
T 2hes_X 163 PSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHE----------GTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGD 231 (330)
T ss_dssp SSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCS----------SCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEE
T ss_pred CCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCC----------CcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCC
Confidence 99999999999999999999866 5777788776 78999999986 3 5899999999999998653
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=215.31 Aligned_cols=191 Identities=19% Similarity=0.311 Sum_probs=155.7
Q ss_pred ccccccCceEEEEEeCC-CCeEEEeeccCCCccEEEEeCCCccc--ccceeeeeeecCCceEEEEecCCCEEEEEcCCCc
Q psy7433 2 TYQCHNKITSDFVFLGS-CSLVATAGHSSESKNVCLWDSLLPQK--KALVQAFVCHDQGASSLVFAPQHQLLISAGKKGD 78 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~-~~~l~~~g~~s~~~~i~iwd~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 78 (213)
+|+||.+.|++++|+|+ +++||++ +.|++|+|||++.... ..+...+.+|...|.+++|+|++++|++++.|+.
T Consensus 33 tL~GH~~~V~~v~~sp~~~~~l~S~---s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~ 109 (340)
T 4aow_A 33 TLKGHNGWVTQIATTPQFPDMILSA---SRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGT 109 (340)
T ss_dssp EECCCSSCEEEEEECTTCTTEEEEE---ETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EECCccCCEEEEEEeCCCCCEEEEE---cCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEccccc
Confidence 68999999999999997 6899999 6899999999854322 2356678889999999999999999999999999
Q ss_pred EEEEeccCceEEEecccCCCCeeEEEecCCCCEEE---------------------------------------------
Q psy7433 79 ICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFV--------------------------------------------- 113 (213)
Q Consensus 79 v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~--------------------------------------------- 113 (213)
|++|+............+...+....+++++..|+
T Consensus 110 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 189 (340)
T 4aow_A 110 LRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIV 189 (340)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEE
T ss_pred ceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEE
Confidence 99999987655444444444444444444444444
Q ss_pred EecCCCcee-----------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCC
Q psy7433 114 TGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQG 176 (213)
Q Consensus 114 ~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (213)
+++.|+.++ ..|.+++|+|++++|++|+.|+.|++||+++.+.+..+..+ ..
T Consensus 190 s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~-----------~~ 258 (340)
T 4aow_A 190 SCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-----------DI 258 (340)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECS-----------SC
T ss_pred EEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCC-----------ce
Confidence 444444443 57899999999999999999999999999999998888765 57
Q ss_pred eEEEEeCCCCeEEEEecCCcEEEEeCCCCc
Q psy7433 177 VTQLHVDGGSRLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 177 v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~ 206 (213)
|.++.|+|++.+++++.|+.|++||+.+..
T Consensus 259 v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~ 288 (340)
T 4aow_A 259 INALCFSPNRYWLCAATGPSIKIWDLEGKI 288 (340)
T ss_dssp EEEEEECSSSSEEEEEETTEEEEEETTTTE
T ss_pred EEeeecCCCCceeeccCCCEEEEEECCCCe
Confidence 999999999999999999999999998764
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=215.02 Aligned_cols=194 Identities=16% Similarity=0.232 Sum_probs=165.4
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcc-cccceeeeeeecCCceEEEEec--CCCEEEEEcCCCc
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQ-KKALVQAFVCHDQGASSLVFAP--QHQLLISAGKKGD 78 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~-~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~ 78 (213)
.+++|.+.|++++|+|++++|+++ +.|+.|++||++... .......+.+|...|.+++|+| ++++|++++.||.
T Consensus 6 ~~~gH~~~v~~~~~~~~~~~l~~~---~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~ 82 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFYGRHVATC---SSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKT 82 (351)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEE---ETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred cCcccccceeEEEEcCCCCEEEEe---eCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCe
Confidence 467999999999999999999999 689999999985321 1246677788999999999999 6999999999999
Q ss_pred EEEEeccCc---------eEEEecccCCCCeeEEEecCC--CCEEEEecCCCcee-------------------------
Q psy7433 79 ICVIDLRQR---------VIRSRFNAHESPVKCLAIDPH--EEFFVTGAGDGDIK------------------------- 122 (213)
Q Consensus 79 v~iwd~~~~---------~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~~~~i~------------------------- 122 (213)
|++||++++ +.+..+..|...+.+++|+|+ +.++++++.|+.++
T Consensus 83 v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 162 (351)
T 3f3f_A 83 VKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIP 162 (351)
T ss_dssp EEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCC
T ss_pred EEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccc
Confidence 999999886 567788889999999999999 99999999988654
Q ss_pred ----------------------------------------------------eceEEEEEccCC----ceEEEecCCCcE
Q psy7433 123 ----------------------------------------------------SPVKCLAIDPHE----EFFVTGAGDGDI 146 (213)
Q Consensus 123 ----------------------------------------------------~~v~~~~~~~~~----~~l~~~~~dg~i 146 (213)
..|.+++|+|++ ++|++++.||.|
T Consensus 163 ~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i 242 (351)
T 3f3f_A 163 PANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRI 242 (351)
T ss_dssp CSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCE
T ss_pred cCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeE
Confidence 357899999998 899999999999
Q ss_pred EEEEccCC----------------------------------------------eeeeeecCCCCceeEEEecCCCeEEE
Q psy7433 147 KVWSLSGN----------------------------------------------HLLYNFPGEHARSSFFKHIGQGVTQL 180 (213)
Q Consensus 147 ~v~d~~~~----------------------------------------------~~~~~~~~~~~~~~~~~~~~~~v~~~ 180 (213)
++||++.+ +.+..+.+| ...|+++
T Consensus 243 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h----------~~~v~~~ 312 (351)
T 3f3f_A 243 RIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDH----------NGEVWSV 312 (351)
T ss_dssp EEEEEEECC---------------------------------------CCSEEEEEEEEECTT----------SSCEEEE
T ss_pred EEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecc----------cccEEEE
Confidence 99999864 333334443 4789999
Q ss_pred EeCCCC-eEEEEecCCcEEEEeCCCCccc
Q psy7433 181 HVDGGS-RLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 181 ~~~~~~-~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
+|+|++ +|++++.||.|++|++.+++..
T Consensus 313 ~~s~~~~~l~s~~~dg~v~iw~~~~~~~~ 341 (351)
T 3f3f_A 313 SWNLTGTILSSAGDDGKVRLWKATYSNEF 341 (351)
T ss_dssp EECSSSCCEEEEETTSCEEEEEECTTSCE
T ss_pred EEcCCCCEEEEecCCCcEEEEecCcCcch
Confidence 999965 6999999999999999987543
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-35 Score=235.38 Aligned_cols=194 Identities=23% Similarity=0.346 Sum_probs=173.3
Q ss_pred ccccccCceEEEEEeCCC-CeEEEeeccCCCccEEEEeCCCccc--ccceeeeeeecCCceEEEEecCCCEEEEEcCCCc
Q psy7433 2 TYQCHNKITSDFVFLGSC-SLVATAGHSSESKNVCLWDSLLPQK--KALVQAFVCHDQGASSLVFAPQHQLLISAGKKGD 78 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~-~~l~~~g~~s~~~~i~iwd~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 78 (213)
.|++|.+.|++++|+|++ ++|+++ +.|++|++|++..... ......+.+|...|.+++|+|++++|++|+.|+.
T Consensus 377 ~l~~H~~~V~~v~~~~~~~~~l~s~---s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~ 453 (694)
T 3dm0_A 377 TMRAHTDMVTAIATPIDNADIIVSA---SRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGE 453 (694)
T ss_dssp EEECCSSCEEEEECCTTCCSEEEEE---ETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred hcccCCceeEEEEecCCCCCEEEEE---eCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCc
Confidence 478999999999999864 789998 6899999999853221 2345678899999999999999999999999999
Q ss_pred EEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee--------------------eceEEEEEccCC--ce
Q psy7433 79 ICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK--------------------SPVKCLAIDPHE--EF 136 (213)
Q Consensus 79 v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~--------------------~~v~~~~~~~~~--~~ 136 (213)
|++||+.+++....+.+|...|.+++|+|+++.|++++.|+.++ ..|.+++|+|++ .+
T Consensus 454 v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 533 (694)
T 3dm0_A 454 LRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPT 533 (694)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCE
T ss_pred EEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcce
Confidence 99999999999999999999999999999999999999999886 348999999987 58
Q ss_pred EEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCccc
Q psy7433 137 FVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 137 l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
+++++.|+.|++||+++++....+.+|. ..|++++|+|++ +|++++.||.|++||+.+++.+
T Consensus 534 l~s~s~d~~v~vwd~~~~~~~~~~~~h~----------~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~ 596 (694)
T 3dm0_A 534 IVSASWDKTVKVWNLSNCKLRSTLAGHT----------GYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKL 596 (694)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCCS----------SCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEE
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEcCCC----------CCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceE
Confidence 9999999999999999999988888876 789999999965 6899999999999999987543
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-34 Score=212.65 Aligned_cols=186 Identities=20% Similarity=0.352 Sum_probs=166.3
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
+|++|...|.+++|+|++++|+++ +.|++|++||+ .+++.+..+.+|...|.+++|+|++++|++++.|+.|++
T Consensus 60 ~~~~h~~~v~~~~~s~dg~~l~s~---s~D~~v~~wd~---~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~v 133 (319)
T 3frx_A 60 SFKGHSHIVQDCTLTADGAYALSA---SWDKTLRLWDV---ATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKV 133 (319)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEE---ETTSEEEEEET---TTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEE
T ss_pred EEeCCcccEEEEEECCCCCEEEEE---eCCCEEEEEEC---CCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 478999999999999999999999 68999999999 567788889999999999999999999999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCC------CCEEEEecCCCcee-----------------eceEEEEEccCCceEE
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPH------EEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFV 138 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~------~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~ 138 (213)
||++ ++.+..+.+|...+.++++.|. +..+++++.|+.++ ..|.+++|+|++++|+
T Consensus 134 wd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~ 212 (319)
T 3frx_A 134 WTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIA 212 (319)
T ss_dssp EETT-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEE
T ss_pred EECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEE
Confidence 9997 4566777889999999999985 44899999999886 6799999999999999
Q ss_pred EecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCC
Q psy7433 139 TGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 139 ~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 205 (213)
+++.||.|++||+++++.+..+..+ ..|.+++|+|++.+++++.++.+++|++...
T Consensus 213 s~~~dg~i~iwd~~~~~~~~~~~~~-----------~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~ 268 (319)
T 3frx_A 213 SAGKDGEIMLWNLAAKKAMYTLSAQ-----------DEVFSLAFSPNRYWLAAATATGIKVFSLDPQ 268 (319)
T ss_dssp EEETTCEEEEEETTTTEEEEEEECC-----------SCEEEEEECSSSSEEEEEETTEEEEEEETTE
T ss_pred EEeCCCeEEEEECCCCcEEEEecCC-----------CcEEEEEEcCCCCEEEEEcCCCcEEEEeCcC
Confidence 9999999999999999998888764 5799999999887555566677999998765
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-34 Score=214.98 Aligned_cols=188 Identities=23% Similarity=0.417 Sum_probs=160.2
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
++.+|...|.+++|+|++.+++++ +.|++|++||+ .+.+.+..+.+|...|.+++|+|++++|++++.|+.|++
T Consensus 71 ~l~~h~~~V~~~~~~~~~~~l~s~---s~D~~v~lwd~---~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~ 144 (343)
T 2xzm_R 71 ALTGHNHFVSDLALSQENCFAISS---SWDKTLRLWDL---RTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKL 144 (343)
T ss_dssp EECCCSSCEEEEEECSSTTEEEEE---ETTSEEEEEET---TSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEE
T ss_pred hhccCCCceEEEEECCCCCEEEEE---cCCCcEEEEEC---CCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEE
Confidence 467899999999999999999999 68999999999 566778888999999999999999999999999999999
Q ss_pred EeccCceEEEec--ccCCCCeeEEEecCCC----------CEEEEecCCCcee----------------eceEEEEEccC
Q psy7433 82 IDLRQRVIRSRF--NAHESPVKCLAIDPHE----------EFFVTGAGDGDIK----------------SPVKCLAIDPH 133 (213)
Q Consensus 82 wd~~~~~~~~~~--~~~~~~i~~~~~~~~~----------~~l~~~~~~~~i~----------------~~v~~~~~~~~ 133 (213)
||+......... ..|...+.+++|+|++ .+|++++.|+.++ ..|.+++|+|+
T Consensus 145 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~h~~~v~~~~~s~~ 224 (343)
T 2xzm_R 145 WNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFKAHESNVNHLSISPN 224 (343)
T ss_dssp EESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEEECCSSCEEEEEECTT
T ss_pred EeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEEcCccccceEEEECCC
Confidence 999854333222 2678899999999986 7899999999876 57999999999
Q ss_pred CceEEEecCCCcEEEEEccC-CeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCc
Q psy7433 134 EEFFVTGAGDGDIKVWSLSG-NHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 134 ~~~l~~~~~dg~i~v~d~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~ 206 (213)
+++|++|+.||.|++||++. ......+.. +..|.+++|+|++.+++++.|+.|++|++.+.+
T Consensus 225 g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~-----------~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~ 287 (343)
T 2xzm_R 225 GKYIATGGKDKKLLIWDILNLTYPQREFDA-----------GSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQS 287 (343)
T ss_dssp SSEEEEEETTCEEEEEESSCCSSCSEEEEC-----------SSCEEEEEECSSSCEEEEEESSCEEEEESSSCC
T ss_pred CCEEEEEcCCCeEEEEECCCCcccceeecC-----------CCcEEEEEECCCCCEEEEECCCCEEEEEeCCCC
Confidence 99999999999999999943 333333322 257999999998887778889999999998654
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-34 Score=210.61 Aligned_cols=193 Identities=19% Similarity=0.345 Sum_probs=169.2
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
++.+|...|.+++|+|++++|+++ +.|+.|++||+ .+.+.+..+.+|...|.+++|+|++++|++++.|+.|++
T Consensus 60 ~~~~h~~~v~~~~~~~~~~~l~s~---~~d~~i~vwd~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~i 133 (312)
T 4ery_A 60 TISGHKLGISDVAWSSDSNLLVSA---SDDKTLKIWDV---SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 133 (312)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEE---ETTSEEEEEET---TTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEE
T ss_pred hhccCCCceEEEEEcCCCCEEEEE---CCCCEEEEEEC---CCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEE
Confidence 467899999999999999999999 68999999999 566778888999999999999999999999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee------------------eceEEEEEccCCceEEEecCC
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------SPVKCLAIDPHEEFFVTGAGD 143 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------~~v~~~~~~~~~~~l~~~~~d 143 (213)
||+++++.+..+..|..++.+++|+|+++.|++++.|+.++ ..+..++|+|++++|++++.|
T Consensus 134 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 213 (312)
T 4ery_A 134 WDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD 213 (312)
T ss_dssp EETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETT
T ss_pred EECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCC
Confidence 99999999999999999999999999999999999999886 468889999999999999999
Q ss_pred CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCC-CCeEEEEecCCcEEEEeCCCCcc
Q psy7433 144 GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG-GSRLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 144 g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~s~~~d~~i~iw~~~~~~~ 207 (213)
+.|++||+++++.+..+..|.... ..+......+ +.+|++++.||.|++||+.+++.
T Consensus 214 ~~i~iwd~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~ 271 (312)
T 4ery_A 214 NTLKLWDYSKGKCLKTYTGHKNEK-------YCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEI 271 (312)
T ss_dssp TEEEEEETTTTEEEEEECSSCCSS-------SCCCEEEECSSSCEEEECCTTSCEEEEETTTCCE
T ss_pred CeEEEEECCCCcEEEEEEecCCce-------EEEEEEEEeCCCcEEEEECCCCEEEEEECCCchh
Confidence 999999999999998888765321 1122222223 45699999999999999988754
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-35 Score=223.09 Aligned_cols=190 Identities=17% Similarity=0.331 Sum_probs=166.5
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
+|++|.+.|++++|+|++++|+++ +.|++|++||+ .+.+....+..|...|.+++|+|++++|++|+.|+.+++
T Consensus 61 ~l~gH~~~V~~~~~sp~~~~l~s~---s~D~~v~iWd~---~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~i 134 (380)
T 3iz6_a 61 TLQGHSGKVYSLDWTPEKNWIVSA---SQDGRLIVWNA---LTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSI 134 (380)
T ss_dssp EECCCSSCEEEEEECTTSSCEEEE---ETTSEEEEEET---TTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEE
T ss_pred cccccccEEEEEEEcCCCCEEEEE---eCCCeEEEEEC---CCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEE
Confidence 588999999999999999999999 78999999998 566777888899999999999999999999999999999
Q ss_pred EeccCce-------EEEecccCCCCeeEEEecCC-CCEEEEecCCCcee----------------------eceEEEEEc
Q psy7433 82 IDLRQRV-------IRSRFNAHESPVKCLAIDPH-EEFFVTGAGDGDIK----------------------SPVKCLAID 131 (213)
Q Consensus 82 wd~~~~~-------~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~~~~i~----------------------~~v~~~~~~ 131 (213)
||+.+.. ....+.+|...+.++.|.|+ +..|++++.|+.++ ..+.+++|+
T Consensus 135 w~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 214 (380)
T 3iz6_a 135 FNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSIN 214 (380)
T ss_dssp EECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEEC
T ss_pred EECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEee
Confidence 9997532 23456789999999999996 45799999999886 357889997
Q ss_pred c-CCceEEEecCCCcEEEEEcc-CCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCcc
Q psy7433 132 P-HEEFFVTGAGDGDIKVWSLS-GNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 132 ~-~~~~l~~~~~dg~i~v~d~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~ 207 (213)
| +++++++|+.|+.|++||++ ..+.+..+.+|. ..|.+++|+|++ +|++++.|+.|++||+.++..
T Consensus 215 ~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~----------~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~ 283 (380)
T 3iz6_a 215 SLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHE----------GDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQ 283 (380)
T ss_dssp SSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCS----------SCCCEEEECTTSSEEEEECSSSCEEEEETTTTEE
T ss_pred cCCCCEEEEEECCCeEEEEECCCCCcceEEECCcC----------CCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcE
Confidence 7 78899999999999999998 456777777776 789999999965 699999999999999998754
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-35 Score=220.46 Aligned_cols=191 Identities=19% Similarity=0.322 Sum_probs=165.8
Q ss_pred ccccccCceEEEEEeCC-CCeEEEeeccCCCccEEEEeCCCcccccceeee-----eeecCCceEEEEec-CCCEEEEEc
Q psy7433 2 TYQCHNKITSDFVFLGS-CSLVATAGHSSESKNVCLWDSLLPQKKALVQAF-----VCHDQGASSLVFAP-QHQLLISAG 74 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~-~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~-----~~~~~~v~~~~~~~-~~~~l~~~~ 74 (213)
++.+|.+.|.++.|.|+ +..|+++ +.|++|++||++ +++.+..+ .+|...|.+++|++ ++++|++|+
T Consensus 152 ~~~gh~~~v~~~~~~~~~~~~l~s~---s~D~~i~~wd~~---~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs 225 (380)
T 3iz6_a 152 VLTGHKGYASSCQYVPDQETRLITG---SGDQTCVLWDVT---TGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGS 225 (380)
T ss_dssp BCCCCSSCCCCCBCCSSSSSCEEEE---CTTSCEEEECTT---TCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEE
T ss_pred eccCCCcceEEEEEecCCCCEEEEE---CCCCcEEEEEcC---CCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEE
Confidence 46799999999999996 4568888 799999999994 45555544 56888999999987 889999999
Q ss_pred CCCcEEEEecc-CceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee------------------------eceEEEE
Q psy7433 75 KKGDICVIDLR-QRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------------SPVKCLA 129 (213)
Q Consensus 75 ~d~~v~iwd~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------------~~v~~~~ 129 (213)
.|+.|++||++ .++.+..+.+|...|.+++|+|++++|++++.|+.++ ..+.+++
T Consensus 226 ~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 305 (380)
T 3iz6_a 226 CDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVA 305 (380)
T ss_dssp TTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEE
T ss_pred CCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEE
Confidence 99999999998 4577788889999999999999999999999999987 1378999
Q ss_pred EccCCceEEEecCCCcEEEEEccCCeeeeee----cCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCC
Q psy7433 130 IDPHEEFFVTGAGDGDIKVWSLSGNHLLYNF----PGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 130 ~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~----~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~ 204 (213)
|+|+|++|++|+.||.|++||+..++....+ .+|. ..|.+++|+|++ .|++++.|+.|++|++..
T Consensus 306 ~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~----------~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 306 FSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHE----------GRISCLGLSSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp ECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCC----------CCCCEEEECSSSSEEEEECTTSCEEEEECCS
T ss_pred ECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCC----------CceEEEEECCCCCEEEEeeCCCCEEEEecCC
Confidence 9999999999999999999999988877766 3343 789999999975 699999999999999987
Q ss_pred Cccc
Q psy7433 205 RDAV 208 (213)
Q Consensus 205 ~~~~ 208 (213)
.+++
T Consensus 376 ~~~i 379 (380)
T 3iz6_a 376 HRKI 379 (380)
T ss_dssp SSSC
T ss_pred Cccc
Confidence 7554
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-34 Score=227.59 Aligned_cols=184 Identities=21% Similarity=0.365 Sum_probs=166.3
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
.|+||++.|++++|+|+|++||++ +.|+.|+|||. +.+.+..+.+|...|.+++|+|++++|++++.|+.|++
T Consensus 11 ~L~GH~~~V~~~a~spdg~~las~---~~d~~v~iWd~----~~~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~v 83 (577)
T 2ymu_A 11 RLEAHSSSVRGVAFSPDGQTIASA---SDDKTVKLWNR----NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKL 83 (577)
T ss_dssp EECCCSSCEEEEEECTTSSCEEEE---ETTSEEEEECT----TSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred EECCCCCcEEEEEECCCCCEEEEE---eCCCEEEEEEC----CCCEEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEE
Confidence 488999999999999999999999 68999999995 45678889999999999999999999999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee---------------------------------------
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK--------------------------------------- 122 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~--------------------------------------- 122 (213)
||+ +++.+..+.+|...|.+++|+|+++++++++.|+.++
T Consensus 84 Wd~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 162 (577)
T 2ymu_A 84 WNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKT 162 (577)
T ss_dssp EET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSE
T ss_pred EEC-CCCEEEEEECCCCCEEEEEECCCCCEEEEEcCCCceeecccccceeeeccCCCCceeeeeeecCCccceecccccc
Confidence 995 5778888999999999999999999999999998764
Q ss_pred ------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCC
Q psy7433 123 ------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG 184 (213)
Q Consensus 123 ------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 184 (213)
..+.++.++|+++++++++.|+.|++||. +++.+..+..|. ..|.+++|+|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~----------~~v~~~~~s~ 231 (577)
T 2ymu_A 163 VKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHS----------SSVRGVAFSP 231 (577)
T ss_dssp EEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCS----------SCEEEEEECT
T ss_pred eeccccceeeeeeccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeC-CCcEEEEEecCC----------CCEEEEEECC
Confidence 56788999999999999999999999995 567777777775 7899999999
Q ss_pred CC-eEEEEecCCcEEEEeCCC
Q psy7433 185 GS-RLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 185 ~~-~l~s~~~d~~i~iw~~~~ 204 (213)
++ +|++++.|+.|++||...
T Consensus 232 dg~~l~~~~~d~~i~~w~~~~ 252 (577)
T 2ymu_A 232 DGQTIASASDDKTVKLWNRNG 252 (577)
T ss_dssp TSSCEEEEETTSCEEEECTTS
T ss_pred CCCEEEEEeCCCEEEEEeCCC
Confidence 75 699999999999999754
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-34 Score=214.49 Aligned_cols=192 Identities=18% Similarity=0.272 Sum_probs=169.2
Q ss_pred CccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecC--CCEEEEEcCCCc
Q psy7433 1 MTYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQ--HQLLISAGKKGD 78 (213)
Q Consensus 1 ~~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~ 78 (213)
.++++|.+.|++++|+|++++|+++ +.|+.|++||++. .....+..+.+|...|.+++|+++ +++|++++.||.
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~---~~dg~i~iw~~~~-~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~ 80 (379)
T 3jrp_A 5 VIANAHNELIHDAVLDYYGKRLATC---SSDKTIKIFEVEG-ETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 80 (379)
T ss_dssp CCEEECCCCEEEEEECSSSSEEEEE---ETTSCEEEEEEET-TEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred EEecCCcccEEEEEEcCCCCEEEEE---ECCCcEEEEecCC-CcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCE
Confidence 3688999999999999999999999 6899999999842 255677788899999999999976 899999999999
Q ss_pred EEEEeccCce--EEEecccCCCCeeEEEecCC--CCEEEEecCCCcee-------------------eceEEEEEcc---
Q psy7433 79 ICVIDLRQRV--IRSRFNAHESPVKCLAIDPH--EEFFVTGAGDGDIK-------------------SPVKCLAIDP--- 132 (213)
Q Consensus 79 v~iwd~~~~~--~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~~~~i~-------------------~~v~~~~~~~--- 132 (213)
|++||+++++ .+..+..|...+.+++|+|+ +..+++++.|+.++ ..|.+++|+|
T Consensus 81 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 160 (379)
T 3jrp_A 81 VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATI 160 (379)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC-
T ss_pred EEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccc
Confidence 9999999986 67777889999999999999 99999999999886 5789999999
Q ss_pred ----------CCceEEEecCCCcEEEEEccCCe----eeeeecCCCCceeEEEecCCCeEEEEeCCC---C-eEEEEecC
Q psy7433 133 ----------HEEFFVTGAGDGDIKVWSLSGNH----LLYNFPGEHARSSFFKHIGQGVTQLHVDGG---S-RLFSCGAD 194 (213)
Q Consensus 133 ----------~~~~l~~~~~dg~i~v~d~~~~~----~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~-~l~s~~~d 194 (213)
+++++++++.|+.|++||++++. ....+..|. ..|.+++|+|+ + +|++++.|
T Consensus 161 ~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~----------~~v~~~~~sp~~~~~~~l~s~~~d 230 (379)
T 3jrp_A 161 EEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS----------DWVRDVAWSPTVLLRSYLASVSQD 230 (379)
T ss_dssp ---------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCS----------SCEEEEEECCCCSSSEEEEEEETT
T ss_pred cccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEeccc----------CcEeEEEECCCCCCCCeEEEEeCC
Confidence 68999999999999999998653 445566655 78999999997 4 58999999
Q ss_pred CcEEEEeCCCCc
Q psy7433 195 GSMKVRQLPDRD 206 (213)
Q Consensus 195 ~~i~iw~~~~~~ 206 (213)
|.|++||+.++.
T Consensus 231 g~i~iwd~~~~~ 242 (379)
T 3jrp_A 231 RTCIIWTQDNEQ 242 (379)
T ss_dssp SCEEEEEESSTT
T ss_pred CEEEEEeCCCCC
Confidence 999999998763
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-34 Score=216.04 Aligned_cols=191 Identities=20% Similarity=0.300 Sum_probs=159.0
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeec------------------CCceEEEEecC
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHD------------------QGASSLVFAPQ 66 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~------------------~~v~~~~~~~~ 66 (213)
+|.+.|.+++|+|+|++||++ .++.+++|++. .+..+..+..+. ..|.+++|+|+
T Consensus 62 ~h~~~V~~v~fspdg~~la~g----~~~~v~i~~~~---~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~d 134 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATG----CNKTTQVYRVS---DGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPD 134 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEE----CBSCEEEEETT---TCCEEEEECC-----------------CCCCBEEEEEECTT
T ss_pred CCCCEEEEEEECCCCCEEEEE----cCCcEEEEEec---CCCEEEEecCccccccccccccccccCCCceeEEEEEECCC
Confidence 699999999999999999998 47899999984 444554444332 24899999999
Q ss_pred CCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee----------------eceEEEEE
Q psy7433 67 HQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----------------SPVKCLAI 130 (213)
Q Consensus 67 ~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------~~v~~~~~ 130 (213)
+++|++|+.|+.|++||+++++.+..+.+|...|.+++|+|+++.|++++.|+.++ ..+.+++|
T Consensus 135 g~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~ 214 (393)
T 1erj_A 135 GKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAV 214 (393)
T ss_dssp SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEE
Confidence 99999999999999999999999999999999999999999999999999999887 56889999
Q ss_pred cc-CCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCC
Q psy7433 131 DP-HEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 131 ~~-~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~ 205 (213)
+| +++++++|+.|+.|++||+++++.+..+..... ....|...|.+++|+|++ +|++++.|+.|++||+.+.
T Consensus 215 ~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~---~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~ 288 (393)
T 1erj_A 215 SPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENE---SGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNA 288 (393)
T ss_dssp CSTTCCEEEEEETTSCEEEEETTTCCEEEEEC---------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---
T ss_pred ECCCCCEEEEEcCCCcEEEEECCCCcEEEeeccccc---CCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 99 899999999999999999999887776632110 011223789999999965 6999999999999999764
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=230.54 Aligned_cols=197 Identities=15% Similarity=0.248 Sum_probs=164.2
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCC----C
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKK----G 77 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~ 77 (213)
+|.+|...|++++|+|+|++||++ +.|++|+|||+... .......+..|...|.+++|+|++++|++++.+ +
T Consensus 54 ~~~~h~~~v~~~~~spdg~~lasg---~~d~~v~lWd~~~~-~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~ 129 (611)
T 1nr0_A 54 IYTEHSHQTTVAKTSPSGYYCASG---DVHGNVRIWDTTQT-THILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFG 129 (611)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEE---ETTSEEEEEESSST-TCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSE
T ss_pred EecCCCCceEEEEECCCCcEEEEE---eCCCCEEEeECCCC-cceeeEeecccCCceEEEEECCCCCEEEEEECCCCcee
Confidence 578999999999999999999999 68999999998421 233455678899999999999999999988765 4
Q ss_pred cEEEEeccCceEEEecccCCCCeeEEEecCCCC-EEEEecCCCcee-----------------eceEEEEEccCCceEEE
Q psy7433 78 DICVIDLRQRVIRSRFNAHESPVKCLAIDPHEE-FFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVT 139 (213)
Q Consensus 78 ~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~ 139 (213)
.|++|| +++....+.+|...|.+++|+|++. .|++++.|+.++ ..|.+++|+|++++|++
T Consensus 130 ~v~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las 207 (611)
T 1nr0_A 130 HVFLFD--TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFAS 207 (611)
T ss_dssp EEEETT--TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred EEEEee--CCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEE
Confidence 677777 4556677889999999999999987 699999999886 57999999999999999
Q ss_pred ecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCcc
Q psy7433 140 GAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 140 ~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~ 207 (213)
++.|+.|++||+++++.+..+..... ....|...|.+++|+|++ +|++++.|+.|++||+.+++.
T Consensus 208 ~s~D~~i~lwd~~~g~~~~~~~~~~~---~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~ 273 (611)
T 1nr0_A 208 TGGDGTIVLYNGVDGTKTGVFEDDSL---KNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKV 273 (611)
T ss_dssp EETTSCEEEEETTTCCEEEECBCTTS---SSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred EECCCcEEEEECCCCcEeeeeccccc---cccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCce
Confidence 99999999999999888877742000 000123789999999975 699999999999999987654
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-33 Score=211.84 Aligned_cols=190 Identities=12% Similarity=0.214 Sum_probs=172.9
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
+|.+|.+.|++++|+|++++|+++ +.|+.|++||+ ...+.+..+..|...|.+++|+|++++|++++.||.|++
T Consensus 27 ~l~~h~~~v~~~~~s~~~~~l~~~---~~dg~i~vwd~---~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~i 100 (369)
T 3zwl_B 27 KLTGHERPLTQVKYNKEGDLLFSC---SKDSSASVWYS---LNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKL 100 (369)
T ss_dssp EEECCSSCEEEEEECTTSCEEEEE---ESSSCEEEEET---TTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEE
T ss_pred EEEEeeceEEEEEEcCCCCEEEEE---eCCCEEEEEeC---CCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 578999999999999999999999 68999999998 567788888899999999999999999999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCC-----Ccee------------------------------eceE
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGD-----GDIK------------------------------SPVK 126 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~-----~~i~------------------------------~~v~ 126 (213)
||+++++.+..+. +...+.+++|+|+++.+++++.+ +.+. ..+.
T Consensus 101 wd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (369)
T 3zwl_B 101 WDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAAT 179 (369)
T ss_dssp EETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEE
T ss_pred EECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCcccee
Confidence 9999999888887 88899999999999999999988 7665 1899
Q ss_pred EEEEccCCceEEEecCCCcEEEEEccC-CeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCC
Q psy7433 127 CLAIDPHEEFFVTGAGDGDIKVWSLSG-NHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 127 ~~~~~~~~~~l~~~~~dg~i~v~d~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~ 204 (213)
+++|+|+++++++++.||.|++||+++ .+.+..+..|. ..|.+++|+|++ +|++++.|+.|++||+.+
T Consensus 180 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~----------~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~ 249 (369)
T 3zwl_B 180 VAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHE----------KSISDMQFSPDLTYFITSSRDTNSFLVDVST 249 (369)
T ss_dssp EEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCS----------SCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred EEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCC----------CceeEEEECCCCCEEEEecCCceEEEEECCC
Confidence 999999999999999999999999998 78888888775 789999999965 589999999999999988
Q ss_pred Cccc
Q psy7433 205 RDAV 208 (213)
Q Consensus 205 ~~~~ 208 (213)
.+..
T Consensus 250 ~~~~ 253 (369)
T 3zwl_B 250 LQVL 253 (369)
T ss_dssp CCEE
T ss_pred Ccee
Confidence 7543
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-34 Score=216.09 Aligned_cols=187 Identities=16% Similarity=0.289 Sum_probs=164.9
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec-CCCEEEEEcCCCcEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP-QHQLLISAGKKGDIC 80 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~ 80 (213)
++++|...|.+++|+|++++|+++ +.|++|++||++ +.+....+. +...+.+++|+| ++++|++++.|+.|+
T Consensus 160 ~~~~h~~~v~~~~~~p~~~~l~s~---s~d~~v~iwd~~---~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~ 232 (393)
T 1erj_A 160 ILQGHEQDIYSLDYFPSGDKLVSG---SGDRTVRIWDLR---TGQCSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVR 232 (393)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEE---ETTSEEEEEETT---TTEEEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEE
T ss_pred EEccCCCCEEEEEEcCCCCEEEEe---cCCCcEEEEECC---CCeeEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEE
Confidence 467899999999999999999999 689999999994 455555544 567799999999 899999999999999
Q ss_pred EEeccCceEEEec-------ccCCCCeeEEEecCCCCEEEEecCCCcee-----------------------------ec
Q psy7433 81 VIDLRQRVIRSRF-------NAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------------------SP 124 (213)
Q Consensus 81 iwd~~~~~~~~~~-------~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------------------~~ 124 (213)
+||+++++.+..+ .+|...|.+++|+|++++|++++.|+.++ ..
T Consensus 233 iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 312 (393)
T 1erj_A 233 VWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDF 312 (393)
T ss_dssp EEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSC
T ss_pred EEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCc
Confidence 9999998877666 46888999999999999999999999876 24
Q ss_pred eEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCC------C-CeEEEEecCCcE
Q psy7433 125 VKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG------G-SRLFSCGADGSM 197 (213)
Q Consensus 125 v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~------~-~~l~s~~~d~~i 197 (213)
|.+++|+|++++|++|+.|+.|++||+++++++..+.+|. ..|.+++|++ + +.|++++.||.|
T Consensus 313 v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~----------~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i 382 (393)
T 1erj_A 313 VLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHR----------NSVISVAVANGSSLGPEYNVFATGSGDCKA 382 (393)
T ss_dssp EEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCS----------SCEEEEEECSSCTTCTTCEEEEEEETTSEE
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCC----------CCEEEEEecCCcCcCCCCCEEEEECCCCcE
Confidence 7889999999999999999999999999999999998886 7899999986 2 369999999999
Q ss_pred EEEeCCCC
Q psy7433 198 KVRQLPDR 205 (213)
Q Consensus 198 ~iw~~~~~ 205 (213)
++|++...
T Consensus 383 ~iW~~~~~ 390 (393)
T 1erj_A 383 RIWKYKKI 390 (393)
T ss_dssp EEEEEEEC
T ss_pred EECccccc
Confidence 99998653
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-34 Score=225.43 Aligned_cols=181 Identities=22% Similarity=0.385 Sum_probs=165.5
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
++.+|...|++++|+|++++|+++ +.|+.|++||. ..+.+..+.+|...|.+++|+|++++|++++.|+.|++
T Consensus 380 ~~~~~~~~v~~~~~s~dg~~l~~~---~~d~~v~~~~~----~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~ 452 (577)
T 2ymu_A 380 TLTGHSSSVRGVAFSPDGQTIASA---SDDKTVKLWNR----NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKL 452 (577)
T ss_dssp EEECCSSCEEEEEECTTSSCEEEE---ETTSEEEEECT----TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EecCCCCCeEEEEECCCCCEEEEE---eCCCEEEEEeC----CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEE
Confidence 467899999999999999999999 68999999995 45677888899999999999999999999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee----------------eceEEEEEccCCceEEEecCCCc
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----------------SPVKCLAIDPHEEFFVTGAGDGD 145 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------~~v~~~~~~~~~~~l~~~~~dg~ 145 (213)
||. +++.+..+.+|...+.+++|+|++++|++++.|+.++ ..|++++|+|++++|++++.||.
T Consensus 453 w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~ 531 (577)
T 2ymu_A 453 WNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKT 531 (577)
T ss_dssp EET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSE
T ss_pred EEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCE
Confidence 996 5677788888999999999999999999999999886 67999999999999999999999
Q ss_pred EEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEe
Q psy7433 146 IKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQ 201 (213)
Q Consensus 146 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~ 201 (213)
|++||. +++.+..+.+|. ..|++++|+|++ +|+|++.|+.|++||
T Consensus 532 v~lwd~-~~~~~~~~~~h~----------~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 532 VKLWNR-NGQLLQTLTGHS----------SSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EEEECT-TSCEEEEEECCS----------SCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEEeC-CCCEEEEEcCCC----------CCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 999995 678888888876 789999999975 599999999999997
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-34 Score=219.88 Aligned_cols=195 Identities=17% Similarity=0.250 Sum_probs=157.4
Q ss_pred cccccCceEEEEEeC-CCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec-CCCEEEEEcCCCcEE
Q psy7433 3 YQCHNKITSDFVFLG-SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP-QHQLLISAGKKGDIC 80 (213)
Q Consensus 3 l~~h~~~v~~~~~~~-~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~ 80 (213)
..+|...|++++|+| ++++||+| +.||.|+|||+... .......+.+|...|++++|+| ++++|++++.||+|+
T Consensus 115 ~~~~~~~V~~l~~~P~~~~~lasG---s~dg~i~lWd~~~~-~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~ 190 (435)
T 4e54_B 115 AAPFDRRATSLAWHPTHPSTVAVG---SKGGDIMLWNFGIK-DKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTR 190 (435)
T ss_dssp EEECSSCEEEEEECSSCTTCEEEE---ETTSCEEEECSSCC-SCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEE
T ss_pred CCCCCCCEEEEEEeCCCCCEEEEE---eCCCEEEEEECCCC-CceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEE
Confidence 457889999999999 56789998 69999999998532 2234445668999999999998 689999999999999
Q ss_pred EEeccCceEEEecc--cCCCCeeEEEecCCCCEEEEecCCCcee----------------eceEEEEEccCCc-eEEEec
Q psy7433 81 VIDLRQRVIRSRFN--AHESPVKCLAIDPHEEFFVTGAGDGDIK----------------SPVKCLAIDPHEE-FFVTGA 141 (213)
Q Consensus 81 iwd~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------~~v~~~~~~~~~~-~l~~~~ 141 (213)
+||++++....... .+...+.+++|+|++.+|++++.|+.++ ..|.+++|+|+++ ++++++
T Consensus 191 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s 270 (435)
T 4e54_B 191 LQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATAS 270 (435)
T ss_dssp EEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEE
T ss_pred EeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEec
Confidence 99998765433332 2345678999999999999999999886 6799999999987 788999
Q ss_pred CCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCccc
Q psy7433 142 GDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 142 ~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
.|+.|++||+++.+....+... ..|...|++++|+|++ +|++++.||.|++||+.+....
T Consensus 271 ~d~~v~iwd~~~~~~~~~~~~~-------~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~ 331 (435)
T 4e54_B 271 VDQTVKIWDLRQVRGKASFLYS-------LPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCP 331 (435)
T ss_dssp TTSBCCEEETTTCCSSSCCSBC-------CBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSE
T ss_pred CcceeeEEecccccccceEEEe-------eeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccc
Confidence 9999999999876654433211 0123789999999965 6999999999999999886543
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-33 Score=222.48 Aligned_cols=188 Identities=19% Similarity=0.285 Sum_probs=168.3
Q ss_pred ccccccCceEEEEEeCCCC-eEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEE
Q psy7433 2 TYQCHNKITSDFVFLGSCS-LVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDIC 80 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~-~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 80 (213)
++.+|.+.|++++|+|++. .|+++ +.|++|++||. ...+....+.+|...|.+++|+|++++|++++.|+.|+
T Consensus 142 ~l~gh~~~v~~v~f~p~~~~~l~s~---s~D~~v~lwd~---~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~ 215 (611)
T 1nr0_A 142 NLTGQARAMNSVDFKPSRPFRIISG---SDDNTVAIFEG---PPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIV 215 (611)
T ss_dssp CCCCCSSCEEEEEECSSSSCEEEEE---ETTSCEEEEET---TTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred eecCCCCCceEEEECCCCCeEEEEE---eCCCeEEEEEC---CCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEE
Confidence 4789999999999999987 58888 68999999998 55677788899999999999999999999999999999
Q ss_pred EEeccCceEEEecc-------cCCCCeeEEEecCCCCEEEEecCCCcee-------------------------------
Q psy7433 81 VIDLRQRVIRSRFN-------AHESPVKCLAIDPHEEFFVTGAGDGDIK------------------------------- 122 (213)
Q Consensus 81 iwd~~~~~~~~~~~-------~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------------------- 122 (213)
+||+.+++....+. +|...|.+++|+|++++|++++.|+.++
T Consensus 216 lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (611)
T 1nr0_A 216 LYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQ 295 (611)
T ss_dssp EEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSS
T ss_pred EEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCC
Confidence 99999998887774 6899999999999999999999999776
Q ss_pred -----------------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeec-CCCCceeEEEe
Q psy7433 123 -----------------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFP-GEHARSSFFKH 172 (213)
Q Consensus 123 -----------------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~-~~~~~~~~~~~ 172 (213)
..|.+++|+|++++|++++.|+.|++||+++++....+. .|.
T Consensus 296 ~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~-------- 367 (611)
T 1nr0_A 296 ALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHA-------- 367 (611)
T ss_dssp CEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCS--------
T ss_pred EEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCc--------
Confidence 136789999999999999999999999999888766553 333
Q ss_pred cCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCC
Q psy7433 173 IGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 173 ~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 205 (213)
..|.+++|++++.+++++.|+.+++|++...
T Consensus 368 --~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~ 398 (611)
T 1nr0_A 368 --TMITGIKTTSKGDLFTVSWDDHLKVVPAGGS 398 (611)
T ss_dssp --SCEEEEEECTTSCEEEEETTTEEEEECSSSS
T ss_pred --ceEEEEEECCCCcEEEEEcCCceEEeecCCc
Confidence 6899999999889999999999999998764
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=218.17 Aligned_cols=188 Identities=17% Similarity=0.232 Sum_probs=158.5
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccc--cceeeeeeecCCceEEEEecCCCEEEEEcCCCcEE
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKK--ALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDIC 80 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 80 (213)
++.|.++|++++|+|++++|+++ +.|+.|++||+. .. +.+..+.+|...|.+++|+|++++|++++.|+.|+
T Consensus 7 ~~~~~~~v~~~~~s~~g~~l~~~---~~d~~i~iw~~~---~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~ 80 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQRTEFVTT---TATNQVELYEQD---GNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAY 80 (377)
T ss_dssp EEECSSCCSCCEECSSSSEEECC---CSSSCBCEEEEE---TTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEE
T ss_pred EecCCCcEEEEEECCCCCEEEEe---cCCCEEEEEEcc---CCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEE
Confidence 34567899999999999999999 789999999983 33 67777888999999999999999999999999999
Q ss_pred EEeccCce---EEEecccCCCCeeEEEecCCCCEEEEecCCCcee---------------------eceEEEEEccCCce
Q psy7433 81 VIDLRQRV---IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK---------------------SPVKCLAIDPHEEF 136 (213)
Q Consensus 81 iwd~~~~~---~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~---------------------~~v~~~~~~~~~~~ 136 (213)
+||+++++ ....+..|...|.+++|+|+++.|++++.|+.++ ..|.+++|+|++++
T Consensus 81 vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 160 (377)
T 3dwl_C 81 VYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVL 160 (377)
T ss_dssp EC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSE
T ss_pred EEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCE
Confidence 99999876 6677778999999999999999999999999875 46899999999999
Q ss_pred EEEecCCCcEEEEEccC------------------CeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcE
Q psy7433 137 FVTGAGDGDIKVWSLSG------------------NHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSM 197 (213)
Q Consensus 137 l~~~~~dg~i~v~d~~~------------------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i 197 (213)
|++++.|+.|++||++. ++++..+ .| ...|.+++|+|++ +|++++.|+.|
T Consensus 161 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----------~~~v~~~~~sp~~~~l~~~~~d~~i 229 (377)
T 3dwl_C 161 LAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PS----------GGWVHAVGFSPSGNALAYAGHDSSV 229 (377)
T ss_dssp EEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CC----------SSSEEEEEECTTSSCEEEEETTTEE
T ss_pred EEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cC----------CceEEEEEECCCCCEEEEEeCCCcE
Confidence 99999999999999953 3344444 33 3789999999965 59999999999
Q ss_pred EEEeCCCCcc
Q psy7433 198 KVRQLPDRDA 207 (213)
Q Consensus 198 ~iw~~~~~~~ 207 (213)
++||+.+++.
T Consensus 230 ~iwd~~~~~~ 239 (377)
T 3dwl_C 230 TIAYPSAPEQ 239 (377)
T ss_dssp C-CEECSTTS
T ss_pred EEEECCCCCC
Confidence 9999998765
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-34 Score=216.02 Aligned_cols=189 Identities=17% Similarity=0.311 Sum_probs=164.5
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
.+.+|.+.|.+++|+|++++|+++ +.|+.|++||+ ...+.+..+.+|...|.+++|+|++++|++++.|+.|++
T Consensus 134 ~~~~h~~~v~~~~~~~~~~~l~s~---s~d~~i~iwd~---~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~i 207 (420)
T 3vl1_A 134 IDQAHVSEITKLKFFPSGEALISS---SQDMQLKIWSV---KDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRL 207 (420)
T ss_dssp ETTSSSSCEEEEEECTTSSEEEEE---ETTSEEEEEET---TTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred ecccccCccEEEEECCCCCEEEEE---eCCCeEEEEeC---CCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEE
Confidence 357899999999999999999999 68999999999 566677888899999999999999999999999999999
Q ss_pred EeccCceEEEecccC------------------------CCCeeEEEecCCCCEEEEecCCCcee---------------
Q psy7433 82 IDLRQRVIRSRFNAH------------------------ESPVKCLAIDPHEEFFVTGAGDGDIK--------------- 122 (213)
Q Consensus 82 wd~~~~~~~~~~~~~------------------------~~~i~~~~~~~~~~~l~~~~~~~~i~--------------- 122 (213)
||+++++.+..+..+ ...+.+++|+|+++++++++.|+.++
T Consensus 208 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 287 (420)
T 3vl1_A 208 WECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPS 287 (420)
T ss_dssp EETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred eECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEccc
Confidence 999999888877642 24556667789999999999999886
Q ss_pred ---eceEEEEEccCCc-eEEEecCCCcEEEEEccCCee-eeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcE
Q psy7433 123 ---SPVKCLAIDPHEE-FFVTGAGDGDIKVWSLSGNHL-LYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSM 197 (213)
Q Consensus 123 ---~~v~~~~~~~~~~-~l~~~~~dg~i~v~d~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i 197 (213)
..+.+++|+|+++ +|++|+.||.|++||+++++. +..+..++ ...|.++.+.++..|++++.|+.|
T Consensus 288 ~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~---------~~~v~~~~~~~~~~l~s~~~d~~v 358 (420)
T 3vl1_A 288 KFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINE---------GTPINNVYFAAGALFVSSGFDTSI 358 (420)
T ss_dssp TTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEEST---------TSCEEEEEEETTEEEEEETTTEEE
T ss_pred ccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccC---------CCCceEEEeCCCCEEEEecCCccE
Confidence 5799999999999 999999999999999987643 55665543 368999988777789999999999
Q ss_pred EEEeCCCC
Q psy7433 198 KVRQLPDR 205 (213)
Q Consensus 198 ~iw~~~~~ 205 (213)
++|++...
T Consensus 359 ~iw~~~~~ 366 (420)
T 3vl1_A 359 KLDIISDP 366 (420)
T ss_dssp EEEEECCT
T ss_pred EEEeccCC
Confidence 99999874
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-32 Score=206.92 Aligned_cols=190 Identities=16% Similarity=0.249 Sum_probs=166.2
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCccccc--ceeeeeeecCCceEEEEecCCCEEEEEcCCCcE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKA--LVQAFVCHDQGASSLVFAPQHQLLISAGKKGDI 79 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v 79 (213)
.+..|.++|++++|+|++++|+++ +.|+.|++||+ ...+ .+..+.+|...|.+++|+|++++|++++.|+.|
T Consensus 3 ~~~~~~~~i~~~~~s~~~~~l~~~---~~d~~v~i~~~---~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i 76 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNKDRTQIAIC---PNNHEVHIYEK---SGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNA 76 (372)
T ss_dssp EEESCSSCCCEEEECTTSSEEEEE---CSSSEEEEEEE---ETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCE
T ss_pred eecccCCCeEEEEECCCCCEEEEE---eCCCEEEEEeC---CCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeE
Confidence 356799999999999999999999 68999999998 3443 778888999999999999999999999999999
Q ss_pred EEEeccCceEEEe--cccCCCCeeEEEecCCCCEEEEecCCCcee---------------------eceEEEEEccCCce
Q psy7433 80 CVIDLRQRVIRSR--FNAHESPVKCLAIDPHEEFFVTGAGDGDIK---------------------SPVKCLAIDPHEEF 136 (213)
Q Consensus 80 ~iwd~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~---------------------~~v~~~~~~~~~~~ 136 (213)
++||+++++.... +..+...+.+++|+|++++|++++.++.++ ..|.+++|+|++++
T Consensus 77 ~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 156 (372)
T 1k8k_C 77 YVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVL 156 (372)
T ss_dssp EEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSE
T ss_pred EEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCE
Confidence 9999998865443 456888999999999999999999999875 56899999999999
Q ss_pred EEEecCCCcEEEEEcc------------------CCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcE
Q psy7433 137 FVTGAGDGDIKVWSLS------------------GNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSM 197 (213)
Q Consensus 137 l~~~~~dg~i~v~d~~------------------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i 197 (213)
|++++.||.|++||++ .++.+..+..|. ..|.+++|+|++ .|++++.|+.|
T Consensus 157 l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~v~~~~~~~~~~~l~~~~~d~~i 226 (372)
T 1k8k_C 157 LAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSC----------GWVHGVCFSANGSRVAWVSHDSTV 226 (372)
T ss_dssp EEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCS----------SCEEEEEECSSSSEEEEEETTTEE
T ss_pred EEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCC----------CeEEEEEECCCCCEEEEEeCCCEE
Confidence 9999999999999964 556666666654 789999999965 69999999999
Q ss_pred EEEeCCCCcc
Q psy7433 198 KVRQLPDRDA 207 (213)
Q Consensus 198 ~iw~~~~~~~ 207 (213)
++||+.+++.
T Consensus 227 ~i~d~~~~~~ 236 (372)
T 1k8k_C 227 CLADADKKMA 236 (372)
T ss_dssp EEEEGGGTTE
T ss_pred EEEECCCCce
Confidence 9999987654
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-32 Score=202.39 Aligned_cols=189 Identities=20% Similarity=0.284 Sum_probs=159.5
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec-CCCEEEEEcCCCcEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP-QHQLLISAGKKGDIC 80 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~ 80 (213)
++++|.+.|++++|+|++++|+++ +.|++|++||++ ........+.+|...|.+++|+| ++.+|++|+.|+.|+
T Consensus 92 ~~~~h~~~v~~~~~~~~~~~l~sg---s~D~~v~lWd~~--~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~ 166 (304)
T 2ynn_A 92 DFEAHPDYIRSIAVHPTKPYVLSG---SDDLTVKLWNWE--NNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVK 166 (304)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEE---ETTSCEEEEEGG--GTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEE
T ss_pred EEeCCCCcEEEEEEcCCCCEEEEE---CCCCeEEEEECC--CCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEE
Confidence 477899999999999999999999 799999999984 22245567888999999999999 678999999999999
Q ss_pred EEeccCceEEEecc-cCCCCeeEEEecC--CCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEe
Q psy7433 81 VIDLRQRVIRSRFN-AHESPVKCLAIDP--HEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTG 140 (213)
Q Consensus 81 iwd~~~~~~~~~~~-~~~~~i~~~~~~~--~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~ 140 (213)
+||++++.....+. .+...+..+.++| ++.+|++++.|+.++ ..|.+++|+|++++|++|
T Consensus 167 iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~ 246 (304)
T 2ynn_A 167 VWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISG 246 (304)
T ss_dssp EEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEE
T ss_pred EEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEE
Confidence 99998876555443 4557889999987 678999999999887 678999999999999999
Q ss_pred cCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC--eEEEEecCCcEEEEeCCCC
Q psy7433 141 AGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS--RLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 141 ~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~~d~~i~iw~~~~~ 205 (213)
+.||.|++||+++++.+..+..+. ..+.+++++|++ .+++++.++.+.+|++.++
T Consensus 247 s~Dg~i~iWd~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~asg~~~g~~~~~~~~~ 303 (304)
T 2ynn_A 247 SEDGTLKIWNSSTYKVEKTLNVGL----------ERSWCIATHPTGRKNYIASGFDNGFTVLSLGND 303 (304)
T ss_dssp ETTSCEEEEETTTCCEEEEECCSS----------SSEEEEEECTTCGGGCEEEEETTEEEEEECC--
T ss_pred cCCCeEEEEECCCCceeeeccCCC----------ccEEEEEECCCCCceEEEEecCCceEEEEeccC
Confidence 999999999999999999998876 689999999854 2344445666888888764
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-32 Score=201.50 Aligned_cols=189 Identities=17% Similarity=0.230 Sum_probs=156.1
Q ss_pred ccccccCceEEEEEeCC--CCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecC--CCEEEEEcCCC
Q psy7433 2 TYQCHNKITSDFVFLGS--CSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQ--HQLLISAGKKG 77 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~--~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~ 77 (213)
+|++|.++|++++|+|+ +++|+++ +.|++|++||++.. ....+..+..|...|.+++|+|+ +++|++++.|+
T Consensus 48 ~l~gH~~~V~~v~~s~~~~g~~l~s~---s~D~~v~iWd~~~~-~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~ 123 (297)
T 2pm7_B 48 TLTGHEGPVWRVDWAHPKFGTILASC---SYDGKVMIWKEENG-RWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDG 123 (297)
T ss_dssp EECCCSSCEEEEEECCGGGCSEEEEE---ETTTEEEEEEBSSS-CBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred EEccccCCeEEEEecCCCcCCEEEEE---cCCCEEEEEEcCCC-ceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCC
Confidence 57899999999999863 8999999 68999999998532 22355667789999999999997 88999999999
Q ss_pred cEEEEeccCce--EEEecccCCCCeeEEEecCC-------------CCEEEEecCCCcee--------------------
Q psy7433 78 DICVIDLRQRV--IRSRFNAHESPVKCLAIDPH-------------EEFFVTGAGDGDIK-------------------- 122 (213)
Q Consensus 78 ~v~iwd~~~~~--~~~~~~~~~~~i~~~~~~~~-------------~~~l~~~~~~~~i~-------------------- 122 (213)
.|++||++++. ....+.+|...+.+++|+|+ ++.|++++.|+.++
T Consensus 124 ~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H 203 (297)
T 2pm7_B 124 KVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH 203 (297)
T ss_dssp EEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCC
T ss_pred cEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCC
Confidence 99999998763 23456789999999999997 46899999999876
Q ss_pred -eceEEEEEccCC---ceEEEecCCCcEEEEEccCCe---eeeee--cCCCCceeEEEecCCCeEEEEeCCCC-eEEEEe
Q psy7433 123 -SPVKCLAIDPHE---EFFVTGAGDGDIKVWSLSGNH---LLYNF--PGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCG 192 (213)
Q Consensus 123 -~~v~~~~~~~~~---~~l~~~~~dg~i~v~d~~~~~---~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~ 192 (213)
..|.+++|+|++ ++|++++.|+.|++||++... ....+ ..+ ...|.+++|+|++ +|++++
T Consensus 204 ~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~----------~~~v~~~~~s~~g~~las~~ 273 (297)
T 2pm7_B 204 SDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKF----------PDVLWRASWSLSGNVLALSG 273 (297)
T ss_dssp SSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCC----------SSCEEEEEECSSSCCEEEEE
T ss_pred CCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccC----------CCcEEEEEECCCCCEEEEEc
Confidence 458999999985 799999999999999997642 11122 222 2689999999965 699999
Q ss_pred cCCcEEEEeCCC
Q psy7433 193 ADGSMKVRQLPD 204 (213)
Q Consensus 193 ~d~~i~iw~~~~ 204 (213)
.|+.|++|+...
T Consensus 274 ~D~~v~lw~~~~ 285 (297)
T 2pm7_B 274 GDNKVTLWKENL 285 (297)
T ss_dssp TTSCEEEEEECT
T ss_pred CCCcEEEEEECC
Confidence 999999999874
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-32 Score=222.60 Aligned_cols=189 Identities=19% Similarity=0.339 Sum_probs=167.2
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
++.+|...|.+++|+|++++|+++ +.|+.|++||+ .....+..+.+|...|.+++|+|++++|++++.|+.|++
T Consensus 425 ~~~~h~~~v~~v~~s~~g~~l~sg---s~Dg~v~vwd~---~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~i 498 (694)
T 3dm0_A 425 RLTGHSHFVEDVVLSSDGQFALSG---SWDGELRLWDL---AAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKL 498 (694)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEE---ETTSEEEEEET---TTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEE
T ss_pred eecCCCCcEEEEEECCCCCEEEEE---eCCCcEEEEEC---CCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEE
Confidence 467899999999999999999999 68999999999 566778888999999999999999999999999999999
Q ss_pred EeccCceEEEec---ccCCCCeeEEEecCCC--CEEEEecCCCcee-----------------eceEEEEEccCCceEEE
Q psy7433 82 IDLRQRVIRSRF---NAHESPVKCLAIDPHE--EFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVT 139 (213)
Q Consensus 82 wd~~~~~~~~~~---~~~~~~i~~~~~~~~~--~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~ 139 (213)
||.......... .+|...|.+++|+|++ ..+++++.|+.++ ..|.+++|+|++++|++
T Consensus 499 wd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s 578 (694)
T 3dm0_A 499 WNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCAS 578 (694)
T ss_dssp ECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred EECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEE
Confidence 998765443332 4578889999999986 5799999999886 67999999999999999
Q ss_pred ecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCcc
Q psy7433 140 GAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 140 ~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~ 207 (213)
++.||.|++||+++++.+..+..+ ..|.+++|+|++.+++++.++.|++||+.++..
T Consensus 579 g~~Dg~i~iwd~~~~~~~~~~~~~-----------~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~ 635 (694)
T 3dm0_A 579 GGKDGVVLLWDLAEGKKLYSLEAN-----------SVIHALCFSPNRYWLCAATEHGIKIWDLESKSI 635 (694)
T ss_dssp EETTSBCEEEETTTTEEEECCBCS-----------SCEEEEEECSSSSEEEEEETTEEEEEETTTTEE
T ss_pred EeCCCeEEEEECCCCceEEEecCC-----------CcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCC
Confidence 999999999999999988887654 579999999998877778888899999988753
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-32 Score=208.59 Aligned_cols=194 Identities=15% Similarity=0.212 Sum_probs=164.3
Q ss_pred ccccccCceEEEEEeC-CCCeEEEeeccCCCccEEEEeCCCccc----ccceeeeeeecCCceEEEEecCC-CEEEEEcC
Q psy7433 2 TYQCHNKITSDFVFLG-SCSLVATAGHSSESKNVCLWDSLLPQK----KALVQAFVCHDQGASSLVFAPQH-QLLISAGK 75 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~-~~~~l~~~g~~s~~~~i~iwd~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~ 75 (213)
++.+|.+.|.+++|+| ++++|+++ +.|+.|++||+..... ...+..+.+|...|.+++|+|++ ++|++++.
T Consensus 76 ~~~~h~~~V~~~~~~p~~~~~l~s~---s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~ 152 (402)
T 2aq5_A 76 LVCGHTAPVLDIAWCPHNDNVIASG---SEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGC 152 (402)
T ss_dssp CBCCCSSCEEEEEECTTCTTEEEEE---ETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEET
T ss_pred eEecCCCCEEEEEeCCCCCCEEEEE---eCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcC
Confidence 4678999999999999 99999999 6899999999953211 15677888999999999999998 69999999
Q ss_pred CCcEEEEeccCceEEEec--ccCCCCeeEEEecCCCCEEEEecCCCcee-------------------eceEEEEEccCC
Q psy7433 76 KGDICVIDLRQRVIRSRF--NAHESPVKCLAIDPHEEFFVTGAGDGDIK-------------------SPVKCLAIDPHE 134 (213)
Q Consensus 76 d~~v~iwd~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-------------------~~v~~~~~~~~~ 134 (213)
|+.|++||+++++.+..+ ..|...|.+++|+|+++.|++++.|+.++ ..+.++.|+|++
T Consensus 153 dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (402)
T 2aq5_A 153 DNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEG 232 (402)
T ss_dssp TSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTT
T ss_pred CCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCC
Confidence 999999999999999888 78999999999999999999999999886 237889999999
Q ss_pred ceEEEe---cCCCcEEEEEccCCee-eeeecCCCCceeEEEecCCCeEEEEeCCCC-eEE-EEecCCcEEEEeCCCCcc
Q psy7433 135 EFFVTG---AGDGDIKVWSLSGNHL-LYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLF-SCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 135 ~~l~~~---~~dg~i~v~d~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~-s~~~d~~i~iw~~~~~~~ 207 (213)
+++++| +.|+.|++||+++.+. +....... ...+.+++|+|++ .|+ +++.|+.|++||+.+++.
T Consensus 233 ~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~---------~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~ 302 (402)
T 2aq5_A 233 KILTTGFSRMSERQVALWDTKHLEEPLSLQELDT---------SSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAP 302 (402)
T ss_dssp EEEEEEECTTCCEEEEEEETTBCSSCSEEEECCC---------CSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTT
T ss_pred cEEEEeccCCCCceEEEEcCccccCCceEEeccC---------CCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCc
Confidence 999999 8999999999987654 22222211 2679999999965 454 555799999999998764
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-32 Score=205.93 Aligned_cols=188 Identities=15% Similarity=0.278 Sum_probs=159.5
Q ss_pred ccccccCceEEEEEeCCC-CeEEEeeccCCCccEEEEeCCCcccccceeeee--eecCCceEEEEec-CCCEEEEEcCCC
Q psy7433 2 TYQCHNKITSDFVFLGSC-SLVATAGHSSESKNVCLWDSLLPQKKALVQAFV--CHDQGASSLVFAP-QHQLLISAGKKG 77 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~-~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~~~-~~~~l~~~~~d~ 77 (213)
++.+|.+.|++++|+|++ ++|+++ +.|+.|++||+. .......+. +|...|.+++|+| ++++|++++.|+
T Consensus 68 ~~~~h~~~v~~~~~~~~~~~~l~s~---~~dg~i~iwd~~---~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~ 141 (383)
T 3ei3_B 68 TASPFDRRVTSLEWHPTHPTTVAVG---SKGGDIILWDYD---VQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRG 141 (383)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEE---EBTSCEEEEETT---STTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTT
T ss_pred eccCCCCCEEEEEECCCCCCEEEEE---cCCCeEEEEeCC---CcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCC
Confidence 467899999999999999 899999 689999999994 344444443 6899999999999 789999999999
Q ss_pred cEEEEeccCceEEEeccc---CCCCeeEEEecCCCCEEEEecCCCcee----------------eceEEEEEccCCc-eE
Q psy7433 78 DICVIDLRQRVIRSRFNA---HESPVKCLAIDPHEEFFVTGAGDGDIK----------------SPVKCLAIDPHEE-FF 137 (213)
Q Consensus 78 ~v~iwd~~~~~~~~~~~~---~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------~~v~~~~~~~~~~-~l 137 (213)
.|++||+++. .+..+.. +...+.+++|+|+++.|++++.|+.++ ..|.+++|+|+++ ++
T Consensus 142 ~i~iwd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 220 (383)
T 3ei3_B 142 ATTLRDFSGS-VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDWLM 220 (383)
T ss_dssp EEEEEETTSC-EEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEECSSSCEEEEEECSSCTTEE
T ss_pred EEEEEECCCC-ceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEeccCCCcEEEEEECCCCCCEE
Confidence 9999999864 3444433 347899999999999999999999885 6799999999999 99
Q ss_pred EEecCCCcEEEEEccC----CeeeeeecCCCCceeEEEecCCCeEEEEeCC-CC-eEEEEecCCcEEEEeCCCCcc
Q psy7433 138 VTGAGDGDIKVWSLSG----NHLLYNFPGEHARSSFFKHIGQGVTQLHVDG-GS-RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 138 ~~~~~dg~i~v~d~~~----~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~-~l~s~~~d~~i~iw~~~~~~~ 207 (213)
++++.|+.|++||+++ +..+..+ .|. ..|.+++|+| ++ +|++++.|+.|++||+.+...
T Consensus 221 ~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~----------~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~ 285 (383)
T 3ei3_B 221 ATSSVDATVKLWDLRNIKDKNSYIAEM-PHE----------KPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSK 285 (383)
T ss_dssp EEEETTSEEEEEEGGGCCSTTCEEEEE-ECS----------SCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTS
T ss_pred EEEeCCCEEEEEeCCCCCcccceEEEe-cCC----------CceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcc
Confidence 9999999999999987 4555555 333 7899999999 65 689999999999999987654
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-33 Score=210.15 Aligned_cols=190 Identities=14% Similarity=0.170 Sum_probs=154.5
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
++++|.+.|.+++|+|++++|+++ +.|+.|++||++..........+..|...|.+++|+|++++|++++.|+.|++
T Consensus 50 ~~~~h~~~v~~~~~s~~~~~l~s~---s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 126 (377)
T 3dwl_C 50 TFSDHDKIVTCVDWAPKSNRIVTC---SQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISV 126 (377)
T ss_dssp CBCCCSSCEEEEEECTTTCCEEEE---ETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEE
T ss_pred EEecCCceEEEEEEeCCCCEEEEE---eCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEE
Confidence 578999999999999999999999 68999999999543323356667789999999999999999999999999999
Q ss_pred EeccCce---EEEeccc-CCCCeeEEEecCCCCEEEEecCCCcee----------------------------------e
Q psy7433 82 IDLRQRV---IRSRFNA-HESPVKCLAIDPHEEFFVTGAGDGDIK----------------------------------S 123 (213)
Q Consensus 82 wd~~~~~---~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------------------------~ 123 (213)
||+++++ ....+.. |...|.+++|+|++++|++++.|+.++ .
T Consensus 127 wd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (377)
T 3dwl_C 127 CYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGG 206 (377)
T ss_dssp CCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSS
T ss_pred EEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCc
Confidence 9999876 3666776 899999999999999999999999875 1
Q ss_pred ceEEEEEccCCceEEEecCCCcEEEEEccCCee----eeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEE
Q psy7433 124 PVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHL----LYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKV 199 (213)
Q Consensus 124 ~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~i 199 (213)
.|.+++|+|++++|++++.||.|++||+++++. +..+..|. ..|.+++|+|++.+++++.++.+.+
T Consensus 207 ~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~----------~~v~~~~~s~~~~~l~~~~~~~~~~ 276 (377)
T 3dwl_C 207 WVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQ----------LPLRSLLWANESAIVAAGYNYSPIL 276 (377)
T ss_dssp SEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSS----------SCEEEEEEEETTEEEEEESSSSEEE
T ss_pred eEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCC----------CceEEEEEcCCCCEEEEEcCCcEEE
Confidence 288999999999999999999999999998876 67777765 7899999999876444445555667
Q ss_pred EeCCC
Q psy7433 200 RQLPD 204 (213)
Q Consensus 200 w~~~~ 204 (213)
|+...
T Consensus 277 ~~~~~ 281 (377)
T 3dwl_C 277 LQGNE 281 (377)
T ss_dssp ECCCC
T ss_pred EEeCC
Confidence 77763
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-33 Score=216.63 Aligned_cols=189 Identities=14% Similarity=0.122 Sum_probs=159.7
Q ss_pred cccccCceEEEEEeCC------CCeEEEeeccCCCccEEEEeCCCcccc--------cceeeeeeecCCceEEEEecCCC
Q psy7433 3 YQCHNKITSDFVFLGS------CSLVATAGHSSESKNVCLWDSLLPQKK--------ALVQAFVCHDQGASSLVFAPQHQ 68 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~------~~~l~~~g~~s~~~~i~iwd~~~~~~~--------~~~~~~~~~~~~v~~~~~~~~~~ 68 (213)
+.+|.+.|++++|+|+ +.+||++ +.|++|++||+...... .....+.+|...|++++|++++
T Consensus 203 l~~~~~~V~~v~wsp~~~~~~~~~~LAs~---s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~- 278 (524)
T 2j04_B 203 IVHSFGEVWDLKWHEGCHAPHLVGCLSFV---SQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT- 278 (524)
T ss_dssp EEECCCSEEEEEECSSCCCSSSSCEEEEE---ETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-
T ss_pred EEecCCcEEEEEECCCCCCCCCCceEEEE---ecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-
Confidence 5577889999999996 5799999 68999999999543211 1234677889999999999864
Q ss_pred EEEEEcCCCcEEEEeccCc-eEEEecccCCCCeeEE--EecCCC-CEEEEecCCCcee-------------------ece
Q psy7433 69 LLISAGKKGDICVIDLRQR-VIRSRFNAHESPVKCL--AIDPHE-EFFVTGAGDGDIK-------------------SPV 125 (213)
Q Consensus 69 ~l~~~~~d~~v~iwd~~~~-~~~~~~~~~~~~i~~~--~~~~~~-~~l~~~~~~~~i~-------------------~~v 125 (213)
.|++|+.||+|++||++++ .+...+..|...|.++ +|+|++ .+|++++.|++++ ..+
T Consensus 279 ~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v 358 (524)
T 2j04_B 279 TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNL 358 (524)
T ss_dssp EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSC
T ss_pred eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcc
Confidence 8999999999999999976 3445678899999999 578887 8999999999987 136
Q ss_pred EEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCC
Q psy7433 126 KCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 126 ~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~ 204 (213)
.+++|+|+++.+++++.|+.|++||++++.++..+.+|. ..|++++|+|++ .|++|+.|+.|++||+..
T Consensus 359 ~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~----------~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 359 VPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRE----------TTITAIGVSRLHPMVLAGSADGSLIITNAAR 428 (524)
T ss_dssp CCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECS----------SCEEEEECCSSCCBCEEEETTTEEECCBSCS
T ss_pred cceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCC----------CceEEEEeCCCCCeEEEEECCCEEEEEechH
Confidence 789999999999999999999999999988777777765 789999999965 599999999999999865
Q ss_pred C
Q psy7433 205 R 205 (213)
Q Consensus 205 ~ 205 (213)
.
T Consensus 429 ~ 429 (524)
T 2j04_B 429 R 429 (524)
T ss_dssp S
T ss_pred h
Confidence 3
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-32 Score=222.93 Aligned_cols=192 Identities=18% Similarity=0.270 Sum_probs=166.9
Q ss_pred CccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecC--CCEEEEEcCCCc
Q psy7433 1 MTYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQ--HQLLISAGKKGD 78 (213)
Q Consensus 1 ~~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~ 78 (213)
.++++|.++|++++|+|++++|+++ +.||.|++||+.. .+...+..+.+|...|.+++|+|+ +++|++|+.||.
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg---~~dg~I~vwd~~~-~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~ 78 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATC---SSDKTIKIFEVEG-ETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 78 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEE---ETTTEEEEEEEET-TEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSC
T ss_pred eecccCcceeEEEEECCCCCeEEEE---ECCCcEEEEecCC-CCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCe
Confidence 3688999999999999999999999 6899999999842 255677788899999999999987 999999999999
Q ss_pred EEEEeccCce--EEEecccCCCCeeEEEecCC--CCEEEEecCCCcee-------------------eceEEEEEcc---
Q psy7433 79 ICVIDLRQRV--IRSRFNAHESPVKCLAIDPH--EEFFVTGAGDGDIK-------------------SPVKCLAIDP--- 132 (213)
Q Consensus 79 v~iwd~~~~~--~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~~~~i~-------------------~~v~~~~~~~--- 132 (213)
|++||+++++ ....+..|...|.+++|+|+ ++.+++++.|+.++ ..|.+++|+|
T Consensus 79 I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~ 158 (753)
T 3jro_A 79 VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATI 158 (753)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC-
T ss_pred EEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccc
Confidence 9999999986 67777889999999999999 99999999999886 6789999999
Q ss_pred ----------CCceEEEecCCCcEEEEEccCC----eeeeeecCCCCceeEEEecCCCeEEEEeCCC---C-eEEEEecC
Q psy7433 133 ----------HEEFFVTGAGDGDIKVWSLSGN----HLLYNFPGEHARSSFFKHIGQGVTQLHVDGG---S-RLFSCGAD 194 (213)
Q Consensus 133 ----------~~~~l~~~~~dg~i~v~d~~~~----~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~-~l~s~~~d 194 (213)
+++++++|+.||.|++||++++ .....+..|. ..|.+++|+|+ + .|++++.|
T Consensus 159 ~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~----------~~V~~l~~sp~~~~~~~l~s~s~D 228 (753)
T 3jro_A 159 EEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS----------DWVRDVAWSPTVLLRSYLASVSQD 228 (753)
T ss_dssp --------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCS----------SCEEEEEECCCCSSSEEEEEEESS
T ss_pred ccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCC----------CcEEEEEeccCCCCCCEEEEEecC
Confidence 5889999999999999999876 5556666665 78999999997 5 58999999
Q ss_pred CcEEEEeCCCCc
Q psy7433 195 GSMKVRQLPDRD 206 (213)
Q Consensus 195 ~~i~iw~~~~~~ 206 (213)
|.|++||+.++.
T Consensus 229 g~I~iwd~~~~~ 240 (753)
T 3jro_A 229 RTCIIWTQDNEQ 240 (753)
T ss_dssp SCEEEEEESSSS
T ss_pred CEEEEecCCCCC
Confidence 999999998863
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-32 Score=206.38 Aligned_cols=187 Identities=17% Similarity=0.198 Sum_probs=161.9
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCc
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR 87 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~ 87 (213)
..+....|+|++++|+++ +.|+.|++||+ ........+..|...|.+++|+|++++|++++.|+.|++||++++
T Consensus 98 ~~~~~~~~~~~~~~l~~~---~~dg~i~iwd~---~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~ 171 (420)
T 3vl1_A 98 DYTAVDTAKLQMRRFILG---TTEGDIKVLDS---NFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDG 171 (420)
T ss_dssp CEEEEEEECSSSCEEEEE---ETTSCEEEECT---TSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred CceEEEEEecCCCEEEEE---ECCCCEEEEeC---CCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCC
Confidence 445555789999999999 68999999998 456666677789999999999999999999999999999999999
Q ss_pred eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee--------------------ece---------------------E
Q psy7433 88 VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK--------------------SPV---------------------K 126 (213)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~--------------------~~v---------------------~ 126 (213)
+.+..+.+|...|.+++|+|+++.|++++.|+.++ ..+ .
T Consensus 172 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~ 251 (420)
T 3vl1_A 172 SNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKN 251 (420)
T ss_dssp CCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCC
T ss_pred cCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCccc
Confidence 98889999999999999999999999999999886 223 3
Q ss_pred EEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC--eEEEEecCCcEEEEeCCC
Q psy7433 127 CLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS--RLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 127 ~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~~d~~i~iw~~~~ 204 (213)
+++|+|++++|++++.||.|++||+++++....+...+ ...|.+++|+|++ +|++++.||.|++||+.+
T Consensus 252 ~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---------~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~ 322 (420)
T 3vl1_A 252 NLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKF---------TCSCNSLTVDGNNANYIYAGYENGMLAQWDLRS 322 (420)
T ss_dssp TTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTT---------SSCEEEEEECSSCTTEEEEEETTSEEEEEETTC
T ss_pred ceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEccccc---------CCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCC
Confidence 35567899999999999999999999988877776533 2689999999964 699999999999999998
Q ss_pred Ccccc
Q psy7433 205 RDAVV 209 (213)
Q Consensus 205 ~~~~~ 209 (213)
++.++
T Consensus 323 ~~~~~ 327 (420)
T 3vl1_A 323 PECPV 327 (420)
T ss_dssp TTSCS
T ss_pred CcCch
Confidence 76543
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-31 Score=197.36 Aligned_cols=189 Identities=17% Similarity=0.312 Sum_probs=167.3
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEec
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDL 84 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~ 84 (213)
+|...|.+++|+|++++|+++ +.|+.|++||++.. .......+..|...+.+++|+|++++|++++.|+.|++||+
T Consensus 95 ~~~~~v~~~~~~~~~~~l~~~---~~d~~i~~~d~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~ 170 (337)
T 1gxr_A 95 NRDNYIRSCKLLPDGCTLIVG---GEASTLSIWDLAAP-TPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL 170 (337)
T ss_dssp CTTSBEEEEEECTTSSEEEEE---ESSSEEEEEECCCC---EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred CCCCcEEEEEEcCCCCEEEEE---cCCCcEEEEECCCC-CcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeC
Confidence 789999999999999999999 68999999999532 22355667788899999999999999999999999999999
Q ss_pred cCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee----------------eceEEEEEccCCceEEEecCCCcEEE
Q psy7433 85 RQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----------------SPVKCLAIDPHEEFFVTGAGDGDIKV 148 (213)
Q Consensus 85 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------~~v~~~~~~~~~~~l~~~~~dg~i~v 148 (213)
++++.+..+..|...+.+++|+|+++.+++++.++.++ ..+.+++|+|+++++++++.++.|++
T Consensus 171 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~ 250 (337)
T 1gxr_A 171 HNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEV 250 (337)
T ss_dssp TTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred CCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEE
Confidence 99999999999999999999999999999999999886 67899999999999999999999999
Q ss_pred EEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCccc
Q psy7433 149 WSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 149 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
||+++++.. .+..|. ..|.+++|+|++ +|++++.||.|++||+.+++..
T Consensus 251 ~~~~~~~~~-~~~~~~----------~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 251 LHVNKPDKY-QLHLHE----------SCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASI 300 (337)
T ss_dssp EETTSSCEE-EECCCS----------SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred EECCCCCeE-EEcCCc----------cceeEEEECCCCCEEEEecCCCcEEEEECCCCeEE
Confidence 999887654 444544 789999999965 6999999999999999987654
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-32 Score=221.31 Aligned_cols=200 Identities=19% Similarity=0.294 Sum_probs=165.8
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
+|++|.+.|.+++|+|++++||++ +.+|.|++||+ .++..+..+..|...|.+++|+|++++|++++.||.|++
T Consensus 8 ~~~~h~~~v~~i~~sp~~~~la~~---~~~g~v~iwd~---~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v 81 (814)
T 3mkq_A 8 TFSNRSDRVKGIDFHPTEPWVLTT---LYSGRVEIWNY---ETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRV 81 (814)
T ss_dssp EEEEECSCEEEEEECSSSSEEEEE---ETTSEEEEEET---TTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEE
T ss_pred eeecCCCceEEEEECCCCCEEEEE---eCCCEEEEEEC---CCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEE
Confidence 578999999999999999999999 68999999998 567788888899999999999999999999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee------------------eceEEEEEcc-CCceEEEecC
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------SPVKCLAIDP-HEEFFVTGAG 142 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------~~v~~~~~~~-~~~~l~~~~~ 142 (213)
||+.+++.+..+..|...|.+++|+|+++.+++++.|+.++ ..+.+++|+| +++++++++.
T Consensus 82 w~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~ 161 (814)
T 3mkq_A 82 FNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCL 161 (814)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEET
T ss_pred EECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeC
Confidence 99999999999999999999999999999999999999876 5677888888 6778888888
Q ss_pred CCcEEEEEccCCeeeeeec-----------------C-----------------CC-CceeEEEecCCCeEEEEeCCCC-
Q psy7433 143 DGDIKVWSLSGNHLLYNFP-----------------G-----------------EH-ARSSFFKHIGQGVTQLHVDGGS- 186 (213)
Q Consensus 143 dg~i~v~d~~~~~~~~~~~-----------------~-----------------~~-~~~~~~~~~~~~v~~~~~~~~~- 186 (213)
||.|++||++++.....+. + .. ........+...|.+++|+|++
T Consensus 162 dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~ 241 (814)
T 3mkq_A 162 DRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLP 241 (814)
T ss_dssp TSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSS
T ss_pred CCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCC
Confidence 8888888875432211110 0 00 0011123355789999999965
Q ss_pred eEEEEecCCcEEEEeCCCCcc
Q psy7433 187 RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 187 ~l~s~~~d~~i~iw~~~~~~~ 207 (213)
.+++++.||.|++||+.+++.
T Consensus 242 ~l~~~~~dg~v~vwd~~~~~~ 262 (814)
T 3mkq_A 242 IIISGSEDGTLKIWNSSTYKV 262 (814)
T ss_dssp EEEEEETTSCEEEEETTTCSE
T ss_pred EEEEEeCCCeEEEEECCCCcE
Confidence 699999999999999987643
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-32 Score=207.07 Aligned_cols=193 Identities=13% Similarity=0.218 Sum_probs=167.5
Q ss_pred ccccccCceEEEEEeCC-CCeEEEeeccCCCccEEEEeCCCcc------cccceeeeeeecCCceEEEEecC-CCEEEEE
Q psy7433 2 TYQCHNKITSDFVFLGS-CSLVATAGHSSESKNVCLWDSLLPQ------KKALVQAFVCHDQGASSLVFAPQ-HQLLISA 73 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~-~~~l~~~g~~s~~~~i~iwd~~~~~------~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~ 73 (213)
++.+|.+.|.+++|+|+ +++|+++ +.|+.|++||++... ..........|...+.+++|+|+ +.+|+++
T Consensus 108 ~~~~h~~~v~~~~~~~~~~~~l~s~---~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 184 (416)
T 2pm9_A 108 RFSNHSSSVKTVKFNAKQDNVLASG---GNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASA 184 (416)
T ss_dssp ECCCSSSCCCEEEECSSSTTBEEEE---CSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEE
T ss_pred hccCCccceEEEEEcCCCCCEEEEE---cCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEE
Confidence 46789999999999998 8999999 789999999996433 12223334678899999999998 7899999
Q ss_pred cCCCcEEEEeccCceEEEecccC------CCCeeEEEecCCC-CEEEEecCCC---cee-------------------ec
Q psy7433 74 GKKGDICVIDLRQRVIRSRFNAH------ESPVKCLAIDPHE-EFFVTGAGDG---DIK-------------------SP 124 (213)
Q Consensus 74 ~~d~~v~iwd~~~~~~~~~~~~~------~~~i~~~~~~~~~-~~l~~~~~~~---~i~-------------------~~ 124 (213)
+.|+.|++||+++++.+..+..+ ...+.+++|+|++ ..+++++.++ .++ ..
T Consensus 185 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~ 264 (416)
T 2pm9_A 185 GSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKG 264 (416)
T ss_dssp SSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSC
T ss_pred cCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCc
Confidence 99999999999999988888766 7889999999987 6899999887 654 56
Q ss_pred eEEEEEcc-CCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC--eEEEEecCCcEEEEe
Q psy7433 125 VKCLAIDP-HEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS--RLFSCGADGSMKVRQ 201 (213)
Q Consensus 125 v~~~~~~~-~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~~d~~i~iw~ 201 (213)
|.+++|+| ++++|++++.|+.|++||+++++.+..+..|. ..|.+++|+|++ +|++++.|+.|++|+
T Consensus 265 v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~----------~~v~~~~~s~~~~~~l~s~~~d~~i~iw~ 334 (416)
T 2pm9_A 265 ILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARG----------NWCFKTKFAPEAPDLFACASFDNKIEVQT 334 (416)
T ss_dssp EEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSS----------SCCCCEEECTTCTTEEEECCSSSEEEEEE
T ss_pred eeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCC----------CceEEEEECCCCCCEEEEEecCCcEEEEE
Confidence 89999999 89999999999999999999999999988876 789999999964 699999999999999
Q ss_pred CCCCcc
Q psy7433 202 LPDRDA 207 (213)
Q Consensus 202 ~~~~~~ 207 (213)
+.+...
T Consensus 335 ~~~~~~ 340 (416)
T 2pm9_A 335 LQNLTN 340 (416)
T ss_dssp SCCCCC
T ss_pred ccCCCC
Confidence 987654
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-32 Score=201.98 Aligned_cols=189 Identities=17% Similarity=0.211 Sum_probs=155.1
Q ss_pred ccccccCceEEEEEeC--CCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecC--CCEEEEEcCCC
Q psy7433 2 TYQCHNKITSDFVFLG--SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQ--HQLLISAGKKG 77 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~--~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~ 77 (213)
+|++|.++|++++|+| ++++|+++ +.|++|++||++.. .......+.+|...|.+++|+|+ +.+|++++.|+
T Consensus 52 ~l~gH~~~V~~v~~~~~~~~~~l~s~---s~D~~v~iWd~~~~-~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~ 127 (316)
T 3bg1_A 52 DLRGHEGPVWQVAWAHPMYGNILASC---SYDRKVIIWREENG-TWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDG 127 (316)
T ss_dssp EEECCSSCEEEEEECCGGGSSCEEEE---ETTSCEEEECCSSS-CCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSS
T ss_pred EEcCCCccEEEEEeCCCCCCCEEEEE---ECCCEEEEEECCCC-cceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCC
Confidence 4789999999999986 48999999 68999999998532 12355667789999999999997 78999999999
Q ss_pred cEEEEeccCce---EEEecccCCCCeeEEEecCC-----------------CCEEEEecCCCcee---------------
Q psy7433 78 DICVIDLRQRV---IRSRFNAHESPVKCLAIDPH-----------------EEFFVTGAGDGDIK--------------- 122 (213)
Q Consensus 78 ~v~iwd~~~~~---~~~~~~~~~~~i~~~~~~~~-----------------~~~l~~~~~~~~i~--------------- 122 (213)
.|++||++++. ....+..|...+.+++|+|+ +++|++++.|+.++
T Consensus 128 ~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~ 207 (316)
T 3bg1_A 128 AISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQK 207 (316)
T ss_dssp CEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEEC
T ss_pred CEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeee
Confidence 99999998753 23456678889999999997 46899999998775
Q ss_pred -----eceEEEEEccCC----ceEEEecCCCcEEEEEccCCe----eeeeecCCCCceeEEEecCCCeEEEEeCCCC-eE
Q psy7433 123 -----SPVKCLAIDPHE----EFFVTGAGDGDIKVWSLSGNH----LLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RL 188 (213)
Q Consensus 123 -----~~v~~~~~~~~~----~~l~~~~~dg~i~v~d~~~~~----~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l 188 (213)
..|.+++|+|++ ++|++++.|+.|++||+++.. ....+..| ...|.+++|+|++ +|
T Consensus 208 l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~----------~~~v~~v~~sp~g~~l 277 (316)
T 3bg1_A 208 LEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKF----------NDVVWHVSWSITANIL 277 (316)
T ss_dssp CBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEEC----------SSCEEEEEECTTTCCE
T ss_pred cccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcC----------CCcEEEEEEcCCCCEE
Confidence 458999999986 789999999999999987521 11122222 3789999999965 69
Q ss_pred EEEecCCcEEEEeCCC
Q psy7433 189 FSCGADGSMKVRQLPD 204 (213)
Q Consensus 189 ~s~~~d~~i~iw~~~~ 204 (213)
++++.|+.|++|+...
T Consensus 278 as~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 278 AVSGGDNKVTLWKESV 293 (316)
T ss_dssp EEEESSSCEEEEEECT
T ss_pred EEEcCCCeEEEEEECC
Confidence 9999999999999863
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-31 Score=196.71 Aligned_cols=189 Identities=20% Similarity=0.272 Sum_probs=165.2
Q ss_pred ccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeee--eecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 4 QCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV--CHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 4 ~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
.+|.+.|.+++|+|++++|+++ + |+.|++||++.......+..+. .|...+.+++|+|++++|++++.|+.|++
T Consensus 48 ~~h~~~v~~~~~~~~~~~l~~~---~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 123 (337)
T 1gxr_A 48 LNHGEVVCAVTISNPTRHVYTG---G-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSI 123 (337)
T ss_dssp ECCSSCCCEEEECSSSSEEEEE---C-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEE
T ss_pred ccCCCceEEEEEecCCcEEEEc---C-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEE
Confidence 4799999999999999999999 6 9999999996544444444444 68889999999999999999999999999
Q ss_pred EeccCce--EEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecC
Q psy7433 82 IDLRQRV--IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAG 142 (213)
Q Consensus 82 wd~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~ 142 (213)
||+++++ ....+..+...+.+++|+|+++.+++++.++.++ ..+.+++|+|+++++++++.
T Consensus 124 ~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 203 (337)
T 1gxr_A 124 WDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGL 203 (337)
T ss_dssp EECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEec
Confidence 9999876 5667778889999999999999999999999886 67999999999999999999
Q ss_pred CCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCcc
Q psy7433 143 DGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 143 dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~ 207 (213)
||.|++||+++++.+..+... ..+.+++|+|++ .|++++.|+.|++||+.+.+.
T Consensus 204 dg~i~~~d~~~~~~~~~~~~~-----------~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~ 258 (337)
T 1gxr_A 204 DNTVRSWDLREGRQLQQHDFT-----------SQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK 258 (337)
T ss_dssp TSEEEEEETTTTEEEEEEECS-----------SCEEEEEECTTSSEEEEEETTSCEEEEETTSSCE
T ss_pred CCcEEEEECCCCceEeeecCC-----------CceEEEEECCCCCEEEEEcCCCcEEEEECCCCCe
Confidence 999999999999888777542 679999999965 689999999999999987653
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-32 Score=201.65 Aligned_cols=184 Identities=16% Similarity=0.230 Sum_probs=149.3
Q ss_pred ccCceEEEEEeCC----CCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec-CCCEEEEEcCCCcEE
Q psy7433 6 HNKITSDFVFLGS----CSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP-QHQLLISAGKKGDIC 80 (213)
Q Consensus 6 h~~~v~~~~~~~~----~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~ 80 (213)
|.+.|.+++|+|+ +++|+++ +.|+.|++||+ .+.+.+..+.+|...|.+++|+| ++++|++++.||.|+
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~---~~dg~i~v~d~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~ 141 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVA---GSRGIIRIINP---ITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALR 141 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEE---ETTCEEEEECT---TTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEE
T ss_pred CCCcEEEEEeccCCCCCCCEEEEe---cCCCEEEEEEc---hhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEE
Confidence 6688999999998 6789998 68999999999 56677888888999999999999 899999999999999
Q ss_pred EEeccCceEEEec---ccCCCCeeEEEecCCCCEEEEecCCCcee-----------------------------------
Q psy7433 81 VIDLRQRVIRSRF---NAHESPVKCLAIDPHEEFFVTGAGDGDIK----------------------------------- 122 (213)
Q Consensus 81 iwd~~~~~~~~~~---~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------------------------- 122 (213)
+||+++++.+..+ ..|...|.+++|+|+++.|++++.|+.++
T Consensus 142 iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (366)
T 3k26_A 142 LWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHF 221 (366)
T ss_dssp EEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECC
T ss_pred EEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeecc
Confidence 9999999888887 67999999999999999999999998775
Q ss_pred ----------e------------------------------------------------------ceEEEEEccC--Cce
Q psy7433 123 ----------S------------------------------------------------------PVKCLAIDPH--EEF 136 (213)
Q Consensus 123 ----------~------------------------------------------------------~v~~~~~~~~--~~~ 136 (213)
. .|.+++|+|+ +++
T Consensus 222 ~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~ 301 (366)
T 3k26_A 222 PDFSTRDIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKM 301 (366)
T ss_dssp CSEEECSSCSSCCCEEEEETTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSE
T ss_pred CccccccCCcceEEEEEEcCCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcE
Confidence 1 2334555565 666
Q ss_pred EEEecCCCcEEEEEccCCee----eeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCC
Q psy7433 137 FVTGAGDGDIKVWSLSGNHL----LYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLP 203 (213)
Q Consensus 137 l~~~~~dg~i~v~d~~~~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~ 203 (213)
|++++.||.|++||+++++. ...+..|.. ...|.+++|+|++ +|++++.||.|++||+.
T Consensus 302 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~--------~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 302 LALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKC--------GAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp EEEECTTSCEEEEECCSSSGGGCEEEEECCTTC--------CSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred EEEEecCCcEEEEECCCCCCccccceEEccccc--------CCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 66666666666666655432 223444310 3789999999965 69999999999999985
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-31 Score=200.24 Aligned_cols=187 Identities=16% Similarity=0.187 Sum_probs=162.2
Q ss_pred ccccccCceEEEEEeCC---CCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCc
Q psy7433 2 TYQCHNKITSDFVFLGS---CSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGD 78 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~---~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 78 (213)
.+++|.+.|++++|+|+ |++|+++ +.|+.|++||++.. .......+.+|...|.+++|+|++++|++++.||.
T Consensus 34 ~~~~h~~~v~~~~~~~~~~~g~~l~~~---~~dg~i~iw~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~ 109 (368)
T 3mmy_A 34 VTSSPDDSIGCLSFSPPTLPGNFLIAG---SWANDVRCWEVQDS-GQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKT 109 (368)
T ss_dssp CSSCCSSCEEEEEECCTTSSSEEEEEE---ETTSEEEEEEECTT-SCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSE
T ss_pred eccCCCCceEEEEEcCCCCCceEEEEE---CCCCcEEEEEcCCC-CceeEEEeccccCCEEEEEECcCCCEEEEEcCCCc
Confidence 46899999999999998 5999999 68999999999421 22333678889999999999999999999999999
Q ss_pred EEEEeccCceEEEecccCCCCeeEEEe--cCCCCEEEEecCCCcee----------------------------------
Q psy7433 79 ICVIDLRQRVIRSRFNAHESPVKCLAI--DPHEEFFVTGAGDGDIK---------------------------------- 122 (213)
Q Consensus 79 v~iwd~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~~~~~~~~i~---------------------------------- 122 (213)
|++||+++++.+. +..|...|.+++| +|++++|++++.|+.++
T Consensus 110 v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (368)
T 3mmy_A 110 AKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATA 188 (368)
T ss_dssp EEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEG
T ss_pred EEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeC
Confidence 9999999998776 4558999999999 88999999999888654
Q ss_pred -------------------------------------------------------------------------e------
Q psy7433 123 -------------------------------------------------------------------------S------ 123 (213)
Q Consensus 123 -------------------------------------------------------------------------~------ 123 (213)
.
T Consensus 189 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (368)
T 3mmy_A 189 ERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTS 268 (368)
T ss_dssp GGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----C
T ss_pred CCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeeccccccc
Confidence 1
Q ss_pred ------ceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCc
Q psy7433 124 ------PVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGS 196 (213)
Q Consensus 124 ------~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~ 196 (213)
.|.+++|+|++++|++++.||.|++||+++++++..+..|. ..|.+++|+|++ +|++++.|+.
T Consensus 269 ~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~----------~~v~~~~~s~~g~~l~~~s~d~~ 338 (368)
T 3mmy_A 269 APQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLD----------QPISACCFNHNGNIFAYASSYDW 338 (368)
T ss_dssp CCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCS----------SCEEEEEECTTSSCEEEEECCCS
T ss_pred ccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCC----------CCceEEEECCCCCeEEEEecccc
Confidence 59999999999999999999999999999999999998876 789999999965 5999998886
Q ss_pred EEEEeCC
Q psy7433 197 MKVRQLP 203 (213)
Q Consensus 197 i~iw~~~ 203 (213)
.+.|++.
T Consensus 339 ~~~~~~~ 345 (368)
T 3mmy_A 339 SKGHEFY 345 (368)
T ss_dssp TTCGGGC
T ss_pred ccccccc
Confidence 6655544
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-31 Score=193.27 Aligned_cols=189 Identities=17% Similarity=0.230 Sum_probs=170.0
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
.+..|...|.+++|+|++++|+++ +.|+.|++|++......+.+..+..|...+.++.| +++++++++.|+.|++
T Consensus 54 ~~~~~~~~v~~~~~~~~~~~l~~~---~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~ 128 (313)
T 3odt_A 54 VVYTGQGFLNSVCYDSEKELLLFG---GKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKV 128 (313)
T ss_dssp EEEECSSCEEEEEEETTTTEEEEE---ETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEE
T ss_pred EeecCCccEEEEEECCCCCEEEEe---cCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEE
Confidence 356789999999999999999999 68999999999765566778888899999999999 5779999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecC-CCCEEEEecCCCcee----------------eceEEEEEccCCceEEEecCCC
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDP-HEEFFVTGAGDGDIK----------------SPVKCLAIDPHEEFFVTGAGDG 144 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~i~----------------~~v~~~~~~~~~~~l~~~~~dg 144 (213)
|| .++....+..|...+.++++.| +++.+++++.++.++ ..+.+++|+|++. +++++.||
T Consensus 129 ~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg 205 (313)
T 3odt_A 129 WK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDG 205 (313)
T ss_dssp EE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTS
T ss_pred Ec--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCceEEEEeccCcccEEEEEEcCCCe-EEEccCCC
Confidence 99 6777888888999999999998 899999999999876 6799999999998 99999999
Q ss_pred cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCccc
Q psy7433 145 DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 145 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
.|++||+++++.+..+..|. ..|.+++|+|+++|++++.||.|++||+.+++..
T Consensus 206 ~i~i~d~~~~~~~~~~~~~~----------~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~ 259 (313)
T 3odt_A 206 LIKLVDMHTGDVLRTYEGHE----------SFVYCIKLLPNGDIVSCGEDRTVRIWSKENGSLK 259 (313)
T ss_dssp EEEEEETTTCCEEEEEECCS----------SCEEEEEECTTSCEEEEETTSEEEEECTTTCCEE
T ss_pred eEEEEECCchhhhhhhhcCC----------ceEEEEEEecCCCEEEEecCCEEEEEECCCCcee
Confidence 99999999999999988876 7899999999889999999999999999887543
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-31 Score=204.25 Aligned_cols=198 Identities=19% Similarity=0.290 Sum_probs=157.0
Q ss_pred ccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcc--------cccceeeeeeec------------CCceEEEEec
Q psy7433 6 HNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQ--------KKALVQAFVCHD------------QGASSLVFAP 65 (213)
Q Consensus 6 h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~--------~~~~~~~~~~~~------------~~v~~~~~~~ 65 (213)
|.+.|.+++|+|++++||++ +.||.|++||+.... ..+....+.+|. ..|.+++|+|
T Consensus 27 ~~~~V~~v~~s~~g~~la~g---~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~ 103 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATG---DKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLP 103 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEE---ETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECC
T ss_pred ccCcEEEEEECCCCCEEEEE---cCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcC
Confidence 57899999999999999999 689999999985322 112467788887 8899999999
Q ss_pred CC--CEEEEEcCCCcEEEEeccCceEE---------------------------------------Ee-cccCCCCeeEE
Q psy7433 66 QH--QLLISAGKKGDICVIDLRQRVIR---------------------------------------SR-FNAHESPVKCL 103 (213)
Q Consensus 66 ~~--~~l~~~~~d~~v~iwd~~~~~~~---------------------------------------~~-~~~~~~~i~~~ 103 (213)
++ .+|++++.|+.|++||+.+++.. .. ..+|...|.++
T Consensus 104 ~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 183 (447)
T 3dw8_B 104 QKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSI 183 (447)
T ss_dssp CCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEE
T ss_pred CCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEE
Confidence 88 79999999999999999875432 12 35788999999
Q ss_pred EecCCCCEEEEecCCCcee-------------------------eceEEEEEccCC-ceEEEecCCCcEEEEEccCCee-
Q psy7433 104 AIDPHEEFFVTGAGDGDIK-------------------------SPVKCLAIDPHE-EFFVTGAGDGDIKVWSLSGNHL- 156 (213)
Q Consensus 104 ~~~~~~~~l~~~~~~~~i~-------------------------~~v~~~~~~~~~-~~l~~~~~dg~i~v~d~~~~~~- 156 (213)
+|+|+++.|+++ .|+.++ ..|.+++|+|++ ++|++|+.||.|++||+++++.
T Consensus 184 ~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~ 262 (447)
T 3dw8_B 184 SINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALC 262 (447)
T ss_dssp EECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSS
T ss_pred EEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccc
Confidence 999999999998 788776 348999999998 8999999999999999998876
Q ss_pred ---eeeecCCCCce--eEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCccc
Q psy7433 157 ---LYNFPGEHARS--SFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 157 ---~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
...+..+.... ..+..+...|.+++|+|++ +|++++. +.|++||+......
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~ 319 (447)
T 3dw8_B 263 DRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRP 319 (447)
T ss_dssp CTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSC
T ss_pred cceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccc
Confidence 56666654210 0011122389999999976 5777777 99999999873333
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-31 Score=200.96 Aligned_cols=186 Identities=20% Similarity=0.333 Sum_probs=143.0
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEE
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVI 82 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iw 82 (213)
+.+|...|++++|+|+|++||+| +.|+.|++||+ .+.+.+..+.+|...+.++.++ +.+|++|+.|+.+++|
T Consensus 143 ~~~~~~~V~sv~fspdg~~lasg---s~Dg~v~iWd~---~~~~~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~ 214 (420)
T 4gga_A 143 MEQPGEYISSVAWIKEGNYLAVG---TSSAEVQLWDV---QQQKRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHH 214 (420)
T ss_dssp CCSTTCCEEEEEECTTSSEEEEE---ETTSCEEEEET---TTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEE
T ss_pred ecCCCCcEEEEEECCCCCEEEEE---ECCCeEEEEEc---CCCcEEEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEe
Confidence 45788899999999999999999 68999999999 5677888899999999888774 6799999999999999
Q ss_pred eccCc-eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee---------------------eceEEEEEcc--------
Q psy7433 83 DLRQR-VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK---------------------SPVKCLAIDP-------- 132 (213)
Q Consensus 83 d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~---------------------~~v~~~~~~~-------- 132 (213)
|.... ..+..+.+|...+..+.++|+++.+++++.|+.++ ..|.+++|+|
T Consensus 215 d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~ 294 (420)
T 4gga_A 215 DVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLAT 294 (420)
T ss_dssp ETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEE
T ss_pred eecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEE
Confidence 98764 45566677788888888888888888888877664 3344444544
Q ss_pred ------------------------------------CCceEEEec--CCCcEEEEEccCCeeeeeecCCCCceeEEEecC
Q psy7433 133 ------------------------------------HEEFFVTGA--GDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIG 174 (213)
Q Consensus 133 ------------------------------------~~~~l~~~~--~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~ 174 (213)
+++.+++++ .|+.|++||+++++++..+.+| .
T Consensus 295 ~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH----------~ 364 (420)
T 4gga_A 295 GGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGH----------T 364 (420)
T ss_dssp EECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCC----------S
T ss_pred EeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCC----------C
Confidence 444433322 3455555555555555555544 4
Q ss_pred CCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCc
Q psy7433 175 QGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 175 ~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~ 206 (213)
..|++++|+|++ +|+|++.|++|+|||+.+..
T Consensus 365 ~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~ 397 (420)
T 4gga_A 365 SRVLSLTMSPDGATVASAAADETLRLWRCFELD 397 (420)
T ss_dssp SCEEEEEECTTSSCEEEEETTTEEEEECCSCSS
T ss_pred CCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 789999999975 69999999999999997653
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-31 Score=201.41 Aligned_cols=195 Identities=12% Similarity=0.130 Sum_probs=159.4
Q ss_pred cCceEEEEEe----CCCCe-EEEeeccCCCccEEEEeCCCcc---ccccee-----eeee-------ecCCceEEEEecC
Q psy7433 7 NKITSDFVFL----GSCSL-VATAGHSSESKNVCLWDSLLPQ---KKALVQ-----AFVC-------HDQGASSLVFAPQ 66 (213)
Q Consensus 7 ~~~v~~~~~~----~~~~~-l~~~g~~s~~~~i~iwd~~~~~---~~~~~~-----~~~~-------~~~~v~~~~~~~~ 66 (213)
...|.+++|+ |++++ |+++ +.|+.|++||++... ....+. .+.+ |...+.+++|+|+
T Consensus 121 ~~~v~~~~~~~~~~~~~~~~l~~~---~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 197 (397)
T 1sq9_A 121 KHSFWALKWGASNDRLLSHRLVAT---DVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISER 197 (397)
T ss_dssp GSCEEEEEEECCC----CEEEEEE---ETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTT
T ss_pred CCcEEEEEEeeccCCCCceEEEEE---eCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCC
Confidence 5899999999 99999 9998 689999999984300 034444 5543 7889999999999
Q ss_pred CCEEEEEcCCCcEEEEeccCceEEEeccc---C---CCCeeEEEecCCCCEEEEecCC---Ccee--------------e
Q psy7433 67 HQLLISAGKKGDICVIDLRQRVIRSRFNA---H---ESPVKCLAIDPHEEFFVTGAGD---GDIK--------------S 123 (213)
Q Consensus 67 ~~~l~~~~~d~~v~iwd~~~~~~~~~~~~---~---~~~i~~~~~~~~~~~l~~~~~~---~~i~--------------~ 123 (213)
+ +|++++.|+.|++||+++++.+..+.. | ...+.+++|+|++++|++++.+ +.++ .
T Consensus 198 ~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~ 276 (397)
T 1sq9_A 198 G-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSV 276 (397)
T ss_dssp S-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECB
T ss_pred c-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceecc
Confidence 9 999999999999999999999999988 8 8999999999999999999999 7765 2
Q ss_pred ----------------ceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeec------CCCCce-----eEEEecCCC
Q psy7433 124 ----------------PVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFP------GEHARS-----SFFKHIGQG 176 (213)
Q Consensus 124 ----------------~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~------~~~~~~-----~~~~~~~~~ 176 (213)
.|.+++|+|++++|++++.||.|++||+++++.+..+. .|.... .....+...
T Consensus 277 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 356 (397)
T 1sq9_A 277 PTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPG 356 (397)
T ss_dssp C--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCC
T ss_pred CcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCc
Confidence 47899999999999999999999999999999999888 540000 000111378
Q ss_pred eEEEEeCCCC-----------eEEEEecCCcEEEEeCCCC
Q psy7433 177 VTQLHVDGGS-----------RLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 177 v~~~~~~~~~-----------~l~s~~~d~~i~iw~~~~~ 205 (213)
|.+++|+|++ .|++++.||.|++|++.++
T Consensus 357 v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 357 VFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp EEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred eeEEEeccccccccccccccceEEEecCCCcEEEEEcCCC
Confidence 9999999974 7999999999999999875
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-31 Score=199.34 Aligned_cols=190 Identities=18% Similarity=0.256 Sum_probs=160.1
Q ss_pred ccccccCceEEEEEeCC--CCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecC--CCEEEEEcCCC
Q psy7433 2 TYQCHNKITSDFVFLGS--CSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQ--HQLLISAGKKG 77 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~--~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~ 77 (213)
++.+|.+.|++++|+|+ +++|+++ +.|+.|++||++.. ....+..+..|...|.+++|+|+ +++|++++.|+
T Consensus 50 ~~~~h~~~v~~~~~~~~~~~~~l~s~---~~dg~v~iwd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~ 125 (379)
T 3jrp_A 50 TLTGHEGPVWRVDWAHPKFGTILASC---SYDGKVLIWKEENG-RWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDG 125 (379)
T ss_dssp EECCCSSCEEEEEECCGGGCSEEEEE---ETTSCEEEEEEETT-EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred EecCCCCcEEEEEeCCCCCCCEEEEe---ccCCEEEEEEcCCC-ceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCC
Confidence 46789999999999987 9999999 68999999998421 12266677789999999999998 99999999999
Q ss_pred cEEEEeccCc--eEEEecccCCCCeeEEEecC-------------CCCEEEEecCCCcee--------------------
Q psy7433 78 DICVIDLRQR--VIRSRFNAHESPVKCLAIDP-------------HEEFFVTGAGDGDIK-------------------- 122 (213)
Q Consensus 78 ~v~iwd~~~~--~~~~~~~~~~~~i~~~~~~~-------------~~~~l~~~~~~~~i~-------------------- 122 (213)
.|++||++++ .....+..|...+.+++|+| ++..+++++.|+.++
T Consensus 126 ~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h 205 (379)
T 3jrp_A 126 KVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH 205 (379)
T ss_dssp EEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCC
T ss_pred cEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecc
Confidence 9999999887 34445667899999999999 689999999999886
Q ss_pred -eceEEEEEccC---CceEEEecCCCcEEEEEccCCe-----eeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEe
Q psy7433 123 -SPVKCLAIDPH---EEFFVTGAGDGDIKVWSLSGNH-----LLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCG 192 (213)
Q Consensus 123 -~~v~~~~~~~~---~~~l~~~~~dg~i~v~d~~~~~-----~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~ 192 (213)
..|.+++|+|+ +++|++++.||.|++||++++. .......+. ..|.+++|+|++ +|++++
T Consensus 206 ~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~----------~~v~~~~~s~~g~~l~~~~ 275 (379)
T 3jrp_A 206 SDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFP----------DVLWRASWSLSGNVLALSG 275 (379)
T ss_dssp SSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCS----------SCEEEEEECSSSCCEEEEE
T ss_pred cCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCC----------CcEEEEEEcCCCCEEEEec
Confidence 56889999999 8999999999999999998753 222222232 689999999965 589999
Q ss_pred cCCcEEEEeCCCC
Q psy7433 193 ADGSMKVRQLPDR 205 (213)
Q Consensus 193 ~d~~i~iw~~~~~ 205 (213)
.||.|++|++...
T Consensus 276 ~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 276 GDNKVTLWKENLE 288 (379)
T ss_dssp SSSSEEEEEEEET
T ss_pred CCCcEEEEeCCCC
Confidence 9999999999743
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-31 Score=198.98 Aligned_cols=187 Identities=12% Similarity=0.127 Sum_probs=162.2
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccc--eeeeeeecCCceEEEEecCCCEEEEEcCCCcE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKAL--VQAFVCHDQGASSLVFAPQHQLLISAGKKGDI 79 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v 79 (213)
++.+|...|.+++|+|++++|+++ +.|+.|++||++ ..+. ...+..|...+.+++|+|++++|++++.|+.|
T Consensus 47 ~~~~h~~~v~~~~~~~~~~~l~~~---~~dg~i~vwd~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v 120 (372)
T 1k8k_C 47 ELKEHNGQVTGVDWAPDSNRIVTC---GTDRNAYVWTLK---GRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVI 120 (372)
T ss_dssp EEECCSSCEEEEEEETTTTEEEEE---ETTSCEEEEEEE---TTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSE
T ss_pred eecCCCCcccEEEEeCCCCEEEEE---cCCCeEEEEECC---CCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEE
Confidence 467899999999999999999999 689999999984 3332 33345688899999999999999999999999
Q ss_pred EEEeccCce----EEEecccCCCCeeEEEecCCCCEEEEecCCCcee---------------------------------
Q psy7433 80 CVIDLRQRV----IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK--------------------------------- 122 (213)
Q Consensus 80 ~iwd~~~~~----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~--------------------------------- 122 (213)
++||++.++ .......|...+.+++|+|++++|++++.|+.++
T Consensus 121 ~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (372)
T 1k8k_C 121 SICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSS 200 (372)
T ss_dssp EEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCC
T ss_pred EEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCC
Confidence 999998875 2233356788999999999999999999988663
Q ss_pred --eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEE
Q psy7433 123 --SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVR 200 (213)
Q Consensus 123 --~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw 200 (213)
..+.+++|+|++++|++++.|+.|++||+++++.+..+..+. .+|.+++|+|++.+++++.|+.|++|
T Consensus 201 ~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~----------~~v~~~~~~~~~~~l~~~~d~~i~i~ 270 (372)
T 1k8k_C 201 SCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASET----------LPLLAVTFITESSLVAAGHDCFPVLF 270 (372)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSS----------CCEEEEEEEETTEEEEEETTSSCEEE
T ss_pred CCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCC----------CCeEEEEEecCCCEEEEEeCCeEEEE
Confidence 468999999999999999999999999999999998888775 68999999998876666699999999
Q ss_pred eCCC
Q psy7433 201 QLPD 204 (213)
Q Consensus 201 ~~~~ 204 (213)
++.+
T Consensus 271 ~~~~ 274 (372)
T 1k8k_C 271 TYDS 274 (372)
T ss_dssp EEET
T ss_pred EccC
Confidence 9987
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-30 Score=193.33 Aligned_cols=200 Identities=20% Similarity=0.295 Sum_probs=159.5
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCccc-------------------------------------
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQK------------------------------------- 44 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~------------------------------------- 44 (213)
++++|...|.+++|+|++++|+++ +.|+.|++|+......
T Consensus 81 ~l~~h~~~V~~~~~s~dg~~l~s~---~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~ 157 (340)
T 4aow_A 81 ALRGHSHFVSDVVISSDGQFALSG---SWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT 157 (340)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEE---ETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECT
T ss_pred EEeCCCCCEEEEEECCCCCEEEEE---cccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEe
Confidence 467899999999999999999999 6888898888743110
Q ss_pred ---ccceeeeeeecCCceEEEEecCC--CEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCC
Q psy7433 45 ---KALVQAFVCHDQGASSLVFAPQH--QLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDG 119 (213)
Q Consensus 45 ---~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~ 119 (213)
........+|...+..++|++++ .++++++.|+.|++||+++++.+..+.+|..+|.+++|+|++++|++++.|+
T Consensus 158 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg 237 (340)
T 4aow_A 158 LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDG 237 (340)
T ss_dssp TSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTC
T ss_pred CCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCC
Confidence 00111123466788899998754 5788999999999999999999999999999999999999999999999999
Q ss_pred cee----------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeC
Q psy7433 120 DIK----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVD 183 (213)
Q Consensus 120 ~i~----------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 183 (213)
.++ ..+.++.|+|++. +++++.|+.|++||++.+..+..+..+.. ......+...|++++|+
T Consensus 238 ~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~~~~h~~~v~~l~~s 315 (340)
T 4aow_A 238 QAMLWDLNEGKHLYTLDGGDIINALCFSPNRY-WLCAATGPSIKIWDLEGKIIVDELKQEVI-STSSKAEPPQCTSLAWS 315 (340)
T ss_dssp EEEEEETTTTEEEEEEECSSCEEEEEECSSSS-EEEEEETTEEEEEETTTTEEEEEECCC--------CCCCCEEEEEEC
T ss_pred eEEEEEeccCceeeeecCCceEEeeecCCCCc-eeeccCCCEEEEEECCCCeEEEeccccce-eeeccCCCCCEEEEEEC
Confidence 886 6789999999876 55566799999999999888877765321 12233445789999999
Q ss_pred CCC-eEEEEecCCcEEEEeCCCCc
Q psy7433 184 GGS-RLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 184 ~~~-~l~s~~~d~~i~iw~~~~~~ 206 (213)
|++ +|++++.||.|+|||+.++.
T Consensus 316 ~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 316 ADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp TTSSEEEEEETTSCEEEEEEEC--
T ss_pred CCCCEEEEEeCCCEEEEEeCCCcC
Confidence 975 69999999999999999875
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-30 Score=201.84 Aligned_cols=187 Identities=25% Similarity=0.406 Sum_probs=163.2
Q ss_pred ccccccCce-EEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEE
Q psy7433 2 TYQCHNKIT-SDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDIC 80 (213)
Q Consensus 2 ~l~~h~~~v-~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 80 (213)
+|++|...| .++.+ ++++|+++ +.|+.|++||+ .+.+.+..+.+|...|.+++|+|++ +|++|+.||.|+
T Consensus 116 ~l~~h~~~v~~~~~~--~~~~l~sg---s~dg~i~vwd~---~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~ 186 (464)
T 3v7d_B 116 TLRGHMTSVITCLQF--EDNYVITG---ADDKMIRVYDS---INKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVR 186 (464)
T ss_dssp EEECCSSSCEEEEEE--ETTEEEEE---ETTSCEEEEET---TTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEE
T ss_pred EEcCCCCCcEEEEEE--CCCEEEEE---cCCCcEEEEEC---CCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEE
Confidence 578898885 55555 56799999 68999999999 5677888889999999999999988 999999999999
Q ss_pred EEeccCceEEEecccCCCCeeEEEec--CCCCEEEEecCCCcee------------------------------------
Q psy7433 81 VIDLRQRVIRSRFNAHESPVKCLAID--PHEEFFVTGAGDGDIK------------------------------------ 122 (213)
Q Consensus 81 iwd~~~~~~~~~~~~~~~~i~~~~~~--~~~~~l~~~~~~~~i~------------------------------------ 122 (213)
+||+++++.+..+.+|...|.+++++ +++..+++++.|+.++
T Consensus 187 vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (464)
T 3v7d_B 187 VWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVL 266 (464)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEE
T ss_pred EEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEc
Confidence 99999999999999999999999998 4667777777776442
Q ss_pred --------------------------------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeee
Q psy7433 123 --------------------------------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLY 158 (213)
Q Consensus 123 --------------------------------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~ 158 (213)
..|.+++|+|+++++++|+.||.|++||+++++++.
T Consensus 267 ~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~ 346 (464)
T 3v7d_B 267 RGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMY 346 (464)
T ss_dssp CCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEE
T ss_pred cCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEE
Confidence 568899999999999999999999999999999999
Q ss_pred eecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCccc
Q psy7433 159 NFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
.+..|. ..|.++.++ +.+|++++.||.|++||+.+....
T Consensus 347 ~~~~h~----------~~v~~~~~~-~~~l~s~s~dg~v~vwd~~~~~~~ 385 (464)
T 3v7d_B 347 TLQGHT----------ALVGLLRLS-DKFLVSAAADGSIRGWDANDYSRK 385 (464)
T ss_dssp EECCCS----------SCEEEEEEC-SSEEEEEETTSEEEEEETTTCCEE
T ss_pred EEeCCC----------CcEEEEEEc-CCEEEEEeCCCcEEEEECCCCcee
Confidence 998876 789999998 468999999999999999876543
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-31 Score=205.55 Aligned_cols=198 Identities=13% Similarity=0.196 Sum_probs=150.2
Q ss_pred ccccccCceEEEEEeC-CCCeEEEeeccCCCccEEEEeCCCcccccceeeee---eecCCceEEEEecCCCEEEEEcCCC
Q psy7433 2 TYQCHNKITSDFVFLG-SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV---CHDQGASSLVFAPQHQLLISAGKKG 77 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~-~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~ 77 (213)
.+.+|.+.|++++|+| ++++|+++ +.|++|++||++ .. ....+. .+...+.+++|+|++++|++|+.||
T Consensus 159 ~~~gH~~~V~~l~f~p~~~~~l~s~---s~D~~v~iwd~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg 231 (435)
T 4e54_B 159 KGIGAGGSITGLKFNPLNTNQFYAS---SMEGTTRLQDFK---GN-ILRVFASSDTINIWFCSLDVSASSRMVVTGDNVG 231 (435)
T ss_dssp CCCSSSCCCCEEEECSSCTTEEEEE---CSSSCEEEEETT---SC-EEEEEECCSSCSCCCCCEEEETTTTEEEEECSSS
T ss_pred EccCCCCCEEEEEEeCCCCCEEEEE---eCCCEEEEeecc---CC-ceeEEeccCCCCccEEEEEECCCCCEEEEEeCCC
Confidence 3568999999999998 68899999 799999999984 22 222222 2344678999999999999999999
Q ss_pred cEEEEeccCceEEEecccCCCCeeEEEecCCCC-EEEEecCCCcee--------------------eceEEEEEccCCce
Q psy7433 78 DICVIDLRQRVIRSRFNAHESPVKCLAIDPHEE-FFVTGAGDGDIK--------------------SPVKCLAIDPHEEF 136 (213)
Q Consensus 78 ~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~~~~i~--------------------~~v~~~~~~~~~~~ 136 (213)
.|++||++. +.+..+..|...|.+++|+|++. ++++++.|+.++ ..|.+++|+|++++
T Consensus 232 ~i~~wd~~~-~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~ 310 (435)
T 4e54_B 232 NVILLNMDG-KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGAR 310 (435)
T ss_dssp BEEEEESSS-CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSE
T ss_pred cEeeeccCc-ceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCe
Confidence 999999864 55667888999999999999876 688899999875 57999999999999
Q ss_pred EEEecCCCcEEEEEccCCeeeeeecCCCC-------------------------------------------------ce
Q psy7433 137 FVTGAGDGDIKVWSLSGNHLLYNFPGEHA-------------------------------------------------RS 167 (213)
Q Consensus 137 l~~~~~dg~i~v~d~~~~~~~~~~~~~~~-------------------------------------------------~~ 167 (213)
|++++.||.|++||+++++....+..|.. ..
T Consensus 311 l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~ 390 (435)
T 4e54_B 311 LLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKM 390 (435)
T ss_dssp EEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCE
T ss_pred eEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcE
Confidence 99999999999999987654333221110 00
Q ss_pred --eEEEecCCCeEEE-EeCCCCeEEEEecCCcEEEEeCCCCcc
Q psy7433 168 --SFFKHIGQGVTQL-HVDGGSRLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 168 --~~~~~~~~~v~~~-~~~~~~~l~s~~~d~~i~iw~~~~~~~ 207 (213)
.....+...|.++ +|+|++.+++++.|+.|+||++.+++.
T Consensus 391 ~~~l~~~~~~~v~s~~~fspdg~~lasg~d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 391 MCQLYDPESSGISSLNEFNPMGDTLASAMGYHILIWSQQEART 433 (435)
T ss_dssp EEEECCSSCCCCCCEEEECTTSSCEEEECSSEEEECCCC----
T ss_pred EEEEeCCCCCcEEEEEEECCCCCEEEEEcCCcEEEEECCcCee
Confidence 0012344566676 689977644445688999999988753
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-31 Score=198.83 Aligned_cols=190 Identities=21% Similarity=0.305 Sum_probs=160.7
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
++.+|...|.+++| ++++|+++ +.|+.|++||++ .....+..+..|...|.+++|+|++++|++++.|+.|++
T Consensus 171 ~~~~~~~~v~~~~~--~~~~l~~~---~~dg~i~i~d~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~i 243 (401)
T 4aez_A 171 TMAGHQARVGCLSW--NRHVLSSG---SRSGAIHHHDVR--IANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQI 243 (401)
T ss_dssp EECCCSSCEEEEEE--ETTEEEEE---ETTSEEEEEETT--SSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred EecCCCCceEEEEE--CCCEEEEE---cCCCCEEEEecc--cCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEE
Confidence 46789999999999 45799998 689999999995 245567778889999999999999999999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCC-EEEEec--CCCcee----------------eceEEEEEccCCceEEE--e
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEE-FFVTGA--GDGDIK----------------SPVKCLAIDPHEEFFVT--G 140 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~--~~~~i~----------------~~v~~~~~~~~~~~l~~--~ 140 (213)
||+++++.+..+..|...+.+++|+|++. .+++++ .|+.++ ..+.+++|+|+++++++ |
T Consensus 244 wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g 323 (401)
T 4aez_A 244 WDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHG 323 (401)
T ss_dssp EETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEEC
T ss_pred ccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEee
Confidence 99999999988988999999999999765 555544 688776 67999999999999998 5
Q ss_pred cCCCcEEEEEccCCeeeee--ecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCccc
Q psy7433 141 AGDGDIKVWSLSGNHLLYN--FPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 141 ~~dg~i~v~d~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
+.||.|++||+++++.... +..|. ..|.+++|+|++ +|++++.||.|++|++.+++.+
T Consensus 324 ~~dg~i~v~~~~~~~~~~~~~~~~h~----------~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~ 384 (401)
T 4aez_A 324 FPDNNLSIWSYSSSGLTKQVDIPAHD----------TRVLYSALSPDGRILSTAASDENLKFWRVYDGDHV 384 (401)
T ss_dssp TTTCEEEEEEEETTEEEEEEEEECCS----------SCCCEEEECTTSSEEEEECTTSEEEEEECCC----
T ss_pred cCCCcEEEEecCCccceeEEEecCCC----------CCEEEEEECCCCCEEEEEeCCCcEEEEECCCCccc
Confidence 5899999999998655443 55554 789999999965 6999999999999999987654
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-31 Score=204.98 Aligned_cols=190 Identities=13% Similarity=0.219 Sum_probs=155.3
Q ss_pred ccccCceEEEEEeC-CCCeEEEeeccCCCccEEEEeCCCccccc---ceeeeeeecCCceEEEEecCCCEEEEEcCCCcE
Q psy7433 4 QCHNKITSDFVFLG-SCSLVATAGHSSESKNVCLWDSLLPQKKA---LVQAFVCHDQGASSLVFAPQHQLLISAGKKGDI 79 (213)
Q Consensus 4 ~~h~~~v~~~~~~~-~~~~l~~~g~~s~~~~i~iwd~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v 79 (213)
++|.+.|++++|+| ++++|+++ +.|+.|++||+....... ....+ .|...|.+++|+|++++|++++.||.|
T Consensus 60 ~~h~~~V~~~~~s~~~~~~l~s~---s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i 135 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETPYLITG---SDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSKDGQI 135 (437)
T ss_dssp TTTTSCEEEEEEECSSSCEEEEE---ETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred cCCCCceEEEEECCCCCCEEEEe---cCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEeCCCEE
Confidence 78999999999999 99999999 689999999984311122 22222 589999999999999999999999999
Q ss_pred EEEecc---CceEEEecc----------c--CCCCeeEEE--ecCCCCEEEEecCCCcee-------------------e
Q psy7433 80 CVIDLR---QRVIRSRFN----------A--HESPVKCLA--IDPHEEFFVTGAGDGDIK-------------------S 123 (213)
Q Consensus 80 ~iwd~~---~~~~~~~~~----------~--~~~~i~~~~--~~~~~~~l~~~~~~~~i~-------------------~ 123 (213)
++||++ +++....+. . +...+.++. ++|++..+++++.|+.++ .
T Consensus 136 ~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~ 215 (437)
T 3gre_A 136 IVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHG 215 (437)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGC
T ss_pred EEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCC
Confidence 999995 443332221 1 455666776 567899999999999886 5
Q ss_pred ceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeec-CCCCceeEEEecCCCeEEEEeCC----CC-eEEEEecCCcE
Q psy7433 124 PVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFP-GEHARSSFFKHIGQGVTQLHVDG----GS-RLFSCGADGSM 197 (213)
Q Consensus 124 ~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~----~~-~l~s~~~d~~i 197 (213)
.|.+++|+|++++|++|+.||.|++||+++++++..+. .+. ..|.+++|+| ++ +|++++.||.|
T Consensus 216 ~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~----------~~v~~~~~~~~~s~~~~~l~s~~~dg~i 285 (437)
T 3gre_A 216 AVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDH----------APITHVEVCQFYGKNSVIVVGGSSKTFL 285 (437)
T ss_dssp CEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTC----------EEEEEEEECTTTCTTEEEEEEESTTEEE
T ss_pred ceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCC----------CceEEEEeccccCCCccEEEEEcCCCcE
Confidence 79999999999999999999999999999999988876 443 5799997765 44 68999999999
Q ss_pred EEEeCCCCcc
Q psy7433 198 KVRQLPDRDA 207 (213)
Q Consensus 198 ~iw~~~~~~~ 207 (213)
++||+.+++.
T Consensus 286 ~iwd~~~~~~ 295 (437)
T 3gre_A 286 TIWNFVKGHC 295 (437)
T ss_dssp EEEETTTTEE
T ss_pred EEEEcCCCcE
Confidence 9999987753
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-31 Score=198.57 Aligned_cols=197 Identities=16% Similarity=0.206 Sum_probs=159.3
Q ss_pred ccccCceEEEEEeCC----CCeEEEeeccCCCccEEEEeCCCcccccceeeeee-----ecCCceEEEEecC----CCEE
Q psy7433 4 QCHNKITSDFVFLGS----CSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVC-----HDQGASSLVFAPQ----HQLL 70 (213)
Q Consensus 4 ~~h~~~v~~~~~~~~----~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~----~~~l 70 (213)
++|.++|++++|+|+ ...++++ ..++.|++||+ .....+..+.. |...|.+++|+|+ +++|
T Consensus 15 ~~h~~~v~~i~~~p~~~~~~~~~~~~---~~~~~v~vw~~---~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l 88 (366)
T 3k26_A 15 EDHNQPLFGVQFNWHSKEGDPLVFAT---VGSNRVTLYEC---HSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLL 88 (366)
T ss_dssp CTTCSCEEEEEECTTCCTTSCEEEEE---EETTEEEEEEE---CGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEE
T ss_pred cCCCCceEEEEEecccCCCCceEEEE---CCCCEEEEEEc---CCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEE
Confidence 479999999999984 3344444 35779999998 44555555554 4467999999998 6799
Q ss_pred EEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecC-CCCEEEEecCCCcee--------------------eceEEEE
Q psy7433 71 ISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDP-HEEFFVTGAGDGDIK--------------------SPVKCLA 129 (213)
Q Consensus 71 ~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~i~--------------------~~v~~~~ 129 (213)
++++.||.|++||+.+++.+..+..|...|.+++|+| ++..|++++.|+.++ ..|.+++
T Consensus 89 ~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~ 168 (366)
T 3k26_A 89 AVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSAD 168 (366)
T ss_dssp EEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEE
T ss_pred EEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEE
Confidence 9999999999999999999999999999999999999 899999999999886 5789999
Q ss_pred EccCCceEEEecCCCcEEEEEccCCeeeeeecC------------------CCCceeEEEecCCCeEEEEeCCCCeEEEE
Q psy7433 130 IDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPG------------------EHARSSFFKHIGQGVTQLHVDGGSRLFSC 191 (213)
Q Consensus 130 ~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~------------------~~~~~~~~~~~~~~v~~~~~~~~~~l~s~ 191 (213)
|+|++++|++++.||.|++||+++++....+.. ..........+...|.+++|+ +++++++
T Consensus 169 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~ 247 (366)
T 3k26_A 169 YDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL-GDLILSK 247 (366)
T ss_dssp ECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE-TTEEEEE
T ss_pred ECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc-CCEEEEE
Confidence 999999999999999999999987765443332 000000111134789999999 6689999
Q ss_pred ecCCcEEEEeCCCCcc
Q psy7433 192 GADGSMKVRQLPDRDA 207 (213)
Q Consensus 192 ~~d~~i~iw~~~~~~~ 207 (213)
+.|+.|++||+.+...
T Consensus 248 ~~d~~i~~wd~~~~~~ 263 (366)
T 3k26_A 248 SCENAIVCWKPGKMED 263 (366)
T ss_dssp CSSSEEEEEEESSTTC
T ss_pred ecCCEEEEEeCCCccc
Confidence 9999999999987654
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-30 Score=194.94 Aligned_cols=200 Identities=17% Similarity=0.209 Sum_probs=154.3
Q ss_pred ccccccCceEEEEE------eCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecC----CceEEE----EecCC
Q psy7433 2 TYQCHNKITSDFVF------LGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQ----GASSLV----FAPQH 67 (213)
Q Consensus 2 ~l~~h~~~v~~~~~------~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~----~v~~~~----~~~~~ 67 (213)
++.+|...|.+++| +|++++|+++ +.|+.|++||++.. ...+..+..|.. .+.+++ |+|++
T Consensus 106 ~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~---~~d~~i~vwd~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 180 (357)
T 3i2n_A 106 SVKGHKEIINAIDGIGGLGIGEGAPEIVTG---SRDGTVKVWDPRQK--DDPVANMEPVQGENKRDCWTVAFGNAYNQEE 180 (357)
T ss_dssp EECCCSSCEEEEEEESGGGCC-CCCEEEEE---ETTSCEEEECTTSC--SSCSEEECCCTTSCCCCEEEEEEECCCC-CC
T ss_pred EEEecccceEEEeeccccccCCCccEEEEE---eCCCeEEEEeCCCC--CCcceeccccCCCCCCceEEEEEEeccCCCC
Confidence 46789999999965 6789999999 68999999999532 225556655544 788888 67899
Q ss_pred CEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecC---CCCEEEEecCCCcee----------------------
Q psy7433 68 QLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDP---HEEFFVTGAGDGDIK---------------------- 122 (213)
Q Consensus 68 ~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~---~~~~l~~~~~~~~i~---------------------- 122 (213)
++|++++.|+.|++||+++++.... ..+...+.+++|+| ++..+++++.++.++
T Consensus 181 ~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 259 (357)
T 3i2n_A 181 RVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHK 259 (357)
T ss_dssp CEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCS
T ss_pred CEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCc
Confidence 9999999999999999999887554 45788999999999 899999999999886
Q ss_pred eceEEEEEccCCc-eEEEecCCCcEEEEEccCCeeeeeecCCC---------CceeEEEecCCCeEEEEeCCCC-eEE-E
Q psy7433 123 SPVKCLAIDPHEE-FFVTGAGDGDIKVWSLSGNHLLYNFPGEH---------ARSSFFKHIGQGVTQLHVDGGS-RLF-S 190 (213)
Q Consensus 123 ~~v~~~~~~~~~~-~l~~~~~dg~i~v~d~~~~~~~~~~~~~~---------~~~~~~~~~~~~v~~~~~~~~~-~l~-s 190 (213)
..|.+++|+|+++ ++++++.||.|++||++.+.......... ........+...|.+++|+|++ .|+ +
T Consensus 260 ~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s 339 (357)
T 3i2n_A 260 STVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVC 339 (357)
T ss_dssp SCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEE
T ss_pred CCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEE
Confidence 5689999999998 89999999999999998643221111100 0111123334789999999965 476 8
Q ss_pred EecCCcEEEEeCCCCcc
Q psy7433 191 CGADGSMKVRQLPDRDA 207 (213)
Q Consensus 191 ~~~d~~i~iw~~~~~~~ 207 (213)
++.|+.|++||+.+...
T Consensus 340 ~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 340 SSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp EETTSEEEEEEECC---
T ss_pred ecCCCcEEEEECCCccc
Confidence 99999999999987643
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-31 Score=216.45 Aligned_cols=196 Identities=14% Similarity=0.147 Sum_probs=162.9
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEE
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVI 82 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iw 82 (213)
..+|.+.|++++|+|++++||++ +.|+.|+||+.. ..+....+ .|...|.+++|+| +++|++++.|+.|++|
T Consensus 13 ~~gh~~~V~~lafspdg~~lAsg---s~Dg~I~lw~~~---~~~~~~~~-~~~~~V~~l~fsp-g~~L~S~s~D~~v~lW 84 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFTQNLLAIA---TVTGEVHIYGQQ---QVEVVIKL-EDRSAIKEMRFVK-GIYLVVINAKDTVYVL 84 (902)
T ss_dssp EEECSSCEEEEEEETTTTEEEEE---ETTSEEEEECST---TCEEEEEC-SSCCCEEEEEEET-TTEEEEEETTCEEEEE
T ss_pred ccCCCCCcEEEEECCCCCEEEEE---eCCCEEEEEeCC---CcEEEEEc-CCCCCEEEEEEcC-CCEEEEEECcCeEEEE
Confidence 35899999999999999999999 689999999973 33333333 3678899999999 8899999999999999
Q ss_pred eccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee----------------------------eceEEEEEccC-
Q psy7433 83 DLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----------------------------SPVKCLAIDPH- 133 (213)
Q Consensus 83 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------------------~~v~~~~~~~~- 133 (213)
|+++++.+..+. +...|++++|+|+++++++|+.|+.++ ..|.+++|+|+
T Consensus 85 d~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~ 163 (902)
T 2oaj_A 85 SLYSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRD 163 (902)
T ss_dssp ETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTE
T ss_pred ECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCC
Confidence 999998888876 678899999999999999999999876 15789999996
Q ss_pred CceEEEecCCCcEEEEEccCCeeeeeecCCCCce--------eEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCC
Q psy7433 134 EEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARS--------SFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 134 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~--------~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~ 204 (213)
+..+++|+.||.| +||+++++.+..+..+.... .....+...|.+++|+|++ +|++++.||.|++||+.+
T Consensus 164 ~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~ 242 (902)
T 2oaj_A 164 IGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANS 242 (902)
T ss_dssp EEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTT
T ss_pred CCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCC
Confidence 4689999999999 99999999888887651100 0001223679999999975 599999999999999988
Q ss_pred Cccc
Q psy7433 205 RDAV 208 (213)
Q Consensus 205 ~~~~ 208 (213)
++.+
T Consensus 243 g~~~ 246 (902)
T 2oaj_A 243 GHMI 246 (902)
T ss_dssp CCEE
T ss_pred CcEE
Confidence 7543
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-31 Score=199.76 Aligned_cols=185 Identities=17% Similarity=0.302 Sum_probs=163.1
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEec
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDL 84 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~ 84 (213)
+|.+.|.+++|+|++++|+++ +.|+.|++||. ....+..+..|...|.+++|+|++++|++++.|+.|++||+
T Consensus 106 ~~~~~v~~~~~s~~~~~l~~~---~~dg~i~i~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 178 (425)
T 1r5m_A 106 KTTNQVTCLAWSHDGNSIVTG---VENGELRLWNK----TGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNV 178 (425)
T ss_dssp --CBCEEEEEECTTSSEEEEE---ETTSCEEEEET----TSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEET
T ss_pred CCCCceEEEEEcCCCCEEEEE---eCCCeEEEEeC----CCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEEC
Confidence 478899999999999999999 68999999994 56677788889999999999999999999999999999999
Q ss_pred cCceEEEecccCCCC---------------eeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEcc
Q psy7433 85 RQRVIRSRFNAHESP---------------VKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDP 132 (213)
Q Consensus 85 ~~~~~~~~~~~~~~~---------------i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~ 132 (213)
++++.+..+..+... +.+++|+|++ .+++++.++.+. ..+.+++|+|
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~ 257 (425)
T 1r5m_A 179 ISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFND 257 (425)
T ss_dssp TTTEEEEEECCC---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEET
T ss_pred CCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECC
Confidence 999988888777666 9999999975 578888888775 6789999999
Q ss_pred CCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCcc
Q psy7433 133 HEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 133 ~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~ 207 (213)
++++|++++.|+.|++||+++++....+..|. ..|.+++|+|++.+++++.|+.|++||+.+++.
T Consensus 258 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~----------~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 322 (425)
T 1r5m_A 258 TNKLLLSASDDGTLRIWHGGNGNSQNCFYGHS----------QSIVSASWVGDDKVISCSMDGSVRLWSLKQNTL 322 (425)
T ss_dssp TTTEEEEEETTSCEEEECSSSBSCSEEECCCS----------SCEEEEEEETTTEEEEEETTSEEEEEETTTTEE
T ss_pred CCCEEEEEcCCCEEEEEECCCCccceEecCCC----------ccEEEEEECCCCEEEEEeCCCcEEEEECCCCcE
Confidence 99999999999999999999988888887765 789999999988999999999999999987754
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-30 Score=187.81 Aligned_cols=185 Identities=19% Similarity=0.305 Sum_probs=159.8
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEE
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVI 82 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iw 82 (213)
+.+|...|++++|+|++++|+++ +.|+.|++||+ .+++.+..+.+|...+.++. +++..+++++.++.+++|
T Consensus 63 ~~~~~~~V~~v~~~~~~~~l~sg---s~Dg~v~iw~~---~~~~~~~~~~~h~~~~~~~~--~~~~~l~s~~~~~~~~~~ 134 (318)
T 4ggc_A 63 MEQPGEYISSVAWIKEGNYLAVG---TSSAEVQLWDV---QQQKRLRNMTSHSARVGSLS--WNSYILSSGSRSGHIHHH 134 (318)
T ss_dssp CCSTTCCEEEEEECTTSSEEEEE---ETTSEEEEEET---TTTEEEEEEECCSSCEEEEE--EETTEEEEEETTSEEEEE
T ss_pred ecCCCCeEEEEEECCCCCEEEEE---ECCCcEEEeec---CCceeEEEecCccceEEEee--cCCCEEEEEecCCceEee
Confidence 45788899999999999999999 68999999999 56778888888888776554 567799999999999999
Q ss_pred eccCc-eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee---------------------------------------
Q psy7433 83 DLRQR-VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK--------------------------------------- 122 (213)
Q Consensus 83 d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~--------------------------------------- 122 (213)
+.... ..+..+.+|...+..+.+.++++.+++++.|+.++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 214 (318)
T 4ggc_A 135 DVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLAT 214 (318)
T ss_dssp ETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEE
T ss_pred ecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEE
Confidence 99875 55667778999999999999999999999999775
Q ss_pred --------------------------eceEEEEEccCCceEEEe--cCCCcEEEEEccCCeeeeeecCCCCceeEEEecC
Q psy7433 123 --------------------------SPVKCLAIDPHEEFFVTG--AGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIG 174 (213)
Q Consensus 123 --------------------------~~v~~~~~~~~~~~l~~~--~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~ 174 (213)
..+..+.|+|+++.++++ +.|+.|++||+++++++..+.+|.
T Consensus 215 ~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~---------- 284 (318)
T 4ggc_A 215 GGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHT---------- 284 (318)
T ss_dssp EECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCS----------
T ss_pred EecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCC----------
Confidence 456778888888866654 478999999999999999999886
Q ss_pred CCeEEEEeCCCC-eEEEEecCCcEEEEeCCCC
Q psy7433 175 QGVTQLHVDGGS-RLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 175 ~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~ 205 (213)
+.|++++|+|++ +|+|++.||.|+|||+.+.
T Consensus 285 ~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 285 SRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp SCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred CCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 789999999965 6999999999999999765
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-30 Score=192.96 Aligned_cols=189 Identities=17% Similarity=0.296 Sum_probs=163.3
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeee------------------------------
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAF------------------------------ 51 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~------------------------------ 51 (213)
++++|...|.+++|+|++++|+++ +.|+.|++||++.. +.+..+
T Consensus 69 ~~~~h~~~v~~~~~~~~~~~l~s~---~~dg~i~iwd~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g 142 (369)
T 3zwl_B 69 TLDGHTGTIWSIDVDCFTKYCVTG---SADYSIKLWDVSNG---QCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPG 142 (369)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEE---ETTTEEEEEETTTC---CEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCC
T ss_pred hhhhcCCcEEEEEEcCCCCEEEEE---eCCCeEEEEECCCC---cEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCC
Confidence 467899999999999999999999 68999999998532 111111
Q ss_pred ---------------------------eeecC--CceEEEEecCCCEEEEEcCCCcEEEEeccC-ceEEEecccCCCCee
Q psy7433 52 ---------------------------VCHDQ--GASSLVFAPQHQLLISAGKKGDICVIDLRQ-RVIRSRFNAHESPVK 101 (213)
Q Consensus 52 ---------------------------~~~~~--~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~-~~~~~~~~~~~~~i~ 101 (213)
..|.. .+.+++|+|++++|++++.||.|++||+++ .+.+..+..|...+.
T Consensus 143 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~ 222 (369)
T 3zwl_B 143 SINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSIS 222 (369)
T ss_dssp EEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEE
T ss_pred EEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCcee
Confidence 11112 788888999999999999999999999998 788888888999999
Q ss_pred EEEecCCCCEEEEecCCCcee----------------eceEEEEEccCCceEEEecCCC--------------cEEEEEc
Q psy7433 102 CLAIDPHEEFFVTGAGDGDIK----------------SPVKCLAIDPHEEFFVTGAGDG--------------DIKVWSL 151 (213)
Q Consensus 102 ~~~~~~~~~~l~~~~~~~~i~----------------~~v~~~~~~~~~~~l~~~~~dg--------------~i~v~d~ 151 (213)
+++|+|++++|++++.|+.++ ..+.+++|+|+++++++++.++ .+++||+
T Consensus 223 ~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~ 302 (369)
T 3zwl_B 223 DMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHK 302 (369)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEET
T ss_pred EEEECCCCCEEEEecCCceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEec
Confidence 999999999999999999886 6789999999999999999888 8999999
Q ss_pred cCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCc
Q psy7433 152 SGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~ 206 (213)
++++.+..+..|. ..|.+++|+|++ +|++++.||.|++|++.++.
T Consensus 303 ~~~~~~~~~~~~~----------~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~ 348 (369)
T 3zwl_B 303 IFEEEIGRVQGHF----------GPLNTVAISPQGTSYASGGEDGFIRLHHFEKSY 348 (369)
T ss_dssp TTCCEEEEEECCS----------SCEEEEEECTTSSEEEEEETTSEEEEEEECHHH
T ss_pred CCCcchhheeccc----------CcEEEEEECCCCCEEEEEcCCCeEEEEECcccc
Confidence 9999999998876 789999999965 69999999999999998653
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=99.98 E-value=2.5e-30 Score=191.96 Aligned_cols=200 Identities=15% Similarity=0.185 Sum_probs=148.7
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCC-EEEEEcCCCcEEE
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQ-LLISAGKKGDICV 81 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~i 81 (213)
.++|.+.|++++|+|++++|+++ +.|+.|++|++...........+..|...|.+++|+|+++ +|++++.||.|++
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~---~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~ 83 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLIT---SWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILK 83 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEE---ETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEE
T ss_pred ccCCCCcEEEEEEcCCCCEEEEE---cCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEE
Confidence 46899999999999999999999 6899999999853332234556668999999999999999 9999999999999
Q ss_pred Eec-cCceEEEeccc--CCCCeeEEEecCCCCEEEEecCCCcee------------------------------------
Q psy7433 82 IDL-RQRVIRSRFNA--HESPVKCLAIDPHEEFFVTGAGDGDIK------------------------------------ 122 (213)
Q Consensus 82 wd~-~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------------------------ 122 (213)
||+ .+++. ..+.. |...|.+++|+| +..+++++.|+.++
T Consensus 84 wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 161 (342)
T 1yfq_A 84 VDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSS 161 (342)
T ss_dssp ECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSS
T ss_pred EEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCC
Confidence 999 77754 66777 999999999999 99999999987653
Q ss_pred --------------------------------eceEEEEEcc-CCceEEEecCCCcEEEEEccCC------eeeeeecCC
Q psy7433 123 --------------------------------SPVKCLAIDP-HEEFFVTGAGDGDIKVWSLSGN------HLLYNFPGE 163 (213)
Q Consensus 123 --------------------------------~~v~~~~~~~-~~~~l~~~~~dg~i~v~d~~~~------~~~~~~~~~ 163 (213)
..+.+++|+| +++++++++.||.|++||++.. +....+..|
T Consensus 162 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~ 241 (342)
T 1yfq_A 162 RLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCH 241 (342)
T ss_dssp EEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECC
T ss_pred cEEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecc
Confidence 1344455555 5555555555555555555443 333334333
Q ss_pred CCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCccc
Q psy7433 164 HARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 164 ~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
..... ...+...|.+++|+|++ +|++++.||.|++||+.+++.+
T Consensus 242 ~~~~~-~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~ 286 (342)
T 1yfq_A 242 RLNLK-DTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKI 286 (342)
T ss_dssp CCCTT-CCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEE
T ss_pred ccccc-ccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHh
Confidence 21000 00012389999999965 6999999999999999987543
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.6e-31 Score=204.86 Aligned_cols=201 Identities=15% Similarity=0.253 Sum_probs=162.9
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeee------------ecCCceEEE--EecCCCEE
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVC------------HDQGASSLV--FAPQHQLL 70 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~------------~~~~v~~~~--~~~~~~~l 70 (213)
+|.+.|.+++|+|++++|+++ +.|+.|++||++.....+....+.. +...+.++. +++++++|
T Consensus 109 ~h~~~v~~~~~~~~~~~l~s~---s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l 185 (437)
T 3gre_A 109 DCSSTVTQITMIPNFDAFAVS---SKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLL 185 (437)
T ss_dssp ECSSCEEEEEECTTSSEEEEE---ETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEE
T ss_pred cCCCCEEEEEEeCCCCEEEEE---eCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEE
Confidence 589999999999999999999 6899999999842223333333322 334566666 45789999
Q ss_pred EEEcCCCcEEEEeccCceEEEeccc--CCCCeeEEEecCCCCEEEEecCCCcee------------------eceEEEEE
Q psy7433 71 ISAGKKGDICVIDLRQRVIRSRFNA--HESPVKCLAIDPHEEFFVTGAGDGDIK------------------SPVKCLAI 130 (213)
Q Consensus 71 ~~~~~d~~v~iwd~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------~~v~~~~~ 130 (213)
++++.|+.|++||+++++.+..+.. |...|.+++|+|++++|++++.|+.++ ..|.+++|
T Consensus 186 ~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~ 265 (437)
T 3gre_A 186 VALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEV 265 (437)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEE
T ss_pred EEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEe
Confidence 9999999999999999999988887 789999999999999999999999886 57889966
Q ss_pred c----cCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeE--------------EE--ecCCCeEEEEeCCCCeEEE
Q psy7433 131 D----PHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSF--------------FK--HIGQGVTQLHVDGGSRLFS 190 (213)
Q Consensus 131 ~----~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~--------------~~--~~~~~v~~~~~~~~~~l~s 190 (213)
+ |++++|++++.||.|++||+++++.+..+..+...... +. .+...|.+++|+++.+|++
T Consensus 266 ~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s 345 (437)
T 3gre_A 266 CQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLT 345 (437)
T ss_dssp CTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEEEE
T ss_pred ccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEECCceEEEe
Confidence 5 46779999999999999999999998888866422110 11 1456799999996667999
Q ss_pred EecCCcEEEEeCCCCccc
Q psy7433 191 CGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 191 ~~~d~~i~iw~~~~~~~~ 208 (213)
++.|+.|++||+.+++..
T Consensus 346 ~~~d~~i~~wd~~~~~~~ 363 (437)
T 3gre_A 346 DEATSSIVMFSLNELSSS 363 (437)
T ss_dssp EGGGTEEEEEETTCGGGC
T ss_pred cCCCCeEEEEECCCcccc
Confidence 999999999999987543
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.98 E-value=2.9e-30 Score=189.22 Aligned_cols=187 Identities=24% Similarity=0.339 Sum_probs=162.9
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
+|++|.+.|++++| |++++|+++ +.|+.|++||+ ........+..|...|.+++|+|++++|++++.|+.+++
T Consensus 13 ~l~~h~~~v~~~~~-~~~~~l~s~---~~dg~v~vw~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~ 85 (313)
T 3odt_A 13 TLKGHDQDVRDVVA-VDDSKVASV---SRDGTVRLWSK---DDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMING 85 (313)
T ss_dssp EECCCSSCEEEEEE-EETTEEEEE---ETTSEEEEEEE---SSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred HhhCCCCCcEEEEe-cCCCEEEEE---EcCCcEEEEEC---CCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEE
Confidence 57899999999999 999999999 68999999998 566677778889999999999999999999999999999
Q ss_pred EeccCc---eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee---------------eceEEEEEcc-CCceEEEecC
Q psy7433 82 IDLRQR---VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK---------------SPVKCLAIDP-HEEFFVTGAG 142 (213)
Q Consensus 82 wd~~~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~---------------~~v~~~~~~~-~~~~l~~~~~ 142 (213)
|++... +....+..|...+.+++| +++.+++++.|+.++ ..+.++.|+| +++++++++.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 163 (313)
T 3odt_A 86 VPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWKEGSLVYNLQAHNASVWDAKVVSFSENKFLTASA 163 (313)
T ss_dssp EETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTEEEEEEECCSSCEEEEEEEETTTTEEEEEET
T ss_pred EEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEcCCcEEEecccCCCceeEEEEccCCCCEEEEEEC
Confidence 998754 566777889999999999 577999999999886 7789999988 8999999999
Q ss_pred CCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCccc
Q psy7433 143 DGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 143 dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
||.|++|| ..+....+...+ ...+.+++|+|++.+++++.||.|++||+.+++.+
T Consensus 164 d~~i~i~d--~~~~~~~~~~~~---------~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~ 218 (313)
T 3odt_A 164 DKTIKLWQ--NDKVIKTFSGIH---------NDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVL 218 (313)
T ss_dssp TSCEEEEE--TTEEEEEECSSC---------SSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEE
T ss_pred CCCEEEEe--cCceEEEEeccC---------cccEEEEEEcCCCeEEEccCCCeEEEEECCchhhh
Confidence 99999999 445555665522 27899999999888999999999999999987543
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.98 E-value=2e-30 Score=197.33 Aligned_cols=190 Identities=14% Similarity=0.207 Sum_probs=163.8
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCccc-------------------------------------
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQK------------------------------------- 44 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~------------------------------------- 44 (213)
.+.+|...|.+++|+|++++|+++ +.|+.|++||++....
T Consensus 144 ~~~~~~~~v~~~~~~~~~~~l~~~---~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (425)
T 1r5m_A 144 VLNFHRAPIVSVKWNKDGTHIISM---DVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKF 220 (425)
T ss_dssp EECCCCSCEEEEEECTTSSEEEEE---ETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEE
T ss_pred eccCCCccEEEEEECCCCCEEEEE---ecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEE
Confidence 467899999999999999999999 6899999999853211
Q ss_pred ----------------ccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCC
Q psy7433 45 ----------------KALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPH 108 (213)
Q Consensus 45 ----------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~ 108 (213)
.+.+..+..|...+.+++|+|++++|++++.|+.|++||+++++.+..+..|...+.+++|+|+
T Consensus 221 ~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~ 300 (425)
T 1r5m_A 221 VIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGD 300 (425)
T ss_dssp EEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETT
T ss_pred EEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCC
Confidence 0122344567888999999999999999999999999999999888888889999999999999
Q ss_pred CCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCCCcEEEEEccCCe----------------
Q psy7433 109 EEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNH---------------- 155 (213)
Q Consensus 109 ~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~---------------- 155 (213)
+ .+++++.++.++ ..+.+++|+|++++|++++.||.|++||+++++
T Consensus 301 ~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~ 379 (425)
T 1r5m_A 301 D-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNP 379 (425)
T ss_dssp T-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------C
T ss_pred C-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCc
Confidence 9 999999999886 689999999999999999999999999998777
Q ss_pred ----eeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCC
Q psy7433 156 ----LLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLP 203 (213)
Q Consensus 156 ----~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~ 203 (213)
.+..+..+.. +..|.+++|+|++ +|++++.||.|++|+++
T Consensus 380 ~~~~~~~~~~~~~~--------~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 380 LPIPLYASYQSSQD--------NDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp EECCEEEEECCTTC--------CCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred ccchhhhhhcCccc--------CCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 6666666541 0189999999965 68899999999999986
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.5e-30 Score=196.27 Aligned_cols=195 Identities=14% Similarity=0.115 Sum_probs=161.1
Q ss_pred ccccCceEEEEEeC-CCCeEEEeeccCCCccEEEEeCCCcccccceeeeee---ecCCceEEEEecCCCEEEEEcCCCcE
Q psy7433 4 QCHNKITSDFVFLG-SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVC---HDQGASSLVFAPQHQLLISAGKKGDI 79 (213)
Q Consensus 4 ~~h~~~v~~~~~~~-~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~~v 79 (213)
.+|...|.+++|+| ++++|+++ +.|+.|++||++ ...+..+.. +...|.+++|+|++++|++++.|+.|
T Consensus 115 ~~h~~~v~~~~~~~~~~~~l~s~---~~d~~i~iwd~~----~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 187 (383)
T 3ei3_B 115 MGPGDAITGMKFNQFNTNQLFVS---SIRGATTLRDFS----GSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRL 187 (383)
T ss_dssp CSTTCBEEEEEEETTEEEEEEEE---ETTTEEEEEETT----SCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEE
T ss_pred CCcCCceeEEEeCCCCCCEEEEE---eCCCEEEEEECC----CCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCE
Confidence 47999999999999 78999999 689999999984 234444443 34789999999999999999999999
Q ss_pred EEEeccCceEEEecccCCCCeeEEEecCCCC-EEEEecCCCcee--------------------eceEEEEEcc-CCceE
Q psy7433 80 CVIDLRQRVIRSRFNAHESPVKCLAIDPHEE-FFVTGAGDGDIK--------------------SPVKCLAIDP-HEEFF 137 (213)
Q Consensus 80 ~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~~~~i~--------------------~~v~~~~~~~-~~~~l 137 (213)
++||+ +++.+..+..|...|.+++|+|+++ .+++++.|+.++ ..|.+++|+| ++++|
T Consensus 188 ~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l 266 (383)
T 3ei3_B 188 LLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKL 266 (383)
T ss_dssp EEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEE
T ss_pred EEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEE
Confidence 99999 5777888888999999999999998 999999999876 6789999999 99999
Q ss_pred EEecCCCcEEEEEccCCeeeeeecCCCCc-------eeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCcc
Q psy7433 138 VTGAGDGDIKVWSLSGNHLLYNFPGEHAR-------SSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 138 ~~~~~dg~i~v~d~~~~~~~~~~~~~~~~-------~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~ 207 (213)
++++.|+.|++||+++++....+..+... ..........+..++++|++.+ +++.|+.|++||+.+++.
T Consensus 267 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~-s~s~d~~i~iwd~~~~~~ 342 (383)
T 3ei3_B 267 LTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL-LLNDKRTIDIYDANSGGL 342 (383)
T ss_dssp EEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT-CTTCCCCEEEEETTTCCE
T ss_pred EEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc-ccCCCCeEEEEecCCCce
Confidence 99999999999999988776666543211 1111112245667888887777 889999999999988754
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=99.98 E-value=2.7e-30 Score=198.04 Aligned_cols=191 Identities=21% Similarity=0.399 Sum_probs=161.1
Q ss_pred ccccccCceEEEEEeCCCC-eEEEeeccCCCccEEEEeCCCcccc----cceeeeeeecCCceEEEEec-CCCEEEEEcC
Q psy7433 2 TYQCHNKITSDFVFLGSCS-LVATAGHSSESKNVCLWDSLLPQKK----ALVQAFVCHDQGASSLVFAP-QHQLLISAGK 75 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~-~l~~~g~~s~~~~i~iwd~~~~~~~----~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~ 75 (213)
++.+|...|.+++|+|++. +|+++ +.||.|++|+++..... .....+..|...|.+++|+| ++.+|++++.
T Consensus 176 ~~~~h~~~v~~l~~~~~~~~~l~s~---~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~ 252 (430)
T 2xyi_A 176 RLRGHQKEGYGLSWNPNLNGYLLSA---SDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVAD 252 (430)
T ss_dssp EEECCSSCCCCEEECTTSTTEEEEE---CTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEET
T ss_pred EecCCCCCeEEEEeCCCCCCeEEEE---eCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeC
Confidence 4678999999999999988 89998 78999999999642211 12455668999999999999 6789999999
Q ss_pred CCcEEEEeccCc---eEEEecccCCCCeeEEEecCCCC-EEEEecCCCcee------------------eceEEEEEccC
Q psy7433 76 KGDICVIDLRQR---VIRSRFNAHESPVKCLAIDPHEE-FFVTGAGDGDIK------------------SPVKCLAIDPH 133 (213)
Q Consensus 76 d~~v~iwd~~~~---~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~~~~i~------------------~~v~~~~~~~~ 133 (213)
|+.|++||++++ +.+..+..|...+.+++|+|++. .+++++.|+.++ ..|.+++|+|+
T Consensus 253 dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~ 332 (430)
T 2xyi_A 253 DQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPH 332 (430)
T ss_dssp TSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSS
T ss_pred CCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCC
Confidence 999999999987 56677778999999999999887 688999999886 68999999999
Q ss_pred Cc-eEEEecCCCcEEEEEccC--------------CeeeeeecCCCCceeEEEecCCCeEEEEeCCCC--eEEEEecCCc
Q psy7433 134 EE-FFVTGAGDGDIKVWSLSG--------------NHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS--RLFSCGADGS 196 (213)
Q Consensus 134 ~~-~l~~~~~dg~i~v~d~~~--------------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~~d~~ 196 (213)
++ +|++++.|+.|++||++. .+.+..+.+|. ..|.+++|+|++ .|++++.||.
T Consensus 333 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~----------~~v~~~~~~p~~~~~l~s~s~dg~ 402 (430)
T 2xyi_A 333 NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT----------AKISDFSWNPNEPWIICSVSEDNI 402 (430)
T ss_dssp CTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCS----------SCEEEEEECSSSTTEEEEEETTSE
T ss_pred CCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCC----------CCceEEEECCCCCCEEEEEECCCC
Confidence 86 699999999999999976 24445555554 789999999964 5899999999
Q ss_pred EEEEeCCCC
Q psy7433 197 MKVRQLPDR 205 (213)
Q Consensus 197 i~iw~~~~~ 205 (213)
|++|++.+.
T Consensus 403 i~iw~~~~~ 411 (430)
T 2xyi_A 403 MQVWQMAEN 411 (430)
T ss_dssp EEEEEECHH
T ss_pred EEEeEcccc
Confidence 999998753
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=99.98 E-value=1.6e-30 Score=199.30 Aligned_cols=189 Identities=23% Similarity=0.366 Sum_probs=161.6
Q ss_pred cccccCceEEEEEeCC-CCeEEEeeccCCCccEEEEeCCCc-------ccccceeeeeeecCCceEEEEecCCC-EEEEE
Q psy7433 3 YQCHNKITSDFVFLGS-CSLVATAGHSSESKNVCLWDSLLP-------QKKALVQAFVCHDQGASSLVFAPQHQ-LLISA 73 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~-~~~l~~~g~~s~~~~i~iwd~~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~ 73 (213)
+.+|.+.|++++|+|+ +.+||++ +.+|.|++||+... .....+..+.+|...+.+++|+|++. +|+++
T Consensus 124 ~~~h~~~v~~l~~~p~~~~~lat~---~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~ 200 (430)
T 2xyi_A 124 KINHEGEVNRARYMPQNACVIATK---TPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSA 200 (430)
T ss_dssp EEEESSCCSEEEEETTEEEEEEEE---CSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEE
T ss_pred EEcCCCcEEEEEECCCCCcEEEEE---CCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEE
Confidence 3578999999999997 6788888 78999999998421 11567778889999999999999888 99999
Q ss_pred cCCCcEEEEeccCce-------EEEecccCCCCeeEEEecC-CCCEEEEecCCCcee--------------------ece
Q psy7433 74 GKKGDICVIDLRQRV-------IRSRFNAHESPVKCLAIDP-HEEFFVTGAGDGDIK--------------------SPV 125 (213)
Q Consensus 74 ~~d~~v~iwd~~~~~-------~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~i~--------------------~~v 125 (213)
+.||.|++||+.++. ....+..|...|.+++|+| ++..|++++.++.++ ..|
T Consensus 201 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v 280 (430)
T 2xyi_A 201 SDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEV 280 (430)
T ss_dssp CTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCE
T ss_pred eCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCe
Confidence 999999999998732 1355667899999999999 678999999999876 678
Q ss_pred EEEEEccCCc-eEEEecCCCcEEEEEccC-CeeeeeecCCCCceeEEEecCCCeEEEEeCCCC--eEEEEecCCcEEEEe
Q psy7433 126 KCLAIDPHEE-FFVTGAGDGDIKVWSLSG-NHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS--RLFSCGADGSMKVRQ 201 (213)
Q Consensus 126 ~~~~~~~~~~-~l~~~~~dg~i~v~d~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~~d~~i~iw~ 201 (213)
++++|+|+++ ++++|+.||.|++||+++ ..++..+..|. ..|.+++|+|++ .|++++.|+.|++||
T Consensus 281 ~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~----------~~v~~i~~sp~~~~~l~s~~~d~~i~iwd 350 (430)
T 2xyi_A 281 NCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHK----------DEIFQVQWSPHNETILASSGTDRRLHVWD 350 (430)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCS----------SCEEEEEECSSCTTEEEEEETTSCCEEEE
T ss_pred EEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCC----------CCEEEEEECCCCCCEEEEEeCCCcEEEEe
Confidence 9999999987 688999999999999987 55677777665 789999999965 489999999999999
Q ss_pred CCC
Q psy7433 202 LPD 204 (213)
Q Consensus 202 ~~~ 204 (213)
+..
T Consensus 351 ~~~ 353 (430)
T 2xyi_A 351 LSK 353 (430)
T ss_dssp GGG
T ss_pred CCC
Confidence 986
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=8.4e-30 Score=193.03 Aligned_cols=203 Identities=13% Similarity=0.218 Sum_probs=161.7
Q ss_pred ccccccCceEEEEEeC-CCCeEEEeeccCCCccEEEEeCCCcccccceeee----------eeecCCceEEEEec-CCCE
Q psy7433 2 TYQCHNKITSDFVFLG-SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAF----------VCHDQGASSLVFAP-QHQL 69 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~-~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~----------~~~~~~v~~~~~~~-~~~~ 69 (213)
.+++|.+.|++++|+| ++++|+++ +.|+.|++||++........... .+|...|.+++|+| ++++
T Consensus 38 ~~~~h~~~v~~~~~s~~~~~~l~~~---~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 114 (408)
T 4a11_B 38 VERIHGGGINTLDIEPVEGRYMLSG---GSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGM 114 (408)
T ss_dssp ECCCCSSCEEEEEECTTTCCEEEEE---ETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTC
T ss_pred eeeccCCcEEEEEEecCCCCEEEEE---cCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcE
Confidence 4678999999999999 99999999 68999999999533222221111 24889999999999 7789
Q ss_pred EEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCC---CEEEEecCCCcee-----------------eceEEEE
Q psy7433 70 LISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHE---EFFVTGAGDGDIK-----------------SPVKCLA 129 (213)
Q Consensus 70 l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~---~~l~~~~~~~~i~-----------------~~v~~~~ 129 (213)
|++++.|+.|++||+++++....+. +...+.++.++|.+ ..+++++.++.+. ..|.+++
T Consensus 115 l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~ 193 (408)
T 4a11_B 115 FTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVS 193 (408)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEE
T ss_pred EEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEE
Confidence 9999999999999999998887776 67889999999844 4999999999876 6899999
Q ss_pred EccCCc-eEEEecCCCcEEEEEccCCe-eeeeecCCCCc-----eeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEe
Q psy7433 130 IDPHEE-FFVTGAGDGDIKVWSLSGNH-LLYNFPGEHAR-----SSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQ 201 (213)
Q Consensus 130 ~~~~~~-~l~~~~~dg~i~v~d~~~~~-~~~~~~~~~~~-----~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~ 201 (213)
|+|+++ ++++++.||.|++||++++. .+..+..+... ......+...|.+++|+|++ +|++++.||.|++||
T Consensus 194 ~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd 273 (408)
T 4a11_B 194 WSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWN 273 (408)
T ss_dssp ECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEE
Confidence 999998 58899999999999998765 34443221110 01112334789999999965 699999999999999
Q ss_pred CCCCccc
Q psy7433 202 LPDRDAV 208 (213)
Q Consensus 202 ~~~~~~~ 208 (213)
+.+++..
T Consensus 274 ~~~~~~~ 280 (408)
T 4a11_B 274 SSNGENT 280 (408)
T ss_dssp TTTCCBC
T ss_pred CCCCccc
Confidence 9987543
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=3.2e-30 Score=219.44 Aligned_cols=200 Identities=11% Similarity=0.192 Sum_probs=172.6
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
++.+|.+.|++++|+|++++++++ +.|+.|++||+ .+.+.+..+.+|...|.+++|+|++++|++++.|+.|++
T Consensus 610 ~~~~h~~~v~~~~~s~~~~~l~s~---~~d~~i~vw~~---~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~v 683 (1249)
T 3sfz_A 610 VVRPHTDAVYHACFSQDGQRIASC---GADKTLQVFKA---ETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKI 683 (1249)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEE---ETTSCEEEEET---TTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EEecccccEEEEEECCCCCEEEEE---eCCCeEEEEEC---CCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEE
Confidence 467899999999999999999999 68999999999 567788888999999999999999999999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecC--CCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecC
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDP--HEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAG 142 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~ 142 (213)
||+.+++.+..+..|...+.+++|+| ++..+++++.|+.++ ..|.+++|+|+++++++++.
T Consensus 684 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~ 763 (1249)
T 3sfz_A 684 WDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSA 763 (1249)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEES
T ss_pred EECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEEC
Confidence 99999999999999999999999999 556899999999876 67999999999999999999
Q ss_pred CCcEEEEEccCCeeeeeecCCCC---------------------------------------------ceeEEEecCCCe
Q psy7433 143 DGDIKVWSLSGNHLLYNFPGEHA---------------------------------------------RSSFFKHIGQGV 177 (213)
Q Consensus 143 dg~i~v~d~~~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~v 177 (213)
||.|++||+++++....+..... .......+...|
T Consensus 764 dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v 843 (1249)
T 3sfz_A 764 DGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTI 843 (1249)
T ss_dssp SSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCC
T ss_pred CCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCce
Confidence 99999999988776555432110 000111455789
Q ss_pred EEEEeCCCC-eEEEEecCCcEEEEeCCCCcc
Q psy7433 178 TQLHVDGGS-RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 178 ~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~ 207 (213)
.+++|+|++ .+++++.|+.|++||+.++..
T Consensus 844 ~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~ 874 (1249)
T 3sfz_A 844 QYCDFSPYDHLAVIALSQYCVELWNIDSRLK 874 (1249)
T ss_dssp CEEEECSSTTEEEEECSSSCEEEEETTTTEE
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEEcCCCce
Confidence 999999965 689999999999999987654
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=99.98 E-value=8.8e-31 Score=198.18 Aligned_cols=199 Identities=14% Similarity=0.194 Sum_probs=162.2
Q ss_pred ccccccCceEEEEEeCC----C---CeEEEeeccCCCccEEEEeCCCcccccc-----eeeeeee-----cCCceEEEEe
Q psy7433 2 TYQCHNKITSDFVFLGS----C---SLVATAGHSSESKNVCLWDSLLPQKKAL-----VQAFVCH-----DQGASSLVFA 64 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~----~---~~l~~~g~~s~~~~i~iwd~~~~~~~~~-----~~~~~~~-----~~~v~~~~~~ 64 (213)
++.+|...|.+++|+|+ + ++|+++ +.|+.|++||+ ..... +..+..| ...|.+++|+
T Consensus 57 ~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~---~~dg~i~iw~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 130 (397)
T 1sq9_A 57 SHFVHKSGLHHVDVLQAIERDAFELCLVATT---SFSGDLLFYRI---TREDETKKVIFEKLDLLDSDMKKHSFWALKWG 130 (397)
T ss_dssp EEECCTTCEEEEEEEEEEETTTEEEEEEEEE---ETTSCEEEEEE---EECTTTCCEEEEEECCSCTTGGGSCEEEEEEE
T ss_pred EEecCCCcEEEEEEecccccCCccccEEEEE---cCCCCEEEEEc---cCCcccccccceeecccccccCCCcEEEEEEe
Confidence 46789999999999999 9 999999 68999999998 44444 6777778 5899999999
Q ss_pred ----cCCCE-EEEEcCCCcEEEEeccC------ceEEE-----ec-------ccCCCCeeEEEecCCCCEEEEecCCCce
Q psy7433 65 ----PQHQL-LISAGKKGDICVIDLRQ------RVIRS-----RF-------NAHESPVKCLAIDPHEEFFVTGAGDGDI 121 (213)
Q Consensus 65 ----~~~~~-l~~~~~d~~v~iwd~~~------~~~~~-----~~-------~~~~~~i~~~~~~~~~~~l~~~~~~~~i 121 (213)
|++++ |++++.||.|++||+++ ++.+. .+ ..+...+.+++|+|++ .+++++.++.+
T Consensus 131 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i 209 (397)
T 1sq9_A 131 ASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTV 209 (397)
T ss_dssp CCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEE
T ss_pred eccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcE
Confidence 99999 99999999999999998 65544 55 4478899999999999 99999999987
Q ss_pred e--------------e---------ceEEEEEccCCceEEEecCC---CcEEEEEccCCeeeeeecCCCCceeEE---Ee
Q psy7433 122 K--------------S---------PVKCLAIDPHEEFFVTGAGD---GDIKVWSLSGNHLLYNFPGEHARSSFF---KH 172 (213)
Q Consensus 122 ~--------------~---------~v~~~~~~~~~~~l~~~~~d---g~i~v~d~~~~~~~~~~~~~~~~~~~~---~~ 172 (213)
+ . .+.+++|+|++++|++++.| +.|++||+++++.+..+.......... ..
T Consensus 210 ~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (397)
T 1sq9_A 210 QISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFA 289 (397)
T ss_dssp EEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBS
T ss_pred EEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccc
Confidence 5 3 37899999999999999999 999999999999888887611000000 00
Q ss_pred cCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCcc
Q psy7433 173 IGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 173 ~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~ 207 (213)
+...|.+++|+|++ +|++++.||.|++||+.+.+.
T Consensus 290 ~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 325 (397)
T 1sq9_A 290 HSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKER 325 (397)
T ss_dssp BSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEE
T ss_pred cCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCce
Confidence 23789999999864 699999999999999988754
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=7.6e-31 Score=195.61 Aligned_cols=186 Identities=17% Similarity=0.202 Sum_probs=158.4
Q ss_pred cccCceEEEEEeCC---CCeEEEeeccCCCccEEEEeCCCccccc-ceeeeeeecCCceEEEE------ecCCCEEEEEc
Q psy7433 5 CHNKITSDFVFLGS---CSLVATAGHSSESKNVCLWDSLLPQKKA-LVQAFVCHDQGASSLVF------APQHQLLISAG 74 (213)
Q Consensus 5 ~h~~~v~~~~~~~~---~~~l~~~g~~s~~~~i~iwd~~~~~~~~-~~~~~~~~~~~v~~~~~------~~~~~~l~~~~ 74 (213)
+|..+|.+++|+|+ +++|+++ +.|+.|++||++ ... .+..+.+|...|.+++| +|++++|++++
T Consensus 63 ~~~~~v~~~~~~~~~~~~~~l~~~---~~dg~i~iwd~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~ 136 (357)
T 3i2n_A 63 EKAKPIKCGTFGATSLQQRYLATG---DFGGNLHIWNLE---APEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGS 136 (357)
T ss_dssp EESSCEEEEECTTCCTTTCCEEEE---ETTSCEEEECTT---SCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEE
T ss_pred cccCcEEEEEEcCCCCCCceEEEe---cCCCeEEEEeCC---CCCccEEEEEecccceEEEeeccccccCCCccEEEEEe
Confidence 68999999999998 6999999 689999999994 344 67788899999999965 67899999999
Q ss_pred CCCcEEEEeccCce-EEEecccCCC----CeeEEE----ecCCCCEEEEecCCCcee----------------eceEEEE
Q psy7433 75 KKGDICVIDLRQRV-IRSRFNAHES----PVKCLA----IDPHEEFFVTGAGDGDIK----------------SPVKCLA 129 (213)
Q Consensus 75 ~d~~v~iwd~~~~~-~~~~~~~~~~----~i~~~~----~~~~~~~l~~~~~~~~i~----------------~~v~~~~ 129 (213)
.|+.|++||+++++ .+..+..+.. .+.+++ |+|+++.+++++.++.++ ..+.+++
T Consensus 137 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~ 216 (357)
T 3i2n_A 137 RDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLE 216 (357)
T ss_dssp TTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEE
T ss_pred CCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEE
Confidence 99999999999876 6666655444 788888 788999999999999886 7899999
Q ss_pred Ecc---CCceEEEecCCCcEEEEEccCCeeeeeec-----CCCCceeEEEecCCCeEEEEeCCCC--eEEEEecCCcEEE
Q psy7433 130 IDP---HEEFFVTGAGDGDIKVWSLSGNHLLYNFP-----GEHARSSFFKHIGQGVTQLHVDGGS--RLFSCGADGSMKV 199 (213)
Q Consensus 130 ~~~---~~~~l~~~~~dg~i~v~d~~~~~~~~~~~-----~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~~d~~i~i 199 (213)
|+| +++++++++.||.|++||+++++....+. .|. ..|.+++|+|++ .|++++.||.|++
T Consensus 217 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~----------~~v~~~~~~~~~~~~l~~~~~dg~i~i 286 (357)
T 3i2n_A 217 FDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHK----------STVWQVRHLPQNRELFLTAGGAGGLHL 286 (357)
T ss_dssp ESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCS----------SCEEEEEEETTEEEEEEEEETTSEEEE
T ss_pred cCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCc----------CCEEEEEECCCCCcEEEEEeCCCcEEE
Confidence 999 89999999999999999998876655544 444 789999999965 5899999999999
Q ss_pred EeCCCCc
Q psy7433 200 RQLPDRD 206 (213)
Q Consensus 200 w~~~~~~ 206 (213)
||+....
T Consensus 287 wd~~~~~ 293 (357)
T 3i2n_A 287 WKYEYPI 293 (357)
T ss_dssp EEEECCS
T ss_pred eecCCCc
Confidence 9998654
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=99.98 E-value=3.4e-30 Score=204.73 Aligned_cols=188 Identities=13% Similarity=0.167 Sum_probs=167.1
Q ss_pred ccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccc----cceeeeeeecCC-ceEEEEec--CCCEEEEEcCC
Q psy7433 4 QCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKK----ALVQAFVCHDQG-ASSLVFAP--QHQLLISAGKK 76 (213)
Q Consensus 4 ~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~----~~~~~~~~~~~~-v~~~~~~~--~~~~l~~~~~d 76 (213)
..|.+.|.+++|+|++++|+++ + ++.|++||+. +. +....+.+|... |.+++|+| ++++|++++.|
T Consensus 15 ~~~~~~v~~~~~spdg~~l~~~---~-~~~v~v~~~~---~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~d 87 (615)
T 1pgu_A 15 STQRNFTTHLSYDPTTNAIAYP---C-GKSAFVRCLD---DGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDES 87 (615)
T ss_dssp CCCTTCCCCCEEETTTTEEEEE---E-TTEEEEEECC---SSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETT
T ss_pred CCccCceeEEEECCCCCEEEEe---c-CCeEEEEECC---CCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCC
Confidence 3588999999999999999999 3 7899999994 44 678888899999 99999999 99999999999
Q ss_pred CcEEEEeccCc--------eEEEecccCCCCeeEEEecCCCCEEEEecCC----Ccee---------------eceEEEE
Q psy7433 77 GDICVIDLRQR--------VIRSRFNAHESPVKCLAIDPHEEFFVTGAGD----GDIK---------------SPVKCLA 129 (213)
Q Consensus 77 ~~v~iwd~~~~--------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~----~~i~---------------~~v~~~~ 129 (213)
|.|++||+.++ +....+..|..++.+++|+|+++++++++.+ +.+. ..|.+++
T Consensus 88 g~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~v~~~~ 167 (615)
T 1pgu_A 88 GKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACH 167 (615)
T ss_dssp SEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEE
T ss_pred CEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECCCcceeeecCCccEEEEE
Confidence 99999999754 6777788899999999999999999999987 3333 6799999
Q ss_pred EccCCc-eEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCC---CeEEEEeCCC-C-eEEEEecCCcEEEEeCC
Q psy7433 130 IDPHEE-FFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQ---GVTQLHVDGG-S-RLFSCGADGSMKVRQLP 203 (213)
Q Consensus 130 ~~~~~~-~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~-~-~l~s~~~d~~i~iw~~~ 203 (213)
|+|+++ ++++++.|+.|++||+++++.+..+..|. . .|.+++|+|+ + +|++++.|+.|++||+.
T Consensus 168 ~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~----------~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~ 237 (615)
T 1pgu_A 168 LKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHH----------KQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGK 237 (615)
T ss_dssp ECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSS----------CTTCCEEEEEECSTTCCEEEEEETTCCEEEEETT
T ss_pred ECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccC----------CCCceEEEEEECCCCCCEEEEEeCCCeEEEEECC
Confidence 999998 89999999999999999999999998875 5 7999999987 5 58999999999999998
Q ss_pred CCccc
Q psy7433 204 DRDAV 208 (213)
Q Consensus 204 ~~~~~ 208 (213)
+++.+
T Consensus 238 ~~~~~ 242 (615)
T 1pgu_A 238 SGEFL 242 (615)
T ss_dssp TCCEE
T ss_pred CCCEe
Confidence 87543
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.2e-30 Score=198.45 Aligned_cols=191 Identities=16% Similarity=0.271 Sum_probs=162.3
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCccc-ccceeeeeeecCCceEEEEecC-CCEEEEEcCCCcEEEE
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQK-KALVQAFVCHDQGASSLVFAPQ-HQLLISAGKKGDICVI 82 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~-~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~v~iw 82 (213)
.|...|.+++|+|++++|+++ +.|+.|++||+..... ...+..+..|...|.+++|+|+ +++|++++.|+.|++|
T Consensus 65 ~~~~~v~~~~~s~~~~~l~~~---~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iw 141 (416)
T 2pm9_A 65 QVDSKFNDLDWSHNNKIIAGA---LDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIW 141 (416)
T ss_dssp CCSSCEEEEEECSSSSCEEEE---ESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBC
T ss_pred ecCCceEEEEECCCCCeEEEE---ccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEE
Confidence 588899999999999999999 6899999999953212 3477778889999999999998 8999999999999999
Q ss_pred eccCce------EEEe---cccCCCCeeEEEecCC-CCEEEEecCCCcee-----------------------eceEEEE
Q psy7433 83 DLRQRV------IRSR---FNAHESPVKCLAIDPH-EEFFVTGAGDGDIK-----------------------SPVKCLA 129 (213)
Q Consensus 83 d~~~~~------~~~~---~~~~~~~i~~~~~~~~-~~~l~~~~~~~~i~-----------------------~~v~~~~ 129 (213)
|+++++ .... ...|...+.+++|+|+ +..+++++.|+.++ ..+.+++
T Consensus 142 d~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~ 221 (416)
T 2pm9_A 142 DMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVE 221 (416)
T ss_dssp BTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEE
T ss_pred ECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEE
Confidence 998876 3322 3568889999999998 78999999999876 2489999
Q ss_pred EccCC-ceEEEecCCC---cEEEEEccCC-eeeeeec-CCCCceeEEEecCCCeEEEEeCC-CC-eEEEEecCCcEEEEe
Q psy7433 130 IDPHE-EFFVTGAGDG---DIKVWSLSGN-HLLYNFP-GEHARSSFFKHIGQGVTQLHVDG-GS-RLFSCGADGSMKVRQ 201 (213)
Q Consensus 130 ~~~~~-~~l~~~~~dg---~i~v~d~~~~-~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~-~~-~l~s~~~d~~i~iw~ 201 (213)
|+|++ .++++++.|+ .|++||++++ .+...+. .|. ..|.+++|+| ++ +|++++.|+.|++||
T Consensus 222 ~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~----------~~v~~~~~s~~~~~~l~s~~~dg~v~~wd 291 (416)
T 2pm9_A 222 WHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQ----------KGILSLDWCHQDEHLLLSSGRDNTVLLWN 291 (416)
T ss_dssp ECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCS----------SCEEEEEECSSCSSCEEEEESSSEEEEEC
T ss_pred ECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCcc----------CceeEEEeCCCCCCeEEEEeCCCCEEEee
Confidence 99997 5899999998 9999999886 5666666 555 7899999998 54 699999999999999
Q ss_pred CCCCccc
Q psy7433 202 LPDRDAV 208 (213)
Q Consensus 202 ~~~~~~~ 208 (213)
+.+++.+
T Consensus 292 ~~~~~~~ 298 (416)
T 2pm9_A 292 PESAEQL 298 (416)
T ss_dssp SSSCCEE
T ss_pred CCCCccc
Confidence 9887543
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.2e-30 Score=200.24 Aligned_cols=196 Identities=12% Similarity=0.157 Sum_probs=153.9
Q ss_pred CceEEEEEeCCC--CeEEEeeccCCCccEEEEeCCCcccc------------------------------------ccee
Q psy7433 8 KITSDFVFLGSC--SLVATAGHSSESKNVCLWDSLLPQKK------------------------------------ALVQ 49 (213)
Q Consensus 8 ~~v~~~~~~~~~--~~l~~~g~~s~~~~i~iwd~~~~~~~------------------------------------~~~~ 49 (213)
+.|.+++|+|++ .+|+++ +.|+.|++||+...... ...+
T Consensus 94 ~~V~~l~~~~~~~~~~l~s~---s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (447)
T 3dw8_B 94 EKINKIRWLPQKNAAQFLLS---TNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRR 170 (447)
T ss_dssp CCCCEEEECCCCSSSEEEEE---ECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEE
T ss_pred CceEEEEEcCCCCcceEEEe---CCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceE
Confidence 889999999998 789998 68999999998421110 0011
Q ss_pred e-eeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCc-eEEE-------ecccCCCCeeEEEecCCC-CEEEEecCCC
Q psy7433 50 A-FVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR-VIRS-------RFNAHESPVKCLAIDPHE-EFFVTGAGDG 119 (213)
Q Consensus 50 ~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~-~~~~-------~~~~~~~~i~~~~~~~~~-~~l~~~~~~~ 119 (213)
. ..+|...|.+++|+|++++|+++ .|+.|++||+++. +... .+..|...|.+++|+|++ +.|++++.|+
T Consensus 171 ~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg 249 (447)
T 3dw8_B 171 IFANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKG 249 (447)
T ss_dssp EECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTS
T ss_pred EeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCC
Confidence 2 35688999999999999999999 7999999999844 4443 356789999999999998 9999999999
Q ss_pred cee---------------------e------------ceEEEEEccCCceEEEecCCCcEEEEEccC-CeeeeeecCCCC
Q psy7433 120 DIK---------------------S------------PVKCLAIDPHEEFFVTGAGDGDIKVWSLSG-NHLLYNFPGEHA 165 (213)
Q Consensus 120 ~i~---------------------~------------~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~-~~~~~~~~~~~~ 165 (213)
.++ . .|.+++|+|++++|++++. +.|++||+++ ++++..+..|..
T Consensus 250 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~ 328 (447)
T 3dw8_B 250 TIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEY 328 (447)
T ss_dssp CEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGG
T ss_pred eEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccc
Confidence 876 1 7999999999999999999 9999999987 888888877642
Q ss_pred ceeEE--EecC---CCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCccc
Q psy7433 166 RSSFF--KHIG---QGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 166 ~~~~~--~~~~---~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
..... .... ..+..++|+|++ +|++++.||.|++||+.+++.+
T Consensus 329 ~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~ 377 (447)
T 3dw8_B 329 LRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDI 377 (447)
T ss_dssp GTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEE
T ss_pred ccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcce
Confidence 10000 0000 013458999965 5999999999999999987543
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-29 Score=191.35 Aligned_cols=198 Identities=15% Similarity=0.230 Sum_probs=161.5
Q ss_pred ccccCceEEEEEeC-CCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecC---CCEEEEEcCCCcE
Q psy7433 4 QCHNKITSDFVFLG-SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQ---HQLLISAGKKGDI 79 (213)
Q Consensus 4 ~~h~~~v~~~~~~~-~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~v 79 (213)
.+|...|.+++|+| ++.+|+++ +.|+.|++||+ ...+.+..+. +...+.++.|+|. +.++++++.|+.|
T Consensus 96 ~~~~~~v~~~~~~~~~~~~l~s~---~~d~~i~iwd~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 168 (408)
T 4a11_B 96 DVHRYSVETVQWYPHDTGMFTSS---SFDKTLKVWDT---NTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKV 168 (408)
T ss_dssp TCCSSCEEEEEECTTCTTCEEEE---ETTSEEEEEET---TTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSE
T ss_pred ccCCCcEEEEEEccCCCcEEEEE---eCCCeEEEeeC---CCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeE
Confidence 46999999999999 77899998 68999999999 4455555554 6788999999984 4599999999999
Q ss_pred EEEeccCceEEEecccCCCCeeEEEecCCCC-EEEEecCCCcee---------------------------------ece
Q psy7433 80 CVIDLRQRVIRSRFNAHESPVKCLAIDPHEE-FFVTGAGDGDIK---------------------------------SPV 125 (213)
Q Consensus 80 ~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~~~~i~---------------------------------~~v 125 (213)
++||+++++.+..+..|...|.+++|+|+++ .+++++.|+.++ ..|
T Consensus 169 ~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 248 (408)
T 4a11_B 169 QLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKV 248 (408)
T ss_dssp EEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCE
T ss_pred EEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCce
Confidence 9999999998899999999999999999998 588999999876 458
Q ss_pred EEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCC-------------------------------------CCcee
Q psy7433 126 KCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGE-------------------------------------HARSS 168 (213)
Q Consensus 126 ~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~-------------------------------------~~~~~ 168 (213)
.+++|+|++++|++++.||.|++||+++++.......+ .....
T Consensus 249 ~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~ 328 (408)
T 4a11_B 249 NGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQIT 328 (408)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEE
T ss_pred eEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCccee
Confidence 99999999999999999999999999876544332211 01112
Q ss_pred EEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCccc
Q psy7433 169 FFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 169 ~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
.+..+...|++++|+|++ +|++++.||.|++||+.+.+.+
T Consensus 329 ~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~ 369 (408)
T 4a11_B 329 MLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPV 369 (408)
T ss_dssp EECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC----
T ss_pred eeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCcc
Confidence 234466899999999964 6999999999999999987654
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-30 Score=188.61 Aligned_cols=185 Identities=13% Similarity=0.139 Sum_probs=139.6
Q ss_pred cCceEEEEEeCC----CCeEEEeec-----------------cCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec
Q psy7433 7 NKITSDFVFLGS----CSLVATAGH-----------------SSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP 65 (213)
Q Consensus 7 ~~~v~~~~~~~~----~~~l~~~g~-----------------~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 65 (213)
.+.|++++++|+ +..++++|. ...|+.|++|++. ..++.+..+..|...++.++|++
T Consensus 111 ~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s--~dG~~~~s~~~~~~~v~~l~fs~ 188 (356)
T 2w18_A 111 IREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFA--EDGGGKENQFLMPPEETILTFAE 188 (356)
T ss_dssp EEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEEC--TTSCEEEEEEECCCSSCEEEEEE
T ss_pred ccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEEC--CCCceeeeeccCCCceeeEEeec
Confidence 346788888888 777777542 1248999999984 34667778889999999999999
Q ss_pred ---CCCEEEEEcCCCcEEEEeccCceEEEecccCC---CCeeEEEecCCCCEEE------------EecCCCcee-----
Q psy7433 66 ---QHQLLISAGKKGDICVIDLRQRVIRSRFNAHE---SPVKCLAIDPHEEFFV------------TGAGDGDIK----- 122 (213)
Q Consensus 66 ---~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~---~~i~~~~~~~~~~~l~------------~~~~~~~i~----- 122 (213)
++.+|++++.|++|++||+++++.++.+.++. ..+.+++|+|++.+++ +|+.|++++
T Consensus 189 ~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~ 268 (356)
T 2w18_A 189 VQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPK 268 (356)
T ss_dssp EETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETT
T ss_pred cCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECC
Confidence 77999999999999999999999999997644 3577789999998874 455666665
Q ss_pred --eceEEEEEc-cCCc------------eEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-
Q psy7433 123 --SPVKCLAID-PHEE------------FFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS- 186 (213)
Q Consensus 123 --~~v~~~~~~-~~~~------------~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~- 186 (213)
..+..+.+. |+|+ ++++++.|++|+|||+++++++.++.+|.. ..+..++|+|++
T Consensus 269 tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~---------~vvs~vafSPDG~ 339 (356)
T 2w18_A 269 TTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSD---------QHWSFVKWSGTDS 339 (356)
T ss_dssp TTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC-----------CCCCEEEECSSSS
T ss_pred CCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCC---------CeEEEEEECCCCC
Confidence 111112221 4443 578999999999999999999999988762 234568999975
Q ss_pred eEEEEecCCcEEEEeC
Q psy7433 187 RLFSCGADGSMKVRQL 202 (213)
Q Consensus 187 ~l~s~~~d~~i~iw~~ 202 (213)
+|++|+.|++|+|||+
T Consensus 340 ~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 340 HLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEEEECTTSCEEEEEE
T ss_pred EEEEEECCCcEEEecC
Confidence 5999999999999996
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.6e-31 Score=206.14 Aligned_cols=198 Identities=12% Similarity=0.158 Sum_probs=153.5
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEE--EEecCC-CEEEEEcCCCc
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSL--VFAPQH-QLLISAGKKGD 78 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~-~~l~~~~~d~~ 78 (213)
++.+|...|++++|+|++ .|+++ +.||+|++||++.+ ......+.+|...|.++ +|+|++ ++|++++.|++
T Consensus 261 ~l~~h~~~v~sv~~s~~~-~lasg---s~DgtV~lWD~~~~--~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~t 334 (524)
T 2j04_B 261 TLSLADSLITTFDFLSPT-TVVCG---FKNGFVAEFDLTDP--EVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGY 334 (524)
T ss_dssp EECCTTTCEEEEEESSSS-EEEEE---ETTSEEEEEETTBC--SSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSE
T ss_pred EEEcCCCCEEEEEecCCC-eEEEE---eCCCEEEEEECCCC--CCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCe
Confidence 467899999999999864 78888 79999999999422 23455678899999999 567887 89999999999
Q ss_pred EEEEeccCceEEEecccCC--CCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEE
Q psy7433 79 ICVIDLRQRVIRSRFNAHE--SPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVT 139 (213)
Q Consensus 79 v~iwd~~~~~~~~~~~~~~--~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~ 139 (213)
|++||+++++....+.+|. ..+.+++|+|++..+++++.|+.++ ..|.+++|+|++++|++
T Consensus 335 vklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~S 414 (524)
T 2j04_B 335 FYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLA 414 (524)
T ss_dssp EEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEE
T ss_pred EEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEE
Confidence 9999999887655555543 3578999999999999999998776 57999999999999999
Q ss_pred ecCCCcEEEEEccCC-----e---------eeeeecCCC--------------------CceeEEEecCCCeEEEEeCCC
Q psy7433 140 GAGDGDIKVWSLSGN-----H---------LLYNFPGEH--------------------ARSSFFKHIGQGVTQLHVDGG 185 (213)
Q Consensus 140 ~~~dg~i~v~d~~~~-----~---------~~~~~~~~~--------------------~~~~~~~~~~~~v~~~~~~~~ 185 (213)
|+.||+|++||+... + .+..+.... ........+...|.+++|+|+
T Consensus 415 gs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~ 494 (524)
T 2j04_B 415 GSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNET 494 (524)
T ss_dssp EETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCS
T ss_pred EECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCC
Confidence 999999999997421 0 111111100 011123456789999999996
Q ss_pred C----eEEEEecCCcEEEEeCCCC
Q psy7433 186 S----RLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 186 ~----~l~s~~~d~~i~iw~~~~~ 205 (213)
+ .+++|+.||.|+||++...
T Consensus 495 ~~~~~~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 495 SAGGKCYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp TTTTTEEEEECTTSEEEEEECSCC
T ss_pred CCccHHHHhhccCceEEEEEcccc
Confidence 4 5899999999999999764
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-29 Score=201.36 Aligned_cols=191 Identities=16% Similarity=0.242 Sum_probs=167.0
Q ss_pred ccccccCc-eEEEEEeC--CCCeEEEeeccCCCccEEEEeCCCcc-----cccceeeeeeecCCceEEEEecCCCEEEEE
Q psy7433 2 TYQCHNKI-TSDFVFLG--SCSLVATAGHSSESKNVCLWDSLLPQ-----KKALVQAFVCHDQGASSLVFAPQHQLLISA 73 (213)
Q Consensus 2 ~l~~h~~~-v~~~~~~~--~~~~l~~~g~~s~~~~i~iwd~~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 73 (213)
.+.+|.+. |.+++|+| ++++|+++ +.|+.|++||+.... ....+..+..|...|.+++|+|++++|+++
T Consensus 58 ~~~~h~~~~v~~~~~sp~~~~~~l~s~---~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 134 (615)
T 1pgu_A 58 QFTGHGSSVVTTVKFSPIKGSQYLCSG---DESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVV 134 (615)
T ss_dssp EECTTTTSCEEEEEECSSTTCCEEEEE---ETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred EEecCCCceEEEEEECcCCCCCEEEEe---cCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEe
Confidence 46789999 99999999 99999999 689999999983210 346667788899999999999999999999
Q ss_pred cCC----CcEEEEeccCceEEEecccCCCCeeEEEecCCCC-EEEEecCCCcee-----------------e---ceEEE
Q psy7433 74 GKK----GDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEE-FFVTGAGDGDIK-----------------S---PVKCL 128 (213)
Q Consensus 74 ~~d----~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~~~~i~-----------------~---~v~~~ 128 (213)
+.+ +.|.+|| .++.+..+..|...|.+++|+|+++ .+++++.|+.++ . .|.++
T Consensus 135 ~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~ 212 (615)
T 1pgu_A 135 GEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDV 212 (615)
T ss_dssp ECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEE
T ss_pred ccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEE
Confidence 887 6888888 5677888899999999999999998 899999999876 4 79999
Q ss_pred EEccC-CceEEEecCCCcEEEEEccCCeeeeee-c---CCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCC
Q psy7433 129 AIDPH-EEFFVTGAGDGDIKVWSLSGNHLLYNF-P---GEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLP 203 (213)
Q Consensus 129 ~~~~~-~~~l~~~~~dg~i~v~d~~~~~~~~~~-~---~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~ 203 (213)
+|+|+ +++|++++.||.|++||+++++.+..+ . .|. ..|.+++|+.+.+|++++.|+.|++||+.
T Consensus 213 ~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~----------~~v~~~~~~~~~~l~~~~~d~~i~~wd~~ 282 (615)
T 1pgu_A 213 EFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQ----------GGIFALSWLDSQKFATVGADATIRVWDVT 282 (615)
T ss_dssp EECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCC----------SCEEEEEESSSSEEEEEETTSEEEEEETT
T ss_pred EECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccC----------CceEEEEEcCCCEEEEEcCCCcEEEEECC
Confidence 99999 999999999999999999999998888 4 554 78999999933469999999999999999
Q ss_pred CCcc
Q psy7433 204 DRDA 207 (213)
Q Consensus 204 ~~~~ 207 (213)
+++.
T Consensus 283 ~~~~ 286 (615)
T 1pgu_A 283 TSKC 286 (615)
T ss_dssp TTEE
T ss_pred CCcE
Confidence 7654
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-29 Score=195.42 Aligned_cols=187 Identities=13% Similarity=0.131 Sum_probs=154.0
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeee----------------------------------
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV---------------------------------- 52 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~---------------------------------- 52 (213)
..++.+++|+|+|++|+++ .++.|++||+.++.....+..+.
T Consensus 4 ~~p~~~v~~s~dg~~l~~~----~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAI----IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSN 79 (450)
T ss_dssp ECCCCEEEECSSSSEEEEE----ETTEEEEEEEETTTEEEEEEEEECCC-------------------------------
T ss_pred cccEEEEEecCCCCEEEEE----eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccC
Confidence 4688999999999987776 57899999984333111333333
Q ss_pred --------------------eecCCceEEEEecCCCEE-EEEcCCCcEEEEecc--CceEEEecc--cCCCCeeEEEecC
Q psy7433 53 --------------------CHDQGASSLVFAPQHQLL-ISAGKKGDICVIDLR--QRVIRSRFN--AHESPVKCLAIDP 107 (213)
Q Consensus 53 --------------------~~~~~v~~~~~~~~~~~l-~~~~~d~~v~iwd~~--~~~~~~~~~--~~~~~i~~~~~~~ 107 (213)
.|...|.+++|+|++++| ++++.||.|++||+. +++.+..+. .+...+.+++|+|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp 159 (450)
T 2vdu_B 80 KGDSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAE 159 (450)
T ss_dssp --------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECT
T ss_pred cCccccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcC
Confidence 233369999999999996 899999999999999 787777775 5678899999999
Q ss_pred CCCEEEEecCCCcee---------------------eceEEEEEccC---CceEEEecCCCcEEEEEccCCeeeee-ecC
Q psy7433 108 HEEFFVTGAGDGDIK---------------------SPVKCLAIDPH---EEFFVTGAGDGDIKVWSLSGNHLLYN-FPG 162 (213)
Q Consensus 108 ~~~~l~~~~~~~~i~---------------------~~v~~~~~~~~---~~~l~~~~~dg~i~v~d~~~~~~~~~-~~~ 162 (213)
++++|++++.++.+. ..|.+++|+|+ +++|++++.|+.|++||+++++.+.. +.+
T Consensus 160 ~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~ 239 (450)
T 2vdu_B 160 DDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFG 239 (450)
T ss_dssp TSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCC
T ss_pred CCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecC
Confidence 999999999988764 56899999999 99999999999999999998887776 445
Q ss_pred CCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCcc
Q psy7433 163 EHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 163 ~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~ 207 (213)
|. ..|.+++|+.+.+|++++.|+.|++||+.+++.
T Consensus 240 h~----------~~v~~~~~sd~~~l~s~~~d~~v~vwd~~~~~~ 274 (450)
T 2vdu_B 240 HK----------HFVSSICCGKDYLLLSAGGDDKIFAWDWKTGKN 274 (450)
T ss_dssp CS----------SCEEEEEECSTTEEEEEESSSEEEEEETTTCCE
T ss_pred CC----------CceEEEEECCCCEEEEEeCCCeEEEEECCCCcE
Confidence 54 789999999334699999999999999998754
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-29 Score=192.20 Aligned_cols=182 Identities=18% Similarity=0.261 Sum_probs=159.2
Q ss_pred ccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEecc
Q psy7433 6 HNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLR 85 (213)
Q Consensus 6 h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~ 85 (213)
|...|.+++|+|++++|+++ +.||.|++||+ ...+.+..+..|...|.+++| ++++|++++.||.|++||++
T Consensus 133 ~~~~v~~v~~s~~~~~l~~~---~~dg~i~iwd~---~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~ 204 (401)
T 4aez_A 133 ESTYVASVKWSHDGSFLSVG---LGNGLVDIYDV---ESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVR 204 (401)
T ss_dssp TTCCEEEEEECTTSSEEEEE---ETTSCEEEEET---TTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETT
T ss_pred CCCCEEEEEECCCCCEEEEE---CCCCeEEEEEC---cCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecc
Confidence 78899999999999999999 68999999999 566778888899999999999 45799999999999999998
Q ss_pred -CceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCc-eEEEec--CCC
Q psy7433 86 -QRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEE-FFVTGA--GDG 144 (213)
Q Consensus 86 -~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~-~l~~~~--~dg 144 (213)
.......+..|...|.+++|+|++++|++++.|+.++ ..|.+++|+|++. ++++++ .|+
T Consensus 205 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~ 284 (401)
T 4aez_A 205 IANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDK 284 (401)
T ss_dssp SSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTC
T ss_pred cCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCC
Confidence 4567778888999999999999999999999999886 6789999999876 556654 799
Q ss_pred cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEE--EecCCcEEEEeCCCCc
Q psy7433 145 DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFS--CGADGSMKVRQLPDRD 206 (213)
Q Consensus 145 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s--~~~d~~i~iw~~~~~~ 206 (213)
.|++||+++++.+..+..+ ..|.+++|+|++ .+++ |+.||.|++||+.++.
T Consensus 285 ~i~i~d~~~~~~~~~~~~~-----------~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~ 338 (401)
T 4aez_A 285 QIHFWNAATGARVNTVDAG-----------SQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSG 338 (401)
T ss_dssp EEEEEETTTCCEEEEEECS-----------SCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTE
T ss_pred EEEEEECCCCCEEEEEeCC-----------CcEEEEEECCCCCeEEEEeecCCCcEEEEecCCcc
Confidence 9999999999888888643 579999999965 4666 4489999999998753
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-29 Score=194.42 Aligned_cols=194 Identities=16% Similarity=0.190 Sum_probs=158.5
Q ss_pred ccccCceEEEEEeCCCCeE-EEeeccCCCccEEEEeCCCcccccceeeee--eecCCceEEEEecCCCEEEEEcCCCcEE
Q psy7433 4 QCHNKITSDFVFLGSCSLV-ATAGHSSESKNVCLWDSLLPQKKALVQAFV--CHDQGASSLVFAPQHQLLISAGKKGDIC 80 (213)
Q Consensus 4 ~~h~~~v~~~~~~~~~~~l-~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 80 (213)
++|.+.|++++|+|++++| +++ +.|+.|++||+.. ..+..+..+. .|...|.+++|+|++++|++++.+|.++
T Consensus 99 ~~~~~~v~~~~~s~d~~~l~~~~---~~dg~v~iwd~~~-~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~ 174 (450)
T 2vdu_B 99 PPIYSYIRNLRLTSDESRLIACA---DSDKSLLVFDVDK-TSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVY 174 (450)
T ss_dssp -CCCCCEEEEEECTTSSEEEEEE---GGGTEEEEEEECS-SSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred CccCCceEEEEEcCCCCEEEEEE---CCCCeEEEEECcC-CCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEE
Confidence 4677789999999999996 777 6899999999841 0455666665 4568899999999999999999999999
Q ss_pred EEeccCceEEE----ecccCCCCeeEEEecCC---CCEEEEecCCCcee------------------eceEEEEEccCCc
Q psy7433 81 VIDLRQRVIRS----RFNAHESPVKCLAIDPH---EEFFVTGAGDGDIK------------------SPVKCLAIDPHEE 135 (213)
Q Consensus 81 iwd~~~~~~~~----~~~~~~~~i~~~~~~~~---~~~l~~~~~~~~i~------------------~~v~~~~~~~~~~ 135 (213)
+|++.+++... .+.+|...|.+++|+|+ +++|++++.|+.++ ..|.+++|+ +++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~ 253 (450)
T 2vdu_B 175 SIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDY 253 (450)
T ss_dssp EEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STT
T ss_pred EEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCC
Confidence 99998876443 67789999999999999 99999999999886 678999999 999
Q ss_pred eEEEecCCCcEEEEEccCCeeeeeecCCCCce---------------eEEEecCCCeEEEEeCCCC-eEEEEe-cCCcEE
Q psy7433 136 FFVTGAGDGDIKVWSLSGNHLLYNFPGEHARS---------------SFFKHIGQGVTQLHVDGGS-RLFSCG-ADGSMK 198 (213)
Q Consensus 136 ~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~---------------~~~~~~~~~v~~~~~~~~~-~l~s~~-~d~~i~ 198 (213)
+|++++.|+.|++||+++++.+..+..+.... .........|.+++|+|++ +|++++ .|+.|+
T Consensus 254 ~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~ 333 (450)
T 2vdu_B 254 LLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCII 333 (450)
T ss_dssp EEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEE
T ss_pred EEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEE
Confidence 99999999999999999998887776431000 0000123579999999965 577777 899999
Q ss_pred EEeC
Q psy7433 199 VRQL 202 (213)
Q Consensus 199 iw~~ 202 (213)
+|++
T Consensus 334 iw~~ 337 (450)
T 2vdu_B 334 ILEM 337 (450)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9999
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.7e-30 Score=208.37 Aligned_cols=190 Identities=18% Similarity=0.255 Sum_probs=160.8
Q ss_pred ccccccCceEEEEEeCC--CCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecC--CCEEEEEcCCC
Q psy7433 2 TYQCHNKITSDFVFLGS--CSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQ--HQLLISAGKKG 77 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~--~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~ 77 (213)
++.+|.++|++++|+|+ +++|+++ +.||.|++||++.. ....+..+..|...|.+++|+|+ ++++++|+.||
T Consensus 48 ~l~~h~~~V~~l~~s~~~~~~~l~s~---s~Dg~I~vwd~~~~-~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg 123 (753)
T 3jro_A 48 TLTGHEGPVWRVDWAHPKFGTILASC---SYDGKVLIWKEENG-RWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDG 123 (753)
T ss_dssp EECCCSSCEEEEEECCTTSCSEEEEE---ETTSCEEEEEEETT-EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred eccCCcCceEEEEecCCCCCCEEEEE---eCCCeEEEEECCCC-cccccccccCCCCCeEEEEECCCCCCCEEEEEeCCC
Confidence 46789999999999987 9999999 68999999998431 12366777789999999999998 99999999999
Q ss_pred cEEEEeccCc--eEEEecccCCCCeeEEEecC-------------CCCEEEEecCCCcee--------------------
Q psy7433 78 DICVIDLRQR--VIRSRFNAHESPVKCLAIDP-------------HEEFFVTGAGDGDIK-------------------- 122 (213)
Q Consensus 78 ~v~iwd~~~~--~~~~~~~~~~~~i~~~~~~~-------------~~~~l~~~~~~~~i~-------------------- 122 (213)
.|++||++++ .....+..|...+.+++|+| ++..+++++.|+.++
T Consensus 124 ~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h 203 (753)
T 3jro_A 124 KVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH 203 (753)
T ss_dssp EEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCC
T ss_pred cEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCC
Confidence 9999999887 33445667899999999999 589999999999876
Q ss_pred -eceEEEEEccC---CceEEEecCCCcEEEEEccCCe-----eeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEe
Q psy7433 123 -SPVKCLAIDPH---EEFFVTGAGDGDIKVWSLSGNH-----LLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCG 192 (213)
Q Consensus 123 -~~v~~~~~~~~---~~~l~~~~~dg~i~v~d~~~~~-----~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~ 192 (213)
..|.+++|+|+ ++++++++.||.|++||++++. .......+ ...|++++|+|++ ++++++
T Consensus 204 ~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~----------~~~v~~l~~spdg~~l~s~s 273 (753)
T 3jro_A 204 SDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKF----------PDVLWRASWSLSGNVLALSG 273 (753)
T ss_dssp SSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCC----------SSCCCCEEECTTTCCEEEEC
T ss_pred CCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCC----------CCceEEEEEcCCCCEEEEEc
Confidence 56899999999 8999999999999999998764 22222223 2789999999965 599999
Q ss_pred cCCcEEEEeCCCC
Q psy7433 193 ADGSMKVRQLPDR 205 (213)
Q Consensus 193 ~d~~i~iw~~~~~ 205 (213)
.||.|++|++..+
T Consensus 274 ~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 274 GDNKVTLWKENLE 286 (753)
T ss_dssp SSSCEECCBCCSS
T ss_pred CCCEEEEEecCCC
Confidence 9999999999854
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.7e-29 Score=212.89 Aligned_cols=187 Identities=19% Similarity=0.330 Sum_probs=168.7
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec--CCCEEEEEcCCCcE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP--QHQLLISAGKKGDI 79 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~v 79 (213)
++++|.+.|.+++|+|++++|+++ +.|+.|++||+ .+++.+..+.+|...|.+++|+| ++.++++++.|+.|
T Consensus 652 ~~~~h~~~v~~~~~s~~~~~l~s~---~~d~~v~vwd~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v 725 (1249)
T 3sfz_A 652 DIKAHEDEVLCCAFSSDDSYIATC---SADKKVKIWDS---ATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFL 725 (1249)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEE---ETTSEEEEEET---TTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCE
T ss_pred EeccCCCCEEEEEEecCCCEEEEE---eCCCeEEEEEC---CCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeE
Confidence 467899999999999999999999 68999999999 56778888999999999999999 55689999999999
Q ss_pred EEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-------------------------------------
Q psy7433 80 CVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------------------------- 122 (213)
Q Consensus 80 ~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------------------------- 122 (213)
++||+++++....+.+|...|.+++|+|+++.+++++.|+.++
T Consensus 726 ~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 805 (1249)
T 3sfz_A 726 KLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCS 805 (1249)
T ss_dssp EEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCC
T ss_pred EEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEE
Confidence 9999999999999999999999999999999999999999775
Q ss_pred -----------------------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCce
Q psy7433 123 -----------------------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARS 167 (213)
Q Consensus 123 -----------------------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~ 167 (213)
..+.+++|+|+++++++++.||.|++||+.++..+..+.+|.
T Consensus 806 ~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~--- 882 (1249)
T 3sfz_A 806 WSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHL--- 882 (1249)
T ss_dssp BCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCS---
T ss_pred ECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCc---
Confidence 235677888888889999999999999999888888888876
Q ss_pred eEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCC
Q psy7433 168 SFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 168 ~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~ 204 (213)
..|.+++|+|++ .|++++.|+.|++|++.+
T Consensus 883 -------~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~ 913 (1249)
T 3sfz_A 883 -------SWVHGVMFSPDGSSFLTASDDQTIRVWETKK 913 (1249)
T ss_dssp -------SCEEEEEECTTSSEEEEEETTSCEEEEEHHH
T ss_pred -------cceEEEEECCCCCEEEEEeCCCeEEEEEccc
Confidence 789999999965 699999999999999764
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-29 Score=192.41 Aligned_cols=185 Identities=12% Similarity=0.110 Sum_probs=144.5
Q ss_pred ccccccCceEEEEEeC--------CCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCC-CEEEE
Q psy7433 2 TYQCHNKITSDFVFLG--------SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQH-QLLIS 72 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~--------~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~ 72 (213)
++++|.+.|++++|+| ++++||++ +.|++|+|||+ .....+..+..|...+.+++|+|++ ++|++
T Consensus 131 ~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~---s~D~tv~~Wd~---~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~ 204 (393)
T 4gq1_A 131 GKSGHHNFVNDIDIADVYSADNRLAEQVIASV---GDDCTLIIWRL---TDEGPILAGYPLSSPGISVQFRPSNPNQLIV 204 (393)
T ss_dssp TTTSCSSCEEEEEEEEEECTTCSEEEEEEEEE---ETTSEEEEEEE---ETTEEEEEEEECSSCEEEEEEETTEEEEEEE
T ss_pred ccCCCCCceEEEEEccccccccCCCCCEEEEE---ECCCeEEEEEC---CCCceeeeecCCCCCcEEEEECCCCCceEEe
Confidence 4789999999999998 78999999 68999999998 4556666777889999999999976 58999
Q ss_pred EcCCCcEEEEeccCceEEEe-------------------------cccCCCCeeEEEec-CCCCEEEEecCCCcee----
Q psy7433 73 AGKKGDICVIDLRQRVIRSR-------------------------FNAHESPVKCLAID-PHEEFFVTGAGDGDIK---- 122 (213)
Q Consensus 73 ~~~d~~v~iwd~~~~~~~~~-------------------------~~~~~~~i~~~~~~-~~~~~l~~~~~~~~i~---- 122 (213)
++.|+.|++||+++++.... ..+|...+.++.|. |+++.+++++.|+.++
T Consensus 205 ~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~ 284 (393)
T 4gq1_A 205 GERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNL 284 (393)
T ss_dssp EETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC
T ss_pred cCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEEC
Confidence 99999999999987654322 12456678889886 7999999999999876
Q ss_pred -------------------------------eceEEEEEcc--CCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeE
Q psy7433 123 -------------------------------SPVKCLAIDP--HEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSF 169 (213)
Q Consensus 123 -------------------------------~~v~~~~~~~--~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~ 169 (213)
.......|+| ++.++++|+.||.|++||+.+++....+..+.
T Consensus 285 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~----- 359 (393)
T 4gq1_A 285 FANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLG----- 359 (393)
T ss_dssp -------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECS-----
T ss_pred ccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCC-----
Confidence 1111223433 34477888999999999999888777766665
Q ss_pred EEecCCCeEEEEeCCCCe-EEEEecCCcEEEEeCC
Q psy7433 170 FKHIGQGVTQLHVDGGSR-LFSCGADGSMKVRQLP 203 (213)
Q Consensus 170 ~~~~~~~v~~~~~~~~~~-l~s~~~d~~i~iw~~~ 203 (213)
.+|.+++|+|++. ||+++. +.+.+|.+.
T Consensus 360 -----~~V~svafspdG~~LA~as~-~Gv~lvrL~ 388 (393)
T 4gq1_A 360 -----MPIVDFCWHQDGSHLAIATE-GSVLLTRLM 388 (393)
T ss_dssp -----SCEEEEEECTTSSEEEEEES-SEEEEEEEG
T ss_pred -----CcEEEEEEcCCCCEEEEEeC-CCeEEEEEe
Confidence 6899999999775 666655 457777654
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=99.97 E-value=4.8e-29 Score=189.41 Aligned_cols=187 Identities=9% Similarity=0.079 Sum_probs=156.3
Q ss_pred eEEEEEeCCCCeEEEeeccCCCccEEEEeCCCccc-ccceeeeeeecCCceEEEEec-CCCEEEEEcCCCcEEEEeccCc
Q psy7433 10 TSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQK-KALVQAFVCHDQGASSLVFAP-QHQLLISAGKKGDICVIDLRQR 87 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~-~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~iwd~~~~ 87 (213)
...++++|+...++..+ +.+|.|++|+++.... ...+..+.+|...|.+++|+| ++++|++++.||.|++||+.++
T Consensus 37 ~~~~~~~~~~~~~~~~~--~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~ 114 (402)
T 2aq5_A 37 SGFCAVNPKFMALICEA--SGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDG 114 (402)
T ss_dssp SCSEEECSSEEEEEBCC--SSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTT
T ss_pred CCcEEECCCeEEEEEEE--cCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCC
Confidence 44578888776555433 6899999999853221 135556778999999999999 8999999999999999999987
Q ss_pred -------eEEEecccCCCCeeEEEecCCC-CEEEEecCCCcee-------------------eceEEEEEccCCceEEEe
Q psy7433 88 -------VIRSRFNAHESPVKCLAIDPHE-EFFVTGAGDGDIK-------------------SPVKCLAIDPHEEFFVTG 140 (213)
Q Consensus 88 -------~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~~~~i~-------------------~~v~~~~~~~~~~~l~~~ 140 (213)
+++..+.+|...|.+++|+|++ ..|++++.|+.++ ..|.+++|+|++++|+++
T Consensus 115 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 194 (402)
T 2aq5_A 115 GLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTS 194 (402)
T ss_dssp CCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEE
T ss_pred CCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEE
Confidence 5677888899999999999998 6999999999876 468999999999999999
Q ss_pred cCCCcEEEEEccCCeeeeee-cCCCCceeEEEecCCCeEEEEeCCCCe-EEEE---ecCCcEEEEeCCCCcc
Q psy7433 141 AGDGDIKVWSLSGNHLLYNF-PGEHARSSFFKHIGQGVTQLHVDGGSR-LFSC---GADGSMKVRQLPDRDA 207 (213)
Q Consensus 141 ~~dg~i~v~d~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~---~~d~~i~iw~~~~~~~ 207 (213)
+.|+.|++||+++++.+..+ ..|.. ..+.++.|+|++. |+++ +.|+.|++||+.+...
T Consensus 195 ~~d~~i~iwd~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~ 257 (402)
T 2aq5_A 195 CRDKRVRVIEPRKGTVVAEKDRPHEG---------TRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEE 257 (402)
T ss_dssp ETTSEEEEEETTTTEEEEEEECSSCS---------SSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSS
T ss_pred ecCCcEEEEeCCCCceeeeeccCCCC---------CcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccC
Confidence 99999999999999998888 55541 3489999999776 5666 5899999999988654
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.5e-28 Score=187.06 Aligned_cols=186 Identities=16% Similarity=0.264 Sum_probs=148.8
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec--CCCEEEEEcCCCcE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP--QHQLLISAGKKGDI 79 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~v 79 (213)
++.+|.+.|.+++|+|++ +|+++ +.|++|++||+ .+.+.+..+.+|...|.+++|++ +++++++++.|+.|
T Consensus 157 ~~~~h~~~V~~l~~~~~~-~l~s~---s~dg~i~vwd~---~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i 229 (464)
T 3v7d_B 157 QLSGHDGGVWALKYAHGG-ILVSG---STDRTVRVWDI---KKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTL 229 (464)
T ss_dssp EECCCSSCEEEEEECSTT-EEEEE---ETTSCEEEEET---TTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCE
T ss_pred EEeCCCcCEEEEEEcCCC-EEEEE---eCCCCEEEEEC---CCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcE
Confidence 467899999999999988 88888 68999999999 45667777888888888888874 54555555555555
Q ss_pred EEE---------------------------------------------------------------eccCceEEEecccC
Q psy7433 80 CVI---------------------------------------------------------------DLRQRVIRSRFNAH 96 (213)
Q Consensus 80 ~iw---------------------------------------------------------------d~~~~~~~~~~~~~ 96 (213)
++| |+++++.+..+.+|
T Consensus 230 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~ 309 (464)
T 3v7d_B 230 HVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGH 309 (464)
T ss_dssp EEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred EEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC
Confidence 555 44455556667778
Q ss_pred CCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeee
Q psy7433 97 ESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYN 159 (213)
Q Consensus 97 ~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~ 159 (213)
...+.+++|+|+++.+++++.|+.++ ..|.++.|+ ++++++++.||.|++||++++.....
T Consensus 310 ~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~ 387 (464)
T 3v7d_B 310 TDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFS 387 (464)
T ss_dssp SSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred CCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeee
Confidence 89999999999999999999999887 678889987 57999999999999999998776665
Q ss_pred ecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEecCCcEEEEeCCCCccc
Q psy7433 160 FPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 160 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~d~~i~iw~~~~~~~~ 208 (213)
.... ..+..+++++++. +++++ ||.|++||+.+++.+
T Consensus 388 ~~~~-----------~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~ 425 (464)
T 3v7d_B 388 YHHT-----------NLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLV 425 (464)
T ss_dssp EECT-----------TCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEE
T ss_pred ecCC-----------CCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEE
Confidence 5432 4677788888665 55655 999999999998654
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=99.97 E-value=7e-28 Score=185.25 Aligned_cols=183 Identities=20% Similarity=0.345 Sum_probs=159.4
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
.+++|.+.|.. ++.+++++|+++ +.|+.|++||+ .+++.+..+.+|...|.+++|+ ++++++++.||.|++
T Consensus 113 ~l~~h~~~v~~-~~~~~g~~l~sg---~~dg~i~vwd~---~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~v 183 (445)
T 2ovr_B 113 VLKGHDDHVIT-CLQFCGNRIVSG---SDDNTLKVWSA---VTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKV 183 (445)
T ss_dssp EEECSTTSCEE-EEEEETTEEEEE---ETTSCEEEEET---TTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEE
T ss_pred EecccCCCcEE-EEEEcCCEEEEE---ECCCcEEEEEC---CCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEE
Confidence 46789887543 355678999999 68999999999 5677888889999999999997 569999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCCC
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDG 144 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg 144 (213)
||+.+++.+..+..|...|.+++++ ++.+++++.|+.++ ..+.+++| +++++++++.||
T Consensus 184 wd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg 259 (445)
T 2ovr_B 184 WNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDF 259 (445)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTS
T ss_pred EECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCC
Confidence 9999999999999999999999996 56899999999886 57888888 688999999999
Q ss_pred cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCccc
Q psy7433 145 DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 145 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
.|++||+++++.+..+..|. ..|.++.+ .+..+++++.|+.|++||+.+++.+
T Consensus 260 ~i~iwd~~~~~~~~~~~~~~----------~~v~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~ 312 (445)
T 2ovr_B 260 MVKVWDPETETCLHTLQGHT----------NRVYSLQF-DGIHVVSGSLDTSIRVWDVETGNCI 312 (445)
T ss_dssp CEEEEEGGGTEEEEEECCCS----------SCEEEEEE-CSSEEEEEETTSCEEEEETTTCCEE
T ss_pred EEEEEECCCCcEeEEecCCC----------CceEEEEE-CCCEEEEEeCCCeEEEEECCCCCEE
Confidence 99999999999999998776 67999998 4567999999999999999877543
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=99.97 E-value=6.7e-28 Score=184.93 Aligned_cols=179 Identities=16% Similarity=0.316 Sum_probs=157.9
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEec
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDL 84 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~ 84 (213)
+|...|.++.+ ++++|+++ +.|+.|++||+ .+.+.+..+.+|...|.+++| ++++|++|+.||.|++||+
T Consensus 131 ~~~~~v~~~~~--d~~~l~~g---~~dg~i~iwd~---~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~ 200 (435)
T 1p22_A 131 ETSKGVYCLQY--DDQKIVSG---LRDNTIKIWDK---NTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDV 200 (435)
T ss_dssp SSCCCEEEEEC--CSSEEEEE---ESSSCEEEEES---SSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEES
T ss_pred CCCCcEEEEEE--CCCEEEEE---eCCCeEEEEeC---CCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEEC
Confidence 45667888776 78999999 68999999998 567788888899999999998 7889999999999999999
Q ss_pred cCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee--------------------eceEEEEEccCCceEEEecCCC
Q psy7433 85 RQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK--------------------SPVKCLAIDPHEEFFVTGAGDG 144 (213)
Q Consensus 85 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~--------------------~~v~~~~~~~~~~~l~~~~~dg 144 (213)
++++.+..+..|...|.+++|++ ..+++++.|+.++ ..|.+++| +++++++|+.||
T Consensus 201 ~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg 276 (435)
T 1p22_A 201 NTGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDR 276 (435)
T ss_dssp SSCCEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTS
T ss_pred CCCcEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCC
Confidence 99999999999999999999974 5899999999886 46778888 678999999999
Q ss_pred cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCccc
Q psy7433 145 DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 145 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
.|++||+++++.+..+..|. ..|.++.++ +..+++++.||.|++||+.+++.+
T Consensus 277 ~i~vwd~~~~~~~~~~~~~~----------~~v~~~~~~-~~~l~~g~~dg~i~iwd~~~~~~~ 329 (435)
T 1p22_A 277 TIKVWNTSTCEFVRTLNGHK----------RGIACLQYR-DRLVVSGSSDNTIRLWDIECGACL 329 (435)
T ss_dssp EEEEEETTTCCEEEEEECCS----------SCEEEEEEE-TTEEEEEETTSCEEEEETTTCCEE
T ss_pred eEEEEECCcCcEEEEEcCCC----------CcEEEEEeC-CCEEEEEeCCCeEEEEECCCCCEE
Confidence 99999999999999988876 679999985 468999999999999999887543
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-27 Score=178.89 Aligned_cols=185 Identities=16% Similarity=0.231 Sum_probs=144.5
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEE-EEEcCCCcEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLL-ISAGKKGDIC 80 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~v~ 80 (213)
++++|...|++++|+|+|++||++ +.+ .+++|+++ ........ +...+..+++.++++.+ ++++.|+.|+
T Consensus 14 ~~~~h~~~V~~v~fs~dg~~la~g---~~~-~~~iw~~~---~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~v~ 84 (355)
T 3vu4_A 14 PENHVSNPVTDYEFNQDQSCLILS---TLK-SFEIYNVH---PVAHIMSQ--EMRHLSKVRMLHRTNYVAFVTGVKEVVH 84 (355)
T ss_dssp -----CCCCCEEEECTTSSEEEEE---CSS-EEEEEEET---TEEEEEEE--ECSCCCEEEECTTSSEEEEECSSTTEEE
T ss_pred ccccCCCceEEEEECCCCCEEEEE---cCC-EEEEEecC---Ccceeeee--ecCCeEEEEEcCCCCEEEEEECCccEEE
Confidence 357899999999999999999998 445 58899983 33333322 33458889999988877 5677889999
Q ss_pred EEeccCceEEEecccCCCCeeEEEecCCC-----------------------------------CEEEE--ecCCCcee-
Q psy7433 81 VIDLRQRVIRSRFNAHESPVKCLAIDPHE-----------------------------------EFFVT--GAGDGDIK- 122 (213)
Q Consensus 81 iwd~~~~~~~~~~~~~~~~i~~~~~~~~~-----------------------------------~~l~~--~~~~~~i~- 122 (213)
+||+.+++.+..+. +...+.+++++++. ..+++ ++.++.++
T Consensus 85 iWd~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~i 163 (355)
T 3vu4_A 85 IWDDVKKQDVSRIK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHI 163 (355)
T ss_dssp EEETTTTEEEEEEE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEE
T ss_pred EEECCCCcEEEEEE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEE
Confidence 99999998888776 56678888887642 22333 45555442
Q ss_pred --------------------------------eceEEEEEccCCceEEEecCCCc-EEEEEccCCeeeeeec-C-CCCce
Q psy7433 123 --------------------------------SPVKCLAIDPHEEFFVTGAGDGD-IKVWSLSGNHLLYNFP-G-EHARS 167 (213)
Q Consensus 123 --------------------------------~~v~~~~~~~~~~~l~~~~~dg~-i~v~d~~~~~~~~~~~-~-~~~~~ 167 (213)
..|.+++|+|++++|++|+.|++ |++||+++++++..+. + |.
T Consensus 164 wd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~--- 240 (355)
T 3vu4_A 164 TKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDR--- 240 (355)
T ss_dssp EECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCC---
T ss_pred EECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCC---
Confidence 46899999999999999999998 9999999999999987 4 54
Q ss_pred eEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCc
Q psy7433 168 SFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 168 ~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~ 206 (213)
..|.+++|+|++ +|++++.|+.|++||+....
T Consensus 241 -------~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 241 -------ADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp -------SCEEEEEECTTSCEEEEEETTCEEEEEESSCCS
T ss_pred -------CcEEEEEECCCCCEEEEEECCCEEEEEEccCCC
Confidence 789999999965 69999999999999998653
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-28 Score=183.62 Aligned_cols=194 Identities=9% Similarity=0.068 Sum_probs=147.2
Q ss_pred ccccccCceEEEEEeCCCCeEEEeec--------cCCCccEEEEeCCCcccc-cceeee-----eeecCCceEEEEecCC
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGH--------SSESKNVCLWDSLLPQKK-ALVQAF-----VCHDQGASSLVFAPQH 67 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~--------~s~~~~i~iwd~~~~~~~-~~~~~~-----~~~~~~v~~~~~~~~~ 67 (213)
+|.+|...|.+++++ ++.++++.. ++.|+.+++|++...... +..... ..+...+.+++|+|||
T Consensus 68 ~l~~~~~~v~s~~~~--~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg 145 (365)
T 4h5i_A 68 ALEDNDDSPTAIDAS--KGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREG 145 (365)
T ss_dssp ECCTTSCCCCEEEEE--TTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTS
T ss_pred EccCCCCceEEEEeC--CCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCC
Confidence 366788888888765 456665421 145788999997422111 111111 1234568899999999
Q ss_pred CEEEE--EcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee------------------eceEE
Q psy7433 68 QLLIS--AGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------SPVKC 127 (213)
Q Consensus 68 ~~l~~--~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------~~v~~ 127 (213)
+++++ ++.|+.|++||+++++.+..+. |...|.+++|+|+++++++++.++... ..+.+
T Consensus 146 ~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 224 (365)
T 4h5i_A 146 TVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKNWSLSK 224 (365)
T ss_dssp SCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTTEEEEE
T ss_pred CEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCCCCEEE
Confidence 98764 4578999999999999888876 778899999999999999998776543 57899
Q ss_pred EEEccCCceEEEecCCC----cEEEEEccCCee----eeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEE
Q psy7433 128 LAIDPHEEFFVTGAGDG----DIKVWSLSGNHL----LYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMK 198 (213)
Q Consensus 128 ~~~~~~~~~l~~~~~dg----~i~v~d~~~~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~ 198 (213)
++|+|+++++++++.|+ .+++||+..... ...+..|. ..|++++|+|++ +||+|+.|+.|+
T Consensus 225 v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~----------~~V~~~~~Spdg~~lasgs~D~~V~ 294 (365)
T 4h5i_A 225 INFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRF----------KGITSMDVDMKGELAVLASNDNSIA 294 (365)
T ss_dssp EEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSC----------SCEEEEEECTTSCEEEEEETTSCEE
T ss_pred EEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCC----------CCeEeEEECCCCCceEEEcCCCEEE
Confidence 99999999999998887 688899876543 23444544 789999999976 589999999999
Q ss_pred EEeCCCCccc
Q psy7433 199 VRQLPDRDAV 208 (213)
Q Consensus 199 iw~~~~~~~~ 208 (213)
|||+.+++.+
T Consensus 295 iwd~~~~~~~ 304 (365)
T 4h5i_A 295 LVKLKDLSMS 304 (365)
T ss_dssp EEETTTTEEE
T ss_pred EEECCCCcEE
Confidence 9999987654
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=7.3e-29 Score=204.92 Aligned_cols=195 Identities=11% Similarity=0.148 Sum_probs=152.6
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeee---------eecCCceEEEEecCCCEEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV---------CHDQGASSLVFAPQHQLLIS 72 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~l~~ 72 (213)
.|++|...+.+++|+|++++||++ +.|++|++||+..... .....+. +|...|.+++|+|++++||+
T Consensus 430 ~l~G~~~~v~sv~~spdg~~laSg---s~DgtVrlWd~~~g~~-~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAs 505 (902)
T 2oaj_A 430 LLKGGVRTKRQKLPAEYGTAFITG---HSNGSVRIYDASHGDI-QDNASFEVNLSRTLNKAKELAVDKISFAAETLELAV 505 (902)
T ss_dssp SCCCSBCCCCCCCCCSEEEEEEEE---ETTSEEEEEESSCCTT-TTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEE
T ss_pred cccCCcCCCCcccccccCcEEEEe---cCCCcEEEEECCCccc-cCCceEEeechhhcCCCCCCceeEEEecCCCCeEEE
Confidence 467888888888999999999999 7999999999954321 1111111 67889999999999999999
Q ss_pred EcCCCcEEEEeccCc---------------------------------------------eEEEecccCCCCeeEEEecC
Q psy7433 73 AGKKGDICVIDLRQR---------------------------------------------VIRSRFNAHESPVKCLAIDP 107 (213)
Q Consensus 73 ~~~d~~v~iwd~~~~---------------------------------------------~~~~~~~~~~~~i~~~~~~~ 107 (213)
|+.||+|++||+.++ +++..+.+|.+.|++++|+|
T Consensus 506 gs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSp 585 (902)
T 2oaj_A 506 SIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSN 585 (902)
T ss_dssp EETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECB
T ss_pred EecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecC
Confidence 999999999999865 23567788999999999999
Q ss_pred CCCEEEEecCCCcee-----------------------eceEEEEEc-----cCC---ceEEEecCCCcEEEEEc---cC
Q psy7433 108 HEEFFVTGAGDGDIK-----------------------SPVKCLAID-----PHE---EFFVTGAGDGDIKVWSL---SG 153 (213)
Q Consensus 108 ~~~~l~~~~~~~~i~-----------------------~~v~~~~~~-----~~~---~~l~~~~~dg~i~v~d~---~~ 153 (213)
+| +|++|+.|+.++ ..|++++|+ ||| ++|++|+.|++|++||+ .+
T Consensus 586 dG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~ 664 (902)
T 2oaj_A 586 IG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASG 664 (902)
T ss_dssp TS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGG
T ss_pred Cc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCC
Confidence 99 999999999875 128999999 885 79999999999999999 77
Q ss_pred CeeeeeecCCCCceeEEEecCCCeEEEE-eC----------------------CCCeEEEEecCCcEEEEeCCCCcc
Q psy7433 154 NHLLYNFPGEHARSSFFKHIGQGVTQLH-VD----------------------GGSRLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~----------------------~~~~l~s~~~d~~i~iw~~~~~~~ 207 (213)
++....+.+|... .+.++|..+. ++ +++++++++ +..||||++.+++.
T Consensus 665 g~~~~~~~~~~~~-----~~~~~v~~i~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l~~~-~~~ir~~~~~~~k~ 735 (902)
T 2oaj_A 665 GKFDVQLMDITNV-----TSKGPIHKIDAFSKETKSSCLATIPKMQNLSKGLCIPGIVLITG-FDDIRLITLGKSKS 735 (902)
T ss_dssp GCEEEEEEEEEEC-----CSSCCCCEEEEEETTTCCBCBCBHHHHHGGGGTCCCCEEEEEEC-SSEEEEECTTCCCE
T ss_pred CcEEEEecCceec-----CCCCceEEEEeEecCCCCcccCCHHHHhccCCCCCCCeEEEEEe-ccceEEEeCccccc
Confidence 7777777665311 0113444444 33 344555554 77999999998754
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.1e-28 Score=187.42 Aligned_cols=174 Identities=12% Similarity=0.104 Sum_probs=144.3
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecC-----CceEEEEecCCCEEEEEcCCCcE
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQ-----GASSLVFAPQHQLLISAGKKGDI 79 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~d~~v 79 (213)
.|...|.+++|+|+|.+||++ +.||.|++||. .. ++..+. |.. .+.+++|||+|++|++|+.||+|
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~---s~dg~V~iwd~---~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtV 153 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVL---SNNGNVSVFKD---NK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGEL 153 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEE---ETTSCEEEEET---TE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEE
T ss_pred CCCCcEEEEEECCCCCEEEEE---eCCCcEEEEeC---Cc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEE
Confidence 567889999999999999999 79999999996 22 555555 554 49999999999999999999999
Q ss_pred EEEeccCce-------EEEec----ccCCCCeeEEEecCCCCEEEEecCCCcee---------------------eceEE
Q psy7433 80 CVIDLRQRV-------IRSRF----NAHESPVKCLAIDPHEEFFVTGAGDGDIK---------------------SPVKC 127 (213)
Q Consensus 80 ~iwd~~~~~-------~~~~~----~~~~~~i~~~~~~~~~~~l~~~~~~~~i~---------------------~~v~~ 127 (213)
++||+.++. .+..+ .+|...|.+++|+|++ +++++.|+.++ ..|.+
T Consensus 154 kIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~s 231 (588)
T 2j04_A 154 QFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITD 231 (588)
T ss_dssp EEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCC
T ss_pred EEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEE
Confidence 999999874 35565 5677899999999999 78888888664 34778
Q ss_pred EEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEe--CCCCe-EEEEecCCcEEEEeCC
Q psy7433 128 LAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHV--DGGSR-LFSCGADGSMKVRQLP 203 (213)
Q Consensus 128 ~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~-l~s~~~d~~i~iw~~~ 203 (213)
++|+ ++++++++ ++.|++||+.+++......+|. ..+..+++ +|++. +++++.||. ++|...
T Consensus 232 vaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~----------~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 232 LKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSL----------ENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp EEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCC----------SCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred EEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCC----------ceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 8898 68888887 6999999999887744443565 78999999 88874 788888999 999975
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=99.96 E-value=9.9e-28 Score=183.98 Aligned_cols=180 Identities=21% Similarity=0.393 Sum_probs=157.9
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
++.+|.+.|.+++| ++++|+++ +.||.|++||+ .+++.+..+..|...|.+++|++ +.+++++.||.|++
T Consensus 168 ~~~~h~~~v~~l~~--~~~~l~sg---~~dg~i~vwd~---~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~v 237 (435)
T 1p22_A 168 ILTGHTGSVLCLQY--DERVIITG---SSDSTVRVWDV---NTGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAV 237 (435)
T ss_dssp EECCCSSCEEEEEC--CSSEEEEE---ETTSCEEEEES---SSCCEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEE
T ss_pred EEcCCCCcEEEEEE--CCCEEEEE---cCCCeEEEEEC---CCCcEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEE
Confidence 46789999999998 78899999 68999999999 56677888889999999999974 59999999999999
Q ss_pred EeccCceEE---EecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEec
Q psy7433 82 IDLRQRVIR---SRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGA 141 (213)
Q Consensus 82 wd~~~~~~~---~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~ 141 (213)
||+++++.. ..+.+|...+.++++ +++.+++++.|+.++ ..+.++.|+ ++++++|+
T Consensus 238 wd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~ 313 (435)
T 1p22_A 238 WDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGS 313 (435)
T ss_dssp EECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEE
T ss_pred EeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEEEEEe
Confidence 999887544 567789999999999 688999999999886 567888884 68999999
Q ss_pred CCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCc
Q psy7433 142 GDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 142 ~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~ 206 (213)
.||.|++||+++++++..+.+|. ..|.++++ .+.+|++++.||.|++||+.++.
T Consensus 314 ~dg~i~iwd~~~~~~~~~~~~h~----------~~v~~~~~-~~~~l~sg~~dg~i~vwd~~~~~ 367 (435)
T 1p22_A 314 SDNTIRLWDIECGACLRVLEGHE----------ELVRCIRF-DNKRIVSGAYDGKIKVWDLVAAL 367 (435)
T ss_dssp TTSCEEEEETTTCCEEEEECCCS----------SCEEEEEC-CSSEEEEEETTSCEEEEEHHHHT
T ss_pred CCCeEEEEECCCCCEEEEEeCCc----------CcEEEEEe-cCCEEEEEeCCCcEEEEECCCCC
Confidence 99999999999999999998876 78999999 45689999999999999986543
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-27 Score=194.91 Aligned_cols=190 Identities=19% Similarity=0.288 Sum_probs=166.3
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec-CCCEEEEEcCCCcEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP-QHQLLISAGKKGDIC 80 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~ 80 (213)
++.+|.+.|++++|+|++++|+++ +.|+.|++||++ ........+.+|...|.+++|+| +++.|++++.||.|+
T Consensus 92 ~~~~~~~~v~~~~~s~~~~~l~~~---~~dg~i~vw~~~--~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~ 166 (814)
T 3mkq_A 92 DFEAHPDYIRSIAVHPTKPYVLSG---SDDLTVKLWNWE--NNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVK 166 (814)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEE---ETTSEEEEEEGG--GTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEE
T ss_pred EEecCCCCEEEEEEeCCCCEEEEE---cCCCEEEEEECC--CCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEE
Confidence 467899999999999999999999 689999999984 22356677888999999999999 889999999999999
Q ss_pred EEeccCceEEEecccCC-CCeeEEEecC--CCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEe
Q psy7433 81 VIDLRQRVIRSRFNAHE-SPVKCLAIDP--HEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTG 140 (213)
Q Consensus 81 iwd~~~~~~~~~~~~~~-~~i~~~~~~~--~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~ 140 (213)
+||+++++....+..+. ..+.+++|+| ++..+++++.++.++ ..|.+++|+|++++++++
T Consensus 167 vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 246 (814)
T 3mkq_A 167 VWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISG 246 (814)
T ss_dssp EEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEE
T ss_pred EEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEE
Confidence 99998887766665544 8899999999 999999999999886 579999999999999999
Q ss_pred cCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe--EEEEecCCcEEEEeCCCCc
Q psy7433 141 AGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR--LFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 141 ~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--l~s~~~d~~i~iw~~~~~~ 206 (213)
+.||.|++||+.+++....+..+. ..+.+++|+|++. +++.+.++.+.+|++....
T Consensus 247 ~~dg~v~vwd~~~~~~~~~~~~~~----------~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (814)
T 3mkq_A 247 SEDGTLKIWNSSTYKVEKTLNVGL----------ERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDE 304 (814)
T ss_dssp ETTSCEEEEETTTCSEEEEECCSS----------SSEEEEEECTTCGGGEEEEEETTEEEEEECSCCS
T ss_pred eCCCeEEEEECCCCcEEEEeecCC----------CcEEEEEEccCCCceEEEEEeCCCEEEEEcCCCC
Confidence 999999999999999988888775 6899999999764 5667778889999987653
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.4e-27 Score=180.82 Aligned_cols=181 Identities=17% Similarity=0.287 Sum_probs=161.3
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
++++|.+.|.+++|+ +++++++ +.|+.|++||+ .+.+.+..+.+|...|.++.|+ ++.+++++.||.|++
T Consensus 154 ~~~~h~~~v~~~~~~--~~~l~s~---~~dg~i~vwd~---~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~ 223 (445)
T 2ovr_B 154 TLVGHTGGVWSSQMR--DNIIISG---STDRTLKVWNA---ETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRV 223 (445)
T ss_dssp ECCCCSSCEEEEEEE--TTEEEEE---ETTSCEEEEET---TTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEE
T ss_pred EEcCCCCCEEEEEec--CCEEEEE---eCCCeEEEEEC---CcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEE
Confidence 567899999999997 5689998 68999999999 5667788888999999999995 568999999999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCCC
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDG 144 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg 144 (213)
||+++++.+..+..|...+.++++ +++.+++++.|+.++ ..+.++.| +++++++++.|+
T Consensus 224 wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~ 299 (445)
T 2ovr_B 224 WDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDT 299 (445)
T ss_dssp EESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTS
T ss_pred EECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCC
Confidence 999999999999999999999999 688999999999886 56888888 788999999999
Q ss_pred cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCcc
Q psy7433 145 DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 145 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~ 207 (213)
.|++||+++++.+..+..|. ..+.++.++ ++.+++++.||.|++||+.+++.
T Consensus 300 ~i~i~d~~~~~~~~~~~~~~----------~~v~~~~~~-~~~l~~~~~dg~i~vwd~~~~~~ 351 (445)
T 2ovr_B 300 SIRVWDVETGNCIHTLTGHQ----------SLTSGMELK-DNILVSGNADSTVKIWDIKTGQC 351 (445)
T ss_dssp CEEEEETTTCCEEEEECCCC----------SCEEEEEEE-TTEEEEEETTSCEEEEETTTCCE
T ss_pred eEEEEECCCCCEEEEEcCCc----------ccEEEEEEe-CCEEEEEeCCCeEEEEECCCCcE
Confidence 99999999999999988876 678888886 45899999999999999987754
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=99.96 E-value=5.2e-29 Score=188.83 Aligned_cols=193 Identities=11% Similarity=0.059 Sum_probs=135.9
Q ss_pred EEEeCCCCeEEEeeccCCCccEEEEeCCCccc--ccceeeeeeecCCceEEEEec--------CCCEEEEEcCCCcEEEE
Q psy7433 13 FVFLGSCSLVATAGHSSESKNVCLWDSLLPQK--KALVQAFVCHDQGASSLVFAP--------QHQLLISAGKKGDICVI 82 (213)
Q Consensus 13 ~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~--~~~~~~~~~~~~~v~~~~~~~--------~~~~l~~~~~d~~v~iw 82 (213)
..+.+++.+||++ +.|++|+|||.+.... ...+..+.+|.+.|++++|+| ++++|++++.|++|++|
T Consensus 95 ~~~~~~~~~las~---~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~W 171 (393)
T 4gq1_A 95 NSSPVYSLFLACV---CQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIW 171 (393)
T ss_dssp --CCEEEEEEEEE---ETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEE
T ss_pred eecCCCCCEEEEE---eCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEE
Confidence 3344466688998 7899999999843221 123445678999999999998 78899999999999999
Q ss_pred eccCceEEEecccCCCCeeEEEecCCCC-EEEEecCCCcee---------------------------------------
Q psy7433 83 DLRQRVIRSRFNAHESPVKCLAIDPHEE-FFVTGAGDGDIK--------------------------------------- 122 (213)
Q Consensus 83 d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~~~~i~--------------------------------------- 122 (213)
|++++..+..+..|..++.+++|+|++. +|++++.|+.++
T Consensus 172 d~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 251 (393)
T 4gq1_A 172 RLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSS 251 (393)
T ss_dssp EEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------
T ss_pred ECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecc
Confidence 9999888888888999999999999875 799999999886
Q ss_pred ---eceEEEEEc-cCCceEEEecCCCcEEEEEccCCeeeeeecCCCCcee--------EEEecCCCeEEEEeCC--CCe-
Q psy7433 123 ---SPVKCLAID-PHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSS--------FFKHIGQGVTQLHVDG--GSR- 187 (213)
Q Consensus 123 ---~~v~~~~~~-~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~--------~~~~~~~~v~~~~~~~--~~~- 187 (213)
..+.++.|+ |+++.+++++.|+.+++||+..+.....+..+..... .............++| ++.
T Consensus 252 ~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (393)
T 4gq1_A 252 GIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYF 331 (393)
T ss_dssp CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEE
T ss_pred cccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEE
Confidence 346678876 7999999999999999999987776655554331110 0001111222233443 344
Q ss_pred EEEEecCCcEEEEeCCCCccc
Q psy7433 188 LFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 188 l~s~~~d~~i~iw~~~~~~~~ 208 (213)
+++++.||.|++||+.+++..
T Consensus 332 ~~sgs~Dg~V~lwd~~~~~~~ 352 (393)
T 4gq1_A 332 ATAHSQHGLIQLINTYEKDSN 352 (393)
T ss_dssp EEEETTTTEEEEEETTCTTCC
T ss_pred EEEECCCCEEEEEECCCCcEE
Confidence 677888999999999987654
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=99.96 E-value=7.6e-27 Score=178.34 Aligned_cols=179 Identities=16% Similarity=0.248 Sum_probs=148.5
Q ss_pred eEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeee--eecCCceEEEEecCCCEEEEEcCCCcEEEEeccCc
Q psy7433 10 TSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV--CHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR 87 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~ 87 (213)
++.|+|+++ ++||++ .|++|+|||. .+++....+. .|...|++++|+|+|++|++|+.||.|++||++++
T Consensus 108 ~~~l~wS~~-n~lAvg----ld~tV~lWd~---~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~ 179 (420)
T 4gga_A 108 LNLVDWSSG-NVLAVA----LDNSVYLWSA---SSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ 179 (420)
T ss_dssp CBCEEECTT-SEEEEE----ETTEEEEEET---TTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred ceeEEECCC-CEEEEE----eCCEEEEEEC---CCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCC
Confidence 567999975 588877 5999999998 4555555544 56778999999999999999999999999999999
Q ss_pred eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee------------------eceEEEEEccCCceEEEecCCCcEEEE
Q psy7433 88 VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------SPVKCLAIDPHEEFFVTGAGDGDIKVW 149 (213)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~ 149 (213)
+.+..+.+|...+.+++++ +..+++++.|+.+. ..+..+.|+|+++++++++.|+.+++|
T Consensus 180 ~~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~ 257 (420)
T 4gga_A 180 KRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVW 257 (420)
T ss_dssp EEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred cEEEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEE
Confidence 9999999999999988876 67899999999876 678899999999999999999999999
Q ss_pred EccCCee----eeeecCCCCceeEEEecCCCeEEEEeCCCC--eEEE--EecCCcEEEEeCCCCccc
Q psy7433 150 SLSGNHL----LYNFPGEHARSSFFKHIGQGVTQLHVDGGS--RLFS--CGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 150 d~~~~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s--~~~d~~i~iw~~~~~~~~ 208 (213)
|..+++. +.....+. ..|.+++|+|.+ .+++ |+.|+.|++||+.++...
T Consensus 258 ~~~~~~~~~~~~~~~~~~~----------~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~ 314 (420)
T 4gga_A 258 PSAPGEGGWVPLQTFTQHQ----------GAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACL 314 (420)
T ss_dssp ESSCCSSCSCCSEEECCCS----------SCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEE
T ss_pred eeccccccceeeeeecccC----------CceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccc
Confidence 9976543 33344443 789999999843 4544 457999999999987543
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-28 Score=181.88 Aligned_cols=171 Identities=11% Similarity=0.123 Sum_probs=140.7
Q ss_pred eCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEecc---------C
Q psy7433 16 LGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLR---------Q 86 (213)
Q Consensus 16 ~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~---------~ 86 (213)
.+++.+|+++ +.|+.|++||+ .+++.+..+. ...|.++.|+|+ +++++.|+.|++|+.. +
T Consensus 45 ~~d~~~l~sg---~~Dg~v~iwd~---~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~ 113 (343)
T 3lrv_A 45 YYDKWVCMCR---CEDGALHFTQL---KDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKT 113 (343)
T ss_dssp SEEEEEEEEE---EETTEEEEEEE---SSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTT
T ss_pred cCCCCEEEEE---CCCCcEEEEEC---CCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCC
Confidence 3577889999 68999999999 4555665554 456888889888 9999999999999765 4
Q ss_pred ceEEEecc-cCCCCeeEEEecC--CCCEEEEecCCCcee------------------eceEEEEEccCCceEEEecCCCc
Q psy7433 87 RVIRSRFN-AHESPVKCLAIDP--HEEFFVTGAGDGDIK------------------SPVKCLAIDPHEEFFVTGAGDGD 145 (213)
Q Consensus 87 ~~~~~~~~-~~~~~i~~~~~~~--~~~~l~~~~~~~~i~------------------~~v~~~~~~~~~~~l~~~~~dg~ 145 (213)
++.+..+. .|..+|.+++|+| +++++++++.|+.++ ..+.+++|+|++++|++|+.||.
T Consensus 114 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~ 193 (343)
T 3lrv_A 114 NKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGI 193 (343)
T ss_dssp CCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSC
T ss_pred cceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCE
Confidence 44344443 5667899999999 999999999999886 46899999999999999999999
Q ss_pred EEEEEccCCeee-eeecC-CCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCccc
Q psy7433 146 IKVWSLSGNHLL-YNFPG-EHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 146 i~v~d~~~~~~~-~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
|++||+++++.. ..+.. |. .+|++++|+|++ +|++++ |+.|++||+++.+.+
T Consensus 194 i~iwd~~~~~~~~~~~~~~h~----------~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~ 248 (343)
T 3lrv_A 194 LDVYNLSSPDQASSRFPVDEE----------AKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGT 248 (343)
T ss_dssp EEEEESSCTTSCCEECCCCTT----------SCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTC
T ss_pred EEEEECCCCCCCccEEeccCC----------CCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcc
Confidence 999999988877 67776 54 789999999976 477777 559999999987543
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-28 Score=189.35 Aligned_cols=171 Identities=12% Similarity=0.167 Sum_probs=139.4
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEec
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDL 84 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~ 84 (213)
+-...|.+++|+|||+++|++ +.|++|+ |. ...+.+ .+|...|.+++|+|+| .++.+.+|+.
T Consensus 13 ~~~~~v~sv~~SpDG~~iASa---s~D~TV~--d~---~~~~~l---~gh~~~v~~V~FsPdg-------~~~~~~~~~~ 74 (588)
T 2j04_A 13 EFEDWKNNLTWARDGTLYLTT---FPDISIG--QP---KYAKDI---NCNSKNLFHVKEFPLE-------FENKLDFELA 74 (588)
T ss_dssp CCSSSSCCEEECTTSCEEEEC---SSSEEEE--EE---CCCSCC---SSBGGGTEEEEEECCC-------CCCTTTTSCC
T ss_pred HhhccEEEEEECCCCCEEEEE---cCCceee--cc---ccccee---cCCCccEEEEEECCCC-------CcceEEEEeC
Confidence 345789999999999999999 7999999 64 344333 6899999999999998 4555555554
Q ss_pred cCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-------------e------ceEEEEEccCCceEEEecCCCc
Q psy7433 85 RQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-------------S------PVKCLAIDPHEEFFVTGAGDGD 145 (213)
Q Consensus 85 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-------------~------~v~~~~~~~~~~~l~~~~~dg~ 145 (213)
+... ...+ .+...|.+++|+|+|..|++++.|+.++ . .+.+++|||+|++|++|+.||+
T Consensus 75 ~~~~-~~~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DGt 152 (588)
T 2j04_A 75 QQNG-LLNS-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNKMLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDGE 152 (588)
T ss_dssp CSSC-SSTT-SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTEEEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTSE
T ss_pred CCce-Eeec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCceeeeccCCCccccccEEEEEEcCCCCEEEEEcCCCE
Confidence 3222 2222 3578899999999999999999999875 1 3999999999999999999999
Q ss_pred EEEEEccCCe-------eeeee----cCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCc
Q psy7433 146 IKVWSLSGNH-------LLYNF----PGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 146 i~v~d~~~~~-------~~~~~----~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~ 206 (213)
|++||++.+. .+.++ .+|. ..|.+++|+|++ +++++.|+.|++|++.++.
T Consensus 153 VkIWd~~~~~l~~~~~i~l~ti~~~~~gh~----------~~V~sVawSPdg-Laass~D~tVrlWd~~~~~ 213 (588)
T 2j04_A 153 LQFFSIRKNSENTPEFYFESSIRLSDAGSK----------DWVTHIVWYEDV-LVAALSNNSVFSMTVSASS 213 (588)
T ss_dssp EEEEECCCCTTTCCCCEEEEEEECSCTTCC----------CCEEEEEEETTE-EEEEETTCCEEEECCCSSS
T ss_pred EEEEECCCCccccccceeeeeeeccccccc----------ccEEEEEEcCCc-EEEEeCCCeEEEEECCCCc
Confidence 9999998764 24555 3333 689999999999 9999999999999998776
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-26 Score=168.72 Aligned_cols=179 Identities=15% Similarity=0.206 Sum_probs=146.3
Q ss_pred eEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeee--eecCCceEEEEecCCCEEEEEcCCCcEEEEeccCc
Q psy7433 10 TSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV--CHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR 87 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~ 87 (213)
.++|+||+++ +||++ .|++|+|||+ .+++++..+. .|...|++++|+|++++|++|+.||.|++||++++
T Consensus 28 ~~~l~WS~~~-~lAvg----~D~tV~iWd~---~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~ 99 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA----LDNSVYLWSA---SSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ 99 (318)
T ss_dssp CBCEEECTTS-EEEEE----ETTEEEEEET---TTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred ceEEEECCCC-EEEEE----eCCEEEEEEC---CCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCc
Confidence 4679999876 77776 5999999998 4566666554 56778999999999999999999999999999999
Q ss_pred eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee------------------eceEEEEEccCCceEEEecCCCcEEEE
Q psy7433 88 VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------SPVKCLAIDPHEEFFVTGAGDGDIKVW 149 (213)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~ 149 (213)
+.+..+.+|...+.++.+. +..+++++.++.+. ..+..+.++++++++++++.|+.|++|
T Consensus 100 ~~~~~~~~h~~~~~~~~~~--~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iw 177 (318)
T 4ggc_A 100 KRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVW 177 (318)
T ss_dssp EEEEEEECCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred eeEEEecCccceEEEeecC--CCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEE
Confidence 9999999998888776654 67899999998775 678899999999999999999999999
Q ss_pred EccCCeee----eeecCCCCceeEEEecCCCeEEEEeCCCC--e--EEEEecCCcEEEEeCCCCccc
Q psy7433 150 SLSGNHLL----YNFPGEHARSSFFKHIGQGVTQLHVDGGS--R--LFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 150 d~~~~~~~----~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~--l~s~~~d~~i~iw~~~~~~~~ 208 (213)
|+++++.. .....+ ...|.++.+.|.+ . +++++.++.|++||.......
T Consensus 178 d~~~~~~~~~~~~~~~~~----------~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~ 234 (318)
T 4ggc_A 178 PSAPGEGGWVPLQTFTQH----------QGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACL 234 (318)
T ss_dssp ESSCBTTBSCCSEEECCC----------CSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEE
T ss_pred ECCCCcccccceeeeccc----------CCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccc
Confidence 99876532 222222 2689999999843 2 356778999999999876543
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-26 Score=173.07 Aligned_cols=180 Identities=12% Similarity=0.073 Sum_probs=142.2
Q ss_pred cccCceEEEEEeC--CCCeEEEeeccCCCccEEEEeCCCcccccceeeee-eecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 5 CHNKITSDFVFLG--SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV-CHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 5 ~h~~~v~~~~~~~--~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
+|.++|.+++|+| ++++|+++ +.|+.|++||++ ..+.+.... .+...+.+++|+|++.+|++|+.||.|++
T Consensus 123 ~~~~~v~~~~~~~~~~~~~l~s~---s~dg~i~~wd~~---~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~i 196 (343)
T 3lrv_A 123 DSANEIIYMYGHNEVNTEYFIWA---DNRGTIGFQSYE---DDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDV 196 (343)
T ss_dssp CCSSCEEEEECCC---CCEEEEE---ETTCCEEEEESS---SSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEE
T ss_pred CCCCCEEEEEcCCCCCCCEEEEE---eCCCcEEEEECC---CCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEE
Confidence 4558899999999 99999999 689999999994 444444442 34557999999999999999999999999
Q ss_pred EeccCceEE-Eeccc-CCCCeeEEEecCCCCEEEEecCCCcee--------------------ece--EEEEEccCCceE
Q psy7433 82 IDLRQRVIR-SRFNA-HESPVKCLAIDPHEEFFVTGAGDGDIK--------------------SPV--KCLAIDPHEEFF 137 (213)
Q Consensus 82 wd~~~~~~~-~~~~~-~~~~i~~~~~~~~~~~l~~~~~~~~i~--------------------~~v--~~~~~~~~~~~l 137 (213)
||+++++.+ ..+.. |..+|.+++|+|++.+|++++.+ .++ ..+ .+++|+|++++|
T Consensus 197 wd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l 275 (343)
T 3lrv_A 197 YNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQ-TVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNM 275 (343)
T ss_dssp EESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESS-BEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEE
T ss_pred EECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCC-eEEEEEcCCCCcceeecccccccccccceEEEECCCCCEE
Confidence 999999877 77887 89999999999999999999954 665 111 259999999999
Q ss_pred EEecC-CCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCC---C-CeEEEEecCCcEEEEeCCCC
Q psy7433 138 VTGAG-DGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG---G-SRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 138 ~~~~~-dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~-~~l~s~~~d~~i~iw~~~~~ 205 (213)
++++. |+.+++|++.+....... .++..+.|.+ + ..+++++.|+.++++-....
T Consensus 276 ~~~s~~d~~i~v~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~ 334 (343)
T 3lrv_A 276 IAYSNESNSLTIYKFDKKTKNWTK--------------DEESALCLQSDTADFTDMDVVCGDGGIAAILKTND 334 (343)
T ss_dssp EEEETTTTEEEEEEECTTTCSEEE--------------EEEEECCC----CCCCEEEEEEETTEEEEEEECSS
T ss_pred EEecCCCCcEEEEEEcccccceEe--------------cCceeEecCccccccceeEEEecCCceEEEEecCC
Confidence 99988 999999999654332222 2466777776 3 35888889999888765544
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2.3e-26 Score=170.57 Aligned_cols=180 Identities=16% Similarity=0.174 Sum_probs=152.4
Q ss_pred cccc--ccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCccc---------ccceeeeeeecCCceEEEEecCCCEE
Q psy7433 2 TYQC--HNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQK---------KALVQAFVCHDQGASSLVFAPQHQLL 70 (213)
Q Consensus 2 ~l~~--h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~l 70 (213)
++.+ |...|.+++|+| +++|+++ +.|+.|++||+ .. .+.+..+. |...+.+++|+|++ +
T Consensus 94 ~~~~~~~~~~v~~l~~~~-~~~l~s~---~~d~~i~iwd~---~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l 163 (342)
T 1yfq_A 94 ALTNNEANLGICRICKYG-DDKLIAA---SWDGLIEVIDP---RNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--L 163 (342)
T ss_dssp ECBSCCCCSCEEEEEEET-TTEEEEE---ETTSEEEEECH---HHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--E
T ss_pred eccccCCCCceEEEEeCC-CCEEEEE---cCCCeEEEEcc---cccccccccccCCeeeEEe-eCCceEEEEecCCc--E
Confidence 3566 999999999999 9999999 68999999998 34 55555555 88899999999887 9
Q ss_pred EEEcCCCcEEEEeccC-ce--EEEecccCCCCeeEEEecC-CCCEEEEecCCCcee------e-----------------
Q psy7433 71 ISAGKKGDICVIDLRQ-RV--IRSRFNAHESPVKCLAIDP-HEEFFVTGAGDGDIK------S----------------- 123 (213)
Q Consensus 71 ~~~~~d~~v~iwd~~~-~~--~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~i~------~----------------- 123 (213)
++++.|+.|++||+++ +. .......+...+.+++|+| +++.+++++.++.++ .
T Consensus 164 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~ 243 (342)
T 1yfq_A 164 IVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRL 243 (342)
T ss_dssp EEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCC
T ss_pred EEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccc
Confidence 9999999999999988 43 3334445788999999999 999999999998664 1
Q ss_pred ---------ceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCC-CCceeEEEecCCCeEEEEeCCCCeEEEEec
Q psy7433 124 ---------PVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGE-HARSSFFKHIGQGVTQLHVDGGSRLFSCGA 193 (213)
Q Consensus 124 ---------~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~ 193 (213)
.|.+++|+|++++|++++.||.|++||+++++.+..+..| . ..|.+++ ..+.+|++++.
T Consensus 244 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~----------~~v~~~~-~~~~~l~s~s~ 312 (342)
T 1yfq_A 244 NLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNE----------DSVVKIA-CSDNILCLATS 312 (342)
T ss_dssp CTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSS----------SEEEEEE-ECSSEEEEEEE
T ss_pred cccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccC----------CCceEec-CCCCeEEEEec
Confidence 8999999999999999999999999999999999999887 5 6899999 33457999999
Q ss_pred CCc-EEEEeC
Q psy7433 194 DGS-MKVRQL 202 (213)
Q Consensus 194 d~~-i~iw~~ 202 (213)
||. .+.|..
T Consensus 313 Dg~~~~~~~~ 322 (342)
T 1yfq_A 313 DDTFKTNAAI 322 (342)
T ss_dssp CTHHHHCSSS
T ss_pred CCcccccccc
Confidence 998 555553
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-24 Score=164.51 Aligned_cols=186 Identities=14% Similarity=0.177 Sum_probs=149.7
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEE-EEcCCCcEEE
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLI-SAGKKGDICV 81 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~v~i 81 (213)
+.+| ..+.+++|+|++++++.++ +.++.|++||+ .+++.+..+..+. .+.+++|+|++++|+ +++.++.|++
T Consensus 28 ~~~~-~~~~~~~~s~dg~~l~~~~--~~d~~i~v~d~---~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v 100 (391)
T 1l0q_A 28 IPVG-SNPMGAVISPDGTKVYVAN--AHSNDVSIIDT---ATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSV 100 (391)
T ss_dssp EECS-SSEEEEEECTTSSEEEEEE--GGGTEEEEEET---TTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred eecC-CCcceEEECCCCCEEEEEC--CCCCeEEEEEC---CCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEE
Confidence 3444 4589999999999874433 58999999998 4566666666444 899999999999775 5556799999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEE-EEecCCCcee----------------eceEEEEEccCCceE-EEecCC
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFF-VTGAGDGDIK----------------SPVKCLAIDPHEEFF-VTGAGD 143 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~~~~i~----------------~~v~~~~~~~~~~~l-~~~~~d 143 (213)
||+.+++.+..+.. ...+.+++|+|+++.+ ++++.++.+. ..+.+++|+|+++++ ++++.+
T Consensus 101 ~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~ 179 (391)
T 1l0q_A 101 IDTTSNTVAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDS 179 (391)
T ss_dssp EETTTTEEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTT
T ss_pred EECCCCeEEEEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCC
Confidence 99999988877764 4578999999999977 6777788776 567899999999877 677889
Q ss_pred CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEe---cCCcEEEEeCCCCcc
Q psy7433 144 GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCG---ADGSMKVRQLPDRDA 207 (213)
Q Consensus 144 g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~---~d~~i~iw~~~~~~~ 207 (213)
+.|++||+++++....+..+ ..+.+++|+|++ +|++++ .++.|++||+.+++.
T Consensus 180 ~~v~~~d~~~~~~~~~~~~~-----------~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~ 236 (391)
T 1l0q_A 180 MSISVIDTVTNSVIDTVKVE-----------AAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKI 236 (391)
T ss_dssp TEEEEEETTTTEEEEEEECS-----------SEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEE
T ss_pred CEEEEEECCCCeEEEEEecC-----------CCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeE
Confidence 99999999998888777643 568999999965 577666 689999999987643
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-24 Score=164.11 Aligned_cols=182 Identities=10% Similarity=0.136 Sum_probs=150.6
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEE-EEEcCCCcEEEEeccC
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLL-ISAGKKGDICVIDLRQ 86 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~v~iwd~~~ 86 (213)
..+.+++|+|++++|+.++ +.++.|++||+ ...+.+..+.. ...+.+++|+|+++.| ++++.++.|++||+++
T Consensus 74 ~~v~~~~~spdg~~l~~~~--~~~~~v~v~d~---~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~ 147 (391)
T 1l0q_A 74 SSPQGVAVSPDGKQVYVTN--MASSTLSVIDT---TSNTVAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVT 147 (391)
T ss_dssp SSEEEEEECTTSSEEEEEE--TTTTEEEEEET---TTTEEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred CCccceEECCCCCEEEEEE--CCCCEEEEEEC---CCCeEEEEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 4899999999999886664 57899999998 45555555553 4568999999999977 6888899999999999
Q ss_pred ceEEEecccCCCCeeEEEecCCCCEE-EEecCCCcee----------------eceEEEEEccCCceEEEec---CCCcE
Q psy7433 87 RVIRSRFNAHESPVKCLAIDPHEEFF-VTGAGDGDIK----------------SPVKCLAIDPHEEFFVTGA---GDGDI 146 (213)
Q Consensus 87 ~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~~~~i~----------------~~v~~~~~~~~~~~l~~~~---~dg~i 146 (213)
++.+..+..+ ..+.+++|+|+++.+ ++++.++.+. ..+.+++|+|+++++++++ .++.|
T Consensus 148 ~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v 226 (391)
T 1l0q_A 148 KAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTV 226 (391)
T ss_dssp TEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEE
T ss_pred CcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcE
Confidence 9888877754 557999999999887 5667777765 5678999999999888887 68999
Q ss_pred EEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eE-EEEecCCcEEEEeCCCCcc
Q psy7433 147 KVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RL-FSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 147 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l-~s~~~d~~i~iw~~~~~~~ 207 (213)
++||+++++.+..+..+ ..+.+++|+|++ ++ ++++.|+.|++||+.+++.
T Consensus 227 ~~~d~~~~~~~~~~~~~-----------~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~ 278 (391)
T 1l0q_A 227 SMIDTGTNKITARIPVG-----------PDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTI 278 (391)
T ss_dssp EEEETTTTEEEEEEECC-----------SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred EEEECCCCeEEEEEecC-----------CCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcE
Confidence 99999999988888775 357899999976 45 6778899999999987643
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=99.94 E-value=8.7e-26 Score=167.21 Aligned_cols=155 Identities=19% Similarity=0.325 Sum_probs=131.2
Q ss_pred ccccccCceEEEEEeC--CCCeEEEeeccCCCccEEEEeCCCccc------ccceeeeeeecCCceEEEEecC--CCEEE
Q psy7433 2 TYQCHNKITSDFVFLG--SCSLVATAGHSSESKNVCLWDSLLPQK------KALVQAFVCHDQGASSLVFAPQ--HQLLI 71 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~--~~~~l~~~g~~s~~~~i~iwd~~~~~~------~~~~~~~~~~~~~v~~~~~~~~--~~~l~ 71 (213)
++++|...|.+++|+| ++++|+++ +.|+.|++||++.... .+.+..+..|...|.+++|+|+ +++|+
T Consensus 52 ~~~~~~~~v~~~~~~~~~d~~~l~s~---~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~ 128 (351)
T 3f3f_A 52 SWRAHDSSIVAIDWASPEYGRIIASA---SYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLA 128 (351)
T ss_dssp EEECCSSCEEEEEECCGGGCSEEEEE---ETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEE
T ss_pred eeccCCCcEEEEEEcCCCCCCEEEEE---cCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEE
Confidence 3578999999999999 69999999 6899999999953211 1456777789999999999999 99999
Q ss_pred EEcCCCcEEEEeccCce------------------------------------------------------------EEE
Q psy7433 72 SAGKKGDICVIDLRQRV------------------------------------------------------------IRS 91 (213)
Q Consensus 72 ~~~~d~~v~iwd~~~~~------------------------------------------------------------~~~ 91 (213)
+++.|+.|++||+++++ .+.
T Consensus 129 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 208 (351)
T 3f3f_A 129 CLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAA 208 (351)
T ss_dssp EEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEE
T ss_pred EecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeee
Confidence 99999999999986542 144
Q ss_pred ecccCCCCeeEEEecCCC----CEEEEecCCCcee---------------------------------------------
Q psy7433 92 RFNAHESPVKCLAIDPHE----EFFVTGAGDGDIK--------------------------------------------- 122 (213)
Q Consensus 92 ~~~~~~~~i~~~~~~~~~----~~l~~~~~~~~i~--------------------------------------------- 122 (213)
.+.+|...|.+++|+|++ ++|++++.|+.++
T Consensus 209 ~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (351)
T 3f3f_A 209 KLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKA 288 (351)
T ss_dssp ECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC-------------------------------------
T ss_pred ecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceee
Confidence 456688899999999998 8999999999775
Q ss_pred ------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeee
Q psy7433 123 ------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYN 159 (213)
Q Consensus 123 ------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~ 159 (213)
..|.+++|+|++++|++++.||.|++||+.+++....
T Consensus 289 ~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~ 343 (351)
T 3f3f_A 289 ELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKC 343 (351)
T ss_dssp --CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEE
T ss_pred eecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhh
Confidence 3689999999999999999999999999987654433
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-24 Score=166.33 Aligned_cols=187 Identities=14% Similarity=0.175 Sum_probs=155.8
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEE-EEcCCCcEEE
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLI-SAGKKGDICV 81 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~v~i 81 (213)
+.+|.+.|.+++|+|++++++++ +.++.|++||+ ...+.+..+..|...+.+++|+|++++++ +++.++.|++
T Consensus 165 ~~~~~~~v~~~~~~~~~~~~~s~---~~d~~v~~~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~ 238 (433)
T 3bws_A 165 YKKKLGFVETISIPEHNELWVSQ---MQANAVHVFDL---KTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISV 238 (433)
T ss_dssp HHTTCCEEEEEEEGGGTEEEEEE---GGGTEEEEEET---TTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred ccccCCceeEEEEcCCCEEEEEE---CCCCEEEEEEC---CCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEE
Confidence 45788999999999999999999 68999999998 45667777778888999999999998875 5558999999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEec--------CCCcee----------------eceEEEEEccCCc-e
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGA--------GDGDIK----------------SPVKCLAIDPHEE-F 136 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--------~~~~i~----------------~~v~~~~~~~~~~-~ 136 (213)
||+++++.+..+.. ...+.+++|+|+++.+++++ .|+.++ ..+.+++|+|+++ +
T Consensus 239 ~d~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l 317 (433)
T 3bws_A 239 IDRKTKLEIRKTDK-IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKI 317 (433)
T ss_dssp EETTTTEEEEECCC-CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEE
T ss_pred EECCCCcEEEEecC-CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEE
Confidence 99999988888765 45689999999999998887 355554 5678899999997 4
Q ss_pred EEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEec---------------CCcEEEE
Q psy7433 137 FVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGA---------------DGSMKVR 200 (213)
Q Consensus 137 l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~---------------d~~i~iw 200 (213)
+++++.++.|++||+++++....+... ..+.+++|+|++ ++++++. ||.|++|
T Consensus 318 ~~~~~~~~~v~v~d~~~~~~~~~~~~~-----------~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~ 386 (433)
T 3bws_A 318 YVSDMCCSKIEVYDLKEKKVQKSIPVF-----------DKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVI 386 (433)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECS-----------SSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEE
T ss_pred EEEecCCCEEEEEECCCCcEEEEecCC-----------CCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEE
Confidence 566789999999999998888777632 578999999976 4666665 5799999
Q ss_pred eCCCCcc
Q psy7433 201 QLPDRDA 207 (213)
Q Consensus 201 ~~~~~~~ 207 (213)
|+.+++.
T Consensus 387 d~~~~~~ 393 (433)
T 3bws_A 387 DTTTDTV 393 (433)
T ss_dssp ETTTTEE
T ss_pred ECCCCcE
Confidence 9987653
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.6e-25 Score=164.74 Aligned_cols=119 Identities=18% Similarity=0.281 Sum_probs=104.3
Q ss_pred ccccceeeeeeecCCceEEEEecC---CCEEEEEcCCCcEEEEeccC-ceEE-EecccCCCCeeEEEecCCCCEEEEecC
Q psy7433 43 QKKALVQAFVCHDQGASSLVFAPQ---HQLLISAGKKGDICVIDLRQ-RVIR-SRFNAHESPVKCLAIDPHEEFFVTGAG 117 (213)
Q Consensus 43 ~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~v~iwd~~~-~~~~-~~~~~~~~~i~~~~~~~~~~~l~~~~~ 117 (213)
...+.+..+.+|...|++++|+|+ +++|++++.||.|++||+++ +..+ ..+..|...|.+++|+|++++|++++.
T Consensus 27 ~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 106 (368)
T 3mmy_A 27 NPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASC 106 (368)
T ss_dssp CTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEET
T ss_pred CCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcC
Confidence 455667778899999999999998 69999999999999999987 5444 677889999999999999999999999
Q ss_pred CCcee----------------eceEEEEE--ccCCceEEEecCCCcEEEEEccCCeeeeeec
Q psy7433 118 DGDIK----------------SPVKCLAI--DPHEEFFVTGAGDGDIKVWSLSGNHLLYNFP 161 (213)
Q Consensus 118 ~~~i~----------------~~v~~~~~--~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~ 161 (213)
|+.++ ..|.+++| +|++++|++++.||.|++||+++++.+..+.
T Consensus 107 dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 168 (368)
T 3mmy_A 107 DKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQ 168 (368)
T ss_dssp TSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEE
T ss_pred CCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEe
Confidence 99886 78999999 8999999999999999999998776554443
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=99.94 E-value=2.6e-24 Score=160.96 Aligned_cols=194 Identities=16% Similarity=0.167 Sum_probs=141.4
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCC--------------------
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQH-------------------- 67 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-------------------- 67 (213)
..+..+++.++++.++..| +.++.|++||. .+++.+..+. +...|.+++|+++.
T Consensus 59 ~~~~~~~~~~~~~~~~~~~--~~d~~v~iWd~---~~~~~~~~~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~ 132 (355)
T 3vu4_A 59 RHLSKVRMLHRTNYVAFVT--GVKEVVHIWDD---VKKQDVSRIK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKR 132 (355)
T ss_dssp SCCCEEEECTTSSEEEEEC--SSTTEEEEEET---TTTEEEEEEE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCB
T ss_pred CCeEEEEEcCCCCEEEEEE--CCccEEEEEEC---CCCcEEEEEE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCcee
Confidence 3577889999888886554 57889999998 4555665554 55677777776542
Q ss_pred ---------------CEEEE--EcCCCcEEEEeccCce---------------E-EEecccCCCCeeEEEecCCCCEEEE
Q psy7433 68 ---------------QLLIS--AGKKGDICVIDLRQRV---------------I-RSRFNAHESPVKCLAIDPHEEFFVT 114 (213)
Q Consensus 68 ---------------~~l~~--~~~d~~v~iwd~~~~~---------------~-~~~~~~~~~~i~~~~~~~~~~~l~~ 114 (213)
.+++. |+.||.|++||+++++ + +..+.+|...|.+++|+|++++|++
T Consensus 133 ~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s 212 (355)
T 3vu4_A 133 ITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVAT 212 (355)
T ss_dssp SSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEE
T ss_pred eEEeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEE
Confidence 23443 5788999999998765 2 6678889999999999999999999
Q ss_pred ecCCCc-ee-------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCee--eeeecC--------CC
Q psy7433 115 GAGDGD-IK-------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHL--LYNFPG--------EH 164 (213)
Q Consensus 115 ~~~~~~-i~-------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~--~~~~~~--------~~ 164 (213)
++.|+. ++ ..|.+++|+|++++|++++.|+.|++||++.... ...+.. ..
T Consensus 213 ~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (355)
T 3vu4_A 213 CSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSE 292 (355)
T ss_dssp EETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCS
T ss_pred EeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccc
Confidence 999998 76 4689999999999999999999999999975431 111111 00
Q ss_pred CceeEEE---ecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCcc
Q psy7433 165 ARSSFFK---HIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 165 ~~~~~~~---~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~ 207 (213)
.....+. ........++|++++ .+++++.||.+++|++..+..
T Consensus 293 ~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~~ 339 (355)
T 3vu4_A 293 WSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDDE 339 (355)
T ss_dssp SCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEETT
T ss_pred cceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCCC
Confidence 0000000 011234678999976 689999999999999876543
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-23 Score=160.63 Aligned_cols=184 Identities=12% Similarity=0.105 Sum_probs=144.7
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCC---ccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEE-EEcCCC
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSES---KNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLI-SAGKKG 77 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~---~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~ 77 (213)
.+.+|...|.+++|+|+|+.|++++ .+ ..|++||++ +++. ..+..+...+.+++|+|+|++|+ +++.++
T Consensus 173 ~l~~~~~~v~~~~~Spdg~~la~~s---~~~~~~~i~~~d~~---tg~~-~~l~~~~~~~~~~~~spdg~~la~~~~~~g 245 (415)
T 2hqs_A 173 VVHRSPQPLMSPAWSPDGSKLAYVT---FESGRSALVIQTLA---NGAV-RQVASFPRHNGAPAFSPDGSKLAFALSKTG 245 (415)
T ss_dssp EEEEESSCEEEEEECTTSSEEEEEE---CTTSSCEEEEEETT---TCCE-EEEECCSSCEEEEEECTTSSEEEEEECTTS
T ss_pred EEeCCCCcceeeEEcCCCCEEEEEE---ecCCCcEEEEEECC---CCcE-EEeecCCCcccCEEEcCCCCEEEEEEecCC
Confidence 4567899999999999999999984 45 499999994 3333 34566778899999999999887 666655
Q ss_pred c--EEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecC-CC--cee----------------eceEEEEEccCCce
Q psy7433 78 D--ICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAG-DG--DIK----------------SPVKCLAIDPHEEF 136 (213)
Q Consensus 78 ~--v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-~~--~i~----------------~~v~~~~~~~~~~~ 136 (213)
. |++||+++++. ..+..+...+.+++|+|+++.|++++. ++ .+. ..+.+++|+|+|++
T Consensus 246 ~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~ 324 (415)
T 2hqs_A 246 SLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKF 324 (415)
T ss_dssp SCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSE
T ss_pred CceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCCE
Confidence 4 99999998875 456677888999999999999888876 34 232 45778999999999
Q ss_pred EEEecCC---CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEecCC---cEEEEeCCCC
Q psy7433 137 FVTGAGD---GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGADG---SMKVRQLPDR 205 (213)
Q Consensus 137 l~~~~~d---g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~d~---~i~iw~~~~~ 205 (213)
|+.++.+ ..|.+||+.+++.. .+..+ ..+.+++|+|++. |++++.++ .|++||+..+
T Consensus 325 l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~-----------~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~ 388 (415)
T 2hqs_A 325 MVMVSSNGGQQHIAKQDLATGGVQ-VLSST-----------FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGR 388 (415)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEE-ECCCS-----------SSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSC
T ss_pred EEEEECcCCceEEEEEECCCCCEE-EecCC-----------CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCC
Confidence 9888764 58999999887663 34332 3688999999764 77777766 7999998754
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.4e-24 Score=165.96 Aligned_cols=183 Identities=13% Similarity=0.164 Sum_probs=150.4
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCccccccee-----eeeeecCCceEEEEecCCCEEEEEcCCCcEEEE
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQ-----AFVCHDQGASSLVFAPQHQLLISAGKKGDICVI 82 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iw 82 (213)
..+.+++|+|++.+++++ +.++.|++||++ +++... .+.+|...+.+++|+++++++++++.|+.|++|
T Consensus 123 ~~~~~~~~s~~~~~~~~~---~~~~~i~~~d~~---~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~ 196 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPL---LEDEGMDVLDIN---SGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVF 196 (433)
T ss_dssp SCBCCCEESSSSEEEEEB---TTSSSEEEEETT---TCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEE
T ss_pred CCceEEEEeCCCeEEEEe---CCCCeEEEEECC---CCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEE
Confidence 446689999977777777 688999999984 444444 334677789999999999999999999999999
Q ss_pred eccCceEEEecccCCCCeeEEEecCCCCEEE-EecCCCcee----------------eceEEEEEccCCceEEEec----
Q psy7433 83 DLRQRVIRSRFNAHESPVKCLAIDPHEEFFV-TGAGDGDIK----------------SPVKCLAIDPHEEFFVTGA---- 141 (213)
Q Consensus 83 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~~~~i~----------------~~v~~~~~~~~~~~l~~~~---- 141 (213)
|+++++.+..+..+...+.+++|+|+++.++ +++.++.+. ..+.+++|+|+++++++++
T Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~ 276 (433)
T 3bws_A 197 DLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSAS 276 (433)
T ss_dssp ETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESC
T ss_pred ECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCC
Confidence 9999998888888888999999999999875 444778775 5688999999999988887
Q ss_pred ----CCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-e-EEEEecCCcEEEEeCCCCcc
Q psy7433 142 ----GDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-R-LFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 142 ----~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~-l~s~~~d~~i~iw~~~~~~~ 207 (213)
.|+.|++||+++++....+... ..+.+++|+|++ . +++++.|+.|++||+.+++.
T Consensus 277 ~~~~~dg~i~~~d~~~~~~~~~~~~~-----------~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~ 337 (433)
T 3bws_A 277 NQESGGGRLGIYSMDKEKLIDTIGPP-----------GNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKV 337 (433)
T ss_dssp TTCSCCEEEEEEETTTTEEEEEEEEE-----------ECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEE
T ss_pred ccccCCCeEEEEECCCCcEEeeccCC-----------CCcceEEECCCCCEEEEEecCCCEEEEEECCCCcE
Confidence 5889999999988776665321 468899999976 4 56778999999999987643
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-23 Score=161.43 Aligned_cols=168 Identities=11% Similarity=0.102 Sum_probs=121.2
Q ss_pred ccCceEEEEEeCCCCeEE----EeeccCCCccEEEEeCCCcc-----ccc---ceeeeeeecCCceEEEEecC-CCEEEE
Q psy7433 6 HNKITSDFVFLGSCSLVA----TAGHSSESKNVCLWDSLLPQ-----KKA---LVQAFVCHDQGASSLVFAPQ-HQLLIS 72 (213)
Q Consensus 6 h~~~v~~~~~~~~~~~l~----~~g~~s~~~~i~iwd~~~~~-----~~~---~~~~~~~~~~~v~~~~~~~~-~~~l~~ 72 (213)
|...|.+++|+|++++|+ ++ +.|+.|++||++... ..+ .+..+.+|...|.+++|+|+ +++|++
T Consensus 91 ~~~~v~~l~~spdg~~lav~~~sg---s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las 167 (434)
T 2oit_A 91 MKFPIHHLALSCDNLTLSACMMSS---EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAV 167 (434)
T ss_dssp CSSCEEEEEECTTSCEEEEEEEET---TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEE
T ss_pred CCCcccEEEEcCCCCEEEEEEecc---CCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEE
Confidence 456799999999999999 66 789999999984220 001 24455678999999999997 789999
Q ss_pred EcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCceeeceEEEEEccCCceEEEecCCCcEEEEEcc
Q psy7433 73 AGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLS 152 (213)
Q Consensus 73 ~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~ 152 (213)
++.||.|++||++++........|... +.+++|+|+|++|++|+.||.|++||++
T Consensus 168 ~s~Dg~v~iwD~~~~~~~~~~~~~~~~-------------------------v~~v~wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 168 CLADGSIAVLQVTETVKVCATLPSTVA-------------------------VTSVCWSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp EETTSCEEEEEESSSEEEEEEECGGGC-------------------------EEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred EECCCeEEEEEcCCCcceeeccCCCCc-------------------------eeEEEEcCCCCEEEEEcCCCcEEEEccC
Confidence 999999999999987554433333333 4556666677899999999999999998
Q ss_pred CCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEE--EEecCC------cEEEEeCCCC
Q psy7433 153 GNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLF--SCGADG------SMKVRQLPDR 205 (213)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~--s~~~d~------~i~iw~~~~~ 205 (213)
++....+..+.... ..+...|.++.|+++..++ ....|| .+++|++.+.
T Consensus 223 -~~~~~~~~~~~~~~---~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 223 -LQEKKVIPCPPFYE---SDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp -CCEEEEECCCTTCC---TTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred -CcccccccCCcccC---CCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 55555554432110 0011379999999876643 233443 3899999865
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.9e-23 Score=152.57 Aligned_cols=140 Identities=11% Similarity=0.133 Sum_probs=106.0
Q ss_pred ccccCceEEEEEeC---CCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeec---CCceEEEEecCCCEE-------
Q psy7433 4 QCHNKITSDFVFLG---SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHD---QGASSLVFAPQHQLL------- 70 (213)
Q Consensus 4 ~~h~~~v~~~~~~~---~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l------- 70 (213)
.+|...++.++|+| ++.+||++ +.|++|+|||+ .++++++++.+|. ..+.+++|+|++.++
T Consensus 175 ~~~~~~v~~l~fs~~~g~~~~LaSg---S~D~TIkIWDl---~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~ 248 (356)
T 2w18_A 175 FLMPPEETILTFAEVQGMQEALLGT---TIMNNIVIWNL---KTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPC 248 (356)
T ss_dssp EECCCSSCEEEEEEEETSTTEEEEE---ETTSEEEEEET---TTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC---
T ss_pred ccCCCceeeEEeeccCCCCceEEEe---cCCCcEEEEEC---CCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCC
Confidence 35555666666666 55778888 79999999999 6778888887654 357788999999876
Q ss_pred -----EEEcCCCcEEEEeccCceEEEec-----ccCCCCeeEEEecCCCCEEEEecCCCcee-----------------e
Q psy7433 71 -----ISAGKKGDICVIDLRQRVIRSRF-----NAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------S 123 (213)
Q Consensus 71 -----~~~~~d~~v~iwd~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~ 123 (213)
++|+.|++|++||..+++.+..+ .+|...+.+..++ +..+++++.|++++ .
T Consensus 249 ~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~ 326 (356)
T 2w18_A 249 AKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTALLPPVSD 326 (356)
T ss_dssp ---------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEEEEECCC--
T ss_pred CcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcEEEEecCCCC
Confidence 56788999999999999877654 2454444433333 77899999999987 2
Q ss_pred -ceEEEEEccCCceEEEecCCCcEEEEEc
Q psy7433 124 -PVKCLAIDPHEEFFVTGAGDGDIKVWSL 151 (213)
Q Consensus 124 -~v~~~~~~~~~~~l~~~~~dg~i~v~d~ 151 (213)
.+.+++|+|+|++|++|+.|++|+|||+
T Consensus 327 ~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 327 QHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 2446899999999999999999999996
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.90 E-value=6.5e-22 Score=143.33 Aligned_cols=186 Identities=8% Similarity=0.056 Sum_probs=137.0
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCccc-ccceeeeeee-cCCceEEEEecCCCEEEEEc--CCCc
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQK-KALVQAFVCH-DQGASSLVFAPQHQLLISAG--KKGD 78 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~-~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~--~d~~ 78 (213)
+..|...|.+++|+|++++|+++ .++.|++||++ . .+.......+ ...+.+++|+|++++|++++ .++.
T Consensus 37 ~~~~~~~v~~~~~spdg~~l~~~----~~~~i~~~d~~---~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~ 109 (297)
T 2ojh_A 37 VWQTPELFEAPNWSPDGKYLLLN----SEGLLYRLSLA---GDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGK 109 (297)
T ss_dssp EEEESSCCEEEEECTTSSEEEEE----ETTEEEEEESS---SCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSS
T ss_pred eccCCcceEeeEECCCCCEEEEE----cCCeEEEEeCC---CCCCceEeccccccccccceEECCCCCEEEEEEeCCCCc
Confidence 45688899999999999999998 47899999984 3 3344433334 36788999999999999988 3345
Q ss_pred EEEEec--cCceEEEecccCCCCeeEEEecCCCCEEE-EecCCCcee------------------eceEEEEEccCCceE
Q psy7433 79 ICVIDL--RQRVIRSRFNAHESPVKCLAIDPHEEFFV-TGAGDGDIK------------------SPVKCLAIDPHEEFF 137 (213)
Q Consensus 79 v~iwd~--~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~~~~i~------------------~~v~~~~~~~~~~~l 137 (213)
..+|.+ .+++ ...+.. ...+..++|+|+++.++ ++..++.+. ..+.+++|+|+++++
T Consensus 110 ~~l~~~~~~~~~-~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l 187 (297)
T 2ojh_A 110 SAIYLLPSTGGT-PRLMTK-NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWI 187 (297)
T ss_dssp CEEEEEETTCCC-CEECCS-SSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEE
T ss_pred ceEEEEECCCCc-eEEeec-CCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEE
Confidence 555554 4444 334443 33488999999999877 566666443 568899999999987
Q ss_pred EEec-CCCcEEEEEcc-CCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecC-----------CcEEEEeCC
Q psy7433 138 VTGA-GDGDIKVWSLS-GNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGAD-----------GSMKVRQLP 203 (213)
Q Consensus 138 ~~~~-~dg~i~v~d~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d-----------~~i~iw~~~ 203 (213)
+.++ .++.+++|++. .+.....+..+. ..+..+.|+|++ +|++++.+ +.|++||+.
T Consensus 188 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~----------~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~ 257 (297)
T 2ojh_A 188 YFNSSRTGQMQIWRVRVDGSSVERITDSA----------YGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMD 257 (297)
T ss_dssp EEEECTTSSCEEEEEETTSSCEEECCCCS----------EEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETT
T ss_pred EEEecCCCCccEEEECCCCCCcEEEecCC----------cccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecC
Confidence 7665 58899999986 455555565543 568899999976 46666655 569999998
Q ss_pred CCcc
Q psy7433 204 DRDA 207 (213)
Q Consensus 204 ~~~~ 207 (213)
+++.
T Consensus 258 ~~~~ 261 (297)
T 2ojh_A 258 GGNV 261 (297)
T ss_dssp SCSC
T ss_pred CCCc
Confidence 7643
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.89 E-value=5.3e-22 Score=151.38 Aligned_cols=189 Identities=10% Similarity=0.045 Sum_probs=139.2
Q ss_pred cccccCceEEEEEeC--------------CCCeEEEeeccCCC---ccEEEEeCCCcccccceeeeeeecCCceEEEEec
Q psy7433 3 YQCHNKITSDFVFLG--------------SCSLVATAGHSSES---KNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP 65 (213)
Q Consensus 3 l~~h~~~v~~~~~~~--------------~~~~l~~~g~~s~~---~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 65 (213)
+.+|...++.+++++ .+..++.++....+ +.|++||++ ....+.+..|...+.+++|+|
T Consensus 113 ~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~----g~~~~~l~~~~~~v~~~~~Sp 188 (415)
T 2hqs_A 113 YKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYD----GYNQFVVHRSPQPLMSPAWSP 188 (415)
T ss_dssp EEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETT----SCSCEEEEEESSCEEEEEECT
T ss_pred EEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCC----CCCCEEEeCCCCcceeeEEcC
Confidence 455666666665554 15566655321112 799999983 345667778999999999999
Q ss_pred CCCEEEEEcCCC---cEEEEeccCceEEEecccCCCCeeEEEecCCCCEEE-EecCCCc--ee----------------e
Q psy7433 66 QHQLLISAGKKG---DICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFV-TGAGDGD--IK----------------S 123 (213)
Q Consensus 66 ~~~~l~~~~~d~---~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~~~~--i~----------------~ 123 (213)
+|++|++++.++ .|++||+++++.. .+..+...+.+++|+|+++.|+ +++.++. +. .
T Consensus 189 dg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~ 267 (415)
T 2hqs_A 189 DGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRS 267 (415)
T ss_dssp TSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSS
T ss_pred CCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCC
Confidence 999999998875 9999999998765 4556778899999999999888 5665554 33 5
Q ss_pred ceEEEEEccCCceEEEecC-CC--cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecC---Cc
Q psy7433 124 PVKCLAIDPHEEFFVTGAG-DG--DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGAD---GS 196 (213)
Q Consensus 124 ~v~~~~~~~~~~~l~~~~~-dg--~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d---~~ 196 (213)
.+.+++|+|+|++|+.++. ++ .|.+||+.+++.. .+..+. ..+.+++|+|++ +|++++.+ ..
T Consensus 268 ~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~-~l~~~~----------~~~~~~~~spdG~~l~~~~~~~g~~~ 336 (415)
T 2hqs_A 268 NNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQ-RITWEG----------SQNQDADVSSDGKFMVMVSSNGGQQH 336 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCE-ECCCSS----------SEEEEEEECTTSSEEEEEEECSSCEE
T ss_pred cccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEE-EEecCC----------CcccCeEECCCCCEEEEEECcCCceE
Confidence 6889999999998888776 44 6777788776533 333332 568899999976 46666654 58
Q ss_pred EEEEeCCCCcc
Q psy7433 197 MKVRQLPDRDA 207 (213)
Q Consensus 197 i~iw~~~~~~~ 207 (213)
|++||+.+++.
T Consensus 337 i~~~d~~~~~~ 347 (415)
T 2hqs_A 337 IAKQDLATGGV 347 (415)
T ss_dssp EEEEETTTCCE
T ss_pred EEEEECCCCCE
Confidence 99999987653
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.88 E-value=2.4e-21 Score=148.45 Aligned_cols=158 Identities=13% Similarity=0.063 Sum_probs=115.9
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCccc-----c--ccee-----eeeeecCCceEEEEecCCCEEE---
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQK-----K--ALVQ-----AFVCHDQGASSLVFAPQHQLLI--- 71 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~-----~--~~~~-----~~~~~~~~v~~~~~~~~~~~l~--- 71 (213)
...++.+++++++.+++++ +.++ +++|+...... . ..+. ....+...|.+++|+|++++|+
T Consensus 36 ~~~~n~lavs~~~~~l~~~---~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~ 111 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAG---GASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACM 111 (434)
T ss_dssp CSCCBCEEEETTTTEEEEE---ETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEE
T ss_pred CCCccEEEEecCCCEEEEE---CCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEE
Confidence 3468899999999999998 4566 89987521000 0 0111 1112456799999999999999
Q ss_pred -EEcCCCcEEEEeccCce--------E---EEecccCCCCeeEEEecCCCCEEEEecCCCceeeceEEEEEccC-CceEE
Q psy7433 72 -SAGKKGDICVIDLRQRV--------I---RSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPH-EEFFV 138 (213)
Q Consensus 72 -~~~~d~~v~iwd~~~~~--------~---~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~-~~~l~ 138 (213)
+++.|+.|++||++++. . ...+.+|.. .|.+++|+|+ +.+|+
T Consensus 112 ~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~-------------------------~V~~v~~~p~~~~~la 166 (434)
T 2oit_A 112 MSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGG-------------------------MVIDMKWNPTVPSMVA 166 (434)
T ss_dssp EETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGG-------------------------SEEEEEECSSCTTEEE
T ss_pred eccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCC-------------------------ceEEEEECCCCCCEEE
Confidence 78899999999997651 1 122222333 4555666665 67899
Q ss_pred EecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCC
Q psy7433 139 TGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLP 203 (213)
Q Consensus 139 ~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~ 203 (213)
+++.||.|++||++++........|. ..|.+++|+|++ +|++++.||.|++||++
T Consensus 167 s~s~Dg~v~iwD~~~~~~~~~~~~~~----------~~v~~v~wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 167 VCLADGSIAVLQVTETVKVCATLPST----------VAVTSVCWSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp EEETTSCEEEEEESSSEEEEEEECGG----------GCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred EEECCCeEEEEEcCCCcceeeccCCC----------CceeEEEEcCCCCEEEEEcCCCcEEEEccC
Confidence 99999999999999887665555544 689999999965 69999999999999998
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.87 E-value=5.3e-20 Score=135.94 Aligned_cols=185 Identities=9% Similarity=0.076 Sum_probs=137.9
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccc-eeeeeeecCCceEEEEecCCCEEEEEcCCC---cEE
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKAL-VQAFVCHDQGASSLVFAPQHQLLISAGKKG---DIC 80 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---~v~ 80 (213)
.+...+ .++|+|+++++++++ ..++.|.+||.. ..+. ...+..+..+..+++|+|++++++++..++ .|.
T Consensus 38 ~~~~~~-~~~~s~dg~~l~~~~--~~~~~i~~~d~~---~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~ 111 (331)
T 3u4y_A 38 LGYDFV-DTAITSDCSNVVVTS--DFCQTLVQIETQ---LEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQ 111 (331)
T ss_dssp CCCCEE-EEEECSSSCEEEEEE--STTCEEEEEECS---SSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEE
T ss_pred ccCCcc-eEEEcCCCCEEEEEe--CCCCeEEEEECC---CCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEE
Confidence 345566 999999999776664 458899999984 4444 555665655555599999999999655553 899
Q ss_pred EEeccCceEEEecccCCCCeeEEEecCCCCEEEEe-cCCCc-ee---------------------eceEEEEEccCCceE
Q psy7433 81 VIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTG-AGDGD-IK---------------------SPVKCLAIDPHEEFF 137 (213)
Q Consensus 81 iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~~~~-i~---------------------~~v~~~~~~~~~~~l 137 (213)
+||+.+++.+..+.. .....+++|+|++++++++ ..++. +. ..+..++|+|+|+++
T Consensus 112 v~d~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l 190 (331)
T 3u4y_A 112 SYSFLKNKFISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFA 190 (331)
T ss_dssp EEETTTTEEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEE
T ss_pred EEECCCCCeEEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEE
Confidence 999999988877764 4456899999999865555 44455 43 346789999999955
Q ss_pred E-EecCCCcEEEEEccCCee---eeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEE-EecCCcEEEEeCCCCcc
Q psy7433 138 V-TGAGDGDIKVWSLSGNHL---LYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFS-CGADGSMKVRQLPDRDA 207 (213)
Q Consensus 138 ~-~~~~dg~i~v~d~~~~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s-~~~d~~i~iw~~~~~~~ 207 (213)
+ ++..++.|.+||+++++. +..+... ..+..++|+|++. +++ ...++.|.+||+.+++.
T Consensus 191 ~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-----------~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 191 FVANLIGNSIGILETQNPENITLLNAVGTN-----------NLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTL 255 (331)
T ss_dssp EEEETTTTEEEEEECSSTTSCEEEEEEECS-----------SCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEE
T ss_pred EEEeCCCCeEEEEECCCCcccceeeeccCC-----------CCCceEEECCCCCEEEEEEcCCCEEEEEECCCCce
Confidence 4 555689999999988777 6666543 4678899999775 544 44578899999987654
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=99.86 E-value=1e-19 Score=134.61 Aligned_cols=181 Identities=14% Similarity=0.149 Sum_probs=129.3
Q ss_pred ceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEc-CCCcEEEEeccC-
Q psy7433 9 ITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG-KKGDICVIDLRQ- 86 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~iwd~~~- 86 (213)
.+..++|+|++++|++++ ..++.|.+||++.......+..+.. ...+.+++|+|+++++++++ .++.|.+||+.+
T Consensus 85 ~~~~~~~s~dg~~l~~~~--~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~ 161 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGS--YNAGNVSVTRLEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLFTVSDD 161 (343)
T ss_dssp CCSEEEECTTSSEEEEEE--TTTTEEEEEEEETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTT
T ss_pred CCcEEEEcCCCCEEEEEe--cCCCeEEEEECCCCccccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEEEEecCC
Confidence 788999999999887764 4588999999842223334444433 34588999999999888776 889999999987
Q ss_pred ceEEE----eccc-CCCCeeEEEecCCCCEEEEec-CCCcee---------------------------eceEEEEEccC
Q psy7433 87 RVIRS----RFNA-HESPVKCLAIDPHEEFFVTGA-GDGDIK---------------------------SPVKCLAIDPH 133 (213)
Q Consensus 87 ~~~~~----~~~~-~~~~i~~~~~~~~~~~l~~~~-~~~~i~---------------------------~~v~~~~~~~~ 133 (213)
++... .+.. ....+..++|+|+++++++++ .++.+. ..+..++|+|+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~d 241 (343)
T 1ri6_A 162 GHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPD 241 (343)
T ss_dssp SCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTT
T ss_pred CceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCC
Confidence 54322 2222 345788999999999776554 556543 12336999999
Q ss_pred CceEE-EecCCCcEEEEEcc----CCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEe-cCCcEEEEeCC
Q psy7433 134 EEFFV-TGAGDGDIKVWSLS----GNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCG-ADGSMKVRQLP 203 (213)
Q Consensus 134 ~~~l~-~~~~dg~i~v~d~~----~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~-~d~~i~iw~~~ 203 (213)
+++|+ +...++.|.+||+. ..+.+..+..+ ..+..++|+|++. |++++ .++.+.+|++.
T Consensus 242 g~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~-----------~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 242 GRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTE-----------TQPRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp SSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECS-----------SSCCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred CCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCC-----------CccceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 98776 55578999999997 23444444443 3478899999764 66666 68999999654
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=2e-19 Score=133.72 Aligned_cols=183 Identities=12% Similarity=0.126 Sum_probs=141.6
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecC---------CceEEEEecCCCEEEEEc--CC
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQ---------GASSLVFAPQHQLLISAG--KK 76 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~l~~~~--~d 76 (213)
..+..++|+|+++.++.+. ..++.|.+||. .+.+.+..+..+.. .+..++|+|+++++++++ .+
T Consensus 89 ~~~~~~~~s~dg~~l~v~~--~~~~~v~~~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 163 (353)
T 3vgz_A 89 LKPFGATINNTTQTLWFGN--TVNSAVTAIDA---KTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKE 163 (353)
T ss_dssp SCCCSEEEETTTTEEEEEE--TTTTEEEEEET---TTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSS
T ss_pred CCcceEEECCCCCEEEEEe--cCCCEEEEEeC---CCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCC
Confidence 4577899999999665553 56799999998 45555555554332 268899999999877765 47
Q ss_pred CcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee---------------------eceEEEEEccCCc
Q psy7433 77 GDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK---------------------SPVKCLAIDPHEE 135 (213)
Q Consensus 77 ~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~---------------------~~v~~~~~~~~~~ 135 (213)
+.|.+||..+++....+..+...+..++|+|+++.+++++.++.+. ..+..++|+|+++
T Consensus 164 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 243 (353)
T 3vgz_A 164 SVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQ 243 (353)
T ss_dssp CEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTT
T ss_pred ceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCC
Confidence 8899999999998888875666688999999999999998888765 2355689999999
Q ss_pred eEEEecC-CCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EE-EEecCCcEEEEeCCCCcc
Q psy7433 136 FFVTGAG-DGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LF-SCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 136 ~l~~~~~-dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~-s~~~d~~i~iw~~~~~~~ 207 (213)
++++++. ++.|.+||+.+++.+..+.... ...++|+|++. ++ +...++.|.+||..+++.
T Consensus 244 ~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~------------~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~ 306 (353)
T 3vgz_A 244 RAFITDSKAAEVLVVDTRNGNILAKVAAPE------------SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKV 306 (353)
T ss_dssp EEEEEESSSSEEEEEETTTCCEEEEEECSS------------CCCEEEETTTTEEEEEETTTTEEEEEETTTTEE
T ss_pred EEEEEeCCCCEEEEEECCCCcEEEEEEcCC------------CceEEECCCCCEEEEEECCCCeEEEEECCCCeE
Confidence 7666654 5899999999988887776532 24588998753 54 444789999999987754
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.86 E-value=8.1e-19 Score=130.56 Aligned_cols=188 Identities=10% Similarity=0.102 Sum_probs=130.1
Q ss_pred ccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeee---------cCCceEEEEecCCCEEEEEc
Q psy7433 4 QCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCH---------DQGASSLVFAPQHQLLISAG 74 (213)
Q Consensus 4 ~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~---------~~~v~~~~~~~~~~~l~~~~ 74 (213)
..+...+..++|+|+|++|++++ ..++.|.+|++........+..+... ...+.+++|+|+++++++..
T Consensus 82 ~~~~~~p~~~a~spdg~~l~~~~--~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~ 159 (347)
T 3hfq_A 82 VAPGTPPAYVAVDEARQLVYSAN--YHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDL 159 (347)
T ss_dssp EEESCCCSEEEEETTTTEEEEEE--TTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEET
T ss_pred ecCCCCCEEEEECCCCCEEEEEe--CCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeC
Confidence 34677889999999999888884 37899999998432233333333211 12477899999999666677
Q ss_pred CCCcEEEEecc-CceEE--Eeccc-CCCCeeEEEecCCCCEEEEe-cCCCcee---------------------------
Q psy7433 75 KKGDICVIDLR-QRVIR--SRFNA-HESPVKCLAIDPHEEFFVTG-AGDGDIK--------------------------- 122 (213)
Q Consensus 75 ~d~~v~iwd~~-~~~~~--~~~~~-~~~~i~~~~~~~~~~~l~~~-~~~~~i~--------------------------- 122 (213)
.++.|.+||+. +++.. ..+.. ....+..++|+|++++++++ ..++.+.
T Consensus 160 ~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~ 239 (347)
T 3hfq_A 160 GSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAH 239 (347)
T ss_dssp TTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSC
T ss_pred CCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCC
Confidence 78899999998 45332 22222 23367889999999966664 4444433
Q ss_pred eceEEEEEccCCceE-EEecCCCcEEEEEccC---CeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEec-CCc
Q psy7433 123 SPVKCLAIDPHEEFF-VTGAGDGDIKVWSLSG---NHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGA-DGS 196 (213)
Q Consensus 123 ~~v~~~~~~~~~~~l-~~~~~dg~i~v~d~~~---~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~-d~~ 196 (213)
..+..++|+|+|++| ++...++.|.+||+.. .+.+..+..+. ..+..++|+|++. |++++. ++.
T Consensus 240 ~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~----------~~~~~~~~spdg~~l~v~~~~~~~ 309 (347)
T 3hfq_A 240 NGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEG----------DFPRDFDLDPTEAFVVVVNQNTDN 309 (347)
T ss_dssp CEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSS----------SCCCEEEECTTSSEEEEEETTTTE
T ss_pred CcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCC----------CCcCeEEECCCCCEEEEEEcCCCc
Confidence 126679999999977 4555689999999962 24444444432 4678999999764 766665 589
Q ss_pred EEEEeCC
Q psy7433 197 MKVRQLP 203 (213)
Q Consensus 197 i~iw~~~ 203 (213)
|.+|++.
T Consensus 310 v~v~~~d 316 (347)
T 3hfq_A 310 ATLYARD 316 (347)
T ss_dssp EEEEEEC
T ss_pred EEEEEEe
Confidence 9999554
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=99.86 E-value=2.9e-19 Score=131.90 Aligned_cols=178 Identities=12% Similarity=0.081 Sum_probs=137.2
Q ss_pred ceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeee-----ecCCceEEEEecCCCEEEEEc---------
Q psy7433 9 ITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVC-----HDQGASSLVFAPQHQLLISAG--------- 74 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~--------- 74 (213)
.+..++|+|+++.++.++ ..++.|.+||+ .+.+.+..+.. +...+..++|+|++++|++++
T Consensus 35 ~~~~~~~s~dg~~l~v~~--~~~~~v~~~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 109 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATV--NKSESLVKIDL---VTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTH 109 (337)
T ss_dssp CCCCEEECTTSSEEEEEE--TTTTEEEEEET---TTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSC
T ss_pred CccceEEcCCCCEEEEEe--CCCCeEEEEEC---CCCCeEeeEEcCCcccccccccceEECCCCCEEEEEeccccccccc
Confidence 478899999998765543 57889999998 44555554442 122678899999999998885
Q ss_pred ---CCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee----------------e------------
Q psy7433 75 ---KKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----------------S------------ 123 (213)
Q Consensus 75 ---~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------~------------ 123 (213)
.++.|.+||+.+++.+..+.. ...+.+++|+|+++++++++ +.+. .
T Consensus 110 ~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~ 186 (337)
T 1pby_B 110 FEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGLG--RDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVL 186 (337)
T ss_dssp EEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEES--SSEEEEETTTTEEEEEECSTTTTTTTBCCCBCC
T ss_pred ccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEeC--CeEEEEECCCCcEeeeeeccccCCCceeCCCcc
Confidence 579999999999888777764 45678899999999777763 3332 0
Q ss_pred -------------------------------------------------------ceEEEEEccCCceEEEecCCCcEEE
Q psy7433 124 -------------------------------------------------------PVKCLAIDPHEEFFVTGAGDGDIKV 148 (213)
Q Consensus 124 -------------------------------------------------------~v~~~~~~~~~~~l~~~~~dg~i~v 148 (213)
.+.+++|+|++++++++ ++.|.+
T Consensus 187 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~ 264 (337)
T 1pby_B 187 AVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLES 264 (337)
T ss_dssp CCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEE
T ss_pred EEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEE
Confidence 12358999999988888 689999
Q ss_pred EEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCcc
Q psy7433 149 WSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 149 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~ 207 (213)
||+.+++.+..+..+ ..+.+++|+|++ +|++++.++.|++||+.+++.
T Consensus 265 ~d~~~~~~~~~~~~~-----------~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~ 313 (337)
T 1pby_B 265 FDLEKNASIKRVPLP-----------HSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEK 313 (337)
T ss_dssp EETTTTEEEEEEECS-----------SCCCEEEECTTSCEEEEESBSSEEEEEETTTCCE
T ss_pred EECCCCcCcceecCC-----------CceeeEEECCCCCEEEEEcCCCcEEEEECcCCcE
Confidence 999988887777654 357889999965 577888899999999988754
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=99.85 E-value=3.5e-19 Score=131.79 Aligned_cols=191 Identities=10% Similarity=0.090 Sum_probs=131.4
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCc-ccccceeeeeeecCCceEEEEecCCCEEEEEc-CCCcEEEE
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLP-QKKALVQAFVCHDQGASSLVFAPQHQLLISAG-KKGDICVI 82 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~iw 82 (213)
.|...+.+++|+|++++|++++ ..++.|.+|+++.. .....+..+..+ ..+..++|+|++++|++++ .++.|.+|
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~i~~~ 111 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGV--RPEFRVLAYRIAPDDGALTFAAESALP-GSLTHISTDHQGQFVFVGSYNAGNVSVT 111 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEE--TTTTEEEEEEECTTTCCEEEEEEEECS-SCCSEEEECTTSSEEEEEETTTTEEEEE
T ss_pred ecCCCCceEEECCCCCEEEEee--cCCCeEEEEEecCCCCceeeccccccC-CCCcEEEEcCCCCEEEEEecCCCeEEEE
Confidence 3567788999999999888884 33499999998411 122334444433 3789999999999886665 48889999
Q ss_pred ec---cCceEEEecccCCCCeeEEEecCCCCEEEEec-CCCcee-----------------------eceEEEEEccCCc
Q psy7433 83 DL---RQRVIRSRFNAHESPVKCLAIDPHEEFFVTGA-GDGDIK-----------------------SPVKCLAIDPHEE 135 (213)
Q Consensus 83 d~---~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~~~~i~-----------------------~~v~~~~~~~~~~ 135 (213)
|+ .+.+....+. ....+.+++|+|+++.+++++ .++.+. ..+..++|+|+++
T Consensus 112 d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~ 190 (343)
T 1ri6_A 112 RLEDGLPVGVVDVVE-GLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQ 190 (343)
T ss_dssp EEETTEEEEEEEEEC-CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSS
T ss_pred ECCCCcccccccccc-CCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCC
Confidence 99 4445555554 344688999999999877776 555543 2456789999999
Q ss_pred eEEEe-cCCCcEEEEEccC--Cee--eeeecCCCCceeEEEecCCCeEEEEeCCCC-eEE-EEecCCcEEEEeCC
Q psy7433 136 FFVTG-AGDGDIKVWSLSG--NHL--LYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLF-SCGADGSMKVRQLP 203 (213)
Q Consensus 136 ~l~~~-~~dg~i~v~d~~~--~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~-s~~~d~~i~iw~~~ 203 (213)
+++++ ..++.|.+||+.. ++. .......... ......+..++|+|++ +|+ +...++.|.+|++.
T Consensus 191 ~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~----~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 191 YAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPEN----FSDTRWAADIHITPDGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp EEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTT----CCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCcc----ccccCCccceEECCCCCEEEEEecCCCEEEEEEEc
Confidence 66554 5789999999953 322 2222111000 0001357789999976 454 55578999999998
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.85 E-value=3.2e-20 Score=150.89 Aligned_cols=184 Identities=13% Similarity=0.049 Sum_probs=136.3
Q ss_pred cCceEEEEEeCCCCeEEEeeccCC-Cc-----cEEEEeCCCcccccceeeeeeec------------------------C
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSE-SK-----NVCLWDSLLPQKKALVQAFVCHD------------------------Q 56 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~-~~-----~i~iwd~~~~~~~~~~~~~~~~~------------------------~ 56 (213)
...+.+++|+|||++|+++ +. ++ .|++||+. .++....+..+. .
T Consensus 36 ~~~~~~~~~SpdG~~la~~---~~~d~~~~~~~i~~~d~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFL---RGKDSDRNQLDLWSYDIG---SGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMT 109 (741)
T ss_dssp CCCCEEEEECTTSSEEEEE---ECCSSCTTEEEEEEEETT---TCCEEEEECGGGTC--------------------CCE
T ss_pred CCCCCCceEecCCCEEEEE---eccCCCCcccEEEEEECC---CCceeEccchhhcccccccccchhhhhhhhhhhcccc
Confidence 4569999999999999998 45 77 89999984 343333333322 2
Q ss_pred CceEEEEecCCCEEEEEcCCCcEEEEeccCce--EEEecccCCCCeeEEEecCCCCEEEEecCCCcee------------
Q psy7433 57 GASSLVFAPQHQLLISAGKKGDICVIDLRQRV--IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------ 122 (213)
Q Consensus 57 ~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------ 122 (213)
.+..++|+|+|++|++++. +.|.+||+.++. ....+..+...+..++|+|+|+.|+.++.+ .+.
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~-~i~~~d~~~g~~~~~ 187 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGR-NLWVIDLASGRQMQL 187 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETT-EEEEEETTTTEEEEC
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCC-cEEEEecCCCCEEEe
Confidence 3789999999999999876 899999999872 344566677889999999999999988754 443
Q ss_pred ----ec-----------------eEEEEEccCCceEEEecCCC---------------------------------cEEE
Q psy7433 123 ----SP-----------------VKCLAIDPHEEFFVTGAGDG---------------------------------DIKV 148 (213)
Q Consensus 123 ----~~-----------------v~~~~~~~~~~~l~~~~~dg---------------------------------~i~v 148 (213)
.. +..+.|+|||++|++++.|+ .|.+
T Consensus 188 ~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~ 267 (741)
T 2ecf_A 188 TADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGV 267 (741)
T ss_dssp CCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEE
T ss_pred ccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEE
Confidence 10 47799999999999987665 7888
Q ss_pred EEccC-CeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEec-----CCcEEEEeCCCCcc
Q psy7433 149 WSLSG-NHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGA-----DGSMKVRQLPDRDA 207 (213)
Q Consensus 149 ~d~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~-----d~~i~iw~~~~~~~ 207 (213)
||+.+ ++......... +...+..++| |++. |+.++. +..|++||+.+++.
T Consensus 268 ~d~~~~~~~~~~~~~~~--------~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~ 324 (741)
T 2ecf_A 268 ISPAEQAQTQWIDLGKE--------QDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQ 324 (741)
T ss_dssp ECSSTTCCCEEECCCSC--------SSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCE
T ss_pred EECCCCCceEEecCCCC--------cceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCce
Confidence 89877 66543332200 1257899999 9764 665543 56899999987653
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.85 E-value=1.3e-20 Score=152.69 Aligned_cols=187 Identities=8% Similarity=0.063 Sum_probs=135.2
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecC---CceEEEEecCCCEEEEEcCC--------
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQ---GASSLVFAPQHQLLISAGKK-------- 76 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~d-------- 76 (213)
..+.+++|+|+|++++++ .|+.|++||+ .+++....+..|.. .+.+++|||||++|++++.+
T Consensus 17 ~~~~~~~~spdg~~~~~~----~dg~i~~~d~---~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~ 89 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYRE----QKGTVRLWNV---ETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSY 89 (723)
T ss_dssp CCCCCCCBSSSSCBCCCC----SSSCEEEBCG---GGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCC
T ss_pred ccccccEEcCCCcEEEEe----CCCCEEEEEC---CCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecc
Confidence 347789999999977654 7899999998 45555555555543 48999999999999998764
Q ss_pred -CcEEEEeccCceEEEecc---cCCCCeeEEEecCCCCEEEEecCCCcee-----------------ece----------
Q psy7433 77 -GDICVIDLRQRVIRSRFN---AHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPV---------- 125 (213)
Q Consensus 77 -~~v~iwd~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v---------- 125 (213)
+.+.+||+.+++. ..+. .+...+..++|+|+|+.|+.++. +.+. ..+
T Consensus 90 ~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~ 167 (723)
T 1xfd_A 90 TGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLY 167 (723)
T ss_dssp CSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHH
T ss_pred eeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeE
Confidence 7888999998875 3333 33445889999999999998876 3333 112
Q ss_pred --------EEEEEccCCceEEEecCCC----------------------------------cEEEEEccCCeeeeeecCC
Q psy7433 126 --------KCLAIDPHEEFFVTGAGDG----------------------------------DIKVWSLSGNHLLYNFPGE 163 (213)
Q Consensus 126 --------~~~~~~~~~~~l~~~~~dg----------------------------------~i~v~d~~~~~~~~~~~~~ 163 (213)
.+++|+|||++|+.++.++ .|++||+.+++....+..+
T Consensus 168 ~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~ 247 (723)
T 1xfd_A 168 EEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPP 247 (723)
T ss_dssp HHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCC
T ss_pred EEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCC
Confidence 6899999999999887543 7889998877754555443
Q ss_pred CCceeEEEecCCCeEEEEeCCCCe-EEEEec----CCcEEEEeCCCCcc
Q psy7433 164 HARSSFFKHIGQGVTQLHVDGGSR-LFSCGA----DGSMKVRQLPDRDA 207 (213)
Q Consensus 164 ~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~----d~~i~iw~~~~~~~ 207 (213)
... ..+...+..++|+|++. +++... +..|++||+.+++.
T Consensus 248 ~~~----~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~ 292 (723)
T 1xfd_A 248 DDP----RMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVC 292 (723)
T ss_dssp CCG----GGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCE
T ss_pred ccC----CCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcc
Confidence 100 00125689999999886 445432 35799999987653
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.6e-18 Score=128.91 Aligned_cols=192 Identities=15% Similarity=0.105 Sum_probs=143.9
Q ss_pred ccCceEEEEEeCCCCeEEEeeccC----CCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEE-EEcCCCcEE
Q psy7433 6 HNKITSDFVFLGSCSLVATAGHSS----ESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLI-SAGKKGDIC 80 (213)
Q Consensus 6 h~~~v~~~~~~~~~~~l~~~g~~s----~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~v~ 80 (213)
....+..++|+|+++.++++.... .++.|.+||. .+.+.+..+.. ...+..++|+|++++++ +...++.|.
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~---~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~ 114 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDP---VTLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVT 114 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECT---TTCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcC---CCCeEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEE
Confidence 345688999999999888874211 1678999998 45556666553 45578899999998555 555679999
Q ss_pred EEeccCceEEEecccCCCC---------eeEEEecCCCCEEEEec--CCCcee-----------------eceEEEEEcc
Q psy7433 81 VIDLRQRVIRSRFNAHESP---------VKCLAIDPHEEFFVTGA--GDGDIK-----------------SPVKCLAIDP 132 (213)
Q Consensus 81 iwd~~~~~~~~~~~~~~~~---------i~~~~~~~~~~~l~~~~--~~~~i~-----------------~~v~~~~~~~ 132 (213)
+||..+++.+..+..+... +.+++|+|+++.+++++ .++.+. ..+..++|+|
T Consensus 115 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~ 194 (353)
T 3vgz_A 115 AIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDS 194 (353)
T ss_dssp EEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEET
T ss_pred EEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECC
Confidence 9999999887777654322 68899999999877766 355554 3377899999
Q ss_pred CCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEe-cCCcEEEEeCCCCcc
Q psy7433 133 HEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCG-ADGSMKVRQLPDRDA 207 (213)
Q Consensus 133 ~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~-~d~~i~iw~~~~~~~ 207 (213)
+++++++++.++.|.+||+.+++....+...... ....+..++|+|++ ++++++ .++.|.+||..+++.
T Consensus 195 dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~------~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~ 265 (353)
T 3vgz_A 195 EGKRLYTTNADGELITIDTADNKILSRKKLLDDG------KEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNI 265 (353)
T ss_dssp TTTEEEEECTTSEEEEEETTTTEEEEEEECCCSS------SCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCE
T ss_pred CCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCC------CCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcE
Confidence 9999999999999999999999888777652210 01468889999965 455544 558999999987754
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.4e-18 Score=136.54 Aligned_cols=183 Identities=11% Similarity=0.066 Sum_probs=136.3
Q ss_pred eEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec----CCCEEEEEcC-CCcEEEEec
Q psy7433 10 TSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP----QHQLLISAGK-KGDICVIDL 84 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~l~~~~~-d~~v~iwd~ 84 (213)
+..++|+|+|++|+++ +.++.|.+||+.. .+.+.+..+. +...+..++|+| +++++++++. ++.|.+||.
T Consensus 181 ~~~v~~spdg~~l~v~---~~d~~V~v~D~~~-~t~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~ 255 (543)
T 1nir_A 181 VHISRMSASGRYLLVI---GRDARIDMIDLWA-KEPTKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDG 255 (543)
T ss_dssp EEEEEECTTSCEEEEE---ETTSEEEEEETTS-SSCEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEET
T ss_pred cceEEECCCCCEEEEE---CCCCeEEEEECcC-CCCcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEec
Confidence 8899999999999999 5789999999821 2345666666 455679999999 9999999884 899999999
Q ss_pred cCceEEEecccC-----------CCCeeEEEecCCCCEE-EEecCCCcee------------------eceEEEEEccCC
Q psy7433 85 RQRVIRSRFNAH-----------ESPVKCLAIDPHEEFF-VTGAGDGDIK------------------SPVKCLAIDPHE 134 (213)
Q Consensus 85 ~~~~~~~~~~~~-----------~~~i~~~~~~~~~~~l-~~~~~~~~i~------------------~~v~~~~~~~~~ 134 (213)
.+++++..+..+ ...+..+.++|++..+ ++...++.+. ..+..+.|+|+|
T Consensus 256 ~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg 335 (543)
T 1nir_A 256 ETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSH 335 (543)
T ss_dssp TTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTS
T ss_pred cccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCC
Confidence 999888877542 2268899999977654 4555566553 235578999999
Q ss_pred ceEEEe-cCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCC-Ce-EEEEe-cCCcEEEEeCCC
Q psy7433 135 EFFVTG-AGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG-SR-LFSCG-ADGSMKVRQLPD 204 (213)
Q Consensus 135 ~~l~~~-~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~-l~s~~-~d~~i~iw~~~~ 204 (213)
++++++ ..++.|.+||+++++++..+.....+ |.+....+ ++|+ +. ++++. .|++|.+||+.+
T Consensus 336 ~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~p------h~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~ 402 (543)
T 1nir_A 336 RYFMTAANNSNKVAVIDSKDRRLSALVDVGKTP------HPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDP 402 (543)
T ss_dssp CEEEEEEGGGTEEEEEETTTTEEEEEEECSSSB------CCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred CEEEEEecCCCeEEEEECCCCeEEEeeccCCCC------CCCCCccc-CCCCCccEEEeccCCCceEEEEEeCC
Confidence 976655 56889999999999998887753211 01222223 3564 54 56665 589999999987
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=6.1e-19 Score=138.66 Aligned_cols=175 Identities=13% Similarity=0.155 Sum_probs=138.3
Q ss_pred EEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEec--cCceEEE
Q psy7433 14 VFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDL--RQRVIRS 91 (213)
Q Consensus 14 ~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~--~~~~~~~ 91 (213)
.++|++.++++. +.+++|.+||. .+++++..+..+.. +..++|+|++++|++++.|+.|.+||+ .+++.+.
T Consensus 144 ~~~p~~~~~vs~---~~d~~V~v~D~---~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~ 216 (543)
T 1nir_A 144 DLDLPNLFSVTL---RDAGQIALVDG---DSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVA 216 (543)
T ss_dssp CCCGGGEEEEEE---GGGTEEEEEET---TTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEE
T ss_pred ccCCCCEEEEEE---cCCCeEEEEEC---CCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEE
Confidence 378999888887 68999999998 56777777764333 889999999999999999999999999 8888888
Q ss_pred ecccCCCCeeEEEecC----CCCEEEEecC-CCcee----------------e------------ceEEEEEccCCc-eE
Q psy7433 92 RFNAHESPVKCLAIDP----HEEFFVTGAG-DGDIK----------------S------------PVKCLAIDPHEE-FF 137 (213)
Q Consensus 92 ~~~~~~~~i~~~~~~~----~~~~l~~~~~-~~~i~----------------~------------~v~~~~~~~~~~-~l 137 (213)
.+. +...+..++|+| +++++++++. ++.+. . .+..+.++|+++ ++
T Consensus 217 ~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~ 295 (543)
T 1nir_A 217 EIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFI 295 (543)
T ss_dssp EEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEE
T ss_pred EEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEE
Confidence 887 455679999999 9999998874 55553 0 467889999766 66
Q ss_pred EEecCCCcEEEEEccCCeeee--eecCCCCceeEEEecCCCeEEEEeCCCCe-EE-EEecCCcEEEEeCCCCcc
Q psy7433 138 VTGAGDGDIKVWSLSGNHLLY--NFPGEHARSSFFKHIGQGVTQLHVDGGSR-LF-SCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 138 ~~~~~dg~i~v~d~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~-s~~~d~~i~iw~~~~~~~ 207 (213)
++...++.|.+||+.+.+.+. .+.. +..+..+.|+|+++ ++ ++..++.|.+||..+++.
T Consensus 296 vs~~~~g~i~vvd~~~~~~l~~~~i~~-----------~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l 358 (543)
T 1nir_A 296 VNVKETGKVLLVNYKDIDNLTVTSIGA-----------APFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRL 358 (543)
T ss_dssp EEETTTTEEEEEECTTSSSCEEEEEEC-----------CSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEE
T ss_pred EEECCCCeEEEEEecCCCcceeEEecc-----------CcCccCceECCCCCEEEEEecCCCeEEEEECCCCeE
Confidence 677888999999998755433 3322 24677899999765 54 445689999999998754
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.7e-18 Score=125.25 Aligned_cols=160 Identities=11% Similarity=0.135 Sum_probs=122.6
Q ss_pred CCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccC-ceEEEecccC-CCCeeEEEec
Q psy7433 29 SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQ-RVIRSRFNAH-ESPVKCLAID 106 (213)
Q Consensus 29 s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~-~~~~~~~~~~-~~~i~~~~~~ 106 (213)
+.++.|++||++ ..+. ..+..|...+.+++|+|++++|++++ ++.|.+||+.+ ++.......+ ...+.+++|+
T Consensus 19 ~~~~~i~~~d~~---~~~~-~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s 93 (297)
T 2ojh_A 19 SMRSSIEIFNIR---TRKM-RVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGIS 93 (297)
T ss_dssp CCCEEEEEEETT---TTEE-EEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEEC
T ss_pred CcceeEEEEeCC---CCce-eeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEEC
Confidence 578999999983 3333 34556888999999999999999986 78999999999 8776666554 3678999999
Q ss_pred CCCCEEEEecCC--Ccee-----------------eceEEEEEccCCceEE-EecCCCcEEEEEccC-CeeeeeecCCCC
Q psy7433 107 PHEEFFVTGAGD--GDIK-----------------SPVKCLAIDPHEEFFV-TGAGDGDIKVWSLSG-NHLLYNFPGEHA 165 (213)
Q Consensus 107 ~~~~~l~~~~~~--~~i~-----------------~~v~~~~~~~~~~~l~-~~~~dg~i~v~d~~~-~~~~~~~~~~~~ 165 (213)
|+++.+++++.+ +... ..+..++|+|++++|+ +++.++.+++|++.. ......+..+.
T Consensus 94 pdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~- 172 (297)
T 2ojh_A 94 PDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGE- 172 (297)
T ss_dssp TTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSS-
T ss_pred CCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCC-
Confidence 999999998833 2222 4578889999999777 778899999998742 22333443333
Q ss_pred ceeEEEecCCCeEEEEeCCCCe-EEEEe-cCCcEEEEeCC
Q psy7433 166 RSSFFKHIGQGVTQLHVDGGSR-LFSCG-ADGSMKVRQLP 203 (213)
Q Consensus 166 ~~~~~~~~~~~v~~~~~~~~~~-l~s~~-~d~~i~iw~~~ 203 (213)
..+.++.|+|++. |+.++ .++.+++|++.
T Consensus 173 ---------~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~ 203 (297)
T 2ojh_A 173 ---------GRNDGPDYSPDGRWIYFNSSRTGQMQIWRVR 203 (297)
T ss_dssp ---------SCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred ---------CccccceECCCCCEEEEEecCCCCccEEEEC
Confidence 5789999999764 55555 58999999886
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.82 E-value=6.3e-18 Score=125.74 Aligned_cols=194 Identities=12% Similarity=0.167 Sum_probs=130.6
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEc-CCCcEEEEe
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG-KKGDICVID 83 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~iwd 83 (213)
.+...+..++|+|+|+ |++++....++.|.+|++.. ...+.+..+..+...+..++|+|++++|++++ .++.+.+|+
T Consensus 37 ~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~-g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~ 114 (347)
T 3hfq_A 37 AATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDG-QTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMK 114 (347)
T ss_dssp EECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEET-TEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred eccCCcceEEEccCCe-EEEEEecCCCceEEEEEecC-CcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEE
Confidence 3556678899999999 55442101268999999832 22334555556778899999999999888877 678999999
Q ss_pred ccC-c--eEEEecccC---------CCCeeEEEecCCCCEEEEecCCCcee---------------------eceEEEEE
Q psy7433 84 LRQ-R--VIRSRFNAH---------ESPVKCLAIDPHEEFFVTGAGDGDIK---------------------SPVKCLAI 130 (213)
Q Consensus 84 ~~~-~--~~~~~~~~~---------~~~i~~~~~~~~~~~l~~~~~~~~i~---------------------~~v~~~~~ 130 (213)
+.. + +.+..+... ...+.+++|+|+++.+++...++.+. ..+..++|
T Consensus 115 ~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~ 194 (347)
T 3hfq_A 115 IAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVF 194 (347)
T ss_dssp ECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEE
T ss_pred eCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEE
Confidence 963 2 333333211 12478899999999666555565553 24567899
Q ss_pred ccCCceEEE-ecCCCcEEEEEccC--Cee--eeeecCCCCceeEEEecCCCeEEEEeCCCCe-E-EEEecCCcEEEEeCC
Q psy7433 131 DPHEEFFVT-GAGDGDIKVWSLSG--NHL--LYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-L-FSCGADGSMKVRQLP 203 (213)
Q Consensus 131 ~~~~~~l~~-~~~dg~i~v~d~~~--~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l-~s~~~d~~i~iw~~~ 203 (213)
+|+|+++++ ...++.|.+|++.. ++. +..+...... ......+..++|+|++. | ++...++.|.+|++.
T Consensus 195 spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~----~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~ 270 (347)
T 3hfq_A 195 SPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPAD----YTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVT 270 (347)
T ss_dssp CTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTT----CCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEEC
T ss_pred CCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCC----CCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEEC
Confidence 999996555 56788999999874 432 2222221100 00013588999999874 5 555678999999997
Q ss_pred C
Q psy7433 204 D 204 (213)
Q Consensus 204 ~ 204 (213)
.
T Consensus 271 ~ 271 (347)
T 3hfq_A 271 A 271 (347)
T ss_dssp G
T ss_pred C
Confidence 3
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=99.82 E-value=2.9e-18 Score=127.21 Aligned_cols=177 Identities=8% Similarity=-0.008 Sum_probs=130.8
Q ss_pred ceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeee------cCCceEEEEecCCCEEEEEcCC------
Q psy7433 9 ITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCH------DQGASSLVFAPQHQLLISAGKK------ 76 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~d------ 76 (213)
.+..++|+|+++.++.++ ..++.|.+||+ .+.+.+..+... ...+..++|+|++++|++++.+
T Consensus 44 ~~~~~~~s~dg~~~~v~~--~~~~~i~~~d~---~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~ 118 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLN--NHYGDIYGIDL---DTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLND 118 (349)
T ss_dssp SSCEEEECTTSSEEEEEE--TTTTEEEEEET---TTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSS
T ss_pred CCceeEECCCCCEEEEEe--CCCCcEEEEeC---CCCcEEEEEEcccccccccccccceEECCCCCEEEEEccccccccc
Confidence 578899999998665543 57899999998 445555444422 2337899999999999988865
Q ss_pred ------CcEEEEeccCceE---EEecccCCCCeeEEEecCCCCEEEEecCCCcee---------------e---------
Q psy7433 77 ------GDICVIDLRQRVI---RSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK---------------S--------- 123 (213)
Q Consensus 77 ------~~v~iwd~~~~~~---~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~---------------~--------- 123 (213)
+.|.+||+.+++. +..+. +...+.+++|+|+++ +++++.+ +. .
T Consensus 119 ~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~~~--i~~~d~~~~~~~~~~~~~~~~~~~~~~ 194 (349)
T 1jmx_B 119 HYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYVAGPD--IYKMDVKTGKYTVALPLRNWNRKGYSA 194 (349)
T ss_dssp CEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEEESSS--EEEECTTTCCEEEEECSTTCCCTTBCC
T ss_pred ccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-EEEccCc--EEEEeCCCCceeccccccccCCccccC
Confidence 8999999988533 22333 344688999999998 5544432 21 1
Q ss_pred -------------------------------------------------------------ceEEEEEcc-CCceEEEec
Q psy7433 124 -------------------------------------------------------------PVKCLAIDP-HEEFFVTGA 141 (213)
Q Consensus 124 -------------------------------------------------------------~v~~~~~~~-~~~~l~~~~ 141 (213)
.+..++|+| ++++++++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~- 273 (349)
T 1jmx_B 195 PDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV- 273 (349)
T ss_dssp CBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-
T ss_pred ccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE-
Confidence 123556779 99988888
Q ss_pred CCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCcc
Q psy7433 142 GDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 142 ~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~ 207 (213)
++.|.+||+++++.+..+... ..+.+++|+|++ +|++++.++.|++||+.+.+.
T Consensus 274 -~~~v~~~d~~~~~~~~~~~~~-----------~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~ 328 (349)
T 1jmx_B 274 -LNRLAKYDLKQRKLIKAANLD-----------HTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEK 328 (349)
T ss_dssp -ESEEEEEETTTTEEEEEEECS-----------SCCCEEEECSSSSCEEEESBSSEEEEEETTTTEE
T ss_pred -cCeEEEEECccCeEEEEEcCC-----------CCccceEECCCCCEEEEecCCCeEEEEeccccce
Confidence 889999999999888777653 356789999975 577788899999999988754
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=7.6e-19 Score=142.13 Aligned_cols=187 Identities=13% Similarity=0.127 Sum_probs=133.4
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCc--ccccceeeeeeecCC--------------ceEEEEecCCC
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLP--QKKALVQAFVCHDQG--------------ASSLVFAPQHQ 68 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~--~~~~~~~~~~~~~~~--------------v~~~~~~~~~~ 68 (213)
.+...+.+++|+|+|+.|+++ .++.|++||+... ..++.......+... +.++.|+|+|+
T Consensus 118 ~~~~~~~~~~~SpdG~~la~~----~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~ 193 (706)
T 2z3z_A 118 DTNEETASLDFSPVGDRVAYV----RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGS 193 (706)
T ss_dssp CCTTCCTTCEECTTSSEEEEE----ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSS
T ss_pred CCcccccCCcCCCCCCEEEEE----ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCC
Confidence 456678889999999999997 5799999998430 003333222222222 48899999999
Q ss_pred EEEEEc---------------------------------CCCcEEEEeccCceEEEecc--cCCCCeeEEEecCCCCEEE
Q psy7433 69 LLISAG---------------------------------KKGDICVIDLRQRVIRSRFN--AHESPVKCLAIDPHEEFFV 113 (213)
Q Consensus 69 ~l~~~~---------------------------------~d~~v~iwd~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~ 113 (213)
+|++++ .+..|.+||+.+++...... .+...+.+++|+|+++.++
T Consensus 194 ~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~ 273 (706)
T 2z3z_A 194 CLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILY 273 (706)
T ss_dssp EEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEE
T ss_pred EEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEE
Confidence 999887 44679999999887654442 3556789999999999988
Q ss_pred EecCCC-----cee----------------------eceEEEEEcc--CCceEEEecCCCcEEEEEcc-CCeeeeeecCC
Q psy7433 114 TGAGDG-----DIK----------------------SPVKCLAIDP--HEEFFVTGAGDGDIKVWSLS-GNHLLYNFPGE 163 (213)
Q Consensus 114 ~~~~~~-----~i~----------------------~~v~~~~~~~--~~~~l~~~~~dg~i~v~d~~-~~~~~~~~~~~ 163 (213)
+++.++ .+. ..+..+.|+| +|+++++++.++.+++|++. ++..+..+..+
T Consensus 274 ~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~ 353 (706)
T 2z3z_A 274 VAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKG 353 (706)
T ss_dssp EEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCS
T ss_pred EEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCC
Confidence 876554 221 0124579999 99999999999999999886 56666666554
Q ss_pred CCceeEEEecCCCeEE-EEeCCCC-eEEE-EecCC----cEEEEeCCCC
Q psy7433 164 HARSSFFKHIGQGVTQ-LHVDGGS-RLFS-CGADG----SMKVRQLPDR 205 (213)
Q Consensus 164 ~~~~~~~~~~~~~v~~-~~~~~~~-~l~s-~~~d~----~i~iw~~~~~ 205 (213)
. ..+.. ++|+|++ .|+. ++.++ .|..||+.++
T Consensus 354 ~----------~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~ 392 (706)
T 2z3z_A 354 E----------WEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGG 392 (706)
T ss_dssp S----------SCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCC
T ss_pred C----------eEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCC
Confidence 3 45766 7999976 4544 44444 5666676654
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.82 E-value=8.8e-18 Score=124.01 Aligned_cols=181 Identities=9% Similarity=0.175 Sum_probs=126.7
Q ss_pred EEeCCCCe-EEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcC-CCcEEEEeccCceE-E
Q psy7433 14 VFLGSCSL-VATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGK-KGDICVIDLRQRVI-R 90 (213)
Q Consensus 14 ~~~~~~~~-l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~v~iwd~~~~~~-~ 90 (213)
.|.+++.. +++. +.++.|.+||. .+++.+..+..+...+ .++|+|+++++++++. ++.|.+||+.+++. .
T Consensus 4 ~~~~~~~~~~v~~---~~~~~v~~~d~---~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~ 76 (331)
T 3u4y_A 4 MFQTTSNFGIVVE---QHLRRISFFST---DTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKV 76 (331)
T ss_dssp ---CCCCEEEEEE---GGGTEEEEEET---TTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEE
T ss_pred eEcCCCCEEEEEe---cCCCeEEEEeC---cccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeE
Confidence 45565555 5555 68899999998 4555666665555556 9999999997666554 88999999999887 6
Q ss_pred EecccCCCCeeEEEecCCCCEEEEecCCC---cee----------------eceEEEEEccCCceEEEe-cCCCc-EEEE
Q psy7433 91 SRFNAHESPVKCLAIDPHEEFFVTGAGDG---DIK----------------SPVKCLAIDPHEEFFVTG-AGDGD-IKVW 149 (213)
Q Consensus 91 ~~~~~~~~~i~~~~~~~~~~~l~~~~~~~---~i~----------------~~v~~~~~~~~~~~l~~~-~~dg~-i~v~ 149 (213)
..+..+..+..+++|+|++++++++..++ .+. ..+.+++|+|+|++++++ ..++. |.+|
T Consensus 77 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~ 156 (331)
T 3u4y_A 77 VAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRF 156 (331)
T ss_dssp EEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEE
T ss_pred EecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEE
Confidence 66666666665699999999998666553 554 456899999999855554 55578 9999
Q ss_pred EccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-E-EEEecCCcEEEEeCCCCcc
Q psy7433 150 SLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-L-FSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 150 d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l-~s~~~d~~i~iw~~~~~~~ 207 (213)
++.....+..... . ....+..+..++|+|++. + ++...++.|++||+.+++.
T Consensus 157 ~~~~~g~~~~~~~-~-----~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 157 KIDADGVLFDTGQ-E-----FISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPEN 210 (331)
T ss_dssp EECTTCCEEEEEE-E-----EECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTS
T ss_pred EECCCCcEeecCC-c-----cccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcc
Confidence 9865333211110 0 001125689999999774 4 4455688999999987754
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=6.2e-19 Score=142.62 Aligned_cols=181 Identities=10% Similarity=0.082 Sum_probs=130.1
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccC-
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQ- 86 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~- 86 (213)
..|.+++|+|+ ..++.+ .++.|++||+. .++. ..+..+...+..++|+|+|++|+++ .++.|++||+.+
T Consensus 82 ~~v~~~~~spd-~~~~~~----~~~~i~~~d~~---~~~~-~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~ 151 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF----TQGGLVGFDML---ARKV-TYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKL 151 (706)
T ss_dssp CCCEEEEETTT-TEEEEE----ETTEEEEEETT---TTEE-EEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCT
T ss_pred cCceeEEECCC-CeEEEE----ECCEEEEEECC---CCce-EEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcc
Confidence 56999999999 665555 36999999983 3333 3344566778999999999999986 679999999998
Q ss_pred ----ceEEEecccCCCC--------------eeEEEecCCCCEEEEecCC------------------------------
Q psy7433 87 ----RVIRSRFNAHESP--------------VKCLAIDPHEEFFVTGAGD------------------------------ 118 (213)
Q Consensus 87 ----~~~~~~~~~~~~~--------------i~~~~~~~~~~~l~~~~~~------------------------------ 118 (213)
++........... +.+++|+||+++|++++.|
T Consensus 152 ~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~ 231 (706)
T 2z3z_A 152 GEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTP 231 (706)
T ss_dssp TSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSC
T ss_pred cccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCC
Confidence 7766544433332 4899999999999988721
Q ss_pred ---Ccee-------------------eceEEEEEccCCceEEEecCCC-----cEEEEEccCCeeeeeecCCCCceeEEE
Q psy7433 119 ---GDIK-------------------SPVKCLAIDPHEEFFVTGAGDG-----DIKVWSLSGNHLLYNFPGEHARSSFFK 171 (213)
Q Consensus 119 ---~~i~-------------------~~v~~~~~~~~~~~l~~~~~dg-----~i~v~d~~~~~~~~~~~~~~~~~~~~~ 171 (213)
..+. ..+.+++|+|||++|++++.++ .|.+||+.+++....+..+....
T Consensus 232 ~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~---- 307 (706)
T 2z3z_A 232 SHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKH---- 307 (706)
T ss_dssp CCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSS----
T ss_pred CCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCC----
Confidence 2222 3478899999999999887765 89999998883332222111000
Q ss_pred ecCCCeEEEEeCC--CCe-EEEEecCCcEEEEeCC
Q psy7433 172 HIGQGVTQLHVDG--GSR-LFSCGADGSMKVRQLP 203 (213)
Q Consensus 172 ~~~~~v~~~~~~~--~~~-l~s~~~d~~i~iw~~~ 203 (213)
....+..+.|+| ++. +++++.|+.+++|.+.
T Consensus 308 -~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~ 341 (706)
T 2z3z_A 308 -YVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYD 341 (706)
T ss_dssp -CCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEE
T ss_pred -eECccCCceeecCCCCEEEEEEccCCccEEEEEE
Confidence 001246789999 875 6777788999999876
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.4e-18 Score=141.33 Aligned_cols=183 Identities=11% Similarity=0.084 Sum_probs=131.8
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecC----------------CceEEEEecC
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQ----------------GASSLVFAPQ 66 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~----------------~v~~~~~~~~ 66 (213)
+..|...+.+++|+|||++|+.+ .++.|++||+. .++.......+.. .+..++|+||
T Consensus 147 l~~~~~~~~~~~~SPDG~~la~~----~~~~i~~~d~~---~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpD 219 (741)
T 2ecf_A 147 LTHGEGFATDAKLSPKGGFVSFI----RGRNLWVIDLA---SGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPD 219 (741)
T ss_dssp CCCSSSCEEEEEECTTSSEEEEE----ETTEEEEEETT---TTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTT
T ss_pred cccCCcccccccCCCCCCEEEEE----eCCcEEEEecC---CCCEEEeccCCccceeccccceeeeeccccccceEECCC
Confidence 45677889999999999999998 35699999984 3333222222222 1478999999
Q ss_pred CCEEEEEcCCC---------------------------------cEEEEeccC-ceEEEecc--cCCCCeeEEEecCCCC
Q psy7433 67 HQLLISAGKKG---------------------------------DICVIDLRQ-RVIRSRFN--AHESPVKCLAIDPHEE 110 (213)
Q Consensus 67 ~~~l~~~~~d~---------------------------------~v~iwd~~~-~~~~~~~~--~~~~~i~~~~~~~~~~ 110 (213)
|++|++++.|+ .|.+||+.+ ++...... .+...+..++| |+++
T Consensus 220 g~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~ 298 (741)
T 2ecf_A 220 DSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQ 298 (741)
T ss_dssp SSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETT
T ss_pred CCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCC
Confidence 99999887665 788999988 76554432 35667899999 9999
Q ss_pred EEEEecCC-----Ccee----------------e-----ceEEEEEccCCceEEEecCCCcEEEEEcc-CCeeeeeecCC
Q psy7433 111 FFVTGAGD-----GDIK----------------S-----PVKCLAIDPHEEFFVTGAGDGDIKVWSLS-GNHLLYNFPGE 163 (213)
Q Consensus 111 ~l~~~~~~-----~~i~----------------~-----~v~~~~~~~~~~~l~~~~~dg~i~v~d~~-~~~~~~~~~~~ 163 (213)
.|++++.+ ..+. . .+..++|+|+|+++++++.+|.+++|.+. .++ ...+..+
T Consensus 299 ~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~ 377 (741)
T 2ecf_A 299 HLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHG 377 (741)
T ss_dssp EEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCS
T ss_pred EEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeec
Confidence 98876542 1221 1 34589999999999999999988888775 344 5556554
Q ss_pred CCceeEEEecCCCeEEE-EeCCCC-eE-EEEecCC--cEEEEeCCC
Q psy7433 164 HARSSFFKHIGQGVTQL-HVDGGS-RL-FSCGADG--SMKVRQLPD 204 (213)
Q Consensus 164 ~~~~~~~~~~~~~v~~~-~~~~~~-~l-~s~~~d~--~i~iw~~~~ 204 (213)
. ..+..+ .|+|++ .| ++++.++ .++||++..
T Consensus 378 ~----------~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 378 N----------WSVDELLAVDEKAGLAYFRAGIESARESQIYAVPL 413 (741)
T ss_dssp S----------SCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEET
T ss_pred c----------eEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEc
Confidence 3 567777 599976 45 4555555 899999864
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.2e-17 Score=140.41 Aligned_cols=181 Identities=7% Similarity=-0.027 Sum_probs=140.3
Q ss_pred ccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCC------
Q psy7433 4 QCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKG------ 77 (213)
Q Consensus 4 ~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~------ 77 (213)
.+|...+..++|+|+|++|+++ +.++.|++||+ .+++.......|...+..++|+|+|++|++++.++
T Consensus 375 ~~~~~~~~~~~~SpDG~~la~~---~~~~~v~~~d~---~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~ 448 (1045)
T 1k32_A 375 EENLGNVFAMGVDRNGKFAVVA---NDRFEIMTVDL---ETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDG 448 (1045)
T ss_dssp CCCCCSEEEEEECTTSSEEEEE---ETTSEEEEEET---TTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCS
T ss_pred cCCccceeeeEECCCCCEEEEE---CCCCeEEEEEC---CCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccC
Confidence 3677889999999999999998 68899999999 45555555557888899999999999998877644
Q ss_pred ----cEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCce--------------------------------
Q psy7433 78 ----DICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI-------------------------------- 121 (213)
Q Consensus 78 ----~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i-------------------------------- 121 (213)
.|++||+.+++ ...+..+...+..++|+|+++.|+.++.++..
T Consensus 449 ~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (1045)
T 1k32_A 449 YVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTK 527 (1045)
T ss_dssp CCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGG
T ss_pred CCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhccccccccCceeEEEEeCCCCCCccc
Confidence 89999999887 56677778888999999999988877753210
Q ss_pred ----------------------e------eceEEEEEccCCceEEE-------------ecCCCcEEEEEccCCeeeeee
Q psy7433 122 ----------------------K------SPVKCLAIDPHEEFFVT-------------GAGDGDIKVWSLSGNHLLYNF 160 (213)
Q Consensus 122 ----------------------~------~~v~~~~~~~~~~~l~~-------------~~~dg~i~v~d~~~~~~~~~~ 160 (213)
. ..+..++++|+++++++ ......|.+||+.+++.....
T Consensus 528 ~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~~~l~ 607 (1045)
T 1k32_A 528 LVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVK 607 (1045)
T ss_dssp CCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEEEEE
T ss_pred cCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEECCCCcEEEee
Confidence 0 34678899999987775 122457888888876643222
Q ss_pred cCCCCceeEEEecCCCeEEEEeCCCCe-EEEEecCCcEEEEeCCCCc
Q psy7433 161 PGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 161 ~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~d~~i~iw~~~~~~ 206 (213)
..+..++++|++. |++++.+ .+++||+.+++
T Consensus 608 --------------~~v~~~~~S~DG~~l~~~~~~-~i~~~d~~~~~ 639 (1045)
T 1k32_A 608 --------------NNLTDLRLSADRKTVMVRKDD-GKIYTFPLEKP 639 (1045)
T ss_dssp --------------EEEEEEEECTTSCEEEEEETT-SCEEEEESSCT
T ss_pred --------------cCcceEEECCCCCEEEEEcCC-cEEEEeCccCc
Confidence 2478899999765 6766655 89999998775
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.80 E-value=1.7e-18 Score=140.36 Aligned_cols=182 Identities=9% Similarity=-0.022 Sum_probs=125.5
Q ss_pred ceEEEEEeCCCCeEEEeecc------CCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEE
Q psy7433 9 ITSDFVFLGSCSLVATAGHS------SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVI 82 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~------s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iw 82 (213)
.|.+++|+|||++|+++... +.++.+.+||+..... ..+.....+...+..++|||+|+.|+.++. +.|++|
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~ 139 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYC 139 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEE
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEE
Confidence 49999999999999988310 0137899999843221 122222234445889999999999999876 799999
Q ss_pred eccCceEEEecccCCCCe------------------eEEEecCCCCEEEEecCCC-------------------------
Q psy7433 83 DLRQRVIRSRFNAHESPV------------------KCLAIDPHEEFFVTGAGDG------------------------- 119 (213)
Q Consensus 83 d~~~~~~~~~~~~~~~~i------------------~~~~~~~~~~~l~~~~~~~------------------------- 119 (213)
|+.+++.......+...+ .+++|+||++.|++++.++
T Consensus 140 ~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (723)
T 1xfd_A 140 AHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYP 219 (723)
T ss_dssp SSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECC
T ss_pred ECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCC
Confidence 999887665554433333 7899999999999887542
Q ss_pred ---------cee-----------------------eceEEEEEccCCceEEEecC----CCcEEEEEccCCeeeeeecCC
Q psy7433 120 ---------DIK-----------------------SPVKCLAIDPHEEFFVTGAG----DGDIKVWSLSGNHLLYNFPGE 163 (213)
Q Consensus 120 ---------~i~-----------------------~~v~~~~~~~~~~~l~~~~~----dg~i~v~d~~~~~~~~~~~~~ 163 (213)
.+. ..+..++|+|||+++++.+. +..|.+||+.+++....+..+
T Consensus 220 ~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~ 299 (723)
T 1xfd_A 220 KAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDE 299 (723)
T ss_dssp BTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEE
T ss_pred CCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEec
Confidence 221 23567999999998876643 357999999888765554332
Q ss_pred CCceeEEEecCCCe----EEEEeCCCCe-EEE--EecCC------cEEEEe
Q psy7433 164 HARSSFFKHIGQGV----TQLHVDGGSR-LFS--CGADG------SMKVRQ 201 (213)
Q Consensus 164 ~~~~~~~~~~~~~v----~~~~~~~~~~-l~s--~~~d~------~i~iw~ 201 (213)
.. ..+ ..++|+|++. |+. ...++ .|.+||
T Consensus 300 ~~---------~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d 341 (723)
T 1xfd_A 300 SE---------AWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSS 341 (723)
T ss_dssp CS---------SCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEEC
T ss_pred cC---------CEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEe
Confidence 11 222 3679999764 553 45666 566777
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.80 E-value=5.7e-19 Score=143.16 Aligned_cols=176 Identities=10% Similarity=0.090 Sum_probs=124.8
Q ss_pred EEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecC---CceEEEEecCCCEEEEEcC---------CCc
Q psy7433 11 SDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQ---GASSLVFAPQHQLLISAGK---------KGD 78 (213)
Q Consensus 11 ~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~---------d~~ 78 (213)
.+++|+|++++++++ .|+.|++||+ ..++....+..+.. .+.+++|||||++|+.++. ++.
T Consensus 19 ~~~~~s~dg~~~~~~----~d~~i~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~ 91 (719)
T 1z68_A 19 FFPNWISGQEYLHQS----ADNNIVLYNI---ETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTAT 91 (719)
T ss_dssp CCCEESSSSEEEEEC----TTSCEEEEES---SSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEE
T ss_pred CccEECCCCeEEEEc----CCCCEEEEEc---CCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceE
Confidence 368999999766665 6899999998 34444444443333 4899999999999998876 689
Q ss_pred EEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee------------------ece---------------
Q psy7433 79 ICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------SPV--------------- 125 (213)
Q Consensus 79 v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------~~v--------------- 125 (213)
|++||+.+++.+.... ....+..++|+|||+.|+.+. ++.++ ..+
T Consensus 92 i~~~d~~~g~~~~~~~-l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~ 169 (719)
T 1z68_A 92 YYIYDLSNGEFVRGNE-LPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLA 169 (719)
T ss_dssp EEEEETTTTEECCSSC-CCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTC
T ss_pred EEEEECCCCcccccee-cCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeeccc
Confidence 9999999987631111 235688999999999999876 44443 001
Q ss_pred --EEEEEccCCceEEEecCCC----------------------------------cEEEEEccCCeee--ee------ec
Q psy7433 126 --KCLAIDPHEEFFVTGAGDG----------------------------------DIKVWSLSGNHLL--YN------FP 161 (213)
Q Consensus 126 --~~~~~~~~~~~l~~~~~dg----------------------------------~i~v~d~~~~~~~--~~------~~ 161 (213)
.+++|+|||++|+.++.|. .|++||+.+++.. .. +.
T Consensus 170 ~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~ 249 (719)
T 1z68_A 170 TKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIA 249 (719)
T ss_dssp SSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHH
T ss_pred CcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCC
Confidence 4899999999999887552 7889998776542 11 12
Q ss_pred CCCCceeEEEecCCCeEEEEeCCCCeEEEE-ecC----CcEEEEe----CCCC
Q psy7433 162 GEHARSSFFKHIGQGVTQLHVDGGSRLFSC-GAD----GSMKVRQ----LPDR 205 (213)
Q Consensus 162 ~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~-~~d----~~i~iw~----~~~~ 205 (213)
.+. ..+..++|+|+++++.. ... ..|.+|| ..++
T Consensus 250 ~~~----------~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g 292 (719)
T 1z68_A 250 SSD----------YYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTW 292 (719)
T ss_dssp TSC----------EEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSE
T ss_pred CCc----------ceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCC
Confidence 222 57899999998875433 222 2488899 6554
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=5.6e-18 Score=142.51 Aligned_cols=178 Identities=15% Similarity=0.102 Sum_probs=142.6
Q ss_pred ccCceEEEEEe-CCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecC-CceEEEEecCCCEEEEEcCCCcEE-EE
Q psy7433 6 HNKITSDFVFL-GSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQ-GASSLVFAPQHQLLISAGKKGDIC-VI 82 (213)
Q Consensus 6 h~~~v~~~~~~-~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d~~v~-iw 82 (213)
|...+.+++|+ |+|+.|+++ + ++.|.+|++. ... ...+..|.. .+..++|+ +++.|+.++.+..+. +|
T Consensus 294 ~~~~v~~~~~S~pdG~~la~~---~-~~~i~~~~~~---~~~-~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~ 364 (1045)
T 1k32_A 294 SIPSKFAEDFSPLDGDLIAFV---S-RGQAFIQDVS---GTY-VLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIY 364 (1045)
T ss_dssp ECGGGGEEEEEECGGGCEEEE---E-TTEEEEECTT---SSB-EEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEE
T ss_pred cccccceeeecCCCCCEEEEE---E-cCEEEEEcCC---CCc-eEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEE
Confidence 55679999999 999999998 3 7899999984 222 233455666 78999999 999999988888888 89
Q ss_pred eccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCCC-
Q psy7433 83 DLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDG- 144 (213)
Q Consensus 83 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg- 144 (213)
|+.+++... +..+...+..++|+|+++.|++++.++.+. ..+..++|+|||++|++++.++
T Consensus 365 d~~~~~~~~-l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~ 443 (1045)
T 1k32_A 365 DYRTGKAEK-FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKH 443 (1045)
T ss_dssp ETTTCCEEE-CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECS
T ss_pred ECCCCCceE-ecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCcc
Confidence 998776544 346778899999999999999999988775 3467899999999998887654
Q ss_pred ---------cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCC
Q psy7433 145 ---------DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 145 ---------~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~ 204 (213)
.|++||+.+++ ...+..+. ..+..++|+|++ +|+.++.++...+|+...
T Consensus 444 ~~~~~~~~~~i~l~d~~~g~-~~~l~~~~----------~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~ 502 (1045)
T 1k32_A 444 GETDGYVMQAIHVYDMEGRK-IFAATTEN----------SHDYAPAFDADSKNLYYLSYRSLDPSPDRVV 502 (1045)
T ss_dssp STTCSCCEEEEEEEETTTTE-EEECSCSS----------SBEEEEEECTTSCEEEEEESCCCCCEECSSS
T ss_pred ccccCCCCCeEEEEECCCCc-EEEeeCCC----------cccCCceEcCCCCEEEEEecccCCcCcchhc
Confidence 89999998877 55555554 568889999976 488888888888887653
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=99.79 E-value=4.3e-16 Score=116.47 Aligned_cols=183 Identities=7% Similarity=0.065 Sum_probs=121.4
Q ss_pred ccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeee-----------cCCceEEEEecCCCEEEEEc
Q psy7433 6 HNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCH-----------DQGASSLVFAPQHQLLISAG 74 (213)
Q Consensus 6 h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~~l~~~~ 74 (213)
+...+..+++ ++++|+++. ..++.|.+|++........+.....+ ...+.+++|+|++++|++++
T Consensus 98 ~~~~p~~~~~--dg~~l~~~~--~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 173 (361)
T 3scy_A 98 MGADPCYLTT--NGKNIVTAN--YSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADD 173 (361)
T ss_dssp SSSCEEEEEE--CSSEEEEEE--TTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEE
T ss_pred CCCCcEEEEE--CCCEEEEEE--CCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEe
Confidence 3445666777 788777774 46889999998532222122111111 12347899999999666554
Q ss_pred -CCCcEEEEeccCce-------E------EEecccCCCCeeEEEecCCCCEEEEec-CCCcee-----------------
Q psy7433 75 -KKGDICVIDLRQRV-------I------RSRFNAHESPVKCLAIDPHEEFFVTGA-GDGDIK----------------- 122 (213)
Q Consensus 75 -~d~~v~iwd~~~~~-------~------~~~~~~~~~~i~~~~~~~~~~~l~~~~-~~~~i~----------------- 122 (213)
.++.|.+|++.... . ..........+..++|+|+++++++++ .++.+.
T Consensus 174 ~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~ 253 (361)
T 3scy_A 174 LGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAA 253 (361)
T ss_dssp TTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEES
T ss_pred CCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEec
Confidence 57899999887533 1 111222445678999999999887776 466554
Q ss_pred -----eceEEEEEccCCceEEEecC--CCcEEEEEcc--CCe--eeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEE
Q psy7433 123 -----SPVKCLAIDPHEEFFVTGAG--DGDIKVWSLS--GNH--LLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFS 190 (213)
Q Consensus 123 -----~~v~~~~~~~~~~~l~~~~~--dg~i~v~d~~--~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s 190 (213)
..+..++|+|+|++|+++.. ++.|.+|++. +++ .+..+.. +..+..++|+|++. |++
T Consensus 254 ~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-----------g~~~~~~~~spdg~~l~~ 322 (361)
T 3scy_A 254 DTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-----------GIHPRNFIITPNGKYLLV 322 (361)
T ss_dssp CSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-----------SSCCCEEEECTTSCEEEE
T ss_pred CCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-----------CCCCceEEECCCCCEEEE
Confidence 22458999999998876665 4899999995 333 3333333 14678899999764 666
Q ss_pred Ee-cCCcEEEEeCC
Q psy7433 191 CG-ADGSMKVRQLP 203 (213)
Q Consensus 191 ~~-~d~~i~iw~~~ 203 (213)
++ .++.|.+|++.
T Consensus 323 ~~~~~~~v~v~~~d 336 (361)
T 3scy_A 323 ACRDTNVIQIFERD 336 (361)
T ss_dssp EETTTTEEEEEEEC
T ss_pred EECCCCCEEEEEEE
Confidence 66 67899997665
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=99.78 E-value=6e-17 Score=120.12 Aligned_cols=142 Identities=15% Similarity=0.157 Sum_probs=107.1
Q ss_pred EEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeec-CCceEEEEecCCCEEE-EEcCCCcEEEEeccCceE
Q psy7433 12 DFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHD-QGASSLVFAPQHQLLI-SAGKKGDICVIDLRQRVI 89 (213)
Q Consensus 12 ~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~-~~~~d~~v~iwd~~~~~~ 89 (213)
.+++++++.+++++ +.++.|.+||. .+.+.+..+..+. ..+..++|+|++++++ +...++.|.+||+.+++.
T Consensus 4 g~~~~~~~~~~v~~---~~~~~v~~~d~---~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~ 77 (349)
T 1jmx_B 4 GPALKAGHEYMIVT---NYPNNLHVVDV---ASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKN 77 (349)
T ss_dssp CCCCCTTCEEEEEE---ETTTEEEEEET---TTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred cccccCCCEEEEEe---CCCCeEEEEEC---CCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcE
Confidence 34677888889988 68999999998 4555666655433 1578999999998654 556789999999999988
Q ss_pred EEecccCC------CCeeEEEecCCCCEEEEecCC------------Ccee-------------------eceEEEEEcc
Q psy7433 90 RSRFNAHE------SPVKCLAIDPHEEFFVTGAGD------------GDIK-------------------SPVKCLAIDP 132 (213)
Q Consensus 90 ~~~~~~~~------~~i~~~~~~~~~~~l~~~~~~------------~~i~-------------------~~v~~~~~~~ 132 (213)
...+.... ..+..++|+|+++++++++.+ +.+. ..+.+++|+|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~ 157 (349)
T 1jmx_B 78 TFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAAD 157 (349)
T ss_dssp EEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECT
T ss_pred EEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECC
Confidence 77665332 237899999999999988854 4443 3467888999
Q ss_pred CCceEEEecCCCcEEEEEccCCeeeeeecC
Q psy7433 133 HEEFFVTGAGDGDIKVWSLSGNHLLYNFPG 162 (213)
Q Consensus 133 ~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~ 162 (213)
+++ +++++. .|.+||+.+++....+..
T Consensus 158 dg~-l~~~~~--~i~~~d~~~~~~~~~~~~ 184 (349)
T 1jmx_B 158 DGS-LYVAGP--DIYKMDVKTGKYTVALPL 184 (349)
T ss_dssp TSC-EEEESS--SEEEECTTTCCEEEEECS
T ss_pred CCc-EEEccC--cEEEEeCCCCceeccccc
Confidence 999 555543 499999998887766654
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.77 E-value=1.4e-17 Score=132.13 Aligned_cols=181 Identities=9% Similarity=0.018 Sum_probs=126.9
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeec-CCceEEEEecCCCEEEEEcC---CCcEEEE
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHD-QGASSLVFAPQHQLLISAGK---KGDICVI 82 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~---d~~v~iw 82 (213)
..+|++++|+|||+.||+++ ..+++++||++ ..+. .+.+..+. ..+..++|+|+ +++++++. +....+|
T Consensus 21 ~~~~~~~~~~~DG~~la~~s--~~~g~~~lw~~---~~g~-~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~ 93 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVG--FSEGSVNAYLY---DGGE-TVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALF 93 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEE--EETTEEEEEEE---ETTE-EEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEE
T ss_pred ccchheeecCCCCCeEEEEE--ccCCceeEEEE---cCCC-cEeeecccccccccccCCCC-eEEEEeccCCCCcceEEE
Confidence 56799999999999999984 24999999997 3333 33444444 57899999999 77777664 4556666
Q ss_pred eccC---ceEEEecccCCCCeeEEEecCCCC--EEEEecCCCcee-------------eceEEEEEccCCceEEEecCC-
Q psy7433 83 DLRQ---RVIRSRFNAHESPVKCLAIDPHEE--FFVTGAGDGDIK-------------SPVKCLAIDPHEEFFVTGAGD- 143 (213)
Q Consensus 83 d~~~---~~~~~~~~~~~~~i~~~~~~~~~~--~l~~~~~~~~i~-------------~~v~~~~~~~~~~~l~~~~~d- 143 (213)
.+.. +... .+... ......+|+|+++ .++++..++... .+..+++|+|||++|+.++.+
T Consensus 94 ~~~~~~~g~~~-~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~~~~~~spDG~~la~~~~~~ 171 (582)
T 3o4h_A 94 KVNTSRPGEEQ-RLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPGFGFVSDIRGDLIAGLGFFG 171 (582)
T ss_dssp EEETTSTTCCE-ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESSCEEEEEEETTEEEEEEEEE
T ss_pred EEeccCCCccc-cccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCCceEEECCCCCEEEEEEEcC
Confidence 5543 2222 33322 2344668888775 344444444322 222688999999999988776
Q ss_pred ---CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEecCC--cEEEEeCCCCcc
Q psy7433 144 ---GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGADG--SMKVRQLPDRDA 207 (213)
Q Consensus 144 ---g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~d~--~i~iw~~~~~~~ 207 (213)
+.|++||+.+++.. .+..+. ..+..++|+|++. |+++..++ .|++||+.+++.
T Consensus 172 ~~~~~i~~~d~~~g~~~-~l~~~~----------~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~ 230 (582)
T 3o4h_A 172 GGRVSLFTSNLSSGGLR-VFDSGE----------GSFSSASISPGMKVTAGLETAREARLVTVDPRDGSV 230 (582)
T ss_dssp TTEEEEEEEETTTCCCE-EECCSS----------CEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCE
T ss_pred CCCeEEEEEcCCCCCce-EeecCC----------CccccceECCCCCEEEEccCCCeeEEEEEcCCCCcE
Confidence 78999999877654 454443 5689999999875 77777788 899999987654
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=99.76 E-value=3.5e-16 Score=115.35 Aligned_cols=178 Identities=13% Similarity=0.135 Sum_probs=127.7
Q ss_pred CeEEEeeccCCCccEEEEeCCCcccccceeeeeeecC--CceEEEEecCCCEE-EEEcCCCcEEEEeccCceEEEecccC
Q psy7433 20 SLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQ--GASSLVFAPQHQLL-ISAGKKGDICVIDLRQRVIRSRFNAH 96 (213)
Q Consensus 20 ~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l-~~~~~d~~v~iwd~~~~~~~~~~~~~ 96 (213)
++++++ +.++.|.+||. .+.+.+..+..... .+..++|+|+++++ +++..++.|.+||+.+++.+..+...
T Consensus 2 ~~~v~~---~~~~~v~~~d~---~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~ 75 (337)
T 1pby_B 2 DYILAP---ARPDKLVVIDT---EKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLS 75 (337)
T ss_dssp EEEEEE---ETTTEEEEEET---TTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECC
T ss_pred cEEEEc---CCCCeEEEEEC---CCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcC
Confidence 467777 58999999998 45556665543221 47899999999765 55666889999999999877766532
Q ss_pred C-----CCeeEEEecCCCCEEEEec------------CCCcee----------------eceEEEEEccCCceEEEecCC
Q psy7433 97 E-----SPVKCLAIDPHEEFFVTGA------------GDGDIK----------------SPVKCLAIDPHEEFFVTGAGD 143 (213)
Q Consensus 97 ~-----~~i~~~~~~~~~~~l~~~~------------~~~~i~----------------~~v~~~~~~~~~~~l~~~~~d 143 (213)
. ..+..++|+|+++.++++. .++.+. ..+.+++|+|++++++++ +
T Consensus 76 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~ 153 (337)
T 1pby_B 76 TPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--G 153 (337)
T ss_dssp BTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE--S
T ss_pred CcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe--C
Confidence 1 2577899999999888885 355554 356789999999988887 6
Q ss_pred CcEEEEEccCCeeeeeecCCC--Cce------------------------------------------------------
Q psy7433 144 GDIKVWSLSGNHLLYNFPGEH--ARS------------------------------------------------------ 167 (213)
Q Consensus 144 g~i~v~d~~~~~~~~~~~~~~--~~~------------------------------------------------------ 167 (213)
+.|.+||+.+++....+..+. ...
T Consensus 154 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~ 233 (337)
T 1pby_B 154 RDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAM 233 (337)
T ss_dssp SSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEE
T ss_pred CeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceE
Confidence 889999999888776554332 000
Q ss_pred eEEEecCCCeEEEEeCCCCe-EEEEecCCcEEEEeCCCCcc
Q psy7433 168 SFFKHIGQGVTQLHVDGGSR-LFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 168 ~~~~~~~~~v~~~~~~~~~~-l~s~~~d~~i~iw~~~~~~~ 207 (213)
.....+...+.+++|+|++. ++++ ++.|++||+.+++.
T Consensus 234 ~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~ 272 (337)
T 1pby_B 234 REVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNAS 272 (337)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEE
T ss_pred eecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcC
Confidence 00112223566799999764 5555 79999999987643
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=99.75 E-value=8.5e-16 Score=114.86 Aligned_cols=189 Identities=13% Similarity=0.174 Sum_probs=123.0
Q ss_pred ccCceEEEEEeCCCCeEEEeeccC-CCccEEEEeCCCc-ccccceeeeeeecCCceEEEEecCCCEEEEEc-CCCcEEEE
Q psy7433 6 HNKITSDFVFLGSCSLVATAGHSS-ESKNVCLWDSLLP-QKKALVQAFVCHDQGASSLVFAPQHQLLISAG-KKGDICVI 82 (213)
Q Consensus 6 h~~~v~~~~~~~~~~~l~~~g~~s-~~~~i~iwd~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~iw 82 (213)
+...+..++|+|++++|++++... .++.|.+|+++.. .....+.....+......+++ ++++|++++ .++.+.+|
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVF 125 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEE
Confidence 456677899999999998884200 2379999998431 112333333334455667777 777777665 57899999
Q ss_pred eccCceEEEec------cc--------CCCCeeEEEecCCCCEEEEecC-CCcee-------------------------
Q psy7433 83 DLRQRVIRSRF------NA--------HESPVKCLAIDPHEEFFVTGAG-DGDIK------------------------- 122 (213)
Q Consensus 83 d~~~~~~~~~~------~~--------~~~~i~~~~~~~~~~~l~~~~~-~~~i~------------------------- 122 (213)
++.....+..+ .+ +...+.+++|+|+++++++++. ++.+.
T Consensus 126 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~ 205 (361)
T 3scy_A 126 PIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAF 205 (361)
T ss_dssp EBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEE
T ss_pred EeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccce
Confidence 99754322111 11 1223578999999997665543 33322
Q ss_pred -----eceEEEEEccCCceEEEec-CCCcEEEEEccCCee--eeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEec
Q psy7433 123 -----SPVKCLAIDPHEEFFVTGA-GDGDIKVWSLSGNHL--LYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGA 193 (213)
Q Consensus 123 -----~~v~~~~~~~~~~~l~~~~-~dg~i~v~d~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~ 193 (213)
..+..++|+|+|+++++++ .++.|.+||+.+++. +..+..... +......++|+|++. |+++..
T Consensus 206 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~-------~~~~~~~i~~spdg~~l~v~~~ 278 (361)
T 3scy_A 206 KVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTV-------NAQGSGDIHLSPDGKYLYASNR 278 (361)
T ss_dssp ECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSS-------CCCCEEEEEECTTSSEEEEEEC
T ss_pred ecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCC-------CCCCcccEEECCCCCEEEEECC
Confidence 2356789999999777766 689999999987654 222322111 014568999999875 555554
Q ss_pred --CCcEEEEeCC
Q psy7433 194 --DGSMKVRQLP 203 (213)
Q Consensus 194 --d~~i~iw~~~ 203 (213)
++.|.+|++.
T Consensus 279 ~~~~~i~v~~~~ 290 (361)
T 3scy_A 279 LKADGVAIFKVD 290 (361)
T ss_dssp SSSCEEEEEEEC
T ss_pred CCCCEEEEEEEc
Confidence 5899999996
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=99.75 E-value=1.9e-15 Score=109.40 Aligned_cols=185 Identities=9% Similarity=0.176 Sum_probs=134.2
Q ss_pred ccCceEEEEEe-CCCCeEEEeeccCCCccEEEEeCCCcccccceeeeee-ecCCceEEEEecCCCEEEEEcCCCcEEEEe
Q psy7433 6 HNKITSDFVFL-GSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVC-HDQGASSLVFAPQHQLLISAGKKGDICVID 83 (213)
Q Consensus 6 h~~~v~~~~~~-~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd 83 (213)
|...+.++++. ++++++++.. ..++.|.+||. ..+.+..+.. +...+..++++|+++++++...++.|.+||
T Consensus 75 ~~~~p~~i~~~~~~g~l~v~~~--~~~~~i~~~d~----~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~ 148 (286)
T 1q7f_A 75 QLLYPNRVAVVRNSGDIIVTER--SPTHQIQIYNQ----YGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFD 148 (286)
T ss_dssp CBSSEEEEEEETTTTEEEEEEC--GGGCEEEEECT----TSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred cccCceEEEEEcCCCeEEEEcC--CCCCEEEEECC----CCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEc
Confidence 44678899994 6777777661 12789999994 3344444432 234678999999999888888889999999
Q ss_pred ccCceEEEecc--cCCCCeeEEEecCCCCEEEEecCCCcee------------------eceEEEEEccCCceEEEecCC
Q psy7433 84 LRQRVIRSRFN--AHESPVKCLAIDPHEEFFVTGAGDGDIK------------------SPVKCLAIDPHEEFFVTGAGD 143 (213)
Q Consensus 84 ~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------~~v~~~~~~~~~~~l~~~~~d 143 (213)
.. ++.+..+. .+...+..++++|+++.+++...++.+. ..+..++++|+|+++++...+
T Consensus 149 ~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~ 227 (286)
T 1q7f_A 149 QN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHN 227 (286)
T ss_dssp TT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSS
T ss_pred CC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCC
Confidence 64 55555543 3345688999999998777766666554 357889999999988888777
Q ss_pred C-cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCc
Q psy7433 144 G-DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 144 g-~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~ 206 (213)
+ .|.+||. +++.+..+..+.. ...+.+++++|++.|+.++.|+.|++|++....
T Consensus 228 ~~~i~~~~~-~g~~~~~~~~~~~--------~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~~~~ 282 (286)
T 1q7f_A 228 NFNLTIFTQ-DGQLISALESKVK--------HAQCFDVALMDDGSVVLASKDYRLYIYRYVQLA 282 (286)
T ss_dssp SCEEEEECT-TSCEEEEEEESSC--------CSCEEEEEEETTTEEEEEETTTEEEEEECSCCC
T ss_pred CEEEEEECC-CCCEEEEEcccCC--------CCcceeEEECCCCcEEEECCCCeEEEEEccccc
Confidence 6 9999995 4555555544321 134789999998876666789999999987643
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=99.73 E-value=2.3e-16 Score=118.33 Aligned_cols=184 Identities=10% Similarity=0.081 Sum_probs=123.3
Q ss_pred eEEEEEeCCCCe--EEEee------ccC----CCccEEEEeCCCcccccceeeeee----ecCCceEEEEecCCCEEEEE
Q psy7433 10 TSDFVFLGSCSL--VATAG------HSS----ESKNVCLWDSLLPQKKALVQAFVC----HDQGASSLVFAPQHQLLISA 73 (213)
Q Consensus 10 v~~~~~~~~~~~--l~~~g------~~s----~~~~i~iwd~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~ 73 (213)
+..++|+|+|++ ++++. ++. .++.+.+|+++. .++....+.. +...+.+++|+|+|++|+++
T Consensus 85 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~ 162 (365)
T 1jof_A 85 PRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSE--TGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSA 162 (365)
T ss_dssp GGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECT--TCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEE
T ss_pred CccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCC--CCcCcceEeeEEeCCCCcceEEEECCCCCEEEEE
Confidence 455789999994 44541 001 578999999842 2333323321 34578999999999988876
Q ss_pred c-CCCcEEEEecc-CceEE--Eecc--cCCCCeeEEEecCCCCEEEEecC-CCcee------------------------
Q psy7433 74 G-KKGDICVIDLR-QRVIR--SRFN--AHESPVKCLAIDPHEEFFVTGAG-DGDIK------------------------ 122 (213)
Q Consensus 74 ~-~d~~v~iwd~~-~~~~~--~~~~--~~~~~i~~~~~~~~~~~l~~~~~-~~~i~------------------------ 122 (213)
+ .++.|.+||+. +++.. ..+. .+...+..++|+|+++++++++. ++.+.
T Consensus 163 ~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~ 242 (365)
T 1jof_A 163 DLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPG 242 (365)
T ss_dssp ETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTT
T ss_pred cCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCC
Confidence 5 36799999998 66542 2333 23566899999999998877664 33221
Q ss_pred ----e-------ceEEEE-EccCCceEEEecCCC------cEEEEEcc-CCeeee---eecCCCCceeEEEecCCCeEEE
Q psy7433 123 ----S-------PVKCLA-IDPHEEFFVTGAGDG------DIKVWSLS-GNHLLY---NFPGEHARSSFFKHIGQGVTQL 180 (213)
Q Consensus 123 ----~-------~v~~~~-~~~~~~~l~~~~~dg------~i~v~d~~-~~~~~~---~~~~~~~~~~~~~~~~~~v~~~ 180 (213)
. .+..++ |+|+|++|++++.+. .|.+|++. +++... ....+. ..+..+
T Consensus 243 ~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~----------~~~~~~ 312 (365)
T 1jof_A 243 IPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPT----------SGGHSN 312 (365)
T ss_dssp CCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSS----------CCTTCC
T ss_pred cCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCC----------CCcccc
Confidence 0 366789 999999887765432 89999996 454432 122221 345667
Q ss_pred EeCC---C-CeEEEEec-CCcEEEEeCCCC
Q psy7433 181 HVDG---G-SRLFSCGA-DGSMKVRQLPDR 205 (213)
Q Consensus 181 ~~~~---~-~~l~s~~~-d~~i~iw~~~~~ 205 (213)
+|+| + ++|++++. ++.|++|++...
T Consensus 313 a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 313 AVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp CEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred eecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 8888 4 46777765 489999998765
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.73 E-value=3.5e-17 Score=129.79 Aligned_cols=181 Identities=7% Similarity=-0.044 Sum_probs=123.0
Q ss_pred ccc-CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCE-EEEEcCCCcEEEE
Q psy7433 5 CHN-KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQL-LISAGKKGDICVI 82 (213)
Q Consensus 5 ~h~-~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~v~iw 82 (213)
.|. ..+.+++|+|+ ++++++.....+....+|.++....+... .+. ........+|+|+++. +++.+.++.+.+|
T Consensus 61 ~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~-~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~ 137 (582)
T 3o4h_A 61 REPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RLE-AVKPMRILSGVDTGEAVVFTGATEDRVALY 137 (582)
T ss_dssp SSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCE-ECT-TSCSBEEEEEEECSSCEEEEEECSSCEEEE
T ss_pred cccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccc-ccc-CCCCceeeeeCCCCCeEEEEecCCCCceEE
Confidence 344 68999999999 77776621012455677665320012221 222 1223456788888853 3333344455699
Q ss_pred eccCceEEEecccCCCCeeEEEecCCCCEEEEecCC----Ccee----------------eceEEEEEccCCceEEEecC
Q psy7433 83 DLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGD----GDIK----------------SPVKCLAIDPHEEFFVTGAG 142 (213)
Q Consensus 83 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~----~~i~----------------~~v~~~~~~~~~~~l~~~~~ 142 (213)
|+.+++.......+ . .+++|+|||+.++.++.+ ..+. ..+..++|+|||++|+++..
T Consensus 138 d~~~g~~~~l~~~~-~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~ 214 (582)
T 3o4h_A 138 ALDGGGLRELARLP-G--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLET 214 (582)
T ss_dssp EEETTEEEEEEEES-S--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEEC
T ss_pred EccCCcEEEeecCC-C--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccC
Confidence 99988765544432 2 889999999999977765 3343 56789999999999998888
Q ss_pred CC--cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEE--------eCCCCe-EEEEecCCcEEEEeC
Q psy7433 143 DG--DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLH--------VDGGSR-LFSCGADGSMKVRQL 202 (213)
Q Consensus 143 dg--~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--------~~~~~~-l~s~~~d~~i~iw~~ 202 (213)
++ .|++||+.+++.. .+..+. ..+..+. |+|++. +++++.|+.+++|++
T Consensus 215 ~~~~~i~~~d~~~~~~~-~~~~~~----------~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 215 AREARLVTVDPRDGSVE-DLELPS----------KDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp SSCEEEEEECTTTCCEE-ECCCSC----------SHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred CCeeEEEEEcCCCCcEE-EccCCC----------cChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 88 8999999888776 555543 2344444 999765 678889999999999
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.73 E-value=1.9e-16 Score=128.95 Aligned_cols=185 Identities=8% Similarity=0.040 Sum_probs=125.2
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCC-----ceEEEEecCCCEEEEEcCC------
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQG-----ASSLVFAPQHQLLISAGKK------ 76 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l~~~~~d------ 76 (213)
....++.|+|++++++++ |+.|++||+. +++....+..|... ...+.|||||++|+.++.+
T Consensus 17 ~~~~~~~w~~dg~~~~~~-----~~~i~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~ 88 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ-----ENNILVFNAE---YGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRH 88 (740)
T ss_dssp CCCCCEEECSSSEEEEEE-----TTEEEEEETT---TCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSS
T ss_pred ccccccEECCCCcEEEEc-----CCcEEEEECC---CCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEE
Confidence 346689999999888875 7899999984 44444445554432 2448899999999988765
Q ss_pred ---CcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee------------------ece----------
Q psy7433 77 ---GDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------SPV---------- 125 (213)
Q Consensus 77 ---~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------~~v---------- 125 (213)
+.+.+||+.+++.. .+..+...+...+|+|||+.|+.+.. +.+. ..+
T Consensus 89 ~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ 166 (740)
T 4a5s_A 89 SYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVWN-NDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYE 166 (740)
T ss_dssp CEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEET-TEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHH
T ss_pred ccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEEC-CeEEEEECCCCceEEEcCCCCccceecCccccccc
Confidence 56779999998754 45667788999999999999988753 3333 011
Q ss_pred -------EEEEEccCCceEEEecCCC------------------------------------cEEEEEccC---Ce--ee
Q psy7433 126 -------KCLAIDPHEEFFVTGAGDG------------------------------------DIKVWSLSG---NH--LL 157 (213)
Q Consensus 126 -------~~~~~~~~~~~l~~~~~dg------------------------------------~i~v~d~~~---~~--~~ 157 (213)
..+.|||||++|+.++.|. .|++||+.+ ++ ..
T Consensus 167 ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~ 246 (740)
T 4a5s_A 167 EEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATS 246 (740)
T ss_dssp HHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCE
T ss_pred chhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceE
Confidence 2488999999988875332 356666665 42 11
Q ss_pred eeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEec----CCcEEEEeCCCCc
Q psy7433 158 YNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGA----DGSMKVRQLPDRD 206 (213)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~----d~~i~iw~~~~~~ 206 (213)
..+..... ...+...+..++|+|++. ++.... +..|++||+.+++
T Consensus 247 ~~l~~~~~----~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 247 IQITAPAS----MLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp EEECCCHH----HHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred EEecCCcc----CCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 12221000 000225689999999886 443322 3379999998875
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=2.8e-14 Score=105.51 Aligned_cols=186 Identities=13% Similarity=0.119 Sum_probs=135.7
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCC------------------------ccEEEEeCCCcccccceeeee-eecCCceEE
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSES------------------------KNVCLWDSLLPQKKALVQAFV-CHDQGASSL 61 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~------------------------~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~ 61 (213)
-+.+.+++++|+|+++++. ..+ +.|.+||. .+++.+..+. .+......+
T Consensus 23 l~~v~~va~d~~G~l~v~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~---~~g~~~~~~~~~~~~~p~gi 96 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFH---RGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDP---NNAEILQSSGKNLFYLPHGL 96 (329)
T ss_dssp CSCEEEEEECTTCCEEEEE---CTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECT---TTCCEEEEECTTTCSSEEEE
T ss_pred cCCceEEEECCCCCEEEEe---CCCCeEEeeccCcceeecccccccccCCcEEEEEC---CCCeEEeccCCCccCCceEE
Confidence 4679999999999999887 445 47999997 3444444432 233467899
Q ss_pred EEecCCCEEEEEcCCCcEEEEeccCce-EEEec---------ccCCCCeeEEEecC-CCCEEEEec-CCCcee-------
Q psy7433 62 VFAPQHQLLISAGKKGDICVIDLRQRV-IRSRF---------NAHESPVKCLAIDP-HEEFFVTGA-GDGDIK------- 122 (213)
Q Consensus 62 ~~~~~~~~l~~~~~d~~v~iwd~~~~~-~~~~~---------~~~~~~i~~~~~~~-~~~~l~~~~-~~~~i~------- 122 (213)
+++|+++++++...++.|++||..... .+..+ ..+......++++| ++..+++.+ .++.+.
T Consensus 97 a~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~ 176 (329)
T 3fvz_A 97 SIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGK 176 (329)
T ss_dssp EECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSC
T ss_pred EECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCC
Confidence 999999988888889999999986542 34444 22334688999999 788777775 566664
Q ss_pred ---------e----------ceEEEEEccC-CceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEe
Q psy7433 123 ---------S----------PVKCLAIDPH-EEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHV 182 (213)
Q Consensus 123 ---------~----------~v~~~~~~~~-~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 182 (213)
. .+..++++|+ +.++++...++.|++||..+++.+..+..... +..+..+++
T Consensus 177 ~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~--------~~~~~~~~~ 248 (329)
T 3fvz_A 177 FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASF--------GRNVFAISY 248 (329)
T ss_dssp EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTT--------TTCEEEEEE
T ss_pred EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEecccc--------CCCcceeee
Confidence 1 1789999998 77888888899999999988888887754321 256778888
Q ss_pred CCCCe-EEEE-------ecCCcEEEEeCCCCcc
Q psy7433 183 DGGSR-LFSC-------GADGSMKVRQLPDRDA 207 (213)
Q Consensus 183 ~~~~~-l~s~-------~~d~~i~iw~~~~~~~ 207 (213)
+| +. +.+. ..+..|++|+..+++.
T Consensus 249 ~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~ 280 (329)
T 3fvz_A 249 IP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEI 280 (329)
T ss_dssp ET-TEEEEEECCCCTTCSCCCCEEEEETTTCCE
T ss_pred cC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeE
Confidence 88 33 2222 2345899999887753
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=99.71 E-value=3.4e-15 Score=111.96 Aligned_cols=187 Identities=10% Similarity=0.088 Sum_probs=121.1
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeee-cCCceEEEEecCCCE--EEEEc----------
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCH-DQGASSLVFAPQHQL--LISAG---------- 74 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~--l~~~~---------- 74 (213)
..+..++|+|++++|+++ +.+ .|.+|++. ..++........ .+....++|+|++++ +++++
T Consensus 40 ~~~~~~a~spdg~~l~~~---~~~-~v~~~~~~--~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~ 113 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGA---AMK-KWSSFAVK--SPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANP 113 (365)
T ss_dssp CCCSEEEECTTSSEEEEE---EBT-EEEEEEEE--ETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEE
T ss_pred CCCcEEEECCCCCEEEEE---ccc-eEEEEEEC--CCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccce
Confidence 467889999999999888 345 89999983 133333222211 134667899999984 45553
Q ss_pred ---CCCcEEEEecc-CceEEEecc----cCCCCeeEEEecCCCCEEEEecC-CCcee----------------------e
Q psy7433 75 ---KKGDICVIDLR-QRVIRSRFN----AHESPVKCLAIDPHEEFFVTGAG-DGDIK----------------------S 123 (213)
Q Consensus 75 ---~d~~v~iwd~~-~~~~~~~~~----~~~~~i~~~~~~~~~~~l~~~~~-~~~i~----------------------~ 123 (213)
.++.+.+|++. +++....+. .+...+.+++|+|++++++++.. ++.+. .
T Consensus 114 ~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~ 193 (365)
T 1jof_A 114 FYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGD 193 (365)
T ss_dssp ESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTC
T ss_pred eecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCC
Confidence 68899999997 455443332 24567899999999998877643 22222 1
Q ss_pred ceEEEEEccCCceEEEecC-CCcEEEEEcc--CCeee---eeecCCCCceeEEEecCC------CeEEEE-eCCCCe-EE
Q psy7433 124 PVKCLAIDPHEEFFVTGAG-DGDIKVWSLS--GNHLL---YNFPGEHARSSFFKHIGQ------GVTQLH-VDGGSR-LF 189 (213)
Q Consensus 124 ~v~~~~~~~~~~~l~~~~~-dg~i~v~d~~--~~~~~---~~~~~~~~~~~~~~~~~~------~v~~~~-~~~~~~-l~ 189 (213)
.+..++|+|+|+++++++. ++.|.+|++. +++.. ..+...... +..+.. .+..++ |+|++. |+
T Consensus 194 ~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~i~~~spdG~~l~ 270 (365)
T 1jof_A 194 HPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPG---IPDRDPETGKGLYRADVCALTFSGKYMF 270 (365)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTT---CCCBCTTTSSBSEEEEEEEECTTSSEEE
T ss_pred CCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCC---cCCcccccccccccccEEEECCCCCEEE
Confidence 2677899999998877765 6899999875 44432 112111000 000001 478899 999874 55
Q ss_pred EEec-CC-----cEEEEeCC
Q psy7433 190 SCGA-DG-----SMKVRQLP 203 (213)
Q Consensus 190 s~~~-d~-----~i~iw~~~ 203 (213)
++.. ++ .|.+|++.
T Consensus 271 v~~~~~~~~~~~~i~v~~~~ 290 (365)
T 1jof_A 271 ASSRANKFELQGYIAGFKLR 290 (365)
T ss_dssp EEEEESSTTSCCEEEEEEEC
T ss_pred EECCCCCCCCCCeEEEEEEC
Confidence 5543 23 89999996
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.7e-15 Score=114.05 Aligned_cols=180 Identities=11% Similarity=0.021 Sum_probs=119.5
Q ss_pred EEEeCCCCeEEEeeccCCCc--cEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEE
Q psy7433 13 FVFLGSCSLVATAGHSSESK--NVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIR 90 (213)
Q Consensus 13 ~~~~~~~~~l~~~g~~s~~~--~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~ 90 (213)
.+|+|||+.|+.+. ..++ .|.+||+ ..++.......+...+..+.|+|+++.|+.++.++.|++||+.+++..
T Consensus 41 ~~~SpDg~~l~~~~--~~~g~~~l~~~d~---~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~ 115 (388)
T 3pe7_A 41 KCFTRDGSKLLFGG--AFDGPWNYYLLDL---NTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEEN 115 (388)
T ss_dssp CCBCTTSCEEEEEE--CTTSSCEEEEEET---TTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEE
T ss_pred ccCCCCCCEEEEEE--cCCCCceEEEEeC---CCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcce
Confidence 78999999999884 2356 4888887 344444444445445556789999999999998999999999998766
Q ss_pred EecccCCCCeeEE--EecCCCCEEEEec----------------------CCCcee----------------eceEEEEE
Q psy7433 91 SRFNAHESPVKCL--AIDPHEEFFVTGA----------------------GDGDIK----------------SPVKCLAI 130 (213)
Q Consensus 91 ~~~~~~~~~i~~~--~~~~~~~~l~~~~----------------------~~~~i~----------------~~v~~~~~ 130 (213)
..+..+...+... .++|+++.++... .+..+. ..+..+.|
T Consensus 116 ~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~ 195 (388)
T 3pe7_A 116 VVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIY 195 (388)
T ss_dssp EEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEE
T ss_pred eeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEE
Confidence 6555444444333 3478888776321 112221 45788999
Q ss_pred cc-CCceEEEecCC------CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEec-CC----cE
Q psy7433 131 DP-HEEFFVTGAGD------GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGA-DG----SM 197 (213)
Q Consensus 131 ~~-~~~~l~~~~~d------g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~-d~----~i 197 (213)
+| +|+.|+....+ ..|.++|+..++.. .+..+.. +..+....|+|++. |+..+. ++ .|
T Consensus 196 sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~--------~~~~~~~~~spdg~~l~~~~~~~~~~~~~l 266 (388)
T 3pe7_A 196 RPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMR-KVKTHAE--------GESCTHEFWVPDGSALVYVSYLKGSPDRFI 266 (388)
T ss_dssp ETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCE-ESCCCCT--------TEEEEEEEECTTSSCEEEEEEETTCCCEEE
T ss_pred CCCCCCEEEEEEecCCCCCcceEEEEeCCCCceE-EeeeCCC--------CcccccceECCCCCEEEEEecCCCCCcceE
Confidence 99 99988776653 36777787654432 3322221 02477889999764 544433 22 39
Q ss_pred EEEeCCCCc
Q psy7433 198 KVRQLPDRD 206 (213)
Q Consensus 198 ~iw~~~~~~ 206 (213)
++||+.+++
T Consensus 267 ~~~d~~~g~ 275 (388)
T 3pe7_A 267 YSADPETLE 275 (388)
T ss_dssp EEECTTTCC
T ss_pred EEEecCCCc
Confidence 999998775
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.70 E-value=1.9e-15 Score=121.41 Aligned_cols=185 Identities=10% Similarity=0.032 Sum_probs=127.0
Q ss_pred ccCceEEEEEeCCCCeEEEeeccCCC----------ccEEEEeCCCcc--c-ccceeeee-eecCCceEEEEecCCCEEE
Q psy7433 6 HNKITSDFVFLGSCSLVATAGHSSES----------KNVCLWDSLLPQ--K-KALVQAFV-CHDQGASSLVFAPQHQLLI 71 (213)
Q Consensus 6 h~~~v~~~~~~~~~~~l~~~g~~s~~----------~~i~iwd~~~~~--~-~~~~~~~~-~~~~~v~~~~~~~~~~~l~ 71 (213)
|...+.+++|+|||+.|+++ +.+ ..|++||+.... . . ....+. .+...+..++|+|||++|+
T Consensus 128 ~~~~~~~~~~spDg~~l~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~SpDG~~la 203 (662)
T 3azo_A 128 GGLRWADPVLLPERGEVWCM---AEEFTGEGPSDVRRFLAAVPLDGSAAADRS-AVRELSDDAHRFVTGPRLSPDGRQAV 203 (662)
T ss_dssp TCEEEEEEEEETTTTEEEEE---EEEECSSSTTCEEEEEEEEETTSTTTTCGG-GSEESSCSCSSEECCCEECTTSSEEE
T ss_pred CCccccCcEECCCCCEEEEE---EecccCCCCCCceeEEEEEECCCCccccCC-ceeEEEecCCCcccCceECCCCCEEE
Confidence 56788999999999999988 444 589999984210 0 2 233444 4456678899999999998
Q ss_pred EEcCC--------CcEEEEecc-Cc---eEEEecccCCCCeeEEEecCCCCEEEEecCCCc--ee---------------
Q psy7433 72 SAGKK--------GDICVIDLR-QR---VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGD--IK--------------- 122 (213)
Q Consensus 72 ~~~~d--------~~v~iwd~~-~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~--i~--------------- 122 (213)
.++.+ ..|.+||+. ++ +.......+...+..++|+|++++++++..++. +.
T Consensus 204 ~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~ 283 (662)
T 3azo_A 204 WLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRR 283 (662)
T ss_dssp EEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCC
T ss_pred EEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccc
Confidence 77754 479999998 56 444444445678999999999997777777763 32
Q ss_pred --e--------ceEEEEEccCCceEEEecCCCcEEEE--EccCCeeeeeecCCCCceeEEEecCCCeEEE-EeCCCCeE-
Q psy7433 123 --S--------PVKCLAIDPHEEFFVTGAGDGDIKVW--SLSGNHLLYNFPGEHARSSFFKHIGQGVTQL-HVDGGSRL- 188 (213)
Q Consensus 123 --~--------~v~~~~~~~~~~~l~~~~~dg~i~v~--d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~l- 188 (213)
. .+..++|+|+++++++++. +.+++| |+..++ +..+..+. ..+..+ +++++..+
T Consensus 284 ~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~----------~~~~~~~s~~~~~~~~ 351 (662)
T 3azo_A 284 EEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAAGPW----------TEWAATLTVSGTRAVG 351 (662)
T ss_dssp SSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECCSSC----------CEEEEEEEEETTEEEE
T ss_pred cccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEecCCC----------CeEEEEEecCCCEEEE
Confidence 0 1467888999999999998 999999 544444 55555543 456666 55544443
Q ss_pred EEEecCC--cEEEEeCCCCc
Q psy7433 189 FSCGADG--SMKVRQLPDRD 206 (213)
Q Consensus 189 ~s~~~d~--~i~iw~~~~~~ 206 (213)
++.+.+. .|.++|+.+++
T Consensus 352 ~~~~~~~~~~i~~~d~~~g~ 371 (662)
T 3azo_A 352 VAASPRTAYEVVELDTVTGR 371 (662)
T ss_dssp EEEETTEEEEEEEEETTTCC
T ss_pred EEcCCCCCCEEEEEECCCCc
Confidence 4444454 45555665543
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.4e-14 Score=105.43 Aligned_cols=180 Identities=13% Similarity=0.141 Sum_probs=130.4
Q ss_pred cccCceEEEEEeCCCC-eEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEe
Q psy7433 5 CHNKITSDFVFLGSCS-LVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVID 83 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~-~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd 83 (213)
.+.....+++|+|+++ ++++. ..++.|..|+.. .. ...+..+...+.+++++++++++++...++.|.+||
T Consensus 25 ~~~~~~eg~~~d~~g~~l~~~~---~~~~~i~~~~~~---~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d 96 (296)
T 3e5z_A 25 DGFTWTEGPVYVPARSAVIFSD---VRQNRTWAWSDD---GQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQR 96 (296)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEE---GGGTEEEEEETT---SC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEEC
T ss_pred cCCccccCCeEeCCCCEEEEEe---CCCCEEEEEECC---CC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEc
Confidence 4556678999999998 66666 578999999973 33 455555667789999999999888877778999999
Q ss_pred ccCceEEEeccc----CCCCeeEEEecCCCCEEEE----ecC-------------CCcee---------------eceEE
Q psy7433 84 LRQRVIRSRFNA----HESPVKCLAIDPHEEFFVT----GAG-------------DGDIK---------------SPVKC 127 (213)
Q Consensus 84 ~~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~----~~~-------------~~~i~---------------~~v~~ 127 (213)
..+++....... ....+..++++|+++.+++ +.. .+.+. ..+..
T Consensus 97 ~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~g 176 (296)
T 3e5z_A 97 EPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGTLSAPIRDRVKPNG 176 (296)
T ss_dssp STTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSCEEEEECCCSSEEE
T ss_pred CCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCCCCEEEeecCCCCCcc
Confidence 988765433221 1234678999999998886 321 12222 45688
Q ss_pred EEEccCCceEEEecCCCcEEEEEcc-CCee---eeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCC
Q psy7433 128 LAIDPHEEFFVTGAGDGDIKVWSLS-GNHL---LYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLP 203 (213)
Q Consensus 128 ~~~~~~~~~l~~~~~dg~i~v~d~~-~~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~ 203 (213)
++|+|+++.+++.+.++.|.+||+. ++.. ...+..+ ...+.++++++++.|..+. ++.|.+|+..
T Consensus 177 i~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~----------~~~p~~i~~d~~G~l~v~~-~~~v~~~~~~ 245 (296)
T 3e5z_A 177 LAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVE----------PGKTDGLRVDAGGLIWASA-GDGVHVLTPD 245 (296)
T ss_dssp EEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCS----------SSCCCSEEEBTTSCEEEEE-TTEEEEECTT
T ss_pred EEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCC----------CCCCCeEEECCCCCEEEEc-CCeEEEECCC
Confidence 9999999988777888999999996 4433 2223111 1456778999887766666 8889999976
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=99.69 E-value=5.7e-14 Score=101.63 Aligned_cols=182 Identities=8% Similarity=0.131 Sum_probs=131.8
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeee------ecCCceEEEEe-cCCCEEEEEcC-C
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVC------HDQGASSLVFA-PQHQLLISAGK-K 76 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~------~~~~v~~~~~~-~~~~~l~~~~~-d 76 (213)
++-..+.+++++|+++++++. ..++.|.+||.+ ...+..+.. +...+..++++ ++++++++... +
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~---~~~~~i~~~d~~----g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~ 99 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVAD---TNNHRIQIFDKE----GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPT 99 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEE---GGGTEEEEECTT----SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGG
T ss_pred CccCCCceEEECCCCCEEEEE---CCCCEEEEECCC----CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCC
Confidence 456779999999999988887 578999999973 334444432 33567899995 67766666543 7
Q ss_pred CcEEEEeccCceEEEeccc-CCCCeeEEEecCCCCEEEEecCCCcee------------------eceEEEEEccCCceE
Q psy7433 77 GDICVIDLRQRVIRSRFNA-HESPVKCLAIDPHEEFFVTGAGDGDIK------------------SPVKCLAIDPHEEFF 137 (213)
Q Consensus 77 ~~v~iwd~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------~~v~~~~~~~~~~~l 137 (213)
+.|.+|| .+++.+..+.. ....+..++++|+++.+++...++.+. ..+..++++|+++++
T Consensus 100 ~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~ 178 (286)
T 1q7f_A 100 HQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIF 178 (286)
T ss_dssp CEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEE
T ss_pred CEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCEE
Confidence 8999999 56666665543 345688999999998777766666554 347889999999988
Q ss_pred EEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeE-EEEecCC-cEEEEeCC
Q psy7433 138 VTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRL-FSCGADG-SMKVRQLP 203 (213)
Q Consensus 138 ~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l-~s~~~d~-~i~iw~~~ 203 (213)
++...++.|++||.. ++.+..+..+.. ...+..+++++++.+ ++...++ .|.+|+..
T Consensus 179 v~~~~~~~i~~~~~~-g~~~~~~~~~g~--------~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~ 237 (286)
T 1q7f_A 179 ISDNRAHCVKVFNYE-GQYLRQIGGEGI--------TNYPIGVGINSNGEILIADNHNNFNLTIFTQD 237 (286)
T ss_dssp EEEGGGTEEEEEETT-CCEEEEESCTTT--------SCSEEEEEECTTCCEEEEECSSSCEEEEECTT
T ss_pred EEECCCCEEEEEcCC-CCEEEEEccCCc--------cCCCcEEEECCCCCEEEEeCCCCEEEEEECCC
Confidence 888889999999974 455555543211 146889999987664 4555565 99999964
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.69 E-value=5.2e-16 Score=125.86 Aligned_cols=178 Identities=10% Similarity=0.023 Sum_probs=122.1
Q ss_pred ceEEEEEeCCCCeEEEeeccCC---------CccEEEEeCCCcccccce--eeeeeecCCceEEEEecCCCEEEEEcCCC
Q psy7433 9 ITSDFVFLGSCSLVATAGHSSE---------SKNVCLWDSLLPQKKALV--QAFVCHDQGASSLVFAPQHQLLISAGKKG 77 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s~---------~~~i~iwd~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 77 (213)
.+.+++|+|||++|+++ +. ++.|++||+. .++.+ ..+ ...+..++|||+|+.|+.+. ++
T Consensus 61 ~~~~~~~SpDg~~la~~---~~~~~~~~~s~~~~i~~~d~~---~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~ 130 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLE---SDYSKLWRYSYTATYYIYDLS---NGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QN 130 (719)
T ss_dssp TCSEEEECTTSSEEEEE---EEEEECSSSCEEEEEEEEETT---TTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TT
T ss_pred ceeeEEECCCCCeEEEE---ecCceeEEeecceEEEEEECC---CCccccceec---CcccccceECCCCCEEEEEE-CC
Confidence 38899999999999988 33 6899999984 33321 122 24688999999999999885 68
Q ss_pred cEEEEeccCceEEEecc-cCCCC-----------------eeEEEecCCCCEEEEecCCC--------------------
Q psy7433 78 DICVIDLRQRVIRSRFN-AHESP-----------------VKCLAIDPHEEFFVTGAGDG-------------------- 119 (213)
Q Consensus 78 ~v~iwd~~~~~~~~~~~-~~~~~-----------------i~~~~~~~~~~~l~~~~~~~-------------------- 119 (213)
.|++||+.+++..+... ++... ..+++|+|||+.|++++.+.
T Consensus 131 ~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~ 210 (719)
T 1z68_A 131 NIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTI 210 (719)
T ss_dssp EEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEE
T ss_pred eEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccce
Confidence 99999998887654332 22221 25899999999999887542
Q ss_pred --------------cee-------------------------eceEEEEEccCCceEEEecCC----CcEEEEE----cc
Q psy7433 120 --------------DIK-------------------------SPVKCLAIDPHEEFFVTGAGD----GDIKVWS----LS 152 (213)
Q Consensus 120 --------------~i~-------------------------~~v~~~~~~~~~~~l~~~~~d----g~i~v~d----~~ 152 (213)
.+. ..+..++|+||++++++.... ..|.+|| +.
T Consensus 211 ~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~ 290 (719)
T 1z68_A 211 NIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQ 290 (719)
T ss_dssp EEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSS
T ss_pred eecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCC
Confidence 111 135889999998877764332 2488899 77
Q ss_pred CCeeeeee----cCCCCceeEEEecCCCeE-----EEEeCCCCe-EE--EEecCC--cEEEEeCCCCc
Q psy7433 153 GNHLLYNF----PGEHARSSFFKHIGQGVT-----QLHVDGGSR-LF--SCGADG--SMKVRQLPDRD 206 (213)
Q Consensus 153 ~~~~~~~~----~~~~~~~~~~~~~~~~v~-----~~~~~~~~~-l~--s~~~d~--~i~iw~~~~~~ 206 (213)
+++....+ ..+. ..+. .+.|+|++. ++ +...+| .|.+|++.+++
T Consensus 291 ~g~~~~~~~~~~~~~~----------~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~ 348 (719)
T 1z68_A 291 TWDCPKTQEHIEESRT----------GWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN 348 (719)
T ss_dssp SEECCGGGEEEEECSS----------SCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT
T ss_pred CCceEEEEecccccCC----------ceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc
Confidence 77665544 2332 3344 678999764 33 344555 56667776543
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=1.8e-14 Score=106.51 Aligned_cols=187 Identities=12% Similarity=0.115 Sum_probs=132.7
Q ss_pred ccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeee---------eeecCCceEEEEec-CCCEEEEEc-
Q psy7433 6 HNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAF---------VCHDQGASSLVFAP-QHQLLISAG- 74 (213)
Q Consensus 6 h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~---------~~~~~~v~~~~~~~-~~~~l~~~~- 74 (213)
+-..+..++++|+|+++++. ..++.|++||.+. ....+..+ ..+......++++| +++++++.+
T Consensus 89 ~~~~p~gia~d~~g~l~v~d---~~~~~v~~~~~~g--~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~ 163 (329)
T 3fvz_A 89 LFYLPHGLSIDTDGNYWVTD---VALHQVFKLDPHS--KEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGY 163 (329)
T ss_dssp TCSSEEEEEECTTSCEEEEE---TTTTEEEEECTTC--SSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECS
T ss_pred ccCCceEEEECCCCCEEEEE---CCCCEEEEEeCCC--CeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCC
Confidence 33568899999999988887 6789999999731 11133333 22334678999999 788888876
Q ss_pred CCCcEEEEeccCceEEEecccCC----------CCeeEEEecCC-CCEEEEecCCCcee-------------------ec
Q psy7433 75 KKGDICVIDLRQRVIRSRFNAHE----------SPVKCLAIDPH-EEFFVTGAGDGDIK-------------------SP 124 (213)
Q Consensus 75 ~d~~v~iwd~~~~~~~~~~~~~~----------~~i~~~~~~~~-~~~l~~~~~~~~i~-------------------~~ 124 (213)
.++.|++|| .+++.+..+.... .....++++|+ +..+++...++.+. ..
T Consensus 164 ~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~ 242 (329)
T 3fvz_A 164 CNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRN 242 (329)
T ss_dssp SCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTC
T ss_pred CCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCC
Confidence 689999999 5566666553221 23789999998 66666666666554 24
Q ss_pred eEEEEEcc------CCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEecCCcE
Q psy7433 125 VKCLAIDP------HEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGADGSM 197 (213)
Q Consensus 125 v~~~~~~~------~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~d~~i 197 (213)
+..++|+| +++.+++...+..|++||+.+++.+..+..... +...+..++++|++. +++...++.|
T Consensus 243 ~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~-------~~~~p~~ia~~~dG~lyvad~~~~~I 315 (329)
T 3fvz_A 243 VFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRK-------HFDMPHDIVASEDGTVYIGDAHTNTV 315 (329)
T ss_dssp EEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSS-------CCSSEEEEEECTTSEEEEEESSSCCE
T ss_pred cceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCC-------ccCCeeEEEECCCCCEEEEECCCCEE
Confidence 67788888 444344444556899999999998888742111 015689999999875 5666778999
Q ss_pred EEEeCCCC
Q psy7433 198 KVRQLPDR 205 (213)
Q Consensus 198 ~iw~~~~~ 205 (213)
++|++...
T Consensus 316 ~~~~~~~~ 323 (329)
T 3fvz_A 316 WKFTLTEK 323 (329)
T ss_dssp EEEEEEEC
T ss_pred EEEeCCcc
Confidence 99998653
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=99.68 E-value=1.1e-14 Score=109.15 Aligned_cols=178 Identities=11% Similarity=0.150 Sum_probs=120.5
Q ss_pred EEEEeCCCCeEEEeec-------cCCCccEEEEeCCCcccccceeeeeee------cCCceEEEEecCCCEEEEEcC--C
Q psy7433 12 DFVFLGSCSLVATAGH-------SSESKNVCLWDSLLPQKKALVQAFVCH------DQGASSLVFAPQHQLLISAGK--K 76 (213)
Q Consensus 12 ~~~~~~~~~~l~~~g~-------~s~~~~i~iwd~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~--d 76 (213)
.++|+|++++++++.+ +..++.|.+||. .+.+.+..+... ......++++|+|++|++++. +
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~---~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~ 130 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDA---DKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPA 130 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEET---TTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSS
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEEC---cCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCC
Confidence 8999999999998731 013678999998 455666665532 245678999999999998864 5
Q ss_pred CcEEEEeccCceEEEe-cccCCC---------CeeEEEecCCCCEEEEe-------------------------------
Q psy7433 77 GDICVIDLRQRVIRSR-FNAHES---------PVKCLAIDPHEEFFVTG------------------------------- 115 (213)
Q Consensus 77 ~~v~iwd~~~~~~~~~-~~~~~~---------~i~~~~~~~~~~~l~~~------------------------------- 115 (213)
+.|.+||+.+++.+.. +..... ...-++++++++.++..
T Consensus 131 ~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (361)
T 2oiz_A 131 TSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALD 210 (361)
T ss_dssp EEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEEC
T ss_pred CeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEeccc
Confidence 7899999999988777 542110 01123333333332222
Q ss_pred -------cCCCcee------------ec--------------eE---EEEEccCCceEEEecC-----------CCcEEE
Q psy7433 116 -------AGDGDIK------------SP--------------VK---CLAIDPHEEFFVTGAG-----------DGDIKV 148 (213)
Q Consensus 116 -------~~~~~i~------------~~--------------v~---~~~~~~~~~~l~~~~~-----------dg~i~v 148 (213)
+.++.+. .. .. .++|+|+++.++++.. .+.|.+
T Consensus 211 g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~v 290 (361)
T 2oiz_A 211 KDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWV 290 (361)
T ss_dssp SSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEE
T ss_pred CCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEE
Confidence 1112111 00 01 1788999886666533 347999
Q ss_pred EEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCC
Q psy7433 149 WSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 149 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~ 205 (213)
||+.+.+.+..+..+ . +.+++++|++ +|++++. +.|.+||..++
T Consensus 291 iD~~t~~~v~~i~~~-----------~-p~~ia~spdg~~l~v~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 291 MDTKTKQRVARIPGR-----------D-ALSMTIDQQRNLMLTLDG-GNVNVYDISQP 335 (361)
T ss_dssp EETTTTEEEEEEECT-----------T-CCEEEEETTTTEEEEECS-SCEEEEECSSS
T ss_pred EECCCCcEEEEEecC-----------C-eeEEEECCCCCEEEEeCC-CeEEEEECCCC
Confidence 999999999988775 4 8889999976 4666665 99999999987
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=99.66 E-value=2.6e-13 Score=100.23 Aligned_cols=192 Identities=14% Similarity=0.168 Sum_probs=128.6
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCC----Cc
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKK----GD 78 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~ 78 (213)
+.++...+.+++|+|++++++++ ..++.|.+||.+ ..+.......+...+.+++++|+++++++...+ +.
T Consensus 40 ~~~~~~~~~~~~~~~~g~l~~~~---~~~~~i~~~d~~---~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~ 113 (333)
T 2dg1_A 40 ISKKGLQLEGLNFDRQGQLFLLD---VFEGNIFKINPE---TKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGG 113 (333)
T ss_dssp EESSCCCEEEEEECTTSCEEEEE---TTTCEEEEECTT---TCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCE
T ss_pred EeccCccccCcEECCCCCEEEEE---CCCCEEEEEeCC---CCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCce
Confidence 34556678899999999988777 678999999973 333333222455779999999999888877666 68
Q ss_pred EEEEeccCceEEEecc--cCCCCeeEEEecCCCCEEEEecC------CCcee----------------eceEEEEEccCC
Q psy7433 79 ICVIDLRQRVIRSRFN--AHESPVKCLAIDPHEEFFVTGAG------DGDIK----------------SPVKCLAIDPHE 134 (213)
Q Consensus 79 v~iwd~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~------~~~i~----------------~~v~~~~~~~~~ 134 (213)
|.+||..+++....+. .....+..++++|+++.+++... .+.+. ..+..++|+|++
T Consensus 114 i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg 193 (333)
T 2dg1_A 114 IFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDE 193 (333)
T ss_dssp EEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTS
T ss_pred EEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCC
Confidence 9999998776543332 23456889999999987776653 12222 246789999999
Q ss_pred ceE-EEecCCCcEEEEEccC-CeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeE-EEEecCCcEEEEeCC
Q psy7433 135 EFF-VTGAGDGDIKVWSLSG-NHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRL-FSCGADGSMKVRQLP 203 (213)
Q Consensus 135 ~~l-~~~~~dg~i~v~d~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l-~s~~~d~~i~iw~~~ 203 (213)
+++ ++.+.++.|.+||+.+ +.....+.... ..... ....+..+++++++.+ ++...++.|.+||..
T Consensus 194 ~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~--~~~~~-~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~ 262 (333)
T 2dg1_A 194 KVLWVTETTANRLHRIALEDDGVTIQPFGATI--PYYFT-GHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKR 262 (333)
T ss_dssp SEEEEEEGGGTEEEEEEECTTSSSEEEEEEEE--EEECC-SSSEEEEEEEBTTCCEEEEEETTTEEEEECTT
T ss_pred CEEEEEeCCCCeEEEEEecCCCcCcccccceE--EEecC-CCCCCCceEECCCCCEEEEEcCCCEEEEECCC
Confidence 855 4556678999999863 33222111000 00000 0035778999987765 444567899999984
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.65 E-value=4e-15 Score=119.59 Aligned_cols=183 Identities=11% Similarity=0.073 Sum_probs=119.5
Q ss_pred EEEEe--CCCCe-EEEeeccCCCccEEEEeCCCcccc-cceeeeee-----ecCCceEEEEecCCCEEEEEcCC------
Q psy7433 12 DFVFL--GSCSL-VATAGHSSESKNVCLWDSLLPQKK-ALVQAFVC-----HDQGASSLVFAPQHQLLISAGKK------ 76 (213)
Q Consensus 12 ~~~~~--~~~~~-l~~~g~~s~~~~i~iwd~~~~~~~-~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d------ 76 (213)
...|+ |||+. |+.+. ..+..|.++++.. .+ .....+.. |...+..++|+|+|+.|++++.+
T Consensus 81 ~~~~~~SPDg~~~la~~~--~~~~~l~~~~~~~--~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~ 156 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTH--FGDQRLYAFEPDA--PGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGP 156 (662)
T ss_dssp CEEEECCSSSSCEEEEEB--TTTCCEEEECTTS--TTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSST
T ss_pred cceeeeecCCCeEEEEEE--CCCCeEEEEcCCC--CCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCC
Confidence 56666 99998 88763 2356666666520 01 22333433 45567899999999999988876
Q ss_pred ----CcEEEEeccC------ceEEEecc-cCCCCeeEEEecCCCCEEEEecCC-------------------C---cee-
Q psy7433 77 ----GDICVIDLRQ------RVIRSRFN-AHESPVKCLAIDPHEEFFVTGAGD-------------------G---DIK- 122 (213)
Q Consensus 77 ----~~v~iwd~~~------~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~~-------------------~---~i~- 122 (213)
..|.+||+.+ ++.. .+. .+...+..++|+|||++|+.++.+ + ...
T Consensus 157 ~~~~~~i~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~ 235 (662)
T 3azo_A 157 SDVRRFLAAVPLDGSAAADRSAVR-ELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRT 235 (662)
T ss_dssp TCEEEEEEEEETTSTTTTCGGGSE-ESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEE
T ss_pred CCceeEEEEEECCCCccccCCcee-EEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEE
Confidence 5899999988 5543 444 555678889999999999876633 2 111
Q ss_pred ------eceEEEEEccCCceEEEecCCC--cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEec
Q psy7433 123 ------SPVKCLAIDPHEEFFVTGAGDG--DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGA 193 (213)
Q Consensus 123 ------~~v~~~~~~~~~~~l~~~~~dg--~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~ 193 (213)
..+..+.|+|||+++++++.++ .|.+||+.+++.......+..... ......+..++++|++. +++++.
T Consensus 236 l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~--p~w~~~~~~~~~~~~~~~~~~~~~ 313 (662)
T 3azo_A 236 LLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAG--PLWTPGMRWFAPLANGLIAVVHGK 313 (662)
T ss_dssp EEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSC--CCCSTTCCSEEECTTSCEEEEEBS
T ss_pred eCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccC--ccccccCceEeEeCCCEEEEEEEc
Confidence 4567889999999888888888 566666656655433332211000 00001155688888655 667777
Q ss_pred CCcEEEEeC
Q psy7433 194 DGSMKVRQL 202 (213)
Q Consensus 194 d~~i~iw~~ 202 (213)
+.++||.+
T Consensus 314 -~~~~l~~~ 321 (662)
T 3azo_A 314 -GAAVLGIL 321 (662)
T ss_dssp -SSCEEEEE
T ss_pred -CccEEEEE
Confidence 99999944
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=99.64 E-value=7.8e-14 Score=100.63 Aligned_cols=169 Identities=12% Similarity=0.120 Sum_probs=130.4
Q ss_pred CCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeec-CCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccC
Q psy7433 18 SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHD-QGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAH 96 (213)
Q Consensus 18 ~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~ 96 (213)
.+++|+++ +.++.|.+||. ++++.+..+..+. ..+.++.++|+|+++++ .++.|..||. +++.+..+...
T Consensus 4 ~~~~lv~~---~~~~~v~~~d~---~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs--~~~~V~~~d~-~G~~~W~~~~~ 74 (276)
T 3no2_A 4 PQHLLVGG---SGWNKIAIINK---DTKEIVWEYPLEKGWECNSVAATKAGEILFS--YSKGAKMITR-DGRELWNIAAP 74 (276)
T ss_dssp CCEEEEEC---TTCSEEEEEET---TTTEEEEEEECCTTCCCCEEEECTTSCEEEE--CBSEEEEECT-TSCEEEEEECC
T ss_pred CCcEEEee---CCCCEEEEEEC---CCCeEEEEeCCCccCCCcCeEECCCCCEEEe--CCCCEEEECC-CCCEEEEEcCC
Confidence 46788887 79999999997 5778888887665 47899999999998883 4678999998 88888888764
Q ss_pred -CCCeeEEEecCCCCEEEEecC-CCcee----------------------eceEEEEEccCCceEEEecCCCcEEEEEcc
Q psy7433 97 -ESPVKCLAIDPHEEFFVTGAG-DGDIK----------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLS 152 (213)
Q Consensus 97 -~~~i~~~~~~~~~~~l~~~~~-~~~i~----------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~ 152 (213)
...+.++.+.|+++.+++.+. ++.+. .....+++.++|+++++...++.|..||..
T Consensus 75 ~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~ 154 (276)
T 3no2_A 75 AGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN 154 (276)
T ss_dssp TTCEEEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT
T ss_pred CCccccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC
Confidence 346888999999999888766 44443 123345678899999999999999999987
Q ss_pred CCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCcc
Q psy7433 153 GNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~ 207 (213)
++.+.++.... .+.++...+++ .++++..++.|..+|..+++.
T Consensus 155 -G~~~w~~~~~~-----------~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~ 198 (276)
T 3no2_A 155 -GQLLNSVKLSG-----------TPFSSAFLDNGDCLVACGDAHCFVQLNLESNRI 198 (276)
T ss_dssp -SCEEEEEECSS-----------CCCEEEECTTSCEEEECBTTSEEEEECTTTCCE
T ss_pred -CCEEEEEECCC-----------CccceeEcCCCCEEEEeCCCCeEEEEeCcCCcE
Confidence 89888887642 34455666654 566677777899999886654
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=99.64 E-value=5.8e-14 Score=104.20 Aligned_cols=175 Identities=15% Similarity=0.140 Sum_probs=116.0
Q ss_pred ceEEEEEeCCCCeEEEeeccC--CCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCC----------
Q psy7433 9 ITSDFVFLGSCSLVATAGHSS--ESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKK---------- 76 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s--~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------- 76 (213)
.+..++|+|+|+.||...... ....|.+|++. .++... +..+.. +..++|+|+++.|+.++.+
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~---~g~~~~-l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~ 134 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLE---TLSSKK-ILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFE 134 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETT---TTEEEE-EEEESE-EEEEEECTTSSEEEEEEECCCC-------
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECC---CCceEE-EEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEE
Confidence 467799999999999873211 12247777873 333332 222334 8999999999988887632
Q ss_pred -----------------CcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCC---------cee--------
Q psy7433 77 -----------------GDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDG---------DIK-------- 122 (213)
Q Consensus 77 -----------------~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~---------~i~-------- 122 (213)
..|.+||+.+++.+..+.. . .+..++|+|++ .++++..+. .+.
T Consensus 135 ~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~ 211 (347)
T 2gop_A 135 DDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEE 211 (347)
T ss_dssp --CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEEE
T ss_pred cccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCceE
Confidence 5799999998876445544 3 78899999999 777665432 111
Q ss_pred ---eceEEEEEccCCceEEEecCC--------CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEE-EEeCCCCeEEE
Q psy7433 123 ---SPVKCLAIDPHEEFFVTGAGD--------GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQ-LHVDGGSRLFS 190 (213)
Q Consensus 123 ---~~v~~~~~~~~~~~l~~~~~d--------g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~l~s 190 (213)
.......++|+|++|+.++.+ ..|.+|| +++.......+. ..+.. +.|+ ++.+++
T Consensus 212 ~l~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~----------~~~~~~~~~s-dg~~~~ 278 (347)
T 2gop_A 212 KMFEKVSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVD----------RGVGQAKIKD-GKVYFT 278 (347)
T ss_dssp EEEEEESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCC----------SEEEEEEEET-TEEEEE
T ss_pred EeccCcceeeECCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCC----------cccCCccEEc-CcEEEE
Confidence 101123348999988776643 3678888 554443333332 45775 8898 667788
Q ss_pred EecCCcEEEEeCCCC
Q psy7433 191 CGADGSMKVRQLPDR 205 (213)
Q Consensus 191 ~~~d~~i~iw~~~~~ 205 (213)
++.++.++|| +.++
T Consensus 279 ~~~~~~~~l~-~~~g 292 (347)
T 2gop_A 279 LFEEGSVNLY-IWDG 292 (347)
T ss_dssp EEETTEEEEE-EESS
T ss_pred EecCCcEEEE-EcCC
Confidence 8899999999 8743
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=99.64 E-value=1.3e-13 Score=98.78 Aligned_cols=182 Identities=8% Similarity=0.004 Sum_probs=129.3
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeee-eecCCceEEEEecCCCEEEEEcCCCcEEEEeccC
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV-CHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQ 86 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~ 86 (213)
..+.+++++++++++++. . ++.|.+||.+ .. ....+. .....+..++++++++++++...++.|.+|+..+
T Consensus 67 ~~p~~i~~~~~g~l~v~~---~-~~~i~~~d~~---~~-~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~ 138 (270)
T 1rwi_B 67 YQPQGLAVDGAGTVYVTD---F-NNRVVTLAAG---SN-NQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGS 138 (270)
T ss_dssp CSCCCEEECTTCCEEEEE---T-TTEEEEECTT---CS-CCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTC
T ss_pred CCcceeEECCCCCEEEEc---C-CCEEEEEeCC---Cc-eEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCC
Confidence 467889999999977776 4 8899999973 22 222222 2235688999999998777777788999998665
Q ss_pred ceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCCCcEEEE
Q psy7433 87 RVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDGDIKVW 149 (213)
Q Consensus 87 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg~i~v~ 149 (213)
.............+..++++|+++.+++...++.+. ..+..++++++|.++++...++.|.+|
T Consensus 139 ~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~ 218 (270)
T 1rwi_B 139 KTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKL 218 (270)
T ss_dssp CSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEE
T ss_pred ceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEE
Confidence 543332222334678999999998777666555543 457889999999877777778899999
Q ss_pred EccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEecCCcEEEEeCCCCcc
Q psy7433 150 SLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 150 d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~d~~i~iw~~~~~~~ 207 (213)
|............+ ...+.++++++++. +++...++.|+++++...+.
T Consensus 219 ~~~~~~~~~~~~~~----------~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 219 LAGSTTSTVLPFTG----------LNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp CTTCSCCEECCCCS----------CSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGGS
T ss_pred cCCCCcceeeccCC----------CCCceeEEECCCCCEEEEECCCCEEEEEcCCCccc
Confidence 98654332211111 14688999998665 56667889999999987643
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.63 E-value=2.4e-14 Score=115.88 Aligned_cols=187 Identities=10% Similarity=0.024 Sum_probs=122.4
Q ss_pred cccCceEEEEEeCCCCeEEEeec--cCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCc----
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGH--SSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGD---- 78 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~--~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~---- 78 (213)
+|...+.+++|||||++||.+.. ++.+..|++||+. +++.+............++|+|+|+.|+.++.+..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~---tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~ 194 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVD---SGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIK 194 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETT---TCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSC
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECC---CCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCc
Confidence 45557899999999999994321 1455789999994 33332010111112268999999999999888765
Q ss_pred ---------EEEEeccCce----EEEecccCCCCeeEEEecCCCCEEEEecCCC----cee----------------ece
Q psy7433 79 ---------ICVIDLRQRV----IRSRFNAHESPVKCLAIDPHEEFFVTGAGDG----DIK----------------SPV 125 (213)
Q Consensus 79 ---------v~iwd~~~~~----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~----~i~----------------~~v 125 (213)
|++|++.+++ .+.....+...+..+.|+|++++++..+.++ .+. ..+
T Consensus 195 ~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~ 274 (695)
T 2bkl_A 195 VDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAK 274 (695)
T ss_dssp GGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCC
T ss_pred cccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCce
Confidence 9999998765 3333344556788999999999888776554 222 233
Q ss_pred EEEEEccCCceEEEec---CCCcEEEEEccCCee--eeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEE
Q psy7433 126 KCLAIDPHEEFFVTGA---GDGDIKVWSLSGNHL--LYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVR 200 (213)
Q Consensus 126 ~~~~~~~~~~~l~~~~---~dg~i~v~d~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw 200 (213)
....+ +++++++.+. .++.|.+||+.++.. ...+..+.. ...+..++++.+..+++...|+..++|
T Consensus 275 ~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~--------~~~l~~~~~~~~~lv~~~~~dg~~~l~ 345 (695)
T 2bkl_A 275 YEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDS--------SASLLSVSIVGGHLSLEYLKDATSEVR 345 (695)
T ss_dssp EEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCS--------SCEEEEEEEETTEEEEEEEETTEEEEE
T ss_pred EEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCC--------CCeEEEEEEECCEEEEEEEECCEEEEE
Confidence 44445 5666444443 257899999876542 122222221 145778888855567888899988888
Q ss_pred eCC
Q psy7433 201 QLP 203 (213)
Q Consensus 201 ~~~ 203 (213)
.+.
T Consensus 346 ~~~ 348 (695)
T 2bkl_A 346 VAT 348 (695)
T ss_dssp EEE
T ss_pred EEe
Confidence 654
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=99.61 E-value=5.3e-13 Score=95.57 Aligned_cols=181 Identities=8% Similarity=0.016 Sum_probs=125.3
Q ss_pred ceEEEEEeCCCCeEE-EeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCc
Q psy7433 9 ITSDFVFLGSCSLVA-TAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR 87 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~-~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~ 87 (213)
...+++++|+|++++ +. ..++.|.+|+.. ..............+..++++++++++++.. ++.|..||....
T Consensus 25 ~p~~i~~~~~g~l~v~~~---~~~~~i~~~~~~---~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~ 97 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSE---GMYGRVVKLATG---STGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSN 97 (270)
T ss_dssp CEEEEEECTTCCEEEEEC---SSSCEEEEECC--------EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCS
T ss_pred CccceEECCCCCEEEEcc---CCCCcEEEecCC---CcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCc
Confidence 678999999999777 54 467899999963 2221111112334678899999998666665 889999998765
Q ss_pred eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCCCcEEEEE
Q psy7433 88 VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWS 150 (213)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d 150 (213)
............+..++++|+++.+++...++.+. ..+..++++|+++++++...++.|.+||
T Consensus 98 ~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~ 177 (270)
T 1rwi_B 98 NQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLE 177 (270)
T ss_dssp CCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEEC
T ss_pred eEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEe
Confidence 43322122335688999999998777765555543 3568899999999777777788999999
Q ss_pred ccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEE-EEecCCcEEEEeCCCCc
Q psy7433 151 LSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLF-SCGADGSMKVRQLPDRD 206 (213)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~-s~~~d~~i~iw~~~~~~ 206 (213)
.............. ..+.++++++++.+. +...++.|.+|+.....
T Consensus 178 ~~~~~~~~~~~~~~----------~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~ 224 (270)
T 1rwi_B 178 AESNNQVVLPFTDI----------TAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT 224 (270)
T ss_dssp TTTCCEEECCCSSC----------CSEEEEEECTTCCEEEEETTTSCEEEECTTCSC
T ss_pred cCCCceEeecccCC----------CCceEEEECCCCCEEEEECCCCcEEEEcCCCCc
Confidence 87655433222211 468899999876654 44457899999987643
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.61 E-value=2.7e-14 Score=116.29 Aligned_cols=178 Identities=11% Similarity=0.051 Sum_probs=118.3
Q ss_pred EEEEEeCCCCeEEEeeccCCC---------ccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 11 SDFVFLGSCSLVATAGHSSES---------KNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 11 ~~~~~~~~~~~l~~~g~~s~~---------~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
.++.|||||++|+.+ +.+ +.+.+||+. +++ ...+..+...+...+|||||+.|+.+. ++.|++
T Consensus 65 ~~~~~Spdg~~l~~~---~~~~~~~r~~~~~~~~~~d~~---~~~-~~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~ 136 (740)
T 4a5s_A 65 NDYSISPDGQFILLE---YNYVKQWRHSYTASYDIYDLN---KRQ-LITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYV 136 (740)
T ss_dssp CEEEECTTSSEEEEE---EEEEECSSSCEEEEEEEEETT---TTE-ECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEE
T ss_pred cceEECCCCCEEEEE---ECCeeeEEEccceEEEEEECC---CCc-EEEcccCCCcceeeEECCCCCEEEEEE-CCeEEE
Confidence 458899999999988 343 677899984 333 233555677899999999999999884 689999
Q ss_pred EeccCceEEEecc-cCCCC-----------------eeEEEecCCCCEEEEecCCCc-----------------------
Q psy7433 82 IDLRQRVIRSRFN-AHESP-----------------VKCLAIDPHEEFFVTGAGDGD----------------------- 120 (213)
Q Consensus 82 wd~~~~~~~~~~~-~~~~~-----------------i~~~~~~~~~~~l~~~~~~~~----------------------- 120 (213)
||+.+++..+... ++... ...+.|+|||+.|+..+.|..
T Consensus 137 ~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~ 216 (740)
T 4a5s_A 137 KIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRV 216 (740)
T ss_dssp ESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEE
T ss_pred EECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceee
Confidence 9998876544221 22211 235899999999887642211
Q ss_pred -------------e----------------e------------eceEEEEEccCCceEEEecC----CCcEEEEEccCCe
Q psy7433 121 -------------I----------------K------------SPVKCLAIDPHEEFFVTGAG----DGDIKVWSLSGNH 155 (213)
Q Consensus 121 -------------i----------------~------------~~v~~~~~~~~~~~l~~~~~----dg~i~v~d~~~~~ 155 (213)
+ . ..+..++|+|||+.++.... +..|.+||+.+++
T Consensus 217 ~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 217 PYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp ECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred cCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 0 0 12567899999996655432 3479999998876
Q ss_pred ----eee--ee--cCCCCceeEEEecCCCe-----EEEEeCCCCe-EE-EEe-cCC--cEEEEeCCCCc
Q psy7433 156 ----LLY--NF--PGEHARSSFFKHIGQGV-----TQLHVDGGSR-LF-SCG-ADG--SMKVRQLPDRD 206 (213)
Q Consensus 156 ----~~~--~~--~~~~~~~~~~~~~~~~v-----~~~~~~~~~~-l~-s~~-~d~--~i~iw~~~~~~ 206 (213)
+.. .+ ..+. ..+ ....|+|++. |+ ..+ .+| .|++||+..+.
T Consensus 297 ~~~~~~~~~~l~~~~~~----------~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~ 355 (740)
T 4a5s_A 297 GRWNCLVARQHIEMSTT----------GWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKD 355 (740)
T ss_dssp TEEEECGGGCEEEECSS----------SCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSS
T ss_pred cccceeEEEEeeeccCC----------ceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCc
Confidence 221 11 2222 222 3678999764 44 454 344 68888887653
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.60 E-value=1.4e-14 Score=109.02 Aligned_cols=188 Identities=8% Similarity=-0.082 Sum_probs=120.0
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEE--EecCCCEEEEE---------
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLV--FAPQHQLLISA--------- 73 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~l~~~--------- 73 (213)
+|...+....|+|+|+.|+.+ +.++.|++||+. .++.......+...+.... ++|++++++..
T Consensus 78 ~~~~~~~~~~~spdg~~l~~~---~~~~~l~~~d~~---~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~ 151 (388)
T 3pe7_A 78 GRGDNTFGGFLSPDDDALFYV---KDGRNLMRVDLA---TLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVP 151 (388)
T ss_dssp SSCBCSSSCEECTTSSEEEEE---ETTTEEEEEETT---TCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCC
T ss_pred CCCCCccceEEcCCCCEEEEE---eCCCeEEEEECC---CCcceeeeechhhcccccceeECCCCCeeccccccCccccc
Confidence 444455567899999999998 578899999984 3433333443444443343 48899888742
Q ss_pred -------------cCCCcEEEEeccCceEEEecccCCCCeeEEEecC-CCCEEEEecCCC------cee-----------
Q psy7433 74 -------------GKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDP-HEEFFVTGAGDG------DIK----------- 122 (213)
Q Consensus 74 -------------~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~------~i~----------- 122 (213)
..+..|.+||+.+++.... ..+...+..++|+| +++.++.....+ .+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l-~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~ 230 (388)
T 3pe7_A 152 LTDWKKFHEFYFTKPCCRLMRVDLKTGESTVI-LQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRK 230 (388)
T ss_dssp CCSHHHHHHHGGGCCCEEEEEEETTTCCEEEE-EEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEE
T ss_pred ccccchhhhhhccCCcceEEEEECCCCceEEe-ecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEE
Confidence 2447899999998865443 34566789999999 999888766532 222
Q ss_pred -------eceEEEEEccCCceEEEecC-CC----cEEEEEccCCeee--eeecCCCCceeEEEecCCCeEEEEeCCCCe-
Q psy7433 123 -------SPVKCLAIDPHEEFFVTGAG-DG----DIKVWSLSGNHLL--YNFPGEHARSSFFKHIGQGVTQLHVDGGSR- 187 (213)
Q Consensus 123 -------~~v~~~~~~~~~~~l~~~~~-dg----~i~v~d~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~- 187 (213)
..+..+.|+|+|+.|+..+. ++ .|.+||+.+++.. ..+..+. .... ....+.|+|++.
T Consensus 231 l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~---~~~~----~~~~~~~spdg~~ 303 (388)
T 3pe7_A 231 VKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACS---HLMS----NYDGSLMVGDGSD 303 (388)
T ss_dssp SCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEE---EEEE----CTTSSEEEEEECC
T ss_pred eeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCce---eeee----cCCCCeEccCCCc
Confidence 24677899999997755433 22 3999999877643 2332200 0000 011125787653
Q ss_pred EEEE---------ecCCcEEEEeCCCCc
Q psy7433 188 LFSC---------GADGSMKVRQLPDRD 206 (213)
Q Consensus 188 l~s~---------~~d~~i~iw~~~~~~ 206 (213)
|+.. ..+..|++||+.+++
T Consensus 304 l~~~~~~~~~~~~~~~~~i~~~d~~~~~ 331 (388)
T 3pe7_A 304 APVDVQDDSGYKIENDPFLYVFNMKNGT 331 (388)
T ss_dssp C------------CCCCEEEEEETTTTE
T ss_pred ceeEeeeccccccCCCCEEEEEeccCCc
Confidence 4432 456689999998764
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=99.59 E-value=5.2e-15 Score=111.52 Aligned_cols=184 Identities=8% Similarity=-0.032 Sum_probs=112.9
Q ss_pred eEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCC-ceEEEEecCCCEEEEEcCCCcEEEEeccCce
Q psy7433 10 TSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQG-ASSLVFAPQHQLLISAGKKGDICVIDLRQRV 88 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~ 88 (213)
+.+++|+|+|++|+.......+..|.+||+. .++.. .+..+... ...+.|+|++++|+.++.++.|.+||+.+++
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~---~~~~~-~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~ 113 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLE---TQQAV-QLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLE 113 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETT---TTEEE-ECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCC
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECC---CCcEE-EeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCC
Confidence 6778999999998877321123468888873 33322 22222222 3347899999999999888899999998886
Q ss_pred EEEecccCCCCeeE-------------------EEecCCCCEEEEec-----CCCcee----------------eceEEE
Q psy7433 89 IRSRFNAHESPVKC-------------------LAIDPHEEFFVTGA-----GDGDIK----------------SPVKCL 128 (213)
Q Consensus 89 ~~~~~~~~~~~i~~-------------------~~~~~~~~~l~~~~-----~~~~i~----------------~~v~~~ 128 (213)
.......+...... ..++|+++.++... .+..+. ..+..+
T Consensus 114 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~ 193 (396)
T 3c5m_A 114 EQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHP 193 (396)
T ss_dssp EEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEEE
T ss_pred cEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCcccccc
Confidence 55444433322212 34566554433221 111121 457788
Q ss_pred EEcc-CCceEEEecCC------CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEecC-----C
Q psy7433 129 AIDP-HEEFFVTGAGD------GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGAD-----G 195 (213)
Q Consensus 129 ~~~~-~~~~l~~~~~d------g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~d-----~ 195 (213)
.|+| +++.|+..+.+ ..|.+||+..++...... +.. ...+..+.|+|++. |+..+.+ +
T Consensus 194 ~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~-~~~--------~~~~~~~~~spdg~~l~~~~~~~~~~~~ 264 (396)
T 3c5m_A 194 IYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE-HAE--------GESCTHEFWIPDGSAMAYVSYFKGQTDR 264 (396)
T ss_dssp EEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC-CCT--------TEEEEEEEECTTSSCEEEEEEETTTCCE
T ss_pred eECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec-cCC--------CccccceEECCCCCEEEEEecCCCCccc
Confidence 9999 78866655443 368888886554322222 210 13578899999764 6666543 4
Q ss_pred cEEEEeCCCCc
Q psy7433 196 SMKVRQLPDRD 206 (213)
Q Consensus 196 ~i~iw~~~~~~ 206 (213)
.|++||+.+++
T Consensus 265 ~l~~~d~~~g~ 275 (396)
T 3c5m_A 265 VIYKANPETLE 275 (396)
T ss_dssp EEEEECTTTCC
T ss_pred eEEEEECCCCC
Confidence 49999998764
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=5.3e-13 Score=108.30 Aligned_cols=189 Identities=6% Similarity=-0.017 Sum_probs=120.7
Q ss_pred ccCceEEEEEeCCCCeEEEeec--cCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCc-----
Q psy7433 6 HNKITSDFVFLGSCSLVATAGH--SSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGD----- 78 (213)
Q Consensus 6 h~~~v~~~~~~~~~~~l~~~g~--~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~----- 78 (213)
|...+..++|||||++||.+.. ++....|++||+. +++.+.... ....+..++|+|||+.|+.++.++.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~---tg~~~~~~~-~~~~~~~~~wspDg~~l~~~~~~~~~~~~~ 198 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVD---GAKELPDVL-ERVKFSCMAWTHDGKGMFYNAYPQQDGKSD 198 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETT---TTEEEEEEE-EEECSCCEEECTTSSEEEEEECCCCSSCCS
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECC---CCCCCcccc-cCcccceEEEEeCCCEEEEEEECCcccccc
Confidence 4446889999999999997731 0111289999994 444333222 2233678999999999998887765
Q ss_pred -----------EEEEeccCce----EEEecccCCCCeeEEEecCCCCEEEEecC-----CCcee-----e------c---
Q psy7433 79 -----------ICVIDLRQRV----IRSRFNAHESPVKCLAIDPHEEFFVTGAG-----DGDIK-----S------P--- 124 (213)
Q Consensus 79 -----------v~iwd~~~~~----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-----~~~i~-----~------~--- 124 (213)
|++|++.+++ .+.....+...+..+.|+|++++|+..+. +..+. . .
T Consensus 199 ~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~ 278 (710)
T 2xdw_A 199 GTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILK 278 (710)
T ss_dssp SSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCC
T ss_pred ccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccc
Confidence 9999998764 22222334556789999999998887654 22222 1 1
Q ss_pred eEE---------EEEccCCceEEEecCC----CcEEEEEccCCee--eeeecCCCCceeEEEecCCCeEEEEeCCCCe-E
Q psy7433 125 VKC---------LAIDPHEEFFVTGAGD----GDIKVWSLSGNHL--LYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-L 188 (213)
Q Consensus 125 v~~---------~~~~~~~~~l~~~~~d----g~i~v~d~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l 188 (213)
+.. -.|+|+|+.|+..+.. +.|.+||+.++.. ...+..+... ..+..+.|++++. +
T Consensus 279 ~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~--------~~~~~~~~~~~~~lv 350 (710)
T 2xdw_A 279 WVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEK--------DVLEWVACVRSNFLV 350 (710)
T ss_dssp CEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSS--------CEEEEEEEETTTEEE
T ss_pred eEEeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCC--------CeEEEEEEEcCCEEE
Confidence 111 2477888866655442 3699999876631 2333333210 2577888886554 6
Q ss_pred EEEecCCc--EEEEeCCCCc
Q psy7433 189 FSCGADGS--MKVRQLPDRD 206 (213)
Q Consensus 189 ~s~~~d~~--i~iw~~~~~~ 206 (213)
++...|+. |.+|++.+++
T Consensus 351 ~~~~~~g~~~l~~~~~~~g~ 370 (710)
T 2xdw_A 351 LCYLHDVKNTLQLHDLATGA 370 (710)
T ss_dssp EEEEETTEEEEEEEETTTCC
T ss_pred EEEEECCEEEEEEEECCCCC
Confidence 77777874 5566764543
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=99.58 E-value=2.9e-13 Score=101.50 Aligned_cols=165 Identities=11% Similarity=0.077 Sum_probs=117.9
Q ss_pred ceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCccc--------ccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEE
Q psy7433 9 ITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQK--------KALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDIC 80 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~--------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 80 (213)
+++.+++++...+++++| .+ .+++|++....+ .+... ...+.. |+.++| ++++|+++ .++.|+
T Consensus 39 ~~nlLais~~~gll~a~~---~~-~l~v~~~~~l~~~~~~~~~~~~~~~-~~~lp~-V~~l~f--d~~~L~v~-~~~~l~ 109 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAAS---GS-KAVVGELQLLRDHITSDSTPLTFKW-EKEIPD-VIFVCF--HGDQVLVS-TRNALY 109 (388)
T ss_dssp CCBCEEEETTTTEEEEEE---TT-EEEEEEHHHHHHHHHSSSCCCCCSE-EEECTT-EEEEEE--ETTEEEEE-ESSEEE
T ss_pred cccEEEEcCCCCEEEEeC---CC-EEEEEEhhHhhhhhccccccccceE-EeeCCC-eeEEEE--CCCEEEEE-cCCcEE
Confidence 689999999999999984 44 667798732210 11112 223556 999999 88999999 889999
Q ss_pred EEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-------------eceEEEEEccCCceEEEecCCCcEE
Q psy7433 81 VIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-------------SPVKCLAIDPHEEFFVTGAGDGDIK 147 (213)
Q Consensus 81 iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-------------~~v~~~~~~~~~~~l~~~~~dg~i~ 147 (213)
+||+++.........+..++.++.+.+. .++++..||.+. ..|+|++|+|+| ++.|..||.++
T Consensus 110 v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~~~~~Vs~v~WSpkG--~~vg~~dg~i~ 185 (388)
T 1xip_A 110 SLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQLAQNVTSFDVTNSQ--LAVLLKDRSFQ 185 (388)
T ss_dssp EEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEEEEESEEEEEECSSE--EEEEETTSCEE
T ss_pred EEEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCccccccCCceEEEEcCCc--eEEEEcCCcEE
Confidence 9999876544445556677888777654 388888898876 689999999999 67888999999
Q ss_pred EEEccCCee--eeeecCCCCceeEEEecCCCeEEEEeCCCCe
Q psy7433 148 VWSLSGNHL--LYNFPGEHARSSFFKHIGQGVTQLHVDGGSR 187 (213)
Q Consensus 148 v~d~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 187 (213)
+|+....+. ..++..+..... ...+...|.++.|.+++.
T Consensus 186 ~~~~~~~~~~~k~~I~~Pp~~~~-~~~~~~~V~sI~wl~~~~ 226 (388)
T 1xip_A 186 SFAWRNGEMEKQFEFSLPSELEE-LPVEEYSPLSVTILSPQD 226 (388)
T ss_dssp EEEEETTEEEEEEEECCCHHHHT-SCTTTSEEEEEEESSSSE
T ss_pred EEcCCCccccccceecCCccccc-ccCCCeeEEEEEEecCCe
Confidence 999887775 555532110000 000126799999998765
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=99.56 E-value=7.5e-13 Score=95.50 Aligned_cols=178 Identities=10% Similarity=0.068 Sum_probs=127.7
Q ss_pred cccccc-CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeec-CCceEEEEecCCCEEEEEcC-CCc
Q psy7433 2 TYQCHN-KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHD-QGASSLVFAPQHQLLISAGK-KGD 78 (213)
Q Consensus 2 ~l~~h~-~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~-d~~ 78 (213)
++..+. ..+.++.+.|+|+++++. ++.|..||. +++.+..+..+. ..+.++.+.++|+++++.+. ++.
T Consensus 30 ~~~~~~~~~~~~~~~~pdG~ilvs~-----~~~V~~~d~----~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~ 100 (276)
T 3no2_A 30 EYPLEKGWECNSVAATKAGEILFSY-----SKGAKMITR----DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPST 100 (276)
T ss_dssp EEECCTTCCCCEEEECTTSCEEEEC-----BSEEEEECT----TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEE
T ss_pred EeCCCccCCCcCeEECCCCCEEEeC-----CCCEEEECC----CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCE
Confidence 344444 468899999999999943 677999995 466777776542 46788999999999998876 778
Q ss_pred EEEEeccCceEEEeccc------CCCCeeEEEecCCCCEEEEecCCCcee---------------eceEEEEEccCCceE
Q psy7433 79 ICVIDLRQRVIRSRFNA------HESPVKCLAIDPHEEFFVTGAGDGDIK---------------SPVKCLAIDPHEEFF 137 (213)
Q Consensus 79 v~iwd~~~~~~~~~~~~------~~~~i~~~~~~~~~~~l~~~~~~~~i~---------------~~v~~~~~~~~~~~l 137 (213)
+..+|. +++.+..+.. +......++..++++++++...++.+. ..+.++...++++++
T Consensus 101 v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~G~~~w~~~~~~~~~~~~~~~~g~~~ 179 (276)
T 3no2_A 101 ILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPNGQLLNSVKLSGTPFSSAFLDNGDCL 179 (276)
T ss_dssp EEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTTSCEEEEEECSSCCCEEEECTTSCEE
T ss_pred EEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCCCCEEEEEECCCCccceeEcCCCCEE
Confidence 888885 6766655542 112355677889999999888887775 356678888999999
Q ss_pred EEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEec
Q psy7433 138 VTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGA 193 (213)
Q Consensus 138 ~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~ 193 (213)
+++..++.|..+|..+++.+.++........ .-..+..+...+++.++.++.
T Consensus 180 v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~----~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 180 VACGDAHCFVQLNLESNRIVRRVNANDIEGV----QLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EECBTTSEEEEECTTTCCEEEEEEGGGSBSC----CCSEEEEEEECTTSCEEEEEE
T ss_pred EEeCCCCeEEEEeCcCCcEEEEecCCCCCCc----cccccccceEcCCCCEEEEec
Confidence 9998888999999999999888764321100 002366777777666544443
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=99.55 E-value=2.9e-13 Score=99.99 Aligned_cols=178 Identities=15% Similarity=0.157 Sum_probs=126.3
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccC
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQ 86 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~ 86 (213)
...|.++.|+|++..++.. +.++.++.|.- .....+..+...+.+++|++++++++++..++.|.+||..+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~ 75 (333)
T 2dg1_A 5 QQDLPTLFYSGKSNSAVPI---ISESELQTITA------EPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPET 75 (333)
T ss_dssp -CCCCBCCSCGGGGCSSCC---CCGGGSCEEEC------EEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTT
T ss_pred ccccceeeecCCccceeEE---eecccCccccc------ceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCC
Confidence 4568889999988888777 57889999942 23344555566778999999999888888899999999988
Q ss_pred ceEEEecccCCCCeeEEEecCCCCEEEEecCC----Ccee-------------------eceEEEEEccCCceEEEecC-
Q psy7433 87 RVIRSRFNAHESPVKCLAIDPHEEFFVTGAGD----GDIK-------------------SPVKCLAIDPHEEFFVTGAG- 142 (213)
Q Consensus 87 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~----~~i~-------------------~~v~~~~~~~~~~~l~~~~~- 142 (213)
++.......+...+.+++++|+++.+++...+ +.+. ..+..++++|+|+++++...
T Consensus 76 ~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~ 155 (333)
T 2dg1_A 76 KEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRG 155 (333)
T ss_dssp CCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCC
T ss_pred CcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccc
Confidence 87655443456779999999999887776655 3332 24778999999987776653
Q ss_pred -----CCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-E-EEEecCCcEEEEeCCC
Q psy7433 143 -----DGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-L-FSCGADGSMKVRQLPD 204 (213)
Q Consensus 143 -----dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l-~s~~~d~~i~iw~~~~ 204 (213)
.+.|..+|..+++....... ...+..++|+|++. | ++.+.++.|.+|++.+
T Consensus 156 ~~~~~~~~l~~~~~~~~~~~~~~~~-----------~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~ 213 (333)
T 2dg1_A 156 YSTNPLGGVYYVSPDFRTVTPIIQN-----------ISVANGIALSTDEKVLWVTETTANRLHRIALED 213 (333)
T ss_dssp BTTBCCEEEEEECTTSCCEEEEEEE-----------ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred cccCCCceEEEEeCCCCEEEEeecC-----------CCcccceEECCCCCEEEEEeCCCCeEEEEEecC
Confidence 24566666554333222111 13578899999763 5 4445678999999964
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=99.55 E-value=4.8e-14 Score=106.26 Aligned_cols=175 Identities=6% Similarity=-0.119 Sum_probs=113.8
Q ss_pred EEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceE-------------------EEEecCCCEEEE
Q psy7433 12 DFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASS-------------------LVFAPQHQLLIS 72 (213)
Q Consensus 12 ~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~l~~ 72 (213)
.+.|+|+|+.|+.+ +.++.|.+||+. ..+.......+...... +.|+|+++.++.
T Consensus 85 ~~~~spdg~~l~~~---~~~~~l~~~d~~---~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~ 158 (396)
T 3c5m_A 85 GGFISTDERAFFYV---KNELNLMKVDLE---TLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKF 158 (396)
T ss_dssp TCEECTTSSEEEEE---ETTTEEEEEETT---TCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHH
T ss_pred cceECCCCCEEEEE---EcCCcEEEEECC---CCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceee
Confidence 37899999999888 577789999984 33322222222221111 345667766554
Q ss_pred E-----cCCCcEEEEeccCceEEEecccCCCCeeEEEecC-CCCEEEEecCCC------cee------------------
Q psy7433 73 A-----GKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDP-HEEFFVTGAGDG------DIK------------------ 122 (213)
Q Consensus 73 ~-----~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~------~i~------------------ 122 (213)
. ..+..|.+||+.+++..... .+...+..+.|+| ++..++..+.+. .+.
T Consensus 159 ~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~ 237 (396)
T 3c5m_A 159 AEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEG 237 (396)
T ss_dssp HHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTT
T ss_pred eeeccCCCcceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCC
Confidence 3 35678999999888765444 3566788999999 788776655432 222
Q ss_pred eceEEEEEccCCceEEEecCC-----CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCC-CCe-EEEEe---
Q psy7433 123 SPVKCLAIDPHEEFFVTGAGD-----GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG-GSR-LFSCG--- 192 (213)
Q Consensus 123 ~~v~~~~~~~~~~~l~~~~~d-----g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~-l~s~~--- 192 (213)
..+..+.|+|+|++|+.++.+ +.|++||+.+++........ ... +.|+| ++. +++.+
T Consensus 238 ~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~------------~~~-~~~s~~dg~~l~~~~~~~ 304 (396)
T 3c5m_A 238 ESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMP------------PCS-HLMSNFDGSLMVGDGCDA 304 (396)
T ss_dssp EEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECC------------SEE-EEEECSSSSEEEEEECCC
T ss_pred ccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCC------------CCC-CCccCCCCceEEEecCCc
Confidence 136678999999987776543 34999999877654322221 123 78888 765 44433
Q ss_pred -------------cCCcEEEEeCCCCc
Q psy7433 193 -------------ADGSMKVRQLPDRD 206 (213)
Q Consensus 193 -------------~d~~i~iw~~~~~~ 206 (213)
.+..|++||+.+++
T Consensus 305 p~~~~~~~~~~~~~~~~i~~~d~~~~~ 331 (396)
T 3c5m_A 305 PVDVADADSYNIENDPFLYVLNTKAKS 331 (396)
T ss_dssp ----------CCCCCCEEEEEETTTTB
T ss_pred ceeeccccccccCCCCcEEEEecccCc
Confidence 34789999997664
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=2.6e-11 Score=87.78 Aligned_cols=183 Identities=8% Similarity=0.088 Sum_probs=129.5
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeee--eecCCceEEEEecCCCEEEEEcCCCcEE
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV--CHDQGASSLVFAPQHQLLISAGKKGDIC 80 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 80 (213)
+..+...+.++++.++|+++++. ..++.|.+||.. .. ...+. .....+..++++++++++++...++.|.
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~---~~~~~v~~~d~~----~~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~ 81 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQ---HKANMISCINLD----GK-ITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIG 81 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEE---TTTTEEEEECTT----CC-EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEE
T ss_pred CCCcCCCccceEECCCCCEEEEe---cCCCcEEEEcCC----CC-eEEecCCcccCceeeEEECCCCCEEEeCCCCCeEE
Confidence 34556789999999999988877 457899999973 22 22222 2346788999999999888877788999
Q ss_pred EEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCC
Q psy7433 81 VIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGD 143 (213)
Q Consensus 81 iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~d 143 (213)
.||.........+......+..+++.|++..+++...++.+. ..+..++++++++++++...+
T Consensus 82 ~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~ 161 (299)
T 2z2n_A 82 RITKKGIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITDDGKIREYELPNKGSYPSFITLGSDNALWFTENQN 161 (299)
T ss_dssp EECTTSCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSCEEEEETTT
T ss_pred EECCCCcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECCCCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCC
Confidence 999863222222223455788999999998777765554442 347889999999888777777
Q ss_pred CcEEEEEccCCeeeee-ecCCCCceeEEEecCCCeEEEEeCCCCeEEEEe-cCCcEEEEeCCCC
Q psy7433 144 GDIKVWSLSGNHLLYN-FPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCG-ADGSMKVRQLPDR 205 (213)
Q Consensus 144 g~i~v~d~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~-~d~~i~iw~~~~~ 205 (213)
+.|..||. +++.... .... ...+..+++++++.+..+. .++.|.+|+. ++
T Consensus 162 ~~i~~~~~-~g~~~~~~~~~~----------~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g 213 (299)
T 2z2n_A 162 NAIGRITE-SGDITEFKIPTP----------ASGPVGITKGNDDALWFVEIIGNKIGRITT-SG 213 (299)
T ss_dssp TEEEEECT-TCCEEEEECSST----------TCCEEEEEECTTSSEEEEETTTTEEEEECT-TC
T ss_pred CEEEEEcC-CCcEEEeeCCCC----------CCcceeEEECCCCCEEEEccCCceEEEECC-CC
Confidence 89999998 5544332 2211 1468889999876655444 5778999998 44
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=99.53 E-value=6.7e-12 Score=91.22 Aligned_cols=179 Identities=11% Similarity=0.065 Sum_probs=120.6
Q ss_pred ccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeee----ecCCceEEEEecCCCEEEE----Ec-
Q psy7433 4 QCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVC----HDQGASSLVFAPQHQLLIS----AG- 74 (213)
Q Consensus 4 ~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~----~~- 74 (213)
..+...+.+++++|+|+++++. ..++.|.+||.. +++....... ....+..++++|+|+++++ +.
T Consensus 65 ~~~~~~~~~l~~~~dg~l~v~~---~~~~~i~~~d~~---~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~ 138 (296)
T 3e5z_A 65 MHPSHHQNGHCLNKQGHLIACS---HGLRRLERQREP---GGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGID 138 (296)
T ss_dssp ESSCSSEEEEEECTTCCEEEEE---TTTTEEEEECST---TCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHH
T ss_pred ECCCCCcceeeECCCCcEEEEe---cCCCeEEEEcCC---CCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccc
Confidence 3456778999999999988887 567899999973 3322222111 1235678999999998887 33
Q ss_pred ------------CCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-------e------------
Q psy7433 75 ------------KKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-------S------------ 123 (213)
Q Consensus 75 ------------~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-------~------------ 123 (213)
..+.|..++.. ++. ..+.........++|+|+++.+++.+.++.+. .
T Consensus 139 ~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~ 216 (296)
T 3e5z_A 139 KPEEGYGGEMELPGRWVFRLAPD-GTL-SAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVE 216 (296)
T ss_dssp CGGGSSCCCCCSSSCEEEEECTT-SCE-EEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCS
T ss_pred cccccccccccCCCcEEEEECCC-CCE-EEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCC
Confidence 13456666654 433 33444556678999999999886666665554 0
Q ss_pred --ceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEe-CCCC-eEEEEecCCcEEE
Q psy7433 124 --PVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHV-DGGS-RLFSCGADGSMKV 199 (213)
Q Consensus 124 --~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~-~l~s~~~d~~i~i 199 (213)
.+..++++++|+++++. ++.|.+||.. ++.+..+..+. . +.+++| .|++ .|++++.+ .+.-
T Consensus 217 ~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~~~----------~-~~~~~f~~~d~~~L~v~t~~-~l~~ 281 (296)
T 3e5z_A 217 PGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVLTPQ----------T-TSNLCFGGPEGRTLYMTVST-EFWS 281 (296)
T ss_dssp SSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEECSS----------C-CCEEEEESTTSCEEEEEETT-EEEE
T ss_pred CCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEECCC----------C-ceeEEEECCCCCEEEEEcCC-eEEE
Confidence 12478899999866665 7889999986 66777776654 4 888888 4654 57776665 4555
Q ss_pred EeCCCC
Q psy7433 200 RQLPDR 205 (213)
Q Consensus 200 w~~~~~ 205 (213)
++..+.
T Consensus 282 ~~~~~~ 287 (296)
T 3e5z_A 282 IETNVR 287 (296)
T ss_dssp EECSCC
T ss_pred EEcccc
Confidence 555554
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=99.51 E-value=3.6e-12 Score=94.54 Aligned_cols=169 Identities=8% Similarity=0.088 Sum_probs=112.5
Q ss_pred eEEEEEeCCCCeEEEeecc------------------------CCCccEEEEeCCCcccccceeeeeeecCCceEEEEec
Q psy7433 10 TSDFVFLGSCSLVATAGHS------------------------SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP 65 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~------------------------s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 65 (213)
+..++|+|+|+.|+.+... .....|.+||+. .++.+..+.. . .+..+.|+|
T Consensus 106 ~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~---~~~~~~~l~~-~-~~~~~~~sp 180 (347)
T 2gop_A 106 IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTE---SEEVIEEFEK-P-RFSSGIWHR 180 (347)
T ss_dssp EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETT---TTEEEEEEEE-E-TTCEEEEET
T ss_pred ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECC---CCeEEeeecC-C-CcccccCCC
Confidence 8899999999998887310 003578999984 3333244444 3 789999999
Q ss_pred CCCEEEEEcCCC-------cEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCC--------cee--------
Q psy7433 66 QHQLLISAGKKG-------DICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDG--------DIK-------- 122 (213)
Q Consensus 66 ~~~~l~~~~~d~-------~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~--------~i~-------- 122 (213)
++ +++++..+. ...+|.+.+++.. .+..+ ..+..+ +|+++.++..+.+. .+.
T Consensus 181 dg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~ 255 (347)
T 2gop_A 181 DK-IVVNVPHREIIPQYFKFWDIYIWEDGKEE-KMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYDGKEVM 255 (347)
T ss_dssp TE-EEEEEECCCSSCCSSCCEEEEEEETTEEE-EEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEECSSCEE
T ss_pred Ce-EEEEEecccccccccccccEEEeCCCceE-EeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEECCCceE
Confidence 99 777775542 3455544455443 33323 444443 89999887766432 121
Q ss_pred -------eceEE-EEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecC
Q psy7433 123 -------SPVKC-LAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGAD 194 (213)
Q Consensus 123 -------~~v~~-~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d 194 (213)
..+.. +.|+ ++ ++++++.++.+++| +.+++..... .+. ..|.+++|+| ..+++++.+
T Consensus 256 ~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~~~-~~~----------~~v~~~~~s~-~~~~~~~~~ 320 (347)
T 2gop_A 256 GILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKPIA-KGR----------HWIMGFDVDE-IVVYLKETA 320 (347)
T ss_dssp ESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEEEE-CSS----------SEEEEEEESS-SEEEEEECS
T ss_pred eccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEEEe-cCC----------CeEEeeeeeC-cEEEEEcCC
Confidence 34565 8899 88 88999999999999 8755443333 222 5789999999 777777777
Q ss_pred CcE-EEEeCC
Q psy7433 195 GSM-KVRQLP 203 (213)
Q Consensus 195 ~~i-~iw~~~ 203 (213)
+.. .+|.+.
T Consensus 321 ~~~~~l~~~~ 330 (347)
T 2gop_A 321 TRLRELFTWD 330 (347)
T ss_dssp SSCCEEEEES
T ss_pred CChHHheEeC
Confidence 665 777765
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=99.50 E-value=9e-12 Score=92.05 Aligned_cols=180 Identities=10% Similarity=0.054 Sum_probs=124.7
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeec-----CCceEEEEecCCCEEEEEc--CCCcE
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHD-----QGASSLVFAPQHQLLISAG--KKGDI 79 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~--~d~~v 79 (213)
......++++++++.+++. ..++.|.+||. .+.+....+.... .....+++ . +..|+.+. .++.|
T Consensus 83 ~~~p~~i~~~~~g~lyv~~---~~~~~v~~iD~---~t~~~~~~i~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v 154 (328)
T 3dsm_A 83 FTSPRYIHFLSDEKAYVTQ---IWDYRIFIINP---KTYEITGYIECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRI 154 (328)
T ss_dssp CSSEEEEEEEETTEEEEEE---BSCSEEEEEET---TTTEEEEEEECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEE
T ss_pred CCCCcEEEEeCCCeEEEEE---CCCCeEEEEEC---CCCeEEEEEEcCCccccCCCcceEEE-E-CCEEEEEcCCCCCEE
Confidence 3567889999998665555 36899999998 4555555554322 14556777 3 44555544 48899
Q ss_pred EEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCC----------Ccee------------------eceEEEEEc
Q psy7433 80 CVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGD----------GDIK------------------SPVKCLAID 131 (213)
Q Consensus 80 ~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~----------~~i~------------------~~v~~~~~~ 131 (213)
.++|+.+++....+.. ......+.++|++++++++..+ +.+. ..+..++|+
T Consensus 155 ~viD~~t~~~~~~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~ 233 (328)
T 3dsm_A 155 LKIDTETDKVVDELTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLN 233 (328)
T ss_dssp EEEETTTTEEEEEEEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEEC
T ss_pred EEEECCCCeEEEEEEc-CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEe
Confidence 9999999988877764 3445789999999877776654 4443 247889999
Q ss_pred cCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCC-CCeEE-EE----ecCCcEEEEeCCCC
Q psy7433 132 PHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG-GSRLF-SC----GADGSMKVRQLPDR 205 (213)
Q Consensus 132 ~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~-s~----~~d~~i~iw~~~~~ 205 (213)
|+++++.++.. .|.+||..+++......... .+.....++++| ++.|+ +. ..++.|.+||.. +
T Consensus 234 ~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~--------~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g 302 (328)
T 3dsm_A 234 GTRDTLYWINN--DIWRMPVEADRVPVRPFLEF--------RDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-G 302 (328)
T ss_dssp TTSCEEEEESS--SEEEEETTCSSCCSSCSBCC--------CSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-C
T ss_pred cCCCEEEEEcc--EEEEEECCCCceeeeeeecC--------CCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-C
Confidence 99998887765 89999998776532111000 025688999998 56554 44 467899999987 5
Q ss_pred c
Q psy7433 206 D 206 (213)
Q Consensus 206 ~ 206 (213)
+
T Consensus 303 ~ 303 (328)
T 3dsm_A 303 K 303 (328)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=1.1e-10 Score=84.44 Aligned_cols=182 Identities=9% Similarity=0.029 Sum_probs=124.8
Q ss_pred ccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEecc
Q psy7433 6 HNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLR 85 (213)
Q Consensus 6 h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~ 85 (213)
....+.++++.|+++++++. ..++.|.+||.. .... ..........+..++++++++++++...++.|..||.
T Consensus 97 ~~~~~~~i~~~~~g~l~v~~---~~~~~i~~~d~~--g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~- 169 (299)
T 2z2n_A 97 PDSAPYGITEGPNGDIWFTE---MNGNRIGRITDD--GKIR-EYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE- 169 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEE---TTTTEEEEECTT--CCEE-EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-
T ss_pred cCCCceeeEECCCCCEEEEe---cCCceEEEECCC--CCEE-EecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-
Confidence 34568899999999888877 567899999962 1111 1111223456889999999988887777789999998
Q ss_pred CceEEEe-cccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCCCcEE
Q psy7433 86 QRVIRSR-FNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDGDIK 147 (213)
Q Consensus 86 ~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg~i~ 147 (213)
+++.... .......+..++++++++.+++...++.+. ..+.+++++++|+++++...++.|.
T Consensus 170 ~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~ 249 (299)
T 2z2n_A 170 SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITTSGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIG 249 (299)
T ss_dssp TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEE
T ss_pred CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECCCCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEE
Confidence 6654432 333445688999999988766665444433 4578899999998777766788999
Q ss_pred EEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCC
Q psy7433 148 VWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 148 v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 205 (213)
.||. +++. ..+..... ...+.++++ +++.|..+...+.+..++..++
T Consensus 250 ~~d~-~g~~-~~~~~~~~--------~~~~~~i~~-~~g~l~v~~~~~~l~~~~~~~~ 296 (299)
T 2z2n_A 250 RLTS-NNII-EEYPIQIK--------SAEPHGICF-DGETIWFAMECDKIGKLTLIKD 296 (299)
T ss_dssp EEET-TTEE-EEEECSSS--------SCCEEEEEE-CSSCEEEEETTTEEEEEEEC--
T ss_pred EECC-CCce-EEEeCCCC--------CCccceEEe-cCCCEEEEecCCcEEEEEcCcc
Confidence 9998 4432 23321110 146888999 8777766655777888887654
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=99.49 E-value=4.3e-11 Score=88.40 Aligned_cols=180 Identities=9% Similarity=0.058 Sum_probs=124.9
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCc
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR 87 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~ 87 (213)
.....+.+. +++++++. ..++.|.+||. .+.+.+..+. .......++++++++..++...++.|.+||..++
T Consensus 44 ~~~~~i~~~-~~~lyv~~---~~~~~v~viD~---~t~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~ 115 (328)
T 3dsm_A 44 DVAQSMVIR-DGIGWIVV---NNSHVIFAIDI---NTFKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTY 115 (328)
T ss_dssp SCEEEEEEE-TTEEEEEE---GGGTEEEEEET---TTCCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTT
T ss_pred ccceEEEEE-CCEEEEEE---cCCCEEEEEEC---cccEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCC
Confidence 345677774 34455555 46789999998 5666666664 3466889999999854444447899999999999
Q ss_pred eEEEecccCC-----CCeeEEEecCCCCEEEEec-CCCcee----------------eceEEEEEccCCceEEEecCC--
Q psy7433 88 VIRSRFNAHE-----SPVKCLAIDPHEEFFVTGA-GDGDIK----------------SPVKCLAIDPHEEFFVTGAGD-- 143 (213)
Q Consensus 88 ~~~~~~~~~~-----~~i~~~~~~~~~~~l~~~~-~~~~i~----------------~~v~~~~~~~~~~~l~~~~~d-- 143 (213)
+....+.... .....+++ .+++.+++.. .++.+. ..+..+.++|+|+++++...+
T Consensus 116 ~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~ 194 (328)
T 3dsm_A 116 EITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYE 194 (328)
T ss_dssp EEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCT
T ss_pred eEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCcc
Confidence 8877665332 14567777 3344444433 355554 345778999999977777654
Q ss_pred --------CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCC-CeEEEEecCCcEEEEeCCCCcc
Q psy7433 144 --------GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG-SRLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 144 --------g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~d~~i~iw~~~~~~~ 207 (213)
+.|.++|..+++....+.... +.....++++|+ ++|+++.. .|.+||..+++.
T Consensus 195 ~~~~~~~~~~v~~id~~t~~v~~~~~~~~---------g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~ 256 (328)
T 3dsm_A 195 GSPYGYEAPSLYRIDAETFTVEKQFKFKL---------GDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRV 256 (328)
T ss_dssp TCSSCBCCCEEEEEETTTTEEEEEEECCT---------TCCCEEEEECTTSCEEEEESS--SEEEEETTCSSC
T ss_pred CCccccCCceEEEEECCCCeEEEEEecCC---------CCCceeEEEecCCCEEEEEcc--EEEEEECCCCce
Confidence 789999999888776665432 136889999985 45665544 899999987654
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=6.5e-12 Score=101.93 Aligned_cols=183 Identities=11% Similarity=0.051 Sum_probs=122.1
Q ss_pred eEEEEEeCCCCeEEEeeccCCCcc----------------EEEEeCCCcccc-cceeeeeeecCCceEEEEecCCCEEEE
Q psy7433 10 TSDFVFLGSCSLVATAGHSSESKN----------------VCLWDSLLPQKK-ALVQAFVCHDQGASSLVFAPQHQLLIS 72 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~s~~~~----------------i~iwd~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~ 72 (213)
+..++|+|||+.|+.+ +.++. |++|++..+... ..+.....+...+..+.|+|+|++|+.
T Consensus 173 ~~~~~wspDg~~l~~~---~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~ 249 (710)
T 2xdw_A 173 FSCMAWTHDGKGMFYN---AYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLL 249 (710)
T ss_dssp SCCEEECTTSSEEEEE---ECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEE
T ss_pred cceEEEEeCCCEEEEE---EECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEE
Confidence 5679999999999988 44444 999998532211 111121223445778999999999887
Q ss_pred EcC-----CCcEEEEeccC------ce-EEEecccCCCCeeEEEecCCCCEEEEecCCC----cee--------------
Q psy7433 73 AGK-----KGDICVIDLRQ------RV-IRSRFNAHESPVKCLAIDPHEEFFVTGAGDG----DIK-------------- 122 (213)
Q Consensus 73 ~~~-----d~~v~iwd~~~------~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~----~i~-------------- 122 (213)
.+. +..|.+||+.+ +. ....+..+...+.. .|+|+++.|+..+..+ .+.
T Consensus 250 ~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~ 328 (710)
T 2xdw_A 250 SIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKV 328 (710)
T ss_dssp EEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEE
T ss_pred EEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccee
Confidence 654 56899999986 42 34445444444443 4778887766554432 121
Q ss_pred -------eceEEEEEccCCceEEEecCCCc--EEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEE-EE
Q psy7433 123 -------SPVKCLAIDPHEEFFVTGAGDGD--IKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLF-SC 191 (213)
Q Consensus 123 -------~~v~~~~~~~~~~~l~~~~~dg~--i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~-s~ 191 (213)
..+..+.|++++.++++...++. |.+||+.+++.+..+..+. ..+..+.++|++ .++ +.
T Consensus 329 l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~----------~~v~~~~~s~d~~~l~~~~ 398 (710)
T 2xdw_A 329 LVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEV----------GSVVGYSGQKKDTEIFYQF 398 (710)
T ss_dssp EECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCS----------SEEEEEECCTTCSEEEEEE
T ss_pred ccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCC----------ceEEEEecCCCCCEEEEEE
Confidence 14677889887888888888885 5666776777666666553 578889998865 433 32
Q ss_pred e---cCCcEEEEeCCCCc
Q psy7433 192 G---ADGSMKVRQLPDRD 206 (213)
Q Consensus 192 ~---~d~~i~iw~~~~~~ 206 (213)
+ ..+.+++||+.+++
T Consensus 399 ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 399 TSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp ECSSCCCEEEEEETTSSS
T ss_pred eCCCCCCEEEEEECCCCc
Confidence 2 45789999998765
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=6.3e-11 Score=93.48 Aligned_cols=185 Identities=14% Similarity=0.114 Sum_probs=127.1
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEe----cCCCEEEEEcC-CCcEEEE
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFA----PQHQLLISAGK-KGDICVI 82 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~~~-d~~v~iw 82 (213)
..+..+.|+|+|++++++ +.++.|.+||+.. .+.+.+..+.. ......++|+ |+|+++++++. ++.+.++
T Consensus 197 ~~p~~v~~SpDGr~lyv~---~~dg~V~viD~~~-~t~~~v~~i~~-G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~Vi 271 (567)
T 1qks_A 197 YAVHISRLSASGRYLFVI---GRDGKVNMIDLWM-KEPTTVAEIKI-GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIM 271 (567)
T ss_dssp SCEEEEEECTTSCEEEEE---ETTSEEEEEETTS-SSCCEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEE
T ss_pred CCccceEECCCCCEEEEE---cCCCeEEEEECCC-CCCcEeEEEec-CCCCceeEEccccCCCCCEEEEEEccCCeEEEE
Confidence 346689999999999988 5789999999831 14455566553 3346789999 69998887764 5899999
Q ss_pred eccCceEEEecccC-----------CCCeeEEEecCCCCEEEEe-cCCCcee------------------eceEEEEEcc
Q psy7433 83 DLRQRVIRSRFNAH-----------ESPVKCLAIDPHEEFFVTG-AGDGDIK------------------SPVKCLAIDP 132 (213)
Q Consensus 83 d~~~~~~~~~~~~~-----------~~~i~~~~~~~~~~~l~~~-~~~~~i~------------------~~v~~~~~~~ 132 (213)
|..+.+.+..+... ...+..+..++++..+++. ...+.+. .....+.|+|
T Consensus 272 D~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~p 351 (567)
T 1qks_A 272 DGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDG 351 (567)
T ss_dssp ETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECT
T ss_pred ECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECC
Confidence 99999888766521 1256778888876554443 3344442 2345788999
Q ss_pred CCceEEEec-CCCcEEEEEccCCeeeeeecC-CCCceeEEEecCCCeEEEEeCCC-CeE-EEEe-cCCcEEEEeCCC
Q psy7433 133 HEEFFVTGA-GDGDIKVWSLSGNHLLYNFPG-EHARSSFFKHIGQGVTQLHVDGG-SRL-FSCG-ADGSMKVRQLPD 204 (213)
Q Consensus 133 ~~~~l~~~~-~dg~i~v~d~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~-~~l-~s~~-~d~~i~iw~~~~ 204 (213)
++++++++. .++.|.++|+.+++.+..+.. ...+ +.+..+. + ++|+ +.+ ++.. .++.|.++|..+
T Consensus 352 dgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~P-----hpg~g~~-~-~~p~~g~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 352 SHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTP-----HPGRGAN-F-VHPTFGPVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp TSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSB-----CCTTCEE-E-EETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred CCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCC-----CCcccee-e-ECCCCCcEEEeCCCCCCeEEEecCCC
Confidence 999876654 578999999999988777654 2211 0011222 2 4665 444 4443 468999999886
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.44 E-value=1.9e-11 Score=99.70 Aligned_cols=183 Identities=13% Similarity=0.068 Sum_probs=114.5
Q ss_pred ccCceEEEEEeCCCCeEEEeecc--CCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCc-----
Q psy7433 6 HNKITSDFVFLGSCSLVATAGHS--SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGD----- 78 (213)
Q Consensus 6 h~~~v~~~~~~~~~~~l~~~g~~--s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~----- 78 (213)
|...+..++|+|||++||.+... +....|++||+. .++.+.. ..+...+..++|+|+ +.|+.++.++.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~---tg~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~ 235 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVA---DGKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQA 235 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETT---TCCEEEE-EEEEEESCCCEESTT-SEEEEEECCCC-----
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECC---CCCCCCc-cCCCceeccEEEECC-CEEEEEEecCcccccc
Confidence 33468889999999999987310 111469999994 3433322 112223467899999 88888776554
Q ss_pred ---------EEEEeccCce----EEEecccCCCCeeEEEecCCCCEEEEecCCC-----cee------e--c-eEEE---
Q psy7433 79 ---------ICVIDLRQRV----IRSRFNAHESPVKCLAIDPHEEFFVTGAGDG-----DIK------S--P-VKCL--- 128 (213)
Q Consensus 79 ---------v~iwd~~~~~----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~-----~i~------~--~-v~~~--- 128 (213)
|++|++.++. .+.....+...+..+.|+|+|++++..+.++ .+. . . ...+
T Consensus 236 ~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~ 315 (741)
T 1yr2_A 236 FQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPD 315 (741)
T ss_dssp ---CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECS
T ss_pred cccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCC
Confidence 8899987664 2322223334588999999999888776543 222 1 1 2221
Q ss_pred ------EEccCCceEEEecC----CCcEEEEEccCC--eeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCc
Q psy7433 129 ------AIDPHEEFFVTGAG----DGDIKVWSLSGN--HLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGS 196 (213)
Q Consensus 129 ------~~~~~~~~l~~~~~----dg~i~v~d~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~ 196 (213)
.++|+|+.|+..+. ++.|.+||+.++ +....+..+. ..+..+.+..+..+++...|+.
T Consensus 316 ~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~----------~~l~~~~~~~~~lv~~~~~dg~ 385 (741)
T 1yr2_A 316 LKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESK----------DNLESVGIAGNRLFASYIHDAK 385 (741)
T ss_dssp SSSCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCS----------SEEEEEEEEBTEEEEEEEETTE
T ss_pred CCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCC----------CeEEEEEEECCEEEEEEEECCE
Confidence 23467777766654 345999998764 3333333222 3466777775556788888988
Q ss_pred EEEEeCC
Q psy7433 197 MKVRQLP 203 (213)
Q Consensus 197 i~iw~~~ 203 (213)
.+||.+.
T Consensus 386 ~~l~~~~ 392 (741)
T 1yr2_A 386 SQVLAFD 392 (741)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 7777554
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=99.43 E-value=2.3e-10 Score=85.93 Aligned_cols=182 Identities=10% Similarity=-0.002 Sum_probs=117.4
Q ss_pred EEEEeCCCCeEEEeecc-------CCCccEEEEeCCCcccccceeeeeee-------cCCceEEEEecCCCEEEEEcC--
Q psy7433 12 DFVFLGSCSLVATAGHS-------SESKNVCLWDSLLPQKKALVQAFVCH-------DQGASSLVFAPQHQLLISAGK-- 75 (213)
Q Consensus 12 ~~~~~~~~~~l~~~g~~-------s~~~~i~iwd~~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~-- 75 (213)
.++++|||++++.+... ..++.|.+||. .+.+.+..+... ......++|+|+|++|+.++.
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~---~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~ 146 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDP---VTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAA 146 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEEC---CCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCC
Confidence 88999999999887210 03578999998 455555544321 123458899999999998874
Q ss_pred CCcEEEEeccCceEEEe-cccCCC-------CeeEEEecCCCCEEEE---------------------------------
Q psy7433 76 KGDICVIDLRQRVIRSR-FNAHES-------PVKCLAIDPHEEFFVT--------------------------------- 114 (213)
Q Consensus 76 d~~v~iwd~~~~~~~~~-~~~~~~-------~i~~~~~~~~~~~l~~--------------------------------- 114 (213)
++.|.++| .+++.+.. +..... .-.-+.++++++.++.
T Consensus 147 ~~~v~viD-~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 225 (373)
T 2mad_H 147 GPAVGLVV-QGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSG 225 (373)
T ss_pred CCeEEEEE-CCCCEEeEEcCCCceEEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEeccccccCCcceeecceeEecCC
Confidence 47899999 99888777 542110 0001122222221111
Q ss_pred ----ecCCCcee-----------------------------eceEEEEEccCCceEEEecC----------CCcEEEEEc
Q psy7433 115 ----GAGDGDIK-----------------------------SPVKCLAIDPHEEFFVTGAG----------DGDIKVWSL 151 (213)
Q Consensus 115 ----~~~~~~i~-----------------------------~~v~~~~~~~~~~~l~~~~~----------dg~i~v~d~ 151 (213)
.+..+.+. .....+.++|+++.+.++.. .+.|.++|+
T Consensus 226 ~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~ 305 (373)
T 2mad_H 226 RIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTG 305 (373)
T ss_pred EEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEEC
Confidence 11111111 01122678888886666543 357999999
Q ss_pred cCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe--EEEEe-cCCcEEEEeCCCCccc
Q psy7433 152 SGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR--LFSCG-ADGSMKVRQLPDRDAV 208 (213)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--l~s~~-~d~~i~iw~~~~~~~~ 208 (213)
.+.+.+..+... ....+++|+|++. ++++. .++.|.++|..+.+..
T Consensus 306 ~t~~vv~~i~~g-----------~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv 354 (373)
T 2mad_H 306 LVGQTSSQISLG-----------HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQD 354 (373)
T ss_pred CCCEEEEEEECC-----------CCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEE
Confidence 999998888653 4588999999754 66666 5899999999988654
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=99.41 E-value=1.4e-09 Score=78.60 Aligned_cols=177 Identities=6% Similarity=0.042 Sum_probs=124.5
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeee--eecCCceEEEEecCCCEEEEEcCCCcEEEEec
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV--CHDQGASSLVFAPQHQLLISAGKKGDICVIDL 84 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~ 84 (213)
...+.++++.++++++++. ..++.|..+|.. .+. ..+. .....+..+++.++++++++...++.|..+|.
T Consensus 61 ~~~~~~i~~~~~g~l~v~~---~~~~~v~~~d~~----g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~ 132 (300)
T 2qc5_A 61 DAKVMCLIVSSLGDIWFTE---NGANKIGKLSKK----GGF-TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTA 132 (300)
T ss_dssp TCCEEEEEECTTSCEEEEE---TTTTEEEEECTT----SCE-EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT
T ss_pred CCcceeEEECCCCCEEEEe---cCCCeEEEECCC----CCe-EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECC
Confidence 3578899999999988877 567889999973 222 2222 12356889999999988888777889999998
Q ss_pred cCceEEE-ecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCCCcE
Q psy7433 85 RQRVIRS-RFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDGDI 146 (213)
Q Consensus 85 ~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg~i 146 (213)
. ++... .+......+..+++.++++.+++...++.+. ..+..++++++++++++....+.|
T Consensus 133 ~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i 211 (300)
T 2qc5_A 133 D-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITNTGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKI 211 (300)
T ss_dssp T-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEE
T ss_pred C-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECCCCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEE
Confidence 7 54432 2333456788999999998666655454443 347789999999877777777889
Q ss_pred EEEEccCCeeeee-ecCCCCceeEEEecCCCeEEEEeCCCCeEEEEe-cCCcEEEEeCC
Q psy7433 147 KVWSLSGNHLLYN-FPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCG-ADGSMKVRQLP 203 (213)
Q Consensus 147 ~v~d~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~-~d~~i~iw~~~ 203 (213)
.+||. +++.... +... ...+.++++++++.|..+. .++.|..|+..
T Consensus 212 ~~~~~-~g~~~~~~~~~~----------~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~ 259 (300)
T 2qc5_A 212 GRITT-TGEISEYDIPTP----------NARPHAITAGKNSEIWFTEWGANQIGRITND 259 (300)
T ss_dssp EEECT-TCCEEEEECSST----------TCCEEEEEECSTTCEEEEETTTTEEEEECTT
T ss_pred EEEcC-CCcEEEEECCCC----------CCCceEEEECCCCCEEEeccCCCeEEEECCC
Confidence 99998 4433222 2211 1568899999877655554 46889999873
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=99.40 E-value=1.8e-09 Score=78.06 Aligned_cols=180 Identities=8% Similarity=0.052 Sum_probs=125.6
Q ss_pred ccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCccccccee-eeeeecCCceEEEEecCCCEEEEEcCCCcEEEEec
Q psy7433 6 HNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQ-AFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDL 84 (213)
Q Consensus 6 h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~ 84 (213)
....+.++.+.++|+++++. ..++.|.+||.. .+... .+......+..++++++++++++...++.|..||.
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~---~~~~~v~~~~~~----~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~ 90 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQ---HKANKISSLDQS----GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSK 90 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEE---TTTTEEEEECTT----SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred CCCCcceeeECCCCCEEEEc---CCCCeEEEECCC----CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECC
Confidence 45678999999999988877 568899999973 22221 11222356889999999988887777889999998
Q ss_pred cCceEE-EecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCCCcE
Q psy7433 85 RQRVIR-SRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDGDI 146 (213)
Q Consensus 85 ~~~~~~-~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg~i 146 (213)
. ++.. .........+..+++.++++.+++...++.+. ..+..++++++++++++...++.|
T Consensus 91 ~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i 169 (300)
T 2qc5_A 91 K-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTADGTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSI 169 (300)
T ss_dssp T-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEE
T ss_pred C-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCCCCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeE
Confidence 7 5433 22232346788999999998777765554442 457888999999977777667889
Q ss_pred EEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEe-cCCcEEEEeCC
Q psy7433 147 KVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCG-ADGSMKVRQLP 203 (213)
Q Consensus 147 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~-~d~~i~iw~~~ 203 (213)
..+|. +++... +..... ...+..+++++++.|..+. ..+.|.+|+..
T Consensus 170 ~~~~~-~g~~~~-~~~~~~--------~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~ 217 (300)
T 2qc5_A 170 GRITN-TGKLEE-YPLPTN--------AAAPVGITSGNDGALWFVEIMGNKIGRITTT 217 (300)
T ss_dssp EEECT-TCCEEE-EECSST--------TCCEEEEEECTTSSEEEEETTTTEEEEECTT
T ss_pred EEECC-CCcEEE-eeCCCC--------CCCcceEEECCCCCEEEEccCCCEEEEEcCC
Confidence 99998 444332 222111 1468899999877655554 45679999873
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=1.7e-10 Score=91.06 Aligned_cols=172 Identities=13% Similarity=0.151 Sum_probs=122.7
Q ss_pred CCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEecc--CceEEEecc
Q psy7433 17 GSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLR--QRVIRSRFN 94 (213)
Q Consensus 17 ~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~--~~~~~~~~~ 94 (213)
|.+.++++. ..++.|.++|. .+.+.+..+.. ...+..+.|+|+++++++++.++.|.+||+. +++.+..+.
T Consensus 165 ~~~~~~V~~---~~~~~V~viD~---~t~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~ 237 (567)
T 1qks_A 165 LENLFSVTL---RDAGQIALIDG---STYEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIK 237 (567)
T ss_dssp GGGEEEEEE---TTTTEEEEEET---TTCCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEE
T ss_pred CCceEEEEe---CCCCeEEEEEC---CCCeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEe
Confidence 444455665 68999999998 56667766653 3456789999999999999999999999996 777777776
Q ss_pred cCCCCeeEEEec----CCCCEEEEecCC-Ccee----------------e------------ceEEEEEccCCc-eEEEe
Q psy7433 95 AHESPVKCLAID----PHEEFFVTGAGD-GDIK----------------S------------PVKCLAIDPHEE-FFVTG 140 (213)
Q Consensus 95 ~~~~~i~~~~~~----~~~~~l~~~~~~-~~i~----------------~------------~v~~~~~~~~~~-~l~~~ 140 (213)
. ......++++ |++++++++... +.+. . .+..+..++++. +++..
T Consensus 238 ~-G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~ 316 (567)
T 1qks_A 238 I-GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV 316 (567)
T ss_dssp C-CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEE
T ss_pred c-CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEe
Confidence 4 3446799999 699988887654 3332 0 345566677655 45555
Q ss_pred cCCCcEEEEEccCCee--eeeecCCCCceeEEEecCCCeEEEEeCCCCe-E-EEEecCCcEEEEeCCCCcc
Q psy7433 141 AGDGDIKVWSLSGNHL--LYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-L-FSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 141 ~~dg~i~v~d~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l-~s~~~d~~i~iw~~~~~~~ 207 (213)
..+|.|.++|....+. +..+.. +.....+.|+|+++ + ++...++.|.++|+.+++.
T Consensus 317 ~~~g~v~~vd~~~~~~~~v~~i~~-----------~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl 376 (567)
T 1qks_A 317 KETGKILLVDYTDLNNLKTTEISA-----------ERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKL 376 (567)
T ss_dssp TTTTEEEEEETTCSSEEEEEEEEC-----------CSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEE
T ss_pred cCCCeEEEEecCCCccceeeeeec-----------cccccCceECCCCCEEEEEeCCCCeEEEEECCCCcE
Confidence 6678999999865432 222222 14577889999764 4 4455688999999998753
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=99.39 E-value=7.6e-10 Score=80.75 Aligned_cols=182 Identities=10% Similarity=0.085 Sum_probs=119.9
Q ss_pred cCceEEEEEeCCCCeEEE-------eeccCCCccEEEEeCCCcccccceeeeee-----ecCCceEEEEecC-CCEEEEE
Q psy7433 7 NKITSDFVFLGSCSLVAT-------AGHSSESKNVCLWDSLLPQKKALVQAFVC-----HDQGASSLVFAPQ-HQLLISA 73 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~-------~g~~s~~~~i~iwd~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~-~~~l~~~ 73 (213)
-....+++|+++++++++ . ..++.|.+||.. .++. ..+.. +...+..++++++ ++++++.
T Consensus 17 ~~~~~~~~~~~~g~l~~~~~~~~~~~---~~~~~i~~~d~~---~g~~-~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~ 89 (314)
T 1pjx_A 17 IPGAEGPVFDKNGDFYIVAPEVEVNG---KPAGEILRIDLK---TGKK-TVICKPEVNGYGGIPAGCQCDRDANQLFVAD 89 (314)
T ss_dssp CTTCEEEEECTTSCEEEEETTCEETT---EECCEEEEECTT---TCCE-EEEECCEETTEECCEEEEEECSSSSEEEEEE
T ss_pred CCCccCceECCCCCEEEEEeccccCC---CCCCEEEEEeCC---CCcE-EEEEecccCCCCCCCceEEEecCCCcEEEEE
Confidence 345678999999998888 4 367899999973 2222 22222 4467899999999 7655555
Q ss_pred cCCCcEEEEeccCceEEEe-ccc----CCCCeeEEEecCCCCEEEEecCC---------------Ccee-----------
Q psy7433 74 GKKGDICVIDLRQRVIRSR-FNA----HESPVKCLAIDPHEEFFVTGAGD---------------GDIK----------- 122 (213)
Q Consensus 74 ~~d~~v~iwd~~~~~~~~~-~~~----~~~~i~~~~~~~~~~~l~~~~~~---------------~~i~----------- 122 (213)
. ...|.+||.. ++.... ... ....+..++++|+++.+++...+ +.+.
T Consensus 90 ~-~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~ 167 (314)
T 1pjx_A 90 M-RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQMIQV 167 (314)
T ss_dssp T-TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCEEEE
T ss_pred C-CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCCCCEEEe
Confidence 4 4478899988 665433 221 12347899999999877776543 2222
Q ss_pred ----eceEEEEEc----cCCceEE-EecCCCcEEEEEcc-CCee-----eeeecCCCCceeEEEecCCCeEEEEeCCCCe
Q psy7433 123 ----SPVKCLAID----PHEEFFV-TGAGDGDIKVWSLS-GNHL-----LYNFPGEHARSSFFKHIGQGVTQLHVDGGSR 187 (213)
Q Consensus 123 ----~~v~~~~~~----~~~~~l~-~~~~dg~i~v~d~~-~~~~-----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 187 (213)
.....++|+ |+++.+. +...++.|.+||+. +++. ...+..+. ...+..+++++++.
T Consensus 168 ~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~---------~~~p~~i~~d~~G~ 238 (314)
T 1pjx_A 168 DTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTH---------EGGADGMDFDEDNN 238 (314)
T ss_dssp EEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCS---------SCEEEEEEEBTTCC
T ss_pred ccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCC---------CCCCCceEECCCCC
Confidence 245788999 9997554 44567899999986 4432 12222110 03467899998776
Q ss_pred E-EEEecCCcEEEEeCCCCc
Q psy7433 188 L-FSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 188 l-~s~~~d~~i~iw~~~~~~ 206 (213)
+ ++...++.|.+||..+++
T Consensus 239 l~v~~~~~~~i~~~d~~~g~ 258 (314)
T 1pjx_A 239 LLVANWGSSHIEVFGPDGGQ 258 (314)
T ss_dssp EEEEEETTTEEEEECTTCBS
T ss_pred EEEEEcCCCEEEEEcCCCCc
Confidence 5 444567899999987553
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=99.37 E-value=1.6e-09 Score=78.80 Aligned_cols=181 Identities=15% Similarity=0.256 Sum_probs=118.0
Q ss_pred cCceEEEEEeCCCC-eEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEecc
Q psy7433 7 NKITSDFVFLGSCS-LVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLR 85 (213)
Q Consensus 7 ~~~v~~~~~~~~~~-~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~ 85 (213)
..-.-+..|+|++. ++++. ..++.|..||.. .... ..+ .....+.+++++++++++++. ++.|.+||..
T Consensus 12 ~~~~Egp~w~~~~~~l~~~d---~~~~~i~~~d~~---~~~~-~~~-~~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~ 81 (297)
T 3g4e_A 12 CRCGESPVWEEVSNSLLFVD---IPAKKVCRWDSF---TKQV-QRV-TMDAPVSSVALRQSGGYVATI--GTKFCALNWK 81 (297)
T ss_dssp CSBEEEEEEETTTTEEEEEE---TTTTEEEEEETT---TCCE-EEE-ECSSCEEEEEEBTTSSEEEEE--TTEEEEEETT
T ss_pred CccccCCeEECCCCEEEEEE---CCCCEEEEEECC---CCcE-EEE-eCCCceEEEEECCCCCEEEEE--CCeEEEEECC
Confidence 34456788999655 55554 578999999973 2222 222 245678999999999955554 5689999998
Q ss_pred CceEEEeccc----CCCCeeEEEecCCCCEEEEecCC-----------Ccee---------------eceEEEEEccCCc
Q psy7433 86 QRVIRSRFNA----HESPVKCLAIDPHEEFFVTGAGD-----------GDIK---------------SPVKCLAIDPHEE 135 (213)
Q Consensus 86 ~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~~~~~-----------~~i~---------------~~v~~~~~~~~~~ 135 (213)
+++....... ....+..++++|+++++++.... +.+. .....++|+|+++
T Consensus 82 ~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~ 161 (297)
T 3g4e_A 82 EQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHK 161 (297)
T ss_dssp TTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSC
T ss_pred CCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCC
Confidence 8765432221 12347889999999966654221 2222 3467899999998
Q ss_pred eE-EEecCCCcEEEEEc--cCCee-----eeeecCCCCceeEEEecCCCeEEEEeCCCCeEEE-EecCCcEEEEeCCCCc
Q psy7433 136 FF-VTGAGDGDIKVWSL--SGNHL-----LYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFS-CGADGSMKVRQLPDRD 206 (213)
Q Consensus 136 ~l-~~~~~dg~i~v~d~--~~~~~-----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s-~~~d~~i~iw~~~~~~ 206 (213)
.| ++.+.++.|.+||+ .++.. ...+... ...+..+++++++.|.. ...++.|..||..+++
T Consensus 162 ~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~----------~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~ 231 (297)
T 3g4e_A 162 IFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKE----------EQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGK 231 (297)
T ss_dssp EEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGG----------GCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCC
T ss_pred EEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCC----------CCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCce
Confidence 65 55566789999997 34432 1111111 14578899998776544 4456789999988664
Q ss_pred c
Q psy7433 207 A 207 (213)
Q Consensus 207 ~ 207 (213)
.
T Consensus 232 ~ 232 (297)
T 3g4e_A 232 R 232 (297)
T ss_dssp E
T ss_pred E
Confidence 3
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=99.37 E-value=5e-10 Score=81.75 Aligned_cols=180 Identities=11% Similarity=0.095 Sum_probs=120.9
Q ss_pred ccCceEEEEEeCC-CCeEEEeeccCCCccEEEEeCCCcccccceee-ee----eecCCceEEEEecCCCEEEEEcCC---
Q psy7433 6 HNKITSDFVFLGS-CSLVATAGHSSESKNVCLWDSLLPQKKALVQA-FV----CHDQGASSLVFAPQHQLLISAGKK--- 76 (213)
Q Consensus 6 h~~~v~~~~~~~~-~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~-~~----~~~~~v~~~~~~~~~~~l~~~~~d--- 76 (213)
+...+.+++++++ ++++++. ....|.+||.+ ++.... .. .....+..++++++++++++...+
T Consensus 69 ~~~~~~~i~~~~~~g~l~v~~----~~~~l~~~d~~----g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~ 140 (314)
T 1pjx_A 69 YGGIPAGCQCDRDANQLFVAD----MRLGLLVVQTD----GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVA 140 (314)
T ss_dssp EECCEEEEEECSSSSEEEEEE----TTTEEEEEETT----SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCT
T ss_pred CCCCCceEEEecCCCcEEEEE----CCCCEEEEeCC----CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccc
Confidence 5567899999999 8767665 34478899973 222111 11 112357899999999888777654
Q ss_pred ------------CcEEEEeccCceEEEecccCCCCeeEEEec----CCCCEEEEe-cCCCcee-----------------
Q psy7433 77 ------------GDICVIDLRQRVIRSRFNAHESPVKCLAID----PHEEFFVTG-AGDGDIK----------------- 122 (213)
Q Consensus 77 ------------~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~----~~~~~l~~~-~~~~~i~----------------- 122 (213)
+.|..||.. ++..... ........++++ |+++.++++ ..++.+.
T Consensus 141 ~~~~~~~~~~~~~~l~~~~~~-g~~~~~~-~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~ 218 (314)
T 1pjx_A 141 PADYTRSMQEKFGSIYCFTTD-GQMIQVD-TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWG 218 (314)
T ss_dssp TSCCCBTTSSSCEEEEEECTT-SCEEEEE-EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEE
T ss_pred cccccccccCCCCeEEEECCC-CCEEEec-cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEE
Confidence 567777765 5433222 233446788999 988655444 3334332
Q ss_pred -------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEE-ec
Q psy7433 123 -------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSC-GA 193 (213)
Q Consensus 123 -------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~-~~ 193 (213)
..+..++++++|+++++...++.|.+||.++++.+..+..+. ..+.+++++|++. |+.+ ..
T Consensus 219 ~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~----------~~~~~i~~~~dg~~l~v~~~~ 288 (314)
T 1pjx_A 219 HIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPF----------EKPSNLHFKPQTKTIFVTEHE 288 (314)
T ss_dssp ECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSS----------SCEEEEEECTTSSEEEEEETT
T ss_pred ECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCC----------CCceeEEECCCCCEEEEEeCC
Confidence 125678889999988887778899999988666655555442 5689999988764 5444 45
Q ss_pred CCcEEEEeCCCC
Q psy7433 194 DGSMKVRQLPDR 205 (213)
Q Consensus 194 d~~i~iw~~~~~ 205 (213)
++.|..|++...
T Consensus 289 ~~~l~~~~~~~~ 300 (314)
T 1pjx_A 289 NNAVWKFEWQRN 300 (314)
T ss_dssp TTEEEEEECSSC
T ss_pred CCeEEEEeCCCC
Confidence 679999998754
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=99.37 E-value=6.2e-10 Score=84.65 Aligned_cols=189 Identities=13% Similarity=0.130 Sum_probs=121.9
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCC--cEEEEecc
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKG--DICVIDLR 85 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~v~iwd~~ 85 (213)
.....++|+|+++++++. ..++.|++||.. ......... ...... ++|+++++.|+++..++ .|.+++..
T Consensus 131 ~~P~~la~d~~g~lyv~d---~~~~~I~~id~~---~g~~~~~~~-~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~ 202 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQ---RDDPRVRLISVD---DNKVTTVHP-GFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKA 202 (409)
T ss_dssp CCEEEEEECSTTEEEEEE---TTTTEEEEEETT---TTEEEEEEE-TCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGG
T ss_pred CCceEEEEeCCCCEEEEe---cCCCcEEEEECC---CCEEEEeec-cCCCCc-eeEecCCCcEEEEecCCCceEEEEEcC
Confidence 468899999999988877 577999999973 333332222 223334 99999999999888766 78888887
Q ss_pred CceEEEec---cc-CCCCeeEEEecCCCCEEEEecCCCcee---------e-------------ceE-EEEEccC-CceE
Q psy7433 86 QRVIRSRF---NA-HESPVKCLAIDPHEEFFVTGAGDGDIK---------S-------------PVK-CLAIDPH-EEFF 137 (213)
Q Consensus 86 ~~~~~~~~---~~-~~~~i~~~~~~~~~~~l~~~~~~~~i~---------~-------------~v~-~~~~~~~-~~~l 137 (213)
.+.....+ .. ....+.+++++|++..|+++..++.+. . ... .++|+|+ +.++
T Consensus 203 ~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~ly 282 (409)
T 3hrp_A 203 SGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFY 282 (409)
T ss_dssp GTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEE
T ss_pred CCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEE
Confidence 65433333 12 445678999999555555566666554 0 013 8999995 6666
Q ss_pred EEecCCCcEEEEEccCCeeeeeecCCC-Cce-eE---EEecCCCeEEEEeCCCCeE-EEEe-cCCcEEEEeCCCCc
Q psy7433 138 VTGAGDGDIKVWSLSGNHLLYNFPGEH-ARS-SF---FKHIGQGVTQLHVDGGSRL-FSCG-ADGSMKVRQLPDRD 206 (213)
Q Consensus 138 ~~~~~dg~i~v~d~~~~~~~~~~~~~~-~~~-~~---~~~~~~~v~~~~~~~~~~l-~s~~-~d~~i~iw~~~~~~ 206 (213)
++-..++.|+.|+.... ...+.+.. ... .. ....-.....+++++++.| ++-. .++.|+.|++.++.
T Consensus 283 v~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~ 356 (409)
T 3hrp_A 283 MSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGY 356 (409)
T ss_dssp EEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTE
T ss_pred EEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCE
Confidence 67777889999987543 22222211 000 00 0000135789999997654 4555 67899999976653
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=99.36 E-value=1.3e-10 Score=87.03 Aligned_cols=137 Identities=15% Similarity=0.125 Sum_probs=86.5
Q ss_pred EEEEeCCCCeEEEeec-------cCCCccEEEEeCCCcccccceeeeeeec-------CCceEEEEecCCCEEEEEcC--
Q psy7433 12 DFVFLGSCSLVATAGH-------SSESKNVCLWDSLLPQKKALVQAFVCHD-------QGASSLVFAPQHQLLISAGK-- 75 (213)
Q Consensus 12 ~~~~~~~~~~l~~~g~-------~s~~~~i~iwd~~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~~~-- 75 (213)
.++++|+|++++.+.. +..++.|.+||. .+.+.+..+.... .....++|+|+|++++.+..
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~---~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~ 158 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDP---VTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSP 158 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT---TTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSS
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEEC---CCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCC
Confidence 3999999998877620 003578999998 5666666664321 24667999999999988764
Q ss_pred CCcEEEEeccCceEEEecccCCC-------CeeEEEecCCCCEEEEecCC-Ccee-----------ece-EEEEEc-cCC
Q psy7433 76 KGDICVIDLRQRVIRSRFNAHES-------PVKCLAIDPHEEFFVTGAGD-GDIK-----------SPV-KCLAID-PHE 134 (213)
Q Consensus 76 d~~v~iwd~~~~~~~~~~~~~~~-------~i~~~~~~~~~~~l~~~~~~-~~i~-----------~~v-~~~~~~-~~~ 134 (213)
++.|.++|+.+++.+..+..... .-.-++.+++|+++.+.... +.+. .++ ....|. ++|
T Consensus 159 ~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG 238 (386)
T 3sjl_D 159 APAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAG 238 (386)
T ss_dssp SCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTT
T ss_pred CCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCC
Confidence 68999999999988877753211 00113666777766666544 4441 111 112443 455
Q ss_pred ceEEEecCCCcEEEEEcc
Q psy7433 135 EFFVTGAGDGDIKVWSLS 152 (213)
Q Consensus 135 ~~l~~~~~dg~i~v~d~~ 152 (213)
++++ .+.+|.+++.|+.
T Consensus 239 ~~~~-vs~~g~V~v~d~~ 255 (386)
T 3sjl_D 239 RLVW-PTYTGKIHQIDLS 255 (386)
T ss_dssp EEEE-EBTTSEEEEEECT
T ss_pred cEEE-EeCCCEEEEEECC
Confidence 4433 4446777777764
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=99.34 E-value=1.1e-10 Score=88.66 Aligned_cols=183 Identities=10% Similarity=0.077 Sum_probs=121.2
Q ss_pred EEEEeCCCCeEEEeecc-------CCCccEEEEeCCCcccccceeeeeee-------cCCceEEEEecCCCEEEEEcC--
Q psy7433 12 DFVFLGSCSLVATAGHS-------SESKNVCLWDSLLPQKKALVQAFVCH-------DQGASSLVFAPQHQLLISAGK-- 75 (213)
Q Consensus 12 ~~~~~~~~~~l~~~g~~-------s~~~~i~iwd~~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~-- 75 (213)
.+.++||++.++.+... ..++.|.++|. .+.+.+..+... ......++|+|+|++++.+..
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~---~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~ 198 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDP---VTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSP 198 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT---TTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSS
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEEC---CCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCC
Confidence 79999999988887200 03678999998 566666665432 234567899999999998864
Q ss_pred CCcEEEEeccCceEEEecccCCC-------CeeEEEecCCCCEEEEecCC------------------------------
Q psy7433 76 KGDICVIDLRQRVIRSRFNAHES-------PVKCLAIDPHEEFFVTGAGD------------------------------ 118 (213)
Q Consensus 76 d~~v~iwd~~~~~~~~~~~~~~~-------~i~~~~~~~~~~~l~~~~~~------------------------------ 118 (213)
++.|.+.|+.+++.+..+..... .-.-+.++++++.+++...+
T Consensus 199 ~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~ 278 (426)
T 3c75_H 199 APAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGR 278 (426)
T ss_dssp SCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCE
T ss_pred CCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCE
Confidence 57899999999988776653110 01123445555544333322
Q ss_pred -------Ccee-----------------------------eceEEEEEccCCceEEEecC----------CCcEEEEEcc
Q psy7433 119 -------GDIK-----------------------------SPVKCLAIDPHEEFFVTGAG----------DGDIKVWSLS 152 (213)
Q Consensus 119 -------~~i~-----------------------------~~v~~~~~~~~~~~l~~~~~----------dg~i~v~d~~ 152 (213)
+.+. .....++++|+++.+++... .+.|.++|+.
T Consensus 279 ~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~ 358 (426)
T 3c75_H 279 LVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAE 358 (426)
T ss_dssp EEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETT
T ss_pred EEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECC
Confidence 2111 00111677887775555432 3468888888
Q ss_pred CCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC--eEEEEe-cCCcEEEEeCCCCccc
Q psy7433 153 GNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS--RLFSCG-ADGSMKVRQLPDRDAV 208 (213)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~-~d~~i~iw~~~~~~~~ 208 (213)
+.+.+..+... .....+.++|++ ++++.. .++.|.++|..+.+.+
T Consensus 359 T~kvv~~I~vg-----------~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv 406 (426)
T 3c75_H 359 TGERINKIELG-----------HEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEEL 406 (426)
T ss_dssp TCCEEEEEEEE-----------EEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEE
T ss_pred CCeEEEEEECC-----------CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEE
Confidence 88888877653 358889999965 466666 5899999999988654
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=99.32 E-value=7.1e-10 Score=80.68 Aligned_cols=159 Identities=10% Similarity=0.059 Sum_probs=105.4
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeee-----cCCceEEEEecCCCEEEEEcC------
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCH-----DQGASSLVFAPQHQLLISAGK------ 75 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~------ 75 (213)
...+.+++++|+|+++++. +..|.+||.+ +.+. ..+... ...++.++++|+|+++++...
T Consensus 53 ~~~~~~i~~~~dG~l~v~~-----~~~l~~~d~~---~g~~-~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~ 123 (297)
T 3g4e_A 53 DAPVSSVALRQSGGYVATI-----GTKFCALNWK---EQSA-VVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPA 123 (297)
T ss_dssp SSCEEEEEEBTTSSEEEEE-----TTEEEEEETT---TTEE-EEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTT
T ss_pred CCceEEEEECCCCCEEEEE-----CCeEEEEECC---CCcE-EEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccc
Confidence 4678999999999966654 5679999974 2222 122111 234788999999996665422
Q ss_pred ---CCcEEEEeccC-ceEEEecccCCCCeeEEEecCCCCEEEEe-cCCCcee------------------------eceE
Q psy7433 76 ---KGDICVIDLRQ-RVIRSRFNAHESPVKCLAIDPHEEFFVTG-AGDGDIK------------------------SPVK 126 (213)
Q Consensus 76 ---d~~v~iwd~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~~~~i~------------------------~~v~ 126 (213)
...-.+|.+.. ++... +.........++|+|+++.++.+ +.++.+. ..+.
T Consensus 124 ~~~~~~~~l~~~d~~g~~~~-~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~ 202 (297)
T 3g4e_A 124 VLERHQGALYSLFPDHHVKK-YFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPD 202 (297)
T ss_dssp BCCTTCEEEEEECTTSCEEE-EEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEE
T ss_pred cccCCCcEEEEEECCCCEEE-EeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCC
Confidence 12334555442 33222 22233456789999999866443 3333332 2357
Q ss_pred EEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeC-CC
Q psy7433 127 CLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVD-GG 185 (213)
Q Consensus 127 ~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~ 185 (213)
.++++++|++.++....+.|..||..+++.+..+..+. ..+++++|. |+
T Consensus 203 g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~----------~~~t~~~f~g~d 252 (297)
T 3g4e_A 203 GMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPV----------DKTTSCCFGGKN 252 (297)
T ss_dssp EEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSS----------SBEEEEEEESGG
T ss_pred eeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCC----------CCceEEEEeCCC
Confidence 78999999877777777889999998888888887654 568999997 54
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.31 E-value=6.3e-11 Score=95.98 Aligned_cols=181 Identities=7% Similarity=-0.048 Sum_probs=113.9
Q ss_pred EEEEEeCCCCeEEEeeccCCCcc-------------EEEEeCCCcccc-cceeeeeeecCCceEEEEecCCCEEEEEcCC
Q psy7433 11 SDFVFLGSCSLVATAGHSSESKN-------------VCLWDSLLPQKK-ALVQAFVCHDQGASSLVFAPQHQLLISAGKK 76 (213)
Q Consensus 11 ~~~~~~~~~~~l~~~g~~s~~~~-------------i~iwd~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 76 (213)
..++|+|||+.|+.+ +.+.. |++|++..+... ..+.....+...+..+.|+|+|++|+..+.+
T Consensus 171 ~~~~wspDg~~l~~~---~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~ 247 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYE---WLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILR 247 (695)
T ss_dssp CCCEECTTSSEEEEE---ECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEE
T ss_pred cceEEecCCCEEEEE---EecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeC
Confidence 678999999999988 45554 999998533221 2232333344578899999999998887765
Q ss_pred C----cEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecC---CCcee---------------------eceEEE
Q psy7433 77 G----DICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAG---DGDIK---------------------SPVKCL 128 (213)
Q Consensus 77 ~----~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---~~~i~---------------------~~v~~~ 128 (213)
+ .|.+|+..+++.. .+..+........+ +++..++.... ++.+. ..+..+
T Consensus 248 ~~~~~~l~~~~~~~~~~~-~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~ 325 (695)
T 2bkl_A 248 GWSENDVYWKRPGEKDFR-LLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSV 325 (695)
T ss_dssp TTTEEEEEEECTTCSSCE-EEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEE
T ss_pred CCCceEEEEEcCCCCceE-EeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEE
Confidence 5 6777776555433 33334444455555 45553333321 22222 235667
Q ss_pred EEccCCceEEEecCCCcEEEEEcc-CCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEE-EE---ecCCcEEEEeC
Q psy7433 129 AIDPHEEFFVTGAGDGDIKVWSLS-GNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLF-SC---GADGSMKVRQL 202 (213)
Q Consensus 129 ~~~~~~~~l~~~~~dg~i~v~d~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~-s~---~~d~~i~iw~~ 202 (213)
+|+ ++.++++...|+..++|.+. .++....+..+.. ..+..+.++|++ .++ +. ...+.|++||+
T Consensus 326 ~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~---------~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~ 395 (695)
T 2bkl_A 326 SIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGV---------GAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSV 395 (695)
T ss_dssp EEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSS---------SEECCCBSCTTCSEEEEEEEETTEEEEEEEEET
T ss_pred EEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCC---------eEEEEeecCCCCCEEEEEEcCCCCCCEEEEEEC
Confidence 777 66788888899988888665 3444555544321 457777888754 443 22 24578999999
Q ss_pred CCCc
Q psy7433 203 PDRD 206 (213)
Q Consensus 203 ~~~~ 206 (213)
.+++
T Consensus 396 ~~g~ 399 (695)
T 2bkl_A 396 STGK 399 (695)
T ss_dssp TTCC
T ss_pred CCCc
Confidence 8764
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=99.30 E-value=2.9e-09 Score=79.04 Aligned_cols=178 Identities=12% Similarity=0.155 Sum_probs=119.3
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCC-----CccEEEEeCCCcccccceeeeeee------cCCceEEEEecCCCEE-EE
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSE-----SKNVCLWDSLLPQKKALVQAFVCH------DQGASSLVFAPQHQLL-IS 72 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~-----~~~i~iwd~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l-~~ 72 (213)
+|...+..++++++++++++- .. +..|.+||+ .+.+.++.+... ...+..+++++++..+ ++
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D---~g~~~~~~~~i~~~d~---~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvt 137 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLD---NGNQSKSVPKLVAWDT---LNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYIS 137 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEE---CHHHHTSCCEEEEEET---TTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEE
T ss_pred cceeEeeEEEEcCCCcEEEEc---CCCCcCCCCeEEEEEC---CCCeEEEEEECChhhcccccccceEEEecCCCEEEEE
Confidence 355789999999999877764 22 478999998 344444444322 2346899999865444 44
Q ss_pred Ec---CCCcEEEEeccCceEEEecccCC-----------------------------CCeeEEEecCCCCEEEEecCCC-
Q psy7433 73 AG---KKGDICVIDLRQRVIRSRFNAHE-----------------------------SPVKCLAIDPHEEFFVTGAGDG- 119 (213)
Q Consensus 73 ~~---~d~~v~iwd~~~~~~~~~~~~~~-----------------------------~~i~~~~~~~~~~~l~~~~~~~- 119 (213)
-. .++.|.+||+.+++..+.+..|. ..+..++++|+++.|+++...+
T Consensus 138 d~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~ 217 (343)
T 2qe8_A 138 DPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHST 217 (343)
T ss_dssp ECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCS
T ss_pred cCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCC
Confidence 44 57899999998877655443210 2357899999999888776554
Q ss_pred cee---------------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEe
Q psy7433 120 DIK---------------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKH 172 (213)
Q Consensus 120 ~i~---------------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~ 172 (213)
.+. .....++++++|.++++...++.|.+||..+++.........
T Consensus 218 ~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~-------- 289 (343)
T 2qe8_A 218 SMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEK-------- 289 (343)
T ss_dssp EEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGG--------
T ss_pred eEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCc--------
Confidence 111 134569999999999988889999999985565433222211
Q ss_pred cCCCeEEEEeCCCCe-EEEEecCCcE
Q psy7433 173 IGQGVTQLHVDGGSR-LFSCGADGSM 197 (213)
Q Consensus 173 ~~~~v~~~~~~~~~~-l~s~~~d~~i 197 (213)
...+.++++.+++. +++.+..+.+
T Consensus 290 -~~~p~~va~~~~g~l~v~~~~~~~~ 314 (343)
T 2qe8_A 290 -LSWTDSFNFGSDGYLYFDCNQLHHS 314 (343)
T ss_dssp -GSCEEEEEECTTSCEEEEECCGGGS
T ss_pred -eecCCeeEECCCCcEEEEeCccccc
Confidence 14688999988765 4444433333
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=99.28 E-value=3.6e-09 Score=80.45 Aligned_cols=183 Identities=6% Similarity=0.025 Sum_probs=115.4
Q ss_pred EEEeCCCCeEEEeeccCCCc--cEEEEeCCCcccccceeee---ee-ecCCceEEEEecCCCEEEEEcCCCcEEEEeccC
Q psy7433 13 FVFLGSCSLVATAGHSSESK--NVCLWDSLLPQKKALVQAF---VC-HDQGASSLVFAPQHQLLISAGKKGDICVIDLRQ 86 (213)
Q Consensus 13 ~~~~~~~~~l~~~g~~s~~~--~i~iwd~~~~~~~~~~~~~---~~-~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~ 86 (213)
++|+|+++.|+.+ ..++ .|.+++.. .......+ .. ....+.+++++|++..|+.+..++.|..||..+
T Consensus 176 ia~~~~g~~l~~~---d~~~~~~I~~~d~~---~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~ 249 (409)
T 3hrp_A 176 PAVTKDKQRVYSI---GWEGTHTVYVYMKA---SGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKT 249 (409)
T ss_dssp CEECTTSSEEEEE---BSSTTCEEEEEEGG---GTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTT
T ss_pred eeEecCCCcEEEE---ecCCCceEEEEEcC---CCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCC
Confidence 8899999988887 4444 78888863 22222222 11 345678899999555566677788999999987
Q ss_pred ceEEEe----cccCCCCe-e-EEEecCC-CCEEEEecCCCcee------------------------------eceEEEE
Q psy7433 87 RVIRSR----FNAHESPV-K-CLAIDPH-EEFFVTGAGDGDIK------------------------------SPVKCLA 129 (213)
Q Consensus 87 ~~~~~~----~~~~~~~i-~-~~~~~~~-~~~l~~~~~~~~i~------------------------------~~v~~~~ 129 (213)
+..... ..+....- . .++++|+ +..+++-..++.|. ..+..++
T Consensus 250 ~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia 329 (409)
T 3hrp_A 250 QEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMT 329 (409)
T ss_dssp CCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEE
T ss_pred CCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEE
Confidence 653222 22222222 3 8999995 55555555555554 1277899
Q ss_pred EccCCceEEEec-CCCcEEEEEccCCeeeeeecCCCCceeEE-----EecCCCeEEEEeCCCCeE-EEEecCCcEEEEeC
Q psy7433 130 IDPHEEFFVTGA-GDGDIKVWSLSGNHLLYNFPGEHARSSFF-----KHIGQGVTQLHVDGGSRL-FSCGADGSMKVRQL 202 (213)
Q Consensus 130 ~~~~~~~l~~~~-~dg~i~v~d~~~~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~l-~s~~~d~~i~iw~~ 202 (213)
++|+|+++++-+ .++.|+.||+.++...... ++....... ...-.....+++++++.| ++-..++.|+.+++
T Consensus 330 ~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~-g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 330 VDEDGNFYIVDGFKGYCLRKLDILDGYVSTVA-GQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp ECTTCCEEEEETTTTCEEEEEETTTTEEEEEE-ECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred EeCCCCEEEEeCCCCCEEEEEECCCCEEEEEe-CCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 999999888877 8899999998777643322 220000000 000145889999997764 55556678887765
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.27 E-value=4.4e-09 Score=76.74 Aligned_cols=179 Identities=13% Similarity=0.112 Sum_probs=115.9
Q ss_pred ccCceEEEEEeCCCCe-EEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEec
Q psy7433 6 HNKITSDFVFLGSCSL-VATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDL 84 (213)
Q Consensus 6 h~~~v~~~~~~~~~~~-l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~ 84 (213)
+........|+|+++. +++. ..++.|..|+.. +. ...+..+...+..++++++|+++++...++.|..|+.
T Consensus 43 ~~~~~egp~~~~~g~~l~~~d---~~~~~i~~~~~~----g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~ 114 (305)
T 3dr2_A 43 QATWSEGPAWWEAQRTLVWSD---LVGRRVLGWRED----GT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDA 114 (305)
T ss_dssp CCSSEEEEEEEGGGTEEEEEE---TTTTEEEEEETT----SC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred CCcCccCCeEeCCCCEEEEEE---CCCCEEEEEeCC----CC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECC
Confidence 3445678899999984 4554 678999999862 22 3444555677899999999997776666688999998
Q ss_pred cCceEEEeccc----CCCCeeEEEecCCCCEEEE----ecC-------------CCcee---------------eceEEE
Q psy7433 85 RQRVIRSRFNA----HESPVKCLAIDPHEEFFVT----GAG-------------DGDIK---------------SPVKCL 128 (213)
Q Consensus 85 ~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~----~~~-------------~~~i~---------------~~v~~~ 128 (213)
. ++....... ....+..++++|+++.+++ +.. .+.+. .....+
T Consensus 115 ~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~p~gl 193 (305)
T 3dr2_A 115 D-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMADLDHPNGL 193 (305)
T ss_dssp T-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEEEESSEEEE
T ss_pred C-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEecCCCCcce
Confidence 6 543222111 1134678999999998776 321 12222 234678
Q ss_pred EEccCCceEEEecCC------CcEEEEEccCCeee--eeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEE
Q psy7433 129 AIDPHEEFFVTGAGD------GDIKVWSLSGNHLL--YNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVR 200 (213)
Q Consensus 129 ~~~~~~~~l~~~~~d------g~i~v~d~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw 200 (213)
+|+|+++.|+.+... +.|.+||+...... ..+.... ......+++++++.|.++..+ .|.+|
T Consensus 194 ~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~---------~~~pdgi~~d~~G~lwv~~~~-gv~~~ 263 (305)
T 3dr2_A 194 AFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVP---------DGLPDGFCVDRGGWLWSSSGT-GVCVF 263 (305)
T ss_dssp EECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCS---------SSCCCSEEECTTSCEEECCSS-EEEEE
T ss_pred EEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECC---------CCCCCeEEECCCCCEEEecCC-cEEEE
Confidence 999999977776554 78999998754310 1111000 134556788887776666644 48888
Q ss_pred eCC
Q psy7433 201 QLP 203 (213)
Q Consensus 201 ~~~ 203 (213)
+..
T Consensus 264 ~~~ 266 (305)
T 3dr2_A 264 DSD 266 (305)
T ss_dssp CTT
T ss_pred CCC
Confidence 874
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=99.27 E-value=2e-10 Score=86.18 Aligned_cols=117 Identities=11% Similarity=0.107 Sum_probs=91.3
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEec
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDL 84 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~ 84 (213)
.+.+ |+.++| ++++|+++ .++.|++||++. .........+...+.++.+.+. .++++..||.|.+||+
T Consensus 86 ~lp~-V~~l~f--d~~~L~v~----~~~~l~v~dv~s---l~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl 153 (388)
T 1xip_A 86 EIPD-VIFVCF--HGDQVLVS----TRNALYSLDLEE---LSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDL 153 (388)
T ss_dssp ECTT-EEEEEE--ETTEEEEE----ESSEEEEEESSS---TTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEET
T ss_pred eCCC-eeEEEE--CCCEEEEE----cCCcEEEEEchh---hhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEc
Confidence 4556 999999 89999998 679999999953 3344455667778888887654 3888899999999999
Q ss_pred cCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee----------------------------eceEEEEEccCCce
Q psy7433 85 RQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----------------------------SPVKCLAIDPHEEF 136 (213)
Q Consensus 85 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------------------~~v~~~~~~~~~~~ 136 (213)
.+++... +...|+|++|+|+| ++.+..|+.++ ..|.++.|.+++.+
T Consensus 154 ~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~f 227 (388)
T 1xip_A 154 RTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDF 227 (388)
T ss_dssp TTCCEEE----EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEE
T ss_pred cCCcccc----ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeE
Confidence 9876543 34579999999999 56777777654 22888999999988
Q ss_pred EEE
Q psy7433 137 FVT 139 (213)
Q Consensus 137 l~~ 139 (213)
+++
T Consensus 228 lv~ 230 (388)
T 1xip_A 228 LAV 230 (388)
T ss_dssp EEE
T ss_pred EEE
Confidence 776
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=99.25 E-value=1.7e-08 Score=74.43 Aligned_cols=175 Identities=10% Similarity=0.072 Sum_probs=112.3
Q ss_pred eEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceE
Q psy7433 10 TSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVI 89 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~ 89 (213)
..+..|+|++..++..+ ..++.|..||.+ ..+ ...+. ....+.+++|+++++++++. .+ .|.+||..+++.
T Consensus 51 ~egp~~~~~~~~l~~~d--~~~~~i~~~d~~---~~~-~~~~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~ 121 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFN--ILERELHELHLA---SGR-KTVHA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVL 121 (326)
T ss_dssp EEEEEEETTTTEEEEEE--GGGTEEEEEETT---TTE-EEEEE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCE
T ss_pred CcCCeEeCCCCEEEEEE--CCCCEEEEEECC---CCc-EEEEE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcE
Confidence 46788999755444443 467899999973 222 22232 34678999999999877765 33 499999988765
Q ss_pred EEeccc----CCCCeeEEEecCCCCEEEEecC--------------CCcee------eceEEEEEccCCceEE-EecCCC
Q psy7433 90 RSRFNA----HESPVKCLAIDPHEEFFVTGAG--------------DGDIK------SPVKCLAIDPHEEFFV-TGAGDG 144 (213)
Q Consensus 90 ~~~~~~----~~~~i~~~~~~~~~~~l~~~~~--------------~~~i~------~~v~~~~~~~~~~~l~-~~~~dg 144 (213)
...... ....+..+.++|+++.+++... ++.+. .....++|+|+++.++ +.+.++
T Consensus 122 ~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~ 201 (326)
T 2ghs_A 122 TLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFADISIPNSICFSPDGTTGYFVDTKVN 201 (326)
T ss_dssp EEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEEEESSEEEEEECTTSCEEEEEETTTC
T ss_pred EEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEeCCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCC
Confidence 432221 1235789999999987665432 12221 2356889999998654 445678
Q ss_pred cEEEEEcc--CC-ee-----eeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEe-cCCcEEEEeCC
Q psy7433 145 DIKVWSLS--GN-HL-----LYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCG-ADGSMKVRQLP 203 (213)
Q Consensus 145 ~i~v~d~~--~~-~~-----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~-~d~~i~iw~~~ 203 (213)
.|.+||+. ++ .. ...+... ...+..+++++++.|..+. .++.|..|+..
T Consensus 202 ~I~~~d~~~~~Gl~~~~~~~~~~~~~~----------~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~ 259 (326)
T 2ghs_A 202 RLMRVPLDARTGLPTGKAEVFIDSTGI----------KGGMDGSVCDAEGHIWNARWGEGAVDRYDTD 259 (326)
T ss_dssp EEEEEEBCTTTCCBSSCCEEEEECTTS----------SSEEEEEEECTTSCEEEEEETTTEEEEECTT
T ss_pred EEEEEEcccccCCcccCceEEEECCCC----------CCCCCeeEECCCCCEEEEEeCCCEEEEECCC
Confidence 99999985 44 21 1122111 1356788898876654444 56789999874
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=99.24 E-value=5.5e-10 Score=83.59 Aligned_cols=151 Identities=9% Similarity=0.086 Sum_probs=100.5
Q ss_pred CCCeEEEeecc---CCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEc----------CCCcEEEEec
Q psy7433 18 SCSLVATAGHS---SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG----------KKGDICVIDL 84 (213)
Q Consensus 18 ~~~~l~~~g~~---s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~v~iwd~ 84 (213)
++++++....+ ..|+.|.+||. .+.+.+..+..+..+ .++|+|+++++++++ .++.|.+||.
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~---~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~ 88 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDY---TNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDA 88 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEET---TTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEET
T ss_pred CCCEEEEECCCCCccccCeEEEEEC---CCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEEC
Confidence 55555554210 13679999998 455666666655544 899999999999886 2567999999
Q ss_pred cCceEEEecccCCCCeeEEEecCCCCEEEEecCCCceeeceEEEEEccCCceEEEecC--CCcEEEEEccCCeeeee-ec
Q psy7433 85 RQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPHEEFFVTGAG--DGDIKVWSLSGNHLLYN-FP 161 (213)
Q Consensus 85 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~~~~l~~~~~--dg~i~v~d~~~~~~~~~-~~ 161 (213)
.+.+.+..+........ .+ ..+..++++|+|++|++++. ++.|.+||+.+++.+.. +.
T Consensus 89 ~t~~~~~~i~~~~~~~~------~g-------------~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~ 149 (361)
T 2oiz_A 89 DKLTFEKEISLPPKRVQ------GL-------------NYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTA 149 (361)
T ss_dssp TTCCEEEEEEECTTBCC------BC-------------CCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGG
T ss_pred cCCcEEEEEEcCccccc------cC-------------CCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEec
Confidence 98887776653211000 00 12345667777777777753 57899999999988877 65
Q ss_pred CCCCceeEEEecCCCeEEEEeCCCC--eEEEEecCCcEEEEeCCC
Q psy7433 162 GEHARSSFFKHIGQGVTQLHVDGGS--RLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 162 ~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~~d~~i~iw~~~~ 204 (213)
.. ....+.+.|++ .+++.+.||.+.+|++..
T Consensus 150 ~~------------~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~ 182 (361)
T 2oiz_A 150 AA------------GCWSVIPQPNRPRSFMTICGDGGLLTINLGE 182 (361)
T ss_dssp GT------------TEEEEEECTTSSSEEEEEETTSSEEEEEECT
T ss_pred CC------------CcceeEEcCCCCeeEEEECCCCcEEEEEECC
Confidence 42 22334455633 577788888888888764
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.24 E-value=2.9e-09 Score=77.73 Aligned_cols=167 Identities=14% Similarity=0.151 Sum_probs=109.2
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeee-----ecCCceEEEEecCCCEEEE----EcC
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVC-----HDQGASSLVFAPQHQLLIS----AGK 75 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~----~~~ 75 (213)
.+...+..++++++|+++++. ..++.|.+|+.+ ++ ...+.. ....+..++++++|+++++ |..
T Consensus 83 ~~~~~~~gl~~d~dG~l~v~~---~~~~~v~~~~~~----g~-~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~ 154 (305)
T 3dr2_A 83 DATAFTNGNAVDAQQRLVHCE---HGRRAITRSDAD----GQ-AHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLR 154 (305)
T ss_dssp ESCSCEEEEEECTTSCEEEEE---TTTTEEEEECTT----SC-EEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGS
T ss_pred CCCCccceeeECCCCCEEEEE---CCCCEEEEECCC----CC-EEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCcc
Confidence 345668899999999987776 456789999973 22 122211 1234678999999998876 332
Q ss_pred -------------CCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCC------Ccee--------------
Q psy7433 76 -------------KGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGD------GDIK-------------- 122 (213)
Q Consensus 76 -------------d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~------~~i~-------------- 122 (213)
.+.|..+|..+++..... .......++|+|+++.|+++... +.+.
T Consensus 155 ~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~ 232 (305)
T 3dr2_A 155 KPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRH 232 (305)
T ss_dssp CGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEE
T ss_pred ccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeE
Confidence 256777887666543332 33456789999999977776554 3443
Q ss_pred ------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCC
Q psy7433 123 ------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADG 195 (213)
Q Consensus 123 ------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~ 195 (213)
..+..++++++|++.+ ++.+ .|.+||. .++.+..+..+ ..+..++|.+++ .|..++.++
T Consensus 233 ~~~~~~~~pdgi~~d~~G~lwv-~~~~-gv~~~~~-~g~~~~~~~~~-----------~~~~~~~f~~d~~~L~it~~~~ 298 (305)
T 3dr2_A 233 FASVPDGLPDGFCVDRGGWLWS-SSGT-GVCVFDS-DGQLLGHIPTP-----------GTASNCTFDQAQQRLFITGGPC 298 (305)
T ss_dssp EECCSSSCCCSEEECTTSCEEE-CCSS-EEEEECT-TSCEEEEEECS-----------SCCCEEEECTTSCEEEEEETTE
T ss_pred EEECCCCCCCeEEECCCCCEEE-ecCC-cEEEECC-CCCEEEEEECC-----------CceeEEEEeCCCCEEEEEcCCe
Confidence 1123578888888444 4444 4889997 56666666554 247788898754 566666554
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.23 E-value=1.2e-12 Score=98.26 Aligned_cols=169 Identities=8% Similarity=0.065 Sum_probs=93.8
Q ss_pred CCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCC
Q psy7433 18 SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHE 97 (213)
Q Consensus 18 ~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~ 97 (213)
++..++++ +.|+.|..||. .+++.+..+.. ..+.+..+..++..+++++.|+.|+.||..+++.+..+..+.
T Consensus 8 ~~~~v~~g---s~dg~v~a~d~---~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~ 79 (369)
T 2hz6_A 8 PETLLFVS---TLDGSLHAVSK---RTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTI 79 (369)
T ss_dssp CTTEEEEE---ETTSEEEEEET---TTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCH
T ss_pred eCCEEEEE---cCCCEEEEEEC---CCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccC
Confidence 46677777 58999999998 56777766654 455555566777788888899999999999887665543221
Q ss_pred C-Cee-EEEecCCCCEEEEecCCCcee-------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecC
Q psy7433 98 S-PVK-CLAIDPHEEFFVTGAGDGDIK-------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPG 162 (213)
Q Consensus 98 ~-~i~-~~~~~~~~~~l~~~~~~~~i~-------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~ 162 (213)
. .+. ...+. .+..+++++.++.+. ..-....++|++..+++++.++.|+.||.++++.+..+..
T Consensus 80 ~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~ 158 (369)
T 2hz6_A 80 PELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATY 158 (369)
T ss_dssp HHHHTTCSCC------CCCCEEEEEEEEECCC----------------------EEEEEEEEEEECCCSSSSSCCCEEEE
T ss_pred ccccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCCcccccccCCEEEEEecCCEEEEEECCCCCEEEeEec
Confidence 1 000 00011 233444555555443 1111245567788899999999999999998887655542
Q ss_pred CCCceeEEEecCCCeEEEEeCC----CCeEEEEecCCcEEEEeCCCCcc
Q psy7433 163 EHARSSFFKHIGQGVTQLHVDG----GSRLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 163 ~~~~~~~~~~~~~~v~~~~~~~----~~~l~s~~~d~~i~iw~~~~~~~ 207 (213)
.. .....+.+ ++.+++++.||.++.||..+++.
T Consensus 159 ~~------------~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~ 195 (369)
T 2hz6_A 159 FD------------YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDV 195 (369)
T ss_dssp EE------------ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCE
T ss_pred cc------------ccCccccCCccccceEEEECCCCEEEEEECCCCcE
Confidence 11 11122232 25788889999999999988764
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=1.9e-09 Score=87.38 Aligned_cols=183 Identities=12% Similarity=0.120 Sum_probs=109.0
Q ss_pred cccCceEEEEEeCCCCeEEEeec--cCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCC-----
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGH--SSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKG----- 77 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~--~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~----- 77 (213)
+|...+..++|||||++||.+.. ++....|++||+. +++.+.. .........++|+ |++.|+.++.+.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~---tg~~~~~-~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~ 200 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVE---SKQPLET-PLKDVKFSGISWL-GNEGFFYSSYDKPDGSE 200 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETT---TCSEEEE-EEEEEESCCCEEE-TTTEEEEEESSCCC---
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECC---CCCCCcc-ccCCceeccEEEe-CCCEEEEEEecCccccc
Confidence 35567889999999999985321 0344689999994 4433322 1111123578899 999998887764
Q ss_pred --------cEEEEeccCce----EEEeccc-CCCCeeEEEecCCCCEEEEecCC----Ccee------------------
Q psy7433 78 --------DICVIDLRQRV----IRSRFNA-HESPVKCLAIDPHEEFFVTGAGD----GDIK------------------ 122 (213)
Q Consensus 78 --------~v~iwd~~~~~----~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~~----~~i~------------------ 122 (213)
.|++|++.++. .+..... +......+.++|++++++..... ..+.
T Consensus 201 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~ 280 (693)
T 3iuj_A 201 LSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDL 280 (693)
T ss_dssp ----CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSS
T ss_pred ccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCC
Confidence 39999987653 3333333 34457789999999987654332 1222
Q ss_pred eceEEEEEccCCce-EEEecCC---CcEEEEEccCCee--eeeecCCCCceeEEEecCCCeEEEEeCCC-CeEEE-EecC
Q psy7433 123 SPVKCLAIDPHEEF-FVTGAGD---GDIKVWSLSGNHL--LYNFPGEHARSSFFKHIGQGVTQLHVDGG-SRLFS-CGAD 194 (213)
Q Consensus 123 ~~v~~~~~~~~~~~-l~~~~~d---g~i~v~d~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s-~~~d 194 (213)
...... |++++.. ++....+ +.|..+|+.++.. ...+..+. ..+. .|+++ +.|+. ...+
T Consensus 281 ~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~----------~~~~--~~s~~g~~lv~~~~~~ 347 (693)
T 3iuj_A 281 DADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPER----------QQVL--TVHSGSGYLFAEYMVD 347 (693)
T ss_dssp SSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCC----------SSCE--EEEEETTEEEEEEEET
T ss_pred CceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCC----------CCEE--EEEEECCEEEEEEEEC
Confidence 111222 5566554 4444433 5788889876543 23333333 2233 56653 44544 4445
Q ss_pred C--cEEEEeCCCC
Q psy7433 195 G--SMKVRQLPDR 205 (213)
Q Consensus 195 ~--~i~iw~~~~~ 205 (213)
+ .|++|++..+
T Consensus 348 g~~~l~~~d~~g~ 360 (693)
T 3iuj_A 348 ATARVEQFDYEGK 360 (693)
T ss_dssp TEEEEEEECTTSC
T ss_pred CeeEEEEEECCCC
Confidence 5 6888888744
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=99.20 E-value=8.5e-10 Score=82.44 Aligned_cols=179 Identities=7% Similarity=-0.063 Sum_probs=115.1
Q ss_pred EEEEeCCCCeEEEeec-------cCCCccEEEEeCCCcccccceeeeeee-------cCCceEEEEecCCCEEEEEcC--
Q psy7433 12 DFVFLGSCSLVATAGH-------SSESKNVCLWDSLLPQKKALVQAFVCH-------DQGASSLVFAPQHQLLISAGK-- 75 (213)
Q Consensus 12 ~~~~~~~~~~l~~~g~-------~s~~~~i~iwd~~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~-- 75 (213)
.+.++|+++.++.+.. +..++.|.+||. .+.+.+..+... ......++++|+|++++.+..
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~---~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~ 145 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDP---VTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGS 145 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECT---TTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSS
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEEC---CCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCC
Confidence 7999999999888721 013688999999 677777777543 134678999999999998864
Q ss_pred CCcEEE--EeccCceEEEeccc------------------CCCCeeEEEe--------------------------cCCC
Q psy7433 76 KGDICV--IDLRQRVIRSRFNA------------------HESPVKCLAI--------------------------DPHE 109 (213)
Q Consensus 76 d~~v~i--wd~~~~~~~~~~~~------------------~~~~i~~~~~--------------------------~~~~ 109 (213)
+..+.+ +|+.+ +..+.. ..+.+..+.. .+++
T Consensus 146 ~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~ 222 (368)
T 1mda_H 146 SAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYP 222 (368)
T ss_dssp SCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTT
T ss_pred CCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccccccC
Confidence 456888 88866 122210 0000101111 2222
Q ss_pred CEEEEecCCCcee-----------------------------eceEEEEEccCCceEEEecC---------CCcEEEEEc
Q psy7433 110 EFFVTGAGDGDIK-----------------------------SPVKCLAIDPHEEFFVTGAG---------DGDIKVWSL 151 (213)
Q Consensus 110 ~~l~~~~~~~~i~-----------------------------~~v~~~~~~~~~~~l~~~~~---------dg~i~v~d~ 151 (213)
..++..+. +.+. .....+.++|+++.++++.. ++.+.++|+
T Consensus 223 ~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~ 301 (368)
T 1mda_H 223 GMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTA 301 (368)
T ss_dssp TEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEES
T ss_pred CEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEEC
Confidence 22222222 2221 00112789999987776533 235669999
Q ss_pred cCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe--EEEEe-cCCcEEEEeCCCCccc
Q psy7433 152 SGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR--LFSCG-ADGSMKVRQLPDRDAV 208 (213)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--l~s~~-~d~~i~iw~~~~~~~~ 208 (213)
.+.+.+..+... .....++++|++. +++.. .++.|.++|+.+.+.+
T Consensus 302 ~t~~vv~~i~vg-----------~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv 350 (368)
T 1mda_H 302 SVGQTSGPISNG-----------HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQ 350 (368)
T ss_dssp SSCCEEECCEEE-----------EEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEE
T ss_pred CCCeEEEEEECC-----------CCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEE
Confidence 999988888764 3588899999763 56666 5999999999987543
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.14 E-value=3.7e-09 Score=86.27 Aligned_cols=181 Identities=12% Similarity=0.080 Sum_probs=111.4
Q ss_pred EEEEEeCCCCeEEEeeccCCCc--------------cEEEEeCCCcccc-cceeeeeeecCCceEEEEecCCCEEEEEcC
Q psy7433 11 SDFVFLGSCSLVATAGHSSESK--------------NVCLWDSLLPQKK-ALVQAFVCHDQGASSLVFAPQHQLLISAGK 75 (213)
Q Consensus 11 ~~~~~~~~~~~l~~~g~~s~~~--------------~i~iwd~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 75 (213)
..++|+|| +.|+.+. .++ .|++|++..+... ..+.....+...+..+.|+|+|++|+..+.
T Consensus 212 ~~~~wspD-~~l~~~~---~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~ 287 (741)
T 1yr2_A 212 SGLAWLGN-DALLYSR---FAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSS 287 (741)
T ss_dssp CCCEESTT-SEEEEEE---CCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred ccEEEECC-CEEEEEE---ecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEE
Confidence 57899999 8888873 333 3889998432211 122111122234789999999998887764
Q ss_pred C-----CcEEEEeccCc--eEEEecccCCCCeeEEEecCCCCEEEEecCCCc----ee-------------------ece
Q psy7433 76 K-----GDICVIDLRQR--VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGD----IK-------------------SPV 125 (213)
Q Consensus 76 d-----~~v~iwd~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~----i~-------------------~~v 125 (213)
+ ..|.+||+.++ +....+..+........ +|+++.|+..+.++. +. ..+
T Consensus 288 ~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l 366 (741)
T 1yr2_A 288 EGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNL 366 (741)
T ss_dssp CTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEE
T ss_pred ccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeE
Confidence 4 38999999876 31344444444444443 477777666554321 21 224
Q ss_pred EEEEEccCCceEEEecCCCcEEEEEcc-CCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEE-EE---ecCCcEEE
Q psy7433 126 KCLAIDPHEEFFVTGAGDGDIKVWSLS-GNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLF-SC---GADGSMKV 199 (213)
Q Consensus 126 ~~~~~~~~~~~l~~~~~dg~i~v~d~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~-s~---~~d~~i~i 199 (213)
..+.|+ ++.++++...++..++|.+. +++....+..+. ...+..+.++|++ .++ +. ...+.+++
T Consensus 367 ~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~---------~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~ 436 (741)
T 1yr2_A 367 ESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPG---------IGSASGLSGRPGDRHAYLSFSSFTQPATVLA 436 (741)
T ss_dssp EEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSS---------SCEEEEEECCBTCSCEEEEEEETTEEEEEEE
T ss_pred EEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCC---------CeEEEEeecCCCCCEEEEEEcCCCCCCEEEE
Confidence 456666 45677888888887777654 455555554322 1568888998854 343 22 34578999
Q ss_pred EeCCCCc
Q psy7433 200 RQLPDRD 206 (213)
Q Consensus 200 w~~~~~~ 206 (213)
||+.+++
T Consensus 437 ~d~~tg~ 443 (741)
T 1yr2_A 437 LDPATAK 443 (741)
T ss_dssp EETTTTE
T ss_pred EECCCCc
Confidence 9998764
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=1.6e-07 Score=66.84 Aligned_cols=187 Identities=13% Similarity=-0.011 Sum_probs=122.8
Q ss_pred eEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCC-ceEEEEecCCCEEEE-EcCCCcEEEEeccCc
Q psy7433 10 TSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQG-ASSLVFAPQHQLLIS-AGKKGDICVIDLRQR 87 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~-~~~d~~v~iwd~~~~ 87 (213)
...+.|+|++.++++.|. ..++.|.+.|+ .+++.+..+...... ...+++. ++.|+. .-.++.+.++|..+.
T Consensus 23 ~~Gl~~~~dg~Lyvstg~-~~~s~v~~iD~---~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~ 96 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGL-YGRSSVRQVAL---QTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTL 96 (266)
T ss_dssp EEEEEECSTTEEEEEECS-TTTCEEEEEET---TTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTT
T ss_pred cccEEEeCCCeEEEECCC-CCCCEEEEEEC---CCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCC
Confidence 578999998877776631 13689999999 566676665432221 1234444 545554 446789999999999
Q ss_pred eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee----------------------eceEEEEEccCCceEEEecCCCc
Q psy7433 88 VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----------------------SPVKCLAIDPHEEFFVTGAGDGD 145 (213)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------------~~v~~~~~~~~~~~l~~~~~dg~ 145 (213)
+.+..++.... ....++++++.++++..++.+. ..++.+.|. +++.++....++.
T Consensus 97 ~v~~~i~~g~~--~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~ 173 (266)
T 2iwa_A 97 SNIKNFTHQMK--DGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDC 173 (266)
T ss_dssp EEEEEEECCSS--SCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSE
T ss_pred cEEEEEECCCC--CeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCe
Confidence 99888864312 2244556777777766666664 135567777 6766666656789
Q ss_pred EEEEEccCCeeeeeecCCCCcee---EEEecCCCeEEEEeCCCC-e-EEEEecCCcEEEEeCCCC
Q psy7433 146 IKVWSLSGNHLLYNFPGEHARSS---FFKHIGQGVTQLHVDGGS-R-LFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 146 i~v~d~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~~~~~~~-~-l~s~~~d~~i~iw~~~~~ 205 (213)
|.+.|..+++.+..+........ .........+.++++|++ + ++++...+.+.+.++...
T Consensus 174 V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 174 IARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred EEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 99999999998888765310000 000001357899999864 4 677778888988887654
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=99.08 E-value=4.1e-07 Score=64.93 Aligned_cols=183 Identities=11% Similarity=0.016 Sum_probs=111.9
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEE-EEcCCCcEEEEeccC
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLI-SAGKKGDICVIDLRQ 86 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~v~iwd~~~ 86 (213)
..+..++|+|++..|..+. ..++.|..++.+ .......+.........+++++++..|+ +-...+.|.++++..
T Consensus 36 ~~~~gi~~d~~~~~ly~~d--~~~~~I~~~~~~---g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g 110 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTD--ISEPSIGRASLH---GGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDG 110 (267)
T ss_dssp EEEEEEEEETTTTEEEEEE--TTTTEEEEEESS---SCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CcEEEEEEecCCCEEEEEE--CCCCEEEEEecC---CCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCC
Confidence 3467899999766555543 467899999984 2222222222224678999999765555 445567899999865
Q ss_pred ceEEEecccCCCCeeEEEecCCCCEEEEecCC---Ccee-----------------eceEEEEEccCCceE-EEecCCCc
Q psy7433 87 RVIRSRFNAHESPVKCLAIDPHEEFFVTGAGD---GDIK-----------------SPVKCLAIDPHEEFF-VTGAGDGD 145 (213)
Q Consensus 87 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~---~~i~-----------------~~v~~~~~~~~~~~l-~~~~~dg~ 145 (213)
................++++|++..+..+... +.+. .....++++|++..| ++-...+.
T Consensus 111 ~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~ 190 (267)
T 1npe_A 111 TQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHR 190 (267)
T ss_dssp CSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred CCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCE
Confidence 43222222222457899999965554444332 3332 356789999986654 45556688
Q ss_pred EEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeE-EEEecCCcEEEEeCCCCcc
Q psy7433 146 IKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRL-FSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 146 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l-~s~~~d~~i~iw~~~~~~~ 207 (213)
|.++|+........+... .....++.. ++.| ++....+.|..+|..+++.
T Consensus 191 I~~~~~~g~~~~~~~~~~-----------~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~ 241 (267)
T 1npe_A 191 AECLNPAQPGRRKVLEGL-----------QYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKE 241 (267)
T ss_dssp EEEEETTEEEEEEEEECC-----------CSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEE
T ss_pred EEEEecCCCceEEEecCC-----------CCceEEEEe-CCEEEEEECCCCeEEEEeCCCCCc
Confidence 999998654433333221 234566665 4454 4444568999999887643
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=99.06 E-value=3.4e-08 Score=73.99 Aligned_cols=155 Identities=10% Similarity=0.027 Sum_probs=99.8
Q ss_pred EEEeCCCCeEEEeecc--CCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEc----------CCCcEE
Q psy7433 13 FVFLGSCSLVATAGHS--SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG----------KKGDIC 80 (213)
Q Consensus 13 ~~~~~~~~~l~~~g~~--s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~v~ 80 (213)
....|+++.+...... ..++.|.+.|. .+.+.+..+.....+ . ++++|++++++.++ .++.|.
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~---~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~Vs 112 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDG---EAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVE 112 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEET---TTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEE
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEEC---CCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEE
Confidence 3456888888777310 01679999998 677777777755454 4 99999999888775 357899
Q ss_pred EEeccCceEEEecccCC-CCeeEEEecCCCCEEEEecCCCceeeceEEEEEccCCceEEEecC--CCcEEEEEccCCeee
Q psy7433 81 VIDLRQRVIRSRFNAHE-SPVKCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPHEEFFVTGAG--DGDIKVWSLSGNHLL 157 (213)
Q Consensus 81 iwd~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~~~~l~~~~~--dg~i~v~d~~~~~~~ 157 (213)
+||..+.+.+..+.-.. .... .-.....+.|+|||+++++++. ++.|.++|+.+.+.+
T Consensus 113 viD~~t~~v~~~I~v~~g~r~~-------------------~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv 173 (386)
T 3sjl_D 113 VFDPVTLLPTADIELPDAPRFL-------------------VGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFK 173 (386)
T ss_dssp EECTTTCCEEEEEEETTCCCCC-------------------BSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEE
T ss_pred EEECCCCeEEEEEECCCccccc-------------------cCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEE
Confidence 99999998877764221 0000 0011234556666676666653 578999999999888
Q ss_pred eeecCCCCceeEEEecCCCeEEEEeCC-CCeEEEEecCCcEEEEeCCC
Q psy7433 158 YNFPGEHARSSFFKHIGQGVTQLHVDG-GSRLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~s~~~d~~i~iw~~~~ 204 (213)
.++.... ...+ +.. ...+++.+.||++.+.++.+
T Consensus 174 ~tI~v~g------------~~~~-~P~g~~~~~~~~~DG~~~~v~~~~ 208 (386)
T 3sjl_D 174 RMLDVPD------------CYHI-FPTAPDTFFMHCRDGSLAKVAFGT 208 (386)
T ss_dssp EEEECCS------------EEEE-EEEETTEEEEEETTSCEEEEECCS
T ss_pred EEEECCC------------ccee-ecCCCceeEEECCCCCEEEEECCC
Confidence 8886532 1111 111 23455666677777777655
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=99.03 E-value=1.7e-07 Score=69.05 Aligned_cols=162 Identities=12% Similarity=0.100 Sum_probs=102.2
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeee-----cCCceEEEEecCCCEEEEEcC------
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCH-----DQGASSLVFAPQHQLLISAGK------ 75 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~------ 75 (213)
...+.++.++|+|+++++. .+ .|.+||.+ .++. ..+... ...+..++++|+|+++++...
T Consensus 89 ~~~v~~i~~~~dg~l~v~~----~~-gl~~~d~~---~g~~-~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~ 159 (326)
T 2ghs_A 89 PFMGSALAKISDSKQLIAS----DD-GLFLRDTA---TGVL-TLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETG 159 (326)
T ss_dssp SSCEEEEEEEETTEEEEEE----TT-EEEEEETT---TCCE-EEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTT
T ss_pred CCcceEEEEeCCCeEEEEE----CC-CEEEEECC---CCcE-EEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCC
Confidence 3568899999999988876 33 49999973 2222 222111 134788999999987665432
Q ss_pred CCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEec-CCCcee-------------------------eceEEEE
Q psy7433 76 KGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGA-GDGDIK-------------------------SPVKCLA 129 (213)
Q Consensus 76 d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~~~~i~-------------------------~~v~~~~ 129 (213)
.+.|..++ +++... +.........++|+|+++.++.+. .++.+. ..+..++
T Consensus 160 ~~~l~~~~--~g~~~~-~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~ 236 (326)
T 2ghs_A 160 AGSIYHVA--KGKVTK-LFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSV 236 (326)
T ss_dssp CEEEEEEE--TTEEEE-EEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEE
T ss_pred ceEEEEEe--CCcEEE-eeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeE
Confidence 24455555 454332 222233567899999998654442 222221 1245678
Q ss_pred EccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeC-CC-CeEEEE
Q psy7433 130 IDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVD-GG-SRLFSC 191 (213)
Q Consensus 130 ~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~-~~l~s~ 191 (213)
++++|.+.++...++.|.+||. +++.+..+..+. ..+++++|. ++ +.|+.+
T Consensus 237 ~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~----------~~~~~~af~g~d~~~L~vt 289 (326)
T 2ghs_A 237 CDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPG----------KQTTCPAFIGPDASRLLVT 289 (326)
T ss_dssp ECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSC----------SBEEEEEEESTTSCEEEEE
T ss_pred ECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCC----------CCcEEEEEecCCCCEEEEE
Confidence 8888887776666788999998 566666665543 468999997 65 445433
|
| >3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=98.99 E-value=3.3e-08 Score=72.56 Aligned_cols=173 Identities=13% Similarity=0.111 Sum_probs=112.2
Q ss_pred ceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCce
Q psy7433 9 ITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRV 88 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~ 88 (213)
.+.++...+++.+++. +.++.|..+|. . ++.+..+......+.++...+++.+++ ++ +.|..+| .+++
T Consensus 138 ~~~~~~~~~~g~l~vg----t~~~~l~~~d~---~-g~~~~~~~~~~~~~~~~~~d~~g~l~v-~t--~~l~~~d-~~g~ 205 (330)
T 3hxj_A 138 IYATPIVSEDGTIYVG----SNDNYLYAINP---D-GTEKWRFKTNDAITSAASIGKDGTIYF-GS--DKVYAIN-PDGT 205 (330)
T ss_dssp CCSCCEECTTSCEEEE----CTTSEEEEECT---T-SCEEEEEECSSCCCSCCEECTTCCEEE-ES--SSEEEEC-TTSC
T ss_pred eeeeeEEcCCCEEEEE----cCCCEEEEECC---C-CCEeEEEecCCCceeeeEEcCCCEEEE-Ee--CEEEEEC-CCCc
Confidence 3455566667775554 36789999997 3 445545544455677777777776544 44 7899999 7777
Q ss_pred EEEecccCCCCeeEEEecCCCCEEEEecCCCcee----------------eceEEEEEccCCceEEEecCCCcEEEEEcc
Q psy7433 89 IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLS 152 (213)
Q Consensus 89 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~ 152 (213)
....+......+.++...+++...+ ++.++.+. ..+..+.+.+++ .|..++.+|.|..+|.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~g~l~v-~t~~~gl~~~~~~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~- 282 (330)
T 3hxj_A 206 EKWNFYAGYWTVTRPAISEDGTIYV-TSLDGHLYAINPDGTEKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAINP- 282 (330)
T ss_dssp EEEEECCSSCCCSCCEECTTSCEEE-EETTTEEEEECTTSCEEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEECT-
T ss_pred EEEEEccCCcceeceEECCCCeEEE-EcCCCeEEEECCCCCEeEEeeCCCCccccceEcCCC-eEEEecCCCCEEEECC-
Confidence 6666655556678888888775444 44443332 122334454455 4667777888999995
Q ss_pred CCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCc
Q psy7433 153 GNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~ 206 (213)
+++....+.... ..+.++...+++.|..++.+|.+++......+
T Consensus 283 ~g~~~~~~~~~~----------~~~~~~~~d~~g~l~~gt~~G~~~~~~~~~~~ 326 (330)
T 3hxj_A 283 DGTEKWNFETGS----------WIIATPVIDENGTIYFGTRNGKFYALFNLEHH 326 (330)
T ss_dssp TSCEEEEEECSS----------CCCSCCEECTTCCEEEECTTSCEEEEEC----
T ss_pred CCcEEEEEEcCC----------ccccceEEcCCCEEEEEcCCCeEEEEeccccc
Confidence 666665554432 45666777778889999999999998876543
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=98.95 E-value=7.1e-08 Score=71.57 Aligned_cols=189 Identities=10% Similarity=0.050 Sum_probs=110.8
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeee-------eeecCCceEEEEecCCCEEEEEcC-----
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAF-------VCHDQGASSLVFAPQHQLLISAGK----- 75 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~----- 75 (213)
..+..++++|+|+++++... ..++.++||.+. .++ +..+ ..+...+..++++++++++++-..
T Consensus 17 ~~p~~va~~~~g~~~v~~~~-~~~~~~~l~~~~---~g~-~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~ 91 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQ-FYQPEMQVAELT---QDG-LIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKS 91 (343)
T ss_dssp SCEEEEEECTTSCEEEEECG-GGCCSCSEEEEE---TTE-EEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTS
T ss_pred CCcceEEECCCCCEEEEeCC-CCCCceEEEEEC---CCC-eecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCC
Confidence 57889999999999998621 122336666653 121 2211 123457899999999876655433
Q ss_pred CCcEEEEeccCceEEEecccC------CCCeeEEEecCCCCEE-EEec---CCCcee-----------------------
Q psy7433 76 KGDICVIDLRQRVIRSRFNAH------ESPVKCLAIDPHEEFF-VTGA---GDGDIK----------------------- 122 (213)
Q Consensus 76 d~~v~iwd~~~~~~~~~~~~~------~~~i~~~~~~~~~~~l-~~~~---~~~~i~----------------------- 122 (213)
+..|.+||+.+++.+..+... ...+..++++|++..+ ++.. .++.+.
T Consensus 92 ~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~ 171 (343)
T 2qe8_A 92 VPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPED 171 (343)
T ss_dssp CCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCS
T ss_pred CCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccc
Confidence 578999999998866655421 2346789999764443 4433 222221
Q ss_pred -----------------------eceEEEEEccCCceEEEecCCC-cEEEEEccC---Ceee-eeecCCCCceeEEEecC
Q psy7433 123 -----------------------SPVKCLAIDPHEEFFVTGAGDG-DIKVWSLSG---NHLL-YNFPGEHARSSFFKHIG 174 (213)
Q Consensus 123 -----------------------~~v~~~~~~~~~~~l~~~~~dg-~i~v~d~~~---~~~~-~~~~~~~~~~~~~~~~~ 174 (213)
..+..++|+|+++.|+.+..++ .+..++... +... ..+... .. .....
T Consensus 172 ~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~---~~-~~g~~ 247 (343)
T 2qe8_A 172 IDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSK---IE-RYSEK 247 (343)
T ss_dssp CCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTT---CE-EEEEC
T ss_pred cceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcc---eE-ecccC
Confidence 1257799999998777776655 555555321 1000 000000 00 00011
Q ss_pred CCeEEEEeCCCCe-EEEEecCCcEEEEeCCCC
Q psy7433 175 QGVTQLHVDGGSR-LFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 175 ~~v~~~~~~~~~~-l~s~~~d~~i~iw~~~~~ 205 (213)
.....+++++++. +++...++.|.+||..++
T Consensus 248 g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G 279 (343)
T 2qe8_A 248 PICDGISIDKDHNIYVGDLAHSAIGVITSADR 279 (343)
T ss_dssp CSCSCEEECTTCCEEEEEGGGTEEEEEETTTT
T ss_pred CCCceEEECCCCCEEEEccCCCeEEEEECCCC
Confidence 3456688888765 556667789999998433
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=98.94 E-value=1.7e-07 Score=73.49 Aligned_cols=171 Identities=9% Similarity=0.057 Sum_probs=123.8
Q ss_pred CCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeee-cCCceEEEE-e-cCCCEEEEEc------------------C
Q psy7433 17 GSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCH-DQGASSLVF-A-PQHQLLISAG------------------K 75 (213)
Q Consensus 17 ~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~-~~~v~~~~~-~-~~~~~l~~~~------------------~ 75 (213)
+||+++.... ..++.|.+.|+ ...++.+.+.-. ......+++ + |+++++++++ .
T Consensus 99 ~DG~~lfVnd--~~~~rVavIdl---~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~ 173 (595)
T 1fwx_A 99 YDGRFLFMND--KANTRVARVRC---DVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANY 173 (595)
T ss_dssp EEEEEEEEEE--TTTTEEEEEET---TTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGE
T ss_pred cCCCEEEEEc--CCCCEEEEEEC---CCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCccccccccc
Confidence 3888877774 46778999999 555655544322 245778888 4 8999998884 3
Q ss_pred CCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCce---------------e------------------
Q psy7433 76 KGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI---------------K------------------ 122 (213)
Q Consensus 76 d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i---------------~------------------ 122 (213)
++.+.+.|..+.+...++.-.. ....++++|+++++++.+.+..- .
T Consensus 174 ~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~ 252 (595)
T 1fwx_A 174 VNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQE 252 (595)
T ss_dssp EEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEE
T ss_pred CceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeE
Confidence 4679999999998888876433 45788899999999888866411 0
Q ss_pred ------------------------eceEEEEEccCCceEEEec-CCCcEEEEEccCCe------------eeeeecCCCC
Q psy7433 123 ------------------------SPVKCLAIDPHEEFFVTGA-GDGDIKVWSLSGNH------------LLYNFPGEHA 165 (213)
Q Consensus 123 ------------------------~~v~~~~~~~~~~~l~~~~-~dg~i~v~d~~~~~------------~~~~~~~~~~ 165 (213)
....++.++|||+++++++ .+.+|.++|+.+.+ .......
T Consensus 253 i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v--- 329 (595)
T 1fwx_A 253 LNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL--- 329 (595)
T ss_dssp ETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC---
T ss_pred ECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCC---
Confidence 2346689999999766554 67899999998653 1222222
Q ss_pred ceeEEEecCCCeEEEEeCCCCeE-EEEecCCcEEEEeCCC
Q psy7433 166 RSSFFKHIGQGVTQLHVDGGSRL-FSCGADGSMKVRQLPD 204 (213)
Q Consensus 166 ~~~~~~~~~~~v~~~~~~~~~~l-~s~~~d~~i~iw~~~~ 204 (213)
+.....++|+|++.+ ++.-.|+.|.+||+..
T Consensus 330 --------G~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 330 --------GLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp --------CSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred --------CCCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 357899999998764 4556799999999876
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=98.93 E-value=2.9e-07 Score=69.12 Aligned_cols=150 Identities=9% Similarity=-0.044 Sum_probs=97.3
Q ss_pred EeCCCCeEEEeeccC-CCc---cEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEc----------CCCcEE
Q psy7433 15 FLGSCSLVATAGHSS-ESK---NVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG----------KKGDIC 80 (213)
Q Consensus 15 ~~~~~~~l~~~g~~s-~~~---~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~v~ 80 (213)
..|+++++.... . ... .|.++|. .+.+.+..+.....+ .++++|++++++.+. .++.|.
T Consensus 28 ~~~~~~~~yv~~--~~~~~~~~~v~v~D~---~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~ 100 (373)
T 2mad_H 28 PGADGRRSYINL--PAHHSAIIQQWVLDA---GSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVE 100 (373)
T ss_pred CCCCCCEEEEeC--CcccCCccEEEEEEC---CCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEE
Confidence 346788777761 1 122 8899998 456666666543333 999999999999885 367899
Q ss_pred EEeccCceEEEecccCC-CCeeEEEecCCCCEEEEecCCCceeeceEEEEEccCCceEEEecC--CCcEEEEEccCCeee
Q psy7433 81 VIDLRQRVIRSRFNAHE-SPVKCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPHEEFFVTGAG--DGDIKVWSLSGNHLL 157 (213)
Q Consensus 81 iwd~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~~~~l~~~~~--dg~i~v~d~~~~~~~ 157 (213)
+||..+.+.+..+.... ... ..+ .....+.|+|||++|++++. ++.|.++| .+++.+
T Consensus 101 viD~~t~~~~~~i~~~~~~~~------------~~g-------~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~ 160 (373)
T 2mad_H 101 VFDPVTFLPIADIELPDAPRF------------DVG-------PYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSD 160 (373)
T ss_pred EEECCCCcEEEEEECCCcccc------------ccC-------CCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEE
Confidence 99999887776654220 000 000 11235678888888887764 47899999 998887
Q ss_pred ee-ecCCCCceeEEEecCCCeEEEEeCC--CCeEEEEecCCcEEEEeCCCCc
Q psy7433 158 YN-FPGEHARSSFFKHIGQGVTQLHVDG--GSRLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 158 ~~-~~~~~~~~~~~~~~~~~v~~~~~~~--~~~l~s~~~d~~i~iw~~~~~~ 206 (213)
.. +.... . +.+.| ...+++.+.||.+.+++. +++
T Consensus 161 ~~~i~~~~-----------~---~~~~~~~~~~~~~~~~dg~~~~vd~-~g~ 197 (373)
T 2mad_H 161 DQLLSSPT-----------C---YHIHPGAPSTFYLLCAQGGLAKTDH-AGG 197 (373)
T ss_pred eEEcCCCc-----------e---EEEEeCCCceEEEEcCCCCEEEEEC-CCc
Confidence 77 65421 1 22333 234666777888888887 543
|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.93 E-value=3.3e-06 Score=59.73 Aligned_cols=192 Identities=10% Similarity=0.118 Sum_probs=124.9
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeee-ecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVC-HDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
+.+-.+.+..++++|++..|.+.. ..++.|...|. . ++.++.+.- -......+++.+++.++++.-.++.+.+
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~--d~~~~I~~ld~---~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~ 95 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTI--NKPAAIVEMTT---N-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYV 95 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEE--ETTEEEEEEET---T-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEE
T ss_pred CCCcccCcceeEEeCCCCEEEEEE--CCCCeEEEEeC---C-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEE
Confidence 344456799999999876555543 46888888887 3 556666542 1246778899988877777667788999
Q ss_pred EeccCce---EEEecc------cCCCCeeEEEecCCCCEEEEecCCCce--e-------------------------ece
Q psy7433 82 IDLRQRV---IRSRFN------AHESPVKCLAIDPHEEFFVTGAGDGDI--K-------------------------SPV 125 (213)
Q Consensus 82 wd~~~~~---~~~~~~------~~~~~i~~~~~~~~~~~l~~~~~~~~i--~-------------------------~~v 125 (213)
+++.... .+.... ........++++|+++.|.++.+.... . ..+
T Consensus 96 ~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~ 175 (255)
T 3qqz_A 96 ISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDV 175 (255)
T ss_dssp EEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCC
T ss_pred EEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCc
Confidence 9876543 122221 123346899999998777766654331 1 356
Q ss_pred EEEEEccC-CceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeC
Q psy7433 126 KCLAIDPH-EEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQL 202 (213)
Q Consensus 126 ~~~~~~~~-~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~ 202 (213)
..++++|. +++++.......+.++|.+ ++.+..+........ ....-.....|++.+++.|+..+..+.++.+.-
T Consensus 176 S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~-l~~~~~qpEGia~d~~G~lyIvsE~n~~y~f~~ 251 (255)
T 3qqz_A 176 SGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRG-LSHNIKQAEGVAMDASGNIYIVSEPNRFYRFTP 251 (255)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGG-CSSCCCSEEEEEECTTCCEEEEETTTEEEEEEC
T ss_pred eeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCC-cccccCCCCeeEECCCCCEEEEcCCceEEEEEe
Confidence 78899986 4567777777889999965 445544443211000 000013678999999888888888887766653
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=98.92 E-value=6.4e-07 Score=63.20 Aligned_cols=174 Identities=13% Similarity=0.079 Sum_probs=111.0
Q ss_pred eEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEc-CCCcEEEEeccCce
Q psy7433 10 TSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG-KKGDICVIDLRQRV 88 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~iwd~~~~~ 88 (213)
...+.|+ ++.++.++|. .....|+++|+ .+++.+..+... .........+.++.|+... .++.+.+||..+.+
T Consensus 45 tqGL~~~-~~~LyestG~-~g~S~v~~vD~---~Tgkv~~~~~l~-~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~ 118 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGL-NGRSSIRKVDI---ESGKTLQQIELG-KRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLR 118 (262)
T ss_dssp EEEEEEE-TTEEEEEEEE-TTEEEEEEECT---TTCCEEEEEECC-TTCCEEEEEEETTEEEEEESSSSEEEEEETTTCC
T ss_pred cceEEEE-CCEEEEECCC-CCCceEEEEEC---CCCcEEEEEecC-CccceeEEEEeCCEEEEEEeeCCEEEEEECccCc
Confidence 4778888 6777777742 11348999999 567777666543 3333333344455555544 57899999999999
Q ss_pred EEEecccCCCCeeEEEecCCCCEEEEecCCCcee----------------------eceEEEEEccCCceEEEecCCCcE
Q psy7433 89 IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----------------------SPVKCLAIDPHEEFFVTGAGDGDI 146 (213)
Q Consensus 89 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------------~~v~~~~~~~~~~~l~~~~~dg~i 146 (213)
.+.+++... .-..++ +++..|+.+..++.+. ..++.+.|. +|+..+..-.++.|
T Consensus 119 ~~~ti~~~~-eG~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I 194 (262)
T 3nol_A 119 QVRSFNYDG-EGWGLT--HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKI 194 (262)
T ss_dssp EEEEEECSS-CCCCEE--ECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEE
T ss_pred EEEEEECCC-CceEEe--cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeE
Confidence 998887432 223444 5677777666555554 123346676 67766666568899
Q ss_pred EEEEccCCeeeeeecCCCCceeE--EEecCCCeEEEEeCCC-CeEEEEec
Q psy7433 147 KVWSLSGNHLLYNFPGEHARSSF--FKHIGQGVTQLHVDGG-SRLFSCGA 193 (213)
Q Consensus 147 ~v~d~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~-~~l~s~~~ 193 (213)
.+.|.++++.+..+......... ........+.++++|+ ++|+..+.
T Consensus 195 ~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 195 VRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred EEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 99999999998888764211100 0112356799999985 45555544
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=98.91 E-value=3.3e-07 Score=69.58 Aligned_cols=179 Identities=13% Similarity=0.077 Sum_probs=113.3
Q ss_pred eEEEEEeCCCCeEEEeec---cCCCccEEEEeCCCcccccceeeeeeecC---CceEEEEecCCCEEEEEc---------
Q psy7433 10 TSDFVFLGSCSLVATAGH---SSESKNVCLWDSLLPQKKALVQAFVCHDQ---GASSLVFAPQHQLLISAG--------- 74 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~---~s~~~~i~iwd~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~--------- 74 (213)
...+...|+| +++++.. +...+.|.+.|. .+.+.+..+..... --..+.|+|+++.+++..
T Consensus 140 Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~---~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~ 215 (462)
T 2ece_A 140 LHTVHCGPDA-IYISALGNEEGEGPGGILMLDH---YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIED 215 (462)
T ss_dssp EEEEEECSSC-EEEEEEEETTSCSCCEEEEECT---TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTT
T ss_pred ccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC---CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCcccccc
Confidence 3456778999 6665521 001268999998 56677777652222 134588899999988884
Q ss_pred ----------CCCcEEEEeccCceEEEecccCC--CCeeEEEe--cCCCCEEEEecC------CCcee------------
Q psy7433 75 ----------KKGDICVIDLRQRVIRSRFNAHE--SPVKCLAI--DPHEEFFVTGAG------DGDIK------------ 122 (213)
Q Consensus 75 ----------~d~~v~iwd~~~~~~~~~~~~~~--~~i~~~~~--~~~~~~l~~~~~------~~~i~------------ 122 (213)
.+..|.+||+.+++.+..+.... .....+.| +|+++++.++++ ++++.
T Consensus 216 g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~ 295 (462)
T 2ece_A 216 GLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAE 295 (462)
T ss_dssp CCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEE
T ss_pred ccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEE
Confidence 36899999999988888776431 23455655 999988777665 22221
Q ss_pred -------------------------eceEEEEEccCCceEEEecC-CCcEEEEEcc---CCeeeeeecCCCCc-eeEE--
Q psy7433 123 -------------------------SPVKCLAIDPHEEFFVTGAG-DGDIKVWSLS---GNHLLYNFPGEHAR-SSFF-- 170 (213)
Q Consensus 123 -------------------------~~v~~~~~~~~~~~l~~~~~-dg~i~v~d~~---~~~~~~~~~~~~~~-~~~~-- 170 (213)
..+..+.++|||++|.++.. .+.|.+||+. +.+.+..+...... ....
T Consensus 296 ~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~ 375 (462)
T 2ece_A 296 KVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPA 375 (462)
T ss_dssp EEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTT
T ss_pred EEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccc
Confidence 22577889999998877765 5799999985 23445444432100 0000
Q ss_pred -EecCCCeEEEEeCCCC-eEEEEe
Q psy7433 171 -KHIGQGVTQLHVDGGS-RLFSCG 192 (213)
Q Consensus 171 -~~~~~~v~~~~~~~~~-~l~s~~ 192 (213)
....+....+.++|++ +|+++.
T Consensus 376 G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 376 GHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp SCCCCSCCCCEEECTTSSEEEEEC
T ss_pred cccCCCCCCEEEEcCCCCEEEEEc
Confidence 0000135778899876 466655
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=98.85 E-value=1.9e-07 Score=75.67 Aligned_cols=179 Identities=11% Similarity=0.064 Sum_probs=103.7
Q ss_pred EEEEEeCCCCeEEEeeccCCC-------------ccEEEEeCCCcccc-cceeeeee-ecCCceEEEEecCCCEEEEEc-
Q psy7433 11 SDFVFLGSCSLVATAGHSSES-------------KNVCLWDSLLPQKK-ALVQAFVC-HDQGASSLVFAPQHQLLISAG- 74 (213)
Q Consensus 11 ~~~~~~~~~~~l~~~g~~s~~-------------~~i~iwd~~~~~~~-~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~- 74 (213)
..++|+ |++.|+.+ +.+ ..|++|++.++... ..+..... +......+.|+|+|++|+...
T Consensus 178 ~~~~Ws-Dg~~l~y~---~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~ 253 (693)
T 3iuj_A 178 SGISWL-GNEGFFYS---SYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAA 253 (693)
T ss_dssp CCCEEE-TTTEEEEE---ESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEE
T ss_pred ccEEEe-CCCEEEEE---EecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEc
Confidence 567899 99988887 344 34999998432211 12222222 334567899999999876433
Q ss_pred ---CCCcEEEEeccCce-EEEecccCCCCeeEEEecCCCCEEEEecC-C---Ccee-------------------eceEE
Q psy7433 75 ---KKGDICVIDLRQRV-IRSRFNAHESPVKCLAIDPHEEFFVTGAG-D---GDIK-------------------SPVKC 127 (213)
Q Consensus 75 ---~d~~v~iwd~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-~---~~i~-------------------~~v~~ 127 (213)
.+..|.++|+.++. ....+..+....... +++++..|+..+. + ..+. ..+.
T Consensus 254 ~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~- 331 (693)
T 3iuj_A 254 NSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL- 331 (693)
T ss_dssp SSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE-
T ss_pred cCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE-
Confidence 23589999997762 233444444444333 5555554443332 2 1221 1222
Q ss_pred EEEccCCceEEEecCC-C--cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecC----CcEEE
Q psy7433 128 LAIDPHEEFFVTGAGD-G--DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGAD----GSMKV 199 (213)
Q Consensus 128 ~~~~~~~~~l~~~~~d-g--~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d----~~i~i 199 (213)
.|+++++.|+....+ + .|++||+..+. ...+..... ..+..+.+++++ .++....+ +.+..
T Consensus 332 -~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~-~~~l~~p~~---------~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~ 400 (693)
T 3iuj_A 332 -TVHSGSGYLFAEYMVDATARVEQFDYEGKR-VREVALPGL---------GSVSGFNGKHDDPALYFGFENYAQPPTLYR 400 (693)
T ss_dssp -EEEEETTEEEEEEEETTEEEEEEECTTSCE-EEEECCSSS---------SEEEECCCCTTCSCEEEEEECSSSCCEEEE
T ss_pred -EEEEECCEEEEEEEECCeeEEEEEECCCCe-eEEeecCCC---------ceEEeeecCCCCCEEEEEecCCCCCCEEEE
Confidence 788888877666544 3 68888887443 334432221 456667777643 34333332 78999
Q ss_pred EeCCCCc
Q psy7433 200 RQLPDRD 206 (213)
Q Consensus 200 w~~~~~~ 206 (213)
||+.+++
T Consensus 401 ~d~~~g~ 407 (693)
T 3iuj_A 401 FEPKSGA 407 (693)
T ss_dssp ECTTTCC
T ss_pred EECCCCe
Confidence 9987654
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=98.84 E-value=3.4e-06 Score=59.61 Aligned_cols=170 Identities=10% Similarity=0.013 Sum_probs=108.5
Q ss_pred eEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEE-EEcCCCcEEEEeccCce
Q psy7433 10 TSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLI-SAGKKGDICVIDLRQRV 88 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~v~iwd~~~~~ 88 (213)
...+.|+ ++.++.+. ..++.|+++|+ .+++.+..+ . ..........+.++.|+ ..-.++.+.+||..+.+
T Consensus 57 tqGL~~~-~~~Ly~st---G~~g~v~~iD~---~Tgkv~~~~-l-~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~ 127 (268)
T 3nok_A 57 TQGLVFH-QGHFFEST---GHQGTLRQLSL---ESAQPVWME-R-LGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQ 127 (268)
T ss_dssp EEEEEEE-TTEEEEEE---TTTTEEEECCS---SCSSCSEEE-E-CTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTE
T ss_pred cceEEEE-CCEEEEEc---CCCCEEEEEEC---CCCcEEeEE-C-CCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCc
Confidence 4678887 35666666 47888999999 566666665 2 23333322333444444 44468899999999999
Q ss_pred EEEecccCCCCeeEEEecCCCCEEEEecCCCcee----------------------eceEEEEEccCCceEEEecCCCcE
Q psy7433 89 IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----------------------SPVKCLAIDPHEEFFVTGAGDGDI 146 (213)
Q Consensus 89 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------------~~v~~~~~~~~~~~l~~~~~dg~i 146 (213)
.+.+++.. ..-+.++ ++++.|+.+..++.+. ..++.+.|. +|+..+..-.++.|
T Consensus 128 ~~~ti~~~-~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I 203 (268)
T 3nok_A 128 RERTTRYS-GEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDV 203 (268)
T ss_dssp EEEEEECS-SCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEE
T ss_pred EEEEEeCC-CceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeE
Confidence 99988753 3334454 5577777776666554 234556666 67766666567899
Q ss_pred EEEEccCCeeeeeecCCCCceeE---EEecCCCeEEEEeCCC-CeEEEEe
Q psy7433 147 KVWSLSGNHLLYNFPGEHARSSF---FKHIGQGVTQLHVDGG-SRLFSCG 192 (213)
Q Consensus 147 ~v~d~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~~-~~l~s~~ 192 (213)
.+.|.++++.+..+......... ........+.|+++|+ ++|+..+
T Consensus 204 ~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 204 LEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred EEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 99999999988877653110000 0111257899999984 4554444
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=98.79 E-value=1.1e-06 Score=66.82 Aligned_cols=121 Identities=10% Similarity=-0.035 Sum_probs=82.9
Q ss_pred CCCCeEEEeeccCCC----ccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEc----------CCCcEEEE
Q psy7433 17 GSCSLVATAGHSSES----KNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG----------KKGDICVI 82 (213)
Q Consensus 17 ~~~~~l~~~g~~s~~----~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~v~iw 82 (213)
|+++.++... ..+ +.|.++|. .+.+.+..+..-..+ .++++|++++++.+. .++.|.++
T Consensus 82 ~~~~~vyV~n--~~~~~~~~~VsVID~---~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~Vsvi 154 (426)
T 3c75_H 82 PDARRVYIQD--PAHFAAITQQFVIDG---STGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVF 154 (426)
T ss_dssp CCTTEEEEEE--CTTTCSSEEEEEEET---TTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCCCEEEEEC--CCcCCCCCeEEEEEC---CCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEE
Confidence 3666555552 222 79999998 677788887755555 899999999888876 36789999
Q ss_pred eccCceEEEecccC-CCCeeEEEecCCCCEEEEecCCCceeeceEEEEEccCCceEEEecC--CCcEEEEEccCCeeeee
Q psy7433 83 DLRQRVIRSRFNAH-ESPVKCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPHEEFFVTGAG--DGDIKVWSLSGNHLLYN 159 (213)
Q Consensus 83 d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~~~~l~~~~~--dg~i~v~d~~~~~~~~~ 159 (213)
|..+++.+..+.-. ...... -.....+.|+|||+++++++. ++.|.+.|+.+.+.+..
T Consensus 155 D~~t~~vv~~I~v~g~~r~~~-------------------g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~ 215 (426)
T 3c75_H 155 DPVTFLPIADIELPDAPRFLV-------------------GTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRM 215 (426)
T ss_dssp CTTTCCEEEEEEETTCCCCCB-------------------SCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEE
T ss_pred ECCCCcEEEEEECCCcccccc-------------------CCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEE
Confidence 99999887776421 000000 001233556666676666653 57899999999998888
Q ss_pred ecCC
Q psy7433 160 FPGE 163 (213)
Q Consensus 160 ~~~~ 163 (213)
+...
T Consensus 216 I~v~ 219 (426)
T 3c75_H 216 LDVP 219 (426)
T ss_dssp EECC
T ss_pred EEcC
Confidence 8763
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=98.78 E-value=1.7e-06 Score=65.76 Aligned_cols=185 Identities=14% Similarity=0.134 Sum_probs=114.4
Q ss_pred CCCCeEEEeeccCCCccEEEEeCC-Ccccccceeeee-------eecCCceEEEEecCCCEEEEEcCC------CcEEEE
Q psy7433 17 GSCSLVATAGHSSESKNVCLWDSL-LPQKKALVQAFV-------CHDQGASSLVFAPQHQLLISAGKK------GDICVI 82 (213)
Q Consensus 17 ~~~~~l~~~g~~s~~~~i~iwd~~-~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~d------~~v~iw 82 (213)
+++++|+..| -.++.|.++|+. .+...+..+.+. .....-..+...|+| +++++..+ +.|.++
T Consensus 93 ~~r~~l~v~~--l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vl 169 (462)
T 2ece_A 93 IERRFLIVPG--LRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILML 169 (462)
T ss_dssp CCSCEEEEEB--TTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEE
T ss_pred ccCCEEEEcc--CCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEE
Confidence 7788888776 578999999984 223334444442 011134567788999 77766554 789999
Q ss_pred eccCceEEEecccCCC---CeeEEEecCCCCEEEEecC-------------------CCcee------------------
Q psy7433 83 DLRQRVIRSRFNAHES---PVKCLAIDPHEEFFVTGAG-------------------DGDIK------------------ 122 (213)
Q Consensus 83 d~~~~~~~~~~~~~~~---~i~~~~~~~~~~~l~~~~~-------------------~~~i~------------------ 122 (213)
|.++++.+..+..... .-..+.|+|+++.+++... ...+.
T Consensus 170 D~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~ 249 (462)
T 2ece_A 170 DHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEE 249 (462)
T ss_dssp CTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTT
T ss_pred ECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCC
Confidence 9999999988863322 2346888999998888751 22222
Q ss_pred -eceEEEEE--ccCCceEEEecC------CCcEEEEEccCCee--eeeecCCCCce-eE-------EEecCCCeEEEEeC
Q psy7433 123 -SPVKCLAI--DPHEEFFVTGAG------DGDIKVWSLSGNHL--LYNFPGEHARS-SF-------FKHIGQGVTQLHVD 183 (213)
Q Consensus 123 -~~v~~~~~--~~~~~~l~~~~~------dg~i~v~d~~~~~~--~~~~~~~~~~~-~~-------~~~~~~~v~~~~~~ 183 (213)
.....+.| +|+++++.++++ ++.|.+|....++. ...+....... .. +...+.....+.++
T Consensus 250 g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS 329 (462)
T 2ece_A 250 NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDIS 329 (462)
T ss_dssp EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEEC
T ss_pred CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEEC
Confidence 12344545 999998777764 56888777654321 11111000000 00 00002457788999
Q ss_pred CCCe-E-EEEecCCcEEEEeCCC
Q psy7433 184 GGSR-L-FSCGADGSMKVRQLPD 204 (213)
Q Consensus 184 ~~~~-l-~s~~~d~~i~iw~~~~ 204 (213)
++++ | ++.-..+.|.+||+..
T Consensus 330 ~DGrfLYVSnrg~d~VavfdV~d 352 (462)
T 2ece_A 330 LDDKFLYLSLWGIGEVRQYDISN 352 (462)
T ss_dssp TTSCEEEEEETTTTEEEEEECSS
T ss_pred CCCCEEEEEeCCCCEEEEEEecC
Confidence 9775 3 4445678999999963
|
| >3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=98.76 E-value=1e-06 Score=64.55 Aligned_cols=160 Identities=9% Similarity=0.094 Sum_probs=102.9
Q ss_pred CeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCCCC
Q psy7433 20 SLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESP 99 (213)
Q Consensus 20 ~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~ 99 (213)
..+..+ +.++.|..+|. . ++...........+.++...+++. ++.++.++.|..+|.. ++....+......
T Consensus 108 ~~l~v~---t~~~~l~~~d~---~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~ 178 (330)
T 3hxj_A 108 DILYVT---SMDGHLYAINT---D-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAI 178 (330)
T ss_dssp TEEEEE---CTTSEEEEECT---T-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCC
T ss_pred CEEEEE---ecCCEEEEEcC---C-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCc
Confidence 344444 46888999997 3 444444444445566677776776 6667778999999998 7766666555556
Q ss_pred eeEEEecCCCCEEEEecCCCcee---------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCC
Q psy7433 100 VKCLAIDPHEEFFVTGAGDGDIK---------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEH 164 (213)
Q Consensus 100 i~~~~~~~~~~~l~~~~~~~~i~---------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~ 164 (213)
+.++...+++..++.. .+... ..+.++..++++. +..++.++.+..+|. +++.+..+....
T Consensus 179 ~~~~~~d~~g~l~v~t--~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~~~ 254 (330)
T 3hxj_A 179 TSAASIGKDGTIYFGS--DKVYAINPDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINP-DGTEKWRFKTGK 254 (330)
T ss_dssp CSCCEECTTCCEEEES--SSEEEECTTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECT-TSCEEEEEECSS
T ss_pred eeeeEEcCCCEEEEEe--CEEEEECCCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECC-CCCEeEEeeCCC
Confidence 7777777777655443 32221 3366777777765 555666778888874 555555554332
Q ss_pred CceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeC
Q psy7433 165 ARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQL 202 (213)
Q Consensus 165 ~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~ 202 (213)
..+..+...+++.|..++.+|.+..+|.
T Consensus 255 ----------~~~~~~~~~~~g~l~v~t~~ggl~~~d~ 282 (330)
T 3hxj_A 255 ----------RIESSPVIGNTDTIYFGSYDGHLYAINP 282 (330)
T ss_dssp ----------CCCSCCEECTTSCEEEECTTCEEEEECT
T ss_pred ----------CccccceEcCCCeEEEecCCCCEEEECC
Confidence 2233345566778888888988999985
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=98.75 E-value=1.6e-06 Score=70.20 Aligned_cols=178 Identities=15% Similarity=0.137 Sum_probs=103.0
Q ss_pred EEEEeCCCCeEEEeeccCCCc-------------------cEEEEeCCCcccccceeeeeeec---------CCceEEEE
Q psy7433 12 DFVFLGSCSLVATAGHSSESK-------------------NVCLWDSLLPQKKALVQAFVCHD---------QGASSLVF 63 (213)
Q Consensus 12 ~~~~~~~~~~l~~~g~~s~~~-------------------~i~iwd~~~~~~~~~~~~~~~~~---------~~v~~~~~ 63 (213)
.++++|++.+++.+ +.++ .|..+|. .+++.+..++... .+......
T Consensus 239 ~~~~d~~~~~vy~~---~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~---~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~ 312 (689)
T 1yiq_A 239 SFAYDPELNLLYIG---VGNGSLWDPKWRSQAKGDNLFLSSIVAVNA---DTGEYVWHYQTTPGDAWDYTATQHMILAEL 312 (689)
T ss_dssp CEEEETTTTEEEEE---CCCEESSCHHHHHTTCSCCTTTTEEEEEET---TTCCEEEEEESSTTCCSCCCCCSCEEEEEE
T ss_pred ceeEcCCCCEEEEe---CCCCCccccCCCCCCCCCceeeeeEEEEEc---cCCceeEeeecCCcccccccCCCCcEEEee
Confidence 57888988888877 4555 3999998 5666666655321 11112222
Q ss_pred ecCCC---EEEEEcCCCcEEEEeccCceEEEecccCCC-CeeEEEe--------------cCCCC-EEEEecCCCceeec
Q psy7433 64 APQHQ---LLISAGKKGDICVIDLRQRVIRSRFNAHES-PVKCLAI--------------DPHEE-FFVTGAGDGDIKSP 124 (213)
Q Consensus 64 ~~~~~---~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~-~i~~~~~--------------~~~~~-~l~~~~~~~~i~~~ 124 (213)
..+|+ .++.++.+|.++++|.++++.+...+.... ....+.. -++++ .++.-+..|- ..
T Consensus 313 ~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg--~~ 390 (689)
T 1yiq_A 313 PIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGA--HD 390 (689)
T ss_dssp EETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCS--SC
T ss_pred ccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccc--cC
Confidence 23554 788999999999999999988754432110 0111100 01110 1111110000 01
Q ss_pred eEEEEEccCCceEEEec---------------------------------------------CCCcEEEEEccCCeeeee
Q psy7433 125 VKCLAIDPHEEFFVTGA---------------------------------------------GDGDIKVWSLSGNHLLYN 159 (213)
Q Consensus 125 v~~~~~~~~~~~l~~~~---------------------------------------------~dg~i~v~d~~~~~~~~~ 159 (213)
...++|+|+..++++.. .+|.|..||+++++.+-.
T Consensus 391 w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~ 470 (689)
T 1yiq_A 391 WQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWE 470 (689)
T ss_dssp SSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEE
T ss_pred CCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeE
Confidence 12244444444333321 147899999999998877
Q ss_pred ecCCCCceeEEEecCCCeEEEEe-CCCCeEEEEecCCcEEEEeCCCCccc
Q psy7433 160 FPGEHARSSFFKHIGQGVTQLHV-DGGSRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 160 ~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
.+.+. +...-.+ ..++.++.++.||.++.||..+++.+
T Consensus 471 ~~~~~-----------~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~l 509 (689)
T 1yiq_A 471 VPYVT-----------IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKL 509 (689)
T ss_dssp EEESS-----------SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred ccCCC-----------CccCccceECCCEEEEECCCCcEEEEECCCCccc
Confidence 76543 1221122 24678899999999999999998764
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=98.74 E-value=9.1e-06 Score=56.84 Aligned_cols=175 Identities=15% Similarity=0.116 Sum_probs=109.6
Q ss_pred ceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEE-EcCCCcEEEEeccCc
Q psy7433 9 ITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLIS-AGKKGDICVIDLRQR 87 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~v~iwd~~~~ 87 (213)
-...+.|++ +.++.++|. .....|+.+|+ .+++.+..+.... ........+.++.|+. .-.++.+.+||..+.
T Consensus 22 ftqGL~~~~-~~LyestG~-~g~S~v~~vD~---~tgkv~~~~~l~~-~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl 95 (243)
T 3mbr_X 22 FTEGLFYLR-GHLYESTGE-TGRSSVRKVDL---ETGRILQRAEVPP-PYFGAGIVAWRDRLIQLTWRNHEGFVYDLATL 95 (243)
T ss_dssp CEEEEEEET-TEEEEEECC-TTSCEEEEEET---TTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSEEEEEETTTT
T ss_pred ccccEEEEC-CEEEEECCC-CCCceEEEEEC---CCCCEEEEEeCCC-CcceeEEEEeCCEEEEEEeeCCEEEEEECCcC
Confidence 366889986 666676642 12358999999 5677776665332 2333333333445544 446889999999999
Q ss_pred eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee----------------------eceEEEEEccCCceEEEecCCCc
Q psy7433 88 VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----------------------SPVKCLAIDPHEEFFVTGAGDGD 145 (213)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------------~~v~~~~~~~~~~~l~~~~~dg~ 145 (213)
+.+.+++... .-+.++ +++..|+++..++.+. ..++.+.|. +|+.++..-.+..
T Consensus 96 ~~~~ti~~~~-~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~ 171 (243)
T 3mbr_X 96 TPRARFRYPG-EGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSR 171 (243)
T ss_dssp EEEEEEECSS-CCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTE
T ss_pred cEEEEEeCCC-CceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCe
Confidence 9999887533 334454 5566666666566654 233445554 6666666656789
Q ss_pred EEEEEccCCeeeeeecCCCCceeE-E--EecCCCeEEEEeCCC-CeEEEEec
Q psy7433 146 IKVWSLSGNHLLYNFPGEHARSSF-F--KHIGQGVTQLHVDGG-SRLFSCGA 193 (213)
Q Consensus 146 i~v~d~~~~~~~~~~~~~~~~~~~-~--~~~~~~v~~~~~~~~-~~l~s~~~ 193 (213)
|.+.|.++++.+..+......... . .......+.++++|+ ++|+..+.
T Consensus 172 I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 172 IARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 999999999988887643211000 0 112357899999984 45554443
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.74 E-value=1.9e-09 Score=80.89 Aligned_cols=142 Identities=11% Similarity=0.012 Sum_probs=68.5
Q ss_pred eEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecC-Cce-EEEEecCCCEEEEEcCCCcEEEEeccCc
Q psy7433 10 TSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQ-GAS-SLVFAPQHQLLISAGKKGDICVIDLRQR 87 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~-~v~-~~~~~~~~~~l~~~~~d~~v~iwd~~~~ 87 (213)
+.+..+.+++..++++ +.|+.|+.||. .+++.+..+..+.. .+. +..+. .+..+++++.++.++.||.++|
T Consensus 40 ~~s~p~~~~g~~~v~~---s~dg~l~a~d~---~tG~~~w~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG 112 (369)
T 2hz6_A 40 VLQVPTHVEEPAFLPD---PNDGSLYTLGS---KNNEGLTKLPFTIPELVQASPCRS-SDGILYMGKKQDIWYVIDLLTG 112 (369)
T ss_dssp SCCCC-----CCEEEC---TTTCCEEEC--------CCSEECSCCHHHHHTTCSCC------CCCCEEEEEEEEECCC--
T ss_pred ceecceEcCCCEEEEe---CCCCEEEEEEC---CCCceeeeeeccCccccccCceEe-cCCEEEEEeCCCEEEEEECCCC
Confidence 3333344567777776 68999999998 44544444332211 111 11111 3456788888999999999999
Q ss_pred eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee---------------eceEEEEEccCC---ceEEEecCCCcEEEE
Q psy7433 88 VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK---------------SPVKCLAIDPHE---EFFVTGAGDGDIKVW 149 (213)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~---------------~~v~~~~~~~~~---~~l~~~~~dg~i~v~ 149 (213)
+.+..+..+. ...++|++..+++++.++.+. .......++++. ..+++++.+|.+..|
T Consensus 113 ~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~v~~~~~dg~v~a~ 188 (369)
T 2hz6_A 113 EKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFDYAASLPEDDVDYKMSHFVSNGDGLVVTV 188 (369)
T ss_dssp ------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEEECCBCCCCCTTCCCCEEEEETSCEEEEE
T ss_pred cEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEecccccCccccCCccccceEEEECCCCEEEEE
Confidence 8877765433 234566777888887777665 111222333322 567778899999999
Q ss_pred EccCCeeeeeecC
Q psy7433 150 SLSGNHLLYNFPG 162 (213)
Q Consensus 150 d~~~~~~~~~~~~ 162 (213)
|.++++.+.....
T Consensus 189 d~~tG~~~W~~~~ 201 (369)
T 2hz6_A 189 DSESGDVLWIQNY 201 (369)
T ss_dssp CTTTCCEEEEEEC
T ss_pred ECCCCcEEEEecC
Confidence 9999988777664
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=98.70 E-value=1.7e-06 Score=69.96 Aligned_cols=139 Identities=13% Similarity=0.233 Sum_probs=92.1
Q ss_pred eEEEEecCCCEEEEEcCCC-------------------cEEEEeccCceEEEecccCC---------CCeeEEEecCCC-
Q psy7433 59 SSLVFAPQHQLLISAGKKG-------------------DICVIDLRQRVIRSRFNAHE---------SPVKCLAIDPHE- 109 (213)
Q Consensus 59 ~~~~~~~~~~~l~~~~~d~-------------------~v~iwd~~~~~~~~~~~~~~---------~~i~~~~~~~~~- 109 (213)
..++++|++.+++.+..++ .|..+|.++++.+-.++... ....-+....++
T Consensus 246 ~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~ 325 (677)
T 1kb0_A 246 DSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGK 325 (677)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTE
T ss_pred cceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCc
Confidence 3578899888888887664 49999999998887665321 111222222355
Q ss_pred --CEEEEecCCCcee---------------ec-------------e------------------------EEEEEccCCc
Q psy7433 110 --EFFVTGAGDGDIK---------------SP-------------V------------------------KCLAIDPHEE 135 (213)
Q Consensus 110 --~~l~~~~~~~~i~---------------~~-------------v------------------------~~~~~~~~~~ 135 (213)
..++.++.++.+. .+ + ..++++|++.
T Consensus 326 ~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~ 405 (677)
T 1kb0_A 326 PRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTG 405 (677)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTT
T ss_pred EeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCC
Confidence 4666677666554 00 0 1468888888
Q ss_pred eEEEecC-------------------------------------------CCcEEEEEccCCeeeeeecCCCCceeEEEe
Q psy7433 136 FFVTGAG-------------------------------------------DGDIKVWSLSGNHLLYNFPGEHARSSFFKH 172 (213)
Q Consensus 136 ~l~~~~~-------------------------------------------dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~ 172 (213)
++++... .|.|..||+.+++.+-.+....
T Consensus 406 ~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~-------- 477 (677)
T 1kb0_A 406 LVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVS-------- 477 (677)
T ss_dssp EEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESS--------
T ss_pred EEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCC--------
Confidence 7766532 2679999999999877765432
Q ss_pred cCCCeEEEEeC-CCCeEEEEecCCcEEEEeCCCCccc
Q psy7433 173 IGQGVTQLHVD-GGSRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 173 ~~~~v~~~~~~-~~~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
++....+. .++.++.++.||.+++||..+++.+
T Consensus 478 ---~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~l 511 (677)
T 1kb0_A 478 ---PWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKL 511 (677)
T ss_dssp ---SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred ---CCcCcceEeCCCEEEEECCCCcEEEEECCCCcee
Confidence 22222232 4668888899999999999998654
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.67 E-value=4.3e-05 Score=56.80 Aligned_cols=183 Identities=14% Similarity=0.000 Sum_probs=107.2
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCC-EEEEEcCCCcEEEEeccC
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQ-LLISAGKKGDICVIDLRQ 86 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~iwd~~~ 86 (213)
..+..++|++.+..|..+. ...+.|..++++ .......+.........+++.+.+. +.++-...+.|.+.++..
T Consensus 73 ~~~~~l~~d~~~~~ly~~D--~~~~~I~r~~~~---g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG 147 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSD--VTLDRILRANLN---GSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDG 147 (349)
T ss_dssp SCEEEEEEETTTTEEEEEE--TTTTEEEEEETT---SCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CceEEEEEeccccEEEEEe--ccCCceEEEecC---CCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCC
Confidence 3467889997655555442 467889889873 2222222222224467899998554 445555667899999875
Q ss_pred ceEEEecccCCCCeeEEEecCCCCEEEEec-CC-Ccee-----------------eceEEEEEccCCceEEEe-cCCCcE
Q psy7433 87 RVIRSRFNAHESPVKCLAIDPHEEFFVTGA-GD-GDIK-----------------SPVKCLAIDPHEEFFVTG-AGDGDI 146 (213)
Q Consensus 87 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~~-~~i~-----------------~~v~~~~~~~~~~~l~~~-~~dg~i 146 (213)
......+.........++++|.+..+.... .. +.|. .....++++|++..|..+ ...+.|
T Consensus 148 ~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I 227 (349)
T 3v64_C 148 AHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVI 227 (349)
T ss_dssp CSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEE
Confidence 543333333345678999998555444333 33 3332 457889999866655444 556789
Q ss_pred EEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCC
Q psy7433 147 KVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 147 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 205 (213)
..+|+........+.... .....+++..+..+.+-...+.|..++..++
T Consensus 228 ~~~~~dG~~~~~~~~~~~----------~~P~giav~~~~ly~td~~~~~V~~~~~~~G 276 (349)
T 3v64_C 228 ERANLDGSHRKAVISQGL----------PHPFAITVFEDSLYWTDWHTKSINSANKFTG 276 (349)
T ss_dssp EEEETTSCSCEEEECSSC----------SSEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred EEEeCCCCceEEEEeCCC----------CCceEEEEECCEEEEecCCCCeEEEEEccCC
Confidence 999986432222222111 3456677744444555556677777774443
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=98.64 E-value=1.8e-05 Score=62.27 Aligned_cols=152 Identities=9% Similarity=0.059 Sum_probs=105.0
Q ss_pred CceEEEEE-e-CCCCeEEEeec---------------cCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEE
Q psy7433 8 KITSDFVF-L-GSCSLVATAGH---------------SSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLL 70 (213)
Q Consensus 8 ~~v~~~~~-~-~~~~~l~~~g~---------------~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 70 (213)
..+..+++ . |++.++.+++. ...++.+.+.|. .+.+.+.++.-.. ....++++|+|+++
T Consensus 134 ~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~---~t~~v~~qI~Vgg-~pd~~~~spdGk~~ 209 (595)
T 1fwx_A 134 KGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDA---DKWEVAWQVLVSG-NLDNCDADYEGKWA 209 (595)
T ss_dssp CSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEET---TTTEEEEEEEESS-CCCCEEECSSSSEE
T ss_pred CCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEEC---CCCeEEEEEEeCC-CccceEECCCCCEE
Confidence 44677887 4 89998887731 023468899998 4566666665322 45678899999999
Q ss_pred EEEcCCC--------------------------------------cEEEEeccC--ceE-EEecccCCCCeeEEEecCCC
Q psy7433 71 ISAGKKG--------------------------------------DICVIDLRQ--RVI-RSRFNAHESPVKCLAIDPHE 109 (213)
Q Consensus 71 ~~~~~d~--------------------------------------~v~iwd~~~--~~~-~~~~~~~~~~i~~~~~~~~~ 109 (213)
++.+.+. .|.+.|.++ ++. +..++. .....++.++|||
T Consensus 210 ~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDG 288 (595)
T 1fwx_A 210 FSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDK 288 (595)
T ss_dssp EEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTS
T ss_pred EEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCC
Confidence 8887543 366677766 433 344432 3456789999999
Q ss_pred CEEEEecC-CCcee----------------------------eceEEEEEccCCceEEEecCCCcEEEEEccC-------
Q psy7433 110 EFFVTGAG-DGDIK----------------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSG------- 153 (213)
Q Consensus 110 ~~l~~~~~-~~~i~----------------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~------- 153 (213)
+++++++. +..+. .....++|+|+|...++.-.|+.|.+||+.+
T Consensus 289 k~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g 368 (595)
T 1fwx_A 289 KHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAG 368 (595)
T ss_dssp SEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHT
T ss_pred CEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcc
Confidence 98877664 33332 4678899999995555666789999999976
Q ss_pred ---CeeeeeecCCC
Q psy7433 154 ---NHLLYNFPGEH 164 (213)
Q Consensus 154 ---~~~~~~~~~~~ 164 (213)
...+.++..+.
T Consensus 369 ~~~~~vi~kidV~y 382 (595)
T 1fwx_A 369 EKVDPIKDKLDVHY 382 (595)
T ss_dssp CSCCCEEEEEECSS
T ss_pred cccceeEEEeeccc
Confidence 45666666654
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=98.63 E-value=4e-05 Score=54.55 Aligned_cols=148 Identities=8% Similarity=-0.055 Sum_probs=90.4
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeee-eecCCceEEEEecCCCEEEEEcC---CCcEEEEe
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV-CHDQGASSLVFAPQHQLLISAGK---KGDICVID 83 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~---d~~v~iwd 83 (213)
.....++++|++..|..+. ...+.|.+++.+. .....+. ........++++|++..|+.+.. .+.|..++
T Consensus 79 ~~p~~ia~d~~~~~lyv~d--~~~~~I~~~~~~g----~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~ 152 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTD--SQLDRIEVAKMDG----TQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSH 152 (267)
T ss_dssp CCEEEEEEETTTTEEEEEE--TTTTEEEEEETTS----CSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEE
T ss_pred CCccEEEEEecCCeEEEEE--CCCCEEEEEEcCC----CCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEe
Confidence 4678899999755554442 4678899999741 1112221 12245689999997666655543 36788888
Q ss_pred ccCceEEEecccCCCCeeEEEecCCCCEEEEec-CCCcee----------------eceEEEEEccCCceEEEecCCCcE
Q psy7433 84 LRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGA-GDGDIK----------------SPVKCLAIDPHEEFFVTGAGDGDI 146 (213)
Q Consensus 84 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~~~~i~----------------~~v~~~~~~~~~~~l~~~~~dg~i 146 (213)
+..................++++|++..|..+. ..+.+. .....++.. .+.++++....+.|
T Consensus 153 ~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~d-~~~lyva~~~~~~v 231 (267)
T 1npe_A 153 MDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSY-GKNLYYTDWKTNSV 231 (267)
T ss_dssp TTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEEE-TTEEEEEETTTTEE
T ss_pred cCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCCCceEEEEe-CCEEEEEECCCCeE
Confidence 764322111222334578999999876655444 444443 233455544 33444444456899
Q ss_pred EEEEccCCeeeeeecC
Q psy7433 147 KVWSLSGNHLLYNFPG 162 (213)
Q Consensus 147 ~v~d~~~~~~~~~~~~ 162 (213)
.++|..+++.+..+..
T Consensus 232 ~~~d~~~g~~~~~i~~ 247 (267)
T 1npe_A 232 IAMDLAISKEMDTFHP 247 (267)
T ss_dssp EEEETTTTEEEEEECC
T ss_pred EEEeCCCCCceEEEcc
Confidence 9999988888887764
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.60 E-value=7.1e-05 Score=56.42 Aligned_cols=183 Identities=13% Similarity=-0.011 Sum_probs=107.5
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEE-EEEcCCCcEEEEeccC
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLL-ISAGKKGDICVIDLRQ 86 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~v~iwd~~~ 86 (213)
..+..++|.+.+..|..+. ...+.|..++.+ .......+.........+++.+.+..| ++-...+.|.+.++..
T Consensus 116 ~~~~gl~~d~~~~~ly~~D--~~~~~I~r~~~~---g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg 190 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSD--VTLDRILRANLN---GSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDG 190 (386)
T ss_dssp SCEEEEEEETTTTEEEEEE--TTTTEEEEEETT---SCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTS
T ss_pred CccEEEEEecCCCeEEEEe--CCCCcEEEEecC---CCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCC
Confidence 4567899997555554442 467889999873 222212222222345778998755444 4555567888888765
Q ss_pred ceEEEecccCCCCeeEEEecCCCCEEEEecC-C-Ccee-----------------eceEEEEEccCCceEE-EecCCCcE
Q psy7433 87 RVIRSRFNAHESPVKCLAIDPHEEFFVTGAG-D-GDIK-----------------SPVKCLAIDPHEEFFV-TGAGDGDI 146 (213)
Q Consensus 87 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-~-~~i~-----------------~~v~~~~~~~~~~~l~-~~~~dg~i 146 (213)
......+.........++++|.+..|..+.. . +.|. .....++|+|++..|. +-+..+.|
T Consensus 191 ~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I 270 (386)
T 3v65_B 191 AHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVI 270 (386)
T ss_dssp CSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEE
T ss_pred CceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEE
Confidence 4433333333456788999986655444432 2 3332 3468899998666444 44556789
Q ss_pred EEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCC
Q psy7433 147 KVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 147 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 205 (213)
..+|+........+.... .....+++..+..+.+-...+.|..++..++
T Consensus 271 ~~~d~dG~~~~~~~~~~~----------~~P~giav~~~~ly~td~~~~~V~~~~~~~G 319 (386)
T 3v65_B 271 ERANLDGSHRKAVISQGL----------PHPFAITVFEDSLYWTDWHTKSINSANKFTG 319 (386)
T ss_dssp EEECTTSCSCEEEECSSC----------SSEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred EEEeCCCCeeEEEEECCC----------CCceEEEEECCEEEEeeCCCCeEEEEECCCC
Confidence 999875432222222111 3566777754544566666778888875444
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=98.59 E-value=2.7e-05 Score=57.03 Aligned_cols=182 Identities=10% Similarity=0.035 Sum_probs=106.9
Q ss_pred CceEEEEEeC-CCCeEEEeeccCCCccEEEEeCCCcccccceeeeee-----ecCCceEEEEec-CCCEEEEEcC-----
Q psy7433 8 KITSDFVFLG-SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVC-----HDQGASSLVFAP-QHQLLISAGK----- 75 (213)
Q Consensus 8 ~~v~~~~~~~-~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~-----~~~~v~~~~~~~-~~~~l~~~~~----- 75 (213)
..+..+++.+ +++++++. ..+.|..+|.. ... +..+.. .......+++.+ +|++.++-..
T Consensus 80 ~~p~gi~~~~~~g~l~v~d----~~~~i~~~d~~---~g~-~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~ 151 (322)
T 2fp8_A 80 GRTYDISYNLQNNQLYIVD----CYYHLSVVGSE---GGH-ATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDD 151 (322)
T ss_dssp CCEEEEEEETTTTEEEEEE----TTTEEEEECTT---CEE-CEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCT
T ss_pred CCCceEEEcCCCCcEEEEE----CCCCEEEEeCC---CCE-EEEecccCCCCcccccceEEEecCCCEEEEECCcccccc
Confidence 3578899998 77766664 33448888863 221 112211 123467899999 8986665432
Q ss_pred ------------CCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEe-cCCCcee------------------ec
Q psy7433 76 ------------KGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTG-AGDGDIK------------------SP 124 (213)
Q Consensus 76 ------------d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~~~~i~------------------~~ 124 (213)
++.|..+|..+++...... .......++++|+++.+.++ ..++.|. ..
T Consensus 152 ~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g 230 (322)
T 2fp8_A 152 RGVQQIMDTSDKTGRLIKYDPSTKETTLLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN 230 (322)
T ss_dssp TCHHHHHHHTCCCEEEEEEETTTTEEEEEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS
T ss_pred cccceehcccCCCceEEEEeCCCCEEEEecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC
Confidence 3678888887665432222 12335679999998865554 3334442 01
Q ss_pred eEEEEEccCCceEEEecC----------CCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeE-EEEec
Q psy7433 125 VKCLAIDPHEEFFVTGAG----------DGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRL-FSCGA 193 (213)
Q Consensus 125 v~~~~~~~~~~~l~~~~~----------dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l-~s~~~ 193 (213)
...++++++|++.++... .+.|..+|. .++.+..+....... ...++.+.+. ++.| ++...
T Consensus 231 P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~------~~~~~~~~~~-~g~L~v~~~~ 302 (322)
T 2fp8_A 231 PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDE-FGNILEVIPLPPPFA------GEHFEQIQEH-DGLLYIGTLF 302 (322)
T ss_dssp EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECT-TSCEEEEEECCTTTT------TSCCCEEEEE-TTEEEEECSS
T ss_pred CCCeEECCCCCEEEEecCcccccccCCCccEEEEECC-CCCEEEEEECCCCCc------cccceEEEEe-CCEEEEeecC
Confidence 567888899886665544 456778876 466665555432100 0345666664 4554 45556
Q ss_pred CCcEEEEeCCCCc
Q psy7433 194 DGSMKVRQLPDRD 206 (213)
Q Consensus 194 d~~i~iw~~~~~~ 206 (213)
.+.|..+++....
T Consensus 303 ~~~i~~~~~~~~~ 315 (322)
T 2fp8_A 303 HGSVGILVYDKKG 315 (322)
T ss_dssp CSEEEEEEC----
T ss_pred CCceEEEeccccc
Confidence 7889999987543
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=98.57 E-value=2e-06 Score=64.34 Aligned_cols=157 Identities=10% Similarity=-0.046 Sum_probs=103.0
Q ss_pred cEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEc----------CCCcEEEEeccCceEEEecccC------
Q psy7433 33 NVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG----------KKGDICVIDLRQRVIRSRFNAH------ 96 (213)
Q Consensus 33 ~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~v~iwd~~~~~~~~~~~~~------ 96 (213)
.|.+.|. .+.+.+.++.....+ .+.++|++++++.+. .++.|.+||+.+++.+..+...
T Consensus 47 ~vsvID~---~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~ 121 (368)
T 1mda_H 47 ENWVSCA---GCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFS 121 (368)
T ss_dssp EEEEEET---TTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCC
T ss_pred eEEEEEC---CCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccc
Confidence 8889998 677888888766565 799999999998886 3688999999999998887633
Q ss_pred -CCCeeEEEecCCCCEEEEecCC--Cceee------ceEEEE------EccCCc-eEEEecCCCcEEEEEccC-----Ce
Q psy7433 97 -ESPVKCLAIDPHEEFFVTGAGD--GDIKS------PVKCLA------IDPHEE-FFVTGAGDGDIKVWSLSG-----NH 155 (213)
Q Consensus 97 -~~~i~~~~~~~~~~~l~~~~~~--~~i~~------~v~~~~------~~~~~~-~l~~~~~dg~i~v~d~~~-----~~ 155 (213)
......++++|++++++++... ..+.. .+..+. +.|+++ .+++.+.||.+.+.|+.+ ++
T Consensus 122 ~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~tv~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~ 201 (368)
T 1mda_H 122 VGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGI 201 (368)
T ss_dssp BSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEE
T ss_pred cCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhhceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCe
Confidence 1346789999999999988643 22221 122222 245443 455667788888889876 43
Q ss_pred eeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCC
Q psy7433 156 LLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~ 204 (213)
....... .. .....+. ...+++.++..+. +.+.+.|...
T Consensus 202 v~~~~t~-~i-----~vg~~P~---~~~~~~~~~~vs~-~~V~viD~~~ 240 (368)
T 1mda_H 202 VGAQCTG-AQ-----NCSSQAA---QANYPGMLVWAVA-SSILQGDIPA 240 (368)
T ss_dssp CCCCSCT-TS-----CBCSCCE---EETTTTEEEECBS-SCCEEEECCS
T ss_pred EEEEeee-ee-----eCCCCcc---ccccCCEEEEEcC-CEEEEEECCC
Confidence 3221100 00 0001233 2444556555556 8888888864
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=98.57 E-value=7.7e-05 Score=54.62 Aligned_cols=189 Identities=11% Similarity=0.017 Sum_probs=108.2
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceee-eeeecCCceEEEEecCCCEE-EEEcCCCcEEEEecc
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQA-FVCHDQGASSLVFAPQHQLL-ISAGKKGDICVIDLR 85 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l-~~~~~d~~v~iwd~~ 85 (213)
..+.+++|++.+..|..+. ..++.|..++++.......... +.........+++++.+..| ++-...+.|.+.++.
T Consensus 30 ~~p~g~~~d~~~~~ly~~D--~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~ 107 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSD--LSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 107 (316)
T ss_dssp SSEEEEEEETTTTEEEEEE--TTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CceEEEEEEeCCCEEEEEE--CCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCC
Confidence 4467899998665555442 4678999999742100111122 22222456789998755444 454667889999987
Q ss_pred CceEEEecccCCCCeeEEEecCCCCEEEEecCC--Ccee-----------------eceEEEEEccCCceEEEe-cCCCc
Q psy7433 86 QRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGD--GDIK-----------------SPVKCLAIDPHEEFFVTG-AGDGD 145 (213)
Q Consensus 86 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~--~~i~-----------------~~v~~~~~~~~~~~l~~~-~~dg~ 145 (213)
.......+.........++++|.+..+..+... +.|. .....++++|++..|..+ +..+.
T Consensus 108 g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~ 187 (316)
T 1ijq_A 108 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 187 (316)
T ss_dssp SSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred CCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCe
Confidence 544333333334567899999865544433322 3342 356789999876655544 45678
Q ss_pred EEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCc
Q psy7433 146 IKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 146 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~ 206 (213)
|..+|+.............. ......+++..+..+.+-...+.|..++..+++
T Consensus 188 I~~~d~dg~~~~~~~~~~~~--------~~~P~giav~~~~ly~~d~~~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 188 ISSIDVNGGNRKTILEDEKR--------LAHPFSLAVFEDKVFWTDIINEAIFSANRLTGS 240 (316)
T ss_dssp EEEEETTSCSCEEEEECTTT--------TSSEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred EEEEecCCCceEEEeecCCc--------cCCcEEEEEECCEEEEEECCCCeEEEEeCCCCc
Confidence 99999863222111111110 134567777644445555566788888865543
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=98.57 E-value=3.7e-05 Score=56.29 Aligned_cols=138 Identities=11% Similarity=0.075 Sum_probs=86.3
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeee--------------------ecCCceEEEEec-C
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVC--------------------HDQGASSLVFAP-Q 66 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~--------------------~~~~v~~~~~~~-~ 66 (213)
....+++|.++++++.++ ..++.|..|+.+ .. .+..+.. .......+++.+ +
T Consensus 19 ~~p~~i~~d~~g~~l~v~---~~~~~i~~~~~~---~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~ 91 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTS---VQDGRVIKYEGP---NS-GFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQN 91 (322)
T ss_dssp SCCCCEECCTTCSSEEEE---CTTSEEEEECCT---TT-CEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTT
T ss_pred CCceEEEEcCCCCEEEEE---cCCCeEEEECCC---CC-ceEEEecccccccccccccccchhccccCCCCceEEEcCCC
Confidence 346778899999867776 578999999863 21 1222211 123468899998 6
Q ss_pred CCEEEEEcCCCcEEEEeccCceEEEecc---c-CCCCeeEEEecC-CCCEEEEecC-----------------CCcee--
Q psy7433 67 HQLLISAGKKGDICVIDLRQRVIRSRFN---A-HESPVKCLAIDP-HEEFFVTGAG-----------------DGDIK-- 122 (213)
Q Consensus 67 ~~~l~~~~~d~~v~iwd~~~~~~~~~~~---~-~~~~i~~~~~~~-~~~~l~~~~~-----------------~~~i~-- 122 (213)
++ |+.+...+.+..+|..+++...... + .......+++.+ +++.+++... ++.+.
T Consensus 92 g~-l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~ 170 (322)
T 2fp8_A 92 NQ-LYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKY 170 (322)
T ss_dssp TE-EEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEE
T ss_pred Cc-EEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEE
Confidence 65 5444444558888877653221111 1 113467899999 8887666432 12222
Q ss_pred --------------eceEEEEEccCCceEEEe-cCCCcEEEEEccC
Q psy7433 123 --------------SPVKCLAIDPHEEFFVTG-AGDGDIKVWSLSG 153 (213)
Q Consensus 123 --------------~~v~~~~~~~~~~~l~~~-~~dg~i~v~d~~~ 153 (213)
.....++|+|++++|..+ +.++.|.+|++..
T Consensus 171 d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~ 216 (322)
T 2fp8_A 171 DPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEG 216 (322)
T ss_dssp ETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSS
T ss_pred eCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence 235678999999855544 5668999999864
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=98.53 E-value=1.5e-05 Score=65.24 Aligned_cols=103 Identities=11% Similarity=0.047 Sum_probs=65.2
Q ss_pred ceEEEEEe-CCCCeEEEeec--cCCCccEEEEeCCCcccccce-eeeeeecCCceEEEEecCCCEEEEEcCC-----CcE
Q psy7433 9 ITSDFVFL-GSCSLVATAGH--SSESKNVCLWDSLLPQKKALV-QAFVCHDQGASSLVFAPQHQLLISAGKK-----GDI 79 (213)
Q Consensus 9 ~v~~~~~~-~~~~~l~~~g~--~s~~~~i~iwd~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v 79 (213)
.+...+|| |||++||.+.. ++....|+++|+.... +.+ ..+.. ....+.|+|+++.|+....+ ..|
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~--~~l~~~~~~---~~~~~~WspDg~~l~y~~~d~~~~~~~v 249 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPS--QTIADKVSG---TNGEIVWGPDHTSLFYVTKDETLRENKV 249 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTT--CCCCCCEEE---ECSCCEECSSTTEEEEEEECTTCCEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCC--EeCCccccC---ceeeEEEecCCCEEEEEEECCCCCCCEE
Confidence 67889999 99999886531 0122359999995320 221 11221 14568999999888776654 357
Q ss_pred EEEeccCce--EEEecc-cCCCCeeEEEecCCCCEEEEec
Q psy7433 80 CVIDLRQRV--IRSRFN-AHESPVKCLAIDPHEEFFVTGA 116 (213)
Q Consensus 80 ~iwd~~~~~--~~~~~~-~~~~~i~~~~~~~~~~~l~~~~ 116 (213)
..+++.+++ ....+. ........+.|+|++++|+...
T Consensus 250 ~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~ 289 (751)
T 2xe4_A 250 WRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGS 289 (751)
T ss_dssp EEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEE
T ss_pred EEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEe
Confidence 888887653 122222 2233456789999999877655
|
| >3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B | Back alignment and structure |
|---|
Probab=98.52 E-value=0.00011 Score=53.88 Aligned_cols=184 Identities=14% Similarity=0.023 Sum_probs=108.7
Q ss_pred ceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCC-CEEEEEcCCCcEEEEeccCc
Q psy7433 9 ITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQH-QLLISAGKKGDICVIDLRQR 87 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~iwd~~~~ 87 (213)
.+.+++|.+.+..|.-+. ...+.|..++.+.. ......+.........+++.+.+ ++.++-...+.|.++++...
T Consensus 36 ~~~~ld~d~~~~~lyw~D--~~~~~I~r~~~~g~--~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~ 111 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSD--VSEEAIKRTEFNKT--ESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGS 111 (318)
T ss_dssp EEEEEEEEGGGTEEEEEE--TTTTEEEEEETTSS--SCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred ccEEEEEEeCCCEEEEEE--CCCCcEEEEEccCC--CceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCC
Confidence 466888998544444442 46788999987422 11111222223456789999744 44455556778999998754
Q ss_pred eEEEecccCCCCeeEEEecCCCCEEEEecC--CCcee-----------------eceEEEEEccCCceEEEe-cCCCcEE
Q psy7433 88 VIRSRFNAHESPVKCLAIDPHEEFFVTGAG--DGDIK-----------------SPVKCLAIDPHEEFFVTG-AGDGDIK 147 (213)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--~~~i~-----------------~~v~~~~~~~~~~~l~~~-~~dg~i~ 147 (213)
.....+.........+++.|.+..+..+.. .+.|. .....++++|++..|..+ +..+.|.
T Consensus 112 ~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~ 191 (318)
T 3sov_A 112 LRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIH 191 (318)
T ss_dssp SCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred cEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEE
Confidence 333333334456788889886444444332 23332 456889999966655444 5567899
Q ss_pred EEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCc
Q psy7433 148 VWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 148 v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~ 206 (213)
.+|+............. .....+++..+..+.+-...+.|..++..+++
T Consensus 192 ~~d~dG~~~~~~~~~~~----------~~P~glav~~~~lywtd~~~~~V~~~~~~~G~ 240 (318)
T 3sov_A 192 KSNLDGTNRQAVVKGSL----------PHPFALTLFEDILYWTDWSTHSILACNKYTGE 240 (318)
T ss_dssp EEETTSCSCEEEECSCC----------SCEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred EEcCCCCceEEEecCCC----------CCceEEEEeCCEEEEEecCCCeEEEEECCCCC
Confidence 99986322221222111 34667777655556666667788888876554
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=98.49 E-value=2.5e-05 Score=58.45 Aligned_cols=130 Identities=11% Similarity=0.138 Sum_probs=78.6
Q ss_pred CCEEEEEcCCCcEEEEeccCceEEEecccCCCC-------eeEEEecC--CCCEEEEecCCCcee---------------
Q psy7433 67 HQLLISAGKKGDICVIDLRQRVIRSRFNAHESP-------VKCLAIDP--HEEFFVTGAGDGDIK--------------- 122 (213)
Q Consensus 67 ~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~-------i~~~~~~~--~~~~l~~~~~~~~i~--------------- 122 (213)
+..++.+..++.+..+|..+++.+......... +..+...| .+..+.+++.++.+.
T Consensus 188 ~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~ 267 (376)
T 3q7m_A 188 FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKREL 267 (376)
T ss_dssp TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECC
T ss_pred CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccC
Confidence 446778888999999999999877655422100 00011111 234455555555443
Q ss_pred eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeC
Q psy7433 123 SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQL 202 (213)
Q Consensus 123 ~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~ 202 (213)
.....+.. ++..+..++.++.+..+|.++++.+........ ..+...... ++.|+.++.+|.+..+|.
T Consensus 268 ~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~---------~~~~~~~~~-~~~l~v~~~~g~l~~~d~ 335 (376)
T 3q7m_A 268 GSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLH---------RLLTSPVLY-NGNLVVGDSEGYLHWINV 335 (376)
T ss_dssp CCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTT---------SCCCCCEEE-TTEEEEECTTSEEEEEET
T ss_pred CCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCC---------CcccCCEEE-CCEEEEEeCCCeEEEEEC
Confidence 22223333 356677788899999999999988766652111 111111222 568888999999999999
Q ss_pred CCCccc
Q psy7433 203 PDRDAV 208 (213)
Q Consensus 203 ~~~~~~ 208 (213)
.+++..
T Consensus 336 ~tG~~~ 341 (376)
T 3q7m_A 336 EDGRFV 341 (376)
T ss_dssp TTCCEE
T ss_pred CCCcEE
Confidence 887643
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=98.49 E-value=1.1e-05 Score=65.35 Aligned_cols=148 Identities=14% Similarity=0.186 Sum_probs=99.2
Q ss_pred EEEEEeCCCCeEEEeeccCCCc-------------------cEEEEeCCCcccccceeeeeeec---------CCceEEE
Q psy7433 11 SDFVFLGSCSLVATAGHSSESK-------------------NVCLWDSLLPQKKALVQAFVCHD---------QGASSLV 62 (213)
Q Consensus 11 ~~~~~~~~~~~l~~~g~~s~~~-------------------~i~iwd~~~~~~~~~~~~~~~~~---------~~v~~~~ 62 (213)
..++++|++..++.+ ..++ .|..+|. .+++.+..++... .....+.
T Consensus 246 ~~~~~d~~~~~vy~~---~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~---~TG~~~W~~~~~~~d~wd~~~~~~p~l~~ 319 (677)
T 1kb0_A 246 DSMTFDAELNTMYVG---TGNGSPWSHKVRSPKGGDNLYLASIVALDP---DTGKYKWHYQETPGDNWDYTSTQPMILAD 319 (677)
T ss_dssp SCEEEETTTTEEEEE---CCCEESSCHHHHSTTCCCCTTTTEEEEECT---TTCCEEEEEESSTTCCSCCCCCSCCEEEE
T ss_pred cceeEcCCCCEEEEE---CCCCccccCCCCCccCCCCeeeEEEEEEEC---CCCCEEEEEecCCCcccccccCCCcEEEe
Confidence 457888988887776 3443 4889998 5666666655321 1222333
Q ss_pred EecCC---CEEEEEcCCCcEEEEeccCceEEEecccCCC-----------Ce------------------------eEEE
Q psy7433 63 FAPQH---QLLISAGKKGDICVIDLRQRVIRSRFNAHES-----------PV------------------------KCLA 104 (213)
Q Consensus 63 ~~~~~---~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~-----------~i------------------------~~~~ 104 (213)
...+| ..++.++.+|.++++|.++++.+..++.... ++ ..++
T Consensus 320 ~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a 399 (677)
T 1kb0_A 320 IKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMS 399 (677)
T ss_dssp EEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCE
T ss_pred cccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCce
Confidence 33467 6789999999999999999988765542110 01 1568
Q ss_pred ecCCCCEEEEecCC-------------------------------------------Ccee----------------ece
Q psy7433 105 IDPHEEFFVTGAGD-------------------------------------------GDIK----------------SPV 125 (213)
Q Consensus 105 ~~~~~~~l~~~~~~-------------------------------------------~~i~----------------~~v 125 (213)
++|+...+++...+ +.+. .++
T Consensus 400 ~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~ 479 (677)
T 1kb0_A 400 FNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPW 479 (677)
T ss_dssp EETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSC
T ss_pred EcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCC
Confidence 88887777664321 2232 223
Q ss_pred EEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCC
Q psy7433 126 KCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEH 164 (213)
Q Consensus 126 ~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~ 164 (213)
....+...+.+++.++.||.+++||.++++.+..+....
T Consensus 480 ~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~ 518 (677)
T 1kb0_A 480 NGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGT 518 (677)
T ss_dssp CCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred cCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCC
Confidence 334455667788889999999999999999998887653
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=98.47 E-value=3.6e-05 Score=57.56 Aligned_cols=133 Identities=8% Similarity=0.089 Sum_probs=78.5
Q ss_pred CCeEEEeeccCCCccEEEEeCCCcccccceeeeeee---------cCCceEEEEecCCCEEEEEcCCCcEEEEeccCceE
Q psy7433 19 CSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCH---------DQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVI 89 (213)
Q Consensus 19 ~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~---------~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~ 89 (213)
+..+.++ +.++.|..+|. .+++.+...... ...+.. ....++..++.++.++.|..+|.++++.
T Consensus 53 ~~~v~~~---~~~g~v~a~d~---~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~~~~g~l~a~d~~tG~~ 125 (376)
T 3q7m_A 53 DNVVYAA---DRAGLVKALNA---DDGKEIWSVSLAEKDGWFSKEPALLSG-GVTVSGGHVYIGSEKAQVYALNTSDGTV 125 (376)
T ss_dssp TTEEEEE---CTTSEEEEEET---TTCCEEEEEECCC---CCSCCCCCEEE-EEEEETTEEEEEETTSEEEEEETTTCCE
T ss_pred CCEEEEE---cCCCeEEEEEc---cCCceeeeecCccccccccccCccccc-CceEeCCEEEEEcCCCEEEEEECCCCCE
Confidence 4455555 46889999998 455555444332 112222 1222456788888899999999999987
Q ss_pred EEecccCCCCeeEEEecCCCCEEEEecCCCcee----------------ece------EEEEEccCCceEEEecCCCcEE
Q psy7433 90 RSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----------------SPV------KCLAIDPHEEFFVTGAGDGDIK 147 (213)
Q Consensus 90 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------~~v------~~~~~~~~~~~l~~~~~dg~i~ 147 (213)
+................ +..+++++.++.+. ..+ ...... +..++.++.++.+.
T Consensus 126 ~W~~~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~ 201 (376)
T 3q7m_A 126 AWQTKVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVS 201 (376)
T ss_dssp EEEEECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEE
T ss_pred EEEEeCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEE
Confidence 76655332221112222 33555566565443 111 111121 34677788899999
Q ss_pred EEEccCCeeeeeecC
Q psy7433 148 VWSLSGNHLLYNFPG 162 (213)
Q Consensus 148 v~d~~~~~~~~~~~~ 162 (213)
.+|.++++.+.....
T Consensus 202 ~~d~~tG~~~w~~~~ 216 (376)
T 3q7m_A 202 AVLMEQGQMIWQQRI 216 (376)
T ss_dssp EEETTTCCEEEEEEC
T ss_pred EEECCCCcEEEEEec
Confidence 999998887766543
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=98.44 E-value=3.3e-05 Score=54.93 Aligned_cols=153 Identities=11% Similarity=0.067 Sum_probs=96.1
Q ss_pred cceeeeeeecC--CceEEEEecCCCEEEEEcC--CCcEEEEeccCceEEEecccCCC-CeeEEEecCCCCEEEEec-CCC
Q psy7433 46 ALVQAFVCHDQ--GASSLVFAPQHQLLISAGK--KGDICVIDLRQRVIRSRFNAHES-PVKCLAIDPHEEFFVTGA-GDG 119 (213)
Q Consensus 46 ~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~--d~~v~iwd~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~-~~~ 119 (213)
+.+.++. |.. ....+.|++++.+.++.+. ++.|.++|+.+++.+..+.-... ....+++. +..+..+. .++
T Consensus 10 ~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~ 86 (266)
T 2iwa_A 10 EVLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKN 86 (266)
T ss_dssp EEEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCS
T ss_pred eEEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCC
Confidence 4555553 443 2578999998754444443 57999999999998887653222 22345554 44444444 334
Q ss_pred cee----------e----c-eEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCC
Q psy7433 120 DIK----------S----P-VKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG 184 (213)
Q Consensus 120 ~i~----------~----~-v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 184 (213)
.+. . . .....+++|++.++++..++.|.++|..+.+.+..+........ -..++.+.+.
T Consensus 87 ~v~viD~~t~~v~~~i~~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p-----~~~~nele~~- 160 (266)
T 2iwa_A 87 IGFIYDRRTLSNIKNFTHQMKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHR-----VIRLNELEYI- 160 (266)
T ss_dssp EEEEEETTTTEEEEEEECCSSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEE-----CCCEEEEEEE-
T ss_pred EEEEEECCCCcEEEEEECCCCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcc-----cccceeEEEE-
Confidence 332 1 1 22335677888777777789999999999888777764321000 0236677777
Q ss_pred CCeEE-EEecCCcEEEEeCCCCcc
Q psy7433 185 GSRLF-SCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 185 ~~~l~-s~~~d~~i~iw~~~~~~~ 207 (213)
++++. ....++.|.+.|..+++.
T Consensus 161 dg~lyvn~~~~~~V~vID~~tg~V 184 (266)
T 2iwa_A 161 NGEVWANIWQTDCIARISAKDGTL 184 (266)
T ss_dssp TTEEEEEETTSSEEEEEETTTCCE
T ss_pred CCEEEEecCCCCeEEEEECCCCcE
Confidence 45654 444678999999988754
|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
Probab=98.44 E-value=0.00023 Score=53.93 Aligned_cols=189 Identities=11% Similarity=0.034 Sum_probs=111.3
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCccc-ccceeeeeeecCCceEEEEec-CCCEEEEEcCCCcEEEEec
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQK-KALVQAFVCHDQGASSLVFAP-QHQLLISAGKKGDICVIDL 84 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~-~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~iwd~ 84 (213)
.+.+.+++|++.+..|..+. ...+.|+.++++.... ......+.........+++.+ .+++.++-...+.|.+.++
T Consensus 111 ~~~~~~l~~d~~~~~lywsD--~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~ 188 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSD--LSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT 188 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEE--TTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECT
T ss_pred cCcceEEeeeeccCceEEEe--cCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeC
Confidence 35678899998655555442 4678888888742110 112222222334567899998 4445555556788999998
Q ss_pred cCceEEEecccCCCCeeEEEecCCCCEEEEec-C-CCcee-----------------eceEEEEEccCCceEEEe-cCCC
Q psy7433 85 RQRVIRSRFNAHESPVKCLAIDPHEEFFVTGA-G-DGDIK-----------------SPVKCLAIDPHEEFFVTG-AGDG 144 (213)
Q Consensus 85 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~-~~~i~-----------------~~v~~~~~~~~~~~l~~~-~~dg 144 (213)
+.......+.........++++|.+..|.... . .+.|. .....+++++++..|..+ ...+
T Consensus 189 ~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~ 268 (400)
T 3p5b_L 189 KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH 268 (400)
T ss_dssp TTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred CCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCC
Confidence 76544444443445578999998655444433 2 23332 457889999877655555 4567
Q ss_pred cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCC
Q psy7433 145 DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 145 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 205 (213)
.|..+|+............... ....++++..+..+.+-...+.|..++..++
T Consensus 269 ~I~~~d~dG~~~~~~~~~~~~l--------~~P~gl~v~~~~lywtd~~~~~V~~~~~~~G 321 (400)
T 3p5b_L 269 SISSIDVNGGNRKTILEDEKRL--------AHPFSLAVFEDKVFWTDIINEAIFSANRLTG 321 (400)
T ss_dssp EEEEEETTSCCCEEEEECSSTT--------SSEEEEEEETTEEEEEESSSCSEEEEESSSC
T ss_pred EEEEEeCCCCccEEEEeCCCCC--------CCCEEEEEeCCEEEEecCCCCeEEEEEcCCC
Confidence 8999998643332222221110 3455667654545566666678888875554
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=98.41 E-value=8.7e-06 Score=65.77 Aligned_cols=178 Identities=13% Similarity=0.150 Sum_probs=101.2
Q ss_pred EEEEEeCCCCeEEEeeccCCCc-------------------cEEEEeCCCcccccceeeeeee--c-------CCceEEE
Q psy7433 11 SDFVFLGSCSLVATAGHSSESK-------------------NVCLWDSLLPQKKALVQAFVCH--D-------QGASSLV 62 (213)
Q Consensus 11 ~~~~~~~~~~~l~~~g~~s~~~-------------------~i~iwd~~~~~~~~~~~~~~~~--~-------~~v~~~~ 62 (213)
..+++.|+...++.+ +.++ .|..+|. .+++.+..++.. . .+.....
T Consensus 233 ~~~a~d~~~~~vy~~---~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~---~tG~~~W~~~~~~~~~wd~~~~~~~~~~d 306 (668)
T 1kv9_A 233 DSMAYDPELDLLYVG---TGNGSPWNREVRSPGGGDNLYLSSILAIRP---DTGKLAWHYQVTPGDSWDFTATQQITLAE 306 (668)
T ss_dssp SCEEEETTTTEEEEE---CCCEESSCHHHHSTTCCCCTTTTEEEEECT---TTCCEEEEEESSTTCCSCCCCCSCEEEEE
T ss_pred cceEEcCCCCEEEEe---CCCCCccccCCCCCCCCCceeeeeEEEEcC---CCCceeeEeecCCCccccccCCCCcEEEE
Confidence 357888887777776 4454 4889998 566666665532 1 2222223
Q ss_pred EecCCC---EEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecC-CCC-------------EEEEecCCCceeece
Q psy7433 63 FAPQHQ---LLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDP-HEE-------------FFVTGAGDGDIKSPV 125 (213)
Q Consensus 63 ~~~~~~---~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~-~~~-------------~l~~~~~~~~i~~~v 125 (213)
+..+++ .++.++.+|.++++|.++++.+...+..... +...+.+ .+. .++.-+..+. ..-
T Consensus 307 ~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~-w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~--~~w 383 (668)
T 1kv9_A 307 LNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVT-WAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGA--HNW 383 (668)
T ss_dssp EEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCC-SEEEECTTTCCEEECTTTTCSSSCEEESSCTTCS--SCS
T ss_pred eccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccc-cccccccccCCccccccccccCCeeEECCCCccc--cCC
Confidence 334664 6889999999999999999887554322210 1111110 000 0000000000 011
Q ss_pred EEEEEccCCceEEE------------------------------------ecCCCcEEEEEccCCeeeeeecCCCCceeE
Q psy7433 126 KCLAIDPHEEFFVT------------------------------------GAGDGDIKVWSLSGNHLLYNFPGEHARSSF 169 (213)
Q Consensus 126 ~~~~~~~~~~~l~~------------------------------------~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~ 169 (213)
..++++|+..++.+ ...+|.|..||+.+++.+-......
T Consensus 384 ~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~----- 458 (668)
T 1kv9_A 384 HSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPT----- 458 (668)
T ss_dssp SCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESS-----
T ss_pred CcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCC-----
Confidence 12344444332221 2245889999999999877665432
Q ss_pred EEecCCCeEEEEe-CCCCeEEEEecCCcEEEEeCCCCccc
Q psy7433 170 FKHIGQGVTQLHV-DGGSRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 170 ~~~~~~~v~~~~~-~~~~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
+.....+ ..++.++.++.|+.++.||..+++.+
T Consensus 459 ------~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l 492 (668)
T 1kv9_A 459 ------HWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEAL 492 (668)
T ss_dssp ------SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred ------CCcCceeEeCCCEEEEECCcccchhhhhhcChhh
Confidence 1211111 24678888999999999999988654
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=98.36 E-value=3.5e-05 Score=54.40 Aligned_cols=151 Identities=9% Similarity=0.086 Sum_probs=91.5
Q ss_pred ceeeeeeecCCc--eEEEEecCCCEEEEEcCCC--cEEEEeccCceEEEecccCCCC-eeEEEecCCCCEEEEecC-CCc
Q psy7433 47 LVQAFVCHDQGA--SSLVFAPQHQLLISAGKKG--DICVIDLRQRVIRSRFNAHESP-VKCLAIDPHEEFFVTGAG-DGD 120 (213)
Q Consensus 47 ~~~~~~~~~~~v--~~~~~~~~~~~l~~~~~d~--~v~iwd~~~~~~~~~~~~~~~~-i~~~~~~~~~~~l~~~~~-~~~ 120 (213)
.++.++ |.... ..+.|+ ++.++.+.+.+| .|+.+|+++++.+..+.-.... -..++.. +..+..... ++.
T Consensus 33 vv~~~p-hd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~--g~~ly~ltw~~~~ 108 (262)
T 3nol_A 33 IVHSYP-HDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDW--KDKIVGLTWKNGL 108 (262)
T ss_dssp EEEEEE-CCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSE
T ss_pred EEEEec-CCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEe--CCEEEEEEeeCCE
Confidence 445553 44433 778888 666666766665 8999999999988877643222 1224443 444444432 333
Q ss_pred ee--------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC
Q psy7433 121 IK--------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS 186 (213)
Q Consensus 121 i~--------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 186 (213)
+. ..-....+.++++.|+.+..++.|.++|..+.+.+..+........ -..++.+.|. ++
T Consensus 109 v~v~D~~t~~~~~ti~~~~eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~-----~~~lNELe~~-~G 182 (262)
T 3nol_A 109 GFVWNIRNLRQVRSFNYDGEGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEE-----LPELNELEWV-DG 182 (262)
T ss_dssp EEEEETTTCCEEEEEECSSCCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEE-----CCCEEEEEEE-TT
T ss_pred EEEEECccCcEEEEEECCCCceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCcc-----ccccceeEEE-CC
Confidence 32 1112244556778777777788999999999888877765321000 0234556676 44
Q ss_pred eEEE-EecCCcEEEEeCCCCcc
Q psy7433 187 RLFS-CGADGSMKVRQLPDRDA 207 (213)
Q Consensus 187 ~l~s-~~~d~~i~iw~~~~~~~ 207 (213)
+|.+ .-.++.|.+.|..+++.
T Consensus 183 ~lyan~w~~~~I~vIDp~tG~V 204 (262)
T 3nol_A 183 EIFANVWQTNKIVRIDPETGKV 204 (262)
T ss_dssp EEEEEETTSSEEEEECTTTCBE
T ss_pred EEEEEEccCCeEEEEECCCCcE
Confidence 5444 44577888888887753
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=0.00085 Score=55.34 Aligned_cols=182 Identities=9% Similarity=0.134 Sum_probs=114.6
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeee---------eecCCceEEEEecCCCEEEEEcCCC
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV---------CHDQGASSLVFAPQHQLLISAGKKG 77 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~l~~~~~d~ 77 (213)
...|.++...++|.+-+.+ .++-|..|+.. +.. ...+. .....|.+++..++++.|..|+.++
T Consensus 356 ~~~V~~i~~d~~g~lWiGt----~~~Gl~~~~~~---~~~-~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~ 427 (795)
T 4a2l_A 356 DNVVSCIVEDKDKNLWIGT----NDGGLNLYNPI---TQR-FTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAG 427 (795)
T ss_dssp CSSEEEEEECTTSCEEEEE----SSSCEEEECTT---TCC-EEEECCC------CCSCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCeeEEEEECCCCCEEEEE----CCCCeEEEcCC---CCc-EEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcC
Confidence 3469999998888877654 56779999863 222 11211 1135688998888888566677767
Q ss_pred cEEEEeccCceEEEecc----cCCCCeeEEEecCCCCEEEEecCCCcee----------------------eceEEEEEc
Q psy7433 78 DICVIDLRQRVIRSRFN----AHESPVKCLAIDPHEEFFVTGAGDGDIK----------------------SPVKCLAID 131 (213)
Q Consensus 78 ~v~iwd~~~~~~~~~~~----~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------------~~v~~~~~~ 131 (213)
-|..||..+++...... .....|.++...+++...+... +|..+ ..|.++..+
T Consensus 428 Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d 506 (795)
T 4a2l_A 428 GLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRD 506 (795)
T ss_dssp EEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEEC
T ss_pred ceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-CceeEEeCCCCeEEEccccccccccCCceEEEEEEC
Confidence 79999988775443221 1235688888888777554433 44222 246778888
Q ss_pred cCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCC
Q psy7433 132 PHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 132 ~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 205 (213)
++|++.+.. . +-+..||..+.+. .+....... ......|.++..++++.|..++.. .+..||..++
T Consensus 507 ~~g~lWigt-~-~Gl~~~~~~~~~~--~~~~~~~~~---~l~~~~i~~i~~d~~g~lWigT~~-Gl~~~d~~~~ 572 (795)
T 4a2l_A 507 SHKRLWIGG-E-EGLSVFKQEGLDI--QKASILPVS---NVTKLFTNCIYEASNGIIWVGTRE-GFYCFNEKDK 572 (795)
T ss_dssp TTCCEEEEE-S-SCEEEEEEETTEE--EECCCSCSC---GGGGSCEEEEEECTTSCEEEEESS-CEEEEETTTT
T ss_pred CCCCEEEEe-C-CceEEEeCCCCeE--EEecCCCCC---CCCCCeeEEEEECCCCCEEEEeCC-CceeECCCCC
Confidence 888755544 3 4588899877655 222100000 001257899998887776666665 5778887654
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=98.32 E-value=2.7e-05 Score=55.05 Aligned_cols=151 Identities=13% Similarity=0.099 Sum_probs=92.0
Q ss_pred cceeeeeeecCC--ceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCCCCe--eEEEecCCCCEEEEec-CCCc
Q psy7433 46 ALVQAFVCHDQG--ASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPV--KCLAIDPHEEFFVTGA-GDGD 120 (213)
Q Consensus 46 ~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i--~~~~~~~~~~~l~~~~-~~~~ 120 (213)
+.++.++ |... ...+.|+ ++.+..+.+.+|.|+.+|+++++.+..+ -. ... ..+++. ++.+.... .++.
T Consensus 44 ~Vv~~~p-hd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~~--g~~Ly~ltw~~~~ 117 (268)
T 3nok_A 44 HIIREYP-HATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RL-GNIFAEGLASD--GERLYQLTWTEGL 117 (268)
T ss_dssp EEEEEEE-CCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-EC-TTCCEEEEEEC--SSCEEEEESSSCE
T ss_pred EEEEEEc-CCCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CC-CCcceeEEEEe--CCEEEEEEccCCE
Confidence 3445553 4433 3678887 4567778888899999999999877776 22 222 234444 33333333 3333
Q ss_pred ee-------ece-------EEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC
Q psy7433 121 IK-------SPV-------KCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS 186 (213)
Q Consensus 121 i~-------~~v-------~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 186 (213)
+. ..+ ....+.++++.|+.+..++.|.++|..+.+.+.++........ -..++.+.|..+.
T Consensus 118 v~V~D~~Tl~~~~ti~~~~eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~-----v~~lNeLe~~dG~ 192 (268)
T 3nok_A 118 LFTWSGMPPQRERTTRYSGEGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQP-----VELINELECANGV 192 (268)
T ss_dssp EEEEETTTTEEEEEEECSSCCCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEE-----CCCEEEEEEETTE
T ss_pred EEEEECCcCcEEEEEeCCCceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcc-----cccccccEEeCCE
Confidence 32 111 1233345677777777789999999999888877765321110 0245667777443
Q ss_pred eEEEEecCCcEEEEeCCCCcc
Q psy7433 187 RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 187 ~l~s~~~d~~i~iw~~~~~~~ 207 (213)
.++..-.++.|.+.|..+++.
T Consensus 193 lyanvw~s~~I~vIDp~TG~V 213 (268)
T 3nok_A 193 IYANIWHSSDVLEIDPATGTV 213 (268)
T ss_dssp EEEEETTCSEEEEECTTTCBE
T ss_pred EEEEECCCCeEEEEeCCCCcE
Confidence 344444677899999888753
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
Probab=98.32 E-value=1.4e-05 Score=64.87 Aligned_cols=188 Identities=11% Similarity=0.039 Sum_probs=103.9
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCccc-ccceeeeeeecCCceEEEEecCC-CEEEEEcCCCcEEEEecc
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQK-KALVQAFVCHDQGASSLVFAPQH-QLLISAGKKGDICVIDLR 85 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~iwd~~ 85 (213)
..+.+++|.+.+..|..+. ...+.|+.+++..... ......+.........+++.+.+ +++++-...+.|.++++.
T Consensus 406 ~~p~gla~d~~~~~Ly~sD--~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~d 483 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSD--LSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 483 (699)
T ss_dssp TTCCCCEEETTTTEEEECC--TTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSS
T ss_pred cceEEEccccccCeEEEEe--cCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecC
Confidence 3456788998666666552 3567899998742100 11111111112234568888644 444444556889999987
Q ss_pred CceEEEecccCCCCeeEEEecCCCCEEEEecC-C-Ccee-----------------eceEEEEEccCCce-EEEecCCCc
Q psy7433 86 QRVIRSRFNAHESPVKCLAIDPHEEFFVTGAG-D-GDIK-----------------SPVKCLAIDPHEEF-FVTGAGDGD 145 (213)
Q Consensus 86 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-~-~~i~-----------------~~v~~~~~~~~~~~-l~~~~~dg~ 145 (213)
.......+.........++++|.+..|+.+.. . +.|. .....|+|+|++.. +++-+..+.
T Consensus 484 g~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~ 563 (699)
T 1n7d_A 484 GVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 563 (699)
T ss_dssp SCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTE
T ss_pred CCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCe
Confidence 65444334333345678889886554444332 1 2332 34567999987654 444456678
Q ss_pred EEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCC
Q psy7433 146 IKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 146 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 205 (213)
|.++|+........+..... ......+++..+..+++....+.|..++..++
T Consensus 564 I~~~d~dG~~~~~~~~~~~~--------~~~P~glavd~~~lywtd~~~~~V~~~d~~~G 615 (699)
T 1n7d_A 564 ISSIDVNGGNRKTILEDEKR--------LAHPFSLAVFEDKVFWTDIINEAIFSANRLTG 615 (699)
T ss_dssp EEEECSSSSCCEEECCCSSS--------CSSCCCCEEETTEEEEECSTTTCEEEEETTTE
T ss_pred EEEEccCCCceEEEEecCCc--------CCCceEeEEECCEEEEEeCCCCeEEEEEccCC
Confidence 99999864322222211110 02233445555544556556678888876554
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=98.31 E-value=0.0009 Score=55.18 Aligned_cols=187 Identities=13% Similarity=0.183 Sum_probs=115.2
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeee--------ecCCceEEEEecCCCEEEEEcCCCc
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVC--------HDQGASSLVFAPQHQLLISAGKKGD 78 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~--------~~~~v~~~~~~~~~~~l~~~~~d~~ 78 (213)
...|.++...+++.+.+.+ .++-+.+||.. ..+ ...+.. ....|.++...++|.+.+.. .+ -
T Consensus 214 ~~~i~~i~~d~~g~lwigt----~~~Gl~~~~~~---~~~-~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt-~~-G 283 (795)
T 4a2l_A 214 TKQIQAILQQSPTRIWVAT----EGAGLFLINPK---TKE-IKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGT-FN-D 283 (795)
T ss_dssp CCCEEEEEEEETTEEEEEE----BSSCEEEEETT---TTE-EEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEE-SS-C
T ss_pred CCeeEEEEEcCCCCEEEEE----CCCCeEEEeCC---CCe-EEEeecCCCCccccCCCeEEEEEEcCCCCEEEEe-CC-h
Confidence 4568888888888777755 34458889863 222 122211 13568899988888755544 44 5
Q ss_pred EEEEeccCceEEEeccc-------CCCCeeEEEecCCCCEEEEecCCCcee----------------------eceEEEE
Q psy7433 79 ICVIDLRQRVIRSRFNA-------HESPVKCLAIDPHEEFFVTGAGDGDIK----------------------SPVKCLA 129 (213)
Q Consensus 79 v~iwd~~~~~~~~~~~~-------~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------------~~v~~~~ 129 (213)
|.+||..+++....... ....|.++...+++...+.....|..+ ..|.++.
T Consensus 284 l~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~ 363 (795)
T 4a2l_A 284 LNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIV 363 (795)
T ss_dssp EEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEE
T ss_pred hheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEE
Confidence 88899877754432211 235688999998887544333233221 3478888
Q ss_pred EccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEecCCcEEEEeCCCCc
Q psy7433 130 IDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 130 ~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~d~~i~iw~~~~~~ 206 (213)
.+++|. |-.|+.++-|..||.+++............. .......|.++...+++. |..|+.++.+..||..+++
T Consensus 364 ~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~--~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~ 438 (795)
T 4a2l_A 364 EDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESA--RGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQ 438 (795)
T ss_dssp ECTTSC-EEEEESSSCEEEECTTTCCEEEECCC--------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCC
T ss_pred ECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcc--cCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCc
Confidence 888877 4457777778899987654332211110000 000125789999888777 8888887889999887653
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.23 E-value=0.00067 Score=50.37 Aligned_cols=177 Identities=16% Similarity=0.135 Sum_probs=101.0
Q ss_pred eEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEE-cCCCcEEEEeccCce
Q psy7433 10 TSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISA-GKKGDICVIDLRQRV 88 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~v~iwd~~~~~ 88 (213)
..|.+..++ .+|+.+ ....|+..++. .. ....+.........++|++....|+.. ...+.|..+++....
T Consensus 36 ~~C~~~~~~-~~ll~~----~~~~I~~i~~~---g~-~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~ 106 (349)
T 3v64_C 36 RSCKALGPE-PVLLFA----NRIDIRQVLPH---RS-EYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 106 (349)
T ss_dssp SCEEESSSC-CEEEEE----CBSCEEEECTT---SC-CEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CcccccccC-ceeEee----cccceEEEeCC---CC-eeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCC
Confidence 344444453 344443 35668888763 22 222222233457899999866555554 456789899987664
Q ss_pred EEEecccCCCCeeEEEecCCCC-EEEEecCCCcee-----------------eceEEEEEccCCceEE-EecCC-CcEEE
Q psy7433 89 IRSRFNAHESPVKCLAIDPHEE-FFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFV-TGAGD-GDIKV 148 (213)
Q Consensus 89 ~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~-~~~~d-g~i~v 148 (213)
....+.........+++.+.+. .+++-...+.|. .....++++|.+..|. +-..+ +.|..
T Consensus 107 ~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r 186 (349)
T 3v64_C 107 VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEA 186 (349)
T ss_dssp CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEE
T ss_pred ceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEE
Confidence 3333332334456788887444 333333333332 4578899998655444 44444 77888
Q ss_pred EEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCC-CCeEEE-EecCCcEEEEeCCCC
Q psy7433 149 WSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG-GSRLFS-CGADGSMKVRQLPDR 205 (213)
Q Consensus 149 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~s-~~~d~~i~iw~~~~~ 205 (213)
+++..... ..+.... ....+.++++| +++|+. -...+.|..+++...
T Consensus 187 ~~~dG~~~-~~~~~~~---------~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~ 235 (349)
T 3v64_C 187 SSMDGSGR-RIIADTH---------LFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS 235 (349)
T ss_dssp EETTSCSC-EESCCSS---------CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred EeCCCCCc-EEEEECC---------CCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 88753322 2221111 14578899996 555544 445678888887643
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=98.21 E-value=0.00025 Score=49.62 Aligned_cols=153 Identities=12% Similarity=0.083 Sum_probs=90.1
Q ss_pred cceeeeeeecC--CceEEEEecCCCEEEEEcCC--CcEEEEeccCceEEEecccCCCC-eeEEEecCCCCEEEEec-CCC
Q psy7433 46 ALVQAFVCHDQ--GASSLVFAPQHQLLISAGKK--GDICVIDLRQRVIRSRFNAHESP-VKCLAIDPHEEFFVTGA-GDG 119 (213)
Q Consensus 46 ~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d--~~v~iwd~~~~~~~~~~~~~~~~-i~~~~~~~~~~~l~~~~-~~~ 119 (213)
+.++.+ .|.. -...+.|+. +.+..+.+.+ +.|+.+|+.+++.+..+.-.... -..++.. +..+.... .++
T Consensus 10 ~v~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~ 85 (243)
T 3mbr_X 10 RVVKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNH 85 (243)
T ss_dssp EEEEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSS
T ss_pred EEEEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCC
Confidence 344555 3543 355888886 5556666664 48999999999988877533221 1233333 33333333 333
Q ss_pred cee--------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCC
Q psy7433 120 DIK--------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG 185 (213)
Q Consensus 120 ~i~--------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 185 (213)
.+. ..-....+.++++.|+++..++.|.++|..+.+.+.++........ -..++.+.+..+
T Consensus 86 ~v~v~D~~tl~~~~ti~~~~~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~-----~~~lNeLe~~~G 160 (243)
T 3mbr_X 86 EGFVYDLATLTPRARFRYPGEGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRP-----LDNLNELEWVNG 160 (243)
T ss_dssp EEEEEETTTTEEEEEEECSSCCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEE-----CCCEEEEEEETT
T ss_pred EEEEEECCcCcEEEEEeCCCCceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcc-----cccceeeEEeCC
Confidence 332 1112234446677777777788999999999888777765321100 024566666643
Q ss_pred CeEEEEecCCcEEEEeCCCCcc
Q psy7433 186 SRLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 186 ~~l~s~~~d~~i~iw~~~~~~~ 207 (213)
..++..-.+..|.+.|..+++.
T Consensus 161 ~lyanvw~s~~I~vIDp~tG~V 182 (243)
T 3mbr_X 161 ELLANVWLTSRIARIDPASGKV 182 (243)
T ss_dssp EEEEEETTTTEEEEECTTTCBE
T ss_pred EEEEEECCCCeEEEEECCCCCE
Confidence 3344444577888888887753
|
| >3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.20 E-value=0.0013 Score=54.05 Aligned_cols=180 Identities=12% Similarity=0.141 Sum_probs=111.0
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeee----eeecCCceEEEEecCCCEEEEEcCCCcEEEEe
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAF----VCHDQGASSLVFAPQHQLLISAGKKGDICVID 83 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd 83 (213)
..|.++...++|.+.+.+ .++-|..|+.. .... ..+ ......|.++...+++++.+ |+.++-+..+|
T Consensus 363 ~~v~~i~~d~~g~lWigt----~~~Gl~~~~~~---~~~~-~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~ 433 (781)
T 3v9f_A 363 KVVSSVCDDGQGKLWIGT----DGGGINVFENG---KRVA-IYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYN 433 (781)
T ss_dssp SCEEEEEECTTSCEEEEE----BSSCEEEEETT---EEEE-ECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEEC
T ss_pred cceEEEEEcCCCCEEEEe----CCCcEEEEECC---CCeE-EEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEc
Confidence 568999988888776654 45668889863 2211 111 11235688888887776544 66666788999
Q ss_pred ccCceEEEecc--cCCCCeeEEEecCCCCEEEEecCCCcee---------------------eceEEEEEccCCceEEEe
Q psy7433 84 LRQRVIRSRFN--AHESPVKCLAIDPHEEFFVTGAGDGDIK---------------------SPVKCLAIDPHEEFFVTG 140 (213)
Q Consensus 84 ~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~~~~i~---------------------~~v~~~~~~~~~~~l~~~ 140 (213)
..+++...... .....|.++...+++...+. +..|..+ ..|.++...++|++.+ |
T Consensus 434 ~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwig-t~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-g 511 (781)
T 3v9f_A 434 TRLKKFQIIELEKNELLDVRVFYEDKNKKIWIG-THAGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWI-G 511 (781)
T ss_dssp SSSCEEEECCSTTTCCCCEEEEEECTTSEEEEE-ETTEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEE-E
T ss_pred CCCCcEEEeccCCCCCCeEEEEEECCCCCEEEE-ECCceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEE-E
Confidence 87775433221 13457888888887764443 3344222 2477888888887554 4
Q ss_pred cCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCC
Q psy7433 141 AGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 141 ~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 205 (213)
+.++-+..||.++.+.. .+...... ....|.++...+++.|..++.+|.+..||..++
T Consensus 512 t~~~Gl~~~~~~~~~~~-~~~~~~~l------~~~~i~~i~~d~~g~lWi~T~~Glv~~~d~~~~ 569 (781)
T 3v9f_A 512 TFGGGVGIYTPDMQLVR-KFNQYEGF------CSNTINQIYRSSKGQMWLATGEGLVCFPSARNF 569 (781)
T ss_dssp ESSSCEEEECTTCCEEE-EECTTTTC------SCSCEEEEEECTTSCEEEEETTEEEEESCTTTC
T ss_pred EcCCCEEEEeCCCCeEE-EccCCCCC------CCCeeEEEEECCCCCEEEEECCCceEEECCCCC
Confidence 44334777887655433 23221110 025789999888777776766665588887654
|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.18 E-value=0.0003 Score=53.81 Aligned_cols=138 Identities=12% Similarity=0.170 Sum_probs=90.9
Q ss_pred CceEEEEec-CCCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecC-CCce----e--------
Q psy7433 57 GASSLVFAP-QHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAG-DGDI----K-------- 122 (213)
Q Consensus 57 ~v~~~~~~~-~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-~~~i----~-------- 122 (213)
....++++| ++..|+.+...+.|+.+|+..+....... .......++++++++.|+++.. ++.+ .
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~ 216 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGF 216 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTS
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCce
Confidence 457899998 45566666555889999998766544333 4556789999999995555543 2211 0
Q ss_pred ---------eceEEEEEcc-CCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EE-E
Q psy7433 123 ---------SPVKCLAIDP-HEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LF-S 190 (213)
Q Consensus 123 ---------~~v~~~~~~~-~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~-s 190 (213)
..+..++++| ++.++++-..++.|..++...+.......... ......++++|++. |+ +
T Consensus 217 ~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~---------~~~P~gia~~pdG~~lyv~ 287 (430)
T 3tc9_A 217 KVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQD---------SGWEFHIQFHPSGNYAYIV 287 (430)
T ss_dssp CSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSS---------SSCCEEEEECTTSSEEEEE
T ss_pred eeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCC---------CCcceeEEEcCCCCEEEEE
Confidence 3356788999 67666666677899999987665422221111 13467899999764 44 4
Q ss_pred EecCCcEEEEeCCC
Q psy7433 191 CGADGSMKVRQLPD 204 (213)
Q Consensus 191 ~~~d~~i~iw~~~~ 204 (213)
-...+.|..++...
T Consensus 288 d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 288 VVNQHYILRSDYDW 301 (430)
T ss_dssp ETTTTEEEEEEEET
T ss_pred ECCCCEEEEEeCCc
Confidence 44667888887653
|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.17 E-value=0.0019 Score=53.18 Aligned_cols=189 Identities=11% Similarity=0.037 Sum_probs=106.7
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCccc-ccceeeeeeecCCceEEEEecCCCEEE-EEcCCCcEEEEec
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQK-KALVQAFVCHDQGASSLVFAPQHQLLI-SAGKKGDICVIDL 84 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~v~iwd~ 84 (213)
.+.+.+|+|.+.+..|..+. ...+.|+.++++.... ......+.........|++.+.+..|+ +-...+.|.+.++
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD--~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~l 500 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSD--LSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT 500 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEE--TTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CCceEEEeecccCCeeEEee--ccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeC
Confidence 34577889988554444432 4667888888742110 112222222335567899998665554 4456788999998
Q ss_pred cCceEEEecccCCCCeeEEEecCCCCEEEEec-CC-Ccee-----------------eceEEEEEccCCceEEEe-cCCC
Q psy7433 85 RQRVIRSRFNAHESPVKCLAIDPHEEFFVTGA-GD-GDIK-----------------SPVKCLAIDPHEEFFVTG-AGDG 144 (213)
Q Consensus 85 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~~-~~i~-----------------~~v~~~~~~~~~~~l~~~-~~dg 144 (213)
........+.........|+++|....|.... .. +.|. ..+..|++++.+..|+.+ ...+
T Consensus 501 dG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~ 580 (791)
T 3m0c_C 501 KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH 580 (791)
T ss_dssp TSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred CCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCC
Confidence 76544333333445678999998654444433 22 3332 467889999776655555 4557
Q ss_pred cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCC
Q psy7433 145 DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 145 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 205 (213)
.|..+++........+...... ....+|++..+..+++-...+.|...+..++
T Consensus 581 ~I~~~d~dG~~~~~v~~~~~~l--------~~P~glav~~~~lYwtD~~~~~I~~~dk~tG 633 (791)
T 3m0c_C 581 SISSIDVNGGNRKTILEDEKRL--------AHPFSLAVFEDKVFWTDIINEAIFSANRLTG 633 (791)
T ss_dssp EEEEEETTSCSCEEEEECTTTT--------SSEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred cEEEEecCCCceEEEecCCCcc--------CCCCEEEEeCCEEEEEECCCCEEEEEeCCCC
Confidence 8888888543332222221110 2345566654433444445566766665444
|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.13 E-value=0.00015 Score=55.55 Aligned_cols=136 Identities=9% Similarity=0.103 Sum_probs=83.0
Q ss_pred CceEEEEEeC-CCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCC-C----cEEE
Q psy7433 8 KITSDFVFLG-SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKK-G----DICV 81 (213)
Q Consensus 8 ~~v~~~~~~~-~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~----~v~i 81 (213)
.....++++| ++..|..+ ...+.|+.+|++ .. .+..+.........++|++++++|+.+... + .+..
T Consensus 137 ~~P~~lavdp~~~g~Lyv~---d~~~~I~~id~~---~~-~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~ 209 (430)
T 3tc9_A 137 GGAVWLSFDPKNHNHLYLV---GEQHPTRLIDFE---KE-YVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYI 209 (430)
T ss_dssp SCCCEEEEETTEEEEEEEE---EBTEEEEEEETT---TT-EEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEE
T ss_pred CCCCEEEECCCCCCeEEEE---eCCCcEEEEECC---CC-EEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEE
Confidence 3567899998 34455554 233889999973 22 233333344567899999999966666542 1 2333
Q ss_pred EeccCceEE--EecccCCCCeeEEEecC-CCCEEEEecCCCcee------------------eceEEEEEccCCce-EEE
Q psy7433 82 IDLRQRVIR--SRFNAHESPVKCLAIDP-HEEFFVTGAGDGDIK------------------SPVKCLAIDPHEEF-FVT 139 (213)
Q Consensus 82 wd~~~~~~~--~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~i~------------------~~v~~~~~~~~~~~-l~~ 139 (213)
++. .+... ..+.. ......++++| ++..+++-..++.+. .....++|+|++++ +++
T Consensus 210 ~~~-~g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~ 287 (430)
T 3tc9_A 210 LTR-ESGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIV 287 (430)
T ss_dssp EEG-GGTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEE
T ss_pred EeC-CCceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEE
Confidence 443 33111 22221 23457788999 666665554555443 23667999999994 555
Q ss_pred ecCCCcEEEEEcc
Q psy7433 140 GAGDGDIKVWSLS 152 (213)
Q Consensus 140 ~~~dg~i~v~d~~ 152 (213)
-...+.|..++..
T Consensus 288 d~~~~~I~~~~~d 300 (430)
T 3tc9_A 288 VVNQHYILRSDYD 300 (430)
T ss_dssp ETTTTEEEEEEEE
T ss_pred ECCCCEEEEEeCC
Confidence 5567889998875
|
| >3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.12 E-value=0.0011 Score=54.58 Aligned_cols=180 Identities=12% Similarity=0.154 Sum_probs=108.5
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeee---eecCCceEEEEecCCCEEEEEcCCCcEEEEe
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV---CHDQGASSLVFAPQHQLLISAGKKGDICVID 83 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd 83 (213)
...|.++...+++.+.+.. .++-+..++.+ +.+ ...+. .....|.++...+++.+.+. +. +-|..+|
T Consensus 406 ~~~v~~i~~d~~g~lWigt----~~~Gl~~~~~~---~~~-~~~~~~~~~~~~~v~~i~~d~~g~lwig-t~-~Gl~~~~ 475 (781)
T 3v9f_A 406 SNSVLCSLKDSEGNLWFGT----YLGNISYYNTR---LKK-FQIIELEKNELLDVRVFYEDKNKKIWIG-TH-AGVFVID 475 (781)
T ss_dssp CSBEEEEEECTTSCEEEEE----TTEEEEEECSS---SCE-EEECCSTTTCCCCEEEEEECTTSEEEEE-ET-TEEEEEE
T ss_pred CcceEEEEECCCCCEEEEe----ccCCEEEEcCC---CCc-EEEeccCCCCCCeEEEEEECCCCCEEEE-EC-CceEEEe
Confidence 3568899888888877754 56678888863 222 22221 12356888888887765544 44 5688899
Q ss_pred ccCceEEEecccC-----CCCeeEEEecCCCCEEEEecCCCcee-------------------eceEEEEEccCCceEEE
Q psy7433 84 LRQRVIRSRFNAH-----ESPVKCLAIDPHEEFFVTGAGDGDIK-------------------SPVKCLAIDPHEEFFVT 139 (213)
Q Consensus 84 ~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~l~~~~~~~~i~-------------------~~v~~~~~~~~~~~l~~ 139 (213)
..+++........ ...|.++...+++...+.....|..+ ..|.++..+++|.+.++
T Consensus 476 ~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~ 555 (781)
T 3v9f_A 476 LASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLA 555 (781)
T ss_dssp SSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEE
T ss_pred CCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEE
Confidence 8776443222111 35688998888887655443344332 35778888888875554
Q ss_pred ecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCC
Q psy7433 140 GAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 140 ~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 205 (213)
. .+|.+..||.++.+. ..+...... ....|.++..++++.|..++.+| +..++..+.
T Consensus 556 T-~~Glv~~~d~~~~~~-~~~~~~~gl------~~~~i~~i~~d~~g~lW~~t~~G-l~~~~~~~~ 612 (781)
T 3v9f_A 556 T-GEGLVCFPSARNFDY-QVFQRKEGL------PNTHIRAISEDKNGNIWASTNTG-ISCYITSKK 612 (781)
T ss_dssp E-TTEEEEESCTTTCCC-EEECGGGTC------SCCCCCEEEECSSSCEEEECSSC-EEEEETTTT
T ss_pred E-CCCceEEECCCCCcE-EEccccCCC------CCceEEEEEECCCCCEEEEcCCc-eEEEECCCC
Confidence 4 466547888765542 222111100 01457788888777776666655 566665543
|
| >3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A* | Back alignment and structure |
|---|
Probab=98.12 E-value=0.0018 Score=51.92 Aligned_cols=185 Identities=14% Similarity=0.024 Sum_probs=105.1
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEE-EEcCCCcEEEEeccC
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLI-SAGKKGDICVIDLRQ 86 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~v~iwd~~~ 86 (213)
+.+.+++|++.+..|..+. ...+.|..++++. .......+.........+++.+.+..|+ +-...+.|.+.++..
T Consensus 40 ~~~~~ld~~~~~~~ly~sD--~~~~~I~r~~~~g--~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG 115 (619)
T 3s94_A 40 EDAAAVDFVFSHGLIYWSD--VSEEAIKRTEFNK--TESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDG 115 (619)
T ss_dssp SCEEEEEEETTTTEEEEEE--TTTTEEEEEEC-------CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CceEEEEEEeCCCEEEEEE--CCCCeEEEEEccC--CCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCC
Confidence 4577889998666555542 4567888888732 1111222222224678899998555454 445678899999876
Q ss_pred ceEEEecccCCCCeeEEEecCCCCEEEEecC--CCcee-----------------eceEEEEEccCCceEEEe-cCCCcE
Q psy7433 87 RVIRSRFNAHESPVKCLAIDPHEEFFVTGAG--DGDIK-----------------SPVKCLAIDPHEEFFVTG-AGDGDI 146 (213)
Q Consensus 87 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--~~~i~-----------------~~v~~~~~~~~~~~l~~~-~~dg~i 146 (213)
......+...-.....+++.|.+..|..... .+.|. ..+..++++++++.|..+ ...+.|
T Consensus 116 ~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I 195 (619)
T 3s94_A 116 SLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFI 195 (619)
T ss_dssp CSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCE
T ss_pred CCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeE
Confidence 5332233233445678999886444433332 22332 457889999876654444 456788
Q ss_pred EEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCc
Q psy7433 147 KVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 147 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~ 206 (213)
..+|+............. ....++++.++..+.+-...+.|...|..+++
T Consensus 196 ~~~~~dG~~~~~~~~~~~----------~~P~gi~~~~~~ly~td~~~~~V~~~d~~tg~ 245 (619)
T 3s94_A 196 HKSNLDGTNRQAVVKGSL----------PHPFALTLFEDILYWTDWSTHSILACNKYTGE 245 (619)
T ss_dssp EEESSSCCEEC-------------------CCCEEESSSEEEEECTTTCSEEEEESSSCC
T ss_pred EEecCCCCccEEEEeCCC----------CCceEEEEeCCEEEEecCCCCEEEEEECCCCc
Confidence 888886433322222111 22345666655445555566778888776554
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=98.11 E-value=5.6e-05 Score=61.94 Aligned_cols=136 Identities=9% Similarity=0.032 Sum_probs=80.9
Q ss_pred CceEEEEe-cCCCEEEEEcC-C----CcEEEEeccCc-eEEEe-cccCCCCeeEEEecCCCCEEEEecCCC-----cee-
Q psy7433 57 GASSLVFA-PQHQLLISAGK-K----GDICVIDLRQR-VIRSR-FNAHESPVKCLAIDPHEEFFVTGAGDG-----DIK- 122 (213)
Q Consensus 57 ~v~~~~~~-~~~~~l~~~~~-d----~~v~iwd~~~~-~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~~~-----~i~- 122 (213)
.+...+|| |||++|+.+.. + ..|+++|+.++ +.+.. +. .....++|+||++.|+....+. .+.
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 46788999 99998875432 2 35999999988 63211 11 1235788999998777665542 222
Q ss_pred -------------------eceEEEEEccCCceEEEecC---CCcEEEEEccCCe-ee--eeecCCCCceeEEEecCCCe
Q psy7433 123 -------------------SPVKCLAIDPHEEFFVTGAG---DGDIKVWSLSGNH-LL--YNFPGEHARSSFFKHIGQGV 177 (213)
Q Consensus 123 -------------------~~v~~~~~~~~~~~l~~~~~---dg~i~v~d~~~~~-~~--~~~~~~~~~~~~~~~~~~~v 177 (213)
.....+.|+|||++|+..+. ...|.++|+.++. .. ..+.... ....
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~---------~~~~ 322 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPRE---------KGVR 322 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCC---------TTCC
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCC---------CCce
Confidence 12356789999998776553 3468888887642 11 2222211 1345
Q ss_pred EEEEeCCCCeEEEEe-cC----CcEEEEeCCC
Q psy7433 178 TQLHVDGGSRLFSCG-AD----GSMKVRQLPD 204 (213)
Q Consensus 178 ~~~~~~~~~~l~s~~-~d----~~i~iw~~~~ 204 (213)
..+.|+.++.|+..+ .+ ..|..+++.+
T Consensus 323 ~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 323 YDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp EEEEEETTTEEEEEECTTTCTTCEEEEEETTS
T ss_pred EEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 666666566544333 32 2566666653
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.11 E-value=0.0014 Score=49.29 Aligned_cols=161 Identities=15% Similarity=0.128 Sum_probs=94.4
Q ss_pred CCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEE-cCCCcEEEEeccCceEEEecccCCCCeeEEEecCC
Q psy7433 30 ESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISA-GKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPH 108 (213)
Q Consensus 30 ~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~ 108 (213)
....|+..++. .... ..+.........++|++.+..|+.. ...+.|..+++........+.........+++.+.
T Consensus 94 ~~~~I~~i~~~---~~~~-~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~ 169 (386)
T 3v65_B 94 NRIDIRQVLPH---RSEY-TLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWV 169 (386)
T ss_dssp CBSCEEEECTT---SCCC-EEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETT
T ss_pred cCccceeeccC---CCcE-EEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeC
Confidence 45678888873 2222 2222234557899999865555544 45678999998766543333333334567888875
Q ss_pred CCE-EEEecCCCcee-----------------eceEEEEEccCCceEEEec-CC-CcEEEEEccCCeeeeeecCCCCcee
Q psy7433 109 EEF-FVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGA-GD-GDIKVWSLSGNHLLYNFPGEHARSS 168 (213)
Q Consensus 109 ~~~-l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~-~d-g~i~v~d~~~~~~~~~~~~~~~~~~ 168 (213)
+.. +++-...+.|. .....++++|.+..|.... .+ +.|..+++............
T Consensus 170 ~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~----- 244 (386)
T 3v65_B 170 HDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTH----- 244 (386)
T ss_dssp TTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSS-----
T ss_pred CCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECC-----
Confidence 443 33333333332 4578899998766554443 34 67888887533222222111
Q ss_pred EEEecCCCeEEEEeCC-CCeEE-EEecCCcEEEEeCCC
Q psy7433 169 FFKHIGQGVTQLHVDG-GSRLF-SCGADGSMKVRQLPD 204 (213)
Q Consensus 169 ~~~~~~~~v~~~~~~~-~~~l~-s~~~d~~i~iw~~~~ 204 (213)
....+.++++| +++|+ +-+..+.|..+++..
T Consensus 245 -----~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG 277 (386)
T 3v65_B 245 -----LFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG 277 (386)
T ss_dssp -----CSCEEEEEEEGGGTEEEEEETTTTEEEEECTTS
T ss_pred -----CCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 14578899986 45554 444567888888764
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=98.09 E-value=0.00017 Score=58.22 Aligned_cols=77 Identities=16% Similarity=0.143 Sum_probs=49.9
Q ss_pred eEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEc-CC-----CcEEEEe
Q psy7433 10 TSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG-KK-----GDICVID 83 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-----~~v~iwd 83 (213)
..++++.+++++++.||. .+..+.+||.... +...+..+... ..-.+++..+++++++.|+ .+ ..+.+||
T Consensus 245 ~~~~~~~~~g~lyv~GG~--~~~~v~~yd~~t~-~W~~~~~~~~~-R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd 320 (656)
T 1k3i_A 245 CPGISMDGNGQIVVTGGN--DAKKTSLYDSSSD-SWIPGPDMQVA-RGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYS 320 (656)
T ss_dssp SCEEEECTTSCEEEECSS--STTCEEEEEGGGT-EEEECCCCSSC-CSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEE
T ss_pred cccccCCCCCCEEEeCCC--CCCceEEecCcCC-ceeECCCCCcc-ccccceEEecCCeEEEEeCcccCCcccccceEeC
Confidence 334677789999999973 5568999997422 22222222211 1224556667899999888 34 4689999
Q ss_pred ccCceEE
Q psy7433 84 LRQRVIR 90 (213)
Q Consensus 84 ~~~~~~~ 90 (213)
..+.+..
T Consensus 321 ~~t~~W~ 327 (656)
T 1k3i_A 321 PSSKTWT 327 (656)
T ss_dssp TTTTEEE
T ss_pred CCCCcce
Confidence 9887543
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=98.09 E-value=0.00025 Score=56.28 Aligned_cols=56 Identities=14% Similarity=0.154 Sum_probs=39.0
Q ss_pred CCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEE-eCCCCeEEEEecCCcEEEEeCCCCccc
Q psy7433 142 GDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLH-VDGGSRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 142 ~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
.+|.|..||+.+++.+-++.... .+.+.. ...++.++.++.|+.++.+|..+++.+
T Consensus 442 ~~g~l~a~D~~tG~~~W~~~~~~-----------~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~l 498 (571)
T 2ad6_A 442 EMGQIRAFDLTTGKAKWTKWEKF-----------AAWGGTLYTKGGLVWYATLDGYLKALDNKDGKEL 498 (571)
T ss_dssp CCEEEEEECTTTCCEEEEEEESS-----------CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred CCCeEEEEECCCCCEEEEecCCC-----------CccceeEEECCCEEEEEcCCCeEEEEECCCCCEE
Confidence 45789999999888876665432 111111 123677888999999999999988654
|
| >2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis} | Back alignment and structure |
|---|
Probab=98.09 E-value=0.0002 Score=52.37 Aligned_cols=145 Identities=14% Similarity=0.124 Sum_probs=95.8
Q ss_pred ccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCccccccee-eeee----ec--CCceEEEE---ecCCCEEEEE
Q psy7433 4 QCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQ-AFVC----HD--QGASSLVF---APQHQLLISA 73 (213)
Q Consensus 4 ~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~-~~~~----~~--~~v~~~~~---~~~~~~l~~~ 73 (213)
+...-..-+++|.+....|..+. -..++|..|+.. ...... .+.. .+ ..+..+.| .|+++++++.
T Consensus 9 ~~~~~yPE~~~wd~~~g~~~vs~--l~~g~V~~~~~~---~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~ 83 (334)
T 2p9w_A 9 KVKNLTPEDTIYDRTRQVFYQSN--LYKGRIEVYNPK---TQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVM 83 (334)
T ss_dssp CCTTCCCSCEEEETTTTEEEEEE--TTTTEEEEECTT---TCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEE
T ss_pred cCcccCCcCccCcCCCCEEEEEe--ccCCEEEEEcCC---CCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEE
Confidence 33444556789988555444442 478999999973 222211 2221 01 13578999 6887776654
Q ss_pred c-------------CCCcEEEEecc---CceEEEecc--c-----------CCCCeeEEEecCCCCEEEEecCC-Ccee-
Q psy7433 74 G-------------KKGDICVIDLR---QRVIRSRFN--A-----------HESPVKCLAIDPHEEFFVTGAGD-GDIK- 122 (213)
Q Consensus 74 ~-------------~d~~v~iwd~~---~~~~~~~~~--~-----------~~~~i~~~~~~~~~~~l~~~~~~-~~i~- 122 (213)
. .+..|..||+. +++.+.... . .......++..++|+..++++.. +.|.
T Consensus 84 ~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~r 163 (334)
T 2p9w_A 84 KNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIAR 163 (334)
T ss_dssp EETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEE
T ss_pred cccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEE
Confidence 3 25779999998 776554332 1 11247899999999988877766 5543
Q ss_pred ---------------------eceEEEEEccCCceEEEecCCCcEEEEEccC
Q psy7433 123 ---------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSG 153 (213)
Q Consensus 123 ---------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~ 153 (213)
...+.|+++|+++.|++....|.+..+|++.
T Consensus 164 V~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 164 VSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp ECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred EeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 1245899999999888776699999999874
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=98.08 E-value=0.00027 Score=57.38 Aligned_cols=180 Identities=13% Similarity=0.163 Sum_probs=103.8
Q ss_pred CCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCC----------c-eEEEEecCCCEEEEEcCCCcEEEEeccCc
Q psy7433 19 CSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQG----------A-SSLVFAPQHQLLISAGKKGDICVIDLRQR 87 (213)
Q Consensus 19 ~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~----------v-~~~~~~~~~~~l~~~~~d~~v~iwd~~~~ 87 (213)
+..++.+ +.++.|..+|. .+++.+..+...... + ..+.. .+..++.++.|+.|..+|.++|
T Consensus 70 ~g~vyv~---~~~~~v~AlD~---~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG 141 (689)
T 1yiq_A 70 DGVMYTT---GPFSVVYALDA---RDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTG 141 (689)
T ss_dssp TTEEEEE---CGGGCEEEEET---TTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEE---cCCCeEEEEEC---CCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCC
Confidence 3345555 46889999998 566666655432110 0 11222 3567888889999999999999
Q ss_pred eEEEecccC--CCCeeEEEecC---CCCEEEEecC------CCcee-------------ec-------------------
Q psy7433 88 VIRSRFNAH--ESPVKCLAIDP---HEEFFVTGAG------DGDIK-------------SP------------------- 124 (213)
Q Consensus 88 ~~~~~~~~~--~~~i~~~~~~~---~~~~l~~~~~------~~~i~-------------~~------------------- 124 (213)
+.+-.+... ......+..+| ++. ++++.. ++.+. ..
T Consensus 142 ~~~W~~~~~~~~~~~~~~~~sP~v~~g~-v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~ 220 (689)
T 1yiq_A 142 QRAWSVDTRADHKRSYTITGAPRVVNGK-VVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAK 220 (689)
T ss_dssp CEEEEEECCSCTTSCCBCCSCCEEETTE-EEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHT
T ss_pred CEeeeecCcCCCCCCccccCCcEEECCE-EEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCccccccccccccccc
Confidence 887665432 11111111122 232 333221 23332 00
Q ss_pred ----------------eEEEEEccCCceEEEecCCCc-------------------EEEEEccCCeeeeeecCCCCceeE
Q psy7433 125 ----------------VKCLAIDPHEEFFVTGAGDGD-------------------IKVWSLSGNHLLYNFPGEHARSSF 169 (213)
Q Consensus 125 ----------------v~~~~~~~~~~~l~~~~~dg~-------------------i~v~d~~~~~~~~~~~~~~~~~~~ 169 (213)
...++++|+..+++.++.++. |..+|.++++.+-.++........
T Consensus 221 ~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd 300 (689)
T 1yiq_A 221 TWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWD 300 (689)
T ss_dssp TCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSC
T ss_pred ccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCccccc
Confidence 014678888888888887763 999999999998777642110000
Q ss_pred EEecCCCeEEEEeCCCC----eEEEEecCCcEEEEeCCCCccc
Q psy7433 170 FKHIGQGVTQLHVDGGS----RLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 170 ~~~~~~~v~~~~~~~~~----~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
+.. ..++.......++ .++.++.+|.++++|..+++.+
T Consensus 301 ~~~-~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 342 (689)
T 1yiq_A 301 YTA-TQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELL 342 (689)
T ss_dssp CCC-CSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred ccC-CCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEe
Confidence 000 0112111211122 5888999999999999998765
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=98.06 E-value=0.00065 Score=54.03 Aligned_cols=57 Identities=11% Similarity=0.186 Sum_probs=39.2
Q ss_pred CCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCccc
Q psy7433 142 GDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 142 ~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
.+|.|..||+.+++.+-+....... .+..+ ...++.++.++.|+.++.||.++++.+
T Consensus 464 ~~G~l~A~D~~tG~~~W~~~~~~~~------~~g~~----~tagglvf~g~~dg~l~A~D~~tG~~l 520 (582)
T 1flg_A 464 HVGSLRAMDPVSGKVVWEHKEHLPL------WAGVL----ATAGNLVFTGTGDGYFKAFDAKSGKEL 520 (582)
T ss_dssp CSEEEEEECTTTCCEEEEEEESSCC------CSCCE----EETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred CcceEEEEECCCCCEEEEecCCCCC------cccce----EeCCCEEEEECCCCcEEEEECCCCCEE
Confidence 3578999999998887665532210 00111 123678888999999999999998755
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=98.05 E-value=0.00037 Score=55.58 Aligned_cols=163 Identities=16% Similarity=0.165 Sum_probs=89.7
Q ss_pred ccEEEEeCCCcccccceeeeeeecCC---------ceEEEEe-cCC---CEEEEEcCCCcEEEEeccCceEEEecccCC-
Q psy7433 32 KNVCLWDSLLPQKKALVQAFVCHDQG---------ASSLVFA-PQH---QLLISAGKKGDICVIDLRQRVIRSRFNAHE- 97 (213)
Q Consensus 32 ~~i~iwd~~~~~~~~~~~~~~~~~~~---------v~~~~~~-~~~---~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~- 97 (213)
+.|..+|. .+++.+..++..... ..-+... .+| ..++.++.+|.+.++|.++++.+...+...
T Consensus 278 ~sv~Ald~---~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~ 354 (599)
T 1w6s_A 278 MTIFGRDA---DTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDT 354 (599)
T ss_dssp SEEEEEET---TTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTT
T ss_pred ceEEEEeC---CCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCC
Confidence 47888898 556666655532211 1112222 467 467778899999999999998876554211
Q ss_pred ------------CCe--------------------------eEEEecCCCCEEEEecCCCceeeceEEEEEccCCc-e--
Q psy7433 98 ------------SPV--------------------------KCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPHEE-F-- 136 (213)
Q Consensus 98 ------------~~i--------------------------~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~~~-~-- 136 (213)
.++ ..++++|+...+.+...+.........+.+. .+. +
T Consensus 355 ~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~-~g~~~~g 433 (599)
T 1w6s_A 355 VNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYK-AGQFFVG 433 (599)
T ss_dssp CCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCC-TTSCCCC
T ss_pred cccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeeccccccc-CCcceec
Confidence 111 2345666655555443221110000000000 111 1
Q ss_pred ----EEE--ec------CCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCC
Q psy7433 137 ----FVT--GA------GDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 137 ----l~~--~~------~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~ 204 (213)
+.. .+ ..|.|..||+.+++.+-..+... ..........++.++.++.|+.++.||..+
T Consensus 434 ~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~----------~~~~g~~~tagg~vf~gt~dg~l~A~D~~t 503 (599)
T 1w6s_A 434 ATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERF----------AVWGGTMATAGDLVFYGTLDGYLKARDSDT 503 (599)
T ss_dssp EEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESS----------CCCSBCEEETTTEEEEECTTSEEEEEETTT
T ss_pred ccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCC----------CccCcceEecCCEEEEECCCCeEEEEECCC
Confidence 111 01 35789999999988776664321 001111112367888899999999999999
Q ss_pred Cccc
Q psy7433 205 RDAV 208 (213)
Q Consensus 205 ~~~~ 208 (213)
++.+
T Consensus 504 G~~l 507 (599)
T 1w6s_A 504 GDLL 507 (599)
T ss_dssp CCEE
T ss_pred CCEE
Confidence 8754
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=98.02 E-value=0.0017 Score=47.13 Aligned_cols=175 Identities=9% Similarity=0.056 Sum_probs=97.1
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCC--CcEEEEecc
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKK--GDICVIDLR 85 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--~~v~iwd~~ 85 (213)
.....++|+++++++++- ..++.|..||.+ ......+. .......+++.++++++++.... ..|..+|..
T Consensus 32 ~~pegia~~~~g~lyv~d---~~~~~I~~~d~~----g~~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~ 103 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTN---HEVGEIVSITPD----GNQQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKS 103 (306)
T ss_dssp CCEEEEEECTTSCEEEEE---TTTTEEEEECTT----CCEEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECT
T ss_pred CCcceEEECCCCCEEEEe---CCCCeEEEECCC----CceEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCC
Confidence 456789999999977776 578899999863 22222222 23467889999999866554332 246667777
Q ss_pred CceEEEeccc-CCCCeeEEEecCCCCEEEEecCCCcee---------------------------eceEEEEEccCCceE
Q psy7433 86 QRVIRSRFNA-HESPVKCLAIDPHEEFFVTGAGDGDIK---------------------------SPVKCLAIDPHEEFF 137 (213)
Q Consensus 86 ~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~~~~i~---------------------------~~v~~~~~~~~~~~l 137 (213)
+++....... .......++..+.+..+++-..++.+. .....+ +|++++|
T Consensus 104 ~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~l 181 (306)
T 2p4o_A 104 DGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFL 181 (306)
T ss_dssp TSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEE
T ss_pred CCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEE
Confidence 7654322211 111223333333333232222233222 122334 7777654
Q ss_pred -EEecCCCcEEEEEccC-Cee--eeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEE-ecCCcEEEEeCC
Q psy7433 138 -VTGAGDGDIKVWSLSG-NHL--LYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSC-GADGSMKVRQLP 203 (213)
Q Consensus 138 -~~~~~dg~i~v~d~~~-~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~-~~d~~i~iw~~~ 203 (213)
++-...+.|..||+.. +.. ...+. . ......+++++++.|..+ ...+.|.+++..
T Consensus 182 yv~d~~~~~I~~~~~~~~g~~~~~~~~~----------~-~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~ 241 (306)
T 2p4o_A 182 YVSNTEKMLLLRIPVDSTDKPGEPEIFV----------E-QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD 241 (306)
T ss_dssp EEEETTTTEEEEEEBCTTSCBCCCEEEE----------E-SCCCSSEEEBTTCCEEEECBTTCCEEEECTT
T ss_pred EEEeCCCCEEEEEEeCCCCCCCccEEEe----------c-cCCCCCeEECCCCCEEEEeCCCCeEEEECCC
Confidence 4445678899999864 221 00000 0 123456788877665444 456788888865
|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=98.02 E-value=0.0024 Score=48.86 Aligned_cols=188 Identities=10% Similarity=0.081 Sum_probs=104.5
Q ss_pred CceEEEEEeCCCCeEEEeeccCCC----ccEEEEeCCCcccccceeeeeeecCCceEEEEec-CCCEEEEEcCCCcEEEE
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSES----KNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP-QHQLLISAGKKGDICVI 82 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~----~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~iw 82 (213)
.....++++++|+++++- ..+ ..+...+.. ........+. .......++++| ++.+.++-..++.|..+
T Consensus 182 ~~P~giavd~dG~lyVad---~~~~~~~~gv~~~~~~--~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~ 255 (433)
T 4hw6_A 182 GQCADVNFTLNGDMVVVD---DQSSDTNTGIYLFTRA--SGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSY 255 (433)
T ss_dssp SCEEEEEECTTCCEEEEE---CCSCTTSEEEEEECGG--GTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEE
T ss_pred CCccEEEECCCCCEEEEc---CCCCcccceEEEEECC--CCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEE
Confidence 457899999999955554 211 123333321 1111111222 334567789999 67666566677889999
Q ss_pred eccCceEEEec-cc-CCCCeeEEEecCCCCEEEEec-CCCcee------------------------------------e
Q psy7433 83 DLRQRVIRSRF-NA-HESPVKCLAIDPHEEFFVTGA-GDGDIK------------------------------------S 123 (213)
Q Consensus 83 d~~~~~~~~~~-~~-~~~~i~~~~~~~~~~~l~~~~-~~~~i~------------------------------------~ 123 (213)
|..++.....+ .. .......++++|+++.|..+. ..+.|. .
T Consensus 256 d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~ 335 (433)
T 4hw6_A 256 DPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLW 335 (433)
T ss_dssp CTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCS
T ss_pred ECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEc
Confidence 98877552222 11 122234699999998554443 333332 1
Q ss_pred ceEEEEE---------ccCCceEEEecCCCcEEEEEccCCeeeeeecCCCC---ce-eE----EEecCCCeEEEEeC-CC
Q psy7433 124 PVKCLAI---------DPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHA---RS-SF----FKHIGQGVTQLHVD-GG 185 (213)
Q Consensus 124 ~v~~~~~---------~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~---~~-~~----~~~~~~~v~~~~~~-~~ 185 (213)
....+++ .+++.++++-..++.|+.++. ++... ++.+... .. .. ....-.....++++ ++
T Consensus 336 ~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v~-t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~ 413 (433)
T 4hw6_A 336 GPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRVT-TYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKR 413 (433)
T ss_dssp SEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEEE-EEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTT
T ss_pred CCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCEE-EEEeCCCCCccccCCCccccccEeCCCcEEEEECCC
Confidence 2445788 667777777777788888884 44333 2222110 00 00 00011357889998 56
Q ss_pred CeEEEEe-cCCcEEEEeCC
Q psy7433 186 SRLFSCG-ADGSMKVRQLP 203 (213)
Q Consensus 186 ~~l~s~~-~d~~i~iw~~~ 203 (213)
+.|+.+. ..+.|+.+++.
T Consensus 414 g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 414 KCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp TEEEEEEGGGTEEEEEEEC
T ss_pred CEEEEEeCCCCEEEEEecC
Confidence 6655544 56678877754
|
| >3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A | Back alignment and structure |
|---|
Probab=97.99 E-value=0.0016 Score=49.23 Aligned_cols=109 Identities=11% Similarity=0.111 Sum_probs=75.7
Q ss_pred ceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccc---------cceeeeee------ecCCceEEEEec---CCCEE
Q psy7433 9 ITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKK---------ALVQAFVC------HDQGASSLVFAP---QHQLL 70 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~---------~~~~~~~~------~~~~v~~~~~~~---~~~~l 70 (213)
.|..+..+|+|++||..| +..|.|-.+..+... -..+.++- ...+|..+.|+| ++..|
T Consensus 67 ~i~qlvlSpsG~lLAl~g----~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~L 142 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFN----DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCI 142 (452)
T ss_dssp TTCEEEECTTSSEEEEEC----SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEE
T ss_pred ceeEEEECCCCCEEEEec----CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeE
Confidence 577899999999999994 678999888421100 11122321 246799999999 45678
Q ss_pred EEEcCCCcEEEEeccCc--eEEEec---------ccCCCCeeEEEecCCCCEEEEe--cCCCcee
Q psy7433 71 ISAGKKGDICVIDLRQR--VIRSRF---------NAHESPVKCLAIDPHEEFFVTG--AGDGDIK 122 (213)
Q Consensus 71 ~~~~~d~~v~iwd~~~~--~~~~~~---------~~~~~~i~~~~~~~~~~~l~~~--~~~~~i~ 122 (213)
++-..|+.|++||+... ++. .+ ......+.+++|.+++-.|... .+.|.|.
T Consensus 143 VVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIY 206 (452)
T 3pbp_A 143 VVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIF 206 (452)
T ss_dssp EEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEE
T ss_pred EEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEE
Confidence 88889999999999752 222 22 1223568899999988777774 4778775
|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.93 E-value=0.0022 Score=45.28 Aligned_cols=138 Identities=8% Similarity=0.101 Sum_probs=82.7
Q ss_pred ceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeee------eecCCceEEEEecCCCEEEEEcCCCcEEEE
Q psy7433 9 ITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV------CHDQGASSLVFAPQHQLLISAGKKGDICVI 82 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~d~~v~iw 82 (213)
..-.|++.+++.++++. -.++.+.++++........+.... ..+.....++|+|.++.|+++.......+|
T Consensus 71 D~EGIa~~~~g~~~vs~---E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~ 147 (255)
T 3qqz_A 71 DLETIEYIGDNQFVISD---ERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVY 147 (255)
T ss_dssp SEEEEEECSTTEEEEEE---TTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEE
T ss_pred ChHHeEEeCCCEEEEEE---CCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEE
Confidence 45577888888876665 467889998874322111122221 234557899999998888777766566666
Q ss_pred eccC---ceEEEec-------ccCCCCeeEEEecCCCCEEEEecC-CCcee-------------------------eceE
Q psy7433 83 DLRQ---RVIRSRF-------NAHESPVKCLAIDPHEEFFVTGAG-DGDIK-------------------------SPVK 126 (213)
Q Consensus 83 d~~~---~~~~~~~-------~~~~~~i~~~~~~~~~~~l~~~~~-~~~i~-------------------------~~v~ 126 (213)
.++. ...+..+ ......+..++++|....+++.+. .+.+. ....
T Consensus 148 ~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpE 227 (255)
T 3qqz_A 148 KVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAE 227 (255)
T ss_dssp EEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEE
T ss_pred EEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCC
Confidence 6541 1111111 112335789999996554444443 33332 3678
Q ss_pred EEEEccCCceEEEecCCCcEEEEE
Q psy7433 127 CLAIDPHEEFFVTGAGDGDIKVWS 150 (213)
Q Consensus 127 ~~~~~~~~~~l~~~~~dg~i~v~d 150 (213)
.|+|+++|+++++ ++.+.++.|.
T Consensus 228 Gia~d~~G~lyIv-sE~n~~y~f~ 250 (255)
T 3qqz_A 228 GVAMDASGNIYIV-SEPNRFYRFT 250 (255)
T ss_dssp EEEECTTCCEEEE-ETTTEEEEEE
T ss_pred eeEECCCCCEEEE-cCCceEEEEE
Confidence 8999999985444 6666666554
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=97.91 E-value=0.0029 Score=46.19 Aligned_cols=161 Identities=16% Similarity=0.127 Sum_probs=92.1
Q ss_pred CCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEE-cCCCcEEEEeccC----ceEEEecccCCCCeeEEE
Q psy7433 30 ESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISA-GKKGDICVIDLRQ----RVIRSRFNAHESPVKCLA 104 (213)
Q Consensus 30 ~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~v~iwd~~~----~~~~~~~~~~~~~i~~~~ 104 (213)
....|+..|+. .......+. .......++|++.++.|+.+ ..++.|..+++.. ......+.........++
T Consensus 8 ~~~~I~~i~~~---~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~gla 83 (316)
T 1ijq_A 8 NRHEVRKMTLD---RSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLA 83 (316)
T ss_dssp CBSSEEEEETT---SCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEE
T ss_pred CCCeEEEEECC---CcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEE
Confidence 45779999984 222222222 34567899999866555544 4568899999876 222222322223457888
Q ss_pred ecCCCC-EEEEecCCCcee-----------------eceEEEEEccCCceEEEecC-C-CcEEEEEccCCeeeeeecCCC
Q psy7433 105 IDPHEE-FFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAG-D-GDIKVWSLSGNHLLYNFPGEH 164 (213)
Q Consensus 105 ~~~~~~-~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~-d-g~i~v~d~~~~~~~~~~~~~~ 164 (213)
+++.+. .+++-...+.|. ..+..++++|.+..|..+.. . +.|..+++... ....+....
T Consensus 84 vd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~-~~~~~~~~~ 162 (316)
T 1ijq_A 84 VDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTEN 162 (316)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-CEEEEECSS
T ss_pred EeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC-CeEEEEECC
Confidence 886444 333433333332 45678899986665544443 2 67888877432 222221111
Q ss_pred CceeEEEecCCCeEEEEeCC-CCeEEEE-ecCCcEEEEeCCC
Q psy7433 165 ARSSFFKHIGQGVTQLHVDG-GSRLFSC-GADGSMKVRQLPD 204 (213)
Q Consensus 165 ~~~~~~~~~~~~v~~~~~~~-~~~l~s~-~~d~~i~iw~~~~ 204 (213)
......+++++ +++|+.+ +..+.|..+|+..
T Consensus 163 ---------~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg 195 (316)
T 1ijq_A 163 ---------IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 195 (316)
T ss_dssp ---------CSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred ---------CCCceEEEEeccCCEEEEEECCCCeEEEEecCC
Confidence 14678899997 4555444 4567888888864
|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=97.91 E-value=0.0022 Score=49.08 Aligned_cols=138 Identities=9% Similarity=0.065 Sum_probs=88.2
Q ss_pred CceEEEEecC--CCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCC-----cee-------
Q psy7433 57 GASSLVFAPQ--HQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDG-----DIK------- 122 (213)
Q Consensus 57 ~v~~~~~~~~--~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~-----~i~------- 122 (213)
....++|+|+ ...|+.+...+.|+.+|..+++...... .......++++++++.+++..... .+.
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~ 218 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-NIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGF 218 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC-CCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTT
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec-CCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCe
Confidence 3568999984 4456666555899999998877654433 445688999999999554443211 111
Q ss_pred ---------eceEEEEEcc-CCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EE-E
Q psy7433 123 ---------SPVKCLAIDP-HEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LF-S 190 (213)
Q Consensus 123 ---------~~v~~~~~~~-~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~-s 190 (213)
.....++++| ++.++++-..++.|+.+|..++.....+..... ...-..++++|++. |+ +
T Consensus 219 ~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~--------~~~~~~ia~dpdG~~LYva 290 (433)
T 4hw6_A 219 TERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDT--------KGSNFHIVWHPTGDWAYII 290 (433)
T ss_dssp CCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSC--------CSSCEEEEECTTSSEEEEE
T ss_pred eccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCC--------CCCcccEEEeCCCCEEEEE
Confidence 2346688898 666666666778899999876654222211110 02234699999653 54 4
Q ss_pred EecCCcEEEEeCC
Q psy7433 191 CGADGSMKVRQLP 203 (213)
Q Consensus 191 ~~~d~~i~iw~~~ 203 (213)
-...+.|+.+++.
T Consensus 291 d~~~~~I~~~~~d 303 (433)
T 4hw6_A 291 YNGKHCIYRVDYN 303 (433)
T ss_dssp ETTTTEEEEEEBC
T ss_pred eCCCCEEEEEeCC
Confidence 4456789988865
|
| >2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} | Back alignment and structure |
|---|
Probab=97.89 E-value=0.0034 Score=46.06 Aligned_cols=175 Identities=11% Similarity=0.061 Sum_probs=98.9
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEE-EEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEec--
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVC-LWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDL-- 84 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~-iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~-- 84 (213)
+.+..+.+.++++.++.+ .++.|. -.|- ..+...+. ......+..+.+.+++.+++.+...+..+-.|-
T Consensus 122 ~~~~~i~~~~~~~~~~~~----~~g~v~~S~Dg--G~tW~~~~--~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG 193 (327)
T 2xbg_A 122 GSPRLIKALGNGSAEMIT----NVGAIYRTKDS--GKNWQALV--QEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQ 193 (327)
T ss_dssp SCEEEEEEEETTEEEEEE----TTCCEEEESST--TSSEEEEE--CSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTC
T ss_pred CCeEEEEEECCCCEEEEe----CCccEEEEcCC--CCCCEEee--cCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCC
Confidence 457788887777777776 355442 2221 22222222 123456888999998887777654433434442
Q ss_pred cCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee---------------------eceEEEEEccCCceEEEecCC
Q psy7433 85 RQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK---------------------SPVKCLAIDPHEEFFVTGAGD 143 (213)
Q Consensus 85 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~---------------------~~v~~~~~~~~~~~l~~~~~d 143 (213)
.+.+.+. ......+..+.+.+++..++++. ++.+. ..+..+.+.+++.+++++. +
T Consensus 194 ~tW~~~~--~~~~~~~~~~~~~~~g~~~~~~~-~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~ 269 (327)
T 2xbg_A 194 TAWEPHN--RTTSRRLHNMGFTPDGRLWMIVN-GGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-A 269 (327)
T ss_dssp SSCEEEE--CCSSSCEEEEEECTTSCEEEEET-TTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-T
T ss_pred CceeECC--CCCCCccceeEECCCCCEEEEeC-CceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-C
Confidence 2334332 22345678888888877655442 22111 1367888888777666654 5
Q ss_pred CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeC
Q psy7433 144 GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQL 202 (213)
Q Consensus 144 g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~ 202 (213)
|.+ .+....++.-..+...... ...+..+.+.+++.+++++.+|.|.-++-
T Consensus 270 g~i-~~S~DgG~tW~~~~~~~~~-------~~~~~~v~~~~~~~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 270 GAL-LCSQDGGQTWQQDVDVKKV-------PSNFYKILFFSPDQGFILGQKGILLRYVT 320 (327)
T ss_dssp TCE-EEESSTTSSCEECGGGTTS-------SSCCCEEEEEETTEEEEECSTTEEEEECC
T ss_pred CeE-EEeCCCCcccEEcCccCCC-------CCCeEEEEEECCCceEEEcCCceEEEEcC
Confidence 655 3333334333322211000 03567788876777888889997776653
|
| >4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=0.0061 Score=48.95 Aligned_cols=183 Identities=13% Similarity=-0.026 Sum_probs=108.5
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEE-EEcCCCcEEEEeccC
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLI-SAGKKGDICVIDLRQ 86 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~v~iwd~~~ 86 (213)
+.+.+++|++.+..|..+. ..++.|..++++ .......+.........+++.+.+..|+ +-...+.|.+.++..
T Consensus 37 ~~~~~l~~d~~~~~lywtD--~~~~~I~r~~~~---g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG 111 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTD--ISLKTISRAFMN---GSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDG 111 (628)
T ss_dssp SCEEEEEEETTTTEEEEEE--TTTTEEEEEETT---SCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CceEEEEEECCCCEEEEEE--CCCCeEEEEECC---CCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCC
Confidence 4577899998665555442 467889988873 1112222222224567899987655554 445567899999875
Q ss_pred ceEEEecccCCCCeeEEEecCCCCEEEEecC--CCcee----------------eceEEEEEccCCceEEEe-cCCCcEE
Q psy7433 87 RVIRSRFNAHESPVKCLAIDPHEEFFVTGAG--DGDIK----------------SPVKCLAIDPHEEFFVTG-AGDGDIK 147 (213)
Q Consensus 87 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--~~~i~----------------~~v~~~~~~~~~~~l~~~-~~dg~i~ 147 (213)
......+...-.....+++.|....|..... .+.|. ..+..++++++++.|..+ ...+.|.
T Consensus 112 ~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~ 191 (628)
T 4a0p_A 112 QHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIE 191 (628)
T ss_dssp TTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEE
T ss_pred CcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEE
Confidence 4322222233455789999985444443331 23332 567889999976655555 4567899
Q ss_pred EEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCc
Q psy7433 148 VWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 148 v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~ 206 (213)
.+|+..... ..+... .....++++..+..+.+-...+.|...|..++.
T Consensus 192 ~~d~dG~~~-~v~~~~----------l~~P~glav~~~~ly~tD~~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 192 SSNMLGLNR-EVIADD----------LPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQ 239 (628)
T ss_dssp EEETTSCSC-EEEEEC----------CSCEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred EEcCCCCce-EEeecc----------CCCceEEEEECCEEEEecCCCCEEEEEECCCCC
Confidence 998854322 122111 134557777664445555557788888765543
|
| >3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A | Back alignment and structure |
|---|
Probab=97.86 E-value=0.0039 Score=46.01 Aligned_cols=172 Identities=10% Similarity=0.182 Sum_probs=102.0
Q ss_pred CCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec----CCC---EEEEEc-C--CCcEEEEecc--C
Q psy7433 19 CSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP----QHQ---LLISAG-K--KGDICVIDLR--Q 86 (213)
Q Consensus 19 ~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~---~l~~~~-~--d~~v~iwd~~--~ 86 (213)
..+++.. ...+-+.+||+ .++.+..+.. +.++.+..-| .++ ++++.. . +++|.+|++. +
T Consensus 40 ~s~ii~t---~k~~gL~Vydl----~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~ 110 (355)
T 3amr_A 40 NSKLITT---NKKSGLVVYSL----DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKN 110 (355)
T ss_dssp GCEEEEE---ETTTEEEEEET----TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTT
T ss_pred ccEEEEE---cCCCCEEEEcC----CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCC
Confidence 3445544 47789999997 5666666542 4455555544 232 223333 3 5789999773 3
Q ss_pred ceEEEeccc------CC-CCeeEEEe--cCC-CC-EEEEecCCCcee-----------------------eceEEEEEcc
Q psy7433 87 RVIRSRFNA------HE-SPVKCLAI--DPH-EE-FFVTGAGDGDIK-----------------------SPVKCLAIDP 132 (213)
Q Consensus 87 ~~~~~~~~~------~~-~~i~~~~~--~~~-~~-~l~~~~~~~~i~-----------------------~~v~~~~~~~ 132 (213)
++ +..+.. .. ..+..+++ +|. +. ++++...++.+. ..+..+..++
T Consensus 111 ~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd 189 (355)
T 3amr_A 111 GT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADD 189 (355)
T ss_dssp CC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEET
T ss_pred Cc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcC
Confidence 33 444421 11 45666777 664 43 455556666543 6677788888
Q ss_pred CCceEEEecCCCcEEEEEcc-----CCeeeeeecCCCCceeEEEecCCCeEEEEeC--CC--CeEEEEe-cCCcEEEEeC
Q psy7433 133 HEEFFVTGAGDGDIKVWSLS-----GNHLLYNFPGEHARSSFFKHIGQGVTQLHVD--GG--SRLFSCG-ADGSMKVRQL 202 (213)
Q Consensus 133 ~~~~l~~~~~dg~i~v~d~~-----~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~--~~l~s~~-~d~~i~iw~~ 202 (213)
....|..+-++.-|..+|.+ +.+.+..+..... ...+..+++. ++ ++|++.+ .++++.+||.
T Consensus 190 ~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l--------~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr 261 (355)
T 3amr_A 190 EYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHL--------TRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDR 261 (355)
T ss_dssp TTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSB--------CSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEES
T ss_pred CCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCcc--------ccCcceEEEEecCCCCEEEEEEcCCCCEEEEEEC
Confidence 88889999888666666654 2345544432211 1367888874 32 3555555 6779999999
Q ss_pred CCCccc
Q psy7433 203 PDRDAV 208 (213)
Q Consensus 203 ~~~~~~ 208 (213)
.....+
T Consensus 262 ~~~~~~ 267 (355)
T 3amr_A 262 QGKNKY 267 (355)
T ss_dssp STTCCE
T ss_pred CCCCcE
Confidence 743333
|
| >3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A | Back alignment and structure |
|---|
Probab=97.80 E-value=0.0056 Score=46.35 Aligned_cols=166 Identities=12% Similarity=0.139 Sum_probs=93.5
Q ss_pred EeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeee----cCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEE
Q psy7433 15 FLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCH----DQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIR 90 (213)
Q Consensus 15 ~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~ 90 (213)
...+|.-++.+ .++.||.-++.. ....+.+... ...+..+..+|+|++||..+. ..|.+-.+..+...
T Consensus 28 ~~~n~t~i~~a----~~n~iR~~~i~~---~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~ 99 (452)
T 3pbp_A 28 SSQNGTRIVFI----QDNIIRWYNVLT---DSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSN 99 (452)
T ss_dssp EETTTTEEEEE----ETTEEEEEETTT---CSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSC
T ss_pred EEcCCCEEEEE----ECCEEEEEECCC---CCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCcccc
Confidence 34456666655 567788778742 2233333322 236888999999999998865 58888888743211
Q ss_pred EecccCCCCee--EEEecCCCCEEEEecCCCceeeceEEEEEccC---CceEEEecCCCcEEEEEccCC--eeeeeecCC
Q psy7433 91 SRFNAHESPVK--CLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPH---EEFFVTGAGDGDIKVWSLSGN--HLLYNFPGE 163 (213)
Q Consensus 91 ~~~~~~~~~i~--~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~---~~~l~~~~~dg~i~v~d~~~~--~~~~~~~~~ 163 (213)
..-.....++. .....|. ......+|..+.|||- +..|++-..|+.|++||+... ++. .+...
T Consensus 100 ~~~~~~~~~~q~~ty~l~~~---------~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~ 169 (452)
T 3pbp_A 100 VEDVSIQDAFQIFHYSIDEE---------EVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKP 169 (452)
T ss_dssp CCCHHHHHTTEEEEEEGGGC---------C--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCC
T ss_pred CcccccccccceeEEEcCCc---------ccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhcc
Confidence 00000001122 2222221 1122467888889885 447889999999999999642 222 33211
Q ss_pred CCceeEEEecCCCeEEEEeCCCCe-EEE--EecCCcEEE
Q psy7433 164 HARSSFFKHIGQGVTQLHVDGGSR-LFS--CGADGSMKV 199 (213)
Q Consensus 164 ~~~~~~~~~~~~~v~~~~~~~~~~-l~s--~~~d~~i~i 199 (213)
.. .--.......|.+++|..++. |.. ...+|.|+-
T Consensus 170 ~~-~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 170 NN-SFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp CS-EEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEE
T ss_pred cc-ccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEE
Confidence 10 000111125788999988764 444 446676653
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=97.80 E-value=0.0046 Score=44.83 Aligned_cols=168 Identities=13% Similarity=0.053 Sum_probs=91.6
Q ss_pred CceEEEEEeCCCCeEEEeeccCCC-ccEEEEeCCCcccccceeeeee-ecCCceEEEEecCCCEEEEEcCCCcEEEEecc
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSES-KNVCLWDSLLPQKKALVQAFVC-HDQGASSLVFAPQHQLLISAGKKGDICVIDLR 85 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~-~~i~iwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~ 85 (213)
..+..+++.++|+++++.. ..+ ..|..++.. .++....... .......++..+++..+++-..++.|..+|..
T Consensus 72 ~~p~gia~~~dG~l~vad~--~~~~~~v~~~d~~---~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~ 146 (306)
T 2p4o_A 72 GKVSGLAFTSNGDLVATGW--NADSIPVVSLVKS---DGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVV 146 (306)
T ss_dssp SEEEEEEECTTSCEEEEEE--CTTSCEEEEEECT---TSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETT
T ss_pred CCceeEEEcCCCcEEEEec--cCCcceEEEEcCC---CCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCC
Confidence 4577899999999766652 122 246666652 2222111111 11222445555555445555467889999887
Q ss_pred CceE-EEec---------ccCCCCeeEEEecCCCCEEEEec-CCCcee-------------------eceEEEEEccCCc
Q psy7433 86 QRVI-RSRF---------NAHESPVKCLAIDPHEEFFVTGA-GDGDIK-------------------SPVKCLAIDPHEE 135 (213)
Q Consensus 86 ~~~~-~~~~---------~~~~~~i~~~~~~~~~~~l~~~~-~~~~i~-------------------~~v~~~~~~~~~~ 135 (213)
+++. +... ...-.....+ +|+++.+.++. ..+.+. .....++++++|+
T Consensus 147 ~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~ 224 (306)
T 2p4o_A 147 QPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGN 224 (306)
T ss_dssp TTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCC
T ss_pred CCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCC
Confidence 5421 1100 0111223445 67776554443 333332 2356688899998
Q ss_pred eEEEecCCCcEEEEEccCCeee--eeecCCCCceeEEEecCCCeEEEEeC---CC-CeEEEEec
Q psy7433 136 FFVTGAGDGDIKVWSLSGNHLL--YNFPGEHARSSFFKHIGQGVTQLHVD---GG-SRLFSCGA 193 (213)
Q Consensus 136 ~l~~~~~dg~i~v~d~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~---~~-~~l~s~~~ 193 (213)
++++....+.|.++|.. ++.. ..+.... ...++++|. |+ +.|+....
T Consensus 225 l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~----------~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 225 LYGATHIYNSVVRIAPD-RSTTIIAQAEQGV----------IGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp EEEECBTTCCEEEECTT-CCEEEEECGGGTC----------TTEEEEEECCSTTTTTEEEEEEC
T ss_pred EEEEeCCCCeEEEECCC-CCEEEEeeccccc----------CCceEEEEecccCCCCEEEEECC
Confidence 77777778899999875 4432 2232221 458899997 65 45554443
|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
Probab=97.79 E-value=0.0061 Score=46.11 Aligned_cols=162 Identities=14% Similarity=0.118 Sum_probs=94.0
Q ss_pred CCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEE-cCCCcEEEEeccCc----eEEEecccCCCCeeEEE
Q psy7433 30 ESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISA-GKKGDICVIDLRQR----VIRSRFNAHESPVKCLA 104 (213)
Q Consensus 30 ~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~v~iwd~~~~----~~~~~~~~~~~~i~~~~ 104 (213)
....|+..++. .... ..+......+..++|++....|+.. ...+.|..+++... .....+.........++
T Consensus 90 ~~~~I~~i~l~---~~~~-~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~gla 165 (400)
T 3p5b_L 90 NRHEVRKMTLD---RSEY-TSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLA 165 (400)
T ss_dssp ETTEEEEECTT---SCSC-EEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEE
T ss_pred ccceeEEEccC---Ccce-eEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEE
Confidence 35788888873 2222 2222344568899999866656555 45678888888652 22222332344567888
Q ss_pred ecCC-CCEEEEecCCCcee-----------------eceEEEEEccCCceEEEec--CCCcEEEEEccCCeeeeeecCCC
Q psy7433 105 IDPH-EEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGA--GDGDIKVWSLSGNHLLYNFPGEH 164 (213)
Q Consensus 105 ~~~~-~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~--~dg~i~v~d~~~~~~~~~~~~~~ 164 (213)
+.+. ++.+++-...+.|. ..+..++++|.+.+|.... ..+.|...++............-
T Consensus 166 vD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l 245 (400)
T 3p5b_L 166 VDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENI 245 (400)
T ss_dssp EETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSC
T ss_pred EEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCC
Confidence 8874 44444444444443 4477889998766555544 24678888875332222222111
Q ss_pred CceeEEEecCCCeEEEEeCC-CCeEEEE-ecCCcEEEEeCCCC
Q psy7433 165 ARSSFFKHIGQGVTQLHVDG-GSRLFSC-GADGSMKVRQLPDR 205 (213)
Q Consensus 165 ~~~~~~~~~~~~v~~~~~~~-~~~l~s~-~~d~~i~iw~~~~~ 205 (213)
.....+++++ +++|+.+ +..+.|..+|+...
T Consensus 246 ----------~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~ 278 (400)
T 3p5b_L 246 ----------QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 278 (400)
T ss_dssp ----------SCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred ----------CceEEEEEEeCCCEEEEEECCCCEEEEEeCCCC
Confidence 4578899986 4555444 45567888887643
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=97.74 E-value=0.0038 Score=50.35 Aligned_cols=104 Identities=12% Similarity=0.086 Sum_probs=64.9
Q ss_pred EEEEeC-CCCeEEEeeccCC--------CccEEEEeCCCcccccceeeeee-ecCCceEEEEecCCCEEEEEcC-CCcEE
Q psy7433 12 DFVFLG-SCSLVATAGHSSE--------SKNVCLWDSLLPQKKALVQAFVC-HDQGASSLVFAPQHQLLISAGK-KGDIC 80 (213)
Q Consensus 12 ~~~~~~-~~~~l~~~g~~s~--------~~~i~iwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~-d~~v~ 80 (213)
..++.| ++++++.+|.... ...+.+||..+. +...+..... +.....++++..++++++.|+. +..+.
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~-~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~ 268 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTG-IVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTS 268 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTC-CBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCC-cEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceE
Confidence 556777 8889998874111 016889998543 2333333322 2233446778889999999884 45799
Q ss_pred EEeccCceEEEecccCCC-CeeEEEecCCCCEEEEec
Q psy7433 81 VIDLRQRVIRSRFNAHES-PVKCLAIDPHEEFFVTGA 116 (213)
Q Consensus 81 iwd~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~ 116 (213)
+||..+.+....-..... .-.+++..++++.++.|+
T Consensus 269 ~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG 305 (656)
T 1k3i_A 269 LYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGG 305 (656)
T ss_dssp EEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECC
T ss_pred EecCcCCceeECCCCCccccccceEEecCCeEEEEeC
Confidence 999988754432221112 223456667899999988
|
| >2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} | Back alignment and structure |
|---|
Probab=97.67 E-value=0.0081 Score=44.06 Aligned_cols=174 Identities=10% Similarity=0.034 Sum_probs=95.2
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceee-eeeecCCceEEEEecCCCEEEEEcCCCcEEEEecc
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQA-FVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLR 85 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~ 85 (213)
...+.++.|.+++..++++ ..+.|. ...+...+.+.+.. .......+..+.|.+ +..++ ++..+.|.. ..+
T Consensus 35 ~~~~~~v~~~~~~~~~~~G----~~g~i~-~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~-~g~~g~i~~-S~D 106 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWLVG----VNATLM-ETRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWI-VGEPPIMLH-TTD 106 (327)
T ss_dssp SSCEEEEEESSSSCEEEEE----TTTEEE-EESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEE-EEETTEEEE-ESS
T ss_pred CCcEEEEEECCCCcEEEEc----CCCeEE-EeCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEE-EECCCeEEE-ECC
Confidence 4578999998888888865 466542 33221222233221 111234578888876 44444 455564433 222
Q ss_pred CceEEEecc---cCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCCCc
Q psy7433 86 QRVIRSRFN---AHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDGD 145 (213)
Q Consensus 86 ~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg~ 145 (213)
.++.-.... .....+..+.+.+++..++++. ++.+. ..+..+.+.|++++++++...+.
T Consensus 107 gG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~g~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~ 185 (327)
T 2xbg_A 107 GGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITN-VGAIYRTKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSF 185 (327)
T ss_dssp TTSSCEECCCCTTCSSCEEEEEEEETTEEEEEET-TCCEEEESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSE
T ss_pred CCCCceECccccCCCCCeEEEEEECCCCEEEEeC-CccEEEEcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcE
Confidence 232222221 1234567777776666665553 44442 35778899998887776654433
Q ss_pred EEEEEc--cCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEe
Q psy7433 146 IKVWSL--SGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQ 201 (213)
Q Consensus 146 i~v~d~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~ 201 (213)
.+-.|- .+-+.+. ... ...+..+.+.+++.+..++.+|.+++.+
T Consensus 186 ~~S~d~gG~tW~~~~---~~~---------~~~~~~~~~~~~g~~~~~~~~G~~~~s~ 231 (327)
T 2xbg_A 186 YSTWEPGQTAWEPHN---RTT---------SRRLHNMGFTPDGRLWMIVNGGKIAFSD 231 (327)
T ss_dssp EEEECTTCSSCEEEE---CCS---------SSCEEEEEECTTSCEEEEETTTEEEEEE
T ss_pred EEEeCCCCCceeECC---CCC---------CCccceeEECCCCCEEEEeCCceEEEec
Confidence 333332 1222221 111 1467888888877777777778777663
|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.62 E-value=0.02 Score=47.28 Aligned_cols=161 Identities=16% Similarity=0.127 Sum_probs=91.3
Q ss_pred CCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEE-EEcCCCcEEEEeccCc----eEEEecccCCCCeeEEE
Q psy7433 30 ESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLI-SAGKKGDICVIDLRQR----VIRSRFNAHESPVKCLA 104 (213)
Q Consensus 30 ~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~v~iwd~~~~----~~~~~~~~~~~~i~~~~ 104 (213)
....|+..++. .... ..+......+..++|++....|+ +-...+.|+.+++... .....+.........|+
T Consensus 402 n~~~Ir~i~l~---~~~~-~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLA 477 (791)
T 3m0c_C 402 NRHEVRKMTLD---RSEY-TSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLA 477 (791)
T ss_dssp CBSSEEEECTT---SCCC-EEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEE
T ss_pred cccceeEeecc---CCcc-eeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceee
Confidence 45678888873 2222 22223345678999998555554 4445678888888652 22223332344567888
Q ss_pred ecCCCCEE-EEecCCCcee-----------------eceEEEEEccCCceEEEec-C-CCcEEEEEccCCeeeeeecCCC
Q psy7433 105 IDPHEEFF-VTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGA-G-DGDIKVWSLSGNHLLYNFPGEH 164 (213)
Q Consensus 105 ~~~~~~~l-~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~-~-dg~i~v~d~~~~~~~~~~~~~~ 164 (213)
+.+.+..| ++-...+.|. ..+..|+++|.+.+|+... . .+.|.+.++........+...-
T Consensus 478 vD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l 557 (791)
T 3m0c_C 478 VDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENI 557 (791)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSC
T ss_pred eeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCC
Confidence 88766443 3333444443 4578899999766555554 2 3678888875433322222111
Q ss_pred CceeEEEecCCCeEEEEeCC-CCeEEEE-ecCCcEEEEeCCC
Q psy7433 165 ARSSFFKHIGQGVTQLHVDG-GSRLFSC-GADGSMKVRQLPD 204 (213)
Q Consensus 165 ~~~~~~~~~~~~v~~~~~~~-~~~l~s~-~~d~~i~iw~~~~ 204 (213)
.....|++++ +++|+.+ ...+.|...++..
T Consensus 558 ----------~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG 589 (791)
T 3m0c_C 558 ----------QWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 589 (791)
T ss_dssp ----------SCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred ----------CCceEEEEecCCCeEEEEeCCCCcEEEEecCC
Confidence 4577888885 4555444 3455777777754
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=97.55 E-value=0.0069 Score=49.06 Aligned_cols=174 Identities=13% Similarity=0.146 Sum_probs=97.8
Q ss_pred CCCccEEEEeCCCcccccceeeeeeecCC----------c-eEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCC
Q psy7433 29 SESKNVCLWDSLLPQKKALVQAFVCHDQG----------A-SSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHE 97 (213)
Q Consensus 29 s~~~~i~iwd~~~~~~~~~~~~~~~~~~~----------v-~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~ 97 (213)
+.++.|..+|. .+++.+..+...... + ..+.. .+..++.++.|+.|..+|.++++.+-.+....
T Consensus 73 ~~~~~v~AlD~---~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~ 147 (668)
T 1kv9_A 73 MSWSRVIAVDA---ASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQQTTD 147 (668)
T ss_dssp EGGGEEEEEET---TTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEEECSC
T ss_pred CCCCeEEEEEC---CCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeeeeccCC
Confidence 36788999998 456665554322110 0 11222 34578888889999999999998876664321
Q ss_pred C-CeeEEEecC--CCCEEEEecC------CCcee-------------ec-------------------------------
Q psy7433 98 S-PVKCLAIDP--HEEFFVTGAG------DGDIK-------------SP------------------------------- 124 (213)
Q Consensus 98 ~-~i~~~~~~~--~~~~l~~~~~------~~~i~-------------~~------------------------------- 124 (213)
. ....+...| .+..++++.. ++.+. ..
T Consensus 148 ~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~ 227 (668)
T 1kv9_A 148 PAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGG 227 (668)
T ss_dssp TTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCE
T ss_pred CCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCC
Confidence 0 000111111 1223333322 13232 00
Q ss_pred ----eEEEEEccCCceEEEecCCC-------------------cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEE
Q psy7433 125 ----VKCLAIDPHEEFFVTGAGDG-------------------DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLH 181 (213)
Q Consensus 125 ----v~~~~~~~~~~~l~~~~~dg-------------------~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 181 (213)
...++++|+..+++.++.++ .|..+|.++++.+-.++......-.+. ...+.....
T Consensus 228 gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~-~~~~~~~~d 306 (668)
T 1kv9_A 228 GGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFT-ATQQITLAE 306 (668)
T ss_dssp ECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCC-CCSCEEEEE
T ss_pred CCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCcccccc-CCCCcEEEE
Confidence 01367888778888887765 389999999998877765311000000 001222222
Q ss_pred eCCCC----eEEEEecCCcEEEEeCCCCccc
Q psy7433 182 VDGGS----RLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 182 ~~~~~----~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
...++ .++.++.+|.++++|..+++.+
T Consensus 307 ~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 337 (668)
T 1kv9_A 307 LNIDGKPRKVLMQAPKNGFFYVLDRTNGKLI 337 (668)
T ss_dssp EEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred eccCCcEEEEEEEECCCCEEEEEECCCCCEe
Confidence 22233 4888899999999999988654
|
| >4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* | Back alignment and structure |
|---|
Probab=97.50 E-value=0.026 Score=45.38 Aligned_cols=184 Identities=12% Similarity=0.035 Sum_probs=107.4
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeee------ecCCceEEEEecCCCEEE-EEcCCCcEE
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVC------HDQGASSLVFAPQHQLLI-SAGKKGDIC 80 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~-~~~~d~~v~ 80 (213)
+.+.+++|.+.+..|..+- ...+.|+.++.+. ......+.. ....+..+++...++.|+ +-+..+.|.
T Consensus 340 ~~~~~ld~d~~~~~iy~sD--~~~~~I~r~~~~g---~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~ 414 (628)
T 4a0p_A 340 RNVRAIDYDPLDKQLYWID--SRQNMIRKAQEDG---SQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVIN 414 (628)
T ss_dssp SCEEEEEEETTTTEEEEEE--TTTTEEEEEETTS---CSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCceEEEEecCCCeEEEEe--cCcceEEEEEcCC---CCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEE
Confidence 4578899998666555552 4567888888631 111111211 233578999998766554 555678899
Q ss_pred EEeccCceEEEecccCCCCeeEEEecC-CCCEEEEec-----------CCCcee--------eceEEEEEccCCceEEEe
Q psy7433 81 VIDLRQRVIRSRFNAHESPVKCLAIDP-HEEFFVTGA-----------GDGDIK--------SPVKCLAIDPHEEFFVTG 140 (213)
Q Consensus 81 iwd~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~-----------~~~~i~--------~~v~~~~~~~~~~~l~~~ 140 (213)
+.+++.......+.........+++.| .+..+.+-. .||..+ ..++.++++++++.|..+
T Consensus 415 v~~~~G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~~~l~~~~l~~P~gla~D~~~~~LYw~ 494 (628)
T 4a0p_A 415 VTRLDGRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTEREVLFFSGLSKPIALALDSRLGKLFWA 494 (628)
T ss_dssp EEETTSCEEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEE
T ss_pred EEECCCCeEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCcEEEEeccCCCccEEEEeCCCCEEEEE
Confidence 998864322222233445688999999 454444422 222211 467889999987666655
Q ss_pred c-CCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCc
Q psy7433 141 A-GDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 141 ~-~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~ 206 (213)
. ..+.|..+|+... ....+.... .....+++...+..+.+-.....|...|..+++
T Consensus 495 D~~~~~I~~~~~dG~-~r~~~~~~~---------~~~P~glav~~~~ly~tD~~~~~i~~~~k~~G~ 551 (628)
T 4a0p_A 495 DSDLRRIESSDLSGA-NRIVLEDSN---------ILQPVGLTVFENWLYWIDKQQQMIEKIDMTGRE 551 (628)
T ss_dssp ETTTTEEEEEETTSC-SCEEEECSS---------CSCEEEEEEETTEEEEEETTTTEEEEEETTSSS
T ss_pred eCCCCEEEEEeCCCC-ceEEEEcCC---------CCCcEEEEEECCEEEEEECCCCeEEEEECcCCC
Confidence 4 4578988988432 222232111 134566776654444555555677777766543
|
| >2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.43 E-value=0.02 Score=42.50 Aligned_cols=102 Identities=10% Similarity=0.158 Sum_probs=62.7
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeee---eecCCceEEEEecC---CCEEEEEcC-C----
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV---CHDQGASSLVFAPQ---HQLLISAGK-K---- 76 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~---~~~~~v~~~~~~~~---~~~l~~~~~-d---- 76 (213)
.....++|.|+|+++++- .++.|.+++ . .+...+..+. ........++|+|+ +..|+.+.. .
T Consensus 31 ~~P~~ia~~pdG~l~V~e----~~g~I~~i~-~--g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~ 103 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIAE----RPGRIRLFR-E--GRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGL 103 (352)
T ss_dssp SCEEEEEECTTSCEEEEE----TTTEEEEEE-T--TEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSS
T ss_pred CCceEEEEcCCCeEEEEe----CCCeEEEEE-C--CCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCC
Confidence 457799999999987776 569999998 2 2222222221 12346789999998 555554433 2
Q ss_pred -CcEEEEeccCc-----eE-EEecc---cCCCCeeEEEecCCCCEEEEec
Q psy7433 77 -GDICVIDLRQR-----VI-RSRFN---AHESPVKCLAIDPHEEFFVTGA 116 (213)
Q Consensus 77 -~~v~iwd~~~~-----~~-~~~~~---~~~~~i~~~~~~~~~~~l~~~~ 116 (213)
..|..++...+ +. +..+. ........++|.|++..+++.+
T Consensus 104 ~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 104 RNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred ccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 56777877643 11 12233 1112346899999997666643
|
| >3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A* | Back alignment and structure |
|---|
Probab=97.40 E-value=0.035 Score=44.57 Aligned_cols=141 Identities=13% Similarity=0.045 Sum_probs=84.3
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCC-EEEEEcCCCcEEEEeccC
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQ-LLISAGKKGDICVIDLRQ 86 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~iwd~~~ 86 (213)
..+.+++|.+.+..|..+. ...+.|..++.+. ......+.........+++.+.+. +.++-...+.|.+.++..
T Consensus 349 ~~~~~ld~d~~~~~ly~sD--~~~~~I~r~~~~g---~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G 423 (619)
T 3s94_A 349 RHAIAIDYDPVEGYIYWTD--DEVRAIRRSFIDG---SGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNG 423 (619)
T ss_dssp SSEEEEEEETTTTEEEEEE--TTTTEEEEEETTS---CSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CccEEEEEEcCCCeEEEEe--CCCCeEEEEEcCC---CccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCC
Confidence 3467889998554444442 4678888888732 112222222234577899987444 444545678899998875
Q ss_pred ceEEEecccCCCCeeEEEecCC-CCEEEEecC-CCcee-----------------eceEEEEEccCCceEEEe-cCCCcE
Q psy7433 87 RVIRSRFNAHESPVKCLAIDPH-EEFFVTGAG-DGDIK-----------------SPVKCLAIDPHEEFFVTG-AGDGDI 146 (213)
Q Consensus 87 ~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~-~~~i~-----------------~~v~~~~~~~~~~~l~~~-~~dg~i 146 (213)
......+...-.....+++.|. +..+++-.. ...|. ..+..++++++++.|..+ +..+.|
T Consensus 424 ~~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I 503 (619)
T 3s94_A 424 TMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKI 503 (619)
T ss_dssp CSCEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CeEEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeCCCCCCeeeEEcccCCEEEEEECCCCEE
Confidence 5332222333456789999986 444443211 12222 467889999866655555 455778
Q ss_pred EEEEccC
Q psy7433 147 KVWSLSG 153 (213)
Q Consensus 147 ~v~d~~~ 153 (213)
..+++..
T Consensus 504 ~~~~~dG 510 (619)
T 3s94_A 504 EVMNTDG 510 (619)
T ss_dssp EEEESSS
T ss_pred EEEecCC
Confidence 8888753
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
Probab=97.38 E-value=0.0017 Score=52.88 Aligned_cols=145 Identities=12% Similarity=-0.037 Sum_probs=82.5
Q ss_pred eEEEEEeCC-CCeEEEeeccCCCccEEEEeCCCcccccceeee-eeecCCceEEEEecCCCEEEEEcC--CCcEEEEecc
Q psy7433 10 TSDFVFLGS-CSLVATAGHSSESKNVCLWDSLLPQKKALVQAF-VCHDQGASSLVFAPQHQLLISAGK--KGDICVIDLR 85 (213)
Q Consensus 10 v~~~~~~~~-~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~--d~~v~iwd~~ 85 (213)
...|++.+. ++++++- ...+.|.+.++. +.....+ .........++++|.+.+|+.... .+.|..+++.
T Consensus 455 P~glavD~~~g~LY~tD---~~~~~I~v~d~d----g~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~d 527 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTD---SVLGTVSVADTK----GVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 527 (699)
T ss_dssp CCCEECCCSSSBCEECC---TTTSCEEEEBSS----SCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSS
T ss_pred cceEEEEeeCCcEEEEe---ccCCeEEEEecC----CCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCC
Confidence 456777754 4444443 457889999873 2222222 222244678899997666665543 2677777765
Q ss_pred CceEEEecccCCCCeeEEEecCCCCEEEEe-cCCCcee-------------------eceEEEEEccCCceEEEecCCCc
Q psy7433 86 QRVIRSRFNAHESPVKCLAIDPHEEFFVTG-AGDGDIK-------------------SPVKCLAIDPHEEFFVTGAGDGD 145 (213)
Q Consensus 86 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~~~~i~-------------------~~v~~~~~~~~~~~l~~~~~dg~ 145 (213)
.......+.........|+++|++..|..+ ...+.|. .....|++..+ .++++....+.
T Consensus 528 G~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~ 606 (699)
T 1n7d_A 528 GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEA 606 (699)
T ss_dssp SCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTC
T ss_pred CCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCe
Confidence 432222222223456789999875544443 3344443 12234455433 45555566788
Q ss_pred EEEEEccCCeeeeeecC
Q psy7433 146 IKVWSLSGNHLLYNFPG 162 (213)
Q Consensus 146 i~v~d~~~~~~~~~~~~ 162 (213)
|..+|..+++.+..+..
T Consensus 607 V~~~d~~~G~~~~~i~~ 623 (699)
T 1n7d_A 607 IFSANRLTGSDVNLLAE 623 (699)
T ss_dssp EEEEETTTEEEEECCCT
T ss_pred EEEEEccCCCceEEeec
Confidence 99999877777766643
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=97.37 E-value=0.0086 Score=47.56 Aligned_cols=32 Identities=19% Similarity=0.181 Sum_probs=26.4
Q ss_pred CCceEEEecCCCcEEEEEccCCeeeeeecCCC
Q psy7433 133 HEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEH 164 (213)
Q Consensus 133 ~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~ 164 (213)
.+..++.++.||.++.+|.++++.+.++....
T Consensus 474 ~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~ 505 (571)
T 2ad6_A 474 KGGLVWYATLDGYLKALDNKDGKELWNFKMPS 505 (571)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred CCCEEEEEcCCCeEEEEECCCCCEEEEEeCCC
Confidence 35567778999999999999999998887643
|
| >1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A* | Back alignment and structure |
|---|
Probab=97.37 E-value=0.0064 Score=41.82 Aligned_cols=103 Identities=11% Similarity=0.016 Sum_probs=61.0
Q ss_pred ceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccc---cceeeee--eecCCceEEEEecCCCEEEEEcCCCcEEEEe
Q psy7433 9 ITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKK---ALVQAFV--CHDQGASSLVFAPQHQLLISAGKKGDICVID 83 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~---~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd 83 (213)
.+.+++|+|+|.+.+.. +|.+.-.+..+.... .....+- +-. ...++.|.|+|.+.++ .||.|.-++
T Consensus 42 ~~~~laf~P~G~LYaV~-----~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~-~F~a~~fD~~G~LYav--~dG~iyr~~ 113 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGVL-----NDKIYKGTPPTHDNDNWMGRAKKIGNGGWN-QFQFLFFDPNGYLYAV--SKDKLYKAS 113 (236)
T ss_dssp TCSEEEECTTSCEEEEE-----TTEEEEESCCCSTTCCHHHHCEEEECSCGG-GCSEEEECTTSCEEEE--ETTEEEEES
T ss_pred cceeEEECCCccEEEEe-----CCeEEEECCCCCCcccccccccEecccccc-cceEEEECCCCCEEEe--CCCEEEEeC
Confidence 57799999999977774 565554443211000 1111110 111 2588999999987777 568888777
Q ss_pred ccCceE-------EEecccCCCCeeEEEecCCCCEEEEecCCCce
Q psy7433 84 LRQRVI-------RSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI 121 (213)
Q Consensus 84 ~~~~~~-------~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i 121 (213)
-.+... ...-...=..+..+.+.|+|.+.++. ++.+
T Consensus 114 pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~l 156 (236)
T 1tl2_A 114 PPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQF 156 (236)
T ss_dssp CCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEE
T ss_pred CCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcE
Confidence 533110 00001111357899999999988877 6655
|
| >3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B | Back alignment and structure |
|---|
Probab=97.29 E-value=0.028 Score=41.12 Aligned_cols=145 Identities=11% Similarity=-0.042 Sum_probs=85.0
Q ss_pred ceEEEEEeCCCC-eEEEeeccCCCccEEEEeCCCcccccceeee-eeecCCceEEEEecCCCEEEEEcC--CCcEEEEec
Q psy7433 9 ITSDFVFLGSCS-LVATAGHSSESKNVCLWDSLLPQKKALVQAF-VCHDQGASSLVFAPQHQLLISAGK--KGDICVIDL 84 (213)
Q Consensus 9 ~v~~~~~~~~~~-~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~--d~~v~iwd~ 84 (213)
....+++.+.+. ++++- ...+.|.+++++ +.....+ .........+++.|.+..|+.... .+.|...++
T Consensus 80 ~p~glavd~~~g~ly~~d---~~~~~I~~~~~d----G~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~ 152 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTD---SETNRIEVSNLD----GSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGM 152 (318)
T ss_dssp CCCEEEEETTTTEEEEEE---TTTTEEEEEETT----SCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEET
T ss_pred CccEEEEEcCCCeEEEEE---CCCCEEEEEECC----CCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEc
Confidence 455688887444 44444 467789999873 2222222 223345689999997666666552 567888887
Q ss_pred cCceEEEecccCCCCeeEEEecCCCCEEEEec-CCCcee-----------------eceEEEEEccCCceEEEecCCCcE
Q psy7433 85 RQRVIRSRFNAHESPVKCLAIDPHEEFFVTGA-GDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDGDI 146 (213)
Q Consensus 85 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg~i 146 (213)
............-.....++++|++..|..+. ..+.|. ..+..+++.. +.++.+-...+.|
T Consensus 153 dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V 231 (318)
T 3sov_A 153 DGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHSI 231 (318)
T ss_dssp TSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEET-TEEEEEETTTTEE
T ss_pred CCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeC-CEEEEEecCCCeE
Confidence 64332222222334568999998666555443 333332 3445566653 3455555567788
Q ss_pred EEEEccCCeeeeeec
Q psy7433 147 KVWSLSGNHLLYNFP 161 (213)
Q Consensus 147 ~v~d~~~~~~~~~~~ 161 (213)
..+|..+++....+.
T Consensus 232 ~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 232 LACNKYTGEGLREIH 246 (318)
T ss_dssp EEEETTTCCSCEEEE
T ss_pred EEEECCCCCceEEEe
Confidence 888886666544443
|
| >1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A* | Back alignment and structure |
|---|
Probab=97.25 E-value=0.01 Score=40.83 Aligned_cols=86 Identities=13% Similarity=0.137 Sum_probs=57.0
Q ss_pred CCceEEEEecCCCEEEEEcCCCcEEEEeccCceE------EEecc-cCCCCeeEEEecCCCCEEEEecCCCcee------
Q psy7433 56 QGASSLVFAPQHQLLISAGKKGDICVIDLRQRVI------RSRFN-AHESPVKCLAIDPHEEFFVTGAGDGDIK------ 122 (213)
Q Consensus 56 ~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~------~~~~~-~~~~~i~~~~~~~~~~~l~~~~~~~~i~------ 122 (213)
..+..++|+|++.+.++ .+|.+.-.+..+... -..+- ..-....++.|.|++.+.++ .|+.+.
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 46889999998875555 677776666544211 01110 00111478999999988777 457774
Q ss_pred ------------------eceEEEEEccCCceEEEecCCCcEE
Q psy7433 123 ------------------SPVKCLAIDPHEEFFVTGAGDGDIK 147 (213)
Q Consensus 123 ------------------~~v~~~~~~~~~~~l~~~~~dg~i~ 147 (213)
..+..+.+.|+|.+.++. |+.++
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~ly 157 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFY 157 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEE
Confidence 467899999999877766 67643
|
| >3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A | Back alignment and structure |
|---|
Probab=97.24 E-value=0.034 Score=41.13 Aligned_cols=128 Identities=13% Similarity=0.239 Sum_probs=83.0
Q ss_pred CccEEEEeCCCcccccceeeeee------ec-CCceEEEE--ecC-CC-EEEEEcCCCcEEEEecc-------CceEEEe
Q psy7433 31 SKNVCLWDSLLPQKKALVQAFVC------HD-QGASSLVF--APQ-HQ-LLISAGKKGDICVIDLR-------QRVIRSR 92 (213)
Q Consensus 31 ~~~i~iwd~~~~~~~~~~~~~~~------~~-~~v~~~~~--~~~-~~-~l~~~~~d~~v~iwd~~-------~~~~~~~ 92 (213)
+++|.+|++.. ....+..+.. .. ..+..+++ +|. +. +++....+|.+..|++. +.+.++.
T Consensus 98 ~n~l~vf~iDp--~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~ 175 (355)
T 3amr_A 98 KNTIEIYAIDG--KNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRA 175 (355)
T ss_dssp CCEEEEEEECT--TTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEE
T ss_pred CCeEEEEEECC--CCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEE
Confidence 68899997631 1112333311 11 45667777 664 43 68888889999999983 3466677
Q ss_pred cccCCCCeeEEEecCCCCEEEEecCCCcee------------------------eceEEEEE--ccCCc-eEEEec-CCC
Q psy7433 93 FNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------------SPVKCLAI--DPHEE-FFVTGA-GDG 144 (213)
Q Consensus 93 ~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------------~~v~~~~~--~~~~~-~l~~~~-~dg 144 (213)
+.. .+.+..+...+....|.++-++.-|. ..+..|++ .++++ +|++++ .++
T Consensus 176 f~l-gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~ 254 (355)
T 3amr_A 176 FKM-NSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNS 254 (355)
T ss_dssp EEC-SSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGT
T ss_pred ecC-CCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCC
Confidence 663 45677788887777777776654442 46777777 45555 666666 567
Q ss_pred cEEEEEcc-CCeeeeeec
Q psy7433 145 DIKVWSLS-GNHLLYNFP 161 (213)
Q Consensus 145 ~i~v~d~~-~~~~~~~~~ 161 (213)
...+||.+ +.+.+..+.
T Consensus 255 s~~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 255 SYAIYDRQGKNKYVADFR 272 (355)
T ss_dssp EEEEEESSTTCCEEEEEE
T ss_pred EEEEEECCCCCcEEEEEE
Confidence 99999996 555565553
|
| >3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.21 E-value=0.025 Score=43.98 Aligned_cols=158 Identities=12% Similarity=0.120 Sum_probs=86.4
Q ss_pred ceEEEEEeCC--CCeEEEeeccCCCccEEEEeCCCcccccceeeeeee----cCCceEEEE-------ecCCCEEEEEcC
Q psy7433 9 ITSDFVFLGS--CSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCH----DQGASSLVF-------APQHQLLISAGK 75 (213)
Q Consensus 9 ~v~~~~~~~~--~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~----~~~v~~~~~-------~~~~~~l~~~~~ 75 (213)
....|+|.|. ++++++- ...+.|++.|.+ .. .+..+... ......++| +++++.|+.+..
T Consensus 140 ~p~~la~dp~~~~~Lyv~~---~~~~~i~~ID~~---~~-~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~ 212 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICY---DGHKAIQLIDLK---NR-MLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAID 212 (496)
T ss_dssp SEEEEEEETTEEEEEEEEE---ETEEEEEEEETT---TT-EEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEEC
T ss_pred CCCEEEEccCCCCEEEEEE---CCCCeEEEEECC---CC-EEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeC
Confidence 4678999983 4455554 345678888873 32 23332211 224789999 999987776655
Q ss_pred CC-c------EEEEeccC-ceEEEecccCCCCeeEEEecCCCCEEEEecCCCceeeceEEEEEccC-CceEEEecCCCcE
Q psy7433 76 KG-D------ICVIDLRQ-RVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPH-EEFFVTGAGDGDI 146 (213)
Q Consensus 76 d~-~------v~iwd~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~-~~~l~~~~~dg~i 146 (213)
.+ . |.+++... +.. .. .++...+.. ......++++|+ +.++++-..++.|
T Consensus 213 ~~~~~~~~~~V~~i~r~~~G~~----~~----------~~~~~~v~~-------~~~p~giavdp~~g~LYvtd~~~g~V 271 (496)
T 3kya_A 213 YDGKGDESPSVYIIKRNADGTF----DD----------RSDIQLIAA-------YKQCNGATIHPINGELYFNSYEKGQV 271 (496)
T ss_dssp CCTTGGGEEEEEEEECCTTSCC----ST----------TSCEEEEEE-------ESCCCCEEECTTTCCEEEEETTTTEE
T ss_pred CCCCcccCceEEEEecCCCCce----ee----------cccceeecc-------CCCceEEEEcCCCCeEEEEECCCCEE
Confidence 43 2 44444222 110 00 000011110 123456777884 4455566677889
Q ss_pred EEEEcc-------CCee-----------eee-ecCCCCceeEEEecCCCeEEEEeCCCCe-E-EEEecCCcEEEEeCC
Q psy7433 147 KVWSLS-------GNHL-----------LYN-FPGEHARSSFFKHIGQGVTQLHVDGGSR-L-FSCGADGSMKVRQLP 203 (213)
Q Consensus 147 ~v~d~~-------~~~~-----------~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l-~s~~~d~~i~iw~~~ 203 (213)
..+|+. ++.. ... +.... ......++++|++. | ++-.....|+.++..
T Consensus 272 ~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~---------~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 272 FRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIAD---------PSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp EEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSS---------SSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred EEEecccccccccCceeecccccccccccceeEecCC---------CCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 999987 4443 011 11111 14568899999764 4 444456788886654
|
| >2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.17 E-value=0.039 Score=40.93 Aligned_cols=66 Identities=11% Similarity=0.115 Sum_probs=35.6
Q ss_pred cCceEEEEEeCC---CCeEEEeeccCCC-----ccEEEEeCCCcc--ccc-ceeeee---eecCCceEEEEecCCCEEEE
Q psy7433 7 NKITSDFVFLGS---CSLVATAGHSSES-----KNVCLWDSLLPQ--KKA-LVQAFV---CHDQGASSLVFAPQHQLLIS 72 (213)
Q Consensus 7 ~~~v~~~~~~~~---~~~l~~~g~~s~~-----~~i~iwd~~~~~--~~~-~~~~~~---~~~~~v~~~~~~~~~~~l~~ 72 (213)
......|+|+|+ +..|..+- +.. ..|..++..... ..+ .+..+. ........++|.|+|.+.++
T Consensus 74 ~~~p~gia~~pdf~~~g~lYv~~--~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~ 151 (352)
T 2ism_A 74 ESGLLGLALHPRFPQEPYVYAYR--TVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVT 151 (352)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEE--EECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEE
T ss_pred CCCceeEEECCCCCCCCEEEEEE--ecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEE
Confidence 346789999998 44444331 222 677778764210 111 112122 11123468999999976666
Q ss_pred Ec
Q psy7433 73 AG 74 (213)
Q Consensus 73 ~~ 74 (213)
.+
T Consensus 152 ~G 153 (352)
T 2ism_A 152 TG 153 (352)
T ss_dssp CC
T ss_pred EC
Confidence 43
|
| >3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.068 Score=41.58 Aligned_cols=195 Identities=11% Similarity=0.091 Sum_probs=103.3
Q ss_pred CceEEEEE-------eCCCCeEEEeeccCCC------ccEEEEeCCCccccc--c-eeeeeeecCCceEEEEecC-CCEE
Q psy7433 8 KITSDFVF-------LGSCSLVATAGHSSES------KNVCLWDSLLPQKKA--L-VQAFVCHDQGASSLVFAPQ-HQLL 70 (213)
Q Consensus 8 ~~v~~~~~-------~~~~~~l~~~g~~s~~------~~i~iwd~~~~~~~~--~-~~~~~~~~~~v~~~~~~~~-~~~l 70 (213)
.....++| +++++.|+.+. ..+ ..|.+.+........ . ...+.. -.....++++|+ +.++
T Consensus 186 ~~p~~ia~~~~~~~~d~~G~~lyvad--~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LY 262 (496)
T 3kya_A 186 NRIRSIAFNKKIEGYADEAEYMIVAI--DYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELY 262 (496)
T ss_dssp SBEEEEEECCCBTTTBCTTCEEEEEE--CCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEE
T ss_pred CCCcEEEEeecccccCCCCCEEEEEe--CCCCCcccCceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEE
Confidence 35889999 99998555552 232 136666532100111 0 022222 234567889994 5555
Q ss_pred EEEcCCCcEEEEecc-------CceE-----------EEe-cc-cCCCCeeEEEecCCCCEEEEe-cCCCceee------
Q psy7433 71 ISAGKKGDICVIDLR-------QRVI-----------RSR-FN-AHESPVKCLAIDPHEEFFVTG-AGDGDIKS------ 123 (213)
Q Consensus 71 ~~~~~d~~v~iwd~~-------~~~~-----------~~~-~~-~~~~~i~~~~~~~~~~~l~~~-~~~~~i~~------ 123 (213)
++-..++.|..+|+. ++.. ... +. ........++++|+++.|..+ ...+.|+.
T Consensus 263 vtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~ 342 (496)
T 3kya_A 263 FNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEI 342 (496)
T ss_dssp EEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETT
T ss_pred EEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCC
Confidence 566677889999997 4443 111 11 123446789999999854444 33444430
Q ss_pred ------------------------------ceE-EEEEc-------cCCceEEEecCCCcEEEEEccCCeeeeeecCCCC
Q psy7433 124 ------------------------------PVK-CLAID-------PHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHA 165 (213)
Q Consensus 124 ------------------------------~v~-~~~~~-------~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~ 165 (213)
.+. .+... +++.++++=..+++|+.++ .++. +.++-+...
T Consensus 343 ~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~-v~TiaG~g~ 420 (496)
T 3kya_A 343 KKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI-VSTYAGRGA 420 (496)
T ss_dssp TTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB-EEEEEESCT
T ss_pred cceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEe-CCCC-EEEEecccc
Confidence 112 22332 3344444445566677766 3342 333322110
Q ss_pred c-------------e-eEEEecCCCeEEEEeCCC-CeEEEEe-cCCcEEEEeCCCCcc
Q psy7433 166 R-------------S-SFFKHIGQGVTQLHVDGG-SRLFSCG-ADGSMKVRQLPDRDA 207 (213)
Q Consensus 166 ~-------------~-~~~~~~~~~v~~~~~~~~-~~l~s~~-~d~~i~iw~~~~~~~ 207 (213)
. . ......-.....|+++++ +.|+.+. ....|+.+++.....
T Consensus 421 ~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~~~ 478 (496)
T 3kya_A 421 STSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQEEN 478 (496)
T ss_dssp THHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCCC-
T ss_pred cccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCCcc
Confidence 0 0 000001135788999985 6665554 566899999876644
|
| >3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A* | Back alignment and structure |
|---|
Probab=97.07 E-value=0.053 Score=40.29 Aligned_cols=170 Identities=13% Similarity=0.122 Sum_probs=97.2
Q ss_pred ceEEEEEeCCCCeEEEeec-----c----CCCccEEEEeCCCccc-ccceeeeee-----ecCCceEEEEec--CCC-EE
Q psy7433 9 ITSDFVFLGSCSLVATAGH-----S----SESKNVCLWDSLLPQK-KALVQAFVC-----HDQGASSLVFAP--QHQ-LL 70 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~-----~----s~~~~i~iwd~~~~~~-~~~~~~~~~-----~~~~v~~~~~~~--~~~-~l 70 (213)
..-++...|+|..++++|. . ..+|.|.++|.+.... .+.+ .+.+ ..-....+.+.+ ++. +|
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l-~~~g~~~~~~~f~PhGi~~~~d~dg~~~L 129 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSEL-EIIGNTLDISSFNPHGISTFIDDDNTVYL 129 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEEC-EEECSSCCGGGCCEEEEEEEECTTCCEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEE-EccCCCCCcCceeeeeeEEEECCCCcEEE
Confidence 4556778888877766521 0 1588999999852211 1122 1221 123556777765 343 45
Q ss_pred EEEcC---CCcEEEEeccCc----eEEEecccC-CCCeeEEEecCCCCEEEEecC-----------------CCcee---
Q psy7433 71 ISAGK---KGDICVIDLRQR----VIRSRFNAH-ESPVKCLAIDPHEEFFVTGAG-----------------DGDIK--- 122 (213)
Q Consensus 71 ~~~~~---d~~v~iwd~~~~----~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~-----------------~~~i~--- 122 (213)
+.+.. +..+-+|+++.. ..+..+.+. -...+.+.+.++|.++++... .+.+.
T Consensus 130 ~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d 209 (355)
T 3sre_A 130 LVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYS 209 (355)
T ss_dssp EEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEEC
T ss_pred EEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEE
Confidence 55422 457778777543 223334332 235678999998886666431 12221
Q ss_pred -----------eceEEEEEccCCceEEEe-cCCCcEEEEEccC-Cee--eeeecCCCCceeEEEecCCCeEEEEeCC-CC
Q psy7433 123 -----------SPVKCLAIDPHEEFFVTG-AGDGDIKVWSLSG-NHL--LYNFPGEHARSSFFKHIGQGVTQLHVDG-GS 186 (213)
Q Consensus 123 -----------~~v~~~~~~~~~~~l~~~-~~dg~i~v~d~~~-~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~ 186 (213)
...+.++|+||++.|..+ +..+.|..|++.. +.. ...+.. ......+++++ ++
T Consensus 210 ~~~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~-----------~g~PDGi~vD~e~G 278 (355)
T 3sre_A 210 PNDVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSF-----------DTLVDNISVDPVTG 278 (355)
T ss_dssp TTCCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEC-----------SSEEEEEEECTTTC
T ss_pred CCeEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeC-----------CCCCceEEEeCCCC
Confidence 457889999999866555 5678999999863 221 112211 24577788887 46
Q ss_pred eEEE
Q psy7433 187 RLFS 190 (213)
Q Consensus 187 ~l~s 190 (213)
.|.+
T Consensus 279 ~lwv 282 (355)
T 3sre_A 279 DLWV 282 (355)
T ss_dssp CEEE
T ss_pred cEEE
Confidence 5544
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=97.06 E-value=0.011 Score=47.01 Aligned_cols=31 Identities=26% Similarity=0.502 Sum_probs=26.5
Q ss_pred CceEEEecCCCcEEEEEccCCeeeeeecCCC
Q psy7433 134 EEFFVTGAGDGDIKVWSLSGNHLLYNFPGEH 164 (213)
Q Consensus 134 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~ 164 (213)
+.+++.++.||.++.||.++++.+.+++...
T Consensus 497 gglvf~g~~dg~l~A~D~~tG~~lW~~~~~~ 527 (582)
T 1flg_A 497 GNLVFTGTGDGYFKAFDAKSGKELWKFQTGS 527 (582)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred CCEEEEECCCCcEEEEECCCCCEEEEecCCC
Confidence 5677779999999999999999998887643
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=97.05 E-value=0.084 Score=42.20 Aligned_cols=80 Identities=13% Similarity=0.087 Sum_probs=47.5
Q ss_pred EEEccCCceEEEecCC----------------CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeC-CCC----
Q psy7433 128 LAIDPHEEFFVTGAGD----------------GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVD-GGS---- 186 (213)
Q Consensus 128 ~~~~~~~~~l~~~~~d----------------g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~---- 186 (213)
+++.++..+++.++.+ +.|..+|.++++.+-.++......-.+.....++. +... .++
T Consensus 246 ~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~ 324 (599)
T 1w6s_A 246 YAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARK 324 (599)
T ss_dssp CEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEE
T ss_pred eeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEE
Confidence 4566666667766655 37889999999988776653211000000012222 2221 233
Q ss_pred eEEEEecCCcEEEEeCCCCccc
Q psy7433 187 RLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 187 ~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
.++.++.+|.++++|..+++.+
T Consensus 325 ~v~~~~~~G~l~~lD~~tG~~l 346 (599)
T 1w6s_A 325 LLTHPDRNGIVYTLDRTDGALV 346 (599)
T ss_dssp EEEEECTTSEEEEEETTTCCEE
T ss_pred EEEEECCCcEEEEEECCCCCEe
Confidence 3667888999999999888654
|
| >2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis} | Back alignment and structure |
|---|
Probab=96.75 E-value=0.097 Score=38.39 Aligned_cols=145 Identities=16% Similarity=0.198 Sum_probs=88.1
Q ss_pred cCCceEEEEecCCCEEEEEc-CCCcEEEEeccCceEEE-ecccC----C--CCeeEEEe---cCCCCEEEEecC------
Q psy7433 55 DQGASSLVFAPQHQLLISAG-KKGDICVIDLRQRVIRS-RFNAH----E--SPVKCLAI---DPHEEFFVTGAG------ 117 (213)
Q Consensus 55 ~~~v~~~~~~~~~~~l~~~~-~d~~v~iwd~~~~~~~~-~~~~~----~--~~i~~~~~---~~~~~~l~~~~~------ 117 (213)
...-.+++|++....|+.++ ..+.|..||...+.... .+... . ..+..+.+ .|+++++++...
T Consensus 12 ~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~ 91 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNF 91 (334)
T ss_dssp TCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCT
T ss_pred ccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccc
Confidence 34456789988555555555 78999999997553322 33321 1 13578999 688777664331
Q ss_pred -------CCcee-----------------------e----------ceEEEEEccCCceEEEecCC-CcEEEEEccCCee
Q psy7433 118 -------DGDIK-----------------------S----------PVKCLAIDPHEEFFVTGAGD-GDIKVWSLSGNHL 156 (213)
Q Consensus 118 -------~~~i~-----------------------~----------~v~~~~~~~~~~~l~~~~~d-g~i~v~d~~~~~~ 156 (213)
+..+. . ....|+..++|+..++++.. +.|...+.... .
T Consensus 92 ~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~-~ 170 (334)
T 2p9w_A 92 ADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK-T 170 (334)
T ss_dssp TSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC-C
T ss_pred cccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC-E
Confidence 11111 1 37789999999988888777 77666665422 2
Q ss_pred eeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCC
Q psy7433 157 LYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPD 204 (213)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~ 204 (213)
...+...... .......+.++++|++ .|++...+|.+..+|+..
T Consensus 171 ~~~~~~~~~~----~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 171 VSTFAWESGN----GGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp EEEEEECCCC----SSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred EeeeeecCCC----cccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 2222111100 0001347789999976 466655599999999874
|
| >3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A* | Back alignment and structure |
|---|
Probab=96.66 E-value=0.12 Score=38.32 Aligned_cols=102 Identities=14% Similarity=0.153 Sum_probs=61.7
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeee---eecCCceEEEEecC---CCEEEEEcC----C-
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV---CHDQGASSLVFAPQ---HQLLISAGK----K- 76 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~---~~~~~v~~~~~~~~---~~~l~~~~~----d- 76 (213)
.....|+|.|+|+++++- .++.|++++.. .. ..+..+. ........++++|+ +..|+.+.. +
T Consensus 29 ~~P~~ia~~pdG~l~V~e----~~g~I~~~d~~--G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~ 101 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVTE----RPGRLVLISPS--GK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGG 101 (354)
T ss_dssp SCEEEEEEEETTEEEEEE----TTTEEEEECSS--CE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGG
T ss_pred CCCeEEEEcCCCeEEEEe----CCCEEEEEeCC--Cc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCC
Confidence 457899999999988776 56999998731 11 2222211 12345789999997 445554432 2
Q ss_pred ---CcEEEEeccCc-------eEE-Eeccc-CCCCeeEEEecCCCCEEEEec
Q psy7433 77 ---GDICVIDLRQR-------VIR-SRFNA-HESPVKCLAIDPHEEFFVTGA 116 (213)
Q Consensus 77 ---~~v~iwd~~~~-------~~~-~~~~~-~~~~i~~~~~~~~~~~l~~~~ 116 (213)
..|..|+.... +.+ ..+.. .......++|.|++.++++.+
T Consensus 102 ~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 102 HIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp CEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred CcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 56777776543 111 11221 112346799999998776644
|
| >1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1 | Back alignment and structure |
|---|
Probab=96.59 E-value=0.16 Score=38.81 Aligned_cols=173 Identities=8% Similarity=0.103 Sum_probs=106.6
Q ss_pred EEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCc-eEEE
Q psy7433 13 FVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR-VIRS 91 (213)
Q Consensus 13 ~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~-~~~~ 91 (213)
.-.+|..+.+|.- ...++.|+|+ +....++.+.- ...|.-=+|-.+. .|+..+ +..|+-|++... .+..
T Consensus 71 AIMnP~~~iiALr----ag~~lQiFnl---e~K~klks~~~-~e~VvfWkWis~~-~l~lVT-~taVyHWsi~~~s~P~k 140 (494)
T 1bpo_A 71 AIMNPASKVIALK----AGKTLQIFNI---EMKSKMKAHTM-TDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVK 140 (494)
T ss_dssp EEECSSSSCEEEE----ETTEEEEEET---TTTEEEEEEEC-SSCCCEEEEEETT-EEEEEC-SSEEEEEESSSSCCCEE
T ss_pred eeeCCCCcEEEEe----cCCeEEEEch---HHhhhhcceec-CCCceEEEecCCC-eEEEEc-CCeeEEecccCCCCchh
Confidence 4467888888876 4789999999 55666666553 3456666665443 555553 458999999643 4444
Q ss_pred ecccC----CCCeeEEEecCCCCEEEEecC---CCcee------------------------------------------
Q psy7433 92 RFNAH----ESPVKCLAIDPHEEFFVTGAG---DGDIK------------------------------------------ 122 (213)
Q Consensus 92 ~~~~~----~~~i~~~~~~~~~~~l~~~~~---~~~i~------------------------------------------ 122 (213)
.+..| ...|..-..+++.++++..+- ++.+.
T Consensus 141 vFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~ 220 (494)
T 1bpo_A 141 MFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAV 220 (494)
T ss_dssp EEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEECCSEEEEEEEECTTCSSEEEEEEEEE
T ss_pred heecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchheeeeeeeEEEecCCCCCCceEEEEEE
Confidence 44433 345667777777777664432 33222
Q ss_pred --------------------------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCC
Q psy7433 123 --------------------------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEH 164 (213)
Q Consensus 123 --------------------------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~ 164 (213)
.-..+|..++.-..+..-+.-|.|++||+.++.+++.-+-..
T Consensus 221 r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~ 300 (494)
T 1bpo_A 221 RGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG 300 (494)
T ss_dssp CSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred ecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccC
Confidence 122344444444566677778899999999999888776544
Q ss_pred CceeEEEecCCCeEEEEeCC-CCeEEEEecCCcEEEEeCCCC
Q psy7433 165 ARSSFFKHIGQGVTQLHVDG-GSRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 165 ~~~~~~~~~~~~v~~~~~~~-~~~l~s~~~d~~i~iw~~~~~ 205 (213)
.+|-..+-++ .+=++.....|.|.--.+.+.
T Consensus 301 ----------~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~ 332 (494)
T 1bpo_A 301 ----------ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEE 332 (494)
T ss_dssp ----------SCEEEEEEETTTTEEEEEETTCEEEEEEECTT
T ss_pred ----------CceEEecccCCCCcEEEEccCceEEEEEEccc
Confidence 3444433332 233555557777666666554
|
| >2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=96.46 E-value=0.17 Score=37.53 Aligned_cols=104 Identities=13% Similarity=0.099 Sum_probs=58.4
Q ss_pred CceEEEEEeCCCC-eEEEeeccCCCccEEEEeCCCcccccceeee----eeecCCceEEEEecC---CCEEEEEc-C---
Q psy7433 8 KITSDFVFLGSCS-LVATAGHSSESKNVCLWDSLLPQKKALVQAF----VCHDQGASSLVFAPQ---HQLLISAG-K--- 75 (213)
Q Consensus 8 ~~v~~~~~~~~~~-~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~----~~~~~~v~~~~~~~~---~~~l~~~~-~--- 75 (213)
...+.|+|.|+|+ ++++- ..+.|++++... .....+..+ .........++++|+ +..|+... .
T Consensus 18 ~~P~~i~~~pdG~~l~V~e----~~G~i~~~~~~g-~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~ 92 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITL----RGGELRHWQAGK-GLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGD 92 (353)
T ss_dssp SSEEEEEECSTTCCEEEEE----TTTEEEEEETTT-EECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECS
T ss_pred CCcEEEEEcCCCCEEEEEe----CCceEEEEeCCC-ceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCC
Confidence 4568999999999 77765 578999998521 111111111 112345689999995 44554442 2
Q ss_pred ----CCcEEEEeccCc-------eEE-Eeccc---CCCCeeEEEecCCCCEEEEec
Q psy7433 76 ----KGDICVIDLRQR-------VIR-SRFNA---HESPVKCLAIDPHEEFFVTGA 116 (213)
Q Consensus 76 ----d~~v~iwd~~~~-------~~~-~~~~~---~~~~i~~~~~~~~~~~l~~~~ 116 (213)
...|..|++... +.+ ..+.. .......++|.|++.++++.+
T Consensus 93 ~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 148 (353)
T 2g8s_A 93 DGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALG 148 (353)
T ss_dssp SSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEEC
T ss_pred CCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEEC
Confidence 234666665432 111 11221 112246799999997666543
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.38 E-value=0.16 Score=36.41 Aligned_cols=172 Identities=15% Similarity=0.150 Sum_probs=83.0
Q ss_pred CCCeEEEeeccC--CCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCC-----cEEEEeccCceEE
Q psy7433 18 SCSLVATAGHSS--ESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKG-----DICVIDLRQRVIR 90 (213)
Q Consensus 18 ~~~~l~~~g~~s--~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~v~iwd~~~~~~~ 90 (213)
++.+++.||... .-..+.+||..+. +...+..+.........+. .++.+++.|+.++ .+.+||+.+.+-.
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~-~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~ 137 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKD-QWTSVANMRDRRSTLGAAV--LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWF 137 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTT-EEEEECCCSSCCBSCEEEE--ETTEEEEEEEECSSCEEEEEEEEETTTTEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCC-ceeeCCCCCccccceEEEE--ECCEEEEEcCCCCCccCceEEEEeCCCCeEe
Confidence 567777776411 1246888887432 2223322222222222222 2566777776553 4778888776533
Q ss_pred Ee--cccCCCCeeEEEecCCCCEEEEecCCCce---e-----------------------eceEEEEEccCCceEEEecC
Q psy7433 91 SR--FNAHESPVKCLAIDPHEEFFVTGAGDGDI---K-----------------------SPVKCLAIDPHEEFFVTGAG 142 (213)
Q Consensus 91 ~~--~~~~~~~i~~~~~~~~~~~l~~~~~~~~i---~-----------------------~~v~~~~~~~~~~~l~~~~~ 142 (213)
.. ++...... +++. -+++.++.|+.++.- . .....+.+ ++++++.|+.
T Consensus 138 ~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~ 213 (302)
T 2xn4_A 138 HVAPMNTRRSSV-GVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGH 213 (302)
T ss_dssp EECCCSSCCBSC-EEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCB
T ss_pred ecCCCCCcccCc-eEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCC
Confidence 22 22111111 2222 256677777654321 1 11111112 4667777765
Q ss_pred C-----CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCC-----cEEEEeCCCC
Q psy7433 143 D-----GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADG-----SMKVRQLPDR 205 (213)
Q Consensus 143 d-----g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~-----~i~iw~~~~~ 205 (213)
+ ..+.+||+.+.+-...-...... .... +....+..++.|+.++ .+.+||..+.
T Consensus 214 ~~~~~~~~~~~yd~~~~~W~~~~~~~~~r--------~~~~-~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 214 DGPLVRKSVEVYDPTTNAWRQVADMNMCR--------RNAG-VCAVNGLLYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp SSSSBCCCEEEEETTTTEEEEECCCSSCC--------BSCE-EEEETTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CCCcccceEEEEeCCCCCEeeCCCCCCcc--------ccCe-EEEECCEEEEECCcCCCcccccEEEEcCCCC
Confidence 4 36888998766543222111110 1112 2222344566666553 4788888754
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.32 E-value=0.17 Score=36.17 Aligned_cols=173 Identities=12% Similarity=0.062 Sum_probs=85.2
Q ss_pred CCCeEEEeeccC--CCccEEEEeCCCccc--ccceeeeeeecCCceEEEEecCCCEEEEEcCC-----CcEEEEeccCce
Q psy7433 18 SCSLVATAGHSS--ESKNVCLWDSLLPQK--KALVQAFVCHDQGASSLVFAPQHQLLISAGKK-----GDICVIDLRQRV 88 (213)
Q Consensus 18 ~~~~l~~~g~~s--~~~~i~iwd~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~iwd~~~~~ 88 (213)
++.+++.||... ....+.+||..+... ...+..+........++.. ++++++.|+.+ ..+.+||..+.+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~ 139 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQ 139 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCe
Confidence 567777776311 124688999853220 2233222222222222222 66677777643 358889987764
Q ss_pred EE--EecccCCCCeeEEEecCCCCEEEEecCCCcee------------------------eceEEEEEccCCceEEEecC
Q psy7433 89 IR--SRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------------SPVKCLAIDPHEEFFVTGAG 142 (213)
Q Consensus 89 ~~--~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------------~~v~~~~~~~~~~~l~~~~~ 142 (213)
-. ..++........+. -+++.++.|+.++.-. .....+. -++++++.|+.
T Consensus 140 W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~ 215 (301)
T 2vpj_A 140 WSMLGDMQTAREGAGLVV--ASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL--LNDHIYVVGGF 215 (301)
T ss_dssp EEEEEECSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCB
T ss_pred EEECCCCCCCcccceEEE--ECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEE--ECCEEEEEeCC
Confidence 33 23322111122222 2577777777654311 1111111 24567777765
Q ss_pred C-----CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecC-----CcEEEEeCCCC
Q psy7433 143 D-----GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGAD-----GSMKVRQLPDR 205 (213)
Q Consensus 143 d-----g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d-----~~i~iw~~~~~ 205 (213)
+ ..+.+||+.+.+-...-...... .....+.. .+..++.|+.+ ..+.+||..+.
T Consensus 216 ~~~~~~~~v~~yd~~~~~W~~~~~~p~~r--------~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 216 DGTAHLSSVEAYNIRTDSWTTVTSMTTPR--------CYVGATVL-RGRLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp CSSSBCCCEEEEETTTTEEEEECCCSSCC--------BSCEEEEE-TTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred CCCcccceEEEEeCCCCcEEECCCCCCcc--------cceeEEEE-CCEEEEEcCcCCCcccccEEEEcCCCC
Confidence 4 46889999776543322111111 11222222 34456666655 35778887754
|
| >1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A | Back alignment and structure |
|---|
Probab=96.22 E-value=0.29 Score=37.71 Aligned_cols=105 Identities=11% Similarity=0.102 Sum_probs=60.4
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeee------ecCCceEEEEecC---CCEEEEEcC---
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVC------HDQGASSLVFAPQ---HQLLISAGK--- 75 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~------~~~~v~~~~~~~~---~~~l~~~~~--- 75 (213)
...+.|+|.|+|+++++- ...+.|++++.... ....+..+.. .......++|+|+ +..|+....
T Consensus 27 ~~P~~~a~~pdG~l~V~e---~~gg~I~~~~~~~g-~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~ 102 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTE---RATGKILRVNPESG-SVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKN 102 (454)
T ss_dssp SSEEEEEECTTSCEEEEE---TTTCEEEEECTTTC-CEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEEC
T ss_pred CCceEEEEcCCCcEEEEE---cCCCEEEEEECCCC-cEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccc
Confidence 456799999999999887 34457888875321 1112222211 2345679999995 555554432
Q ss_pred ----------CCcEEEEeccCc-------eEEE-eccc-CCCCeeEEEecCCCCEEEEec
Q psy7433 76 ----------KGDICVIDLRQR-------VIRS-RFNA-HESPVKCLAIDPHEEFFVTGA 116 (213)
Q Consensus 76 ----------d~~v~iwd~~~~-------~~~~-~~~~-~~~~i~~~~~~~~~~~l~~~~ 116 (213)
...|.-++.... +.+. .+.. .......|+|.|++.++++.+
T Consensus 103 ~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 103 PKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp TTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred cCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 134555554321 1111 1221 123468899999998777654
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.01 E-value=0.27 Score=35.51 Aligned_cols=100 Identities=8% Similarity=-0.030 Sum_probs=47.1
Q ss_pred EeCCCCeEEEeecc----CC----CccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCC--------Cc
Q psy7433 15 FLGSCSLVATAGHS----SE----SKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKK--------GD 78 (213)
Q Consensus 15 ~~~~~~~l~~~g~~----s~----~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------~~ 78 (213)
...++.+++.||.. .. ...+.+||..+. +...+..+.........+.+ ++.+++.|+.+ ..
T Consensus 42 ~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~-~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~ 118 (315)
T 4asc_A 42 VTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDS-EWLGMPPLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDS 118 (315)
T ss_dssp ECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTT-EEEECCCBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCC
T ss_pred EEECCEEEEEcCcccCCCCCccccccceEEecCCCC-eEEECCCCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccce
Confidence 34577888888730 11 123777887432 22222222211111122222 56666777632 45
Q ss_pred EEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecC
Q psy7433 79 ICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAG 117 (213)
Q Consensus 79 v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 117 (213)
+.+||..+.+-...-..........+..-+++.++.|+.
T Consensus 119 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~ 157 (315)
T 4asc_A 119 VMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGK 157 (315)
T ss_dssp EEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCB
T ss_pred EEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCC
Confidence 889999876533221111111112222235667777775
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.99 E-value=0.27 Score=35.31 Aligned_cols=94 Identities=10% Similarity=0.084 Sum_probs=49.0
Q ss_pred CCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCC----CcEEEEeccCceEEE--e
Q psy7433 19 CSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKK----GDICVIDLRQRVIRS--R 92 (213)
Q Consensus 19 ~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~v~iwd~~~~~~~~--~ 92 (213)
+.+++.||. .....+.+||.... +...+..+......-..+. .++.+++.|+.+ ..+.+||..+.+-.. .
T Consensus 12 ~~l~~~GG~-~~~~~~~~~d~~~~-~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~ 87 (306)
T 3ii7_A 12 DYRIALFGG-SQPQSCRYFNPKDY-SWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLG 87 (306)
T ss_dssp CEEEEEECC-SSTTSEEEEETTTT-EEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEEC
T ss_pred ceEEEEeCC-CCCceEEEecCCCC-CEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCC
Confidence 446666764 33678999998532 2233332222222222222 366677777754 568889988765332 2
Q ss_pred cccCCCCeeEEEecCCCCEEEEecCC
Q psy7433 93 FNAHESPVKCLAIDPHEEFFVTGAGD 118 (213)
Q Consensus 93 ~~~~~~~i~~~~~~~~~~~l~~~~~~ 118 (213)
++........+. -+++.++.|+.+
T Consensus 88 ~p~~r~~~~~~~--~~~~iyv~GG~~ 111 (306)
T 3ii7_A 88 PPTPRDSLAACA--AEGKIYTSGGSE 111 (306)
T ss_dssp CSSCCBSCEEEE--ETTEEEEECCBB
T ss_pred CCccccceeEEE--ECCEEEEECCCC
Confidence 221111122222 256777777755
|
| >1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A | Back alignment and structure |
|---|
Probab=95.93 E-value=0.4 Score=36.88 Aligned_cols=54 Identities=13% Similarity=0.270 Sum_probs=35.6
Q ss_pred cCCceEEEEecCCCEEEEEcCCCcEEEEeccCceE--EEeccc------CCCCeeEEEecCC
Q psy7433 55 DQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVI--RSRFNA------HESPVKCLAIDPH 108 (213)
Q Consensus 55 ~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~--~~~~~~------~~~~i~~~~~~~~ 108 (213)
-.....++|.|+|+++++-...+.|.+++..+++. +..+.. .......|+++|+
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pd 87 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCC
Confidence 34567999999998777655445788887655532 223321 2345678999995
|
| >3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=95.88 E-value=0.35 Score=35.79 Aligned_cols=106 Identities=8% Similarity=0.108 Sum_probs=62.5
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeee----eeecCCceEEEEecC---CCEEEEE---cCC
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAF----VCHDQGASSLVFAPQ---HQLLISA---GKK 76 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~----~~~~~~v~~~~~~~~---~~~l~~~---~~d 76 (213)
-...+.|+|.|+|+++++- ...|.|++++.... ....+..+ .........++++|+ +..|+.. ..+
T Consensus 31 L~~P~~ia~~pdG~llVte---r~~G~I~~v~~~~g-~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~ 106 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSS---RDEATITRVDAKTG-RKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASD 106 (347)
T ss_dssp CSSEEEEEECTTSCEEEEE---TTTCEEEEECTTTC-CEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSS
T ss_pred CCCceEEEEcCCCcEEEEE---ecCCEEEEEECCCC-cEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCC
Confidence 3467899999999999987 44899999975321 11112111 122456789999995 3444432 234
Q ss_pred CcEEEEeccCc----------eEE-Eeccc-CCCCeeEEEecCCCCEEEEec
Q psy7433 77 GDICVIDLRQR----------VIR-SRFNA-HESPVKCLAIDPHEEFFVTGA 116 (213)
Q Consensus 77 ~~v~iwd~~~~----------~~~-~~~~~-~~~~i~~~~~~~~~~~l~~~~ 116 (213)
+.|.-|.+..+ +.+ ..+.. .......|.|.|++.++++.+
T Consensus 107 ~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 107 NRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp EEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred CEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 45655655431 111 12221 112345799999998777754
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.87 E-value=0.3 Score=34.92 Aligned_cols=172 Identities=13% Similarity=0.164 Sum_probs=83.0
Q ss_pred CCCeEEEee-cc--CCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCC-----CcEEEEeccCce-
Q psy7433 18 SCSLVATAG-HS--SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKK-----GDICVIDLRQRV- 88 (213)
Q Consensus 18 ~~~~l~~~g-~~--s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~iwd~~~~~- 88 (213)
++.+++.|| .. .....+.+||.... +...+..+.........+ ..++.+++.|+.+ ..+.+||..+.+
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~-~W~~~~~~p~~r~~~~~~--~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~ 90 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQ-EWSFLPSITRKRRYVASV--SLHDRIYVIGGYDGRSRLSSVECLDYTADED 90 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTT-EEEECCCCSSCCBSCEEE--EETTEEEEECCBCSSCBCCCEEEEETTCCTT
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCC-eEEeCCCCChhhccccEE--EECCEEEEEcCCCCCccCceEEEEECCCCCC
Confidence 566777775 20 12347888987432 222222222211222222 2356677777754 468899987754
Q ss_pred --E--EEecccCCCCeeEEEecCCCCEEEEecCCCcee------------------------eceEEEEEccCCceEEEe
Q psy7433 89 --I--RSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------------SPVKCLAIDPHEEFFVTG 140 (213)
Q Consensus 89 --~--~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------------~~v~~~~~~~~~~~l~~~ 140 (213)
. +..++........+. .+++.++.|+.++.-. .....+. -++++++.|
T Consensus 91 ~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~G 166 (301)
T 2vpj_A 91 GVWYSVAPMNVRRGLAGATT--LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVV--ASGVIYCLG 166 (301)
T ss_dssp CCCEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEE--ETTEEEEEC
T ss_pred CeeEECCCCCCCccceeEEE--ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEE--ECCEEEEEC
Confidence 2 222221111122222 2567777776554321 1111111 246667777
Q ss_pred cCC-----CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecC-----CcEEEEeCCCC
Q psy7433 141 AGD-----GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGAD-----GSMKVRQLPDR 205 (213)
Q Consensus 141 ~~d-----g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d-----~~i~iw~~~~~ 205 (213)
+.+ ..+.+||+.+.+-...-...... .....+. ..+..++.|+.+ ..+.+||..+.
T Consensus 167 G~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r--------~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 232 (301)
T 2vpj_A 167 GYDGLNILNSVEKYDPHTGHWTNVTPMATKR--------SGAGVAL-LNDHIYVVGGFDGTAHLSSVEAYNIRTD 232 (301)
T ss_dssp CBCSSCBCCCEEEEETTTTEEEEECCCSSCC--------BSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CCCCCcccceEEEEeCCCCcEEeCCCCCccc--------ccceEEE-ECCEEEEEeCCCCCcccceEEEEeCCCC
Confidence 654 45888888766443321111110 1112222 233445666653 46788887754
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.86 E-value=0.31 Score=34.99 Aligned_cols=174 Identities=10% Similarity=0.097 Sum_probs=83.3
Q ss_pred CCCeEEEeecc-CCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCC------CcEEEEeccCceEE
Q psy7433 18 SCSLVATAGHS-SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKK------GDICVIDLRQRVIR 90 (213)
Q Consensus 18 ~~~~l~~~g~~-s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~v~iwd~~~~~~~ 90 (213)
++.+++.||.. ..-..+.+||.... +...+..+.........+. .++++++.|+.+ ..+.+||..+.+-.
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~-~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~ 131 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKD-SWYSKLGPPTPRDSLAACA--AEGKIYTSGGSEVGNSALYLFECYDTRTESWH 131 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTT-EEEEEECCSSCCBSCEEEE--ETTEEEEECCBBTTBSCCCCEEEEETTTTEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCC-eEEECCCCCccccceeEEE--ECCEEEEECCCCCCCcEeeeEEEEeCCCCceE
Confidence 56677777631 11256788887432 2223322222222222222 266677777754 45889999877543
Q ss_pred EecccCCCCeeEEEecCCCCEEEEecCCCc------ee----------------------eceEEEEEccCCceEEEecC
Q psy7433 91 SRFNAHESPVKCLAIDPHEEFFVTGAGDGD------IK----------------------SPVKCLAIDPHEEFFVTGAG 142 (213)
Q Consensus 91 ~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~------i~----------------------~~v~~~~~~~~~~~l~~~~~ 142 (213)
..-..........+..-+++.++.|+.++. .. .....+.+ ++++++.|+.
T Consensus 132 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~ 209 (306)
T 3ii7_A 132 TKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQ 209 (306)
T ss_dssp EECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCE
T ss_pred eCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCC
Confidence 321111111111111225667777764322 11 11111111 4566777765
Q ss_pred C-----CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecC-----CcEEEEeCCCC
Q psy7433 143 D-----GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGAD-----GSMKVRQLPDR 205 (213)
Q Consensus 143 d-----g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d-----~~i~iw~~~~~ 205 (213)
+ ..+.+||+.+.+-...-..+... .....+.+ .+..++.|+.+ ..+.+||..+.
T Consensus 210 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~r--------~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 210 NGLGGLDNVEYYDIKLNEWKMVSPMPWKG--------VTVKCAAV-GSIVYVLAGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp ETTEEBCCEEEEETTTTEEEECCCCSCCB--------SCCEEEEE-TTEEEEEECBCSSSBCCEEEEEETTTT
T ss_pred CCCCCCceEEEeeCCCCcEEECCCCCCCc--------cceeEEEE-CCEEEEEeCcCCCeeeeeEEEEcCCCC
Confidence 3 35788888766433221111110 12222333 34456667644 46788888764
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=95.85 E-value=0.61 Score=41.24 Aligned_cols=93 Identities=8% Similarity=0.149 Sum_probs=55.7
Q ss_pred EEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCc-eEEEe
Q psy7433 14 VFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR-VIRSR 92 (213)
Q Consensus 14 ~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~-~~~~~ 92 (213)
-.+|..+.+|.- ...++.|+|+ .+...++.+.- ..+|.-=+|-.+ +.|+..+ +..|.-|++... .+...
T Consensus 72 IMnP~~~iiALr----ag~~lQiFnl---~~k~klks~~~-~e~VvfWkWis~-~~l~lVT-~~aVyHW~~~~~s~P~k~ 141 (1630)
T 1xi4_A 72 IMNPASKVIALK----AGKTLQIFNI---EMKSKMKAHTM-TDDVTFWKWISL-NTVALVT-DNAVYHWSMEGESQPVKM 141 (1630)
T ss_pred ccCCCcceEEEe----cCCeEEEeeh---HHhhhhccccc-CCCceEEEecCC-CeeEEEc-CCeEEEeccCCCCccHHH
Confidence 356777777776 4789999999 55556665543 344555555433 3455443 458999999642 33333
Q ss_pred cccC----CCCeeEEEecCCCCEEEEec
Q psy7433 93 FNAH----ESPVKCLAIDPHEEFFVTGA 116 (213)
Q Consensus 93 ~~~~----~~~i~~~~~~~~~~~l~~~~ 116 (213)
+..| ...|..-..+++.++++..+
T Consensus 142 fdR~~~L~~~QIinY~~d~~~kW~~l~g 169 (1630)
T 1xi4_A 142 FDRHSSLAGCQIINYRTDAKQKWLLLTG 169 (1630)
T ss_pred HhcchhcccCeeEEeeeCCCCCeEEEEe
Confidence 3322 34566666677777655433
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.80 E-value=0.32 Score=34.78 Aligned_cols=97 Identities=13% Similarity=0.103 Sum_probs=47.1
Q ss_pred CCCeEEEeeccC-CCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCC-----CcEEEEeccCceEEE
Q psy7433 18 SCSLVATAGHSS-ESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKK-----GDICVIDLRQRVIRS 91 (213)
Q Consensus 18 ~~~~l~~~g~~s-~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~iwd~~~~~~~~ 91 (213)
++.+++.||... .-..+.+||.... ....+..++.....-..+. .++.+++.|+.+ ..+..||..+.+-..
T Consensus 15 ~~~i~v~GG~~~~~~~~~~~~d~~~~-~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~ 91 (302)
T 2xn4_A 15 PKLMVVVGGQAPKAIRSVECYDFKEE-RWHQVAELPSRRCRAGMVY--MAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTS 91 (302)
T ss_dssp CEEEEEECCBSSSBCCCEEEEETTTT-EEEEECCCSSCCBSCEEEE--ETTEEEEESCBCSSSBCCCEEEEETTTTEEEE
T ss_pred CCEEEEECCCCCCCCCcEEEEcCcCC-cEeEcccCCcccccceEEE--ECCEEEEEeCcCCCccccceEEECCCCCceee
Confidence 456777776311 1246888887432 2222222221111112222 266677777754 358889988765332
Q ss_pred e--cccCCCCeeEEEecCCCCEEEEecCCC
Q psy7433 92 R--FNAHESPVKCLAIDPHEEFFVTGAGDG 119 (213)
Q Consensus 92 ~--~~~~~~~i~~~~~~~~~~~l~~~~~~~ 119 (213)
. ++........+. -+++.++.|+.++
T Consensus 92 ~~~~p~~r~~~~~~~--~~~~iyv~GG~~~ 119 (302)
T 2xn4_A 92 VANMRDRRSTLGAAV--LNGLLYAVGGFDG 119 (302)
T ss_dssp ECCCSSCCBSCEEEE--ETTEEEEEEEECS
T ss_pred CCCCCccccceEEEE--ECCEEEEEcCCCC
Confidence 2 221111112222 2567777777554
|
| >3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A* | Back alignment and structure |
|---|
Probab=95.69 E-value=0.43 Score=35.37 Aligned_cols=173 Identities=10% Similarity=0.030 Sum_probs=89.2
Q ss_pred CceEEEEEeCC----CCeEEEeeccCC---C----ccEEEEeCCCcc----cccc-eeeeee-ecCCceEEEEecCCCEE
Q psy7433 8 KITSDFVFLGS----CSLVATAGHSSE---S----KNVCLWDSLLPQ----KKAL-VQAFVC-HDQGASSLVFAPQHQLL 70 (213)
Q Consensus 8 ~~v~~~~~~~~----~~~l~~~g~~s~---~----~~i~iwd~~~~~----~~~~-~~~~~~-~~~~v~~~~~~~~~~~l 70 (213)
.....|+++|+ +.++++- +. + ..|..|+..... ..+. +..+.. .......++|.|+|.+.
T Consensus 73 ~g~~gia~~pdf~~~g~lyv~~---~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Ly 149 (354)
T 3a9g_A 73 AGLLGLALHPEFPKKSWVYLYA---SYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLY 149 (354)
T ss_dssp CSEEEEEECTTTTTSCEEEEEE---EEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEE
T ss_pred CceeeEEeCCCCCcCCEEEEEE---eccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEE
Confidence 45788999997 4444443 21 2 567777763210 0111 111221 11234679999999876
Q ss_pred EEEcCC-------------CcEEEEeccCce-------EEEecccCCCCeeEEEecC-CCCEEEEecCCCc---ee----
Q psy7433 71 ISAGKK-------------GDICVIDLRQRV-------IRSRFNAHESPVKCLAIDP-HEEFFVTGAGDGD---IK---- 122 (213)
Q Consensus 71 ~~~~~d-------------~~v~iwd~~~~~-------~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~---i~---- 122 (213)
++.+.. |.|.-++....- ....+...-.....++|+| ++..+++-..... +.
T Consensus 150 vt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~ 229 (354)
T 3a9g_A 150 ITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILK 229 (354)
T ss_dssp EECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECT
T ss_pred EEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecC
Confidence 664432 344444443210 0011111112346899999 5665554322110 00
Q ss_pred -----------------------------eceEEEEEc-------cCCceEEEecCCCcEEEEEccCC-eee--eeecCC
Q psy7433 123 -----------------------------SPVKCLAID-------PHEEFFVTGAGDGDIKVWSLSGN-HLL--YNFPGE 163 (213)
Q Consensus 123 -----------------------------~~v~~~~~~-------~~~~~l~~~~~dg~i~v~d~~~~-~~~--~~~~~~ 163 (213)
..+..++|. .+|.++++.-..+.|...++... +.. ..+...
T Consensus 230 G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~ 309 (354)
T 3a9g_A 230 GGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKN 309 (354)
T ss_dssp TCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTT
T ss_pred CCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccC
Confidence 235667773 45666766666677888887642 221 122111
Q ss_pred CCceeEEEecCCCeEEEEeCCCCeEEEEe
Q psy7433 164 HARSSFFKHIGQGVTQLHVDGGSRLFSCG 192 (213)
Q Consensus 164 ~~~~~~~~~~~~~v~~~~~~~~~~l~s~~ 192 (213)
. ...+..+++.|++.|+...
T Consensus 310 ~---------~~rp~~v~~~pDG~lyv~~ 329 (354)
T 3a9g_A 310 V---------FGRLRDVVIDDDGGILIST 329 (354)
T ss_dssp T---------SCCEEEEEECTTSCEEEEE
T ss_pred C---------CCCeeEEEECCCCcEEEEE
Confidence 0 2568899999987655544
|
| >3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A | Back alignment and structure |
|---|
Probab=95.63 E-value=0.75 Score=37.75 Aligned_cols=174 Identities=12% Similarity=0.111 Sum_probs=96.8
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCc
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR 87 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~ 87 (213)
..|.++....++.+.+.+ .+| +..||... .............|.++.. .++ .|..++.+ -+..+|..++
T Consensus 63 ~~i~~i~~d~~g~lWigT----~~G-l~~yd~~~---~~f~~~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~ 131 (758)
T 3ott_A 63 TRIYCGVIIDNTYLYMGT----DNG-ILVYNYRA---DRYEQPETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSR 131 (758)
T ss_dssp SCEEEEEEETTTEEEEEE----TTE-EEEEETTT---TEECCCSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTC
T ss_pred ceEEEEEEcCCCcEEEEe----CCC-eEEEeCCC---CEEECcccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCC
Confidence 468888877777665544 444 78899732 2111111111234666654 355 45555555 5778888765
Q ss_pred eEEEecc----cCCCCeeEEEecCCCCEEEEecCCCcee---------------------eceEEEEEccCCceEEEecC
Q psy7433 88 VIRSRFN----AHESPVKCLAIDPHEEFFVTGAGDGDIK---------------------SPVKCLAIDPHEEFFVTGAG 142 (213)
Q Consensus 88 ~~~~~~~----~~~~~i~~~~~~~~~~~l~~~~~~~~i~---------------------~~v~~~~~~~~~~~l~~~~~ 142 (213)
+...... .....|.++...+++...+ ++.+|..+ ..|.++...+++..|..|+.
T Consensus 132 ~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~ 210 (758)
T 3ott_A 132 KLTSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYNGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE 210 (758)
T ss_dssp CEEEECHHHHCCSCSCEEEEEECTTCCEEE-EETTEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE
T ss_pred eEEEeccCCCCcCCCeEEEEEEcCCCCEEE-EeCCCHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC
Confidence 4332201 1234577887777776544 33444322 12667777776664445554
Q ss_pred CCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCC
Q psy7433 143 DGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 143 dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 205 (213)
+-+..+|..+++... +... ....|.++...+++.|..|+. +-+.+++..+.
T Consensus 211 -~Gl~~~~~~~~~~~~-~~~l---------~~~~i~~i~~d~~g~lWigT~-~Gl~~~~~~~~ 261 (758)
T 3ott_A 211 -GYLFQYFPSTGQIKQ-TEAF---------HNNSIKSLALDGNGDLLAGTD-NGLYVYHNDTT 261 (758)
T ss_dssp -EEEEEEETTTTEEEE-EEEE---------EEEEEEEEEECTTCCEEEEET-TEEEEECCTTS
T ss_pred -CCCeEEcCCCCeEEe-ccCC---------CCCeEEEEEEcCCCCEEEEeC-CceeEEecCCC
Confidence 457778876654321 1100 014588888887777766764 45777776553
|
| >3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A* | Back alignment and structure |
|---|
Probab=95.48 E-value=0.22 Score=37.00 Aligned_cols=75 Identities=9% Similarity=0.102 Sum_probs=47.1
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEec-CCCEEEEEcCC-CcEEEEecc
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAP-QHQLLISAGKK-GDICVIDLR 85 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d-~~v~iwd~~ 85 (213)
...+.++|+||++.|..+. +..+.|..|++.........+.+ ......-.+++.+ +|++.+++..+ +.|..|+..
T Consensus 221 ~~pNGia~spDg~~lYvad--t~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 221 DFANGINISPDGKYVYIAE--LLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp SSEEEEEECTTSSEEEEEE--GGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESCHHHHHSCCTT
T ss_pred cccCcceECCCCCEEEEEe--CCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCCceEEEEECCC
Confidence 3467899999998877764 56788999998522222222233 2234566788888 58877766543 344444443
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A | Back alignment and structure |
|---|
Probab=95.42 E-value=0.47 Score=34.11 Aligned_cols=173 Identities=10% Similarity=0.072 Sum_probs=83.1
Q ss_pred CCCCeEEEeec-cCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcC----C-----CcEEEEeccC
Q psy7433 17 GSCSLVATAGH-SSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGK----K-----GDICVIDLRQ 86 (213)
Q Consensus 17 ~~~~~l~~~g~-~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d-----~~v~iwd~~~ 86 (213)
-++.+++.||. ...-..+.+||.... +...+..++.....- +++ ..++.+++.|+. + ..+.+||..+
T Consensus 23 ~~~~i~v~GG~~~~~~~~~~~~d~~~~-~W~~~~~~p~~r~~~-~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~ 99 (308)
T 1zgk_A 23 VGRLIYTAGGYFRQSLSYLEAYNPSNG-TWLRLADLQVPRSGL-AGC-VVGGLLYAVGGRNNSPDGNTDSSALDCYNPMT 99 (308)
T ss_dssp CCCCEEEECCBSSSBCCCEEEEETTTT-EEEECCCCSSCCBSC-EEE-EETTEEEEECCEEEETTEEEECCCEEEEETTT
T ss_pred CCCEEEEEeCcCCCCcceEEEEcCCCC-eEeECCCCCcccccc-eEE-EECCEEEEECCCcCCCCCCeecceEEEECCCC
Confidence 36777888863 112246888987432 222222222211222 222 226667777765 2 3588899887
Q ss_pred ceEEEe--cccCCCCeeEEEecCCCCEEEEecCCCcee------------------------eceEEEEEccCCceEEEe
Q psy7433 87 RVIRSR--FNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------------SPVKCLAIDPHEEFFVTG 140 (213)
Q Consensus 87 ~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------------~~v~~~~~~~~~~~l~~~ 140 (213)
.+-... ++........+.+ +++.++.|+.++.-. .....+.+ ++++++.|
T Consensus 100 ~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~G 175 (308)
T 1zgk_A 100 NQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVG 175 (308)
T ss_dssp TEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEC
T ss_pred CeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEe
Confidence 653322 2211111122222 567777776443211 11111222 46667777
Q ss_pred cCC-----CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecC-----CcEEEEeCCCC
Q psy7433 141 AGD-----GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGAD-----GSMKVRQLPDR 205 (213)
Q Consensus 141 ~~d-----g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d-----~~i~iw~~~~~ 205 (213)
+.+ ..+.+||+.+.+-...-...... ..-..+.+ .+..++.|+.+ ..+.+||+.+.
T Consensus 176 G~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r--------~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~ 241 (308)
T 1zgk_A 176 GFDGTNRLNSAECYYPERNEWRMITAMNTIR--------SGAGVCVL-HNCIYAAGGYDGQDQLNSVERYDVETE 241 (308)
T ss_dssp CBCSSCBCCCEEEEETTTTEEEECCCCSSCC--------BSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CCCCCCcCceEEEEeCCCCeEeeCCCCCCcc--------ccceEEEE-CCEEEEEeCCCCCCccceEEEEeCCCC
Confidence 654 45888888765433221111110 11222222 34445666654 45788887654
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A | Back alignment and structure |
|---|
Probab=95.39 E-value=0.49 Score=34.04 Aligned_cols=172 Identities=13% Similarity=0.190 Sum_probs=83.4
Q ss_pred CCCeEEEeecc------CCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCC-----CcEEEEeccC
Q psy7433 18 SCSLVATAGHS------SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKK-----GDICVIDLRQ 86 (213)
Q Consensus 18 ~~~~l~~~g~~------s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~iwd~~~ 86 (213)
++.+++.||.. .....+.+||..+. +...+..+.........+.+ ++++++.|+.+ ..+..||..+
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~-~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~ 146 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTN-QWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPER 146 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTT-EEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCC-eEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCC
Confidence 56677777520 01246788887432 22222222222222222222 66677777643 3588899887
Q ss_pred ceEEEe--cccCCCCeeEEEecCCCCEEEEecCCCcee------------------------eceEEEEEccCCceEEEe
Q psy7433 87 RVIRSR--FNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------------SPVKCLAIDPHEEFFVTG 140 (213)
Q Consensus 87 ~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------------~~v~~~~~~~~~~~l~~~ 140 (213)
.+-... ++........+.+ +++.++.|+.++.-. .....+.+ ++++++.|
T Consensus 147 ~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~G 222 (308)
T 1zgk_A 147 DEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAG 222 (308)
T ss_dssp TEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEC
T ss_pred CeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEe
Confidence 654322 2211111122222 567777776554321 11112222 56677777
Q ss_pred cCC-----CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecC-----CcEEEEeCCCC
Q psy7433 141 AGD-----GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGAD-----GSMKVRQLPDR 205 (213)
Q Consensus 141 ~~d-----g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d-----~~i~iw~~~~~ 205 (213)
+.+ ..+.+||+.+.+-...-.....+ .... +....+..++.|+.+ ..+.+||..+.
T Consensus 223 G~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r--------~~~~-~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 223 GYDGQDQLNSVERYDVETETWTFVAPMKHRR--------SALG-ITVHQGRIYVLGGYDGHTFLDSVECYDPDTD 288 (308)
T ss_dssp CBCSSSBCCCEEEEETTTTEEEECCCCSSCC--------BSCE-EEEETTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred CCCCCCccceEEEEeCCCCcEEECCCCCCCc--------cceE-EEEECCEEEEEcCcCCCcccceEEEEcCCCC
Confidence 654 46889998776543222111110 1122 222234456666643 45778887754
|
| >3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A | Back alignment and structure |
|---|
Probab=95.35 E-value=0.32 Score=38.45 Aligned_cols=106 Identities=10% Similarity=0.066 Sum_probs=68.7
Q ss_pred ceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCccc---------ccc-eeeeeeecCCceEEEEecCCCEEEEEcCCCc
Q psy7433 9 ITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQK---------KAL-VQAFVCHDQGASSLVFAPQHQLLISAGKKGD 78 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~---------~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 78 (213)
..-.+.++|||++++.+| -.+.++.++|++.... ... ....+ -.......+|.++|+-..+-..|.+
T Consensus 324 sPHGv~vsPDGkyi~v~G--KLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSq 400 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAG--KLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQ 400 (638)
T ss_dssp SCCCEEECTTSCEEEEEC--TTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTE
T ss_pred CCcceeeCCCCCEEEEcC--CCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecce
Confidence 345678899999999987 5889999999842100 011 11121 2345677899999965566678999
Q ss_pred EEEEeccCc----------eEEEecccCCCCeeEEE-----ecCCCCEEEEecC
Q psy7433 79 ICVIDLRQR----------VIRSRFNAHESPVKCLA-----IDPHEEFFVTGAG 117 (213)
Q Consensus 79 v~iwd~~~~----------~~~~~~~~~~~~i~~~~-----~~~~~~~l~~~~~ 117 (213)
|..|++... ..+.++.-|-.+-.-.+ -.|+|++|++...
T Consensus 401 vvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK 454 (638)
T 3sbq_A 401 VVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSK 454 (638)
T ss_dssp EEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEES
T ss_pred EEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecc
Confidence 999999753 34555554433322221 2568888887654
|
| >3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=95.34 E-value=0.58 Score=34.62 Aligned_cols=55 Identities=18% Similarity=0.206 Sum_probs=38.2
Q ss_pred ecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceE--EEecc----cCCCCeeEEEecCC
Q psy7433 54 HDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVI--RSRFN----AHESPVKCLAIDPH 108 (213)
Q Consensus 54 ~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~--~~~~~----~~~~~i~~~~~~~~ 108 (213)
.-.....++|.|+|.++++--..|.|++++..+++. +..+. ........|+++|+
T Consensus 30 gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pd 90 (347)
T 3das_A 30 GLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPD 90 (347)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTT
T ss_pred CCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccc
Confidence 345678999999998777765589999998665543 22221 23456788999985
|
| >3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ... | Back alignment and structure |
|---|
Probab=94.97 E-value=1.7 Score=37.84 Aligned_cols=163 Identities=12% Similarity=0.076 Sum_probs=87.1
Q ss_pred CCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEE-ecccCCCCeeEEEecCC
Q psy7433 30 ESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRS-RFNAHESPVKCLAIDPH 108 (213)
Q Consensus 30 ~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~-~~~~~~~~i~~~~~~~~ 108 (213)
..|.|.++++.. .+.+.+.. ...++.+++++-. +|.++++. ...|++|++...+.+. ...... .+..+.....
T Consensus 862 ~~Gri~vf~v~~-~kL~lv~~-~~v~g~v~al~~~-~g~Lla~i--g~~l~vy~l~~~~~L~~~~~~~~-~i~~~~l~~~ 935 (1158)
T 3ei3_A 862 KQGRIVVFQYSD-GKLQTVAE-KEVKGAVYSMVEF-NGKLLASI--NSTVRLYEWTTEKELRTECNHYN-NIMALYLKTK 935 (1158)
T ss_dssp CCEEEEEEEEET-TEEEEEEE-EEESSCEEEEEEE-TTEEEEEE--TTEEEEEEECTTSCEEEEEEECC-CSCEEEEEEE
T ss_pred CceEEEEEEEEC-CEEEEEEE-EEcCCcCEEEeee-CCEEEEEc--CCEEEEEECCCCceEEEEeeccc-cEEEEEEecc
Confidence 458899999841 12222222 2346778887644 45444444 3689999997654333 111111 1222233234
Q ss_pred CCEEEEecCCCcee--------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCcee
Q psy7433 109 EEFFVTGAGDGDIK--------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSS 168 (213)
Q Consensus 109 ~~~l~~~~~~~~i~--------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~ 168 (213)
++++++|..-..+. ..++++.+-.+ ..++.+..+|.+.++...... .....++.....
T Consensus 936 ~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~-~t~l~aD~~gNl~vl~~~~~~-~~~~~~~~L~~~ 1013 (1158)
T 3ei3_A 936 GDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDD-DNFLGAENAFNLFVCQKDSAA-TTDEERQHLQEV 1013 (1158)
T ss_dssp TTEEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEET-TEEEEEETTSEEEEEEECTTC-CSTTGGGBEEEE
T ss_pred CCEEEEEEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEcc-CcEEEEcCCCcEEEEecCCCC-CCccccceeeeE
Confidence 66777776555443 56667776544 367788899999998764311 000000000011
Q ss_pred EEEecCCCeEEEEe---CCC----------CeEEEEecCCcEEEE
Q psy7433 169 FFKHIGQGVTQLHV---DGG----------SRLFSCGADGSMKVR 200 (213)
Q Consensus 169 ~~~~~~~~v~~~~~---~~~----------~~l~s~~~d~~i~iw 200 (213)
..-+.+..|+++.- .+. ..++-++.+|.|-+.
T Consensus 1014 ~~fhlG~~vt~~~~~sl~~~~~~~~~~~~~~~il~~T~~GsIg~l 1058 (1158)
T 3ei3_A 1014 GLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLV 1058 (1158)
T ss_dssp EEEECSSCEEEEEECCSCCC-------CEEEEEEEEETTSCEEEE
T ss_pred EEEeCCCcEeeEEeeeeecCCCccccccccceEEEEecCCEEEEE
Confidence 12223456776652 222 137778889988765
|
| >2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=93.93 E-value=1.4 Score=32.59 Aligned_cols=71 Identities=17% Similarity=0.263 Sum_probs=40.0
Q ss_pred eEEEEEcc-------CCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcE
Q psy7433 125 VKCLAIDP-------HEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSM 197 (213)
Q Consensus 125 v~~~~~~~-------~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i 197 (213)
+..+.|.+ ++.++++.-..+.|...++..++....... +......+..+++.|++.|+.++.+..=
T Consensus 273 p~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~-------~~~~~~rp~~v~~~pdG~lyv~td~~~g 345 (353)
T 2g8s_A 273 VSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRI-------LTDRGQRIRDVRTGPDGYLYVLTDESSG 345 (353)
T ss_dssp EEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEE-------SGGGCCCEEEEEECTTSCEEEEECSTTE
T ss_pred cceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEc-------ccCCCCceeEEEECCCCcEEEEEeCCCC
Confidence 45566653 456666666677777777765433221110 0011247899999998876655443333
Q ss_pred EEEeC
Q psy7433 198 KVRQL 202 (213)
Q Consensus 198 ~iw~~ 202 (213)
+||.+
T Consensus 346 ~I~ri 350 (353)
T 2g8s_A 346 ELLKV 350 (353)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 45544
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} | Back alignment and structure |
|---|
Probab=93.66 E-value=1.5 Score=32.12 Aligned_cols=56 Identities=9% Similarity=0.092 Sum_probs=27.7
Q ss_pred CCCeEEEeeccC-------CCccEEEEeCCCcccccceeeee-eecCCceEEEEecCCCEEEEEcCC
Q psy7433 18 SCSLVATAGHSS-------ESKNVCLWDSLLPQKKALVQAFV-CHDQGASSLVFAPQHQLLISAGKK 76 (213)
Q Consensus 18 ~~~~l~~~g~~s-------~~~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d 76 (213)
++++++.||... .-..+.+||..+. ....+.... .......++ ..++++++.|+.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~-~W~~~~~~~p~~r~~~~~~--~~~~~iyv~GG~~ 128 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN-SWVKLMSHAPMGMAGHVTF--VHNGKAYVTGGVN 128 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTT-EEEECSCCCSSCCSSEEEE--EETTEEEEEECCC
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCC-cEEECCCCCCcccccceEE--EECCEEEEEeCcC
Confidence 567777776300 0246888887532 222222222 111111222 2567777888754
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=93.35 E-value=1.6 Score=31.45 Aligned_cols=99 Identities=10% Similarity=-0.004 Sum_probs=45.6
Q ss_pred eCCCCeEEEeeccC-CC-------ccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCC-------CcEE
Q psy7433 16 LGSCSLVATAGHSS-ES-------KNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKK-------GDIC 80 (213)
Q Consensus 16 ~~~~~~l~~~g~~s-~~-------~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------~~v~ 80 (213)
..++.+++.||... .+ ..+.+||..+. +...+..+.........+.+ ++.+++.|+.+ ..+.
T Consensus 54 ~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~-~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~ 130 (318)
T 2woz_A 54 TQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSS-EWVGLPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVL 130 (318)
T ss_dssp CSSSCEEEEESSCC-------CCCBEEEEEETTTT-EEEECSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEE
T ss_pred EECCEEEEECCcccCccccCCCccccEEEEeCCCC-cEEECCCCCccccccceEEE--CCEEEEEcCccCCCCcccceEE
Confidence 45677888886310 11 12777887432 22222222222222222222 56677777653 3478
Q ss_pred EEeccCceEEEecccCCCCeeEEEecCCCCEEEEecC
Q psy7433 81 VIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAG 117 (213)
Q Consensus 81 iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 117 (213)
+||..+.+-...-..........+...+++.++.|+.
T Consensus 131 ~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~ 167 (318)
T 2woz_A 131 CYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGK 167 (318)
T ss_dssp EEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCE
T ss_pred EEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCC
Confidence 8888876543321111111111112245667777764
|
| >2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A | Back alignment and structure |
|---|
Probab=93.27 E-value=2.2 Score=32.92 Aligned_cols=108 Identities=13% Similarity=0.071 Sum_probs=60.0
Q ss_pred CceEEEEEeCCCC--eEEEeeccCCCccEEEEeCCCcccccceeeee---------eecCCceEEEEecC----CCEEEE
Q psy7433 8 KITSDFVFLGSCS--LVATAGHSSESKNVCLWDSLLPQKKALVQAFV---------CHDQGASSLVFAPQ----HQLLIS 72 (213)
Q Consensus 8 ~~v~~~~~~~~~~--~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~---------~~~~~v~~~~~~~~----~~~l~~ 72 (213)
...+.|+|.|+|. +|++- ..|.|++++.+.......+..+. ........++|+|+ +.+.++
T Consensus 14 ~~P~~~a~~pdG~~rl~V~e----r~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~ 89 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILE----KEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVS 89 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEE----TTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEE
T ss_pred CCceEEEECCCCCeEEEEEe----CCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEE
Confidence 4567899999985 77766 78999999752111111111111 11356788999995 333332
Q ss_pred EcC--C----------CcEEEEeccC----------ceEEEecc--cCCCCeeEEEecCCCCEEEEecCCC
Q psy7433 73 AGK--K----------GDICVIDLRQ----------RVIRSRFN--AHESPVKCLAIDPHEEFFVTGAGDG 119 (213)
Q Consensus 73 ~~~--d----------~~v~iwd~~~----------~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~~~ 119 (213)
-+. + ..|.-|.+.. .+.+..+. ........|+|.||+.++++.+..+
T Consensus 90 yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 90 YTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp EEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred EeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 221 1 1344455432 12333322 1223457899999998777766544
|
| >2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=92.69 E-value=1.2 Score=32.91 Aligned_cols=96 Identities=19% Similarity=0.228 Sum_probs=57.5
Q ss_pred CEEEEEcCCCcEEEEeccCceEEEecccC-CCCeeE------------EEec--CCCCEEEEecCCCcee--------ec
Q psy7433 68 QLLISAGKKGDICVIDLRQRVIRSRFNAH-ESPVKC------------LAID--PHEEFFVTGAGDGDIK--------SP 124 (213)
Q Consensus 68 ~~l~~~~~d~~v~iwd~~~~~~~~~~~~~-~~~i~~------------~~~~--~~~~~l~~~~~~~~i~--------~~ 124 (213)
.+++.++.||.|.-+|..+|+.+-+++.. ..++.. +... .+|+..+....+|..+ ..
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 46888889999999999999888777643 122211 1111 1333333333333222 00
Q ss_pred eEEEEEc-------c----CCceEEEecCCCcEEEEEccCCeeeeeecCC
Q psy7433 125 VKCLAID-------P----HEEFFVTGAGDGDIKVWSLSGNHLLYNFPGE 163 (213)
Q Consensus 125 v~~~~~~-------~----~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~ 163 (213)
...+... + .+..+++|+.+|.+...|+++|+.+..+...
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecC
Confidence 0001111 0 3557889999999999999999988887653
|
| >3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ... | Back alignment and structure |
|---|
Probab=92.15 E-value=5.5 Score=34.69 Aligned_cols=128 Identities=9% Similarity=0.129 Sum_probs=70.4
Q ss_pred CCEEEEEc----------CCCcEEEEeccCceEEEec-ccCCCCeeEEEecCCCCEEEEecCCCcee-------------
Q psy7433 67 HQLLISAG----------KKGDICVIDLRQRVIRSRF-NAHESPVKCLAIDPHEEFFVTGAGDGDIK------------- 122 (213)
Q Consensus 67 ~~~l~~~~----------~d~~v~iwd~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------- 122 (213)
..+++.|. ..|.|.+|++..++..... ....+++++++-- +|+.++..+..=.++
T Consensus 844 ~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~-~g~Lla~ig~~l~vy~l~~~~~L~~~~~ 922 (1158)
T 3ei3_A 844 NTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEF-NGKLLASINSTVRLYEWTTEKELRTECN 922 (1158)
T ss_dssp CCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSCEEEEEEE-TTEEEEEETTEEEEEEECTTSCEEEEEE
T ss_pred CEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCcCEEEeee-CCEEEEEcCCEEEEEECCCCceEEEEee
Confidence 46787775 3578999999754332221 1245677777644 344333332211111
Q ss_pred --eceEEEEEccCCceEEEecCCCcEEEEEcc--CCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEE
Q psy7433 123 --SPVKCLAIDPHEEFFVTGAGDGDIKVWSLS--GNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMK 198 (213)
Q Consensus 123 --~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~ 198 (213)
..+..+.....+.++++|..-..+.++..+ ..+.. .+..... ...++++.+-.++.++.+..+|.+.
T Consensus 923 ~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~-~~a~D~~--------~~~vta~~~ld~~t~l~aD~~gNl~ 993 (1158)
T 3ei3_A 923 HYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFE-EIARDFN--------PNWMSAVEILDDDNFLGAENAFNLF 993 (1158)
T ss_dssp ECCCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEE-EEEECCS--------CBCEEEEEEEETTEEEEEETTSEEE
T ss_pred ccccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEE-EEEeecc--------cccEEEEEEEccCcEEEEcCCCcEE
Confidence 001122222345677777666666655443 22222 2211111 2578888887677888899999999
Q ss_pred EEeCCC
Q psy7433 199 VRQLPD 204 (213)
Q Consensus 199 iw~~~~ 204 (213)
+.....
T Consensus 994 vl~~~~ 999 (1158)
T 3ei3_A 994 VCQKDS 999 (1158)
T ss_dssp EEEECT
T ss_pred EEecCC
Confidence 988765
|
| >3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=91.96 E-value=2.6 Score=30.45 Aligned_cols=126 Identities=5% Similarity=-0.070 Sum_probs=65.8
Q ss_pred EEEeCCCCeEEEeec-cCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcC-CCcEEEEeccCceEE
Q psy7433 13 FVFLGSCSLVATAGH-SSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGK-KGDICVIDLRQRVIR 90 (213)
Q Consensus 13 ~~~~~~~~~l~~~g~-~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~v~iwd~~~~~~~ 90 (213)
..|+++++.|+-... ...+..|...+++ +...+.+..+. + .+|+++++.|+-.+. ...|...++..+...
T Consensus 109 ~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~d----Gs~~~~lt~~~--~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~ 180 (302)
T 3s25_A 109 IYASLIGNYIYYLHYDTQTATSLYRIRID----GEEKKKIKNHY--L--FTCNTSDRYFYYNNPKNGQLYRYDTASQSEA 180 (302)
T ss_dssp EEEEEETTEEEEEEESSSSCEEEEEEETT----SCCCEEEESSC--C--CCSEEETTEEEEECTTTCCEEEEETTTTEEE
T ss_pred cEEEEeCCEEEEEeecCCCCceEEEEECC----CCCeEEEeCCC--c--eEeeEECCEEEEEeCCCceEEEEECCCCCEE
Confidence 367788888887610 0123444444542 22233333232 2 456788888876654 577888888766544
Q ss_pred EecccCCCCeeEEEecCCCCEEEEecCCC--cee--------------eceEEEEEccCCceEEEecC--CCcEEEEEcc
Q psy7433 91 SRFNAHESPVKCLAIDPHEEFFVTGAGDG--DIK--------------SPVKCLAIDPHEEFFVTGAG--DGDIKVWSLS 152 (213)
Q Consensus 91 ~~~~~~~~~i~~~~~~~~~~~l~~~~~~~--~i~--------------~~v~~~~~~~~~~~l~~~~~--dg~i~v~d~~ 152 (213)
..+.+ ... ..+.|++..|+-..... .|. ..+ ..|+|++++|..++. .+.|..-++.
T Consensus 181 ~l~~~---~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~Lt~~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~D 254 (302)
T 3s25_A 181 LFYDC---NCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVVLTEANI--EHYNVYGSLIFYQRGGDNPALCVVKND 254 (302)
T ss_dssp EEECS---CEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCCEECSCSCE--EEEEEETTEEEEEECSSSCEEEEEETT
T ss_pred EEeCC---Ccc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCeEEEeCCCc--ceEEECCCEEEEEECCCCcEEEEEECC
Confidence 33332 222 23457666655433221 221 222 347888887765532 3455555553
|
| >4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B | Back alignment and structure |
|---|
Probab=91.29 E-value=2.1 Score=36.40 Aligned_cols=40 Identities=18% Similarity=0.096 Sum_probs=33.7
Q ss_pred eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecC
Q psy7433 123 SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPG 162 (213)
Q Consensus 123 ~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~ 162 (213)
..+.+++..++..++++-+.|+++++|++.+++++.+...
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL 275 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 275 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeecc
Confidence 3567777788888999999999999999999998877543
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} | Back alignment and structure |
|---|
Probab=89.15 E-value=5.1 Score=29.24 Aligned_cols=98 Identities=14% Similarity=0.121 Sum_probs=51.4
Q ss_pred CCCeEEEeeccCCCccEEEEeCCC-cccccceeeee-eecCCceEEEEecCCCEEEEEcC-C---------CcEEEEecc
Q psy7433 18 SCSLVATAGHSSESKNVCLWDSLL-PQKKALVQAFV-CHDQGASSLVFAPQHQLLISAGK-K---------GDICVIDLR 85 (213)
Q Consensus 18 ~~~~l~~~g~~s~~~~i~iwd~~~-~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~-d---------~~v~iwd~~ 85 (213)
++.+++.||. ....+.++|... ..+...+..+. .....-.++.+ ++++++.|+. + ..+.+||..
T Consensus 19 ~~~iyv~GG~--~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~ 94 (357)
T 2uvk_A 19 NDTVYIGLGS--AGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPK 94 (357)
T ss_dssp TTEEEEECGG--GTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETT
T ss_pred CCEEEEEeCc--CCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCC
Confidence 6778888874 455789999842 12233333322 11122222222 5667777765 2 468899998
Q ss_pred CceEEEecccC-CCCeeEEEecCCCCEEEEecCCC
Q psy7433 86 QRVIRSRFNAH-ESPVKCLAIDPHEEFFVTGAGDG 119 (213)
Q Consensus 86 ~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~~~ 119 (213)
+.+-...-... .......+...+++.++.|+.++
T Consensus 95 ~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~ 129 (357)
T 2uvk_A 95 TNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQ 129 (357)
T ss_dssp TTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCH
T ss_pred CCcEEECCCCCCcccccceEEEECCEEEEEeCcCC
Confidence 87543322211 11112212225677888887653
|
| >1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1 | Back alignment and structure |
|---|
Probab=89.15 E-value=6.4 Score=30.37 Aligned_cols=107 Identities=12% Similarity=0.120 Sum_probs=62.3
Q ss_pred ccccccCceEEEEEeCC---CCeEEEeeccCCCccEEEEeCCCcccc--cc---eeeee----eecCCceEEEEecCCCE
Q psy7433 2 TYQCHNKITSDFVFLGS---CSLVATAGHSSESKNVCLWDSLLPQKK--AL---VQAFV----CHDQGASSLVFAPQHQL 69 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~---~~~l~~~g~~s~~~~i~iwd~~~~~~~--~~---~~~~~----~~~~~v~~~~~~~~~~~ 69 (213)
.++||.+....+.+..+ ...++.+......+.++|-++..+..+ .. ...+. ...+-..++..++.-..
T Consensus 193 ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygv 272 (494)
T 1bpo_A 193 PIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDV 272 (494)
T ss_dssp EECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTE
T ss_pred hheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCE
Confidence 46677666655544321 124444421123478999998533111 11 11111 11233457788887778
Q ss_pred EEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCC
Q psy7433 70 LISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPH 108 (213)
Q Consensus 70 l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~ 108 (213)
++....-|.+.+||++++.++..-+-....|...+....
T Consensus 273 iyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~ 311 (494)
T 1bpo_A 273 VFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEA 311 (494)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETT
T ss_pred EEEEecCceEEEEecccceeeeeecccCCceEEecccCC
Confidence 888889999999999999888766655555554444443
|
| >2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A | Back alignment and structure |
|---|
Probab=88.69 E-value=7 Score=30.19 Aligned_cols=31 Identities=10% Similarity=0.082 Sum_probs=23.6
Q ss_pred cCCceEEEEecCCC-EEEEEcCCCcEEEEecc
Q psy7433 55 DQGASSLVFAPQHQ-LLISAGKKGDICVIDLR 85 (213)
Q Consensus 55 ~~~v~~~~~~~~~~-~l~~~~~d~~v~iwd~~ 85 (213)
-.....|+|.|++. .|+.+...|.|++++..
T Consensus 13 L~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~ 44 (463)
T 2wg3_C 13 LRQPVGALHSGDGSQRLFILEKEGYVKILTPE 44 (463)
T ss_dssp ESSEEEEECCSSSSCCEEEEETTTEEEEECTT
T ss_pred CCCceEEEECCCCCeEEEEEeCCceEEEEeCC
Confidence 34568999999986 56666678999999753
|
| >3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=87.62 E-value=6.3 Score=28.42 Aligned_cols=125 Identities=6% Similarity=0.024 Sum_probs=62.9
Q ss_pred EEeCCCCeEEEeeccCC------------CccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEc--C--CC
Q psy7433 14 VFLGSCSLVATAGHSSE------------SKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG--K--KG 77 (213)
Q Consensus 14 ~~~~~~~~l~~~g~~s~------------~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~--d~ 77 (213)
-+++++.+|+-+.. .. ...|+..++.. . ....+. .. ....|+++++.|+-.. . +.
T Consensus 59 ~i~~~g~~Iyy~~~-~~~~~~~~~~~~~n~~~Iy~i~~dg---~-~~~~l~--~~--~~~~~s~~g~~Iy~~~~~~~~~~ 129 (302)
T 3s25_A 59 YINADKNYVYYVRN-NNQKITSQTFFSYDRNSLCRIKRNG---H-GSTVLD--PD--PCIYASLIGNYIYYLHYDTQTAT 129 (302)
T ss_dssp EEEECSSEEEEEEE-CC------CCSSCCSEEEEEEETTS---C-CCEEEE--CS--CEEEEEEETTEEEEEEESSSSCE
T ss_pred eEEEcCCEEEEEEC-CCCcccccceeccCCCeEEEEeCCC---C-cceEee--cC--CccEEEEeCCEEEEEeecCCCCc
Confidence 46788888887742 11 24566666632 1 122221 11 2337788888888765 2 34
Q ss_pred cEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecC-CCcee-------------eceEEEEEccCCceEEEecCC
Q psy7433 78 DICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAG-DGDIK-------------SPVKCLAIDPHEEFFVTGAGD 143 (213)
Q Consensus 78 ~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-~~~i~-------------~~v~~~~~~~~~~~l~~~~~d 143 (213)
.|...++.... ...+..+.. .+++|+++.|.-.+. ...|. .......++|++.+|+-...+
T Consensus 130 ~Iy~~~~dGs~-~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~~~~~~~~P~g~~iy~t~~~ 204 (302)
T 3s25_A 130 SLYRIRIDGEE-KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDCNCYKPVVLDDTNVYYMDVN 204 (302)
T ss_dssp EEEEEETTSCC-CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECSCEEEEEEEETTEEEEEEGG
T ss_pred eEEEEECCCCC-eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCCCccceeeecCCEEEEEEcC
Confidence 45555555333 233332222 345666666654443 33332 111223456888877665433
Q ss_pred --CcEEEEEcc
Q psy7433 144 --GDIKVWSLS 152 (213)
Q Consensus 144 --g~i~v~d~~ 152 (213)
..|..-++.
T Consensus 205 ~~~~I~~~~ld 215 (302)
T 3s25_A 205 RDNAIVHVNIN 215 (302)
T ss_dssp GTTEEEEECSS
T ss_pred CCcEEEEEECC
Confidence 345555554
|
| >4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-} | Back alignment and structure |
|---|
Probab=87.56 E-value=1.3 Score=38.30 Aligned_cols=38 Identities=18% Similarity=0.132 Sum_probs=30.7
Q ss_pred ceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeec
Q psy7433 124 PVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFP 161 (213)
Q Consensus 124 ~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~ 161 (213)
.+.+++..++..++++-+.|+++++|++.++.++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 34455566677899999999999999999998877754
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} | Back alignment and structure |
|---|
Probab=86.88 E-value=6.8 Score=28.03 Aligned_cols=56 Identities=7% Similarity=0.077 Sum_probs=29.4
Q ss_pred ccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcC-----C------CcEEEEeccCceE
Q psy7433 32 KNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGK-----K------GDICVIDLRQRVI 89 (213)
Q Consensus 32 ~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----d------~~v~iwd~~~~~~ 89 (213)
..+.+||..... ... ..+..............++.+++.|+. . ..+..||..+.+-
T Consensus 13 ~~~~~yd~~~~~-W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W 79 (315)
T 4asc_A 13 EGAVAYDPAANE-CYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEW 79 (315)
T ss_dssp TEEEEEETTTTE-EEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEE
T ss_pred CceEEECCCCCe-Eec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeE
Confidence 578999985322 221 222211122223333457777777773 1 1277888887654
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* | Back alignment and structure |
|---|
Probab=86.66 E-value=12 Score=30.58 Aligned_cols=70 Identities=11% Similarity=0.228 Sum_probs=40.3
Q ss_pred CCCeEEEeeccCCC---ccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCC--cEEEEeccCceE
Q psy7433 18 SCSLVATAGHSSES---KNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKG--DICVIDLRQRVI 89 (213)
Q Consensus 18 ~~~~l~~~g~~s~~---~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~v~iwd~~~~~~ 89 (213)
++.+++.||..... ..+.+||..+. +...+..+...... .+++...++.+++.|+.++ .+.+||..+.+-
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~-~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W 525 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTR-EWSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVTEEIF 525 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTT-EEEECCCCSBCCBS-CEEEECTTSCEEEECCBCSSCSEEEEETTTTEE
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCC-cEEECCCCCCCccc-ceEEEEcCCEEEEECCCCCCCCEEEEECCCCce
Confidence 77788888752211 46888887532 23333332222121 2333324778888887654 688899887654
|
| >4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B | Back alignment and structure |
|---|
Probab=80.28 E-value=3.6 Score=34.97 Aligned_cols=37 Identities=16% Similarity=0.201 Sum_probs=31.4
Q ss_pred CceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEec
Q psy7433 57 GASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRF 93 (213)
Q Consensus 57 ~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~ 93 (213)
.+.+++..++..++++-+.|+.+++|++.+++++...
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 4566777778889999999999999999999887764
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 213 | ||||
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 6e-15 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 8e-13 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 2e-11 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 4e-12 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 3e-11 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 9e-10 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 2e-07 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 2e-04 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 1e-10 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 6e-09 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 9e-08 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 9e-07 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 5e-06 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 4e-04 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 4e-06 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 1e-04 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 3e-04 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 4e-06 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 2e-05 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 5e-05 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 0.002 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 4e-05 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 0.001 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 6e-05 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 3e-04 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 1e-04 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 0.001 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 1e-04 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 2e-04 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 3e-04 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 4e-04 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 8e-04 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 8e-04 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 0.002 |
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 70.1 bits (170), Expect = 6e-15
Identities = 32/167 (19%), Positives = 53/167 (31%), Gaps = 30/167 (17%)
Query: 53 CHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFF 112
H SL AP +L +S + D+R+ + R F HES + + P+ F
Sbjct: 182 GHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAF 241
Query: 113 VTGAGDGDIK-------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSG 153
TG+ D + + ++ + G D + VW
Sbjct: 242 ATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALK 301
Query: 154 NHLLYNFPGEHARSSFFKHIGQGVTQLHV-DGGSRLFSCGADGSMKV 199
G R V+ L V D G + + D +K+
Sbjct: 302 ADRAGVLAGHDNR----------VSCLGVTDDGMAVATGSWDSFLKI 338
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 64.0 bits (154), Expect = 8e-13
Identities = 19/136 (13%), Positives = 42/136 (30%), Gaps = 22/136 (16%)
Query: 34 VCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV--IDLRQRVIRS 91
LWD ++ Q F H+ +++ F P + + + Q ++
Sbjct: 208 AKLWD---VREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTY 264
Query: 92 RFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHE 134
+ + ++ + G D + + V CL +
Sbjct: 265 SHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDG 324
Query: 135 EFFVTGAGDGDIKVWS 150
TG+ D +K+W+
Sbjct: 325 MAVATGSWDSFLKIWN 340
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 59.7 bits (143), Expect = 2e-11
Identities = 22/122 (18%), Positives = 43/122 (35%), Gaps = 4/122 (3%)
Query: 1 MTYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASS 60
T+ H + F + + AT C L ++ + + G +S
Sbjct: 220 QTFTGHESDINAICFFPNGNAFATGS----DDATCRLFDLRADQELMTYSHDNIICGITS 275
Query: 61 LVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGD 120
+ F+ +LL++ + V D + H++ V CL + TG+ D
Sbjct: 276 VSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSF 335
Query: 121 IK 122
+K
Sbjct: 336 LK 337
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 61.7 bits (148), Expect = 4e-12
Identities = 22/95 (23%), Positives = 36/95 (37%), Gaps = 3/95 (3%)
Query: 28 SSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR 87
S K + +WD + V HD ++F + ++S + V D + +
Sbjct: 223 GSRDKTIKMWD---VSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 279
Query: 88 VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK 122
NAHE V L + VTG+ D +K
Sbjct: 280 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 314
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 59.0 bits (141), Expect = 3e-11
Identities = 23/180 (12%), Positives = 53/180 (29%), Gaps = 31/180 (17%)
Query: 1 MTYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQK--------------KA 46
T+ H + +L+A+ + + + +
Sbjct: 137 KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPE 196
Query: 47 LVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAID 106
+ + G+ + L+S + I + D+ + H++ V+ +
Sbjct: 197 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 256
Query: 107 PHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDGDIKVW 149
+F ++ A D ++ V L + VTG+ D +KVW
Sbjct: 257 SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 316
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 55.1 bits (131), Expect = 9e-10
Identities = 27/196 (13%), Positives = 55/196 (28%), Gaps = 48/196 (24%)
Query: 42 PQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVK 101
Q V+ F H + + L+ S + V + + ++ H V+
Sbjct: 130 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVE 189
Query: 102 CLA--------------------IDPHEEFFVTGAGDGDIK-----------------SP 124
C++ F ++G+ D IK +
Sbjct: 190 CISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW 249
Query: 125 VKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVD- 183
V+ + +F ++ A D ++VW + VT L
Sbjct: 250 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHF----------VTSLDFHK 299
Query: 184 GGSRLFSCGADGSMKV 199
+ + D ++KV
Sbjct: 300 TAPYVVTGSVDQTVKV 315
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 48.6 bits (114), Expect = 2e-07
Identities = 29/181 (16%), Positives = 58/181 (32%), Gaps = 12/181 (6%)
Query: 36 LWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNA 95
W P+K A H + ++F P +++SA + I V D
Sbjct: 2 EWIPRPPEK----YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKG 57
Query: 96 HESPVKCLAIDPHEE-------FFVTGAGDGDIKSPVKCLAIDPHEEFFVTGAGDGD-IK 147
H V+ ++ D + D ++ + H V+ +GD I
Sbjct: 58 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIV 117
Query: 148 VWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDA 207
S ++ + +F H G+ + SC D +++V + ++
Sbjct: 118 SASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKEC 177
Query: 208 V 208
Sbjct: 178 K 178
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 39.0 bits (89), Expect = 2e-04
Identities = 13/83 (15%), Positives = 31/83 (37%), Gaps = 6/83 (7%)
Query: 1 MTYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASS 60
MT H+ +F + + ++ K + +WD + K ++ H+ +S
Sbjct: 241 MTLVGHDNWVRGVLFHSGGKFILSC---ADDKTLRVWD---YKNKRCMKTLNAHEHFVTS 294
Query: 61 LVFAPQHQLLISAGKKGDICVID 83
L F +++ + V +
Sbjct: 295 LDFHKTAPYVVTGSVDQTVKVWE 317
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 57.9 bits (138), Expect = 1e-10
Identities = 27/200 (13%), Positives = 62/200 (31%), Gaps = 17/200 (8%)
Query: 1 MTYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQK-KALVQAFVCHDQGAS 59
+T + +T+ V G +A + L ++ + ++ H
Sbjct: 199 LTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVY 258
Query: 60 SLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDG 119
S+VF Q ++S + + +L+ +S S + H
Sbjct: 259 SVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGH----------- 307
Query: 120 DIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQ 179
K V +A ++E+ ++G+ D + W + L G +
Sbjct: 308 --KDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANG--SS 363
Query: 180 LHVDGGSRLFSCGADGSMKV 199
L + + + D ++
Sbjct: 364 LGPE-YNVFATGSGDCKARI 382
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 52.5 bits (124), Expect = 6e-09
Identities = 22/152 (14%), Positives = 39/152 (25%), Gaps = 25/152 (16%)
Query: 6 HNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLL------PQKKALVQAFVCHDQGAS 59
H VF V + K L ++ P ++ H
Sbjct: 253 HKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVL 312
Query: 60 SLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDG 119
S+ + ++S K + D + H + V +A+
Sbjct: 313 SVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSL-------- 364
Query: 120 DIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSL 151
P F TG+GD ++W
Sbjct: 365 -----------GPEYNVFATGSGDCKARIWKY 385
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.1 bits (115), Expect = 9e-08
Identities = 39/183 (21%), Positives = 65/183 (35%), Gaps = 21/183 (11%)
Query: 32 KNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRS 91
+++ +WD P L + V H A+ V + ++SA I V +
Sbjct: 115 RSIAVWDMASPTDITLRRVLVGHR--AAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVR 172
Query: 92 RFNAHESPVKCLAIDPHEEFFVTGAGDGDIK---------------SPVKCLAIDPHEEF 136
N H+ + CL V+G+ D I+ I +
Sbjct: 173 TLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR 230
Query: 137 FVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGS 196
V+GA DG IKVW L G + +H G+ V +L D ++ S D +
Sbjct: 231 IVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGR-VFRLQFD-EFQIVSSSHDDT 288
Query: 197 MKV 199
+ +
Sbjct: 289 ILI 291
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.3 bits (108), Expect = 9e-07
Identities = 16/70 (22%), Positives = 25/70 (35%), Gaps = 1/70 (1%)
Query: 53 CHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFF 112
H+ SL FA + +S GK + + S V I +++
Sbjct: 263 LHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYI 321
Query: 113 VTGAGDGDIK 122
VTG+GD
Sbjct: 322 VTGSGDKKAT 331
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.0 bits (102), Expect = 5e-06
Identities = 17/72 (23%), Positives = 27/72 (37%), Gaps = 16/72 (22%)
Query: 96 HESPVKCLAIDPHEEFFVTGAGDGDIK----------------SPVKCLAIDPHEEFFVT 139
HES V L ++FV+ D + S V I +++ VT
Sbjct: 264 HESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVT 323
Query: 140 GAGDGDIKVWSL 151
G+GD V+ +
Sbjct: 324 GSGDKKATVYEV 335
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.3 bits (87), Expect = 4e-04
Identities = 10/73 (13%), Positives = 20/73 (27%), Gaps = 10/73 (13%)
Query: 127 CLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS 186
L ++FV+ D + W ++ + S + VD
Sbjct: 270 SLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSC---------DISVD-DK 319
Query: 187 RLFSCGADGSMKV 199
+ + D V
Sbjct: 320 YIVTGSGDKKATV 332
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.4 bits (103), Expect = 4e-06
Identities = 31/193 (16%), Positives = 61/193 (31%), Gaps = 31/193 (16%)
Query: 27 HSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQ 86
+ V +WD P+ + + H SL F H ++S I V D+
Sbjct: 152 SGAYDFMVKVWD---PETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVET 206
Query: 87 RVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------SPVKCL 128
H+S + + + V+G D +K
Sbjct: 207 GNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVT 264
Query: 129 AIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHV-DGGSR 187
+ ++ F +T + DG +K+W L + N + S G V ++ +
Sbjct: 265 CLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGS-----GGVVWRIRASNTKLV 319
Query: 188 LFSCGADGSMKVR 200
+G+ + +
Sbjct: 320 CAVGSRNGTEETK 332
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.8 bits (91), Expect = 1e-04
Identities = 24/164 (14%), Positives = 47/164 (28%), Gaps = 25/164 (15%)
Query: 51 FVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEE 110
V A+ + ++S + V D H + V L D
Sbjct: 131 HVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGI-- 188
Query: 111 FFVTGAGDGDIK---------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNH 155
V+G+ D I+ ++ + V+G D +K+W +
Sbjct: 189 HVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQ 248
Query: 156 LLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKV 199
L G + S + + + DG++K+
Sbjct: 249 CLQTLQGPNKHQSAVTC--------LQFNKNFVITSSDDGTVKL 284
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.6 bits (88), Expect = 3e-04
Identities = 22/136 (16%), Positives = 44/136 (32%), Gaps = 12/136 (8%)
Query: 1 MTYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASS 60
T H +TS + + A + V +WD Q +Q H +
Sbjct: 211 HTLTGHQSLTSGMELKDNILVSGNADST-----VKIWDIKTGQCLQTLQGPNKHQSAVTC 265
Query: 61 LVFAPQHQLLISAGKKGDICVIDLR-----QRVIRSRFNAHESPVKCLAIDPHEEFFVTG 115
L F I++ G + + DL+ + ++ V + + G
Sbjct: 266 LQFNKNFV--ITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVG 323
Query: 116 AGDGDIKSPVKCLAID 131
+ +G ++ + L D
Sbjct: 324 SRNGTEETKLLVLDFD 339
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 44.1 bits (102), Expect = 4e-06
Identities = 8/66 (12%), Positives = 17/66 (25%), Gaps = 2/66 (3%)
Query: 59 SSLVFAPQHQLLISAGKKGDICVIDLR--QRVIRSRFNAHESPVKCLAIDPHEEFFVTGA 116
S + + ++ + + + V H V + P VT
Sbjct: 11 SCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCG 70
Query: 117 GDGDIK 122
D +
Sbjct: 71 TDRNAY 76
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 42.5 bits (98), Expect = 2e-05
Identities = 13/77 (16%), Positives = 27/77 (35%), Gaps = 9/77 (11%)
Query: 124 PVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVD 183
P+ C A + + ++ ++ SG + + K VT +
Sbjct: 9 PISCHAWNKDRTQIAICPNNHEVHIYEKSG--------NKWVQVHELKEHNGQVTGVDWA 60
Query: 184 G-GSRLFSCGADGSMKV 199
+R+ +CG D + V
Sbjct: 61 PDSNRIVTCGTDRNAYV 77
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 41.0 bits (94), Expect = 5e-05
Identities = 13/105 (12%), Positives = 23/105 (21%), Gaps = 19/105 (18%)
Query: 99 PVKCLAIDPHEEFFVTGAGDGDIK-------------------SPVKCLAIDPHEEFFVT 139
P+ C A + + ++ V + P VT
Sbjct: 9 PISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVT 68
Query: 140 GAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG 184
D + VW+L G + + G
Sbjct: 69 CGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVG 113
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 36.0 bits (81), Expect = 0.002
Identities = 10/73 (13%), Positives = 25/73 (34%), Gaps = 4/73 (5%)
Query: 11 SDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLL 70
S + + +A + V +++ K V H+ + + +AP +
Sbjct: 11 SCHAWNKDRTQIAIC---PNNHEVHIYE-KSGNKWVQVHELKEHNGQVTGVDWAPDSNRI 66
Query: 71 ISAGKKGDICVID 83
++ G + V
Sbjct: 67 VTCGTDRNAYVWT 79
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 41.0 bits (94), Expect = 4e-05
Identities = 29/169 (17%), Positives = 53/169 (31%), Gaps = 16/169 (9%)
Query: 1 MTYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWD----------SLLPQKKALVQA 50
+ ++ F SL+A A S+ + L++ S+
Sbjct: 225 HSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLG 284
Query: 51 FVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKC----LAID 106
H SL F + L SAG G + D++ + + N H ++ LA+D
Sbjct: 285 EFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVD 344
Query: 107 PHEEFFVTGAGDG--DIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSG 153
H + +K + E D I+ + +G
Sbjct: 345 EHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAG 393
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 37.1 bits (84), Expect = 0.001
Identities = 12/89 (13%), Positives = 26/89 (29%), Gaps = 6/89 (6%)
Query: 122 KSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFP---GEHARSSFFKHIGQG-V 177
+ + ++ F V+ +GDG +KVW S H+
Sbjct: 14 DADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQA 71
Query: 178 TQLHVDGGSRLFSCGADGSMKVRQLPDRD 206
+ + + G + ++ D
Sbjct: 72 IERDAFELCLVATTSFSGDLLFYRITRED 100
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 40.7 bits (93), Expect = 6e-05
Identities = 7/65 (10%), Positives = 17/65 (26%), Gaps = 1/65 (1%)
Query: 58 ASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAG 117
A L P + + + + + H P + +G
Sbjct: 20 AVVLGNTPAGDKIQYCNGTS-VYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDV 78
Query: 118 DGDIK 122
G+++
Sbjct: 79 HGNVR 83
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 38.3 bits (87), Expect = 3e-04
Identities = 12/73 (16%), Positives = 22/73 (30%), Gaps = 8/73 (10%)
Query: 127 CLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS 186
L P + + D IK+W+++ + P I +
Sbjct: 243 GLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGT-------RIEDQQLGIIWTKQ- 294
Query: 187 RLFSCGADGSMKV 199
L S A+G +
Sbjct: 295 ALVSISANGFINF 307
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 39.6 bits (90), Expect = 1e-04
Identities = 9/46 (19%), Positives = 15/46 (32%)
Query: 122 KSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARS 167
+ L+ + + +G I W +S FP HA
Sbjct: 12 NKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATM 57
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 36.9 bits (83), Expect = 0.001
Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 7/77 (9%)
Query: 127 CLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS 186
C++ P TG+ D + VW+++ P +H H V + +
Sbjct: 229 CVSWSPDNVRLATGSLDNSVIVWNMNK-------PSDHPIIIKGAHAMSSVNSVIWLNET 281
Query: 187 RLFSCGADGSMKVRQLP 203
+ S G D ++K +P
Sbjct: 282 TIVSAGQDSNIKFWNVP 298
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 39.4 bits (90), Expect = 1e-04
Identities = 11/75 (14%), Positives = 23/75 (30%), Gaps = 3/75 (4%)
Query: 47 LVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLR---QRVIRSRFNAHESPVKCL 103
+VQ S + P LL+ G + V + V + ++ P+ C
Sbjct: 3 IVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCC 62
Query: 104 AIDPHEEFFVTGAGD 118
+ + +
Sbjct: 63 NFIDNTDLQIYVGTV 77
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 39.4 bits (90), Expect = 2e-04
Identities = 19/96 (19%), Positives = 34/96 (35%), Gaps = 10/96 (10%)
Query: 116 AGDGDIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQ 175
D ++ PV + P +F T DG I W+L + NF + S
Sbjct: 245 LKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDS-------- 296
Query: 176 GVTQLHVDGGSRLFSCGADGSMKVRQLPDRDAVVHT 211
V ++ + L +D + K D+ ++
Sbjct: 297 -VVKIACS-DNILCLATSDDTFKTNAAIDQTIELNA 330
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 38.7 bits (88), Expect = 3e-04
Identities = 12/73 (16%), Positives = 26/73 (35%), Gaps = 6/73 (8%)
Query: 127 CLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS 186
+ F T D I+VW ++ + + + + + +G + G
Sbjct: 256 FALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDK------QQLGNQQVGVVATGNG 309
Query: 187 RLFSCGADGSMKV 199
R+ S DG++
Sbjct: 310 RIISLSLDGTLNF 322
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 38.0 bits (86), Expect = 4e-04
Identities = 17/73 (23%), Positives = 27/73 (36%), Gaps = 9/73 (12%)
Query: 127 CLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS 186
+ E+ TG+ D +I ++S+ + H GV L + S
Sbjct: 220 ANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHK---------DGVNNLLWETPS 270
Query: 187 RLFSCGADGSMKV 199
L S GAD +K
Sbjct: 271 TLVSSGADACIKR 283
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 37.2 bits (84), Expect = 8e-04
Identities = 18/139 (12%), Positives = 35/139 (25%), Gaps = 18/139 (12%)
Query: 62 VFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI 121
+ +I+ I V D + + + H+ V L
Sbjct: 18 CLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVR 77
Query: 122 K------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGE 163
+ + ++ VTG+ D + VW L + + E
Sbjct: 78 VWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEE 137
Query: 164 HARSSFFKHIGQGVTQLHV 182
H F + + V
Sbjct: 138 HDYPLVFHTPEENPYFVGV 156
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 37.2 bits (84), Expect = 8e-04
Identities = 7/80 (8%), Positives = 26/80 (32%), Gaps = 9/80 (11%)
Query: 123 SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHV 182
+ + + + + + +++L L++ + A + ++
Sbjct: 282 TNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDA---------DQIWSVNF 332
Query: 183 DGGSRLFSCGADGSMKVRQL 202
G + + + DG + L
Sbjct: 333 KGKTLVAAVEKDGQSFLEIL 352
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 36.3 bits (82), Expect = 0.002
Identities = 11/64 (17%), Positives = 22/64 (34%), Gaps = 2/64 (3%)
Query: 61 LVFAPQHQLLISAGKKGDICVIDLR-QRVIRSRFNAHESPVKCLAIDP-HEEFFVTGAGD 118
H+ +I ++ V+D+ V +S + + P + +V
Sbjct: 2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY 61
Query: 119 GDIK 122
GDI
Sbjct: 62 GDIY 65
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 213 | |||
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 100.0 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 100.0 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 100.0 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 100.0 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 100.0 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 100.0 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 100.0 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 100.0 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 100.0 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 99.97 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.97 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.97 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 99.97 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.96 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 99.96 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.95 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.95 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.95 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 99.95 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 99.94 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.93 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 99.93 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 99.92 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 99.92 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.92 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.91 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.88 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.88 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.88 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.88 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.88 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.81 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.81 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.78 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.77 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 99.75 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.74 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.74 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.72 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.66 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.65 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.53 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.44 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 99.37 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 99.36 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 99.34 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 99.33 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 99.23 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.2 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 99.18 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 99.17 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 99.15 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 99.09 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 99.08 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 99.07 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 99.04 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 99.0 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 98.92 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 98.88 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 98.87 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 98.79 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 98.74 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 98.71 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 98.48 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 98.48 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 98.45 | |
| d1npea_ | 263 | Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | 98.07 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 97.98 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 97.98 | |
| d1fwxa2 | 459 | Nitrous oxide reductase, N-terminal domain {Paraco | 97.94 | |
| d1ijqa1 | 266 | Low density lipoprotein (LDL) receptor {Human (Hom | 97.74 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 97.5 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 97.33 | |
| d1utca2 | 327 | Clathrin heavy-chain terminal domain {Rat (Rattus | 96.9 | |
| d2ad6a1 | 571 | Methanol dehydrogenase, heavy chain {Methylophilus | 96.74 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 96.57 | |
| d1npea_ | 263 | Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | 96.31 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 96.29 | |
| d1crua_ | 450 | Soluble quinoprotein glucose dehydrogenase {Acinet | 96.27 | |
| d1kb0a2 | 573 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 96.23 | |
| d1flga_ | 582 | Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax | 96.19 | |
| d1v04a_ | 340 | Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory | 96.14 | |
| d1ijqa1 | 266 | Low density lipoprotein (LDL) receptor {Human (Hom | 96.04 | |
| d1qfma1 | 430 | Prolyl oligopeptidase, N-terminal domain {Pig (Sus | 95.98 | |
| d1utca2 | 327 | Clathrin heavy-chain terminal domain {Rat (Rattus | 95.31 | |
| d1h6la_ | 353 | Thermostable phytase (3-phytase) {Bacillus amyloli | 95.31 | |
| d1w6sa_ | 596 | Methanol dehydrogenase, heavy chain {Methylobacter | 95.22 | |
| d1fwxa2 | 459 | Nitrous oxide reductase, N-terminal domain {Paraco | 95.03 | |
| d1crua_ | 450 | Soluble quinoprotein glucose dehydrogenase {Acinet | 94.47 | |
| d1xipa_ | 381 | Nucleoporin NUP159 {Baker's yeast (Saccharomyces c | 94.37 | |
| d1qfma1 | 430 | Prolyl oligopeptidase, N-terminal domain {Pig (Sus | 92.29 | |
| d1kb0a2 | 573 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 92.02 | |
| d1flga_ | 582 | Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax | 91.38 | |
| d1h6la_ | 353 | Thermostable phytase (3-phytase) {Bacillus amyloli | 89.26 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 89.23 | |
| d2ad6a1 | 571 | Methanol dehydrogenase, heavy chain {Methylophilus | 89.09 | |
| d1w6sa_ | 596 | Methanol dehydrogenase, heavy chain {Methylobacter | 85.87 | |
| d2ebsa1 | 427 | Oligoxyloglucan reducing end-specific cellobiohydr | 80.33 |
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=3.4e-38 Score=231.47 Aligned_cols=184 Identities=19% Similarity=0.306 Sum_probs=161.1
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
+|+||.++|++++|+|++++||++ +.||.|+|||+ .+.+.+..+..|...|.+++|+|+++++++++.|+.+.+
T Consensus 50 tL~GH~~~I~~l~~s~~~~~l~sg---s~Dg~v~iWd~---~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i~~ 123 (340)
T d1tbga_ 50 TLRGHLAKIYAMHWGTDSRLLVSA---SQDGKLIIWDS---YTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSI 123 (340)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEE---ETTTEEEEEET---TTTEEEEEEECSCSCEEEEEECTTSSEEEEEETTCCEEE
T ss_pred EECCCCCCEEEEEECCCCCEEEEE---ECCCceeeeec---ccceeEEEEecccccEEeeEeeccceeeeeecccceeec
Confidence 689999999999999999999999 68999999999 566777788888888999999988887777766655544
Q ss_pred --------------------------------------------------------------------------------
Q psy7433 82 -------------------------------------------------------------------------------- 81 (213)
Q Consensus 82 -------------------------------------------------------------------------------- 81 (213)
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (340)
T d1tbga_ 124 YNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGA 203 (340)
T ss_dssp EESSSSCSCCCEEEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred ccccccccccccceecccccccccccccccccccccccccccccccccccccccccccccceeEeeeccccccceeEEee
Confidence
Q ss_pred -------EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-------------------eceEEEEEccCCc
Q psy7433 82 -------IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-------------------SPVKCLAIDPHEE 135 (213)
Q Consensus 82 -------wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-------------------~~v~~~~~~~~~~ 135 (213)
||+++++.+..+.+|...|.+++|+|++++|++++.|+.++ ..+.+++|+|+++
T Consensus 204 ~d~~v~i~d~~~~~~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~ 283 (340)
T d1tbga_ 204 CDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGR 283 (340)
T ss_dssp TTTEEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECSSSC
T ss_pred cCceEEEEECCCCcEEEEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeecccccccccccccccCceEEEEECCCCC
Confidence 44444445556667888999999999999999999999886 6689999999999
Q ss_pred eEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEe
Q psy7433 136 FFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQ 201 (213)
Q Consensus 136 ~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~ 201 (213)
+|++|+.||.|++||+++++++..+.+|. .+|++++|+|++ +|++++.||.|++||
T Consensus 284 ~l~~g~~dg~i~iwd~~~~~~~~~~~~H~----------~~V~~l~~s~d~~~l~s~s~Dg~v~iWd 340 (340)
T d1tbga_ 284 LLLAGYDDFNCNVWDALKADRAGVLAGHD----------NRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECCCS----------SCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEEEECCCEEEEEECCCCcEEEEEcCCC----------CCEEEEEEeCCCCEEEEEccCCEEEEeC
Confidence 99999999999999999999999999886 789999999965 699999999999997
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2.4e-36 Score=218.90 Aligned_cols=185 Identities=17% Similarity=0.300 Sum_probs=160.0
Q ss_pred CccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCc----------------------
Q psy7433 1 MTYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGA---------------------- 58 (213)
Q Consensus 1 ~~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v---------------------- 58 (213)
++|+||.++|++++|+|++++||++ +.|++|+|||++ +++.+..+.+|...|
T Consensus 11 ~~L~GH~~~I~~l~~sp~~~~l~s~---s~Dg~i~iWd~~---~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~~ 84 (317)
T d1vyhc1 11 YALSGHRSPVTRVIFHPVFSVMVSA---SEDATIKVWDYE---TGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIK 84 (317)
T ss_dssp CEEECCSSCEEEEEECSSSSEEEEE---ESSSCEEEEETT---TCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCC
T ss_pred EEEcCCCCCeEEEEEcCCCCEEEEE---eCCCeEEEEECC---CCCEEEEEeCCCCcEEEEeeecccccccccccccccc
Confidence 3689999999999999999999999 689999999984 444455554444444
Q ss_pred --------------------eEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCC
Q psy7433 59 --------------------SSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGD 118 (213)
Q Consensus 59 --------------------~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~ 118 (213)
.++.|+|+++.+++++.|+.+++||+++++....+..+...+.+++++|++..|++++.|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 164 (317)
T d1vyhc1 85 LWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 164 (317)
T ss_dssp EEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred cccccccccccccccccccceeeeccCCCceEEeeccCcceeEeecccceeeeEEccCCCcceeeecccCCCEEEEEeCC
Confidence 445555556667888889999999999999999999999999999999999999999999
Q ss_pred Ccee----------------------------------------------------------------------------
Q psy7433 119 GDIK---------------------------------------------------------------------------- 122 (213)
Q Consensus 119 ~~i~---------------------------------------------------------------------------- 122 (213)
+.++
T Consensus 165 ~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~ 244 (317)
T d1vyhc1 165 QTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV 244 (317)
T ss_dssp SCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred CeEEEEeeccceeeEEEecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCCCcEEEEEe
Confidence 8775
Q ss_pred ---eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEE
Q psy7433 123 ---SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMK 198 (213)
Q Consensus 123 ---~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~ 198 (213)
..|.+++|+|++++|++|+.||.|++||+++++++..+.+|. ..|++++|+|++ +|++++.||.|+
T Consensus 245 ~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~----------~~V~~~~~s~~~~~l~s~s~Dg~i~ 314 (317)
T d1vyhc1 245 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHE----------HFVTSLDFHKTAPYVVTGSVDQTVK 314 (317)
T ss_dssp CCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCS----------SCEEEEEECSSSSCEEEEETTSEEE
T ss_pred CCCCCEEEEEECCCCCEEEEEECCCeEEEEECCCCcEEEEEcCCC----------CCEEEEEEcCCCCEEEEEeCCCeEE
Confidence 467889999999999999999999999999999999998876 789999999964 699999999999
Q ss_pred EEe
Q psy7433 199 VRQ 201 (213)
Q Consensus 199 iw~ 201 (213)
+||
T Consensus 315 iWd 317 (317)
T d1vyhc1 315 VWE 317 (317)
T ss_dssp EEC
T ss_pred EeC
Confidence 997
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=7e-36 Score=218.21 Aligned_cols=199 Identities=15% Similarity=0.235 Sum_probs=168.2
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcC--CCcE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGK--KGDI 79 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~v 79 (213)
.+.+|.+.|++++|+|+|++||++ +.|+.|++||++.. .......+..|...|.+++|+|++++|++++. +..+
T Consensus 53 ~~~~H~~~v~~~~~sp~g~~latg---~~dg~i~iwd~~~~-~~~~~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~ 128 (311)
T d1nr0a1 53 IYTEHSHQTTVAKTSPSGYYCASG---DVHGNVRIWDTTQT-THILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFG 128 (311)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEE---ETTSEEEEEESSST-TCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSE
T ss_pred EEcCCCCCEEEEEEeCCCCeEecc---ccCceEeeeeeecc-ccccccccccccCccccccccccccccccccccccccc
Confidence 467899999999999999999999 68999999999532 12233457788999999999999999998875 4569
Q ss_pred EEEeccCceEEEecccCCCCeeEEEecCCCCE-EEEecCCCcee-----------------eceEEEEEccCCceEEEec
Q psy7433 80 CVIDLRQRVIRSRFNAHESPVKCLAIDPHEEF-FVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGA 141 (213)
Q Consensus 80 ~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~ 141 (213)
++|++++++....+.+|...|.+++|+|+++. |++++.|+.++ ..|.++.|+|+++++++++
T Consensus 129 ~v~~~~~~~~~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~~~~~~~~~~~~i~~v~~~p~~~~l~~~~ 208 (311)
T d1nr0a1 129 HVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTG 208 (311)
T ss_dssp EEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred cccccccccccccccccccccccccccccceeeecccccccccccccccccccccccccccccccccccCcccccccccc
Confidence 99999999988889999999999999999885 78899999886 6789999999999999999
Q ss_pred CCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCC-CeEEEEecCCcEEEEeCCCCcc
Q psy7433 142 GDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG-SRLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 142 ~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~d~~i~iw~~~~~~~ 207 (213)
.|+.|++||++++.....+...... ...|...|++++|+|+ .+|++++.||.|+|||+.+++.
T Consensus 209 ~d~~v~~~d~~~~~~~~~~~~~~~~---~~~h~~~V~~~~~s~~~~~l~tgs~Dg~v~iwd~~t~~~ 272 (311)
T d1nr0a1 209 GDGTIVLYNGVDGTKTGVFEDDSLK---NVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKV 272 (311)
T ss_dssp TTSCEEEEETTTCCEEEECBCTTSS---SCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred ccccccccccccccccccccccccc---cccccccccccccCCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 9999999999988877766543211 1123468999999986 4699999999999999998754
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=6.4e-35 Score=217.80 Aligned_cols=198 Identities=16% Similarity=0.178 Sum_probs=160.5
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccC
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQ 86 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~ 86 (213)
.++|+|++|+|++++||++ +.|+.|+|||.+. .+...+..+++|..+|.+++|+|++++|++++.|+.|++||+++
T Consensus 7 ~~pIt~~~~s~dg~~la~~---~~~~~i~iw~~~~-~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~ 82 (371)
T d1k8kc_ 7 VEPISCHAWNKDRTQIAIC---PNNHEVHIYEKSG-NKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKG 82 (371)
T ss_dssp SSCCCEEEECTTSSEEEEE---CSSSEEEEEEEET-TEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEET
T ss_pred CCCeEEEEECCCCCEEEEE---eCCCEEEEEECCC-CCEEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeecc
Confidence 4789999999999999999 6899999999842 23346777889999999999999999999999999999999987
Q ss_pred ceE--EEecccCCCCeeEEEecCCCCEEEEecCCCcee---------------------eceEEEEEccCCceEEEecCC
Q psy7433 87 RVI--RSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK---------------------SPVKCLAIDPHEEFFVTGAGD 143 (213)
Q Consensus 87 ~~~--~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~---------------------~~v~~~~~~~~~~~l~~~~~d 143 (213)
+.. ...+..+...+.+++|+|+++.|++++.++.++ ..|.+++|+|++++|++|+.|
T Consensus 83 ~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D 162 (371)
T d1k8kc_ 83 RTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD 162 (371)
T ss_dssp TEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred cccccccccccccccccccccccccccceeecccCcceeeeeecccccccccccccccccccccccccccccceeccccC
Confidence 653 445567888999999999999999999999875 578999999999999999999
Q ss_pred CcEEEEEccCCeeeeeecCC--------CCceeEEEecCCCeEEEEeCCC-CeEEEEecCCcEEEEeCCCCccc
Q psy7433 144 GDIKVWSLSGNHLLYNFPGE--------HARSSFFKHIGQGVTQLHVDGG-SRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 144 g~i~v~d~~~~~~~~~~~~~--------~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
+.|++||+............ .........+...|.+++|+|+ .+|++++.|+.|++||+.+++.+
T Consensus 163 ~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~ 236 (371)
T d1k8kc_ 163 FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAV 236 (371)
T ss_dssp SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEE
T ss_pred cEEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeecccccccccccCCcceEEeeecccce
Confidence 99999998643221111000 0011112334478999999996 46999999999999999876543
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=2.2e-34 Score=210.17 Aligned_cols=190 Identities=16% Similarity=0.248 Sum_probs=165.4
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCE-EEEEcCCCcEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQL-LISAGKKGDIC 80 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~v~ 80 (213)
++++|.++|.+++|+|++++|++++. ..+..+++|++ ...+....+.+|...|++++|+|++++ |++|+.|+.|+
T Consensus 97 ~~~~~~~~v~~v~~s~d~~~l~~~~~-~~~~~~~v~~~---~~~~~~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~ 172 (311)
T d1nr0a1 97 TIPVFSGPVKDISWDSESKRIAAVGE-GRERFGHVFLF---DTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVA 172 (311)
T ss_dssp EEECSSSCEEEEEECTTSCEEEEEEC-CSSCSEEEEET---TTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEE
T ss_pred ccccccCccccccccccccccccccc-ccccccccccc---ccccccccccccccccccccccccceeeecccccccccc
Confidence 36789999999999999999999853 34567999999 456677778889999999999998875 78899999999
Q ss_pred EEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee------------------------eceEEEEEccCCce
Q psy7433 81 VIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------------SPVKCLAIDPHEEF 136 (213)
Q Consensus 81 iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------------~~v~~~~~~~~~~~ 136 (213)
+||+++++....+..|..+|.++.++|+++++++++.|+.++ ..|++++|+|++++
T Consensus 173 i~d~~~~~~~~~~~~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~ 252 (311)
T d1nr0a1 173 IFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTK 252 (311)
T ss_dssp EEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSE
T ss_pred cccccccccccccccccccccccccCccccccccccccccccccccccccccccccccccccccccccccccccCCCCCE
Confidence 999999999999999999999999999999999999999876 46899999999999
Q ss_pred EEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCC
Q psy7433 137 FVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLP 203 (213)
Q Consensus 137 l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~ 203 (213)
|++|+.||.|++||+++++++.++..+.... ..+.++.|++ +.|++++.||.|++||.+
T Consensus 253 l~tgs~Dg~v~iwd~~t~~~~~~l~~~~~~~-------~~~~~~~~~~-~~l~s~s~dG~i~~wd~d 311 (311)
T d1nr0a1 253 IASASADKTIKIWNVATLKVEKTIPVGTRIE-------DQQLGIIWTK-QALVSISANGFINFVNPE 311 (311)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECCSSGG-------GCEEEEEECS-SCEEEEETTCCEEEEETT
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEECCCCcc-------ceEEEEEecC-CEEEEEECCCEEEEEeCC
Confidence 9999999999999999999999888765321 3456677764 468899999999999974
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=4.9e-34 Score=212.97 Aligned_cols=190 Identities=12% Similarity=0.102 Sum_probs=163.3
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
+|++|.++|++++|+|++++|+++ +.|+.|++||++.. .......+..|...|.+++|+|+++.|++++.|+.+++
T Consensus 46 ~l~gH~~~V~~l~fsp~~~~l~s~---s~D~~i~vWd~~~~-~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i 121 (371)
T d1k8kc_ 46 ELKEHNGQVTGVDWAPDSNRIVTC---GTDRNAYVWTLKGR-TWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISI 121 (371)
T ss_dssp EEECCSSCEEEEEEETTTTEEEEE---ETTSCEEEEEEETT-EEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEE
T ss_pred EecCCCCCEEEEEECCCCCEEEEE---ECCCeEEEEeeccc-ccccccccccccccccccccccccccceeecccCccee
Confidence 478999999999999999999999 68999999998432 23344455678889999999999999999999999999
Q ss_pred EeccCce----EEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------------------------
Q psy7433 82 IDLRQRV----IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----------------------------------- 122 (213)
Q Consensus 82 wd~~~~~----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------------------------- 122 (213)
|++.... .......+...|.+++|+|++++|++++.|+.++
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (371)
T d1k8kc_ 122 CYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSC 201 (371)
T ss_dssp EEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCS
T ss_pred eeeecccccccccccccccccccccccccccccceeccccCcEEEEEeeccCccccccccccccccccceeeeeeccCcc
Confidence 9987653 2334456888999999999999999999999875
Q ss_pred eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeC
Q psy7433 123 SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQL 202 (213)
Q Consensus 123 ~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~ 202 (213)
..+.+++|+|++++|++++.|+.|++||++++..+..+..|. .+|.+++|+|++.+++++.|+.+++|..
T Consensus 202 ~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~----------~~v~s~~fs~d~~~la~g~d~~~~~~~~ 271 (371)
T d1k8kc_ 202 GWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASET----------LPLLAVTFITESSLVAAGHDCFPVLFTY 271 (371)
T ss_dssp SCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSS----------CCEEEEEEEETTEEEEEETTSSCEEEEE
T ss_pred CcEEEEEeecccccccccccCCcceEEeeecccceeeeeccc----------ccceeeeecCCCCEEEEEcCCceEEEEe
Confidence 458999999999999999999999999999999999888876 6899999999888777888998888776
Q ss_pred CCC
Q psy7433 203 PDR 205 (213)
Q Consensus 203 ~~~ 205 (213)
...
T Consensus 272 ~~~ 274 (371)
T d1k8kc_ 272 DSA 274 (371)
T ss_dssp ETT
T ss_pred eCC
Confidence 543
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.1e-33 Score=206.01 Aligned_cols=185 Identities=16% Similarity=0.287 Sum_probs=154.3
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEE
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVI 82 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iw 82 (213)
..+|.+.|.+++|+|++++|+++ +.|+.|++||+.. ...+....+..|...+..++|+|++.++++++.|+.+++|
T Consensus 93 ~~~h~~~I~~v~~s~dg~~l~s~---~~dg~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~ 168 (337)
T d1gxra_ 93 CLNRDNYIRSCKLLPDGCTLIVG---GEASTLSIWDLAA-PTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW 168 (337)
T ss_dssp CSCTTSBEEEEEECTTSSEEEEE---ESSSEEEEEECCC-C--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred ecCCCCcEEEEEEcCCCCEEEEe---ecccccccccccc-cccccccccccccccccccccccccccccccccccccccc
Confidence 34789999999999999999999 6899999999853 2345566677888999999999999999999999999999
Q ss_pred eccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee----------------------------------------
Q psy7433 83 DLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK---------------------------------------- 122 (213)
Q Consensus 83 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~---------------------------------------- 122 (213)
|+++++.......|...+.+++|++++..+++++.++.++
T Consensus 169 ~~~~~~~~~~~~~~~~~v~~l~~s~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i 248 (337)
T d1gxra_ 169 DLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNV 248 (337)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccceeecccccccceEEEEEcccccccceecccccc
Confidence 9999888877777778888888888888888888777664
Q ss_pred -----------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCC
Q psy7433 123 -----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG 185 (213)
Q Consensus 123 -----------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 185 (213)
..|.+++|+|++++|++++.||.|++||+.+++.+..+.. ...|.+++|+|+
T Consensus 249 ~i~d~~~~~~~~~~~~~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~~~~~~~~~~-----------~~~v~~~~~s~d 317 (337)
T d1gxra_ 249 EVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKE-----------SSSVLSCDISVD 317 (337)
T ss_dssp EEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC-----------SSCEEEEEECTT
T ss_pred ccccccccccccccccccccceEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEccC-----------CCCEEEEEEeCC
Confidence 5677888888888888888888888888877777666543 268999999996
Q ss_pred C-eEEEEecCCcEEEEeC
Q psy7433 186 S-RLFSCGADGSMKVRQL 202 (213)
Q Consensus 186 ~-~l~s~~~d~~i~iw~~ 202 (213)
+ +|++++.||.|+|||+
T Consensus 318 ~~~l~t~s~D~~I~vWdl 335 (337)
T d1gxra_ 318 DKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp SCEEEEEETTSCEEEEEE
T ss_pred CCEEEEEeCCCeEEEEEE
Confidence 5 6999999999999996
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=1.3e-33 Score=204.38 Aligned_cols=188 Identities=16% Similarity=0.259 Sum_probs=147.3
Q ss_pred CccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeee-ee-------------------------
Q psy7433 1 MTYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV-CH------------------------- 54 (213)
Q Consensus 1 ~~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~-~~------------------------- 54 (213)
++++||.++|++++|+|++++|+++ +.|+.|++||++++ +.++.+. .|
T Consensus 6 ~~~~GH~~~V~~l~~s~dg~~l~s~---s~Dg~v~vWd~~~~---~~~~~~~~~h~~~v~~v~~~~~g~~~~~~~d~~v~ 79 (299)
T d1nr0a2 6 QVRYGHNKAITALSSSADGKTLFSA---DAEGHINSWDISTG---ISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLK 79 (299)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEE---ETTSCEEEEETTTC---CEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEE
T ss_pred eEcCCCCCCcEEEEECCCCCEEEEE---cCCCeEEEEECCCC---cEEEEEcCCCCCcEEEEEeeccceeecccceeeEE
Confidence 3689999999999999999999999 68999999998532 1111110 11
Q ss_pred --------------------------------------------------------cCCceEEEEecCCCEEEEEcCCCc
Q psy7433 55 --------------------------------------------------------DQGASSLVFAPQHQLLISAGKKGD 78 (213)
Q Consensus 55 --------------------------------------------------------~~~v~~~~~~~~~~~l~~~~~d~~ 78 (213)
...+.+++|+|++++|++++.|+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~ 159 (299)
T d1nr0a2 80 VVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSK 159 (299)
T ss_dssp EECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSE
T ss_pred EeccCCcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 123556677777777888888888
Q ss_pred EEEEeccCceEEE-ecccCCCCeeEEEecCCCCEEEEecCCCcee--------------------eceEEEEEccCCceE
Q psy7433 79 ICVIDLRQRVIRS-RFNAHESPVKCLAIDPHEEFFVTGAGDGDIK--------------------SPVKCLAIDPHEEFF 137 (213)
Q Consensus 79 v~iwd~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~--------------------~~v~~~~~~~~~~~l 137 (213)
|++||+++++... ....|...|.+++|+|+++++++++.++.++ ..|++++|+|++++|
T Consensus 160 i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l 239 (299)
T d1nr0a2 160 VHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRL 239 (299)
T ss_dssp EEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEE
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccce
Confidence 8888887765433 2345788999999999999999999999876 579999999999999
Q ss_pred EEecCCCcEEEEEccCCeeee--eecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCC
Q psy7433 138 VTGAGDGDIKVWSLSGNHLLY--NFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLP 203 (213)
Q Consensus 138 ~~~~~dg~i~v~d~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~ 203 (213)
++|+.||.|++||++++.... ....+. ...+.++.+.++++|++++.|+.|++||+.
T Consensus 240 ~sgs~dg~i~iwd~~~~~~~~~~~~~~~~---------~~~v~~~~~~~~~~l~s~s~D~~i~iWdl~ 298 (299)
T d1nr0a2 240 ATGSLDNSVIVWNMNKPSDHPIIIKGAHA---------MSSVNSVIWLNETTIVSAGQDSNIKFWNVP 298 (299)
T ss_dssp EEEETTSCEEEEETTCTTSCCEEETTSST---------TSCEEEEEEEETTEEEEEETTSCEEEEECC
T ss_pred EEEcCCCEEEEEECCCCCcceEEEecCCC---------CCcEEEEEECCCCEEEEEeCCCEEEEEecc
Confidence 999999999999998654332 222222 257888888878899999999999999984
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=3.3e-33 Score=208.82 Aligned_cols=197 Identities=17% Similarity=0.247 Sum_probs=154.1
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeee------------------eeecCCceEEEEecC
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAF------------------VCHDQGASSLVFAPQ 66 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~------------------~~~~~~v~~~~~~~~ 66 (213)
+|++.|+|++|+|+|++||+| + |+.|+|||+. +++.+..+ ..|...|++++|+|+
T Consensus 60 ~H~~~V~~l~fs~dg~~lasg---~-d~~i~iW~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~ 132 (388)
T d1erja_ 60 DHTSVVCCVKFSNDGEYLATG---C-NKTTQVYRVS---DGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPD 132 (388)
T ss_dssp ECSSCCCEEEECTTSSEEEEE---C-BSCEEEEETT---TCCEEEEECC-----------------CCCCBEEEEEECTT
T ss_pred CCCCcEEEEEECCCCCEEEEE---e-CCeEEEEEec---ccceEeeecccccccccccccccccccCCCCCEEEEEECCC
Confidence 699999999999999999998 4 8999999984 33333332 245667999999999
Q ss_pred CCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee------------------------
Q psy7433 67 HQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------------ 122 (213)
Q Consensus 67 ~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------------ 122 (213)
+++|++|+.||.|++||...++.+..+.+|...|.++++++++..+++++.++.++
T Consensus 133 ~~~l~s~~~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 212 (388)
T d1erja_ 133 GKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAV 212 (388)
T ss_dssp SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEE
T ss_pred CCcceecccccccccccccccccccccccccccccccccccccccccccccceeeeeeeccccccccccccccccccccc
Confidence 99999999999999999999998888888888899888888888888887777664
Q ss_pred ------------------------------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeee
Q psy7433 123 ------------------------------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNF 160 (213)
Q Consensus 123 ------------------------------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~ 160 (213)
..|.+++|+|++++|++++.||.|++||++++......
T Consensus 213 ~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~ 292 (388)
T d1erja_ 213 SPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDS 292 (388)
T ss_dssp CSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------
T ss_pred cCCCCCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEEECCCCCEEEEEECCCcEEEEeccCCcccccc
Confidence 35889999999999999999999999999876655444
Q ss_pred cCCCC--ceeEEEecCCCeEEEEeCCC-CeEEEEecCCcEEEEeCCCCccc
Q psy7433 161 PGEHA--RSSFFKHIGQGVTQLHVDGG-SRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 161 ~~~~~--~~~~~~~~~~~v~~~~~~~~-~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
..... .......+...|.+++|+|+ .+|++++.||.|++||+.+++.+
T Consensus 293 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~ 343 (388)
T d1erja_ 293 KTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPL 343 (388)
T ss_dssp ------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEE
T ss_pred ccccccceeeecccccceEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEE
Confidence 33221 12224445678999999986 46999999999999999987654
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-32 Score=202.83 Aligned_cols=189 Identities=20% Similarity=0.273 Sum_probs=163.5
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceee--eeeecCCceEEEEecCCCEEEEEcCCCcEEEE
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQA--FVCHDQGASSLVFAPQHQLLISAGKKGDICVI 82 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iw 82 (213)
+|...|.+++|+|+|++||++ + ||.|+|||++.......+.. ...|...|.+++|+|++++|++++.|+.|++|
T Consensus 49 ~H~~~V~~v~fs~~g~~latg---~-dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~dg~i~iw 124 (337)
T d1gxra_ 49 NHGEVVCAVTISNPTRHVYTG---G-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIW 124 (337)
T ss_dssp CCSSCCCEEEECSSSSEEEEE---C-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEE
T ss_pred CCCCcEEEEEECCCCCEEEEE---E-CCEEEEEEccCCcccceeEEeeecCCCCcEEEEEEcCCCCEEEEeecccccccc
Confidence 689999999999999999998 4 88999999965433333333 34678899999999999999999999999999
Q ss_pred eccCc--eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCC
Q psy7433 83 DLRQR--VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGD 143 (213)
Q Consensus 83 d~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~d 143 (213)
|+... +....+..|...+.+++|+|++..+++++.++.+. ..+.+++|++++.++++++.|
T Consensus 125 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~~~~~~~d 204 (337)
T d1gxra_ 125 DLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLD 204 (337)
T ss_dssp ECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 98754 55667778889999999999999999999999875 679999999999999999999
Q ss_pred CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCccc
Q psy7433 144 GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 144 g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
+.+++||+++++.+..+... ..|.+++|+|++ .|++++.|+.+++||+.+....
T Consensus 205 ~~v~i~d~~~~~~~~~~~~~-----------~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 259 (337)
T d1gxra_ 205 NTVRSWDLREGRQLQQHDFT-----------SQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY 259 (337)
T ss_dssp SEEEEEETTTTEEEEEEECS-----------SCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE
T ss_pred ccccccccccceeecccccc-----------cceEEEEEcccccccceeccccccccccccccccc
Confidence 99999999999888776532 689999999865 6899999999999999887654
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2.1e-31 Score=195.37 Aligned_cols=197 Identities=16% Similarity=0.252 Sum_probs=161.0
Q ss_pred cccc-cCceEEEEEeC--CCCeEEEeeccCCCccEEEEeCCCcccccc-----eeeeeeecCCceEEEEecCCCEEEEEc
Q psy7433 3 YQCH-NKITSDFVFLG--SCSLVATAGHSSESKNVCLWDSLLPQKKAL-----VQAFVCHDQGASSLVFAPQHQLLISAG 74 (213)
Q Consensus 3 l~~h-~~~v~~~~~~~--~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~l~~~~ 74 (213)
+.+| ...|++++|+| ++.+||++ +.||+|+|||++....... ...+..|..+|.+++|+++++++++++
T Consensus 58 ~~gh~~~~v~~v~fsP~~~g~~lasg---s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~ 134 (325)
T d1pgua1 58 FTGHGSSVVTTVKFSPIKGSQYLCSG---DESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVG 134 (325)
T ss_dssp ECTTTTSCEEEEEECSSTTCCEEEEE---ETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred EeCCCCCCEEEEEEeeCCCCCEEEEE---eCCCCEEEeeecCCcceeeeecccccccccccCcEEEEEECCCCCccceee
Confidence 4566 46799999998 56799998 7999999999843222111 122445778999999999999988765
Q ss_pred --CCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCE-EEEecCCCcee--------------------eceEEEEEc
Q psy7433 75 --KKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEF-FVTGAGDGDIK--------------------SPVKCLAID 131 (213)
Q Consensus 75 --~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~~~~~i~--------------------~~v~~~~~~ 131 (213)
.++.+.+|+.++++.+..+.+|...+.+++|+|++.. +++++.|+.++ ..|.+++|+
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~ 214 (325)
T d1pgua1 135 EGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFS 214 (325)
T ss_dssp CCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEEC
T ss_pred ccccceEEEEeecccccceeeeecccccccccccccccceEEEeecccccccccccccccceecccccCCCCccEEeeec
Confidence 4678999999999999999999999999999998875 67788999875 568999999
Q ss_pred cC-CceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCccc
Q psy7433 132 PH-EEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 132 ~~-~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
|+ +.++++++.|+.|++||+++++.+..+..|.... ...+.++.|.++.+|++++.|+.|+|||+.+++.+
T Consensus 215 pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~~~~~v------~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~~~~~ 286 (325)
T d1pgua1 215 PDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPV------QGGIFALSWLDSQKFATVGADATIRVWDVTTSKCV 286 (325)
T ss_dssp STTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCC------CSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEE
T ss_pred cccceeccccccccceeeeeecccccccccccccccc------ccceeeeeccCCCEEEEEeCCCeEEEEECCCCCEE
Confidence 97 6789999999999999999999999998776322 14566777776778999999999999999987543
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.6e-31 Score=199.63 Aligned_cols=184 Identities=18% Similarity=0.311 Sum_probs=144.9
Q ss_pred ccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEE-------------
Q psy7433 4 QCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLL------------- 70 (213)
Q Consensus 4 ~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l------------- 70 (213)
.+|...|++++|+|++++|+++ +.|+.|++||. ...+.+....+|...|.++.|++++..+
T Consensus 118 ~~~~~~V~~l~~s~~~~~l~s~---~~dg~v~i~~~---~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d 191 (388)
T d1erja_ 118 PSSDLYIRSVCFSPDGKFLATG---AEDRLIRIWDI---ENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWD 191 (388)
T ss_dssp -CCCCBEEEEEECTTSSEEEEE---ETTSCEEEEET---TTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred cCCCCCEEEEEECCCCCcceec---ccccccccccc---cccccccccccccccccccccccccccccccccceeeeeee
Confidence 4678889999999999999999 68999999998 4455555555566666666555555444
Q ss_pred -----------------------------EEEcCCCcEEEEeccCceEEEec-------ccCCCCeeEEEecCCCCEEEE
Q psy7433 71 -----------------------------ISAGKKGDICVIDLRQRVIRSRF-------NAHESPVKCLAIDPHEEFFVT 114 (213)
Q Consensus 71 -----------------------------~~~~~d~~v~iwd~~~~~~~~~~-------~~~~~~i~~~~~~~~~~~l~~ 114 (213)
++++.|+.|++||.+++.....+ .+|...|.+++|+|++++|++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s 271 (388)
T d1erja_ 192 LRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVS 271 (388)
T ss_dssp TTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEE
T ss_pred ccccccccccccccccccccccCCCCCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEEECCCCCEEEE
Confidence 44455555555555544333332 235678999999999999999
Q ss_pred ecCCCcee-----------------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCC
Q psy7433 115 GAGDGDIK-----------------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHA 165 (213)
Q Consensus 115 ~~~~~~i~-----------------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~ 165 (213)
++.|+.++ ..|.+++|+|++++|++|+.||.|++||+++++++..+.+|.
T Consensus 272 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~l~~H~- 350 (388)
T d1erja_ 272 GSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHR- 350 (388)
T ss_dssp EETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCS-
T ss_pred EECCCcEEEEeccCCccccccccccccceeeecccccceEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEeCCC-
Confidence 99999875 468999999999999999999999999999999999999987
Q ss_pred ceeEEEecCCCeEEEEeC------CCC-eEEEEecCCcEEEEeCC
Q psy7433 166 RSSFFKHIGQGVTQLHVD------GGS-RLFSCGADGSMKVRQLP 203 (213)
Q Consensus 166 ~~~~~~~~~~~v~~~~~~------~~~-~l~s~~~d~~i~iw~~~ 203 (213)
+.|.++++. |++ +|++++.||.|+||+++
T Consensus 351 ---------~~V~~~~~~~~~~~spd~~~l~s~s~Dg~I~iW~~~ 386 (388)
T d1erja_ 351 ---------NSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 386 (388)
T ss_dssp ---------SCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred ---------CCEEEEEEecCcccCCCCCEEEEEeCCCEEEEEeee
Confidence 678888764 444 58999999999999984
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=8.8e-30 Score=186.92 Aligned_cols=186 Identities=22% Similarity=0.334 Sum_probs=148.6
Q ss_pred ccccccCce-EEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEE
Q psy7433 2 TYQCHNKIT-SDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDIC 80 (213)
Q Consensus 2 ~l~~h~~~v-~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 80 (213)
+|+||...| +|++ +++++||++ +.|++|+|||+ .+++.+..+.+|...|.+++|+|+ ++|++++.|+.|+
T Consensus 7 tL~GH~~~vitc~~--~~~~~l~tg---s~Dg~i~vWd~---~~~~~~~~l~~H~~~V~~l~~s~~-~~l~s~s~D~~i~ 77 (355)
T d1nexb2 7 TLRGHMTSVITCLQ--FEDNYVITG---ADDKMIRVYDS---INKKFLLQLSGHDGGVWALKYAHG-GILVSGSTDRTVR 77 (355)
T ss_dssp EEECCSSSCEEEEE--EETTEEEEE---ETTTEEEEEET---TTTEEEEEEECCSSCEEEEEEETT-TEEEEEETTCCEE
T ss_pred EECCcCCCcEEEEE--ECCCEEEEE---eCCCeEEEEEC---CCCcEEEEEECCCCCEEEEEEcCC-CEEEEEecccccc
Confidence 689999886 5554 568899999 68999999999 577888999999999999999985 5899999999999
Q ss_pred EEeccCceEEEecccCCC--CeeEEEecCCCCEEEEecCCCcee------------------------------------
Q psy7433 81 VIDLRQRVIRSRFNAHES--PVKCLAIDPHEEFFVTGAGDGDIK------------------------------------ 122 (213)
Q Consensus 81 iwd~~~~~~~~~~~~~~~--~i~~~~~~~~~~~l~~~~~~~~i~------------------------------------ 122 (213)
+|+....+.......... ......+.+++..+++++.|+.++
T Consensus 78 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (355)
T d1nexb2 78 VWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVL 157 (355)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEE
T ss_pred cccccccccccccccccccccccccccccccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeee
Confidence 999998876655443322 334455666777777777777653
Q ss_pred --------------------------------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeee
Q psy7433 123 --------------------------------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLY 158 (213)
Q Consensus 123 --------------------------------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~ 158 (213)
..+.++.|+|+++++++++.|+.|++||++++..+.
T Consensus 158 ~~~~~~v~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~ 237 (355)
T d1nexb2 158 RGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMY 237 (355)
T ss_dssp ECCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTCCEEE
T ss_pred eeccccccccccccceeeeecccceeeeeecccccceeeeeccccccccccccccceeeecccccceEEeeecccccccc
Confidence 456778899999999999999999999999998888
Q ss_pred eecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCcc
Q psy7433 159 NFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~ 207 (213)
.+.+|. ..|.++++++ ++|++++.||.|++||+.+...
T Consensus 238 ~~~~h~----------~~v~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~ 275 (355)
T d1nexb2 238 TLQGHT----------ALVGLLRLSD-KFLVSAAADGSIRGWDANDYSR 275 (355)
T ss_dssp EECCCS----------SCCCEEEECS-SEEEEECTTSEEEEEETTTCCE
T ss_pred cccccc----------cccccccccc-ceeeeeecccccccccccccce
Confidence 888876 5677777764 4678888888888888876543
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=5.5e-30 Score=186.80 Aligned_cols=190 Identities=17% Similarity=0.245 Sum_probs=140.0
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecC-CCEEEEEcCCCcEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQ-HQLLISAGKKGDIC 80 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~v~ 80 (213)
.+++|.+.|++|+|+|++++||++ +.|++|+|||++.......+.....|..+|.+++|+|+ +.+|++|+.|+.|+
T Consensus 6 ~~~~h~d~I~~l~fsp~~~~L~s~---s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~ 82 (342)
T d1yfqa_ 6 IEQAPKDYISDIKIIPSKSLLLIT---SWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEIL 82 (342)
T ss_dssp CSSCCSSCEEEEEEEGGGTEEEEE---ETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEE
T ss_pred cCCCCCCCEEEEEEeCCCCEEEEE---ECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEccccccee
Confidence 568999999999999999999999 78999999998543333344444569999999999986 45899999999999
Q ss_pred EEeccCceEEEecccCCC-------------------------------------------------CeeEEEecCCCCE
Q psy7433 81 VIDLRQRVIRSRFNAHES-------------------------------------------------PVKCLAIDPHEEF 111 (213)
Q Consensus 81 iwd~~~~~~~~~~~~~~~-------------------------------------------------~i~~~~~~~~~~~ 111 (213)
+|++...........+.. ....+.+.+.+..
T Consensus 83 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (342)
T d1yfqa_ 83 KVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR 162 (342)
T ss_dssp EECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE
T ss_pred eeecccccccccccccccccccccccccccccccccccccccceeeccccccceeeecccccccccceeeeeeeeccCCc
Confidence 999976533222211111 1112233444455
Q ss_pred EEEecCCCcee---------------------------------------------------------------------
Q psy7433 112 FVTGAGDGDIK--------------------------------------------------------------------- 122 (213)
Q Consensus 112 l~~~~~~~~i~--------------------------------------------------------------------- 122 (213)
+++++.++.++
T Consensus 163 ~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~~~ 242 (342)
T d1yfqa_ 163 LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHR 242 (342)
T ss_dssp EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCC
T ss_pred eeeecCCCcEEEEecccCcccceeeeecccccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeeccccceeeeee
Confidence 55555555443
Q ss_pred ---------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCC-CeEEEEe
Q psy7433 123 ---------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGG-SRLFSCG 192 (213)
Q Consensus 123 ---------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~ 192 (213)
..+++++|+|++++|++|+.||.|++||+++++.+..+..++ .+..++++|+ +.+++++
T Consensus 243 ~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~~l~~~~~~~-----------~~~~~~~s~~~~~l~~a~ 311 (342)
T d1yfqa_ 243 LNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFN-----------EDSVVKIACSDNILCLAT 311 (342)
T ss_dssp CCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCS-----------SSEEEEEEECSSEEEEEE
T ss_pred eccCCCcccccceeEEecCCccEEEEECCCCEEEEEECCCCcEEEEecCCC-----------CCEEEEEEeCCCEEEEEE
Confidence 357899999999999999999999999999999998886653 3344555553 4688888
Q ss_pred cCCcEEEEeCCCC
Q psy7433 193 ADGSMKVRQLPDR 205 (213)
Q Consensus 193 ~d~~i~iw~~~~~ 205 (213)
.|+.+++|.....
T Consensus 312 sdd~~~~~~~~~~ 324 (342)
T d1yfqa_ 312 SDDTFKTNAAIDQ 324 (342)
T ss_dssp ECTHHHHCSSSCT
T ss_pred cCCcEEEeeeeCC
Confidence 8888888876544
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=6.3e-29 Score=182.10 Aligned_cols=190 Identities=16% Similarity=0.226 Sum_probs=153.6
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCE-EEEEcCCCcEEE
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQL-LISAGKKGDICV 81 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~v~i 81 (213)
+..|.++|.+++|+|+++++++++. +.++.+++|+. .+.+.+..+.+|...|.+++|+|++++ +++++.|+.+++
T Consensus 111 ~~~~~~~v~~v~~s~~~~~l~~~~~-~~~~~~~~~~~---~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~ 186 (325)
T d1pgua1 111 FQVLAGPISDISWDFEGRRLCVVGE-GRDNFGVFISW---DSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVF 186 (325)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEEC-CSSCSEEEEET---TTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEE
T ss_pred cccccCcEEEEEECCCCCccceeec-cccceEEEEee---cccccceeeeecccccccccccccccceEEEeeccccccc
Confidence 4568889999999999999988753 45778999998 566778888889999999999998765 678999999999
Q ss_pred EeccCceEEEec---ccCCCCeeEEEecCC-CCEEEEecCCCcee-----------------eceEEEEEc---cCCceE
Q psy7433 82 IDLRQRVIRSRF---NAHESPVKCLAIDPH-EEFFVTGAGDGDIK-----------------SPVKCLAID---PHEEFF 137 (213)
Q Consensus 82 wd~~~~~~~~~~---~~~~~~i~~~~~~~~-~~~l~~~~~~~~i~-----------------~~v~~~~~~---~~~~~l 137 (213)
||..+.+....+ ..+...|.+++|+|+ +.++++++.|+.++ .++..+.|+ |++++|
T Consensus 187 ~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~~~~~v~~~~~s~~~~dg~~l 266 (325)
T d1pgua1 187 YQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKF 266 (325)
T ss_dssp EETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEE
T ss_pred ccccccccceecccccCCCCccEEeeeccccceeccccccccceeeeeeccccccccccccccccccceeeeeccCCCEE
Confidence 999887665554 346778999999996 67899999999886 334444444 678999
Q ss_pred EEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeC
Q psy7433 138 VTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQL 202 (213)
Q Consensus 138 ~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~ 202 (213)
++++.|+.|+|||+++++++..+..+..... ....++.+.++++|++++.||.|++||+
T Consensus 267 ~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~s~s~dg~i~vwdl 325 (325)
T d1pgua1 267 ATVGADATIRVWDVTTSKCVQKWTLDKQQLG------NQQVGVVATGNGRIISLSLDGTLNFYEL 325 (325)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECCTTCGG------GCEEEEEEEETTEEEEEETTSCEEEEET
T ss_pred EEEeCCCeEEEEECCCCCEEEEEEecCCccc------CeEEEEEECCCCEEEEEECCCEEEEEEC
Confidence 9999999999999999999988876653210 2234555566778999999999999996
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.97 E-value=2.5e-28 Score=178.54 Aligned_cols=155 Identities=17% Similarity=0.230 Sum_probs=138.4
Q ss_pred cceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee---
Q psy7433 46 ALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK--- 122 (213)
Q Consensus 46 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~--- 122 (213)
+..+++++|.+.|++++|+|++++|++|+.||.|++||+.+++.+..+..|..+|.+++|+|+++++++++.|+.+.
T Consensus 46 ~~~~tL~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i~~~~ 125 (340)
T d1tbga_ 46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN 125 (340)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEEECSCSCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred eeeEEECCCCCCEEEEEECCCCCEEEEEECCCceeeeecccceeEEEEecccccEEeeEeeccceeeeeecccceeeccc
Confidence 45677899999999999999999999999999999999999999999999999999999999999999999999774
Q ss_pred --------------------------------------------------------------------------------
Q psy7433 123 -------------------------------------------------------------------------------- 122 (213)
Q Consensus 123 -------------------------------------------------------------------------------- 122 (213)
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 205 (340)
T d1tbga_ 126 LKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACD 205 (340)
T ss_dssp SSSSCSCCCEEEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred ccccccccccceecccccccccccccccccccccccccccccccccccccccccccccceeEeeeccccccceeEEeecC
Confidence
Q ss_pred ---------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEE
Q psy7433 123 ---------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLH 181 (213)
Q Consensus 123 ---------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 181 (213)
..|++++|+|++++|++|+.|+.|++||++.......+..... ...|.+++
T Consensus 206 ~~v~i~d~~~~~~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~--------~~~i~~~~ 277 (340)
T d1tbga_ 206 ASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNI--------ICGITSVS 277 (340)
T ss_dssp TEEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTC--------CSCEEEEE
T ss_pred ceEEEEECCCCcEEEEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeecccccccccccccc--------cCceEEEE
Confidence 5789999999999999999999999999998888776654332 26799999
Q ss_pred eCCCC-eEEEEecCCcEEEEeCCCCccc
Q psy7433 182 VDGGS-RLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 182 ~~~~~-~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
|+|++ +|++++.||.|++||+.+++.+
T Consensus 278 ~s~~~~~l~~g~~dg~i~iwd~~~~~~~ 305 (340)
T d1tbga_ 278 FSKSGRLLLAGYDDFNCNVWDALKADRA 305 (340)
T ss_dssp ECSSSCEEEEEETTSCEEEEETTTCCEE
T ss_pred ECCCCCEEEEEECCCEEEEEECCCCcEE
Confidence 99965 6899999999999999887543
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.96 E-value=6e-28 Score=173.46 Aligned_cols=133 Identities=20% Similarity=0.327 Sum_probs=109.2
Q ss_pred EEEEecCCCEEEEEcCC-CcEEEEeccCceEEEecc-cCCCCeeEEEecCCCCEEEEecCCCcee---------------
Q psy7433 60 SLVFAPQHQLLISAGKK-GDICVIDLRQRVIRSRFN-AHESPVKCLAIDPHEEFFVTGAGDGDIK--------------- 122 (213)
Q Consensus 60 ~~~~~~~~~~l~~~~~d-~~v~iwd~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~~~~i~--------------- 122 (213)
..+++++++.+++++.+ +.+++|++...+....+. .+...+++++|+|++.+|++++.++.++
T Consensus 123 ~~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~ 202 (287)
T d1pgua2 123 GSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWA 202 (287)
T ss_dssp EEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSC
T ss_pred eeeeeccCcceeeeccccceeeeeeccccceeeeeeeccCCceeEEEeccCccccccccccccccceeeccccccccccc
Confidence 34566667777776665 468999987766555544 4677899999999999999999999886
Q ss_pred ---eceEEEEEccC----------CceEEEecCCCcEEEEEccC-CeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeE
Q psy7433 123 ---SPVKCLAIDPH----------EEFFVTGAGDGDIKVWSLSG-NHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRL 188 (213)
Q Consensus 123 ---~~v~~~~~~~~----------~~~l~~~~~dg~i~v~d~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l 188 (213)
..|.+++|+|. +.++++|+.|+.|++||+++ .+.+..+.+|. ..|+++.|+|++.|
T Consensus 203 ~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~~~h~----------~~V~~v~~~~~~~l 272 (287)
T d1pgua2 203 FRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHK----------DGVNNLLWETPSTL 272 (287)
T ss_dssp CCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSST----------TCEEEEEEEETTEE
T ss_pred ccccccceeeecccccccccccCCCCeeEeecCCCeEEEEECCCCCeEEEEeCCCC----------CCeEEEEECCCCEE
Confidence 66899999875 45899999999999999976 45566666665 78999999999899
Q ss_pred EEEecCCcEEEEeC
Q psy7433 189 FSCGADGSMKVRQL 202 (213)
Q Consensus 189 ~s~~~d~~i~iw~~ 202 (213)
++++.|+.|++|++
T Consensus 273 ~s~g~D~~v~iW~i 286 (287)
T d1pgua2 273 VSSGADACIKRWNV 286 (287)
T ss_dssp EEEETTSCEEEEEE
T ss_pred EEEECCCeEEEEEE
Confidence 99999999999986
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=1.2e-26 Score=169.17 Aligned_cols=186 Identities=16% Similarity=0.253 Sum_probs=145.9
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
+|+||.+.|.+ +++++|++||++ +.|++|+|||+ .+++++..+.+|...|.+++|+|+ +|++++.|+.+++
T Consensus 11 ~l~GH~~~V~s-~~~~~g~~l~sg---s~Dg~i~vWd~---~~~~~~~~~~~h~~~V~~v~~~~~--~l~s~s~D~~~~~ 81 (342)
T d2ovrb2 11 VLKGHDDHVIT-CLQFCGNRIVSG---SDDNTLKVWSA---VTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKV 81 (342)
T ss_dssp EEECSTTSCEE-EEEEETTEEEEE---ETTSCEEEEET---TTCCEEEECCCCSSCEEEEEEETT--EEEEEETTSCEEE
T ss_pred EECCcCCceEE-EEEECCCEEEEE---eCCCeEEEEEC---CCCCEEEEEeCCCCCEEEEEeCCC--ccccceecccccc
Confidence 58999999876 467789999999 68999999999 567788899999999999999874 9999999999999
Q ss_pred EeccCceEEEecccCCCCee--------------------------------------EEEecCCCCEEEEecCCCcee-
Q psy7433 82 IDLRQRVIRSRFNAHESPVK--------------------------------------CLAIDPHEEFFVTGAGDGDIK- 122 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~--------------------------------------~~~~~~~~~~l~~~~~~~~i~- 122 (213)
|+................+. .....+....+++++.++.++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~ 161 (342)
T d2ovrb2 82 WNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKV 161 (342)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEE
T ss_pred cccccccceecccccceeEeeeecccccccccccceeEEEeecccccceeeeecccccceeeccccceeeeecCCCeEEE
Confidence 99876644333222221111 112223344567777777665
Q ss_pred --------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeE
Q psy7433 123 --------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRL 188 (213)
Q Consensus 123 --------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l 188 (213)
.......+++++.++++++.||.|++||++.++.+..+..|. ..+.++.+++ ++|
T Consensus 162 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~----------~~v~~~~~~~-~~l 230 (342)
T d2ovrb2 162 WDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ----------SLTSGMELKD-NIL 230 (342)
T ss_dssp EEGGGTEEEEEECCCSSCEEEEEECSSEEEEEETTSCEEEEETTTCCEEEEECCCC----------SCEEEEEEET-TEE
T ss_pred eecccceeeEEEcCcccccccccCCCCEEEEEeCCCeEEEeecccceeeeEecccc----------cceeEEecCC-CEE
Confidence 233455667788999999999999999999999999888876 6788888875 489
Q ss_pred EEEecCCcEEEEeCCCCcc
Q psy7433 189 FSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 189 ~s~~~d~~i~iw~~~~~~~ 207 (213)
++++.|+.|++||+...+.
T Consensus 231 ~s~s~d~~i~iwd~~~~~~ 249 (342)
T d2ovrb2 231 VSGNADSTVKIWDIKTGQC 249 (342)
T ss_dssp EEEETTSCEEEEETTTCCE
T ss_pred EEEcCCCEEEEEecccccc
Confidence 9999999999999987654
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.95 E-value=1.9e-26 Score=172.90 Aligned_cols=200 Identities=12% Similarity=0.169 Sum_probs=143.7
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccc---cce-------------------------------
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKK---ALV------------------------------- 48 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~---~~~------------------------------- 48 (213)
.++|.+.|+++++++ ++++++ +.|++|+|||....... ...
T Consensus 10 ~~~H~~~I~~v~~~~--~~l~S~---S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 84 (393)
T d1sq9a_ 10 GKAHDADIFSVSACN--SFTVSC---SGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVAT 84 (393)
T ss_dssp SSCSSSCEEEEEECS--SEEEEE---ETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEE
T ss_pred CCcccCccEEEEEeC--CEEEEE---ECCCeEEEEECCCCCCCcccceeEeeeeccCCceEeeeEeeeccCCCCCcEEEE
Confidence 579999999999864 689999 78999999996321100 000
Q ss_pred -------eeee---------------------eecCCceEEEEecC-----CCEEEEEcCCCcEEEEeccCce-------
Q psy7433 49 -------QAFV---------------------CHDQGASSLVFAPQ-----HQLLISAGKKGDICVIDLRQRV------- 88 (213)
Q Consensus 49 -------~~~~---------------------~~~~~v~~~~~~~~-----~~~l~~~~~d~~v~iwd~~~~~------- 88 (213)
..+. .+...+..++|.++ +.++++++.||.+++|++....
T Consensus 85 ~~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~ 164 (393)
T d1sq9a_ 85 TSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLT 164 (393)
T ss_dssp EETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTT
T ss_pred EeCCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccceee
Confidence 0000 01123445566553 3578888889999999874310
Q ss_pred -----------EEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------------eceEEEEEccCC
Q psy7433 89 -----------IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------------SPVKCLAIDPHE 134 (213)
Q Consensus 89 -----------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------------~~v~~~~~~~~~ 134 (213)
.......+...+.+++|+|++ +|++|+.|+.++ .+|.+++|+|++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg 243 (393)
T d1sq9a_ 165 LNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQG 243 (393)
T ss_dssp TCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSST
T ss_pred eeeccceecccceecccCCCCcEEEEEECCCC-EEEEEeCCCcEEEEeecccccccccccccccccccceEEEccccccc
Confidence 111122345568899999987 889999999886 478999999999
Q ss_pred ceEEEecCCC---cEEEEEccCCeeeeeecCCCCce---eEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCcc
Q psy7433 135 EFFVTGAGDG---DIKVWSLSGNHLLYNFPGEHARS---SFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 135 ~~l~~~~~dg---~i~v~d~~~~~~~~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~ 207 (213)
++|++|+.|+ .|++||+++++.+..+....... .....|...|++++|+|++ +|+|++.|+.|++||+.+++.
T Consensus 244 ~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g~~ 323 (393)
T d1sq9a_ 244 SLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKER 323 (393)
T ss_dssp TEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEE
T ss_pred ceeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEEECCCCCE
Confidence 9999999887 48999999998888876432211 1233456889999999965 699999999999999998854
Q ss_pred c
Q psy7433 208 V 208 (213)
Q Consensus 208 ~ 208 (213)
+
T Consensus 324 ~ 324 (393)
T d1sq9a_ 324 I 324 (393)
T ss_dssp E
T ss_pred E
Confidence 3
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.95 E-value=3e-26 Score=165.35 Aligned_cols=154 Identities=20% Similarity=0.305 Sum_probs=114.1
Q ss_pred cceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecc-cCCCCeeEEEecCCCCEEEEecCCCcee--
Q psy7433 46 ALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFN-AHESPVKCLAIDPHEEFFVTGAGDGDIK-- 122 (213)
Q Consensus 46 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~~~~i~-- 122 (213)
...+.+++|...|++++|+|++++|++|+.||.|++||+++++....+. .|...|++++|+|++.++ +++.|+.++
T Consensus 3 ~~~~~~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~~g~~~-~~~~d~~v~~~ 81 (299)
T d1nr0a2 3 SIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLF-TVSWDDHLKVV 81 (299)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEE-EEETTTEEEEE
T ss_pred ccceEcCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCCcEEEEEeeccceee-cccceeeEEEe
Confidence 4567889999999999999999999999999999999999998888774 578899999999998755 445566553
Q ss_pred -------------------------------------------------------eceEEEEEccCCceEEEecCCCcEE
Q psy7433 123 -------------------------------------------------------SPVKCLAIDPHEEFFVTGAGDGDIK 147 (213)
Q Consensus 123 -------------------------------------------------------~~v~~~~~~~~~~~l~~~~~dg~i~ 147 (213)
..+.+++|+|+++++++|+.||.|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~ 161 (299)
T d1nr0a2 82 PAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVH 161 (299)
T ss_dssp CSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEE
T ss_pred ccCCcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 2345555555555555555566666
Q ss_pred EEEccCCe-------------------------------------------eeeeecCCCCceeEEEecCCCeEEEEeCC
Q psy7433 148 VWSLSGNH-------------------------------------------LLYNFPGEHARSSFFKHIGQGVTQLHVDG 184 (213)
Q Consensus 148 v~d~~~~~-------------------------------------------~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 184 (213)
+||+++++ ....... ...|..+|++++|+|
T Consensus 162 ~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~-------~~~h~~~v~~l~~s~ 234 (299)
T d1nr0a2 162 VYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNS-------WTFHTAKVACVSWSP 234 (299)
T ss_dssp EEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCC-------CCCCSSCEEEEEECT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-------ccccccccccccccc
Confidence 66554332 2211110 112347899999999
Q ss_pred CC-eEEEEecCCcEEEEeCCCCcc
Q psy7433 185 GS-RLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 185 ~~-~l~s~~~d~~i~iw~~~~~~~ 207 (213)
++ +|++++.||.|++||+.+...
T Consensus 235 ~~~~l~sgs~dg~i~iwd~~~~~~ 258 (299)
T d1nr0a2 235 DNVRLATGSLDNSVIVWNMNKPSD 258 (299)
T ss_dssp TSSEEEEEETTSCEEEEETTCTTS
T ss_pred cccceEEEcCCCEEEEEECCCCCc
Confidence 65 699999999999999987643
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.95 E-value=1.5e-25 Score=167.91 Aligned_cols=192 Identities=13% Similarity=0.174 Sum_probs=146.0
Q ss_pred ccCceEEEEEeCC-----CCeEEEeeccCCCccEEEEeCCCcccc--------c-------ceeeeeeecCCceEEEEec
Q psy7433 6 HNKITSDFVFLGS-----CSLVATAGHSSESKNVCLWDSLLPQKK--------A-------LVQAFVCHDQGASSLVFAP 65 (213)
Q Consensus 6 h~~~v~~~~~~~~-----~~~l~~~g~~s~~~~i~iwd~~~~~~~--------~-------~~~~~~~~~~~v~~~~~~~ 65 (213)
+...+..++|.++ +.+++++ +.|+.+++|++...... . .......+...+.+++|+|
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~ 194 (393)
T d1sq9a_ 118 KKHSFWALKWGASNDRLLSHRLVAT---DVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISE 194 (393)
T ss_dssp GGSCEEEEEEECCC----CEEEEEE---ETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECT
T ss_pred CCCceEEEEEecCCCcccccEEEEE---cCCCcEEEEEeecCCcccceeeeeeccceecccceecccCCCCcEEEEEECC
Confidence 5566788888875 4578888 68999999997321100 0 0111112345688999999
Q ss_pred CCCEEEEEcCCCcEEEEeccCceEEEec------ccCCCCeeEEEecCCCCEEEEecCCCc---ee--------------
Q psy7433 66 QHQLLISAGKKGDICVIDLRQRVIRSRF------NAHESPVKCLAIDPHEEFFVTGAGDGD---IK-------------- 122 (213)
Q Consensus 66 ~~~~l~~~~~d~~v~iwd~~~~~~~~~~------~~~~~~i~~~~~~~~~~~l~~~~~~~~---i~-------------- 122 (213)
++ +|++|+.|+.|++||+++++++..+ .+|..+|.+++|+|++++|++++.|+. ++
T Consensus 195 dg-~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~ 273 (393)
T d1sq9a_ 195 RG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLS 273 (393)
T ss_dssp TS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEEC
T ss_pred CC-EEEEEeCCCcEEEEeecccccccccccccccccccceEEEcccccccceeeeecCCCCcceeeecccccceeeeeec
Confidence 87 8999999999999999998776544 457889999999999999999998874 22
Q ss_pred ----------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeE------EEe-----cCC
Q psy7433 123 ----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSF------FKH-----IGQ 175 (213)
Q Consensus 123 ----------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~------~~~-----~~~ 175 (213)
..|++++|+|++++|++++.|+.|++||+++++++.++.+|...... +.. ...
T Consensus 274 ~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g~~~~~l~gH~~~v~~~~~~~~~~~~~~~~~~~ 353 (393)
T d1sq9a_ 274 VPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEP 353 (393)
T ss_dssp BC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSC
T ss_pred cccccccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEEECCCCCEEEEECCcCCcccCCccEEEECCCCCEEEEc
Confidence 45899999999999999999999999999999999999988643211 111 124
Q ss_pred CeEEEEeCCC-----------CeEEEEecCCcEEEEe
Q psy7433 176 GVTQLHVDGG-----------SRLFSCGADGSMKVRQ 201 (213)
Q Consensus 176 ~v~~~~~~~~-----------~~l~s~~~d~~i~iw~ 201 (213)
.+.++.|.+. ..+++++.|+.|++|.
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ir~~~ 390 (393)
T d1sq9a_ 354 GVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFR 390 (393)
T ss_dssp CEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEE
T ss_pred ccceEEECccCceeccccCCCCEEEEEEcCCeEEEEe
Confidence 5777777541 2388999999999996
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.95 E-value=7.4e-26 Score=163.22 Aligned_cols=151 Identities=20% Similarity=0.370 Sum_probs=138.5
Q ss_pred ceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee----
Q psy7433 47 LVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK---- 122 (213)
Q Consensus 47 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~---- 122 (213)
....+++|.+.|++++|+|++++|++|+.||.|++||+++++.+..+..|...|.+++++|++..++++..++.+.
T Consensus 9 ~~~~L~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (317)
T d1vyhc1 9 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDF 88 (317)
T ss_dssp CSCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEET
T ss_pred ccEEEcCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCcEEEEeeecccccccccccccccccccc
Confidence 4457889999999999999999999999999999999999999999999999999999999999999999888764
Q ss_pred -------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eE
Q psy7433 123 -------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RL 188 (213)
Q Consensus 123 -------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l 188 (213)
..+.++.|+|+++.+++++.|+.+++||+++++....+..+. ..+.+++++|++ .|
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~l 158 (317)
T d1vyhc1 89 QGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHR----------EWVRMVRPNQDGTLI 158 (317)
T ss_dssp TSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCS----------SCEEEEEECTTSSEE
T ss_pred cccccccccccccccceeeeccCCCceEEeeccCcceeEeecccceeeeEEccCC----------CcceeeecccCCCEE
Confidence 678899999999999999999999999999999998888876 689999999864 68
Q ss_pred EEEecCCcEEEEeCCCCcc
Q psy7433 189 FSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 189 ~s~~~d~~i~iw~~~~~~~ 207 (213)
++++.|+.|++|++.+...
T Consensus 159 ~~~~~d~~v~~~~~~~~~~ 177 (317)
T d1vyhc1 159 ASCSNDQTVRVWVVATKEC 177 (317)
T ss_dssp EEEETTSCEEEEETTTCCE
T ss_pred EEEeCCCeEEEEeecccee
Confidence 9999999999999987654
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=3.9e-24 Score=152.60 Aligned_cols=178 Identities=17% Similarity=0.305 Sum_probs=112.8
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEE
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVI 82 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iw 82 (213)
+.+|...|+|++ +++++||++ +.|++|+|||+ .+.+++..+.+|...|.+++| ++++|++|+.|+.|++|
T Consensus 11 ~~~~~~~V~c~~--~d~~~l~sg---s~Dg~i~vWd~---~~~~~~~~l~~H~~~V~~v~~--~~~~l~s~s~D~~i~~~ 80 (293)
T d1p22a2 11 RSETSKGVYCLQ--YDDQKIVSG---LRDNTIKIWDK---NTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVW 80 (293)
T ss_dssp CCSSCCCEEEEE--CCSSEEEEE---ESSSCEEEEES---SSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEE
T ss_pred cCCCCCCEEEEE--EcCCEEEEE---eCCCeEEEEEC---CCCcEEEEEecCCCCEeeeec--ccceeeccccccccccc
Confidence 346778898865 579999999 68999999999 577888999999999999887 57799999999999999
Q ss_pred eccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee--------------------eceEEEEEccCCceEEEecC
Q psy7433 83 DLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK--------------------SPVKCLAIDPHEEFFVTGAG 142 (213)
Q Consensus 83 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~--------------------~~v~~~~~~~~~~~l~~~~~ 142 (213)
++..+............. ..+.+....++++..++.+. ..+..+.+. ...+++++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~s~ 156 (293)
T d1p22a2 81 DVNTGEMLNTLIHHCEAV--LHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASG 156 (293)
T ss_dssp ESSSCCEEEEECCCCSCE--EEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE--TTEEEEEET
T ss_pred cccccccccccccccccc--ccccccccceeecccccceeEeeccccccccccccccccccccccceec--ccccccccC
Confidence 998876555444322222 22333344555555555443 222222222 234555555
Q ss_pred CCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCC
Q psy7433 143 DGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 143 dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 205 (213)
|+.|++||+++++.+..+.++. ..+..+.+++ ..+++++.|+.|++||+.+.
T Consensus 157 d~~i~~~d~~~~~~~~~~~~~~----------~~v~~~~~~~-~~l~~~~~dg~i~i~d~~~~ 208 (293)
T d1p22a2 157 DRTIKVWNTSTCEFVRTLNGHK----------RGIACLQYRD-RLVVSGSSDNTIRLWDIECG 208 (293)
T ss_dssp TSEEEEEETTTCCEEEEEECCS----------SCEEEEEEET-TEEEEEETTSCEEEEETTTC
T ss_pred CCceeeecCCCCcEEEEEcccc----------cccccccCCC-CeEEEecCCCEEEEEecccc
Confidence 5566666655555555555443 3344444432 24555555555555555443
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.93 E-value=3.5e-24 Score=157.66 Aligned_cols=143 Identities=12% Similarity=0.005 Sum_probs=120.1
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEec
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDL 84 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~ 84 (213)
+|...|.+++|+|||+.|++++. ..+..|++||++ . .....+..|...+.+++|+|++++|++++.++.+.+|++
T Consensus 40 ~~~~~v~~~~~spDg~~l~~~~~-~~g~~v~v~d~~---~-~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~ 114 (360)
T d1k32a3 40 PEPLRIRYVRRGGDTKVAFIHGT-REGDFLGIYDYR---T-GKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDL 114 (360)
T ss_dssp SCCSCEEEEEECSSSEEEEEEEE-TTEEEEEEEETT---T-CCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred cCCCCEEEEEECCCCCEEEEEEc-CCCCEEEEEECC---C-CcEEEeeCCCceEEeeeecccccccceeccccccccccc
Confidence 68999999999999999988752 223479999983 3 344556778999999999999999999999999999999
Q ss_pred cCceEEEecccCCCCeeEEEecCCCCEEEEecCCCc----------ee----------------eceEEEEEccCCceEE
Q psy7433 85 RQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGD----------IK----------------SPVKCLAIDPHEEFFV 138 (213)
Q Consensus 85 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~----------i~----------------~~v~~~~~~~~~~~l~ 138 (213)
.+++....+..+...+.+++|+|++++|+.+..+.. +. ..+..+.|+|+|++|+
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~ 194 (360)
T d1k32a3 115 ETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLY 194 (360)
T ss_dssp TTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEE
T ss_pred cccceeeeeecccccccchhhccceeeeeeeccccccceeeccccceeeeccccCceeeecccccccccccccCCCCEEE
Confidence 999988888888899999999999999986543322 11 5578899999999999
Q ss_pred EecCCCcEEEEEcc
Q psy7433 139 TGAGDGDIKVWSLS 152 (213)
Q Consensus 139 ~~~~dg~i~v~d~~ 152 (213)
+++.++.+.+||..
T Consensus 195 ~~s~~~~~~~~d~~ 208 (360)
T d1k32a3 195 YLSYRSLDPSPDRV 208 (360)
T ss_dssp EEESCCCCCEECSS
T ss_pred EEeCCCceEccccc
Confidence 99999999999864
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.93 E-value=1.4e-24 Score=158.94 Aligned_cols=170 Identities=18% Similarity=0.335 Sum_probs=141.3
Q ss_pred EEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEec
Q psy7433 14 VFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRF 93 (213)
Q Consensus 14 ~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~ 93 (213)
.+.+++++++++ ..|+.|++||+ ...+.+.....+...+.++.|+|+++++++++.|+.|++||++++..+..+
T Consensus 166 ~~~~~~~~~~~~---~~d~~i~~~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~ 239 (355)
T d1nexb2 166 TVSGHGNIVVSG---SYDNTLIVWDV---AQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTL 239 (355)
T ss_dssp EEEEETTEEEEE---ETTSCEEEEET---TTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred ccccccceeeee---cccceeeeeec---ccccceeeeeccccccccccccccceeeecccccceEEeeecccccccccc
Confidence 345678899988 68999999999 556677777778889999999999999999999999999999999999999
Q ss_pred ccCCCCeeEEEecCCCCEEEEecCCCcee---------------eceEEE-EEccCCceEEEecCCCcEEEEEccCCeee
Q psy7433 94 NAHESPVKCLAIDPHEEFFVTGAGDGDIK---------------SPVKCL-AIDPHEEFFVTGAGDGDIKVWSLSGNHLL 157 (213)
Q Consensus 94 ~~~~~~i~~~~~~~~~~~l~~~~~~~~i~---------------~~v~~~-~~~~~~~~l~~~~~dg~i~v~d~~~~~~~ 157 (213)
.+|...|.++++++ ++|++++.|+.++ ..+.++ .++++++++++| .|+.|++||+++++++
T Consensus 240 ~~h~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g-~d~~i~vwd~~tg~~~ 316 (355)
T d1nexb2 240 QGHTALVGLLRLSD--KFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSG-SENQFNIYNLRSGKLV 316 (355)
T ss_dssp CCCSSCCCEEEECS--SEEEEECTTSEEEEEETTTCCEEEEEECTTCCCCCEEEECSSEEEEE-ETTEEEEEETTTCCBC
T ss_pred cccccccccccccc--ceeeeeecccccccccccccceecccccCCceEEEEEcCCCCEEEEE-eCCEEEEEECCCCCEE
Confidence 99999999999974 6899999999886 233343 456777766665 5899999999999887
Q ss_pred ee-ecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeC
Q psy7433 158 YN-FPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQL 202 (213)
Q Consensus 158 ~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~ 202 (213)
.. +..|. .+|.+++|+|+..+++++.||.++||.+
T Consensus 317 ~~~~~~~~----------~~V~~v~~~~~~~~~~~s~dg~~~l~~~ 352 (355)
T d1nexb2 317 HANILKDA----------DQIWSVNFKGKTLVAAVEKDGQSFLEIL 352 (355)
T ss_dssp CSCTTTTC----------SEEEEEEEETTEEEEEEESSSCEEEEEE
T ss_pred EEEecCCC----------CCEEEEEEcCCeEEEEEECCCcEEEEEE
Confidence 54 44444 6899999999877888999998776543
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=2.7e-23 Score=151.23 Aligned_cols=173 Identities=18% Similarity=0.296 Sum_probs=137.0
Q ss_pred EeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecc
Q psy7433 15 FLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFN 94 (213)
Q Consensus 15 ~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~ 94 (213)
..+....++++ +.++.|++||. .....+..+.+|...+.. +.+++.++++++.||.|++||++.++.+..+.
T Consensus 143 ~~~~~~~~~~~---~~d~~i~~~d~---~~~~~~~~~~~~~~~~~~--~~~~~~~l~s~~~dg~i~~~d~~~~~~~~~~~ 214 (342)
T d2ovrb2 143 VQYDGRRVVSG---AYDFMVKVWDP---ETETCLHTLQGHTNRVYS--LQFDGIHVVSGSLDTSIRVWDVETGNCIHTLT 214 (342)
T ss_dssp EEECSSCEEEE---ETTSCEEEEEG---GGTEEEEEECCCSSCEEE--EEECSSEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred eccccceeeee---cCCCeEEEeec---ccceeeEEEcCccccccc--ccCCCCEEEEEeCCCeEEEeecccceeeeEec
Confidence 34455677777 58999999998 566677777777665544 45578899999999999999999999999999
Q ss_pred cCCCCeeEEEecCCCCEEEEecCCCcee--------------------eceEEEEEccCCceEEEecCCCcEEEEEccCC
Q psy7433 95 AHESPVKCLAIDPHEEFFVTGAGDGDIK--------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGN 154 (213)
Q Consensus 95 ~~~~~i~~~~~~~~~~~l~~~~~~~~i~--------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~ 154 (213)
.|...+.++++++ ++|++++.|+.++ ..+.++.+ +++++++|+.||.|++||++++
T Consensus 215 ~~~~~v~~~~~~~--~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~s~s~Dg~i~iwd~~tg 290 (342)
T d2ovrb2 215 GHQSLTSGMELKD--NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF--NKNFVITSSDDGTVKLWDLKTG 290 (342)
T ss_dssp CCCSCEEEEEEET--TEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEE--CSSEEEEEETTSEEEEEETTTC
T ss_pred ccccceeEEecCC--CEEEEEcCCCEEEEEecccccccccccccceeeeceeeccc--CCCeeEEEcCCCEEEEEECCCC
Confidence 9999998888764 6999999999886 34444444 5679999999999999999999
Q ss_pred eeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEecCCc----EEEEeCCC
Q psy7433 155 HLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGADGS----MKVRQLPD 204 (213)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~d~~----i~iw~~~~ 204 (213)
+.+..+...... .+...|++++|+|++. |++|+.||+ |++||+..
T Consensus 291 ~~i~~~~~~~~~-----~~~~~v~~v~~s~~~~~la~g~~dGt~~~~l~~~Df~~ 340 (342)
T d2ovrb2 291 EFIRNLVTLESG-----GSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 340 (342)
T ss_dssp CEEEEEEECTTG-----GGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred CEEEEEecccCC-----CCCCCEEEEEECCCCCEEEEEeCCCCCeeEEEEEeCCC
Confidence 988877532211 1236799999999765 788888885 99999875
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=2.8e-23 Score=148.11 Aligned_cols=180 Identities=22% Similarity=0.326 Sum_probs=135.1
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCccccc-----------------------------------
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKA----------------------------------- 46 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~----------------------------------- 46 (213)
+|++|.++|++++| ++++|+++ +.|+.|++|++.......
T Consensus 50 ~l~~H~~~V~~v~~--~~~~l~s~---s~D~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (293)
T d1p22a2 50 ILTGHTGSVLCLQY--DERVIITG---SSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMAS 124 (293)
T ss_dssp EECCCSSCEEEEEC--CSSEEEEE---ETTSCEEEEESSSCCEEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSS
T ss_pred EEecCCCCEeeeec--ccceeecc---cccccccccccccccccccccccccccccccccccceeecccccceeEeeccc
Confidence 67899999999886 67899999 689999999985321100
Q ss_pred -----ceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCce
Q psy7433 47 -----LVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDI 121 (213)
Q Consensus 47 -----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i 121 (213)
....+..|...+..+.+ ....+++++.|+.+++||+++++.+..+.++...+..+.++ +..+++++.|+.+
T Consensus 125 ~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~s~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i 200 (293)
T d1p22a2 125 PTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTI 200 (293)
T ss_dssp SSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCE
T ss_pred ccccccccccccccccccccee--cccccccccCCCceeeecCCCCcEEEEEcccccccccccCC--CCeEEEecCCCEE
Confidence 01111223344444444 34578888999999999999999999998888888888776 5689999999988
Q ss_pred e---------------eceEEEEEccCCceEEEecCCCcEEEEEccCC---------eeeeeecCCCCceeEEEecCCCe
Q psy7433 122 K---------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGN---------HLLYNFPGEHARSSFFKHIGQGV 177 (213)
Q Consensus 122 ~---------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~---------~~~~~~~~~~~~~~~~~~~~~~v 177 (213)
+ .......+++++.+|++|+.||.|++||++.. ..+..+.+|. +.|
T Consensus 201 ~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~H~----------~~V 270 (293)
T d1p22a2 201 RLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHS----------GRV 270 (293)
T ss_dssp EEEETTTCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCS----------SCC
T ss_pred EEEecccceeeeeecccceeeeeccccceEEEEEcCCCEEEEEECCCCccccccCCceeeEEecCCC----------CCE
Confidence 6 11112346677889999999999999998643 2344555554 789
Q ss_pred EEEEeCCCCeEEEEecCCcEEEEe
Q psy7433 178 TQLHVDGGSRLFSCGADGSMKVRQ 201 (213)
Q Consensus 178 ~~~~~~~~~~l~s~~~d~~i~iw~ 201 (213)
++++|++ .+|+|++.||.|++||
T Consensus 271 ~~v~~d~-~~l~s~s~Dg~i~iWD 293 (293)
T d1p22a2 271 FRLQFDE-FQIVSSSHDDTILIWD 293 (293)
T ss_dssp CCEEECS-SCEEECCSSSEEEEEC
T ss_pred EEEEEcC-CEEEEEecCCEEEEeC
Confidence 9999964 5799999999999997
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.92 E-value=9.3e-24 Score=155.35 Aligned_cols=174 Identities=13% Similarity=0.105 Sum_probs=141.0
Q ss_pred EEEEEeC-CCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCC--CcEEEEeccCc
Q psy7433 11 SDFVFLG-SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKK--GDICVIDLRQR 87 (213)
Q Consensus 11 ~~~~~~~-~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--~~v~iwd~~~~ 87 (213)
.+-.||| ||+++|++ ..+.|++||++ .+..++ + .|...|.+++|+|+|++|++++.+ ..|++||++++
T Consensus 6 ~~~~fSP~dG~~~a~~----~~g~v~v~d~~---~~~~~~-~-~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~ 76 (360)
T d1k32a3 6 FAEDFSPLDGDLIAFV----SRGQAFIQDVS---GTYVLK-V-PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTG 76 (360)
T ss_dssp GEEEEEECGGGCEEEE----ETTEEEEECTT---SSBEEE-C-SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTC
T ss_pred hcccccCCCCCEEEEE----ECCeEEEEECC---CCcEEE-c-cCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCC
Confidence 4567999 99999998 46899999983 333333 3 588999999999999998876654 37999999887
Q ss_pred eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEe----------
Q psy7433 88 VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTG---------- 140 (213)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~---------- 140 (213)
+.. .+..+...+.+++|+|++++|++++.++.+. ..+.+++|+|+|++|+.+
T Consensus 77 ~~~-~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~ 155 (360)
T d1k32a3 77 KAE-KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDG 155 (360)
T ss_dssp CEE-ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCS
T ss_pred cEE-EeeCCCceEEeeeecccccccceeccccccccccccccceeeeeecccccccchhhccceeeeeeeccccccceee
Confidence 655 5667899999999999999999999999776 567889999999998854
Q ss_pred cCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCC
Q psy7433 141 AGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 141 ~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~ 205 (213)
..++.+++||+++++........ ..+..+.|+|++ +|++++.++.+++|+....
T Consensus 156 ~~~~~~~v~d~~~~~~~~~~~~~-----------~~~~~~~~spdg~~l~~~s~~~~~~~~d~~~~ 210 (360)
T d1k32a3 156 YVMQAIHVYDMEGRKIFAATTEN-----------SHDYAPAFDADSKNLYYLSYRSLDPSPDRVVL 210 (360)
T ss_dssp CCEEEEEEEETTTTEEEECSCSS-----------SBEEEEEECTTSCEEEEEESCCCCCEECSSSS
T ss_pred ccccceeeeccccCceeeecccc-----------cccccccccCCCCEEEEEeCCCceEccccccc
Confidence 34457899999988776554432 568889999975 5899999999999997654
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.91 E-value=2.5e-23 Score=149.06 Aligned_cols=78 Identities=10% Similarity=0.214 Sum_probs=65.0
Q ss_pred eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeee-ecCCCCceeEEEecCCCeEEEEeCCC-----------CeEEE
Q psy7433 123 SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYN-FPGEHARSSFFKHIGQGVTQLHVDGG-----------SRLFS 190 (213)
Q Consensus 123 ~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~-----------~~l~s 190 (213)
..+++++|+|++++|++|+.||.|++||+.+++.... +..|. ..|.+++|+|. .+|++
T Consensus 163 ~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~----------~~v~~~~~~p~~~~~~~~~~~~~~l~s 232 (287)
T d1pgua2 163 AKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRT----------SKINAISWKPAEKGANEEEIEEDLVAT 232 (287)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCS----------SCEEEEEECCCC------CCSCCEEEE
T ss_pred CceeEEEeccCccccccccccccccceeecccccccccccccc----------cccceeeecccccccccccCCCCeeEe
Confidence 6789999999999999999999999999998877654 44554 68999999863 35899
Q ss_pred EecCCcEEEEeCCCCccccc
Q psy7433 191 CGADGSMKVRQLPDRDAVVH 210 (213)
Q Consensus 191 ~~~d~~i~iw~~~~~~~~~~ 210 (213)
++.|+.|++||+.+....++
T Consensus 233 gs~D~~i~iw~~~~~~~~~~ 252 (287)
T d1pgua2 233 GSLDTNIFIYSVKRPMKIIK 252 (287)
T ss_dssp EETTSCEEEEESSCTTCCEE
T ss_pred ecCCCeEEEEECCCCCeEEE
Confidence 99999999999987555443
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.88 E-value=4.2e-20 Score=132.47 Aligned_cols=183 Identities=11% Similarity=0.139 Sum_probs=137.2
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEE-EEcCCCcEEEEeccC
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLI-SAGKKGDICVIDLRQ 86 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~v~iwd~~~ 86 (213)
..+..++|+|+|++|++++ +.++.|++||+ .+.+.+..+..+. .+..++|++++..++ ++..++.+.+|+..+
T Consensus 32 ~~p~~va~spdG~~l~v~~--~~~~~i~v~d~---~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (301)
T d1l0qa2 32 SNPMGAVISPDGTKVYVAN--AHSNDVSIIDT---ATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTS 105 (301)
T ss_dssp SSEEEEEECTTSSEEEEEE--GGGTEEEEEET---TTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred CCceEEEEeCCCCEEEEEE--CCCCEEEEEEC---CCCceeeeeeccc-cccccccccccccccccccccceeeeccccc
Confidence 4578999999999876543 57899999999 5666777776554 468999999988655 566778899999998
Q ss_pred ceEEEecccCCCCeeEEEecCCCCEEEEecC-CCcee-------------------------------------------
Q psy7433 87 RVIRSRFNAHESPVKCLAIDPHEEFFVTGAG-DGDIK------------------------------------------- 122 (213)
Q Consensus 87 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-~~~i~------------------------------------------- 122 (213)
++....+.. .....++.++|++..++.... +..+.
T Consensus 106 ~~~~~~~~~-~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (301)
T d1l0qa2 106 NTVAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISV 184 (301)
T ss_dssp TEEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred ceeeeeccc-cccceEEEeecCCCeeeeeeccccceeeeeccccceeeecccCCCceEEEeeccccceeeeccccccccc
Confidence 887776653 345667778887776654443 33221
Q ss_pred ---------------eceEEEEEccCCceEEEec---CCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCC
Q psy7433 123 ---------------SPVKCLAIDPHEEFFVTGA---GDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG 184 (213)
Q Consensus 123 ---------------~~v~~~~~~~~~~~l~~~~---~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 184 (213)
..+..++|+++++.++.+. .++.|++||+.+++....+..+ ..+.+++|+|
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~~~~~~~~~~-----------~~~~~va~sp 253 (301)
T d1l0qa2 185 IDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVG-----------PDPAGIAVTP 253 (301)
T ss_dssp EETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECC-----------SSEEEEEECT
T ss_pred ccccceeeeecccccCCcceeeccccccccccccccceeeeeeeeecCCCeEEEEEcCC-----------CCEEEEEEeC
Confidence 4567788999888666543 3467999999998888777654 4689999999
Q ss_pred CCe-E-EEEecCCcEEEEeCCCCccc
Q psy7433 185 GSR-L-FSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 185 ~~~-l-~s~~~d~~i~iw~~~~~~~~ 208 (213)
++. | ++++.|+.|++||+.+++.+
T Consensus 254 dg~~l~va~~~~~~i~v~D~~t~~~~ 279 (301)
T d1l0qa2 254 DGKKVYVALSFCNTVSVIDTATNTIT 279 (301)
T ss_dssp TSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCCEEEEEECCCCeEEEEECCCCeEE
Confidence 764 4 67778999999999988543
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.88 E-value=7.8e-21 Score=138.22 Aligned_cols=184 Identities=10% Similarity=0.051 Sum_probs=144.4
Q ss_pred ccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeee-----cCCceEEEEecCCCEEEEEc------
Q psy7433 6 HNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCH-----DQGASSLVFAPQHQLLISAG------ 74 (213)
Q Consensus 6 h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~------ 74 (213)
+...+.+++|+|||+++++++ +.++.|.+||+ .+++.+..+..+ ...+..++|+|++++++++.
T Consensus 32 ~~~~~~~i~~spDg~~l~v~~--~~~~~v~v~D~---~t~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~~~~~~ 106 (337)
T d1pbyb_ 32 AGPTPMVPMVAPGGRIAYATV--NKSESLVKIDL---VTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLE 106 (337)
T ss_dssp CTTCCCCEEECTTSSEEEEEE--TTTTEEEEEET---TTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEEC
T ss_pred CCCCccEEEECCCCCEEEEEE--CCCCeEEEEEC---CCCcEEEEEecCCCcccccceeeEEEcCCCcEEEEeecCCcce
Confidence 445688999999999875443 68899999999 456666665543 23456899999999988775
Q ss_pred ------CCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee--------------------------
Q psy7433 75 ------KKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-------------------------- 122 (213)
Q Consensus 75 ------~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-------------------------- 122 (213)
.+..+.+||..+++....+. ....+..++++|+++++++++.+..+.
T Consensus 107 ~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (337)
T d1pbyb_ 107 LTHFEVQPTRVALYDAETLSRRKAFE-APRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDV 185 (337)
T ss_dssp SSCEEECCCEEEEEETTTTEEEEEEE-CCSSCCCEEECTTSSCEEEESSSEEEEETTTTEEEEEECSTTTTTTTBCCCBC
T ss_pred eeeccccccceeeccccCCeEEEecc-ccCCceEEEEcCCCCEEEEEcCCcceeeeecCcEEEEeecCCccccceecCCc
Confidence 35788999999998888776 456688999999999999887665432
Q ss_pred -------------------------------------------------------eceEEEEEccCCceEEEecCCCcEE
Q psy7433 123 -------------------------------------------------------SPVKCLAIDPHEEFFVTGAGDGDIK 147 (213)
Q Consensus 123 -------------------------------------------------------~~v~~~~~~~~~~~l~~~~~dg~i~ 147 (213)
..+..+.++|++.+++.+ ++.|+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~ 263 (337)
T d1pbyb_ 186 LAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLE 263 (337)
T ss_dssp CCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEE
T ss_pred ceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcEEEEEecCCCcceEEEEecccceEEEEc--cccEE
Confidence 334556777777777665 47899
Q ss_pred EEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-eEEEEecCCcEEEEeCCCCccc
Q psy7433 148 VWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS-RLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 148 v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
+||+++++.+..+... ..+.+++|+|++ +|++++.|+.|++||..+.+.+
T Consensus 264 v~d~~~~~~~~~~~~~-----------~~~~~~~~s~dG~~l~v~~~~~~i~v~D~~t~~~v 314 (337)
T d1pbyb_ 264 SFDLEKNASIKRVPLP-----------HSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKK 314 (337)
T ss_dssp EEETTTTEEEEEEECS-----------SCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEE
T ss_pred EEECCCCcEEEEEcCC-----------CCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcEE
Confidence 9999999999888654 468899999976 5889999999999999987654
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.88 E-value=6.3e-22 Score=143.65 Aligned_cols=163 Identities=15% Similarity=0.223 Sum_probs=116.8
Q ss_pred cceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceE---EEecccCCCCeeEEEecCC-CCEEEEecCCCce
Q psy7433 46 ALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVI---RSRFNAHESPVKCLAIDPH-EEFFVTGAGDGDI 121 (213)
Q Consensus 46 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~---~~~~~~~~~~i~~~~~~~~-~~~l~~~~~~~~i 121 (213)
+.+...++|...|++++|+|++++|++|+.||+|++||++++.. +.....|..+|.+++|+|+ +..|++|+.|+.+
T Consensus 2 ~~v~~~~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v 81 (342)
T d1yfqa_ 2 QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEI 81 (342)
T ss_dssp EEEECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCE
T ss_pred CeEEcCCCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccce
Confidence 34556778999999999999999999999999999999976532 2233358999999999986 4589999999987
Q ss_pred e------------------------------------------------------------------eceEEEEEccCCc
Q psy7433 122 K------------------------------------------------------------------SPVKCLAIDPHEE 135 (213)
Q Consensus 122 ~------------------------------------------------------------------~~v~~~~~~~~~~ 135 (213)
+ .....+.+.+.+.
T Consensus 82 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (342)
T d1yfqa_ 82 LKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSS 161 (342)
T ss_dssp EEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSS
T ss_pred eeeecccccccccccccccccccccccccccccccccccccccceeeccccccceeeecccccccccceeeeeeeeccCC
Confidence 5 1223345566677
Q ss_pred eEEEecCCCcEEEEEccCCeeeeeec---C-----------CCCc-----------eeE---------------------
Q psy7433 136 FFVTGAGDGDIKVWSLSGNHLLYNFP---G-----------EHAR-----------SSF--------------------- 169 (213)
Q Consensus 136 ~l~~~~~dg~i~v~d~~~~~~~~~~~---~-----------~~~~-----------~~~--------------------- 169 (213)
.+++++.|+.|++||++......... . +... ...
T Consensus 162 ~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~~ 241 (342)
T d1yfqa_ 162 RLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCH 241 (342)
T ss_dssp EEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECC
T ss_pred ceeeecCCCcEEEEecccCcccceeeeecccccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeeccccceeeee
Confidence 88888888888888875432110000 0 0000 000
Q ss_pred -----EEecCCCeEEEEeCCC-CeEEEEecCCcEEEEeCCCCccc
Q psy7433 170 -----FKHIGQGVTQLHVDGG-SRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 170 -----~~~~~~~v~~~~~~~~-~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
...+...+++++|+|+ ++|++|+.||.|++||+.+++.+
T Consensus 242 ~~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~~l 286 (342)
T d1yfqa_ 242 RLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKI 286 (342)
T ss_dssp CCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEE
T ss_pred eeccCCCcccccceeEEecCCccEEEEECCCCEEEEEECCCCcEE
Confidence 0112346889999995 46999999999999999987654
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.88 E-value=4.2e-22 Score=150.57 Aligned_cols=201 Identities=9% Similarity=0.021 Sum_probs=134.2
Q ss_pred ccccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCccccc--ceeeeeeecCCceEEEEecCCCEEEEE-cCCCc
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKA--LVQAFVCHDQGASSLVFAPQHQLLISA-GKKGD 78 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~ 78 (213)
+|+.| ..+..++|+|||++|+++ +.|+.|++||+.+..... .+....+|...+.+++|+|+|++++++ ..++.
T Consensus 57 ~l~~g-~~~~~vafSPDGk~l~~~---~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~~~s~~~spDG~~l~v~~~~~~~ 132 (426)
T d1hzua2 57 VIDTG-YAVHISRMSASGRYLLVI---GRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQ 132 (426)
T ss_dssp EEECC-SSEEEEEECTTSCEEEEE---ETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSE
T ss_pred EEeCC-CCeeEEEECCCCCEEEEE---eCCCCEEEEEccCCceeEEEEEeCCCCCcceEEeeeecCCCCEEEEeecCCCe
Confidence 35555 458999999999999998 689999999994322111 122223566667778888999987554 57899
Q ss_pred EEEEeccCceEEEeccc-------------------------------------------------------CCCCeeEE
Q psy7433 79 ICVIDLRQRVIRSRFNA-------------------------------------------------------HESPVKCL 103 (213)
Q Consensus 79 v~iwd~~~~~~~~~~~~-------------------------------------------------------~~~~i~~~ 103 (213)
+.+||..+++....+.. +...+..+
T Consensus 133 v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (426)
T d1hzua2 133 FAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADG 212 (426)
T ss_dssp EEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECSSSSSCEEEEEECCSSEEEE
T ss_pred EEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCCeEEEEEeccccceeeEEeccCCccEee
Confidence 99999887654432211 11223456
Q ss_pred EecCCCCEEEEecCCCcee-------------------------------------------------------------
Q psy7433 104 AIDPHEEFFVTGAGDGDIK------------------------------------------------------------- 122 (213)
Q Consensus 104 ~~~~~~~~l~~~~~~~~i~------------------------------------------------------------- 122 (213)
.++|++++++++..+....
T Consensus 213 ~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~~~~~~~~~~~~ 292 (426)
T d1hzua2 213 GWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYA 292 (426)
T ss_dssp EECTTSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEEETTTEEEEEEECTTTCEEEEEECCTTTCTTTB
T ss_pred eECCCCcEEEeeeecccceeeeecccccEEEEeccCCcccccceeeeecCCCCceEEeccCCCceEEEeecccccccccc
Confidence 6777766665554333211
Q ss_pred -----------eceEEEEEccCCceEEE-------ecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCC
Q psy7433 123 -----------SPVKCLAIDPHEEFFVT-------GAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG 184 (213)
Q Consensus 123 -----------~~v~~~~~~~~~~~l~~-------~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 184 (213)
..+..++|+|++++|++ ++.+++|+|||+++++...++..+... .....+...+..++|+|
T Consensus 293 ~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~~~~~~~~-~~~~~~~~rv~~~~fSp 371 (426)
T d1hzua2 293 WKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEW-ADLGEGAKRVVQPEYNK 371 (426)
T ss_dssp TSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHH-HCCCSSCCCEEEEEECS
T ss_pred ceEeEEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEEEECCCCCcCeEEeccchh-cccCCCCccEEEEEECC
Confidence 34788999999999994 556789999999988766554321100 00001125699999999
Q ss_pred CCe-E-EEE----ecCCcEEEEeCCCCcc
Q psy7433 185 GSR-L-FSC----GADGSMKVRQLPDRDA 207 (213)
Q Consensus 185 ~~~-l-~s~----~~d~~i~iw~~~~~~~ 207 (213)
++. + +++ +.++.|+|||..+.+.
T Consensus 372 DGk~i~vs~~~~~~~~~~i~v~D~~T~k~ 400 (426)
T d1hzua2 372 RGDEVWFSVWNGKNDSSALVVVDDKTLKL 400 (426)
T ss_dssp SSSEEEEEECCCTTSCCEEEEEETTTTEE
T ss_pred CCCEEEEEEecCCCCCCeEEEEECCCCeE
Confidence 874 4 443 3578899999998854
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.88 E-value=3.4e-21 Score=140.64 Aligned_cols=178 Identities=14% Similarity=0.143 Sum_probs=133.5
Q ss_pred EEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeee-ecCCceEEEEecCCCEE-EEEcCCCcEEEEeccCceEE
Q psy7433 13 FVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVC-HDQGASSLVFAPQHQLL-ISAGKKGDICVIDLRQRVIR 90 (213)
Q Consensus 13 ~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l-~~~~~d~~v~iwd~~~~~~~ 90 (213)
++|++++++|+++ +.+++|.+||+ .+.+.+++++. +...+..++|+|||+++ +++..++.|.+||+.+++.+
T Consensus 2 ~a~~~~~~~l~~~---~~~~~v~v~D~---~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~ 75 (346)
T d1jmxb_ 2 PALKAGHEYMIVT---NYPNNLHVVDV---ASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNT 75 (346)
T ss_dssp CCCCTTCEEEEEE---ETTTEEEEEET---TTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred ccCCCCCcEEEEE---cCCCEEEEEEC---CCCCEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeee
Confidence 4688999999999 68999999999 56777877763 45568899999999987 45667899999999999887
Q ss_pred EecccCC------CCeeEEEecCCCCEEEEecCCC------------cee------------------------------
Q psy7433 91 SRFNAHE------SPVKCLAIDPHEEFFVTGAGDG------------DIK------------------------------ 122 (213)
Q Consensus 91 ~~~~~~~------~~i~~~~~~~~~~~l~~~~~~~------------~i~------------------------------ 122 (213)
..+.... ..+..++++|+++++++++.+. .+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (346)
T d1jmxb_ 76 FHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADD 155 (346)
T ss_dssp EEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTT
T ss_pred eeecccccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeeeccCceEEEEecCC
Confidence 7665332 2356789999998887665321 110
Q ss_pred --------------------------------------------------------------------------------
Q psy7433 123 -------------------------------------------------------------------------------- 122 (213)
Q Consensus 123 -------------------------------------------------------------------------------- 122 (213)
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (346)
T d1jmxb_ 156 GSLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSV 235 (346)
T ss_dssp SCEEEESSSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEE
T ss_pred CEEEEeCCcceEEEccCCCEEEEEecCCCccceEEeccccEEEEEecCCCceEeeeeeeeeccCceeEeeccCCceEEEE
Confidence
Q ss_pred ----------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC
Q psy7433 123 ----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS 186 (213)
Q Consensus 123 ----------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 186 (213)
..+..+.+++++.+++.... +.|.+||+.+++.+..+... ..+.+++|+|++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~v~d~~~~~~~~~~~~~-----------~~~~~va~s~DG 303 (346)
T d1jmxb_ 236 DLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVL-NRLAKYDLKQRKLIKAANLD-----------HTYYCVAFDKKG 303 (346)
T ss_dssp ETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEEE-SEEEEEETTTTEEEEEEECS-----------SCCCEEEECSSS
T ss_pred ECCCCceEEEEeecccceeEEEEEeCCCCEEEEecC-CeEEEEECCCCcEEEEEcCC-----------CCEEEEEEcCCC
Confidence 23344556666665555443 46888888887777766543 468899999975
Q ss_pred -eEEEEecCCcEEEEeCCCCccc
Q psy7433 187 -RLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 187 -~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
+|++++.|+.|++||..+.+.+
T Consensus 304 ~~l~v~~~d~~v~v~D~~t~~~i 326 (346)
T d1jmxb_ 304 DKLYLGGTFNDLAVFNPDTLEKV 326 (346)
T ss_dssp SCEEEESBSSEEEEEETTTTEEE
T ss_pred CEEEEEeCCCcEEEEECccCCEE
Confidence 5899999999999999987544
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.81 E-value=1.2e-18 Score=131.70 Aligned_cols=172 Identities=12% Similarity=0.098 Sum_probs=127.3
Q ss_pred CeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCce--EEEecc---
Q psy7433 20 SLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRV--IRSRFN--- 94 (213)
Q Consensus 20 ~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~--~~~~~~--- 94 (213)
-++++. +.+++|.|||. .+.+++..+..+ ..+..++|+|||+++++++.|+.+.+||+.+++ ....++
T Consensus 33 ~~~v~~---~d~g~v~v~D~---~t~~v~~~~~~g-~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~ 105 (432)
T d1qksa2 33 LFSVTL---RDAGQIALIDG---STYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS 105 (432)
T ss_dssp EEEEEE---TTTTEEEEEET---TTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS
T ss_pred EEEEEE---cCCCEEEEEEC---CCCcEEEEEeCC-CCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCC
Confidence 345777 89999999998 678888888866 468999999999999999999999999998765 333333
Q ss_pred cCCCCeeEEEecCCCCEE-EEecCCCcee----------------------------eceEEEEEccCCceE-EEecCCC
Q psy7433 95 AHESPVKCLAIDPHEEFF-VTGAGDGDIK----------------------------SPVKCLAIDPHEEFF-VTGAGDG 144 (213)
Q Consensus 95 ~~~~~i~~~~~~~~~~~l-~~~~~~~~i~----------------------------~~v~~~~~~~~~~~l-~~~~~dg 144 (213)
.+...+.+..|+|||+++ +++..++.+. .....+.++|+++.+ ++...++
T Consensus 106 ~~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~ 185 (432)
T d1qksa2 106 EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETG 185 (432)
T ss_dssp EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTT
T ss_pred CCCCeEEecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCC
Confidence 344456666788899986 5666677664 344567889998854 5667789
Q ss_pred cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEe-cCCcEEEEeCCCCcc
Q psy7433 145 DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCG-ADGSMKVRQLPDRDA 207 (213)
Q Consensus 145 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~-~d~~i~iw~~~~~~~ 207 (213)
.|.+||..+.+.......+. +..+..++++|+++ +++++ .++.+.++|..+.+.
T Consensus 186 ~i~~~d~~~~~~~~~~~i~~---------g~~~~~~~~spdg~~~~va~~~~~~v~v~d~~~~~~ 241 (432)
T d1qksa2 186 KILLVDYTDLNNLKTTEISA---------ERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKL 241 (432)
T ss_dssp EEEEEETTCSSEEEEEEEEC---------CSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEE
T ss_pred eEEEEEccCCCcceEEEEcc---------cCccccceECCCCCEEEEeccccceEEEeecccceE
Confidence 99999988765443322211 25688999999765 55554 566888999887644
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.81 E-value=2.7e-18 Score=124.65 Aligned_cols=113 Identities=10% Similarity=-0.026 Sum_probs=80.2
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcC-CCcEEEEe
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGK-KGDICVID 83 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~v~iwd 83 (213)
.|.+.+..++|+|||++|++++ ..++.|++|++..............+...+..++|+|+|++|++++. ++.+.+|+
T Consensus 34 ~~~~~v~~la~spDG~~L~v~~--~~d~~i~~~~i~~~~~~~~~~~~~~~~~~p~~l~~spDg~~l~v~~~~~~~v~~~~ 111 (333)
T d1ri6a_ 34 DVPGQVQPMVVSPDKRYLYVGV--RPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTR 111 (333)
T ss_dssp ECSSCCCCEEECTTSSEEEEEE--TTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred cCCCCEeEEEEeCCCCEEEEEE--CCCCeEEEEEEeCCCCcEEEeeecccCCCceEEEEcCCCCEEeecccCCCceeeec
Confidence 5778899999999999986664 57899999998532222122222234456788999999999988874 67899998
Q ss_pred ccCceEEEe--cccCCCCeeEEEecCCCCEEEEecCCC
Q psy7433 84 LRQRVIRSR--FNAHESPVKCLAIDPHEEFFVTGAGDG 119 (213)
Q Consensus 84 ~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~~~ 119 (213)
......... ...+...+.++.++|+++.+++++...
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~ 149 (333)
T d1ri6a_ 112 LEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQ 149 (333)
T ss_dssp EETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGG
T ss_pred cccccceecccccCCCccceEEEeeecceeeecccccc
Confidence 876644332 234556677888888888777665443
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.78 E-value=4e-17 Score=123.26 Aligned_cols=155 Identities=12% Similarity=0.020 Sum_probs=112.8
Q ss_pred cccccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccc--cceeeeeeecCCceEEEEecCCCEE-EEEcCCCcE
Q psy7433 3 YQCHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKK--ALVQAFVCHDQGASSLVFAPQHQLL-ISAGKKGDI 79 (213)
Q Consensus 3 l~~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~v 79 (213)
++.| ..+..++|+|||++++++ +.|+.|++||+.+.+.. ..+.....|.+.+.+..|+|||++| ++++.++.|
T Consensus 58 ~~~g-~~~~~v~fSpDG~~l~~~---s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~~s~~~SpDG~~l~vs~~~~~~v 133 (432)
T d1qksa2 58 LDTG-YAVHISRLSASGRYLFVI---GRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQY 133 (432)
T ss_dssp EECS-SCEEEEEECTTSCEEEEE---ETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEE
T ss_pred EeCC-CCeeEEEECCCCCEEEEE---cCCCCEEEEEeeCCCceEEEEEecCCCCCCeEEecccCCCCCEEEEEcCCCCeE
Confidence 4444 469999999999999998 68999999998532211 1222233566666677788999986 677789999
Q ss_pred EEEeccCceEEEeccc-----------CCCCeeEEEecCCCCEEEEe-cCCCcee------------------eceEEEE
Q psy7433 80 CVIDLRQRVIRSRFNA-----------HESPVKCLAIDPHEEFFVTG-AGDGDIK------------------SPVKCLA 129 (213)
Q Consensus 80 ~iwd~~~~~~~~~~~~-----------~~~~i~~~~~~~~~~~l~~~-~~~~~i~------------------~~v~~~~ 129 (213)
.+||..+++++..+.. +......+.++|++..++++ ..++.+. ..+..++
T Consensus 134 ~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~~~~~~~~~i~~g~~~~~~~ 213 (432)
T d1qksa2 134 VIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGG 213 (432)
T ss_dssp EEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEE
T ss_pred EEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCeEEEEEccCCCcceEEEEcccCccccce
Confidence 9999999988776543 23445678889988876544 4445443 4567899
Q ss_pred EccCCceEEEecC-CCcEEEEEccCCeeeeeec
Q psy7433 130 IDPHEEFFVTGAG-DGDIKVWSLSGNHLLYNFP 161 (213)
Q Consensus 130 ~~~~~~~l~~~~~-dg~i~v~d~~~~~~~~~~~ 161 (213)
|+|+|+++++++. ++.+.++|..+.+....+.
T Consensus 214 ~spdg~~~~va~~~~~~v~v~d~~~~~~~~~~~ 246 (432)
T d1qksa2 214 LDGSHRYFITAANARNKLVVIDTKEGKLVAIED 246 (432)
T ss_dssp ECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEE
T ss_pred ECCCCCEEEEeccccceEEEeecccceEEEEec
Confidence 9999997776665 5678999998877765554
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.77 E-value=5e-17 Score=117.78 Aligned_cols=133 Identities=13% Similarity=0.146 Sum_probs=103.3
Q ss_pred CeEEEeeccCCCccEEEEeCCCcccccceeeeeee--cCCceEEEEecCCCEEE-EEcCCCcEEEEeccCceEEEecccC
Q psy7433 20 SLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCH--DQGASSLVFAPQHQLLI-SAGKKGDICVIDLRQRVIRSRFNAH 96 (213)
Q Consensus 20 ~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~-~~~~d~~v~iwd~~~~~~~~~~~~~ 96 (213)
++++++ +.|++|.+||+ .+.+.+..+..+ ...+..++|+|+|++++ +++.++.|.+||+.+++.+..+..+
T Consensus 2 ~~~vt~---~~d~~v~v~D~---~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~ 75 (337)
T d1pbyb_ 2 DYILAP---ARPDKLVVIDT---EKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLS 75 (337)
T ss_dssp EEEEEE---ETTTEEEEEET---TTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECC
T ss_pred eEEEEE---cCCCEEEEEEC---CCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecC
Confidence 478888 68999999999 566777777643 34578999999999874 6678999999999999988877654
Q ss_pred C-----CCeeEEEecCCCCEEEEecCCCcee----------------------------eceEEEEEccCCceEEEecCC
Q psy7433 97 E-----SPVKCLAIDPHEEFFVTGAGDGDIK----------------------------SPVKCLAIDPHEEFFVTGAGD 143 (213)
Q Consensus 97 ~-----~~i~~~~~~~~~~~l~~~~~~~~i~----------------------------~~v~~~~~~~~~~~l~~~~~d 143 (213)
. ..+..++++|+++.++++..+.... ..+..++|+|+|+++++++.+
T Consensus 76 ~~~~~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 155 (337)
T d1pbyb_ 76 TPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRD 155 (337)
T ss_dssp BTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEESSS
T ss_pred CCcccccceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEeccccCCceEEEEcCCCCEEEEEcCC
Confidence 3 2456899999999988876543221 456789999999999988654
Q ss_pred CcEEEEEccCCeeeeee
Q psy7433 144 GDIKVWSLSGNHLLYNF 160 (213)
Q Consensus 144 g~i~v~d~~~~~~~~~~ 160 (213)
+.+||..+++....+
T Consensus 156 --~~~~d~~~~~~~~~~ 170 (337)
T d1pbyb_ 156 --LHVMDPEAGTLVEDK 170 (337)
T ss_dssp --EEEEETTTTEEEEEE
T ss_pred --cceeeeecCcEEEEe
Confidence 678998877655544
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=99.75 E-value=3.9e-16 Score=115.08 Aligned_cols=86 Identities=10% Similarity=-0.091 Sum_probs=65.2
Q ss_pred ccccCceEEEEEeCCCCeEEEeecc--CCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEc-------
Q psy7433 4 QCHNKITSDFVFLGSCSLVATAGHS--SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG------- 74 (213)
Q Consensus 4 ~~h~~~v~~~~~~~~~~~l~~~g~~--s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------- 74 (213)
..+.+++.+++++|+|+.++..... +..+.|.+||. .+.+.+..+..+.. ..++|+|||++|++++
T Consensus 17 ~~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~---~tg~~~~~~~~~~~--~~~a~SpDG~~l~va~~~~~~~~ 91 (373)
T d2madh_ 17 GAADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDA---GSGSILGHVNGGFL--PNPVAAHSGSEFALASTSFSRIA 91 (373)
T ss_pred ccCCCCccccccCCCCCEEEEEcccccCCCceEEEEEC---CCCCEEEEEeCCCC--ccEEEcCCCCEEEEEeecCCccc
Confidence 4578899999999999998765211 23457999997 56777777765443 4799999999998864
Q ss_pred ---CCCcEEEEeccCceEEEecc
Q psy7433 75 ---KKGDICVIDLRQRVIRSRFN 94 (213)
Q Consensus 75 ---~d~~v~iwd~~~~~~~~~~~ 94 (213)
.++.|.+||..+++.+..+.
T Consensus 92 ~~~~~~~v~v~D~~t~~~~~~~~ 114 (373)
T d2madh_ 92 KGKRTDYVEVFDPVTFLPIADIE 114 (373)
T ss_pred ccccceEEEEEECCCCcEEEEEe
Confidence 45789999999987766554
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.74 E-value=8.6e-17 Score=121.16 Aligned_cols=181 Identities=12% Similarity=0.097 Sum_probs=119.5
Q ss_pred eEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEE--Eecc---c
Q psy7433 21 LVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIR--SRFN---A 95 (213)
Q Consensus 21 ~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~--~~~~---~ 95 (213)
++++. +.|++|++||+ .+.+.+..++.+. .+..++|+|||++|++++.|+.|++||+.+++.. ..++ +
T Consensus 34 ~~V~~---~~dg~v~vwD~---~t~~~~~~l~~g~-~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~ 106 (426)
T d1hzua2 34 FSVTL---RDAGQIALVDG---DSKKIVKVIDTGY-AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIE 106 (426)
T ss_dssp EEEEE---TTTTEEEEEET---TTCSEEEEEECCS-SEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSE
T ss_pred EEEEE---cCCCEEEEEEC---CCCcEEEEEeCCC-CeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCC
Confidence 45666 78999999999 6788888888764 5899999999999999999999999999887533 2332 3
Q ss_pred CCCCeeEEEecCCCCEEEEec-CCCcee-----------------eceEEEEEccCCc-eEEEecCCCcEEEEEccCCee
Q psy7433 96 HESPVKCLAIDPHEEFFVTGA-GDGDIK-----------------SPVKCLAIDPHEE-FFVTGAGDGDIKVWSLSGNHL 156 (213)
Q Consensus 96 ~~~~i~~~~~~~~~~~l~~~~-~~~~i~-----------------~~v~~~~~~~~~~-~l~~~~~dg~i~v~d~~~~~~ 156 (213)
+...+.+++|+|||+++++++ .++.+. ..+..+.+.+++. ..++++.|+...++.......
T Consensus 107 ~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~ 186 (426)
T d1hzua2 107 ARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGK 186 (426)
T ss_dssp EEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTE
T ss_pred CcceEEeeeecCCCCEEEEeecCCCeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCCe
Confidence 445566778889999876655 555554 2223344555554 344555555555554433222
Q ss_pred eeeecCCCCc--eeEEEecCCCeEEEEeCCCCe-EE-EEecCCcEEEEeCCCCccc
Q psy7433 157 LYNFPGEHAR--SSFFKHIGQGVTQLHVDGGSR-LF-SCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 157 ~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~-l~-s~~~d~~i~iw~~~~~~~~ 208 (213)
+..+...... .......+..+..+.++|++. ++ +...+..+.+++..+.+..
T Consensus 187 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~ 242 (426)
T d1hzua2 187 VLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLS 242 (426)
T ss_dssp EEEEECSSSSSCEEEEEECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEE
T ss_pred EEEEEeccccceeeEEeccCCccEeeeECCCCcEEEeeeecccceeeeecccccEE
Confidence 2222222111 112334457889999998654 44 4446678999999877543
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.74 E-value=3.2e-15 Score=106.57 Aligned_cols=162 Identities=14% Similarity=0.204 Sum_probs=125.0
Q ss_pred CCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEE-EEcCCCcEEEEeccCceEEEecccCCCCeeEEEecC
Q psy7433 29 SESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLI-SAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDP 107 (213)
Q Consensus 29 s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~ 107 (213)
+.+++|.+||+ .+++.++.++. ...+..++|+|+|++|+ +++.++.|.+||+.+++.+..+..+. .+..+++++
T Consensus 9 ~~~~~v~v~D~---~t~~~~~~i~~-g~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~-~~~~~~~~~ 83 (301)
T d1l0qa2 9 SESDNISVIDV---TSNKVTATIPV-GSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSP 83 (301)
T ss_dssp TTTTEEEEEET---TTTEEEEEEEC-SSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECT
T ss_pred CCCCEEEEEEC---CCCeEEEEEEC-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeeeccc-ccccccccc
Confidence 68999999998 56677777764 35578999999999874 66788999999999999998887554 568899999
Q ss_pred CCCEEEEecCCC-cee----------------eceEEEEEccCCceEE-EecCCCcEEEEEccCCeeeeeecCCCCceeE
Q psy7433 108 HEEFFVTGAGDG-DIK----------------SPVKCLAIDPHEEFFV-TGAGDGDIKVWSLSGNHLLYNFPGEHARSSF 169 (213)
Q Consensus 108 ~~~~l~~~~~~~-~i~----------------~~v~~~~~~~~~~~l~-~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~ 169 (213)
++..+++.+.+. .+. ..+.++.|+|+++.++ ++..++.+.+|+..+......+..+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 157 (301)
T d1l0qa2 84 DGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG------ 157 (301)
T ss_dssp TSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC------
T ss_pred ccccccccccccceeeecccccceeeeeccccccceEEEeecCCCeeeeeeccccceeeeeccccceeeecccC------
Confidence 998776655443 332 5678899999998654 5566788999999999988888765
Q ss_pred EEecCCCeEEEEeCCCC-eEEEEec-CCcEEEEeCCCCc
Q psy7433 170 FKHIGQGVTQLHVDGGS-RLFSCGA-DGSMKVRQLPDRD 206 (213)
Q Consensus 170 ~~~~~~~v~~~~~~~~~-~l~s~~~-d~~i~iw~~~~~~ 206 (213)
..+..+.++|++ .+++++. ++.+.+|+.....
T Consensus 158 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (301)
T d1l0qa2 158 -----RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNS 191 (301)
T ss_dssp -----SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred -----CCceEEEeeccccceeeeccccccccccccccee
Confidence 357888999864 4555554 4567777776553
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.72 E-value=1.6e-16 Score=116.26 Aligned_cols=104 Identities=8% Similarity=-0.061 Sum_probs=73.8
Q ss_pred ceEEEEEeCCCCeEEEeec--cCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEc----------CC
Q psy7433 9 ITSDFVFLGSCSLVATAGH--SSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG----------KK 76 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~--~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d 76 (213)
++.-.+.+||++.++.... ......|.+||. .+++.+.++..+ ....++|+|+|++|++.+ .+
T Consensus 3 p~~~~a~spdg~~~~v~~~~~~~~~~~v~v~D~---~tg~~~~~~~~g--~~~~~a~SpDg~~l~v~~~~~~~~~~g~~d 77 (355)
T d2bbkh_ 3 PRILEAPAPDARRVYVNDPAHFAAVTQQFVIDG---EAGRVIGMIDGG--FLPNPVVADDGSFIAHASTVFSRIARGERT 77 (355)
T ss_dssp CCBCCCCCCCTTEEEEEECGGGCSSEEEEEEET---TTTEEEEEEEEC--SSCEEEECTTSSCEEEEEEEEEETTEEEEE
T ss_pred CcEeEeeCCCCCEEEEEecccCCCcCeEEEEEC---CCCcEEEEEECC--CCCceEEcCCCCEEEEEeCCCccccccCCC
Confidence 3334456899998876521 124567999998 567777777654 345799999999887643 47
Q ss_pred CcEEEEeccCceEEEecccCC-------CCeeEEEecCCCCEEEEecC
Q psy7433 77 GDICVIDLRQRVIRSRFNAHE-------SPVKCLAIDPHEEFFVTGAG 117 (213)
Q Consensus 77 ~~v~iwd~~~~~~~~~~~~~~-------~~i~~~~~~~~~~~l~~~~~ 117 (213)
+.|.+||+.+++.+..+..+. .....++|+|+++.++++..
T Consensus 78 ~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~ 125 (355)
T d2bbkh_ 78 DYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQF 125 (355)
T ss_dssp EEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEEC
T ss_pred CEEEEEECCCCCEEEEEecCCcceeecCCCCceEEEecCCCeeEEecC
Confidence 899999999998877664322 23456889999988776653
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.66 E-value=3e-15 Score=110.45 Aligned_cols=184 Identities=7% Similarity=-0.077 Sum_probs=124.3
Q ss_pred EEEEEeCCCCeEEEeec-------cCCCccEEEEeCCCcccccceeeeeeecC-------CceEEEEecCCCEEEEEc-C
Q psy7433 11 SDFVFLGSCSLVATAGH-------SSESKNVCLWDSLLPQKKALVQAFVCHDQ-------GASSLVFAPQHQLLISAG-K 75 (213)
Q Consensus 11 ~~~~~~~~~~~l~~~g~-------~s~~~~i~iwd~~~~~~~~~~~~~~~~~~-------~v~~~~~~~~~~~l~~~~-~ 75 (213)
..++|+|||+.|++... ++.++.|.+||. .+.+.+..+..+.. ....++|+|||++|+.+. .
T Consensus 68 ~~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~---~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~ 144 (368)
T d1mdah_ 68 SLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDP---VTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFG 144 (368)
T ss_dssp CEEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECT---TTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECS
T ss_pred CcceECCCCCEEEEEcccCccccccccCCeEEEEEC---CCCcEeeeecCCccceecccCCccceEECCCCCEEEEEeCC
Confidence 35889999999887531 134778999998 55666665554322 234689999999988775 5
Q ss_pred CCcEEEEeccCceEEEecccCCC-------CeeEEEecCCCCEEEEecCCCcee--------------------------
Q psy7433 76 KGDICVIDLRQRVIRSRFNAHES-------PVKCLAIDPHEEFFVTGAGDGDIK-------------------------- 122 (213)
Q Consensus 76 d~~v~iwd~~~~~~~~~~~~~~~-------~i~~~~~~~~~~~l~~~~~~~~i~-------------------------- 122 (213)
++.+.+||+.+++....+..+.. ....+.+++++..++....+....
T Consensus 145 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 224 (368)
T d1mdah_ 145 SSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGM 224 (368)
T ss_dssp SSCEEEEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTE
T ss_pred CCeEEEEECCCCcEeEEeeccCcceEccCCCceEEEEcCCCCEEEEEecCCceeeeeeecccccccccceeecccccCcE
Confidence 79999999999987776643322 223345555665544433222110
Q ss_pred ---------------------------------------eceEEEEEccCCceEEEecCC---------CcEEEEEccCC
Q psy7433 123 ---------------------------------------SPVKCLAIDPHEEFFVTGAGD---------GDIKVWSLSGN 154 (213)
Q Consensus 123 ---------------------------------------~~v~~~~~~~~~~~l~~~~~d---------g~i~v~d~~~~ 154 (213)
.....++++|++..++....+ ..|.+||..++
T Consensus 225 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~ 304 (368)
T d1mdah_ 225 LVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVG 304 (368)
T ss_dssp EEECBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSC
T ss_pred EEEecCCCEEEEeecCCceEEEeecccccceeeeeeecCCCceeEEEcCCCCEEEEEecCCCceeecCCceEEEEECCCC
Confidence 223457788887765544222 35889999988
Q ss_pred eeeeeecCCCCceeEEEecCCCeEEEEeCCCCe---EEEEecCCcEEEEeCCCCccc
Q psy7433 155 HLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR---LFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---l~s~~~d~~i~iw~~~~~~~~ 208 (213)
+.+..+... ..+..++|+|++. ++++..|+.|++||..+++.+
T Consensus 305 ~~~~~~~~~-----------~~~~~~a~spDG~~~ly~s~~~~~~v~v~D~~tgk~~ 350 (368)
T d1mdah_ 305 QTSGPISNG-----------HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQ 350 (368)
T ss_dssp CEEECCEEE-----------EEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEE
T ss_pred cEeEEecCC-----------CceeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEE
Confidence 887777543 4688899999753 466778899999999988643
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.65 E-value=1.4e-14 Score=104.76 Aligned_cols=177 Identities=14% Similarity=0.170 Sum_probs=116.3
Q ss_pred EEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEE-cCCCcEEEEeccCceEEEe---cccCC
Q psy7433 22 VATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISA-GKKGDICVIDLRQRVIRSR---FNAHE 97 (213)
Q Consensus 22 l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~v~iwd~~~~~~~~~---~~~~~ 97 (213)
++++ +.+++|++|+++.......++. ..+.+.+..++|+|||++|+++ ..|+.|.+|++........ .....
T Consensus 7 ~v~~---~~~~~I~v~~~~~~~~l~~~~~-~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~ 82 (333)
T d1ri6a_ 7 YIAS---PESQQIHVWNLNHEGALTLTQV-VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP 82 (333)
T ss_dssp EEEE---GGGTEEEEEEECTTSCEEEEEE-EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS
T ss_pred EEEC---CCCCcEEEEEEcCCCCeEEEEE-EcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccC
Confidence 4555 6899999999853222233333 3577889999999999988554 5589999999976532211 12244
Q ss_pred CCeeEEEecCCCCEEEEecCCC-cee-------------------eceEEEEEccCCceEEEecC-CCcEEEEEccCCee
Q psy7433 98 SPVKCLAIDPHEEFFVTGAGDG-DIK-------------------SPVKCLAIDPHEEFFVTGAG-DGDIKVWSLSGNHL 156 (213)
Q Consensus 98 ~~i~~~~~~~~~~~l~~~~~~~-~i~-------------------~~v~~~~~~~~~~~l~~~~~-dg~i~v~d~~~~~~ 156 (213)
..+..++|+|+++++++++.++ .+. ..+.++.++|++++++.++. +..|.+|+......
T Consensus 83 ~~p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~~ 162 (333)
T d1ri6a_ 83 GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGH 162 (333)
T ss_dssp SCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSC
T ss_pred CCceEEEEcCCCCEEeecccCCCceeeeccccccceecccccCCCccceEEEeeecceeeeccccccceeeEEEeccCCc
Confidence 5577899999999999887644 443 45677899999997777664 46799999865432
Q ss_pred eeeecCCCCceeEEEecCCCeEEEEeCCCCe--EEEEecCCcEEEEeCCCCc
Q psy7433 157 LYNFPGEHARSSFFKHIGQGVTQLHVDGGSR--LFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--l~s~~~d~~i~iw~~~~~~ 206 (213)
........ .....+.....+++++++. +.+....+...+|++....
T Consensus 163 ~~~~~~~~----~~~~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 210 (333)
T d1ri6a_ 163 LVAQDPAE----VTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPH 210 (333)
T ss_dssp EEEEEEEE----EECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTT
T ss_pred ceeeecee----eeeecCCCccEEEEeccceeEEeeccccCceEEEeecccc
Confidence 22111100 0001124578899998654 3444566778888876543
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.53 E-value=6.9e-14 Score=101.31 Aligned_cols=137 Identities=12% Similarity=0.122 Sum_probs=102.5
Q ss_pred EEEecCCCEEEEEcCCCcEEEEeccCceEEEeccc-CCCCeeEEEecCCCCEEEE-ecCCCcee----------------
Q psy7433 61 LVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNA-HESPVKCLAIDPHEEFFVT-GAGDGDIK---------------- 122 (213)
Q Consensus 61 ~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~-~~~~~~i~---------------- 122 (213)
++|++++++|++++.++.|.+||+.+++.+..++. +...+.+++|+||++++++ +..++.+.
T Consensus 2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~~ 81 (346)
T d1jmxb_ 2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLS 81 (346)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESC
T ss_pred ccCCCCCcEEEEEcCCCEEEEEECCCCCEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeeccc
Confidence 46889999999999999999999999999988763 4566889999999998754 55677665
Q ss_pred -------eceEEEEEccCCceEEEec------------CCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeC
Q psy7433 123 -------SPVKCLAIDPHEEFFVTGA------------GDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVD 183 (213)
Q Consensus 123 -------~~v~~~~~~~~~~~l~~~~------------~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 183 (213)
..+..++|+|||+++++++ .++.+.+||..+++....+..+.. +..+..+.++
T Consensus 82 ~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~ 153 (346)
T d1jmxb_ 82 SVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM--------PRQVYLMRAA 153 (346)
T ss_dssp CSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC--------CSSCCCEEEC
T ss_pred ccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeeec--------cCceEEEEec
Confidence 3456899999999887775 467788888877665444332211 1356667777
Q ss_pred CCCeEEEEecCCcEEEEeCCCCcc
Q psy7433 184 GGSRLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 184 ~~~~l~s~~~d~~i~iw~~~~~~~ 207 (213)
++++++..+ +.+.+|++.+++.
T Consensus 154 ~~~~~~~~~--~~~~~~~~~~~~~ 175 (346)
T d1jmxb_ 154 DDGSLYVAG--PDIYKMDVKTGKY 175 (346)
T ss_dssp TTSCEEEES--SSEEEECTTTCCE
T ss_pred CCCEEEEeC--CcceEEEccCCCE
Confidence 777766553 4588899877643
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.44 E-value=6.8e-12 Score=91.23 Aligned_cols=81 Identities=15% Similarity=0.150 Sum_probs=55.6
Q ss_pred eEEEEEeCCCCeEEEeec-------cCCCccEEEEeCCCcccccceeeeeeec-------CCceEEEEecCCCEEEEEc-
Q psy7433 10 TSDFVFLGSCSLVATAGH-------SSESKNVCLWDSLLPQKKALVQAFVCHD-------QGASSLVFAPQHQLLISAG- 74 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~-------~s~~~~i~iwd~~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~~- 74 (213)
...++|+|||++|++.+. +..++.|++||. .+.+.+..+..+. .....++|+|++++++.++
T Consensus 49 ~~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~---~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~ 125 (355)
T d2bbkh_ 49 LPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDP---VTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQF 125 (355)
T ss_dssp SCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT---TTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEEC
T ss_pred CCceEEcCCCCEEEEEeCCCccccccCCCCEEEEEEC---CCCCEEEEEecCCcceeecCCCCceEEEecCCCeeEEecC
Confidence 346899999998886521 024789999999 4555555544322 2345689999999877654
Q ss_pred -CCCcEEEEeccCceEEEec
Q psy7433 75 -KKGDICVIDLRQRVIRSRF 93 (213)
Q Consensus 75 -~d~~v~iwd~~~~~~~~~~ 93 (213)
.+..+.+|+..+++.+..+
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~ 145 (355)
T d2bbkh_ 126 SPAPAVGVVDLEGKAFKRML 145 (355)
T ss_dssp SSSCEEEEEETTTTEEEEEE
T ss_pred CCCceeeeeecCCCcEeeEE
Confidence 4567889999887655443
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.37 E-value=8.2e-12 Score=94.65 Aligned_cols=113 Identities=12% Similarity=0.033 Sum_probs=84.9
Q ss_pred ccccccCceEEEEEeCCCCeEEEeec------cCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcC
Q psy7433 2 TYQCHNKITSDFVFLGSCSLVATAGH------SSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGK 75 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~~~l~~~g~------~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 75 (213)
+|..|...|.++.|+|||++|+.+.. -+.++.+.+||+. .+ .+..+..+...+..+.|||+|+.+|.. .
T Consensus 56 ~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~---~~-~~~~l~~~~~~~~~~~~SPDG~~ia~~-~ 130 (470)
T d2bgra1 56 TFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLN---KR-QLITEERIPNNTQWVTWSPVGHKLAYV-W 130 (470)
T ss_dssp TTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT---TT-EECCSSCCCTTEEEEEECSSTTCEEEE-E
T ss_pred hhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEECC---CC-cccccccCCccccccccccCcceeeEe-e
Confidence 46678889999999999999998721 0125678999983 33 344566788889999999999999986 4
Q ss_pred CCcEEEEeccCceEEEecccC------------------CCCeeEEEecCCCCEEEEecCCC
Q psy7433 76 KGDICVIDLRQRVIRSRFNAH------------------ESPVKCLAIDPHEEFFVTGAGDG 119 (213)
Q Consensus 76 d~~v~iwd~~~~~~~~~~~~~------------------~~~i~~~~~~~~~~~l~~~~~~~ 119 (213)
++.+.+|+..+++..+..... .+....+.|+|||+.|+....|.
T Consensus 131 ~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~d~ 192 (470)
T d2bgra1 131 NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFND 192 (470)
T ss_dssp TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEEC
T ss_pred cccceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCccccEECCCCCccceeEecC
Confidence 678999999988765543221 22345688999999999886554
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.36 E-value=2e-12 Score=98.06 Aligned_cols=134 Identities=9% Similarity=0.135 Sum_probs=96.2
Q ss_pred EEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccce--eeeeeecCCceEEEEecCCCEEEEEc---------CCCcE
Q psy7433 11 SDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALV--QAFVCHDQGASSLVFAPQHQLLISAG---------KKGDI 79 (213)
Q Consensus 11 ~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~---------~d~~v 79 (213)
..+.|.++++++.. .++.+.+||+.+......+ ..+..+...|.++.||||+++|+.++ .++.+
T Consensus 20 ~~~~W~~d~~~~~~-----~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~ 94 (470)
T d2bgra1 20 YSLRWISDHEYLYK-----QENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASY 94 (470)
T ss_dssp CCCEECSSSEEEEE-----SSSCEEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEE
T ss_pred cCCEeCCCCEEEEE-----cCCcEEEEECCCCCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceE
Confidence 35789999987764 4788999999543322111 12334557799999999999999874 35678
Q ss_pred EEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee----------------------------------ece
Q psy7433 80 CVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----------------------------------SPV 125 (213)
Q Consensus 80 ~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------------------------~~v 125 (213)
.+||+.+++. ..+..+...+..+.|+|||+.++......... ...
T Consensus 95 ~l~d~~~~~~-~~l~~~~~~~~~~~~SPDG~~ia~~~~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~ 173 (470)
T d2bgra1 95 DIYDLNKRQL-ITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAY 173 (470)
T ss_dssp EEEETTTTEE-CCSSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSS
T ss_pred EEEECCCCcc-cccccCCccccccccccCcceeeEeecccceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCc
Confidence 9999998874 45777888999999999999998865543211 223
Q ss_pred EEEEEccCCceEEEecCCCc-EEEEE
Q psy7433 126 KCLAIDPHEEFFVTGAGDGD-IKVWS 150 (213)
Q Consensus 126 ~~~~~~~~~~~l~~~~~dg~-i~v~d 150 (213)
..+.|+|||++|+....|.. +..|+
T Consensus 174 ~~~~wSPDGk~ia~~~~d~~~v~~~~ 199 (470)
T d2bgra1 174 SALWWSPNGTFLAYAQFNDTEVPLIE 199 (470)
T ss_dssp BCEEECTTSSEEEEEEEECTTCCEEE
T ss_pred cccEECCCCCccceeEecCCcCceEE
Confidence 55789999999998865433 44443
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=99.34 E-value=5e-11 Score=88.69 Aligned_cols=190 Identities=11% Similarity=0.028 Sum_probs=126.4
Q ss_pred ccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeee-ecCCceEEEEecCCCE--EEEEcCCC-----
Q psy7433 6 HNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVC-HDQGASSLVFAPQHQL--LISAGKKG----- 77 (213)
Q Consensus 6 h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~--l~~~~~d~----- 77 (213)
|.-........|||++|.... ..++.|.++|+ .+.+..+.+.- +......++|+|++++ ++..+.+.
T Consensus 70 hhP~~s~t~gtpDGr~lfV~d--~~~~rVavIDl---~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~ 144 (441)
T d1qnia2 70 HHPHISMTDGRYDGKYLFIND--KANTRVARIRL---DIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPN 144 (441)
T ss_dssp CCCEEEEETTEEEEEEEEEEE--TTTTEEEEEET---TTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSC
T ss_pred cCCCcceecccCCCCEEEEEc--CCCCEEEEEEC---CCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccC
Confidence 444555566689999987775 57889999999 45555554432 3567889999999984 44443321
Q ss_pred ------------cEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------------
Q psy7433 78 ------------DICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK----------------------- 122 (213)
Q Consensus 78 ------------~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------------- 122 (213)
.+..+|..+.+...++.. ......+.++|+++++++.+.+..-.
T Consensus 145 dg~~~~~~~~~~~~~~iD~~t~~v~~qI~v-~~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~ 223 (441)
T d1qnia2 145 DGTDFSLDNSYTMFTAIDAETMDVAWQVIV-DGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIA 223 (441)
T ss_dssp SSSCCCGGGEEEEEEEEETTTCSEEEEEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHH
T ss_pred cccccccccccceEEeecCccceeeEEEec-CCCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceE
Confidence 235578888777666653 34578899999999988877653210
Q ss_pred ----------------------------------eceEEEEEccCCceE-EEecCCCcEEEEEccCCeeeeeecCCCCce
Q psy7433 123 ----------------------------------SPVKCLAIDPHEEFF-VTGAGDGDIKVWSLSGNHLLYNFPGEHARS 167 (213)
Q Consensus 123 ----------------------------------~~v~~~~~~~~~~~l-~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~ 167 (213)
.....+.++|||+++ +++..+++|.|||+.+.... +.......
T Consensus 224 ~~~~dGk~~~v~~~~v~vvd~~~~~~v~~~IPvgksPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~--~~~~~~~~ 301 (441)
T d1qnia2 224 AAVKAGNFKTIGDSKVPVVDGRGESEFTRYIPVPKNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDL--FEDKIELR 301 (441)
T ss_dssp HHHHTTCCBCCTTCCCCEEECSSSCSSEEEECCBSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHH--TTTSSCGG
T ss_pred EEecCCCEEEeCCCCcEEEEcccCCceEEEEeCCCCccCceECCCCCEEEEeCCcCCcEEEEEeehhhhH--hhccCCcc
Confidence 446779999999976 45678899999999753221 11111000
Q ss_pred ---eEEEecCCCeEEEEeCCCCe-EEEEecCCcEEEEeCC
Q psy7433 168 ---SFFKHIGQGVTQLHVDGGSR-LFSCGADGSMKVRQLP 203 (213)
Q Consensus 168 ---~~~~~~~~~v~~~~~~~~~~-l~s~~~d~~i~iw~~~ 203 (213)
......+-.....+|++++. +.+...|..|..|++.
T Consensus 302 ~~~~~~~~~glgplh~~fd~~g~~yts~~~ds~v~kw~~~ 341 (441)
T d1qnia2 302 DTIVAEPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIA 341 (441)
T ss_dssp GGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEHH
T ss_pred eEEEeecccccCcccceecCCceEEEcccccceEEEeccc
Confidence 00111123455668888776 6677789999999974
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=99.33 E-value=5.2e-10 Score=81.73 Aligned_cols=154 Identities=7% Similarity=-0.010 Sum_probs=98.9
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeee------cCCceEEEEecCCCEEEEEcCCCc
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCH------DQGASSLVFAPQHQLLISAGKKGD 78 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~d~~ 78 (213)
.+.....++.++|+++.+.... +.|+.+.+|+.. ..........+ ........+++++. ++..+.++.
T Consensus 162 ~~~~~~~~~~~s~~g~~~~v~~--~~dg~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 235 (373)
T d2madh_ 162 QLLSSPTCYHIHPGAPSTFYLL--CAQGGLAKTDHA---GGAAGAGLVGAMLTAAQNLLTQPAQANKSGR-IVWPVYSGK 235 (373)
T ss_pred EEeccceeEEEecCCCcEEEEE--cCCCeEEEEEcC---CceeeEEEeeeccccCccceeeeEEECCCce-EEEecCCce
Confidence 3445567888999987654333 689999999984 33333332221 11223445555554 445567889
Q ss_pred EEEEeccCceEEEe--cccC----------CCCeeEEEecCCCCEEEEecCCC----------cee--------------
Q psy7433 79 ICVIDLRQRVIRSR--FNAH----------ESPVKCLAIDPHEEFFVTGAGDG----------DIK-------------- 122 (213)
Q Consensus 79 v~iwd~~~~~~~~~--~~~~----------~~~i~~~~~~~~~~~l~~~~~~~----------~i~-------------- 122 (213)
+.+|+..+...... .... ......++++|++..++....++ .+.
T Consensus 236 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~~ 315 (373)
T d2madh_ 236 ILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS 315 (373)
T ss_pred EEEEEcCCCeEEEEEeeccccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEEECCCCcEEEEec
Confidence 99999887643221 1111 12334566667666555443322 221
Q ss_pred --eceEEEEEccCCc--eEEEecCCCcEEEEEccCCeeeeeecCCC
Q psy7433 123 --SPVKCLAIDPHEE--FFVTGAGDGDIKVWSLSGNHLLYNFPGEH 164 (213)
Q Consensus 123 --~~v~~~~~~~~~~--~l~~~~~dg~i~v~d~~~~~~~~~~~~~~ 164 (213)
..+..++|+|||+ ++++++.|+.|++||+.+++.+.++..+.
T Consensus 316 ~~~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~~~~~~~g 361 (373)
T d2madh_ 316 LGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVELG 361 (373)
T ss_pred CCCCeeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEECCCC
Confidence 5678899999998 45678899999999999999999998654
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=99.23 E-value=1.4e-10 Score=86.19 Aligned_cols=148 Identities=7% Similarity=-0.013 Sum_probs=91.4
Q ss_pred ceEEEEecCCCEEEEE-cCCCcEEEEeccCceEEEeccc-CCCCeeEEEecCCCCE--EEEecCCCc-------e-----
Q psy7433 58 ASSLVFAPQHQLLISA-GKKGDICVIDLRQRVIRSRFNA-HESPVKCLAIDPHEEF--FVTGAGDGD-------I----- 121 (213)
Q Consensus 58 v~~~~~~~~~~~l~~~-~~d~~v~iwd~~~~~~~~~~~~-~~~~i~~~~~~~~~~~--l~~~~~~~~-------i----- 121 (213)
.....++|||++|++. ..+..|.++|+++++....+.. ....+..++|+|+++. ++..+++.. .
T Consensus 74 ~s~t~gtpDGr~lfV~d~~~~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~ 153 (441)
T d1qnia2 74 ISMTDGRYDGKYLFINDKANTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDN 153 (441)
T ss_dssp EEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGG
T ss_pred cceecccCCCCEEEEEcCCCCEEEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCccccccccc
Confidence 3444457899988665 4678999999999988776542 4667899999999984 444333321 0
Q ss_pred -------e--------------eceEEEEEccCCceEEEecCCC---------------cEEEEEcc-------CCeee-
Q psy7433 122 -------K--------------SPVKCLAIDPHEEFFVTGAGDG---------------DIKVWSLS-------GNHLL- 157 (213)
Q Consensus 122 -------~--------------~~v~~~~~~~~~~~l~~~~~dg---------------~i~v~d~~-------~~~~~- 157 (213)
. ..+..+.|+|+|+++++++.+. .|.+.+.. .++..
T Consensus 154 ~~~~~~~iD~~t~~v~~qI~v~~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~dGk~~~ 233 (441)
T d1qnia2 154 SYTMFTAIDAETMDVAWQVIVDGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKT 233 (441)
T ss_dssp EEEEEEEEETTTCSEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHTTCCBC
T ss_pred ccceEEeecCccceeeEEEecCCCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEEecCCCEEE
Confidence 0 4567899999999888776542 12222211 01000
Q ss_pred ------eeecC-CCCceeEEEecCCCeEEEEeCCCCe--EEEEecCCcEEEEeCCCC
Q psy7433 158 ------YNFPG-EHARSSFFKHIGQGVTQLHVDGGSR--LFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 158 ------~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~--l~s~~~d~~i~iw~~~~~ 205 (213)
..+.. ........-+.+.....+.++|++. ++++..++.|.+||+.+.
T Consensus 234 v~~~~v~vvd~~~~~~v~~~IPvgksPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~ 290 (441)
T d1qnia2 234 IGDSKVPVVDGRGESEFTRYIPVPKNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKL 290 (441)
T ss_dssp CTTCCCCEEECSSSCSSEEEECCBSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGH
T ss_pred eCCCCcEEEEcccCCceEEEEeCCCCccCceECCCCCEEEEeCCcCCcEEEEEeehh
Confidence 00000 0011111122234567789999775 466778999999998753
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.20 E-value=1.6e-10 Score=84.67 Aligned_cols=163 Identities=8% Similarity=-0.067 Sum_probs=102.7
Q ss_pred ccCceEEEEEeCCCCe--EEEeeccCCCcc--EEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEc-------
Q psy7433 6 HNKITSDFVFLGSCSL--VATAGHSSESKN--VCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG------- 74 (213)
Q Consensus 6 h~~~v~~~~~~~~~~~--l~~~g~~s~~~~--i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------- 74 (213)
+.++...++..++++. ++... ..++. |.+||. ...+.+..+..+.. ..++|+|+|+.|+..+
T Consensus 18 ~~g~~~~~a~~~~~~~~~v~~~~--~~~g~~~~~~~d~---~~~~~~~~~~~~~~--~~~a~spDg~~i~~~~~~~~~~~ 90 (368)
T d1mdah_ 18 SDGSSCDHGPGAISRRSHITLPA--YFAGTTENWVSCA---GCGVTLGHSLGAFL--SLAVAGHSGSDFALASTSFARSA 90 (368)
T ss_dssp CCCCCBCCCCCCCTTEEEEEECT--TTCSSEEEEEEET---TTTEEEEEEEECTT--CEEEECTTSSCEEEEEEEETTTT
T ss_pred cCCCccccccCCCCcceeEEeec--cCCCcceEEEEeC---CCCcEEEEEeCCCC--CcceECCCCCEEEEEcccCcccc
Confidence 4455566667777775 33322 34444 666676 56666666665544 4689999999888754
Q ss_pred ---CCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCceeeceEEEEEccCCceEEEec-CCCcEEEEE
Q psy7433 75 ---KKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPHEEFFVTGA-GDGDIKVWS 150 (213)
Q Consensus 75 ---~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~~~~l~~~~-~dg~i~v~d 150 (213)
.|+.|.+||..+++.+..+..+.......-..| ..++|+|||+++++++ .++.+.+||
T Consensus 91 ~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p------------------~~~a~SpDGk~l~va~~~~~~v~~~d 152 (368)
T d1mdah_ 91 KGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRV------------------HIIGNCASSACLLFFLFGSSAAAGLS 152 (368)
T ss_dssp SSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCT------------------TSEEECTTSSCEEEEECSSSCEEEEE
T ss_pred ccccCCeEEEEECCCCcEeeeecCCccceecccCCc------------------cceEECCCCCEEEEEeCCCCeEEEEE
Confidence 467899999999988877654333222111111 2356777778777665 568999999
Q ss_pred ccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCC
Q psy7433 151 LSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~ 205 (213)
+.+++....+..+... . +...+...+++.+.||.+.++++...
T Consensus 153 ~~~~~~~~~~~~~~~~----------~--~~~~~~~~~v~~~~Dg~~~~~~~~~~ 195 (368)
T d1mdah_ 153 VPGASDDQLTKSASCF----------H--IHPGAAATHYLGSCPASLAASDLAAA 195 (368)
T ss_dssp ETTTEEEEEEECSSCC----------C--CEEEETTEEECCCCTTSCEEEECCSS
T ss_pred CCCCcEeEEeeccCcc----------e--EccCCCceEEEEcCCCCEEEEEecCC
Confidence 9999988887765421 1 11112334555666777777766544
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.18 E-value=8.3e-09 Score=71.91 Aligned_cols=182 Identities=10% Similarity=0.057 Sum_probs=117.6
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCc
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR 87 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~ 87 (213)
....++++.++|+++++.. ...+.+..++.. .......... .......++++++++++++....+.+++++-.+.
T Consensus 14 ~~P~~vavd~dG~i~v~~~--~~~~~i~~~~~~--~~~~~~~~~~-~~~~p~gvav~~~g~i~v~d~~~~~i~~~~~~~~ 88 (260)
T d1rwia_ 14 LSPSGVAVDSAGNVYVTSE--GMYGRVVKLATG--STGTTVLPFN-GLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNN 88 (260)
T ss_dssp CCEEEEEECTTCCEEEEEC--SSSCEEEEEC------CEEECCCC-SCCSCCCEEECTTCCEEEEETTTEEEEECTTCSC
T ss_pred CCCCEEEEcCCCCEEEEEc--CCCCEEEEEcCC--CceEEEeccC-CccCceEEEEcCCCCEEEeeeeeceeeeeeeccc
Confidence 3468999999999777652 456777777752 1222222221 1234578899999998887777777777665555
Q ss_pred eEEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCCCcEEEEE
Q psy7433 88 VIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWS 150 (213)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d 150 (213)
..+.... .......+++.++++.+++-..+..+. .....++++|+++++++...++.|..+|
T Consensus 89 ~~~~~~~-~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d 167 (260)
T d1rwia_ 89 QTVLPFD-GLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLE 167 (260)
T ss_dssp CEECCCC-SCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEECCCCSCCSCCEEEECTTCCEEEEEGGGTEEEEEC
T ss_pred eeeeeee-eeeecccccccccceeEeeccccccccccccccceeeeeeecccCCcceeeecCCCCEeeeccccccccccc
Confidence 4443332 234578999999988776654444332 5667899999999888888888999999
Q ss_pred ccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEE-EEecCCcEEEEeCCCC
Q psy7433 151 LSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLF-SCGADGSMKVRQLPDR 205 (213)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~-s~~~d~~i~iw~~~~~ 205 (213)
.............- .....+++++++.|+ +....+.|..++....
T Consensus 168 ~~~~~~~~~~~~~~----------~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~ 213 (260)
T d1rwia_ 168 AESNNQVVLPFTDI----------TAPWGIAVDEAGTVYVTEHNTNQVVKLLAGST 213 (260)
T ss_dssp TTTCCEEECCCSSC----------CSEEEEEECTTCCEEEEETTTTEEEEECTTCS
T ss_pred cccceeeeeecccc----------CCCccceeeeeeeeeeeecCCCEEEEEeCCCC
Confidence 76543332221211 457889998876654 4445667777776543
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.17 E-value=6.6e-08 Score=67.93 Aligned_cols=137 Identities=8% Similarity=0.172 Sum_probs=90.7
Q ss_pred eEEEEecCCCEEEEEcCCCcEEEEeccCceEEEec--ccCCCCeeEEEecCCCCEEEEecCCCcee--------------
Q psy7433 59 SSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRF--NAHESPVKCLAIDPHEEFFVTGAGDGDIK-------------- 122 (213)
Q Consensus 59 ~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-------------- 122 (213)
..+++.++++++++....+.+.+++.. ++.+..+ ..+......+++.++++.+++....+.+.
T Consensus 117 ~~~avd~~G~i~v~~~~~~~~~~~~~~-g~~~~~~g~~~~~~~~~~i~~d~~g~i~v~d~~~~~V~~~d~~G~~~~~~g~ 195 (279)
T d1q7fa_ 117 RGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGG 195 (279)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCCEEEEESC
T ss_pred ceeccccCCcEEEEeeccceeeEeccC-CceeecccccccccccceeeeccceeEEeeeccccceeeeecCCceeeeecc
Confidence 345555555555555555555555533 3444443 22345667888888887777666555543
Q ss_pred ----eceEEEEEccCCceEEEecC-CCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcE
Q psy7433 123 ----SPVKCLAIDPHEEFFVTGAG-DGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSM 197 (213)
Q Consensus 123 ----~~v~~~~~~~~~~~l~~~~~-dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i 197 (213)
..+..++++++|+++++-.. ++.|.+|+ .+++.+..+..... ......+++.|++.|++...+..|
T Consensus 196 ~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~-~~G~~~~~~~~~~~--------~~~p~~vav~~dG~l~V~~~n~~v 266 (279)
T d1q7fa_ 196 EGITNYPIGVGINSNGEILIADNHNNFNLTIFT-QDGQLISALESKVK--------HAQCFDVALMDDGSVVLASKDYRL 266 (279)
T ss_dssp TTTSCSEEEEEECTTCCEEEEECSSSCEEEEEC-TTSCEEEEEEESSC--------CSCEEEEEEETTTEEEEEETTTEE
T ss_pred cccccCCcccccccCCeEEEEECCCCcEEEEEC-CCCCEEEEEeCCCC--------CCCEeEEEEeCCCcEEEEeCCCeE
Confidence 45788999999997776544 45799998 45776666543221 145788999999888888889999
Q ss_pred EEEeCCCC
Q psy7433 198 KVRQLPDR 205 (213)
Q Consensus 198 ~iw~~~~~ 205 (213)
++|.....
T Consensus 267 ~~fr~~~~ 274 (279)
T d1q7fa_ 267 YIYRYVQL 274 (279)
T ss_dssp EEEECSCC
T ss_pred EEEEeeee
Confidence 99998754
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=99.15 E-value=1.1e-08 Score=72.86 Aligned_cols=180 Identities=9% Similarity=0.005 Sum_probs=118.1
Q ss_pred ceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCc-
Q psy7433 9 ITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR- 87 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~- 87 (213)
.+..++++|||+++++. ..+++|..|+.. .. ...+......+.+++|+++|+++++...++.+..++....
T Consensus 29 ~~e~iAv~pdG~l~vt~---~~~~~I~~i~p~----g~-~~~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~ 100 (302)
T d2p4oa1 29 FLENLASAPDGTIFVTN---HEVGEIVSITPD----GN-QQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSD 100 (302)
T ss_dssp CEEEEEECTTSCEEEEE---TTTTEEEEECTT----CC-EEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTT
T ss_pred CcCCEEECCCCCEEEEe---CCCCEEEEEeCC----CC-EEEEEcCCCCcceEEEcCCCCeEEEecCCceEEEEEecccc
Confidence 47789999999999988 678988888852 22 2334445677899999999998888888888888877543
Q ss_pred -eEEEec-ccCCCCeeEEEecCCCCEEEEecCCCcee---------------------------eceEEEEEccCCceEE
Q psy7433 88 -VIRSRF-NAHESPVKCLAIDPHEEFFVTGAGDGDIK---------------------------SPVKCLAIDPHEEFFV 138 (213)
Q Consensus 88 -~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~~~~i~---------------------------~~v~~~~~~~~~~~l~ 138 (213)
...... .........+.+.++++.+++.+.++.+. .....+.++. +.+++
T Consensus 101 ~~~~~~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~~-~~l~~ 179 (302)
T d2p4oa1 101 GTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFG-NFLYV 179 (302)
T ss_dssp SCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEET-TEEEE
T ss_pred cceeeccccCCccccceeEEccCCCEEeeccccccceeeeccCCcceeEecCCccceeeccCcccccccccccC-Cceee
Confidence 211111 12345678899999998888877666553 2334455543 34566
Q ss_pred EecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEecCCcEEEEeCCCC
Q psy7433 139 TGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGADGSMKVRQLPDR 205 (213)
Q Consensus 139 ~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~d~~i~iw~~~~~ 205 (213)
+.+..+.|..++............ .........+++++++. +++...++.|..++...+
T Consensus 180 ~~~~~~~i~~~~~~~~~~~~~~~~--------~~~~~~pdgia~d~dG~l~va~~~~~~V~~i~p~G~ 239 (302)
T d2p4oa1 180 SNTEKMLLLRIPVDSTDKPGEPEI--------FVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDRS 239 (302)
T ss_dssp EETTTTEEEEEEBCTTSCBCCCEE--------EEESCCCSSEEEBTTCCEEEECBTTCCEEEECTTCC
T ss_pred ecCCCCeEEecccccccccccccc--------ccCCCCCcceEECCCCCEEEEEcCCCcEEEECCCCC
Confidence 667778888888754322211110 00113456688988765 455556788888876544
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.09 E-value=3.2e-08 Score=68.88 Aligned_cols=179 Identities=11% Similarity=0.071 Sum_probs=115.5
Q ss_pred ceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCce
Q psy7433 9 ITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRV 88 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~ 88 (213)
....++++++++++++. ..++.+++++- .....+.... .......+++.++++++++-..+..+..++.....
T Consensus 58 ~p~gvav~~~g~i~v~d---~~~~~i~~~~~---~~~~~~~~~~-~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~ 130 (260)
T d1rwia_ 58 QPQGLAVDGAGTVYVTD---FNNRVVTLAAG---SNNQTVLPFD-GLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKT 130 (260)
T ss_dssp SCCCEEECTTCCEEEEE---TTTEEEEECTT---CSCCEECCCC-SCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSS
T ss_pred CceEEEEcCCCCEEEee---eeeceeeeeee---ccceeeeeee-eeeecccccccccceeEeeccccccccccccccce
Confidence 35678999999988877 56777777664 2222222222 22456889999999888776666777777765543
Q ss_pred EEEecccCCCCeeEEEecCCCCEEEEecCCCcee-----------------eceEEEEEccCCceEEEecCCCcEEEEEc
Q psy7433 89 IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-----------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSL 151 (213)
Q Consensus 89 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-----------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~ 151 (213)
..............++++|+++.+++...++.+. ..+..++++++|+++++....+.|..++.
T Consensus 131 ~~~~~~~~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~ 210 (260)
T d1rwia_ 131 QTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLA 210 (260)
T ss_dssp CEECCCCSCCSCCEEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTTEEEEECT
T ss_pred eeeeeecccCCcceeeecCCCCEeeeccccccccccccccceeeeeeccccCCCccceeeeeeeeeeeecCCCEEEEEeC
Confidence 3222222234557899999988877766665554 55688999999998888888888888876
Q ss_pred cCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeE-EEEecCCcEEEEeCCC
Q psy7433 152 SGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRL-FSCGADGSMKVRQLPD 204 (213)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l-~s~~~d~~i~iw~~~~ 204 (213)
..... ..+.... ......+++++++.| ++-..++.|+.++...
T Consensus 211 ~~~~~-~~~~~~~---------~~~P~~i~~d~~g~l~vad~~~~rI~~i~~~~ 254 (260)
T d1rwia_ 211 GSTTS-TVLPFTG---------LNTPLAVAVDSDRTVYVADRGNDRVVKLTSLE 254 (260)
T ss_dssp TCSCC-EECCCCS---------CCCEEEEEECTTCCEEEEEGGGTEEEEECCCG
T ss_pred CCCeE-EEEccCC---------CCCeEEEEEeCCCCEEEEECCCCEEEEEeCCC
Confidence 43322 1221111 135788999986654 4445566666655443
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=99.08 E-value=2.1e-07 Score=66.51 Aligned_cols=102 Identities=11% Similarity=-0.015 Sum_probs=58.2
Q ss_pred eEEEEEeCCCCeEEEeecc----CCCccEEEEeCCCcccccceeeeee----ecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 10 TSDFVFLGSCSLVATAGHS----SESKNVCLWDSLLPQKKALVQAFVC----HDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~----s~~~~i~iwd~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
.-.++|.|+|+++++.... ..+++|..||.. .......... .......++|.++++.|+++.....+..
T Consensus 20 ~EGpa~d~dG~ly~~~~~~~~~~~~~g~I~r~d~~---~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~~l~vad~~~~i~~ 96 (314)
T d1pjxa_ 20 AEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLK---TGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLV 96 (314)
T ss_dssp CEEEEECTTSCEEEEETTCEETTEECCEEEEECTT---TCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEE
T ss_pred CeEeEEeCCCCEEEEECccccccccCCEEEEEECC---CCcEEEEECCccccCCCcceeEEEeCCCCEEEEEECCCeEEE
Confidence 5567899999988775210 014578888873 2222111111 1223567999999988887776677888
Q ss_pred EeccCceEEEecccCCC----CeeEEEecCCCCEEEE
Q psy7433 82 IDLRQRVIRSRFNAHES----PVKCLAIDPHEEFFVT 114 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~----~i~~~~~~~~~~~l~~ 114 (213)
+|..............+ ....+++.++|+..++
T Consensus 97 ~~~~g~~~~~~~~~~~g~~~~~pndl~~d~~G~lyvt 133 (314)
T d1pjxa_ 97 VQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWIT 133 (314)
T ss_dssp EETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEE
T ss_pred EeCCCcEEEEEeccccccccCCCcEEEECCCCCEEEe
Confidence 88765432221111111 2345666666655544
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=99.07 E-value=1.4e-08 Score=74.22 Aligned_cols=144 Identities=11% Similarity=0.123 Sum_probs=93.5
Q ss_pred ceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeee--eecCCceEEEEecCCCEEEEE-cCCCcEEEEecc
Q psy7433 9 ITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV--CHDQGASSLVFAPQHQLLISA-GKKGDICVIDLR 85 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~-~~d~~v~iwd~~ 85 (213)
.+.++.|+|+|++++++. .....|.+|+.............. ......+.++|+|++++++.. ..++.|.+|++.
T Consensus 146 h~h~v~~sPdG~~l~v~d--~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~ 223 (365)
T d1jofa_ 146 GIHGMVFDPTETYLYSAD--LTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVID 223 (365)
T ss_dssp CEEEEEECTTSSEEEEEE--TTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred cceEEEECCCCCEEEEee--CCCCEEEEEEccCCCceeeccceeecCCCCceEEEEECCCCceEEEeccCCCEEEEEEec
Confidence 367899999999888874 345678888764222222222222 124567899999999988654 467899999987
Q ss_pred CceE--E---Eeccc--------------CCCCeeEEEecCCCCEEEEecCC-Cc-----ee------------------
Q psy7433 86 QRVI--R---SRFNA--------------HESPVKCLAIDPHEEFFVTGAGD-GD-----IK------------------ 122 (213)
Q Consensus 86 ~~~~--~---~~~~~--------------~~~~i~~~~~~~~~~~l~~~~~~-~~-----i~------------------ 122 (213)
.++. . ..... .......+.++|++++++++... .. +.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~ 303 (365)
T d1jofa_ 224 PATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSP 303 (365)
T ss_dssp TTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEE
T ss_pred CCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecCCCceeeEeEeeE
Confidence 6421 1 11110 11124578999999998776431 11 11
Q ss_pred -----eceEEEEEcc-CCceEEEe-cCCCcEEEEEccCC
Q psy7433 123 -----SPVKCLAIDP-HEEFFVTG-AGDGDIKVWSLSGN 154 (213)
Q Consensus 123 -----~~v~~~~~~~-~~~~l~~~-~~dg~i~v~d~~~~ 154 (213)
.....++++| +|++|+++ ..++.|.+|++...
T Consensus 304 ~~~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~~~ 342 (365)
T d1jofa_ 304 TPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp CSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred EEcCCCCccEEEecCCCCCEEEEEeCCCCeEEEEEEeCC
Confidence 2456689998 78977666 46689999987644
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=99.04 E-value=5e-07 Score=62.56 Aligned_cols=185 Identities=12% Similarity=0.082 Sum_probs=105.0
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcC-CCcEEE--
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGK-KGDICV-- 81 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~v~i-- 81 (213)
.+.+.+.+-+|||||+.||..........+.+.+. .......+..+........|+|+|+.++.... ++...+
T Consensus 36 ~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~ 111 (269)
T d2hqsa1 36 RSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTL----ANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYV 111 (269)
T ss_dssp EESSCEEEEEECTTSSEEEEEECTTSSCEEEEEET----TTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEE
T ss_pred cCCCceeeeEECCCCCEEEEEEeeccCcceeeeec----ccCceeEEeeeecccccceecCCCCeeeEeeecCCccceee
Confidence 35667788999999999997632122234555554 23333445556777889999999998876543 333222
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEec-CCCcee------------------eceEEEEEccCCceEEEecC
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGA-GDGDIK------------------SPVKCLAIDPHEEFFVTGAG 142 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~~~~i~------------------~~v~~~~~~~~~~~l~~~~~ 142 (213)
+......... ............+++++..++..+ .++... .......|+|+++.++..+.
T Consensus 112 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~ 190 (269)
T d2hqsa1 112 MDLASGQIRQ-VTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSS 190 (269)
T ss_dssp EETTTCCEEE-CCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEE
T ss_pred ccccccccee-eeeccccccccccccccccceecccccCCceEeeeecccccceeeecccccccccccccccceeEEEee
Confidence 3322222222 222333344455666555443333 333211 45567789999997776655
Q ss_pred C-CcEEEE--EccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEe-c--CCcEEEEeCCCCc
Q psy7433 143 D-GDIKVW--SLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCG-A--DGSMKVRQLPDRD 206 (213)
Q Consensus 143 d-g~i~v~--d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~-~--d~~i~iw~~~~~~ 206 (213)
+ +...+| |...+.. ...... .......|+|++. |+-.+ . ...+.++++..+.
T Consensus 191 ~~~~~~i~~~~~~~~~~--~~~~~~----------~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~dg~~ 249 (269)
T d2hqsa1 191 NGGQQHIAKQDLATGGV--QVLSST----------FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRF 249 (269)
T ss_dssp CSSCEEEEEEETTTCCE--EECCCS----------SSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCC
T ss_pred cCCceeeeEeecccccc--eEeecC----------ccccceEECCCCCEEEEEEcCCCCcEEEEEECCCCC
Confidence 4 444444 4443332 222222 4567788999764 44333 2 3468888988654
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=99.00 E-value=8.9e-07 Score=63.29 Aligned_cols=187 Identities=13% Similarity=0.165 Sum_probs=113.3
Q ss_pred eEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcC----CCcEEEEecc
Q psy7433 10 TSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGK----KGDICVIDLR 85 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~v~iwd~~ 85 (213)
+..++|.++|+++++- ..++.|..|+. ........+.........++++++|+++++... .+.+...+..
T Consensus 42 lEG~~~D~~G~Ly~~D---~~~g~I~ri~p---~g~~~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~ 115 (319)
T d2dg1a1 42 LEGLNFDRQGQLFLLD---VFEGNIFKINP---ETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATEN 115 (319)
T ss_dssp EEEEEECTTSCEEEEE---TTTCEEEEECT---TTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTT
T ss_pred cEeCEECCCCCEEEEE---CCCCEEEEEEC---CCCeEEEEEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCC
Confidence 4678999999977766 57888998886 333333333344556789999999987776532 2345555555
Q ss_pred CceEEEeccc--CCCCeeEEEecCCCCEEEEecCCCc----------------ee------eceEEEEEccCCceE-EEe
Q psy7433 86 QRVIRSRFNA--HESPVKCLAIDPHEEFFVTGAGDGD----------------IK------SPVKCLAIDPHEEFF-VTG 140 (213)
Q Consensus 86 ~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~~~~----------------i~------~~v~~~~~~~~~~~l-~~~ 140 (213)
.......... .......+++.++|++.++...... +. ...+.++|+|+++.| ++-
T Consensus 116 ~~~~~~~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~~~~~~~~~~~~pnGia~s~dg~~lyvad 195 (319)
T d2dg1a1 116 GDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTE 195 (319)
T ss_dssp SCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEE
T ss_pred CceeeeeccCCCcccCCcceeEEeccceeecccccccccCcceeEEEecccceeEEEeeccceeeeeeeccccceEEEec
Confidence 5443333321 2335678999999987665432211 11 345679999999855 555
Q ss_pred cCCCcEEEEEccCC-eeeeeecCCCCceeEEEecCCCeEEEEeCCCCe-EEEEecCCcEEEEeCCCCc
Q psy7433 141 AGDGDIKVWSLSGN-HLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSR-LFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 141 ~~dg~i~v~d~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~d~~i~iw~~~~~~ 206 (213)
+..+.|..||+... .......... ............++++.++. +++....+.|.+++- +++
T Consensus 196 ~~~~~I~~~d~~~~g~~~~~~~~~~---~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p-~G~ 259 (319)
T d2dg1a1 196 TTANRLHRIALEDDGVTIQPFGATI---PYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGY 259 (319)
T ss_dssp GGGTEEEEEEECTTSSSEEEEEEEE---EEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSC
T ss_pred ccCCceEEEEEcCCCceecccccee---eeccCCccceeeeeEcCCCCEEEEEcCCCEEEEECC-CCc
Confidence 67789999998532 1111110000 00000012366789988665 455567789999995 443
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.92 E-value=1e-07 Score=66.48 Aligned_cols=96 Identities=8% Similarity=0.034 Sum_probs=64.9
Q ss_pred EEeCC--CCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcC-C-----CcEEEEecc
Q psy7433 14 VFLGS--CSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGK-K-----GDICVIDLR 85 (213)
Q Consensus 14 ~~~~~--~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-----~~v~iwd~~ 85 (213)
..+|+ |+.+|.. .++.|.+.|+. .+ ..+.+..+.......+|||||+.|+.... + ..|.+++..
T Consensus 5 ~~sPdi~G~~v~f~----~~~dl~~~d~~---~g-~~~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~ 76 (281)
T d1k32a2 5 LLNPDIHGDRIIFV----CCDDLWEHDLK---SG-STRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGE 76 (281)
T ss_dssp CEEEEEETTEEEEE----ETTEEEEEETT---TC-CEEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETT
T ss_pred ccCCCCCCCEEEEE----eCCcEEEEECC---CC-CEEEEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEec
Confidence 46788 9999887 46678888883 22 33455556677889999999999886532 1 247777877
Q ss_pred CceEEEeccc------CCCCeeEEEecCCCCEEEEecC
Q psy7433 86 QRVIRSRFNA------HESPVKCLAIDPHEEFFVTGAG 117 (213)
Q Consensus 86 ~~~~~~~~~~------~~~~i~~~~~~~~~~~l~~~~~ 117 (213)
+++..+.... .........|+|+++.++....
T Consensus 77 ~g~~~~lt~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 114 (281)
T d1k32a2 77 NGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDA 114 (281)
T ss_dssp TTEEEECCCCCEEEETTEECSEEEEECTTCCEEEEECT
T ss_pred CCceEEeeecCCCccCccccccccccCCCCCEEEEEEc
Confidence 7765543221 1123567889999998876543
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=98.88 E-value=1.9e-07 Score=66.23 Aligned_cols=147 Identities=13% Similarity=0.066 Sum_probs=101.3
Q ss_pred CceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee--------------
Q psy7433 57 GASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK-------------- 122 (213)
Q Consensus 57 ~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~-------------- 122 (213)
.+..++++|+|+++++...+++|..||.... ...+......+.+++++|+++.+++...++.+.
T Consensus 29 ~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g~--~~~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~~ 106 (302)
T d2p4oa1 29 FLENLASAPDGTIFVTNHEVGEIVSITPDGN--QQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETL 106 (302)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTCC--EEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred CcCCEEECCCCCEEEEeCCCCEEEEEeCCCC--EEEEEcCCCCcceEEEcCCCCeEEEecCCceEEEEEecccccceeec
Confidence 5778999999999999998999988886543 223344567789999999999888876666543
Q ss_pred ------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCc
Q psy7433 123 ------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGS 196 (213)
Q Consensus 123 ------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~ 196 (213)
.....+.+.++++++++.+.++.+..+|...+.........................+.++.+..+++.+..+.
T Consensus 107 ~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~~~~l~~~~~~~~~ 186 (302)
T d2p4oa1 107 LTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTEKML 186 (302)
T ss_dssp EECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEETTTTE
T ss_pred cccCCccccceeEEccCCCEEeeccccccceeeeccCCcceeEecCCccceeeccCcccccccccccCCceeeecCCCCe
Confidence 45678899999999998888898988888766433222211100000000113456677765555667777788
Q ss_pred EEEEeCCCC
Q psy7433 197 MKVRQLPDR 205 (213)
Q Consensus 197 i~iw~~~~~ 205 (213)
|..++....
T Consensus 187 i~~~~~~~~ 195 (302)
T d2p4oa1 187 LLRIPVDST 195 (302)
T ss_dssp EEEEEBCTT
T ss_pred EEecccccc
Confidence 888877654
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.87 E-value=3.5e-08 Score=74.45 Aligned_cols=134 Identities=8% Similarity=0.070 Sum_probs=84.2
Q ss_pred EEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEc---------CCCcEEEEe
Q psy7433 13 FVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG---------KKGDICVID 83 (213)
Q Consensus 13 ~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---------~d~~v~iwd 83 (213)
..|.+++.++... .+|.|.+||+.+......+.........+....||||+++++... ..+.+.++|
T Consensus 22 ~~W~~~~~~~~~~----~~g~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d 97 (465)
T d1xfda1 22 AKWISDTEFIYRE----QKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSK 97 (465)
T ss_dssp CCBSSSSCBCCCC----SSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEE
T ss_pred CEEeCCCcEEEEe----CCCcEEEEECCCCCEEEEEcCccccccccceeEECCCCCeEEEEEcccceeEeeccccEEEEE
Confidence 4688888877654 688999999843222111111111223567788999999887653 357889999
Q ss_pred ccCceEEEe--cccCCCCeeEEEecCCCCEEEEecCCCcee----------------------------------eceEE
Q psy7433 84 LRQRVIRSR--FNAHESPVKCLAIDPHEEFFVTGAGDGDIK----------------------------------SPVKC 127 (213)
Q Consensus 84 ~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~----------------------------------~~v~~ 127 (213)
+.++..... .......+....|+|+|+.++-...+.... ..-..
T Consensus 98 ~~~~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~~~nl~~~~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a 177 (465)
T d1xfda1 98 IPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIA 177 (465)
T ss_dssp SSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEE
T ss_pred ccCCceeeccCccCCccccceeeeccCCceEEEEecceEEEEecCCCceEEEecccCcceeeccccchhhhhhhccccce
Confidence 988765432 222344566789999999887655332111 11246
Q ss_pred EEEccCCceEEEecCC-CcEEEEE
Q psy7433 128 LAIDPHEEFFVTGAGD-GDIKVWS 150 (213)
Q Consensus 128 ~~~~~~~~~l~~~~~d-g~i~v~d 150 (213)
+-|||||++|+....| ..+..+.
T Consensus 178 ~~WSPDgk~iaf~~~D~s~V~~~~ 201 (465)
T d1xfda1 178 HWWSPDGTRLAYAAINDSRVPIME 201 (465)
T ss_dssp EEECTTSSEEEEEEEECTTSCEEE
T ss_pred EEECCCCCeEEEEEecccccceee
Confidence 7799999998877532 3344443
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=98.79 E-value=2.4e-06 Score=62.20 Aligned_cols=144 Identities=12% Similarity=0.121 Sum_probs=88.7
Q ss_pred CceEEEEecCCCEEEEEcC-CCcEEEEeccCc-eE--EEec--ccCCCCeeEEEecCCCCEEEEecC-CCcee-------
Q psy7433 57 GASSLVFAPQHQLLISAGK-KGDICVIDLRQR-VI--RSRF--NAHESPVKCLAIDPHEEFFVTGAG-DGDIK------- 122 (213)
Q Consensus 57 ~v~~~~~~~~~~~l~~~~~-d~~v~iwd~~~~-~~--~~~~--~~~~~~i~~~~~~~~~~~l~~~~~-~~~i~------- 122 (213)
.+.++.|+|+|+++++++. ...|.+|+.... .. .... .........++|+|+++++.+..+ ++.+.
T Consensus 146 h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~ 225 (365)
T d1jofa_ 146 GIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPA 225 (365)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred cceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeeccceeecCCCCceEEEEECCCCceEEEeccCCCEEEEEEecCC
Confidence 4689999999998888753 357888876532 21 1111 223457889999999998766654 34332
Q ss_pred -----------------------------eceEEEEEccCCceEEEecC------CCcEEEEEccCCeeeeeecC-CCCc
Q psy7433 123 -----------------------------SPVKCLAIDPHEEFFVTGAG------DGDIKVWSLSGNHLLYNFPG-EHAR 166 (213)
Q Consensus 123 -----------------------------~~v~~~~~~~~~~~l~~~~~------dg~i~v~d~~~~~~~~~~~~-~~~~ 166 (213)
.....+.++|+|++|+++.. .+.|..|++.....+..... ..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~-- 303 (365)
T d1jofa_ 226 THMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSP-- 303 (365)
T ss_dssp TCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEE--
T ss_pred CceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecCCCceeeEeEeeE--
Confidence 23457899999998887743 22377777643221111100 00
Q ss_pred eeEEEecCCCeEEEEeCC-CC-eEE-EEecCCcEEEEeCCCC
Q psy7433 167 SSFFKHIGQGVTQLHVDG-GS-RLF-SCGADGSMKVRQLPDR 205 (213)
Q Consensus 167 ~~~~~~~~~~v~~~~~~~-~~-~l~-s~~~d~~i~iw~~~~~ 205 (213)
....+.....++++| ++ +|+ +...++.|.+|+++..
T Consensus 304 ---~~~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~~~ 342 (365)
T d1jofa_ 304 ---TPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp ---CSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred ---EEcCCCCccEEEecCCCCCEEEEEeCCCCeEEEEEEeCC
Confidence 000124567788987 44 454 4457789999988654
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.74 E-value=1.6e-06 Score=60.65 Aligned_cols=138 Identities=9% Similarity=0.130 Sum_probs=98.4
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeee--eecCCceEEEEecCCCEEEEEcCCCcEEEEecc
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV--CHDQGASSLVFAPQHQLLISAGKKGDICVIDLR 85 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~ 85 (213)
.....+++.++++++++. ...+.+.+++. ..+.+..+. .+......+++.++++.+++....+.|.+||..
T Consensus 114 ~~p~~~avd~~G~i~v~~---~~~~~~~~~~~----~g~~~~~~g~~~~~~~~~~i~~d~~g~i~v~d~~~~~V~~~d~~ 186 (279)
T d1q7fa_ 114 QHPRGVTVDNKGRIIVVE---CKVMRVIIFDQ----NGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE 186 (279)
T ss_dssp SCEEEEEECTTSCEEEEE---TTTTEEEEECT----TSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT
T ss_pred cccceeccccCCcEEEEe---eccceeeEecc----CCceeecccccccccccceeeeccceeEEeeeccccceeeeecC
Confidence 446778888888888776 56677888874 344444442 234567788999999988888888999999964
Q ss_pred CceEEEecc--cCCCCeeEEEecCCCCEEEEecCC-Ccee------------------eceEEEEEccCCceEEEecCCC
Q psy7433 86 QRVIRSRFN--AHESPVKCLAIDPHEEFFVTGAGD-GDIK------------------SPVKCLAIDPHEEFFVTGAGDG 144 (213)
Q Consensus 86 ~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~~-~~i~------------------~~v~~~~~~~~~~~l~~~~~dg 144 (213)
++.+..+. +.......+++.++++.+++-..+ +.+. .....+++.|+|.+++ ++.++
T Consensus 187 -G~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~~G~~~~~~~~~~~~~~p~~vav~~dG~l~V-~~~n~ 264 (279)
T d1q7fa_ 187 -GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKVKHAQCFDVALMDDGSVVL-ASKDY 264 (279)
T ss_dssp -CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEESSCCSCEEEEEEETTTEEEE-EETTT
T ss_pred -CceeeeecccccccCCcccccccCCeEEEEECCCCcEEEEECCCCCEEEEEeCCCCCCCEeEEEEeCCCcEEE-EeCCC
Confidence 55555553 234457899999999877664433 2232 3578889999987555 45788
Q ss_pred cEEEEEccCC
Q psy7433 145 DIKVWSLSGN 154 (213)
Q Consensus 145 ~i~v~d~~~~ 154 (213)
.|++|.....
T Consensus 265 ~v~~fr~~~~ 274 (279)
T d1q7fa_ 265 RLYIYRYVQL 274 (279)
T ss_dssp EEEEEECSCC
T ss_pred eEEEEEeeee
Confidence 9999987654
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.71 E-value=3.2e-06 Score=58.35 Aligned_cols=164 Identities=12% Similarity=0.133 Sum_probs=98.5
Q ss_pred cccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEE-EEcCCCc--EEE
Q psy7433 5 CHNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLI-SAGKKGD--ICV 81 (213)
Q Consensus 5 ~h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~--v~i 81 (213)
.+.+......|+|+|+.++... ..++...++... ....................+++++..++ +...++. |.+
T Consensus 80 ~~~~~~~~~~~spdg~~i~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~ 155 (269)
T d2hqsa1 80 SFPRHNGAPAFSPDGSKLAFAL--SKTGSLNLYVMD--LASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYK 155 (269)
T ss_dssp CCSSCEEEEEECTTSSEEEEEE--CTTSSCEEEEEE--TTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEE
T ss_pred eeecccccceecCCCCeeeEee--ecCCccceeecc--cccccceeeeeccccccccccccccccceecccccCCceEee
Confidence 4566778899999999988764 233333333321 11112222222334445566777666544 4444554 555
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCcee------------------eceEEEEEccCCceEEEecC-
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIK------------------SPVKCLAIDPHEEFFVTGAG- 142 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~------------------~~v~~~~~~~~~~~l~~~~~- 142 (213)
.++..+... .............|+|+++.++..+.++... .......|+|||+.|+-.+.
T Consensus 156 ~~~~~~~~~-~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~p~~SPDG~~i~f~s~~ 234 (269)
T d2hqsa1 156 VNINGGAPQ-RITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQ 234 (269)
T ss_dssp EETTSSCCE-ECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCSSSCEEEEECTTSSEEEEEEEE
T ss_pred eecccccce-eeecccccccccccccccceeEEEeecCCceeeeEeecccccceEeecCccccceEECCCCCEEEEEEcC
Confidence 565555433 3334556677889999999888776655322 45567889999998775543
Q ss_pred --CCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCC
Q psy7433 143 --DGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDG 184 (213)
Q Consensus 143 --dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 184 (213)
...|.++++..+... .+.... +.+...+|+|
T Consensus 235 ~~~~~l~~~~~dg~~~~-~lt~~~----------g~~~~p~WSP 267 (269)
T d2hqsa1 235 GMGSVLNLVSTDGRFKA-RLPATD----------GQVKFPAWSP 267 (269)
T ss_dssp TTEEEEEEEETTSCCEE-ECCCSS----------SEEEEEEECC
T ss_pred CCCcEEEEEECCCCCEE-EEeCCC----------CcEEeEEeCC
Confidence 346888888765543 343333 5677888987
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.48 E-value=1.5e-06 Score=65.42 Aligned_cols=107 Identities=9% Similarity=-0.079 Sum_probs=69.4
Q ss_pred ceEEEEEeCCCCeEEEeec------cCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEE
Q psy7433 9 ITSDFVFLGSCSLVATAGH------SSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVI 82 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~------~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iw 82 (213)
.+....|+||+++++.... -+..+.+.++|+.+.. ...+.........+....|||+|+.||-.. ++.|.+.
T Consensus 62 ~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~-~~~l~~~~~~~~~l~~~~wSPDG~~iafv~-~~nl~~~ 139 (465)
T d1xfda1 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGD-PQSLDPPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYC 139 (465)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCC-CEECCCTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEE
T ss_pred ccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCCc-eeeccCccCCccccceeeeccCCceEEEEe-cceEEEE
Confidence 5667889999998876521 0234678899984321 122222222334566789999999998875 5688888
Q ss_pred eccCceEEEecccC-CC-----------------CeeEEEecCCCCEEEEecC
Q psy7433 83 DLRQRVIRSRFNAH-ES-----------------PVKCLAIDPHEEFFVTGAG 117 (213)
Q Consensus 83 d~~~~~~~~~~~~~-~~-----------------~i~~~~~~~~~~~l~~~~~ 117 (213)
+..++...+..... .. .-..+.|+|||+.|+....
T Consensus 140 ~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~~~ 192 (465)
T d1xfda1 140 AHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAI 192 (465)
T ss_dssp SSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEE
T ss_pred ecCCCceEEEecccCcceeeccccchhhhhhhccccceEEECCCCCeEEEEEe
Confidence 88776555443321 11 1246789999999998754
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=98.48 E-value=3e-05 Score=55.13 Aligned_cols=138 Identities=18% Similarity=0.177 Sum_probs=89.6
Q ss_pred CceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCC----cee----------
Q psy7433 57 GASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDG----DIK---------- 122 (213)
Q Consensus 57 ~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~----~i~---------- 122 (213)
.+..++|.++|++.++-...+.|..|+..+++....+.........++++++++.+++...+. .+.
T Consensus 41 ~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~~~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~~~~~ 120 (319)
T d2dg1a1 41 QLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQ 120 (319)
T ss_dssp CEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCE
T ss_pred CcEeCEECCCCCEEEEECCCCEEEEEECCCCeEEEEEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCCCceee
Confidence 456899999999777777888999999887765555555566788999999998877654322 111
Q ss_pred ---------eceEEEEEccCCceEEEecCC------CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCC-
Q psy7433 123 ---------SPVKCLAIDPHEEFFVTGAGD------GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGS- 186 (213)
Q Consensus 123 ---------~~v~~~~~~~~~~~l~~~~~d------g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~- 186 (213)
..+..+++.++|++.++.... +.+..++.... .+..+.. .....+.++|+|++
T Consensus 121 ~~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~-~~~~~~~----------~~~~pnGia~s~dg~ 189 (319)
T d2dg1a1 121 DIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFR-TVTPIIQ----------NISVANGIALSTDEK 189 (319)
T ss_dssp EEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSC-CEEEEEE----------EESSEEEEEECTTSS
T ss_pred eeccCCCcccCCcceeEEeccceeecccccccccCcceeEEEecccc-eeEEEee----------ccceeeeeeeccccc
Confidence 346678888888866553221 22333332221 1111111 11456889999865
Q ss_pred eE-EEEecCCcEEEEeCCCC
Q psy7433 187 RL-FSCGADGSMKVRQLPDR 205 (213)
Q Consensus 187 ~l-~s~~~d~~i~iw~~~~~ 205 (213)
.| ++-+..+.|..|++...
T Consensus 190 ~lyvad~~~~~I~~~d~~~~ 209 (319)
T d2dg1a1 190 VLWVTETTANRLHRIALEDD 209 (319)
T ss_dssp EEEEEEGGGTEEEEEEECTT
T ss_pred eEEEecccCCceEEEEEcCC
Confidence 34 55567889999988654
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.45 E-value=7.4e-05 Score=52.43 Aligned_cols=166 Identities=11% Similarity=0.098 Sum_probs=109.3
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeee-----ecCCceEEEEecCCCEEEEEcC----CC
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVC-----HDQGASSLVFAPQHQLLISAGK----KG 77 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~----d~ 77 (213)
...+.++++.++|++++++ . ..+.++|.. +++. ..+.. ....++.+.+.|+|++.++... .+
T Consensus 58 ~~~~~~i~~~~dg~l~va~----~-~gl~~~d~~---tg~~-~~l~~~~~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~ 128 (295)
T d2ghsa1 58 PFMGSALAKISDSKQLIAS----D-DGLFLRDTA---TGVL-TLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETG 128 (295)
T ss_dssp SSCEEEEEEEETTEEEEEE----T-TEEEEEETT---TCCE-EEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTT
T ss_pred CCCcEEEEEecCCCEEEEE----e-CccEEeecc---ccee-eEEeeeecCCCcccceeeEECCCCCEEEEecccccccc
Confidence 3567888888899888876 3 358889974 2322 12211 1124678899999987666432 23
Q ss_pred cEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEec-CCCcee-------------------------eceEEEEEc
Q psy7433 78 DICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGA-GDGDIK-------------------------SPVKCLAID 131 (213)
Q Consensus 78 ~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~~~~i~-------------------------~~v~~~~~~ 131 (213)
.-.+|.+..++...... .-.....++|+++++.+..+. ..+.+. ..+..++++
T Consensus 129 ~g~l~~~~~g~~~~~~~-~~~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD 207 (295)
T d2ghsa1 129 AGSIYHVAKGKVTKLFA-DISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCD 207 (295)
T ss_dssp CEEEEEEETTEEEEEEE-EESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEEC
T ss_pred ceeEeeecCCcEEEEee-ccCCcceeeecCCCceEEEeecccceeeEeeecccccccccceEEEeccCcccccccceEEc
Confidence 45677777776544443 233457899999888655443 344332 346778899
Q ss_pred cCCceEEEecCCCcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeC-CC-Ce-EEEEec
Q psy7433 132 PHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVD-GG-SR-LFSCGA 193 (213)
Q Consensus 132 ~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~-~~-l~s~~~ 193 (213)
++|++.++.-..+.|..||. .++.+..+..+. ..+++++|- ++ +. ++|.+.
T Consensus 208 ~~GnlWva~~~~g~V~~~dp-~G~~~~~i~lP~----------~~~T~~~FGG~d~~~LyvTta~ 261 (295)
T d2ghsa1 208 AEGHIWNARWGEGAVDRYDT-DGNHIARYEVPG----------KQTTCPAFIGPDASRLLVTSAR 261 (295)
T ss_dssp TTSCEEEEEETTTEEEEECT-TCCEEEEEECSC----------SBEEEEEEESTTSCEEEEEEBC
T ss_pred CCCCEEeeeeCCCceEEecC-CCcEeeEecCCC----------CceEEEEEeCCCCCEEEEEECC
Confidence 99997777767788999994 678888887754 468999996 44 33 455443
|
| >d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Nidogen species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.07 E-value=0.00055 Score=47.01 Aligned_cols=186 Identities=10% Similarity=-0.012 Sum_probs=112.7
Q ss_pred ccCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEE-EEcCCCcEEEEec
Q psy7433 6 HNKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLI-SAGKKGDICVIDL 84 (213)
Q Consensus 6 h~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~v~iwd~ 84 (213)
+.+.+.+++|.+..+.+.-+. ..++.|+..+++. ......+......+..+++..-+..|+ +-...+.|.+.++
T Consensus 34 ~~~~~~~ld~D~~~~~iywsd--~~~~~I~~~~l~g---~~~~~v~~~~~~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~ 108 (263)
T d1npea_ 34 PAKVIIGLAFDCVDKVVYWTD--ISEPSIGRASLHG---GEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKM 108 (263)
T ss_dssp EEEEEEEEEEETTTTEEEEEE--TTTTEEEEEESSS---CCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CCCcEEEEEEEeCCCEEEEEE--CCCCeEEEEEccc---CCcEEEEEeccccccEEEEeccCCeEEEeccCCCEEEEEec
Confidence 445577889998776666552 4667888888742 222222222234678899987565565 4455678999998
Q ss_pred cCceEEEecccCCCCeeEEEecCCCCEEEEecCC---Ccee-----------------eceEEEEEccCCceEEEe-cCC
Q psy7433 85 RQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGD---GDIK-----------------SPVKCLAIDPHEEFFVTG-AGD 143 (213)
Q Consensus 85 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~---~~i~-----------------~~v~~~~~~~~~~~l~~~-~~d 143 (213)
........+......+..++++|...++...... ..+. ..+..+++++.++.|... ...
T Consensus 109 dg~~~~~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~~~i~~~~~~~P~glaiD~~~~~lYw~d~~~ 188 (263)
T d1npea_ 109 DGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGT 188 (263)
T ss_dssp TSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCceEEEEecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCceeeeeecccccceEEEeecCcEEEEEeCCC
Confidence 7654333333334567899998865544433211 1121 456789998877766554 556
Q ss_pred CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCcc
Q psy7433 144 GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDA 207 (213)
Q Consensus 144 g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~ 207 (213)
+.|...|+........+.+. ....++++..+..+.+-...+.|...|..+++.
T Consensus 189 ~~I~~~~~~g~~~~~v~~~~-----------~~P~~lav~~~~lYwtd~~~~~I~~~~~~~g~~ 241 (263)
T d1npea_ 189 HRAECLNPAQPGRRKVLEGL-----------QYPFAVTSYGKNLYYTDWKTNSVIAMDLAISKE 241 (263)
T ss_dssp TEEEEEETTEEEEEEEEECC-----------CSEEEEEEETTEEEEEETTTTEEEEEETTTTEE
T ss_pred CEEEEEECCCCCeEEEECCC-----------CCcEEEEEECCEEEEEECCCCEEEEEECCCCcc
Confidence 78888888654443333332 234567776433344545667888888876643
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=97.98 E-value=0.00096 Score=46.55 Aligned_cols=173 Identities=9% Similarity=0.078 Sum_probs=105.6
Q ss_pred EEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEE
Q psy7433 12 DFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRS 91 (213)
Q Consensus 12 ~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~ 91 (213)
...|.+....|.-.. -..+.|..||.. +++ ...+. ....+.++++.+++.++++. .+ .+.++|..+++...
T Consensus 22 gp~wd~~~~~l~wvD--i~~~~I~r~d~~---~g~-~~~~~-~~~~~~~i~~~~dg~l~va~-~~-gl~~~d~~tg~~~~ 92 (295)
T d2ghsa1 22 GPTFDPASGTAWWFN--ILERELHELHLA---SGR-KTVHA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTL 92 (295)
T ss_dssp EEEEETTTTEEEEEE--GGGTEEEEEETT---TTE-EEEEE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEE
T ss_pred CCeEECCCCEEEEEE--CCCCEEEEEECC---CCe-EEEEE-CCCCcEEEEEecCCCEEEEE-eC-ccEEeecccceeeE
Confidence 456777544444332 357889999973 222 22222 34568899999998777654 44 58899999886543
Q ss_pred eccc----CCCCeeEEEecCCCCEEEEecCCC--------------cee------eceEEEEEccCCce-EEEecCCCcE
Q psy7433 92 RFNA----HESPVKCLAIDPHEEFFVTGAGDG--------------DIK------SPVKCLAIDPHEEF-FVTGAGDGDI 146 (213)
Q Consensus 92 ~~~~----~~~~i~~~~~~~~~~~l~~~~~~~--------------~i~------~~v~~~~~~~~~~~-l~~~~~dg~i 146 (213)
.... ....+..+.+.|+|++.++..... .+. ...+.++|+++++. +++-+..+.|
T Consensus 93 l~~~~~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~~~~~~Ng~~~s~d~~~l~~~dt~~~~I 172 (295)
T d2ghsa1 93 HAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRL 172 (295)
T ss_dssp EECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEE
T ss_pred EeeeecCCCcccceeeEECCCCCEEEEeccccccccceeEeeecCCcEEEEeeccCCcceeeecCCCceEEEeeccccee
Confidence 3221 122477889999998766543221 111 45578999999985 4555667889
Q ss_pred EEEEccCC------eee--eeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEe-cCCcEEEEeCC
Q psy7433 147 KVWSLSGN------HLL--YNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCG-ADGSMKVRQLP 203 (213)
Q Consensus 147 ~v~d~~~~------~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~-~d~~i~iw~~~ 203 (213)
..|++... +.. ...... .+....++++.++.|..+. ..+.|..||-.
T Consensus 173 ~~~~~d~~~~~~~~~~~~~~~~~~~----------~g~pdG~~vD~~GnlWva~~~~g~V~~~dp~ 228 (295)
T d2ghsa1 173 MRVPLDARTGLPTGKAEVFIDSTGI----------KGGMDGSVCDAEGHIWNARWGEGAVDRYDTD 228 (295)
T ss_dssp EEEEBCTTTCCBSSCCEEEEECTTS----------SSEEEEEEECTTSCEEEEEETTTEEEEECTT
T ss_pred eEeeecccccccccceEEEeccCcc----------cccccceEEcCCCCEEeeeeCCCceEEecCC
Confidence 88887421 111 111111 1457788888766654444 56678888843
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=97.98 E-value=0.00011 Score=52.03 Aligned_cols=117 Identities=16% Similarity=0.174 Sum_probs=69.7
Q ss_pred eEEEEEeCCCC----eEEEeeccCCCccEEEEeCCCcccccc---eeeeee-ecCCceEEEEecCCCEEEEEcCCCcEEE
Q psy7433 10 TSDFVFLGSCS----LVATAGHSSESKNVCLWDSLLPQKKAL---VQAFVC-HDQGASSLVFAPQHQLLISAGKKGDICV 81 (213)
Q Consensus 10 v~~~~~~~~~~----~l~~~g~~s~~~~i~iwd~~~~~~~~~---~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~v~i 81 (213)
.+.++|+|+++ .|..+. +..+.|..|++........ ...+.. .......+++.++|++.++....+.|.+
T Consensus 174 pNGi~~~~d~d~~~~~lyv~d--~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~g~I~~ 251 (314)
T d1pjxa_ 174 PNGIAVRHMNDGRPYQLIVAE--TPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEV 251 (314)
T ss_dssp EEEEEEEECTTSCEEEEEEEE--TTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEE
T ss_pred eeeeEECCCCCcceeEEEEEe--ecccceEEeeccCccccceeeEEEEccccccccceeeEEecCCcEEEEEcCCCEEEE
Confidence 35678888764 344332 5778888888732111111 111111 1123457899999998887777889999
Q ss_pred EeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCceeeceEEEEEccCCceEEEecCCCcEEEEEcc
Q psy7433 82 IDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPHEEFFVTGAGDGDIKVWSLS 152 (213)
Q Consensus 82 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~ 152 (213)
||.+.++....+.......++++|.|+++ .++++.+.+|.|..+++.
T Consensus 252 ~dp~~g~~~~~i~~p~~~~t~~afg~d~~------------------------~lyVt~~~~g~i~~~~~~ 298 (314)
T d1pjxa_ 252 FGPDGGQPKMRIRCPFEKPSNLHFKPQTK------------------------TIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp ECTTCBSCSEEEECSSSCEEEEEECTTSS------------------------EEEEEETTTTEEEEEECS
T ss_pred EeCCCCEEEEEEECCCCCEEEEEEeCCCC------------------------EEEEEECCCCcEEEEECC
Confidence 99887765555543334455555555443 245555667777777764
|
| >d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=97.94 E-value=0.00029 Score=51.38 Aligned_cols=186 Identities=8% Similarity=0.074 Sum_probs=116.1
Q ss_pred EEEEeC---CCCeEEEeeccCCCccEEEEeCCCcccccceeeeee-ecCCceEEEEec--CCCEEEEEcCC---------
Q psy7433 12 DFVFLG---SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVC-HDQGASSLVFAP--QHQLLISAGKK--------- 76 (213)
Q Consensus 12 ~~~~~~---~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~--~~~~l~~~~~d--------- 76 (213)
.+.+.. ||+++.... ..+..|-+-|++ ..++.+.+.. ....+..+...+ +..+++..+.+
T Consensus 89 ~~S~TdGtyDGrylFVND--kan~RVAvIdl~---~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~ 163 (459)
T d1fwxa2 89 HMSFTEGKYDGRFLFMND--KANTRVARVRCD---VMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGT 163 (459)
T ss_dssp EEEEETTEEEEEEEEEEE--TTTTEEEEEETT---TTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSS
T ss_pred cccccCCccceeEEEEEc--CCCceEEEEECc---ceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCCCc
Confidence 455543 788888875 578899999994 4444333322 233456666654 45577766542
Q ss_pred ---------CcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCCc--ee-----------------------
Q psy7433 77 ---------GDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDGD--IK----------------------- 122 (213)
Q Consensus 77 ---------~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~--i~----------------------- 122 (213)
+.+..+|..+.+...++.. ......+.++|+|+++++.+.+.. +.
T Consensus 164 ~l~d~~~y~~~~t~ID~~tm~V~~QV~V-~g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~a 242 (459)
T d1fwxa2 164 NMEDVANYVNVFTAVDADKWEVAWQVLV-SGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKA 242 (459)
T ss_dssp STTCGG-EEEEEEEEETTTTEEEEEEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHH
T ss_pred cccchhhcceEEEEEecCCceEEEEeee-CCChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHh
Confidence 2367789988887766653 345678999999999888765431 10
Q ss_pred --------------------------------eceEEEEEccCCceEEEe-cCCCcEEEEEccCCeeeeeecCCCCcee-
Q psy7433 123 --------------------------------SPVKCLAIDPHEEFFVTG-AGDGDIKVWSLSGNHLLYNFPGEHARSS- 168 (213)
Q Consensus 123 --------------------------------~~v~~~~~~~~~~~l~~~-~~dg~i~v~d~~~~~~~~~~~~~~~~~~- 168 (213)
.....+..+|||++++++ ..+.++.|+|+++-.....-........
T Consensus 243 v~~Gk~~eingV~VVD~~~~~~~~v~~yIPVpKsPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~~~~~~~~~ 322 (459)
T d1fwxa2 243 IAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVV 322 (459)
T ss_dssp HHHTCSEEETTEEEEECSGG--CSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-GGGGEE
T ss_pred hhcCCcEEeCCceeecccccCCcceeEEEecCCCCCceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhcccCCccccEE
Confidence 456678999999976655 4678999999974322210000000000
Q ss_pred EEEecCCCeEEEEeCCCCe-EEEEecCCcEEEEeCC
Q psy7433 169 FFKHIGQGVTQLHVDGGSR-LFSCGADGSMKVRQLP 203 (213)
Q Consensus 169 ~~~~~~~~v~~~~~~~~~~-l~s~~~d~~i~iw~~~ 203 (213)
.....+-.....+|+..+. ..|---|..|.-|++.
T Consensus 323 ~e~elglgPLht~fd~~g~aytslfids~v~kw~~~ 358 (459)
T d1fwxa2 323 AEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIE 358 (459)
T ss_dssp ECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHH
T ss_pred eecccCcCccccccCCCceEEEEeeccceEEEEecc
Confidence 0111234566677877665 4445579999999984
|
| >d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Low density lipoprotein (LDL) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.74 E-value=0.0024 Score=43.75 Aligned_cols=190 Identities=11% Similarity=0.015 Sum_probs=108.3
Q ss_pred cCceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceee-eeeecCCceEEEEecCCCEEEEE-cCCCcEEEEec
Q psy7433 7 NKITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQA-FVCHDQGASSLVFAPQHQLLISA-GKKGDICVIDL 84 (213)
Q Consensus 7 ~~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~-~~d~~v~iwd~ 84 (213)
.+.+.+++|.+..+.+.-+. ...+.|.-.+++.......... +......+..+++.+.+..|+.. ...+.|.+.++
T Consensus 29 ~~~~~~id~d~~~~~lYw~D--~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~p~glAvD~~~~~lY~~d~~~~~I~v~~~ 106 (266)
T d1ijqa1 29 LRNVVALDTEVASNRIYWSD--LSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT 106 (266)
T ss_dssp CSSEEEEEEETTTTEEEEEE--TTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CCceEEEEEEeCCCEEEEEE--CCCCEEEEEEecCCCCCcceEEEEeCCCCCcceEEEeeccceEEEEecCCCEEEeEec
Confidence 34567888988777666552 3556676666532111111222 22223457789998755555544 55678999998
Q ss_pred cCceEEEecccCCCCeeEEEecCCCCEEEEec--CCCcee-----------------eceEEEEEccCCceEEEe-cCCC
Q psy7433 85 RQRVIRSRFNAHESPVKCLAIDPHEEFFVTGA--GDGDIK-----------------SPVKCLAIDPHEEFFVTG-AGDG 144 (213)
Q Consensus 85 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~~~~i~-----------------~~v~~~~~~~~~~~l~~~-~~dg 144 (213)
..................++++|...++.... ..+.|. ..+..+++++.++.|..+ ...+
T Consensus 107 ~g~~~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~~~~l~~~~~~~p~gl~iD~~~~~lYw~d~~~~ 186 (266)
T d1ijqa1 107 KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH 186 (266)
T ss_dssp TSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred CCceEEEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCceecccccccceeeEEEeeccccEEEEecCCcC
Confidence 87655444554556678899988544433322 222232 456889999877655554 5567
Q ss_pred cEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCc
Q psy7433 145 DIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 145 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~ 206 (213)
.|...|+............... ....++++..+..+.+-..++.|...+..++.
T Consensus 187 ~I~~~~~dG~~~~~~~~~~~~~--------~~p~~lav~~~~ly~td~~~~~I~~~~~~~g~ 240 (266)
T d1ijqa1 187 SISSIDVNGGNRKTILEDEKRL--------AHPFSLAVFEDKVFWTDIINEAIFSANRLTGS 240 (266)
T ss_dssp EEEEEETTSCSCEEEEECTTTT--------SSEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred EEEEEECCCCCEEEEEeCCCcc--------cccEEEEEECCEEEEEECCCCeEEEEECCCCc
Confidence 8888888543322222221111 34566777754444555566777777766553
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.50 E-value=0.0055 Score=41.55 Aligned_cols=77 Identities=13% Similarity=0.185 Sum_probs=55.1
Q ss_pred EEecC--CCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecC-CC-----cee-----------
Q psy7433 62 VFAPQ--HQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAG-DG-----DIK----------- 122 (213)
Q Consensus 62 ~~~~~--~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-~~-----~i~----------- 122 (213)
..+|+ |+.++..+ ++.|.+.|+.+++.. .+..+.......+|+|||+.|+.... ++ .+.
T Consensus 5 ~~sPdi~G~~v~f~~-~~dl~~~d~~~g~~~-~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~ 82 (281)
T d1k32a2 5 LLNPDIHGDRIIFVC-CDDLWEHDLKSGSTR-KIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKR 82 (281)
T ss_dssp CEEEEEETTEEEEEE-TTEEEEEETTTCCEE-EEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEE
T ss_pred ccCCCCCCCEEEEEe-CCcEEEEECCCCCEE-EEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceEE
Confidence 45788 88887664 467888899888764 45556677889999999998886532 21 121
Q ss_pred ------------eceEEEEEccCCceEEEe
Q psy7433 123 ------------SPVKCLAIDPHEEFFVTG 140 (213)
Q Consensus 123 ------------~~v~~~~~~~~~~~l~~~ 140 (213)
.......|+|+|+.++..
T Consensus 83 lt~~~~~~~~~~~~~~~~~~spdg~~l~~~ 112 (281)
T d1k32a2 83 ITYFSGKSTGRRMFTDVAGFDPDGNLIIST 112 (281)
T ss_dssp CCCCCEEEETTEECSEEEEECTTCCEEEEE
T ss_pred eeecCCCccCccccccccccCCCCCEEEEE
Confidence 234567899999987765
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=97.33 E-value=0.013 Score=41.87 Aligned_cols=107 Identities=10% Similarity=0.048 Sum_probs=64.6
Q ss_pred EEEEeCCCCeEEEeeccCC--Cc------cEEEEeCCCcccccceeee-eeecCCceEEEEecCCCEEEEEcCC-CcEEE
Q psy7433 12 DFVFLGSCSLVATAGHSSE--SK------NVCLWDSLLPQKKALVQAF-VCHDQGASSLVFAPQHQLLISAGKK-GDICV 81 (213)
Q Consensus 12 ~~~~~~~~~~l~~~g~~s~--~~------~i~iwd~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d-~~v~i 81 (213)
......+|+.++.+|.... .+ .+.+||..+.. ....... ..+.......++.+++++++.|+.+ ..+.+
T Consensus 24 ~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~-w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~~~~ 102 (387)
T d1k3ia3 24 AAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGI-VSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 102 (387)
T ss_dssp EEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCC-BCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred EEEEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCc-EeecCCCCCCcccceeEEEEecCCcEEEeecCCCcceeE
Confidence 3344458888988874110 01 37789985432 2222222 2233334567888999999988755 57999
Q ss_pred EeccCceEEEeccc-CCCCeeEEEecCCCCEEEEecCCC
Q psy7433 82 IDLRQRVIRSRFNA-HESPVKCLAIDPHEEFFVTGAGDG 119 (213)
Q Consensus 82 wd~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~~~ 119 (213)
||..+......-.. ....-...+..++++.++.++...
T Consensus 103 yd~~~~~w~~~~~~~~~r~~~~~~~~~dG~v~v~GG~~~ 141 (387)
T d1k3ia3 103 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWS 141 (387)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCC
T ss_pred ecCccCcccccccccccccccceeeecCCceeeeccccc
Confidence 99988755332111 112234667778899998887643
|
| >d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Clathrin heavy-chain terminal domain family: Clathrin heavy-chain terminal domain domain: Clathrin heavy-chain terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.90 E-value=0.031 Score=38.62 Aligned_cols=167 Identities=8% Similarity=0.115 Sum_probs=106.2
Q ss_pred EEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCc-eEE
Q psy7433 12 DFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQR-VIR 90 (213)
Q Consensus 12 ~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~-~~~ 90 (213)
+.-.+|..+.||.- ....+.++|+ +..+.++.+.- ..+|.-=.|-.+ +.|+... +..|+-|+++.. .+.
T Consensus 67 sAIMhP~~~IiALr----ag~~LQiFnl---etK~klks~~~-~e~VvfWkWis~-~~L~lVT-~taVYHW~~~g~s~P~ 136 (327)
T d1utca2 67 SAIMNPASKVIALK----AGKTLQIFNI---EMKSKMKAHTM-TDDVTFWKWISL-NTVALVT-DNAVYHWSMEGESQPV 136 (327)
T ss_dssp EEEECSSSSEEEEE----ETTEEEEEET---TTTEEEEEEEC-SSCCCEEEESSS-SEEEEEC-SSEEEEEESSSSCCCE
T ss_pred hhhcCCCCcEEEEe----cCCeEEEEeh---hHhhhhceEEc-CCCcEEEEecCC-CEEEEEc-CCceEEEcccCCCCch
Confidence 34467888888887 3678999999 56666666553 456766667544 4565554 358999999543 445
Q ss_pred EecccC----CCCeeEEEecCCCCEEEEec---CCCcee-----------------------------------------
Q psy7433 91 SRFNAH----ESPVKCLAIDPHEEFFVTGA---GDGDIK----------------------------------------- 122 (213)
Q Consensus 91 ~~~~~~----~~~i~~~~~~~~~~~l~~~~---~~~~i~----------------------------------------- 122 (213)
+.+..| ...|..-..+++.++++..+ .++.+.
T Consensus 137 k~fdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa 216 (327)
T d1utca2 137 KMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFA 216 (327)
T ss_dssp EEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEECCSEEEEEEECCTTCSSCEEEEEEE
T ss_pred hhhhhcccccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccCcCccccceeeeeEEEEcCCCCCCceEEEEE
Confidence 444433 34667777788887765443 233332
Q ss_pred ---------------------------------------eceEEEEEccCCceEEEecCCCcEEEEEccCCeeeeeecCC
Q psy7433 123 ---------------------------------------SPVKCLAIDPHEEFFVTGAGDGDIKVWSLSGNHLLYNFPGE 163 (213)
Q Consensus 123 ---------------------------------------~~v~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~ 163 (213)
.-..+|..++.-..+..-+.-|.+++||+.++.+++.-+-.
T Consensus 217 ~r~~~~~kLhIiEig~~~~g~~~f~kk~vdi~fppea~~DFPvamqvs~kygiiyviTK~G~i~lyDleTgt~i~~nRIs 296 (327)
T d1utca2 217 VRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRIS 296 (327)
T ss_dssp EEETTEEEEEEEECSCCCTTCCCCCCEEEECCCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred ECCCCCcEEEEEEcCCCccCCCCCcceeEEEECCccccCCcEEEEEeeccCCEEEEEecCcEEEEEEcccccEEEEeecC
Confidence 33455666666667777888899999999999998877664
Q ss_pred CCceeEEEecCCCeEEEEeCC-CCeEEEEecCCcEE
Q psy7433 164 HARSSFFKHIGQGVTQLHVDG-GSRLFSCGADGSMK 198 (213)
Q Consensus 164 ~~~~~~~~~~~~~v~~~~~~~-~~~l~s~~~d~~i~ 198 (213)
. ..|-..+-+. .+=++....+|.|.
T Consensus 297 ~----------~~iF~~a~~~~~~Gi~~VNr~GqVl 322 (327)
T d1utca2 297 G----------ETIFVTAPHEATAGIIGVNRKGQVL 322 (327)
T ss_dssp S----------SCEEEEEEETTTTEEEEEETTSEEE
T ss_pred C----------CceEEeccCCCCceEEEECCCCeEE
Confidence 4 3444333333 23355555666554
|
| >d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=96.74 E-value=0.071 Score=40.49 Aligned_cols=55 Identities=18% Similarity=0.270 Sum_probs=35.9
Q ss_pred CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCccc
Q psy7433 144 GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 144 g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
|.|.-+|+++++.+-+....... .++.+ ...++.+++++.||.++-+|.++++.+
T Consensus 444 G~l~AiD~~TG~~~W~~~~~~~~------~~g~l----~TagglVf~G~~dg~l~A~Da~tGe~l 498 (571)
T d2ad6a1 444 GQIRAFDLTTGKAKWTKWEKFAA------WGGTL----YTKGGLVWYATLDGYLKALDNKDGKEL 498 (571)
T ss_dssp EEEEEECTTTCCEEEEEEESSCC------CSBCE----EETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred ccEEEeccCCCceeeEcCCCCCC------Cccee----EecCCEEEEECCCCeEEEEECCCCcEE
Confidence 46777777777776554432110 01121 123678888999999999999998765
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=96.57 E-value=0.075 Score=40.23 Aligned_cols=55 Identities=20% Similarity=0.368 Sum_probs=37.8
Q ss_pred CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCccc
Q psy7433 144 GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 144 g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
|.+.-+|+.+++.+-..+...... +.+ ++ ..++.+++++.||.++-+|..+++.+
T Consensus 438 G~l~A~D~~tGk~~W~~~~~~~~~-------gg~--l~-TagglVF~G~~dg~l~A~Da~tGe~L 492 (560)
T d1kv9a2 438 GALLAWDPVKQKAAWKVPYPTHWN-------GGT--LS-TAGNLVFQGTAAGQMHAYSADKGEAL 492 (560)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCC-------CCE--EE-ETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred cceEEEeCCCCeEeeeccCCCCCC-------Cce--eE-ECCCEEEEECCCCcEEEEECCCCcEe
Confidence 567788888888876655432110 111 11 23678888999999999999999765
|
| >d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Nidogen species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.31 E-value=0.079 Score=35.86 Aligned_cols=149 Identities=9% Similarity=-0.049 Sum_probs=85.7
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCC-Cc--EEEEec
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKK-GD--ICVIDL 84 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~~--v~iwd~ 84 (213)
..+.++++..-+..|..+. ...+.|.+.+++. ......+.........++++|...+|+..... +. |.--++
T Consensus 79 ~~p~~iAvD~~~~~lY~~d--~~~~~I~~~~~dg---~~~~~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~ 153 (263)
T d1npea_ 79 GSPEGIALDHLGRTIFWTD--SQLDRIEVAKMDG---TQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHM 153 (263)
T ss_dssp CCEEEEEEETTTTEEEEEE--TTTTEEEEEETTS---CSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEET
T ss_pred ccccEEEEeccCCeEEEec--cCCCEEEEEecCC---ceEEEEecccccCCcEEEEecccCcEEEeecCCCCcEEEEecC
Confidence 4578888887555555442 4678899999742 21111122223567899999977766654322 23 433445
Q ss_pred cCceEEEecccCCCCeeEEEecCCCCEEEEe-cCCCcee----------------eceEEEEEccCCceEEEecCCCcEE
Q psy7433 85 RQRVIRSRFNAHESPVKCLAIDPHEEFFVTG-AGDGDIK----------------SPVKCLAIDPHEEFFVTGAGDGDIK 147 (213)
Q Consensus 85 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~~~~i~----------------~~v~~~~~~~~~~~l~~~~~dg~i~ 147 (213)
............-.....+++++.++.|..+ ...+.|. ..+..|++. ++.+..+-...+.|.
T Consensus 154 dG~~~~~i~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~~g~~~~~v~~~~~~P~~lav~-~~~lYwtd~~~~~I~ 232 (263)
T d1npea_ 154 DGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSY-GKNLYYTDWKTNSVI 232 (263)
T ss_dssp TSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEEE-TTEEEEEETTTTEEE
T ss_pred CCCCceeeeeecccccceEEEeecCcEEEEEeCCCCEEEEEECCCCCeEEEECCCCCcEEEEEE-CCEEEEEECCCCEEE
Confidence 4433333333334566789998877666444 4445553 334556665 233444444567788
Q ss_pred EEEccCCeeeeeecC
Q psy7433 148 VWSLSGNHLLYNFPG 162 (213)
Q Consensus 148 v~d~~~~~~~~~~~~ 162 (213)
..|..+++.+..+..
T Consensus 233 ~~~~~~g~~~~~~~~ 247 (263)
T d1npea_ 233 AMDLAISKEMDTFHP 247 (263)
T ss_dssp EEETTTTEEEEEECC
T ss_pred EEECCCCccceEECC
Confidence 888877777665543
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=96.29 E-value=0.1 Score=36.96 Aligned_cols=75 Identities=16% Similarity=0.154 Sum_probs=47.4
Q ss_pred eEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCC------CcEEEEe
Q psy7433 10 TSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKK------GDICVID 83 (213)
Q Consensus 10 v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~v~iwd 83 (213)
..+.++.+++++++.+| .....+.+||..+. ........... ..-...+..+++++++.|+.+ ..+.+||
T Consensus 78 ~~~~~~~~~g~i~v~Gg--~~~~~~~~yd~~~~-~w~~~~~~~~~-r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd 153 (387)
T d1k3ia3 78 CPGISMDGNGQIVVTGG--NDAKKTSLYDSSSD-SWIPGPDMQVA-RGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYS 153 (387)
T ss_dssp SCEEEECTTSCEEEECS--SSTTCEEEEEGGGT-EEEECCCCSSC-CSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEE
T ss_pred eeEEEEecCCcEEEeec--CCCcceeEecCccC-ccccccccccc-ccccceeeecCCceeeeccccccccccceeeeec
Confidence 34567889999999986 34578999997432 12222222211 223456777889888888643 3588888
Q ss_pred ccCce
Q psy7433 84 LRQRV 88 (213)
Q Consensus 84 ~~~~~ 88 (213)
..+.+
T Consensus 154 ~~~~~ 158 (387)
T d1k3ia3 154 PSSKT 158 (387)
T ss_dssp TTTTE
T ss_pred CCCCc
Confidence 87653
|
| >d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Soluble quinoprotein glucose dehydrogenase family: Soluble quinoprotein glucose dehydrogenase domain: Soluble quinoprotein glucose dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=96.27 E-value=0.067 Score=39.34 Aligned_cols=55 Identities=9% Similarity=0.046 Sum_probs=36.7
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeee------eecCCceEEEEecC
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFV------CHDQGASSLVFAPQ 66 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~------~~~~~v~~~~~~~~ 66 (213)
...++|+|.|++++|++- ...|.|++++..... ...+..+. .-......++|+|+
T Consensus 27 ~~P~~la~~pdg~llVte---r~~G~i~~v~~~~g~-~~~i~~~~~~~~~~~ge~GLLgia~~Pd 87 (450)
T d1crua_ 27 NKPHALLWGPDNQIWLTE---RATGKILRVNPESGS-VKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (450)
T ss_dssp SSEEEEEECTTSCEEEEE---TTTCEEEEECTTTCC-EEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CCceEEEEeCCCeEEEEE---ecCCEEEEEECCCCc-EeecccCCccccccCCCCceeeEEeCCC
Confidence 567899999999999987 447999999864321 12222111 11245678999984
|
| >d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Comamonas testosteroni [TaxId: 285]
Probab=96.23 E-value=0.03 Score=42.65 Aligned_cols=55 Identities=16% Similarity=0.341 Sum_probs=35.8
Q ss_pred CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCccc
Q psy7433 144 GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 144 g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
|.+.-||+.+++.+-..+...... +.. +. ..++.+++++.||.++.+|..+++++
T Consensus 457 G~l~AiD~~tGk~~W~~~~~~p~~-------gg~--ls-tagglVF~G~~dg~l~A~Da~TGe~L 511 (573)
T d1kb0a2 457 GRLLAWDPVAQKAAWSVEHVSPWN-------GGT--LT-TAGNVVFQGTADGRLVAYHAATGEKL 511 (573)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCC-------CCE--EE-ETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred ccEEEeCCCCCceEeeecCCCCCC-------Cce--EE-EcCCEEEEECCCCeEEEEECCCCcEe
Confidence 456677777777766554432100 111 22 13568888999999999999999765
|
| >d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Ethanol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.19 E-value=0.17 Score=38.46 Aligned_cols=55 Identities=16% Similarity=0.300 Sum_probs=37.1
Q ss_pred CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCccc
Q psy7433 144 GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 144 g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
|.|.-+|+.+++.+-..+.+.... +.+ ++ ..++.+++++.||.++-+|..+++++
T Consensus 466 G~l~AiD~~TG~i~W~~~~~~p~~-------~g~--ls-tagglVF~Gt~dg~l~A~Da~TGe~L 520 (582)
T d1flga_ 466 GSLRAMDPVSGKVVWEHKEHLPLW-------AGV--LA-TAGNLVFTGTGDGYFKAFDAKSGKEL 520 (582)
T ss_dssp EEEEEECTTTCCEEEEEEESSCCC-------SCC--EE-ETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred CeEEEEcCCCCcEEeecCCCCCCc-------cce--eE-EcCCeEEEeCCCCeEEEEECCCCcEe
Confidence 567778888887776655432110 111 11 23568888999999999999999765
|
| >d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: Serum paraoxonase/arylesterase 1, PON1 domain: Serum paraoxonase/arylesterase 1, PON1 species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=96.14 E-value=0.12 Score=36.40 Aligned_cols=32 Identities=3% Similarity=-0.102 Sum_probs=24.5
Q ss_pred CCeEEEEeCCCC-e-EEEEecCCcEEEEeCCCCc
Q psy7433 175 QGVTQLHVDGGS-R-LFSCGADGSMKVRQLPDRD 206 (213)
Q Consensus 175 ~~v~~~~~~~~~-~-l~s~~~d~~i~iw~~~~~~ 206 (213)
...+.++++|++ . +++-+..+.|+.|++....
T Consensus 206 ~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~~ 239 (340)
T d1v04a_ 206 DFANGINISPDGKYVYIAELLAHKIHVYEKHANW 239 (340)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTS
T ss_pred CccceeEECCCCCEEEEEeCCCCeEEEEEeCCCc
Confidence 468899999975 3 4566678899999987654
|
| >d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Low density lipoprotein (LDL) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.04 E-value=0.11 Score=35.13 Aligned_cols=109 Identities=13% Similarity=-0.026 Sum_probs=64.9
Q ss_pred CceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEc--CCCcEEEEecc
Q psy7433 8 KITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAG--KKGDICVIDLR 85 (213)
Q Consensus 8 ~~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~v~iwd~~ 85 (213)
..+..+++.+.+..|..+. ...+.|.+.+++ .......+.........++.+|...+|+... ..+.|.-.++.
T Consensus 77 ~~p~glAvD~~~~~lY~~d--~~~~~I~v~~~~---g~~~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~d 151 (266)
T d1ijqa1 77 QAPDGLAVDWIHSNIYWTD--SVLGTVSVADTK---GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 151 (266)
T ss_dssp SCCCEEEEETTTTEEEEEE--TTTTEEEEEETT---SSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred CCcceEEEeeccceEEEEe--cCCCEEEeEecC---CceEEEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccC
Confidence 3466788887555555442 467789999983 2222233333445678999999666666543 33456666665
Q ss_pred CceEEEecccCCCCeeEEEecCCCCEEEEe-cCCCce
Q psy7433 86 QRVIRSRFNAHESPVKCLAIDPHEEFFVTG-AGDGDI 121 (213)
Q Consensus 86 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~~~~i 121 (213)
...........-.....+++++.++.|..+ ...+.|
T Consensus 152 Gs~~~~l~~~~~~~p~gl~iD~~~~~lYw~d~~~~~I 188 (266)
T d1ijqa1 152 GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI 188 (266)
T ss_dssp SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CCceecccccccceeeEEEeeccccEEEEecCCcCEE
Confidence 444333333334567889999877655554 333444
|
| >d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Prolyl oligopeptidase, N-terminal domain domain: Prolyl oligopeptidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=95.98 E-value=0.17 Score=36.73 Aligned_cols=102 Identities=5% Similarity=-0.060 Sum_probs=58.2
Q ss_pred ceEEEEEeCCCCeEEEeec--cCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCC----------
Q psy7433 9 ITSDFVFLGSCSLVATAGH--SSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKK---------- 76 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~--~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------- 76 (213)
.+..++++|+++++|.+-. ++....|++.|+. +++.+...- .......++|.++++.|+....+
T Consensus 126 ~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~---tg~~~~~~i-~~~~~~~~~W~~D~~~~~Y~~~~~~~~~~~~~~ 201 (430)
T d1qfma1 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVD---GAKELPDVL-ERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTE 201 (430)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETT---TTEEEEEEE-EEECSCCEEECTTSSEEEEEECCCCSSCCSSSC
T ss_pred eecceEecCCCCEEEEEeccccCchheeEEeccC---cceeccccc-ccccccceEEcCCCCEEEEEEeccccCcccccc
Confidence 3556788999999885421 1445679999994 444433211 12223578999999877654322
Q ss_pred ------CcEEEEeccCc--eEEEeccc--CCCCeeEEEecCCCCEEEE
Q psy7433 77 ------GDICVIDLRQR--VIRSRFNA--HESPVKCLAIDPHEEFFVT 114 (213)
Q Consensus 77 ------~~v~iwd~~~~--~~~~~~~~--~~~~i~~~~~~~~~~~l~~ 114 (213)
..|..+.+.+. +....+.. ....+..+..++++++++.
T Consensus 202 ~~~~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i 249 (430)
T d1qfma1 202 TSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLL 249 (430)
T ss_dssp CCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEE
T ss_pred cccCCcceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeE
Confidence 24666766554 11222222 2233455666777776553
|
| >d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Clathrin heavy-chain terminal domain family: Clathrin heavy-chain terminal domain domain: Clathrin heavy-chain terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=95.31 E-value=0.25 Score=34.04 Aligned_cols=118 Identities=13% Similarity=0.104 Sum_probs=67.9
Q ss_pred ccccccCceEEEEEeCCC---CeEEEeeccCCCccEEEEeCCCcccc-cc--eee--eee----ecCCceEEEEecCCCE
Q psy7433 2 TYQCHNKITSDFVFLGSC---SLVATAGHSSESKNVCLWDSLLPQKK-AL--VQA--FVC----HDQGASSLVFAPQHQL 69 (213)
Q Consensus 2 ~l~~h~~~v~~~~~~~~~---~~l~~~g~~s~~~~i~iwd~~~~~~~-~~--~~~--~~~----~~~~v~~~~~~~~~~~ 69 (213)
.++||.+..-.+.+..+. ..|+.+-.+...+.+.|-++..+..+ .. .+. +.. .++-..++..++.-..
T Consensus 190 ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~~~kLhIiEig~~~~g~~~f~kk~vdi~fppea~~DFPvamqvs~kygi 269 (327)
T d1utca2 190 PIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDV 269 (327)
T ss_dssp EECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSCCCTTCCCCCCEEEECCCCTTCTTCCEEEEEEETTTTE
T ss_pred cccceeeeeEEEEcCCCCCCceEEEEEECCCCCcEEEEEEcCCCccCCCCCcceeEEEECCccccCCcEEEEEeeccCCE
Confidence 466776666555543221 23443322234578899988543221 11 111 111 1233457788887778
Q ss_pred EEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecCCCCEEEEecCCC
Q psy7433 70 LISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDPHEEFFVTGAGDG 119 (213)
Q Consensus 70 l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~ 119 (213)
++..+.-|.+.+||++++.++..-+-....|-..+-..+..-++....+|
T Consensus 270 iyviTK~G~i~lyDleTgt~i~~nRIs~~~iF~~a~~~~~~Gi~~VNr~G 319 (327)
T d1utca2 270 VFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKG 319 (327)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTS
T ss_pred EEEEecCcEEEEEEcccccEEEEeecCCCceEEeccCCCCceEEEECCCC
Confidence 88888999999999999998876665556665444444433333333343
|
| >d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Thermostable phytase (3-phytase) family: Thermostable phytase (3-phytase) domain: Thermostable phytase (3-phytase) species: Bacillus amyloliquefaciens [TaxId: 1390]
Probab=95.31 E-value=0.28 Score=34.61 Aligned_cols=175 Identities=10% Similarity=0.146 Sum_probs=95.9
Q ss_pred CCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEe------cCCCEEEEEc-C-C--CcEEEEeccC
Q psy7433 17 GSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFA------PQHQLLISAG-K-K--GDICVIDLRQ 86 (213)
Q Consensus 17 ~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~------~~~~~l~~~~-~-d--~~v~iwd~~~ 86 (213)
|+..+++.+ ...+-|.+||+ .++.+..+. .+.++-+..- -....++.++ . + ..|.+|.+..
T Consensus 38 p~~SlI~gT---dK~~Gl~vYdL----~G~~l~~~~--~Gr~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~~id~ 108 (353)
T d1h6la_ 38 PQNSKLITT---NKKSGLAVYSL----EGKMLHSYH--TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDG 108 (353)
T ss_dssp GGGCEEEEE---ETTSCCEEEET----TCCEEEECC--SSCEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEEET
T ss_pred cCccEEEEE---cCcCCEEEEcC----CCcEEEecc--cCCcCccccccccccCCcceEEEEEeCCcCcceeEEEEEecC
Confidence 355677766 56777999998 355555543 2334433321 1222344444 2 2 3577787752
Q ss_pred -ceEEEecccC-------CCCeeEEEe--cCC-CC-EEEEecCCCcee-----------------------eceEEEEEc
Q psy7433 87 -RVIRSRFNAH-------ESPVKCLAI--DPH-EE-FFVTGAGDGDIK-----------------------SPVKCLAID 131 (213)
Q Consensus 87 -~~~~~~~~~~-------~~~i~~~~~--~~~-~~-~l~~~~~~~~i~-----------------------~~v~~~~~~ 131 (213)
...+..+... ...+..+++ +|. +. ++++...++.+. ..+..+.++
T Consensus 109 ~~~~l~~~~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f~~~~q~EGCVvD 188 (353)
T d1h6la_ 109 KNGTLQSITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAFKMNSQTEGMAAD 188 (353)
T ss_dssp TTTEEEECSCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEEECSSCEEEEEEE
T ss_pred cccccccccccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeeccCCCCccceEEEe
Confidence 2223333221 123556665 554 43 344455555443 567788888
Q ss_pred cCCceEEEecCCCcEEEEEccC-----CeeeeeecCCCCceeEEEecCCCeEEEEeCC----CCe-EEEEecCCcEEEEe
Q psy7433 132 PHEEFFVTGAGDGDIKVWSLSG-----NHLLYNFPGEHARSSFFKHIGQGVTQLHVDG----GSR-LFSCGADGSMKVRQ 201 (213)
Q Consensus 132 ~~~~~l~~~~~dg~i~v~d~~~-----~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~-l~s~~~d~~i~iw~ 201 (213)
+..+.|..+-++..|..++... ...+....+.. ....+..++.-. +++ |+|.-.+++..+||
T Consensus 189 de~~~LyisEE~~Giw~~~a~~~~~~~~~~i~~~~g~~--------l~~D~EGlaiy~~~~~~GylivSsQG~n~f~vyd 260 (353)
T d1h6la_ 189 DEYGSLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRH--------LTPDIEGLTIYYAADGKGYLLASSQGNSSYAIYE 260 (353)
T ss_dssp TTTTEEEEEETTTEEEEEESSTTSCSCCEEEEECSSSS--------CCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEE
T ss_pred CCCCcEEEecCccceEEEEeccCCCccceeeecccCcc--------ccCCccccEEEEcCCCCeEEEEEcCCCCeEEEEe
Confidence 8888888888776665555531 12222222211 125677777542 345 45555678999999
Q ss_pred CCCCccc
Q psy7433 202 LPDRDAV 208 (213)
Q Consensus 202 ~~~~~~~ 208 (213)
.......
T Consensus 261 r~~~~~~ 267 (353)
T d1h6la_ 261 RQGQNKY 267 (353)
T ss_dssp SSTTCCE
T ss_pred cCCCccc
Confidence 8765443
|
| >d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylobacterium extorquens [TaxId: 408]
Probab=95.22 E-value=0.15 Score=38.85 Aligned_cols=55 Identities=22% Similarity=0.299 Sum_probs=35.6
Q ss_pred CcEEEEEccCCeeeeeecCCCCceeEEEecCCCeEEEEeCCCCeEEEEecCCcEEEEeCCCCccc
Q psy7433 144 GDIKVWSLSGNHLLYNFPGEHARSSFFKHIGQGVTQLHVDGGSRLFSCGADGSMKVRQLPDRDAV 208 (213)
Q Consensus 144 g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~i~iw~~~~~~~~ 208 (213)
|.|.-||+.+++.+-........ .++.+. ..++.++.|+.||.++-+|..+++.+
T Consensus 453 G~l~A~D~~TG~~~W~~~~~~~~------~gg~ls----TagglVF~G~~Dg~l~A~Da~TGe~L 507 (596)
T d1w6sa_ 453 GQIKAYNAITGDYKWEKMERFAV------WGGTMA----TAGDLVFYGTLDGYLKARDSDTGDLL 507 (596)
T ss_dssp EEEEEECTTTCCEEEEEEESSCC------CSBCEE----ETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred ceEEEEeCCCCceecccCCCCCC------ccceeE----ecCCEEEEECCCCeEEEEECCCCcEe
Confidence 56777888777776544322110 012221 23567888999999999999999765
|
| >d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=95.03 E-value=0.34 Score=35.15 Aligned_cols=76 Identities=13% Similarity=0.020 Sum_probs=51.5
Q ss_pred ceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcc--------cccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEE
Q psy7433 9 ITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQ--------KKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDIC 80 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~--------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 80 (213)
....+.++|||++++++| ..+.++.++|++... ....+.......-.-...+|+.+|+-.-+---|.+|.
T Consensus 276 sPHGV~vSPDGKyi~VaG--KLs~tVSViD~~Ki~~~~~~~~~~~~~~~~e~elglgPLht~fd~~g~aytslfids~v~ 353 (459)
T d1fwxa2 276 NPHGCNMAPDKKHLCVAG--KLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVV 353 (459)
T ss_dssp SCCCEEECTTSSEEEEEC--TTSSBEEEEEGGGHHHHHHSCC-GGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEE
T ss_pred CCCceEECCCCCEEEEeC--CcCCcEEEEEehhhhhhhcccCCccccEEeecccCcCccccccCCCceEEEEeeccceEE
Confidence 355689999999999998 589999999984210 0111111111233445668888886555667899999
Q ss_pred EEeccC
Q psy7433 81 VIDLRQ 86 (213)
Q Consensus 81 iwd~~~ 86 (213)
-|++..
T Consensus 354 kw~~~~ 359 (459)
T d1fwxa2 354 KWNIED 359 (459)
T ss_dssp EEEHHH
T ss_pred EEecch
Confidence 999853
|
| >d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Soluble quinoprotein glucose dehydrogenase family: Soluble quinoprotein glucose dehydrogenase domain: Soluble quinoprotein glucose dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=94.47 E-value=0.58 Score=34.14 Aligned_cols=54 Identities=13% Similarity=0.297 Sum_probs=38.7
Q ss_pred cCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEE--Eecc------cCCCCeeEEEecCC
Q psy7433 55 DQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIR--SRFN------AHESPVKCLAIDPH 108 (213)
Q Consensus 55 ~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~--~~~~------~~~~~i~~~~~~~~ 108 (213)
-...++|+|.|++++|++--.+|.|++++..+++.. ..+. ..+.....++++|+
T Consensus 26 L~~P~~la~~pdg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pd 87 (450)
T d1crua_ 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (450)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CCCceEEEEeCCCeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCC
Confidence 356789999999998888756799999988776432 2222 12345678999984
|
| >d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nucleoporin domain family: Nucleoporin domain domain: Nucleoporin NUP159 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.37 E-value=0.55 Score=33.45 Aligned_cols=102 Identities=11% Similarity=0.079 Sum_probs=61.5
Q ss_pred ceEEEEEeCCCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCce
Q psy7433 9 ITSDFVFLGSCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRV 88 (213)
Q Consensus 9 ~v~~~~~~~~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~ 88 (213)
.|..++|+-+ .|+.. .++.+..++.. ..........-..++..+.++|. .++....++.+.++++..++
T Consensus 88 ~v~~vafs~d--~l~v~----~~~~l~~~~~~---~l~~~~~~~~~~~~~~~~~~~p~--~~~l~~~~~~~~~~~l~~~~ 156 (381)
T d1xipa_ 88 DVIFVCFHGD--QVLVS----TRNALYSLDLE---ELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKS 156 (381)
T ss_dssp TEEEEEEETT--EEEEE----ESSEEEEEESS---STTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCC
T ss_pred CeEEEEeeCC--EEEEE----eCCCEEEEEee---ccccccccccccccccceecCCc--eeEEEecCCCEEEEEeccCc
Confidence 4777888644 45544 35667778773 22223333333456777777764 45566667888888887765
Q ss_pred EEEecccCCCCeeEEEecCCCCEEEEecCCCceeeceEEEEEccCCceEEEec
Q psy7433 89 IRSRFNAHESPVKCLAIDPHEEFFVTGAGDGDIKSPVKCLAIDPHEEFFVTGA 141 (213)
Q Consensus 89 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~~~v~~~~~~~~~~~l~~~~ 141 (213)
..... ..+.++.|+ ..+.+++|++.|+.++++.
T Consensus 157 ~~~~~----~~v~~~~~~----------------~~~~~v~ws~kgkq~v~~~ 189 (381)
T d1xipa_ 157 TKQLA----QNVTSFDVT----------------NSQLAVLLKDRSFQSFAWR 189 (381)
T ss_dssp EEEEE----ESEEEEEEC----------------SSEEEEEETTSCEEEEEEE
T ss_pred ccccc----CCcceEEec----------------CCceEEEEeCCcEEEEEeC
Confidence 33221 234556664 2346777888888777764
|
| >d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Prolyl oligopeptidase, N-terminal domain domain: Prolyl oligopeptidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=92.29 E-value=1.4 Score=31.74 Aligned_cols=57 Identities=9% Similarity=0.081 Sum_probs=38.4
Q ss_pred ceEEEEecCCCEEEEE-c----CCCcEEEEeccCceEEEe-cccCCCCeeEEEecCCCCEEEEec
Q psy7433 58 ASSLVFAPQHQLLISA-G----KKGDICVIDLRQRVIRSR-FNAHESPVKCLAIDPHEEFFVTGA 116 (213)
Q Consensus 58 v~~~~~~~~~~~l~~~-~----~d~~v~iwd~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~ 116 (213)
+...+++|++++++.+ + .--.++++|+.+++.+.. +. ......+.|.++++.|+...
T Consensus 127 ~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i~--~~~~~~~~W~~D~~~~~Y~~ 189 (430)
T d1qfma1 127 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLE--RVKFSCMAWTHDGKGMFYNA 189 (430)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEE--EECSCCEEECTTSSEEEEEE
T ss_pred ecceEecCCCCEEEEEeccccCchheeEEeccCcceecccccc--cccccceEEcCCCCEEEEEE
Confidence 3456789999988743 2 234699999999986542 22 11235688999998776543
|
| >d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Comamonas testosteroni [TaxId: 285]
Probab=92.02 E-value=0.43 Score=36.04 Aligned_cols=76 Identities=4% Similarity=-0.061 Sum_probs=48.0
Q ss_pred ccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCCCC-eeEEEecCCCC
Q psy7433 32 KNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHESP-VKCLAIDPHEE 110 (213)
Q Consensus 32 ~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~-i~~~~~~~~~~ 110 (213)
|.+.-||+ .+++.+.+.+.. .+...=..+-.+.++++|+.||.++.+|.++|+.+-+++..... -.-+.+..+|+
T Consensus 457 G~l~AiD~---~tGk~~W~~~~~-~p~~gg~lstagglVF~G~~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~Gk 532 (573)
T d1kb0a2 457 GRLLAWDP---VAQKAAWSVEHV-SPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGR 532 (573)
T ss_dssp EEEEEEET---TTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred ccEEEeCC---CCCceEeeecCC-CCCCCceEEEcCCEEEEECCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCE
Confidence 56788887 566666555432 22222223346778999999999999999999999887642221 11244444665
Q ss_pred E
Q psy7433 111 F 111 (213)
Q Consensus 111 ~ 111 (213)
+
T Consensus 533 Q 533 (573)
T d1kb0a2 533 Q 533 (573)
T ss_dssp E
T ss_pred E
Confidence 3
|
| >d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Ethanol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=91.38 E-value=0.49 Score=35.80 Aligned_cols=77 Identities=13% Similarity=0.055 Sum_probs=48.7
Q ss_pred CccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCCC-CeeEEEecCCC
Q psy7433 31 SKNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHES-PVKCLAIDPHE 109 (213)
Q Consensus 31 ~~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~-~i~~~~~~~~~ 109 (213)
.|.|.-+|+ .+++.+...+.+ .++..-..+..+.++++|+.||.++-+|.++|+.+-+++.... .-.-+.+..+|
T Consensus 465 ~G~l~AiD~---~TG~i~W~~~~~-~p~~~g~lstagglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~G 540 (582)
T d1flga_ 465 VGSLRAMDP---VSGKVVWEHKEH-LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDG 540 (582)
T ss_dssp SEEEEEECT---TTCCEEEEEEES-SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETT
T ss_pred CCeEEEEcC---CCCcEEeecCCC-CCCccceeEEcCCeEEEeCCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECC
Confidence 356777777 455555554432 2232222344677888999999999999999999988764222 11225555666
Q ss_pred CE
Q psy7433 110 EF 111 (213)
Q Consensus 110 ~~ 111 (213)
++
T Consensus 541 ~q 542 (582)
T d1flga_ 541 EQ 542 (582)
T ss_dssp EE
T ss_pred EE
Confidence 53
|
| >d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Thermostable phytase (3-phytase) family: Thermostable phytase (3-phytase) domain: Thermostable phytase (3-phytase) species: Bacillus amyloliquefaciens [TaxId: 1390]
Probab=89.26 E-value=2.5 Score=29.61 Aligned_cols=124 Identities=14% Similarity=0.243 Sum_probs=70.7
Q ss_pred CCCEEEEEcCCCcEEEEeccCceEEEecccCCCCeeEEEecC------CCCEEEEecCC--C--cee-------------
Q psy7433 66 QHQLLISAGKKGDICVIDLRQRVIRSRFNAHESPVKCLAIDP------HEEFFVTGAGD--G--DIK------------- 122 (213)
Q Consensus 66 ~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~------~~~~l~~~~~~--~--~i~------------- 122 (213)
+..+++....++-|.+||+. |+.++.+. .+.+..+..-. ...-+++++.. + .+.
T Consensus 39 ~~SlI~gTdK~~Gl~vYdL~-G~~l~~~~--~Gr~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~~id~~~~~l~~ 115 (353)
T d1h6la_ 39 QNSKLITTNKKSGLAVYSLE-GKMLHSYH--TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQS 115 (353)
T ss_dssp GGCEEEEEETTSCCEEEETT-CCEEEECC--SSCEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEEETTTTEEEE
T ss_pred CccEEEEEcCcCCEEEEcCC-CcEEEecc--cCCcCccccccccccCCcceEEEEEeCCcCcceeEEEEEecCccccccc
Confidence 44566666667779999985 66666654 23444433321 11223333321 1 111
Q ss_pred ------------eceEEEEE--ccC-Cc-eEEEecCCCcEEEEEcc---CC----eeeeeecCCCCceeEEEecCCCeEE
Q psy7433 123 ------------SPVKCLAI--DPH-EE-FFVTGAGDGDIKVWSLS---GN----HLLYNFPGEHARSSFFKHIGQGVTQ 179 (213)
Q Consensus 123 ------------~~v~~~~~--~~~-~~-~l~~~~~dg~i~v~d~~---~~----~~~~~~~~~~~~~~~~~~~~~~v~~ 179 (213)
..+..+++ +|. +. ++++...+|.+..|.+. .+ +.+..+... ..+..
T Consensus 116 ~~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f~~~-----------~q~EG 184 (353)
T d1h6la_ 116 ITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAFKMN-----------SQTEG 184 (353)
T ss_dssp CSCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEEECS-----------SCEEE
T ss_pred ccccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeeccCCC-----------Cccce
Confidence 23566666 554 44 56777788999888773 22 233444432 46888
Q ss_pred EEeCCC-CeEEEEecCCcEEEEeCC
Q psy7433 180 LHVDGG-SRLFSCGADGSMKVRQLP 203 (213)
Q Consensus 180 ~~~~~~-~~l~s~~~d~~i~iw~~~ 203 (213)
+.+++. ++|+.+-.+..+..++..
T Consensus 185 CVvDde~~~LyisEE~~Giw~~~a~ 209 (353)
T d1h6la_ 185 MAADDEYGSLYIAEEDEAIWKFSAE 209 (353)
T ss_dssp EEEETTTTEEEEEETTTEEEEEESS
T ss_pred EEEeCCCCcEEEecCccceEEEEec
Confidence 888874 568777776655555543
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=89.23 E-value=1.2 Score=33.39 Aligned_cols=60 Identities=12% Similarity=0.134 Sum_probs=40.7
Q ss_pred ccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEeccc
Q psy7433 32 KNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNA 95 (213)
Q Consensus 32 ~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~ 95 (213)
|.+.-+|+ .+++.+..... ......-...-.+.+++.|+.||.++-+|.++|+.+-+++.
T Consensus 438 G~l~A~D~---~tGk~~W~~~~-~~~~~gg~l~TagglVF~G~~dg~l~A~Da~tGe~LW~~~l 497 (560)
T d1kv9a2 438 GALLAWDP---VKQKAAWKVPY-PTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEA 497 (560)
T ss_dssp EEEEEEET---TTTEEEEEEEE-SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred cceEEEeC---CCCeEeeeccC-CCCCCCceeEECCCEEEEECCCCcEEEEECCCCcEeEEEEC
Confidence 56777777 45555554432 22222222334567888999999999999999999988764
|
| >d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=89.09 E-value=0.85 Score=34.38 Aligned_cols=76 Identities=9% Similarity=-0.079 Sum_probs=44.4
Q ss_pred ccEEEEeCCCcccccceeeeeeecCCceEEEEecCCCEEEEEcCCCcEEEEeccCceEEEecccCCC-CeeEEEecCCCC
Q psy7433 32 KNVCLWDSLLPQKKALVQAFVCHDQGASSLVFAPQHQLLISAGKKGDICVIDLRQRVIRSRFNAHES-PVKCLAIDPHEE 110 (213)
Q Consensus 32 ~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~-~i~~~~~~~~~~ 110 (213)
|.|.-+|+ .+++.+.+... .....+-.....+.+++.++.||.++-+|.++|+.+-+++.... .-.-+.+..+|+
T Consensus 444 G~l~AiD~---~TG~~~W~~~~-~~~~~~g~l~TagglVf~G~~dg~l~A~Da~tGe~lW~~~l~~~~~a~P~ty~~dGk 519 (571)
T d2ad6a1 444 GQIRAFDL---TTGKAKWTKWE-KFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGK 519 (571)
T ss_dssp EEEEEECT---TTCCEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred ccEEEecc---CCCceeeEcCC-CCCCCcceeEecCCEEEEECCCCeEEEEECCCCcEEEEEECCCCceecceEEEECCE
Confidence 45666666 44444444332 11111111223466888899999999999999999987753221 122355555666
Q ss_pred E
Q psy7433 111 F 111 (213)
Q Consensus 111 ~ 111 (213)
+
T Consensus 520 q 520 (571)
T d2ad6a1 520 Q 520 (571)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylobacterium extorquens [TaxId: 408]
Probab=85.87 E-value=5.6 Score=29.93 Aligned_cols=72 Identities=8% Similarity=0.064 Sum_probs=42.6
Q ss_pred CCCeEEEeeccCCCccEEEEeCCCcccccceeeeeeec-----------CCceEEEEecC----CCEEEEEcCCCcEEEE
Q psy7433 18 SCSLVATAGHSSESKNVCLWDSLLPQKKALVQAFVCHD-----------QGASSLVFAPQ----HQLLISAGKKGDICVI 82 (213)
Q Consensus 18 ~~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~~~~~-----------~~v~~~~~~~~----~~~l~~~~~d~~v~iw 82 (213)
++.+++++ +.++.+...|.. .+++.+..+.... ..-+.+++.++ ..+++.++.|+.|.-.
T Consensus 62 ~g~ly~~t---~~~~~v~a~d~~--~tG~~~W~~~~~~~~~~~~~~~~~~~~RGv~~~~~~~~~~~~v~~~t~dg~l~Al 136 (596)
T d1w6sa_ 62 DGKMYIHT---SFPNNTFALGLD--DPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAAL 136 (596)
T ss_dssp TTEEEEEC---STTTCEEEEETT--CTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEE
T ss_pred CCEEEEee---CCCCcEEEEeCC--CCCCEEEEecCCCCcccccccccccccceeEEecCCCCCceEEEEEeCCCCeEee
Confidence 34444544 345667666652 2455555443110 01133455432 3468888899999999
Q ss_pred eccCceEEEecc
Q psy7433 83 DLRQRVIRSRFN 94 (213)
Q Consensus 83 d~~~~~~~~~~~ 94 (213)
|.++++.+..+.
T Consensus 137 da~tG~~~w~~~ 148 (596)
T d1w6sa_ 137 NAETGETVWKVE 148 (596)
T ss_dssp ETTTCCEEEEEE
T ss_pred ccccCceecccc
Confidence 999998877664
|
| >d2ebsa1 b.69.13.1 (A:4-430) Oligoxyloglucan reducing end-specific cellobiohydrolase {Yeast (Geotrichum sp. M128) [TaxId: 203496]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Oligoxyloglucan reducing end-specific cellobiohydrolase family: Oligoxyloglucan reducing end-specific cellobiohydrolase domain: Oligoxyloglucan reducing end-specific cellobiohydrolase species: Yeast (Geotrichum sp. M128) [TaxId: 203496]
Probab=80.33 E-value=7.7 Score=27.37 Aligned_cols=137 Identities=13% Similarity=0.143 Sum_probs=66.9
Q ss_pred ccCceEEEEEeCC-CCeEEEeeccCCCccEEEEeCCCcccccceeee----eeecCCceEEEEecCC-CEEEEEcCC---
Q psy7433 6 HNKITSDFVFLGS-CSLVATAGHSSESKNVCLWDSLLPQKKALVQAF----VCHDQGASSLVFAPQH-QLLISAGKK--- 76 (213)
Q Consensus 6 h~~~v~~~~~~~~-~~~l~~~g~~s~~~~i~iwd~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~-~~l~~~~~d--- 76 (213)
-.+.|.+|+++|. .+++.++ ...+-|..-+ +...+.+.+... ......+.+|+++|.. +.++.+..+
T Consensus 10 ~gg~~~~i~~~P~~~~~~ya~---~~~gGv~~S~-dgG~tW~~~~~~~~~~~~~~~~~~~iavdp~np~~vy~~tg~~~~ 85 (427)
T d2ebsa1 10 GGGYITGIVAHPKTKDLLYAR---TDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVG 85 (427)
T ss_dssp BCSCEEEEEECSSSTTCEEEE---ESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTT
T ss_pred CCCcEEEEEECCCCCCEEEEE---ecCCCEEEEE-CCCCceEECCCCCCCCCcccccEeEEEECCCCCCEEEEEeccccC
Confidence 4578999999995 4455444 3445443322 111222222111 1123457899999854 455544321
Q ss_pred -CcEEEEeccC-ceEEEecc---------cCCCCeeEEEecCC-CCEEEEecCCCcee----------------------
Q psy7433 77 -GDICVIDLRQ-RVIRSRFN---------AHESPVKCLAIDPH-EEFFVTGAGDGDIK---------------------- 122 (213)
Q Consensus 77 -~~v~iwd~~~-~~~~~~~~---------~~~~~i~~~~~~~~-~~~l~~~~~~~~i~---------------------- 122 (213)
....+|.-.. |+--..+. ........+.++|. ...+.++..++.+.
T Consensus 86 ~~~~gi~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~i~v~P~~~~~v~~~~~~~gl~~S~D~G~tW~~~~~~~~~~~~~ 165 (427)
T d2ebsa1 86 DEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIWKSSDRAKTWTNVTSIPDAFTNG 165 (427)
T ss_dssp SSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEECTTCTTCEEEECSSSCEEEESSTTSSCEECTTSSCCCCSS
T ss_pred CcCccEEEeCCCCccceeecCCcccCccccCccceeEEEECCCccCcccccccccceeeecCCCceeeecccCcccccCC
Confidence 1233454332 32211111 01123557888885 44555555444332
Q ss_pred eceEEEEEccCCc--eEEEecCCCcE
Q psy7433 123 SPVKCLAIDPHEE--FFVTGAGDGDI 146 (213)
Q Consensus 123 ~~v~~~~~~~~~~--~l~~~~~dg~i 146 (213)
..+..+.++|... +++.+...+.|
T Consensus 166 ~~~~~i~~~p~~~~~~y~~~~~~~gi 191 (427)
T d2ebsa1 166 IGYTSVIFDPERNGTIYASATAPQGM 191 (427)
T ss_dssp SCEEEEEECTTSTTCEEEEESSTTCE
T ss_pred ccceEEEecccccceeeeeeeecccc
Confidence 3367888988643 33344433334
|