Psyllid ID: psy7466

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------34
Protein Sequence
MAFEHRCRSSRQISRSELICVRKEGEEKEEERVETQLFQRRTRQRGVTEPETITGKRKRSLDDSQEEVIVKKDGRGRPKGSLNKVKREVVESPSPKREIDAPIVKRKKKDEILLMKALDEEMFKMDEENNKEMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLEKHEVFQCTQCEKYYRSQSTLDVHVSKKHPAGTGKVKRDIKPNTNILTVTPNRRSARNDSTKATVKTETEVKVKIEPVADIPIKKENVVETVQ
Secondary Structure (PSIPRED)
cccccccccccccccHHHHHcccccHHHHHHHHHHcccccccccccccccccccccccccccccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHcccccEEEcccEEEEEEcccccccHccccHHHHHHHHHHccccccHHHcccccccccccccEEEEEEccccccccccccccccccccccccccccccHHHccccccEEEEEccccccEccccHHHHHHHHccccccEEccccccEEccccHHHHHccccccccccccccccccHHHHHHHHHcccccccEccccccEcccccHHHHHHHHHHccccccccEcccccccEcccHHHHEEEcccccccEcccccccEcccHHHHHHHHHccccccccccccccccccEEEEcccccccccccEEEEEEEccEEEEcccccccccccccHHHHHcc
Coil and Loop (DISEMBL)
mafehrcrssrqiSRSELICVRKEGEEKEEERVETQLFQRrtrqrgvtepetitgkrkrslddsqeevivkkdgrgrpkgslnkvkrevvespspkreidapivkrkKKDEILLMKALDEEMFKMDEENNKEMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFtqsgrssfkcAICFEYFSLLESLETHITRrhigiceepyqcsqcslcfdqgsllkahvlekhevfqctqcekyyrsqstldvhvskkhpagtgkvkrdikpntniltvtpnrrsarndstkatvktETEVKvkiepvadipikkeNVVETVQ
Flexible Loop (DISEMBL)
mafehrcrssrqisrselicvrkegeekeeervetqlfqrrtrqrgvtepetitgkrkrslddsqeevivkkdgrgrpkgslnkvkrevvespspkreidapivkrkkkdEILLMKALDEEMFKMDEENNKEMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLEKHEVFQCTQCEKYYrsqstldvhvskkhpagtgkvkrdikpntniltvtpnrrsarndstkatvktetevkvkiepvadipikkenvvetvq
Low Complexity Region (SEG)
MAFEHRCRSSRQISRSELICvrkegeekeeerveTQLFQRRTRQRGVTEPETITGKRKRSLDDSQEEVIVKKDGRGRPKGSLNKVKREVVESPSPKREIDAPIVKRKKKDEILLMKALDEEMFKMDEENNKEMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLEKHEVFQCTQCEKYYRSQSTLDVHVSKKHPAGTGKVKRDIKPNTNILTVTPNRRSARNDStkatvktetevkvkiepvADIPIKKENVVETVQ
Disordered region (IsUnstruct)
*****************************************************************************************************************************************QGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLEKHEVFQCTQCEKYYRSQSTLDVH*********************************************************************
Disordered Region (DISOPRED)
*********************************************************************************************************RKKKDEILLMKALDEEMFKMDEENNKEMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLEKHEVFQCTQCEKYYRSQSTLDVHVSKKHPAGTGKVKRDIKP***********************************VADIPIKKE*******
Disordered Region (DISEMBL)
*************SRSELICVRK******************************************EEVIVKKDGRGRPKGSLNKV***********REIDAPIVKRKKKDEILLMKALDEEMFKMDEENNKEMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLEKHEVFQCTQCEKYYRSQSTLDVHVSKKHPAGTGKVKRDIKPNTNILTVTPN***************ETEVKVKIEPVADIPIKKENVVETVQ
Disordered Region (DISPRO)
**F*HRCRSSRQISRSELICVRKEGEEKEEERVETQLFQRRTRQR*******************QEEVIVKKDGR**********************EIDAPIVKRKKKDEILLMKALDEEMFKMDEENNKEMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLEKHEVFQCTQCEKYYRSQSTLDVHVSKKHPAGTGKV*R****NTNILTVTPNRRSARNDSTKATVKTETEVKVKIEPVADIPIKKENVV*TVQ
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAFEHRCRSSRQISRSELICVRKEGEEKEEERVETQLFQRRTRQRGVTEPETITGKRKRSLDDSQEEVIVKKDGRGRPKGSLNKVKREVVESPSPKREIDAPIVKRKKKDEILLxxxxxxxxxxxxxxxxxxxxxISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLEKHEVFQCTQCEKYYRSQSTLDVHVSKKHPAGTGKVKRDIKPNTNILTVTPNRRSARNDSTKATVKTETEVKVKIEPVADIPIKKENVVETVQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	338	2.2.26 [Sep-21-2011]
Q60636	856	PR domain zinc finger pro	yes	N/A	0.505	0.199	0.282	2e-10
Q3ZCX4	644	Zinc finger protein 568 O	yes	N/A	0.366	0.192	0.328	2e-10
O75626	825	PR domain zinc finger pro	no	N/A	0.467	0.191	0.280	1e-09
Q1H9T6	681	Zinc finger and BTB domai	no	N/A	0.426	0.211	0.314	5e-09
Q80X44	710	Zinc finger and BTB domai	no	N/A	0.526	0.250	0.259	7e-09
Q9UL36	1845	Zinc finger protein 236 O	no	N/A	0.352	0.064	0.272	1e-08
P10074	688	Zinc finger and BTB domai	no	N/A	0.426	0.209	0.308	2e-08
Q96BR6	464	Zinc finger protein 669 O	no	N/A	0.369	0.269	0.314	2e-08
Q5R633	688	Zinc finger and BTB domai	no	N/A	0.426	0.209	0.308	2e-08
Q5JNZ3	666	Zinc finger protein 311 O	no	N/A	0.366	0.186	0.331	2e-08

>sp|Q60636|PRDM1_MOUSE PR domain zinc finger protein 1 OS=Mus musculus GN=Prdm1 PE=1 SV=1

 Score = 67.4 bits (163), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 38/209 (18%)

Query: 84  KVKREVVESPSPKREIDAPIVKRKKKDEILLMKALDEEMFKMDEENNKEMERISQGLEYQ 143
           K    V+ +PS    ++  ++K K+      M       + + ++N K        ++Y+
Sbjct: 563 KATSSVMAAPSTDGAMN--LIKNKRN-----MTGYKTLPYPLKKQNGK--------IKYE 607

Query: 144 CSVCSQVFIEKKNLSKHF--------FKCLM---KFTQKKKNLSKHFFKCLMKFTQSGRS 192
           C+VC++ F +  NL  H         FKC      FTQ   +L KH+         +G  
Sbjct: 608 CNVCAKTFGQLSNLKVHLRVHSGERPFKCQTCNKGFTQLA-HLQKHYL------VHTGEK 660

Query: 193 SFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAH--VLEKHEV 250
             +C +C + FS   +L+TH+ R H G  E+PYQC  C   F Q   LK H  +  +   
Sbjct: 661 PHECQVCHKRFSSTSNLKTHL-RLHSG--EKPYQCKVCPAKFTQFVHLKLHKRLHTRERP 717

Query: 251 FQCTQCEKYYRSQSTLDVHVSKKHPAGTG 279
            +C QC K Y    +L VH+    PAG  
Sbjct: 718 HKCAQCHKSYIHLCSLKVHLKGNCPAGPA 746

Transcriptional repressor that binds specifically to the PRDI element in the promoter of the beta-interferon gene. Drives the maturation of B-lymphocytes into Ig secreting cells.
Mus musculus (taxid: 10090)

>sp|Q3ZCX4|ZN568_HUMAN Zinc finger protein 568 OS=Homo sapiens GN=ZNF568 PE=2 SV=2

 Score = 66.6 bits (161), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 80/152 (52%), Gaps = 28/152 (18%)

Query: 134 ERISQGLE-YQCSVCSQVFIEKKNLSKH-----------FFKCLMKFTQKKKNLSKHFFK 181
           +RI  G + Y C+VC + F +K NL++H             +C   F+Q++ NL +H   
Sbjct: 493 QRIHTGEKPYACTVCGKAFSQKSNLTEHEKIHTGEKPYHCNQCGKAFSQRQ-NLLEH--- 548

Query: 182 CLMKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLL- 240
              +   +G   FKC  C + FS + SL  H+ R H G  E+PY+C++C   F Q SLL 
Sbjct: 549 ---EKIHTGEKPFKCNECGKAFSRISSLTLHV-RSHTG--EKPYECNKCGKAFSQCSLLI 602

Query: 241 ---KAHVLEKHEVFQCTQCEKYYRSQSTLDVH 269
              ++H  EK   F+C +C K +  +++L +H
Sbjct: 603 IHMRSHTGEK--PFECNECGKAFSQRASLSIH 632

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|O75626|PRDM1_HUMAN PR domain zinc finger protein 1 OS=Homo sapiens GN=PRDM1 PE=1 SV=2

 Score = 64.3 bits (155), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 86/189 (45%), Gaps = 31/189 (16%)

Query: 103 IVKRKKKDEILLMKALDEEMFKMDEENNK--------EMERISQGLEYQCSVCSQVFIEK 154
           +V+ K     +   + DE M  +  + N          +++ +  ++Y+C+VC++ F + 
Sbjct: 528 VVQPKATSAAMAAPSSDEAMNLIKNKRNMTGYKTLPYPLKKQNGKIKYECNVCAKTFGQL 587

Query: 155 KNLSKHF--------FKCLM---KFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAICFEYF 203
            NL  H         FKC      FTQ   +L KH+         +G    +C +C + F
Sbjct: 588 SNLKVHLRVHSGERPFKCQTCNKGFTQ-LAHLQKHY------LVHTGEKPHECQVCHKRF 640

Query: 204 SLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAH--VLEKHEVFQCTQCEKYYR 261
           S   +L+TH+ R H G  E+PYQC  C   F Q   LK H  +  +    +C+QC K Y 
Sbjct: 641 SSTSNLKTHL-RLHSG--EKPYQCKVCPAKFTQFVHLKLHKRLHTRERPHKCSQCHKNYI 697

Query: 262 SQSTLDVHV 270
              +L VH+
Sbjct: 698 HLCSLKVHL 706

Transcriptional repressor that binds specifically to the PRDI element in the promoter of the beta-interferon gene. Drives the maturation of B-lymphocytes into Ig secreting cells.

Homo sapiens (taxid: 9606)

>sp|Q1H9T6|ZBT48_MOUSE Zinc finger and BTB domain-containing protein 48 OS=Mus musculus GN=Zbtb48 PE=1 SV=1

 Score = 62.4 bits (150), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 69/162 (42%), Gaps = 18/162 (11%)

Query: 120 EEMFKMDEENNKEMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHF 179
           +E F+   E    M   +  + Y+CS CSQ F++KK+L  H  K        K +     
Sbjct: 349 QETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKL---HGAPKPHACPTC 405

Query: 180 FKCLM---------KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC 230
            KC +          F   G   F C  C    S    L+ HI  +H    E PY C  C
Sbjct: 406 AKCFLSRTELQLHEAFKHRGEKLFVCEECGHRASSRNGLQMHIKAKHRN--ERPYVCEFC 463

Query: 231 SLCFDQGSLLKAHVLEKH---EVFQCTQCEKYYRSQSTLDVH 269
           S  F Q + L  H L  H   + FQC  C K +R+Q++LD H
Sbjct: 464 SHAFTQKANLNMH-LRTHTGEKPFQCHLCGKTFRTQASLDKH 504

Binds to and regulates the J and/or S elements in MHC II promoter.

Mus musculus (taxid: 10090)

>sp|Q80X44|ZBT24_MOUSE Zinc finger and BTB domain-containing protein 24 OS=Mus musculus GN=Zbtb24 PE=1 SV=1

 Score = 61.6 bits (148), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 89/220 (40%), Gaps = 42/220 (19%)

Query: 142 YQCSVCSQVFIEKKNLSKHF--------FKC--LMKFTQKKKNLSKHF-----------F 180
           Y C+VC +    K +L +H         F C    K+  +K+ L  H+            
Sbjct: 349 YTCTVCGKALTTKHSLLEHMSLHSGQKSFTCDQCGKYFSQKRQLKSHYRVHTGHSLPECS 408

Query: 181 KCLMKF-----------TQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQ 229
            C  KF           T +G   F C IC + F+   SL+THI R H G  E+PY CS 
Sbjct: 409 HCHRKFMDVSQLKKHLRTHTGEKPFTCEICGKSFTAKSSLQTHI-RIHRG--EKPYSCSI 465

Query: 230 CSLCFDQGSLLKAHVL--EKHEVFQCTQCEKYY----RSQSTLDVHVSKKHPAGTGKVK- 282
           C  CF   S  + H +     + F C +C   +      ++ L +H  +KH A +  V  
Sbjct: 466 CGKCFSDSSAKRRHCILHTGKKPFSCPECGLQFARLDNLKAHLKIHSKEKHTADSSSVSG 525

Query: 283 RDIKPNTNILTVTPNRRSARNDSTKATVKTETEVKVKIEP 322
            ++    NIL + P + S   +     + T++   +   P
Sbjct: 526 SNVDEGRNILQLQPYQLSTSGEQEIQLLVTDSVHNINFMP 565

May be involved in BMP2-induced transcription.

Mus musculus (taxid: 10090)

>sp|Q9UL36|ZN236_HUMAN Zinc finger protein 236 OS=Homo sapiens GN=ZNF236 PE=2 SV=2

 Score = 60.8 bits (146), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 35/154 (22%)

Query: 130 NKEMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQS 189
           N+ ++R   G  Y C  C + F                  QK   L++H          +
Sbjct: 187 NRNIDR--SGFTYSCPHCGKTF------------------QKPSQLTRHIR------IHT 220

Query: 190 GRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLEKHE 249
           G   FKC+ C + F+   +L+TH+ + H G  E+P+ C+ C   F Q   L++HV   H 
Sbjct: 221 GERPFKCSECGKAFNQKGALQTHMIK-HTG--EKPHACAFCPAAFSQKGNLQSHVQRVHS 277

Query: 250 ------VFQCTQCEKYYRSQSTLDVHVSKKHPAG 277
                  + CT+C   ++S  +L+ H+SK H  G
Sbjct: 278 EVKNGPTYNCTECSCVFKSLGSLNTHISKMHMGG 311

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|P10074|ZBT48_HUMAN Zinc finger and BTB domain-containing protein 48 OS=Homo sapiens GN=ZBTB48 PE=1 SV=2

 Score = 60.5 bits (145), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 69/162 (42%), Gaps = 18/162 (11%)

Query: 120 EEMFKMDEENNKEMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHF 179
           +E F+   E    M   +  + Y+CS CSQ F++KK+L  H  K        K +     
Sbjct: 356 QETFRRRMELRVHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKL---HGAPKPHACPTC 412

Query: 180 FKCLM---------KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC 230
            KC +          F   G   F C  C    S    L+ HI  +H    E P+ C  C
Sbjct: 413 AKCFLSRTELQLHEAFKHRGEKLFVCEECGHRASSRNGLQMHIKAKHRN--ERPHVCEFC 470

Query: 231 SLCFDQGSLLKAHVLEKH---EVFQCTQCEKYYRSQSTLDVH 269
           S  F Q + L  H L  H   + FQC  C K +R+Q++LD H
Sbjct: 471 SHAFTQKANLNMH-LRTHTGEKPFQCHLCGKTFRTQASLDKH 511

Binds to and regulates the J and/or S elements in MHC II promoter.

Homo sapiens (taxid: 9606)

>sp|Q96BR6|ZN669_HUMAN Zinc finger protein 669 OS=Homo sapiens GN=ZNF669 PE=2 SV=2

 Score = 60.5 bits (145), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 71/156 (45%), Gaps = 31/156 (19%)

Query: 134 ERISQGLE-YQCSVCSQVFIEKKNLSKHF-------------FKC--LMKFTQKKKNLSK 177
           E IS GL+  +CS+C +VF+    L++H              +KC    KF      + +
Sbjct: 180 ENISTGLKPCECSICGKVFVRHSLLNRHILAHSGYKPYGEKQYKCEQCGKFFVSVPGVRR 239

Query: 178 HFFKCLMKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFD-Q 236
           H          SG  ++KC IC + F  L S+E H  R H G  E+PY+C QC   F   
Sbjct: 240 HMI------MHSGNPAYKCTICGKAFYFLNSVERH-QRTHTG--EKPYKCKQCGKAFTVS 290

Query: 237 GSLL---KAHVLEKHEVFQCTQCEKYYRSQSTLDVH 269
           GS L   + H  EK   ++C +C K +R   +   H
Sbjct: 291 GSCLIHERTHTGEK--PYECKECGKTFRFSCSFKTH 324

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q5R633|ZBT48_PONAB Zinc finger and BTB domain-containing protein 48 OS=Pongo abelii GN=ZBTB48 PE=2 SV=1

 Score = 60.5 bits (145), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 69/162 (42%), Gaps = 18/162 (11%)

Query: 120 EEMFKMDEENNKEMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHF 179
           +E F+   E    M   +  + Y+CS CSQ F++KK+L  H  K        K +     
Sbjct: 356 QETFRRRMELRVHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKL---HGAPKPHACPTC 412

Query: 180 FKCLM---------KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC 230
            KC +          F   G   F C  C    S    L+ HI  +H    E P+ C  C
Sbjct: 413 AKCFLSRTELQLHEAFKHRGEKLFVCEECGHRASSRNGLQMHIKAKHRN--ERPHVCEFC 470

Query: 231 SLCFDQGSLLKAHVLEKH---EVFQCTQCEKYYRSQSTLDVH 269
           S  F Q + L  H L  H   + FQC  C K +R+Q++LD H
Sbjct: 471 SHAFTQKANLNMH-LRTHTGEKPFQCHLCGKTFRTQASLDKH 511

Binds to and regulates the J and/or S elements in MHC II promoter.

Pongo abelii (taxid: 9601)

>sp|Q5JNZ3|ZN311_HUMAN Zinc finger protein 311 OS=Homo sapiens GN=ZNF311 PE=2 SV=2

 Score = 60.5 bits (145), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 64/145 (44%), Gaps = 21/145 (14%)

Query: 142 YQCSVCSQVFIEKKNLSKH--------FFKCL--MKFTQKKKNLSKHFFKCLMKFTQSGR 191
           YQC  C + F +K  L+ H         +KCL   K    K NL+ H      +   +G 
Sbjct: 499 YQCRDCGKTFQDKHCLTIHQRIHTGEKPYKCLECGKAFSGKSNLTNH------RRIHTGE 552

Query: 192 SSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAH--VLEKHE 249
              KC +C   F     L  H  R H G  E+PY CS+C   F QGS L  H  V    +
Sbjct: 553 KPHKCEVCGMAFHHSSVLRQH-KRIHTG--EKPYTCSECGTSFRQGSALIGHKRVHTGEK 609

Query: 250 VFQCTQCEKYYRSQSTLDVHVSKKH 274
            ++C +C K +R  S L  H  +KH
Sbjct: 610 PYECEECGKAFRVSSNLTGHKKRKH 634

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	338
195168036	464	GL17891 [Drosophila persimilis] gi|19410	0.346	0.252	0.342	9e-10
380012665	868	PREDICTED: uncharacterized protein LOC10	0.523	0.203	0.235	2e-09
390349885	483	PREDICTED: zinc finger protein 845-like	0.461	0.322	0.338	4e-09
125859109	882	Prdm1 protein [Mus musculus]	0.5	0.191	0.285	4e-09
449486830	1265	PREDICTED: taste receptor type 1 member	0.431	0.115	0.329	5e-09
383864306	1048	PREDICTED: zinc finger protein 850-like	0.390	0.125	0.254	5e-09
328788084	828	PREDICTED: hypothetical protein LOC10057	0.523	0.213	0.231	5e-09
350420867	879	PREDICTED: zinc finger protein 408-like	0.446	0.171	0.251	6e-09
338710060	1090	PREDICTED: zinc finger protein 850 [Equu	0.375	0.116	0.337	6e-09
397560783	823	PR domain containing 1 with ZNF domain [	0.5	0.205	0.285	8e-09

>gi|195168036|ref|XP_002024838.1| GL17891 [Drosophila persimilis] gi|194108268|gb|EDW30311.1| GL17891 [Drosophila persimilis]

 Score = 70.9 bits (172), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 67/140 (47%), Gaps = 23/140 (16%)

Query: 142 YQCSVCSQVFIEKKNLSKHF-----------FKCLMKFTQKKKNLSKHFFKCLMKFTQSG 190
           YQCS CS+ F +K NL  H             +C   F Q+  NL+ H        T +G
Sbjct: 263 YQCSQCSKAFAQKSNLDIHMRNHTGERPYQCTQCSKAFVQQA-NLTAHMC------THTG 315

Query: 191 RSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLEK--H 248
              ++C+ C + F+    L+ H+ R H G  E PYQCSQCS  F Q + LKAH+      
Sbjct: 316 ERPYQCSQCSKAFAQRSHLDIHM-RNHTG--ERPYQCSQCSKAFAQQANLKAHICRHTGE 372

Query: 249 EVFQCTQCEKYYRSQSTLDV 268
             F+C  C + Y ++  L V
Sbjct: 373 RPFKCPHCPRDYTNKGHLYV 392

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380012665|ref|XP_003690398.1| PREDICTED: uncharacterized protein LOC100864932 [Apis florea]

 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 99/229 (43%), Gaps = 52/229 (22%)

Query: 141 EYQCSVCSQVFIEKKNLSKHF---------FKCLMKFTQKKKNLSKHF-----------F 180
           +++C +C + F+ +  L KH          F C++     K +L +H             
Sbjct: 550 DHKCEICGRAFVRRDALKKHLECLHRDVKSFLCVICNKTFKGHLPQHMRTHARDRPHGCA 609

Query: 181 KCLMKFTQ-----------SGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQ 229
            C  +F Q           SG+  F+C +C++ F+   +L+ H TRRH G  E P++C++
Sbjct: 610 TCGQRFAQKSQLTVHQRTHSGQRPFRCLVCWQAFAHSTALKLH-TRRHTG--ERPFKCAE 666

Query: 230 CSLCFDQGSLLKAH---VLEKHEVFQCTQCEKYYRSQSTLDVHVSKKHPAGTGKVKRDIK 286
           C+  F Q    K H   +  ++E + C +C+ ++R ++ L+ H    HP    K + D+ 
Sbjct: 667 CNAGFTQLPHWKKHMKCIHGRNEPYACKKCKSFFRIKNDLECHEKTCHPE--SKSEHDVS 724

Query: 287 PNTNILTVTPNRRSARNDSTKATVKTETEVKVKIEPVADIPIKKENVVE 335
            N             R DS  AT+   T V + ++      +  E + +
Sbjct: 725 NN-------------RMDSITATIIPTTSVSMTLQSTTSSLLSNEIITD 760

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|390349885|ref|XP_003727303.1| PREDICTED: zinc finger protein 845-like [Strongylocentrotus purpuratus]

 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/177 (33%), Positives = 84/177 (47%), Gaps = 21/177 (11%)

Query: 106 RKKKDEILLMKALDEEMFKMDEENNKEMERISQGLEYQCSVCSQVFIEKKNLSKHF---- 161
           RK   E L   +  +++F         +   S    YQCS C +VF  + NL++H     
Sbjct: 47  RKHTGEKLFTCSQCDKVFTCQSNLTTHLRTHSGEKPYQCSYCDKVFSTQGNLTRHLRTHT 106

Query: 162 ----FKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAICFEYFSLLESLETHITRRH 217
               FKC    T   + +S     C ++ T +G   FKC+ C E FS   SL  H+ R H
Sbjct: 107 GEKPFKCSQCSTCFSQRIS---LNCHLR-THTGEKPFKCSQCDEGFSRRSSLIRHL-RTH 161

Query: 218 IGICEEPYQCSQCSLCFDQ-GSL---LKAHVLEKHEVFQCTQCEKYYRSQSTLDVHV 270
            G  E+PYQCS C   F Q  SL   L+ H+ EK   F+C+QC+K +  Q  L  H+
Sbjct: 162 SG--EKPYQCSHCDKTFAQTNSLTCQLRTHLGEK--TFKCSQCDKGFTCQINLITHL 214

Source: Strongylocentrotus purpuratus

Species: Strongylocentrotus purpuratus

Genus: Strongylocentrotus

Family: Strongylocentrotidae

Order: Echinoida

Class: Echinoidea

Phylum: Echinodermata

Superkingdom: Eukaryota

>gi|125859109|gb|AAI29802.1| Prdm1 protein [Mus musculus]

 Score = 68.6 bits (166), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 92/207 (44%), Gaps = 38/207 (18%)

Query: 84  KVKREVVESPSPKREIDAPIVKRKKKDEILLMKALDEEMFKMDEENNKEMERISQGLEYQ 143
           K    V+ +PS    ++  ++K K+      M       + + ++N K        ++Y+
Sbjct: 589 KATSSVMAAPSTDGAMN--LIKNKRN-----MTGYKTLPYPLKKQNGK--------IKYE 633

Query: 144 CSVCSQVFIEKKNLSKHF--------FKCLM---KFTQKKKNLSKHFFKCLMKFTQSGRS 192
           C+VC++ F +  NL  H         FKC      FTQ   +L KH+         +G  
Sbjct: 634 CNVCAKTFGQLSNLKVHLRVHSGERPFKCQTCNKGFTQLA-HLQKHYL------VHTGEK 686

Query: 193 SFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAH--VLEKHEV 250
             +C +C + FS   +L+TH+ R H G  E+PYQC  C   F Q   LK H  +  +   
Sbjct: 687 PHECQVCHKRFSSTSNLKTHL-RLHSG--EKPYQCKVCPAKFTQFVHLKLHKRLHTRERP 743

Query: 251 FQCTQCEKYYRSQSTLDVHVSKKHPAG 277
            +C QC K Y    +L VH+    PAG
Sbjct: 744 HKCAQCHKSYIHLCSLKVHLKGNCPAG 770

Source: Mus musculus

Species: Mus musculus

Genus: Mus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|449486830|ref|XP_004174322.1| PREDICTED: taste receptor type 1 member 1-like [Taeniopygia guttata]

 Score = 68.6 bits (166), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 52/158 (32%), Positives = 68/158 (43%), Gaps = 12/158 (7%)

Query: 121  EMFKMDEENNKEMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMK------FTQKKKN 174
            E+FK   E    M   +  + Y+CS CSQ F++KK L  H  K           T  K  
Sbjct: 934  EVFKRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKELQSHMIKLHGAPKPHACSTCSKCF 993

Query: 175  LSKHFFKCLMKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCF 234
            LS+   +    F   G   F C  C    S    L+ HI  +H    E PY C  C   F
Sbjct: 994  LSRTELRLHEAFKHRGEKLFVCEECGHRASSRNGLQMHIKAKHRN--ERPYVCEFCHHAF 1051

Query: 235  DQGSLLKAHVLEKH---EVFQCTQCEKYYRSQSTLDVH 269
             Q + L  H L  H   + FQC  C K +R+Q++LD H
Sbjct: 1052 TQKANLNMH-LRTHTGEKPFQCHLCGKTFRTQASLDKH 1088

Source: Taeniopygia guttata

Species: Taeniopygia guttata

Genus: Taeniopygia

Family: Estrildidae

Order: Passeriformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|383864306|ref|XP_003707620.1| PREDICTED: zinc finger protein 850-like [Megachile rotundata]

 Score = 68.2 bits (165), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 79/169 (46%), Gaps = 37/169 (21%)

Query: 141 EYQCSVCSQVFIEKKNLSKHF---------FKCLMKFTQKKKNLSKHF-----------F 180
           +++C +C + F+ +  L KH          F C++     K +L +H             
Sbjct: 471 DHECEICGRAFVRRDALKKHLECLHRDVKSFLCVICNKTFKGHLPQHMRTHARDRPHGCA 530

Query: 181 KCLMKFTQ-----------SGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQ 229
            C  +F Q           SG+  F+C +C++ F+   +L+ H TRRH G  E P++C++
Sbjct: 531 TCGQRFAQKSQLTVHQRTHSGQRPFRCLVCWQAFAHSTALKLH-TRRHTG--ERPFKCAE 587

Query: 230 CSLCFDQGSLLKAH---VLEKHEVFQCTQCEKYYRSQSTLDVHVSKKHP 275
           C+  F Q    K H   +  ++E + C +C+ ++R ++ L+ H    HP
Sbjct: 588 CNAGFTQLPHWKKHMKCIHGRNEPYACKKCKSFFRIKNDLESHEKTCHP 636

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328788084|ref|XP_003251061.1| PREDICTED: hypothetical protein LOC100578529 [Apis mellifera]

 Score = 68.2 bits (165), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 98/229 (42%), Gaps = 52/229 (22%)

Query: 141 EYQCSVCSQVFIEKKNLSKHF---------FKCLMKFTQKKKNLSKHF-----------F 180
           +++C +C + F+ +  L KH          F C++     K +L +H             
Sbjct: 510 DHKCEICGRAFVRRDALKKHLECLHRDVKSFLCVICNKTFKGHLPQHMRTHARDRPHGCA 569

Query: 181 KCLMKFTQ-----------SGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQ 229
            C  +F Q           SG+  F+C +C++ F+   +L+ H TRRH G  E P++C++
Sbjct: 570 TCGQRFAQKSQLTVHQRTHSGQRPFRCLVCWQAFAHSTALKLH-TRRHTG--ERPFKCAE 626

Query: 230 CSLCFDQGSLLKAH---VLEKHEVFQCTQCEKYYRSQSTLDVHVSKKHPAGTGKVKRDIK 286
           C+  F Q    K H   +  ++E + C +C+ ++R ++ L+ H    HP    K + D+ 
Sbjct: 627 CNAGFTQLPHWKKHMKCIHGRNEPYACKKCKSFFRIKNDLECHEKTCHPE--SKTEHDVS 684

Query: 287 PNTNILTVTPNRRSARNDSTKATVKTETEVKVKIEPVADIPIKKENVVE 335
            N             R DS  A +   T V + ++      +  E + +
Sbjct: 685 NN-------------RMDSITAPIIPTTSVSMTLQSTTSSLLSNEIITD 720

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350420867|ref|XP_003492653.1| PREDICTED: zinc finger protein 408-like [Bombus impatiens]

 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 87/191 (45%), Gaps = 40/191 (20%)

Query: 141 EYQCSVCSQVFIEKKNLSKHF---------FKCLMKFTQKKKNLSKHF-----------F 180
           +++C +C + F+ +  L KH          F C++     K +L +H             
Sbjct: 562 DHKCEICGRAFVRRDALKKHLECLHRDVKSFLCVICNKTFKGHLPQHMRTHARDRPHGCA 621

Query: 181 KCLMKFTQ-----------SGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQ 229
            C  +F Q           SG+  F+C +C++ F+   +L+ H TRRH G  E P++C++
Sbjct: 622 TCGQRFAQKSQLTVHQRTHSGQRPFRCLVCWQAFAHSTALKLH-TRRHTG--ERPFKCAE 678

Query: 230 CSLCFDQGSLLKAH---VLEKHEVFQCTQCEKYYRSQSTLDVHVSKKHPAGTGKVKRDIK 286
           C+  F Q    K H   +  ++E + C +C  ++R ++ L+ H    HP    + + D+ 
Sbjct: 679 CNAGFTQLPHWKKHMKCIHGRNEPYACKKCTSFFRIKNDLECHEKTCHPE--SETEHDV- 735

Query: 287 PNTNILTVTPN 297
           PNT    +  N
Sbjct: 736 PNTQTSDLITN 746

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|338710060|ref|XP_001494044.3| PREDICTED: zinc finger protein 850 [Equus caballus]

 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 51/151 (33%), Positives = 77/151 (50%), Gaps = 24/151 (15%)

Query: 134 ERISQGLE-YQCSVCSQVFIEKKNLSKH-----------FFKCLMKFTQKKKNLSKHFFK 181
           +RI  G + Y C  C + F  K NL++H             KC   F + K+NLS+H   
Sbjct: 838 QRIHTGEKPYTCKQCGKAFSHKSNLTEHEKIHTREKPYECTKCEKAF-RHKQNLSEH--- 893

Query: 182 CLMKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLK 241
              +   +G   ++C  C + FS + SL  H+ RRH G  E+PY+C +C   F QGSLL 
Sbjct: 894 ---QKIHTGEKPYECNECGKAFSRISSLTLHL-RRHTG--EKPYECGECGKAFSQGSLLI 947

Query: 242 AHVLEK--HEVFQCTQCEKYYRSQSTLDVHV 270
            H+      + F+C +C K +  +++L VHV
Sbjct: 948 MHMRSHRGEKPFECNECGKAFSQKASLTVHV 978

Source: Equus caballus

Species: Equus caballus

Genus: Equus

Family: Equidae

Order: Perissodactyla

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|397560783|gb|AFO54706.1| PR domain containing 1 with ZNF domain [Mus musculus]

 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 92/207 (44%), Gaps = 38/207 (18%)

Query: 84  KVKREVVESPSPKREIDAPIVKRKKKDEILLMKALDEEMFKMDEENNKEMERISQGLEYQ 143
           K    V+ +PS    ++  ++K K+      M       + + ++N K        ++Y+
Sbjct: 530 KATSSVMAAPSTDGAMN--LIKNKRN-----MTGYKTLPYPLKKQNGK--------IKYE 574

Query: 144 CSVCSQVFIEKKNLSKHF--------FKCLM---KFTQKKKNLSKHFFKCLMKFTQSGRS 192
           C+VC++ F +  NL  H         FKC      FTQ   +L KH+         +G  
Sbjct: 575 CNVCAKTFGQLSNLKVHLRVHSGERPFKCQTCNKGFTQLA-HLQKHYL------VHTGEK 627

Query: 193 SFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAH--VLEKHEV 250
             +C +C + FS   +L+TH+ R H G  E+PYQC  C   F Q   LK H  +  +   
Sbjct: 628 PHECQVCHKRFSSTSNLKTHL-RLHSG--EKPYQCKVCPAKFTQFVHLKLHKRLHTRERP 684

Query: 251 FQCTQCEKYYRSQSTLDVHVSKKHPAG 277
            +C QC K Y    +L VH+    PAG
Sbjct: 685 HKCAQCHKSYIHLCSLKVHLKGNCPAG 711

Source: Mus musculus

Species: Mus musculus

Genus: Mus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	338
ZFIN|ZDB-GENE-060503-59	208	si:dkey-20i20.8 "si:dkey-20i20	0.517	0.841	0.303	8.8e-14
ZFIN|ZDB-GENE-110914-154	213	si:ch211-161m3.2 "si:ch211-161	0.568	0.901	0.263	1.5e-13
ZFIN|ZDB-GENE-060503-152	224	si:dkey-20i20.9 "si:dkey-20i20	0.508	0.767	0.283	1.9e-13
UNIPROTKB|Q1LZC0	225	ZNF22 "Zinc finger protein 22"	0.494	0.742	0.288	2.7e-12
UNIPROTKB|F1RKP8	646	ZNF568 "Uncharacterized protei	0.402	0.210	0.317	3.6e-12
UNIPROTKB|Q3ZCX4	644	ZNF568 "Zinc finger protein 56	0.372	0.195	0.32	8.9e-12
UNIPROTKB|E1BKB3	606	ZNF568 "Uncharacterized protei	0.405	0.226	0.312	1.4e-11
ZFIN|ZDB-GENE-110913-147	209	si:dkey-47k16.3 "si:dkey-47k16	0.420	0.679	0.324	1.7e-11
ZFIN|ZDB-GENE-080305-4	317	zgc:174649 "zgc:174649" [Danio	0.431	0.460	0.286	2.6e-11
FB|FBgn0031610	346	CG15436 [Drosophila melanogast	0.390	0.381	0.305	2.7e-11

ZFIN|ZDB-GENE-060503-59 si:dkey-20i20.8 "si:dkey-20i20.8" [Danio rerio (taxid:7955)]

 Score = 181 (68.8 bits), Expect = 8.8e-14, P = 8.8e-14
 Identities = 62/204 (30%), Positives = 96/204 (47%)

Query:    77 RPKGSLNKVK-REVVESPSPKREIDAPIVKRKKKDEILLMKALDEEMFKMDEENN--KEM 133
             RP G     K  E +  P P R      +K+++ +E++ +K ++ E+   DEE +  K  
Sbjct:    28 RPSGRREICKDSEKMSDPEPCR------IKQEETEELIDVK-VESEVLNEDEEKHQVKSK 80

Query:   134 ERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLS-KHFFKCLMKFTQSGRS 192
             E+I    E   SV           + + F C    TQ  K LS K  F   M+   +G  
Sbjct:    81 EKIQSETEDSISV--------NGTAVNSFTC----TQCGKTLSCKSTFIKHMRI-HTGEK 127

Query:   193 SFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHV-LEKHEV- 250
              ++C+ C + FSL ++L++H  R H G  E+PY+CS C   F    +LK HV +   E  
Sbjct:   128 PYQCSHCDKRFSLSQNLKSH-ERTHTG--EKPYKCSHCDKRFSHSGVLKTHVRIHTGEKP 184

Query:   251 FQCTQCEKYYRSQSTLDVHVSKKH 274
             + CT C K +   S+L +H    H
Sbjct:   185 YHCTDCGKSFTCSSSLRLHTKNYH 208

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-110914-154 si:ch211-161m3.2 "si:ch211-161m3.2" [Danio rerio (taxid:7955)]

 Score = 179 (68.1 bits), Expect = 1.5e-13, P = 1.5e-13
 Identities = 58/220 (26%), Positives = 100/220 (45%)

Query:    90 VESPSPKREIDAPI-VKRKKKDEILLMKALDEEMFKMDE-ENNKEMERISQGLEYQCSVC 147
             ++  S   EI+  + VK+++ +E + +K L  E   +DE E   E E+ +    + C  C
Sbjct:     4 IKEESEDVEIEETLNVKQEETEEQIDLKVLKVESKVLDEVEEKSESEQTATINNFVCPQC 63

Query:   148 SQVFIEKKNLSKHF--------FKCLM---KFTQKKKNLSKHFFKCLMKFTQSGRSSFKC 196
              + F +K+NL +H         F C     +F Q+  N+ +H    +M  T  G   + C
Sbjct:    64 GKSFAKKRNLKEHMNIHSGKKPFSCKQCGRRFAQRG-NIKRH----MMVHT--GEKPYAC 116

Query:   197 AICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLE--KHEVFQCT 254
              +C + F+   +L+ HI+  H G  E+P+ C  C   F   +  K H+    K   F+C 
Sbjct:   117 KLCEKSFTTELNLKYHISS-HTG--EKPFICGDCGKTFRYKATFKKHMASHLKQSSFECH 173

Query:   255 QCEKYYRSQSTLDVHVSK---KHPAGTGKVKRDIKPNTNI 291
             QC + +  Q +L  HV     ++P   G   +     TN+
Sbjct:   174 QCGRSFTDQESLGNHVKTHTGENPLMCGHCGKTFSNKTNL 213

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-060503-152 si:dkey-20i20.9 "si:dkey-20i20.9" [Danio rerio (taxid:7955)]

 Score = 178 (67.7 bits), Expect = 1.9e-13, P = 1.9e-13
 Identities = 55/194 (28%), Positives = 91/194 (46%)

Query:    86 KREVVESPSPKREIDAPIVKRKKKDEILLMKALDEEMFKMDEENNKEMERISQG-LEYQC 144
             +RE+ +      + +   +K+++ +EI+ +K   EE+ + +E++  + E  +Q   E   
Sbjct:    48 RREICKDGEKMSDPEPCRIKQEETEEIIDVKEESEELNEDEEKHQVKSEEETQSETEQSM 107

Query:   145 SVCSQVFIEKKNLSKHFFKCLM--KFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAICFEY 202
             SV        K  + +   C    K    K NL KH     M+   +G   ++C+ C + 
Sbjct:   108 SV--------KGTAVNSLTCTQCGKTLSCKSNLKKH-----MRI-HTGEKPYQCSHCDKR 153

Query:   203 FSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHV-LEKHEV-FQCTQCEKYY 260
             FS L++L+ H  R H G  E+PY+CS C   F    +LK H+ +   E  + CT C K Y
Sbjct:   154 FSFLQNLKAH-ERTHTG--EKPYKCSHCDKRFGHSEVLKTHMRIHTGEKPYHCTDCGKSY 210

Query:   261 RSQSTLDVHVSKKH 274
                S L  H  K H
Sbjct:   211 TCLSALRQHTKKYH 224

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|Q1LZC0 ZNF22 "Zinc finger protein 22" [Bos taurus (taxid:9913)]

 Score = 168 (64.2 bits), Expect = 2.7e-12, P = 2.7e-12
 Identities = 54/187 (28%), Positives = 85/187 (45%)

Query:   130 NKEMERISQGLE---YQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKC--LM 184
             +  + R+ +GL+   Y+C  C + F +   L +H      K + K  +  K FF+   L+
Sbjct:    40 DSSLRRLRRGLDEKPYKCVECEKSFSQSSTLFQHQKIHTGKKSHKCADCGKSFFQSSNLI 99

Query:   185 KFTQ--SGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLL-- 240
             +  +  +G   ++C  C E F    +L  H  R H G  E+PYQC +C  CF Q S L  
Sbjct:   100 QHRRVHTGEKPYRCDECGERFKQSSNLIQH-QRIHTG--EKPYQCDECGRCFSQSSHLIQ 156

Query:   241 --KAHVLEKHEVFQCTQCEKYYRSQSTLDVHVSKKHPAGTGKVK-RDIKPNTNILT---V 294
               + H  EK   +QC++C K +   S L  H          K + R ++  T+ L+    
Sbjct:   157 HQRTHTGEKP--YQCSECGKCFSQSSHLRQHTKVHEEEKPRKTRGRSLRAKTHSLSSWKA 214

Query:   295 TPNRRSA 301
                RRSA
Sbjct:   215 GKGRRSA 221

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1RKP8 ZNF568 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 189 (71.6 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
 Identities = 52/164 (31%), Positives = 85/164 (51%)

Query:   134 ERISQGLE-YQCSVCSQVFIEKKNLSKHF--------FKCLM--KFTQKKKNLSKHFFKC 182
             +RI  G + Y C+VC + F +K NL++H         + C    K   +++NL +H    
Sbjct:   495 QRIHTGEKPYACTVCGKAFSQKSNLTEHEKIHTGEKPYHCNQCGKAFSQRQNLLEH---- 550

Query:   183 LMKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKA 242
               +   +G   FKC  C + FS + SL  H+ R H G  E+PY+C++C   F Q SLL  
Sbjct:   551 --EKIHTGEKPFKCNECGKAFSRISSLTLHV-RSHTG--EKPYECNKCGKAFSQCSLLII 605

Query:   243 HVLEKH---EVFQCTQCEKYYRSQSTLDVHVSKKHPAGTGKVKR 283
             H +  H   + F+C +C K +  +++L +H  + H   TG+ +R
Sbjct:   606 H-MRSHTGEKPFECNECGKAFSQRASLSIH-KRGH---TGEKRR 644

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|Q3ZCX4 ZNF568 "Zinc finger protein 568" [Homo sapiens (taxid:9606)]

 Score = 186 (70.5 bits), Expect = 8.9e-12, P = 8.9e-12
 Identities = 48/150 (32%), Positives = 78/150 (52%)

Query:   134 ERISQGLE-YQCSVCSQVFIEKKNLSKHF--------FKCLM--KFTQKKKNLSKHFFKC 182
             +RI  G + Y C+VC + F +K NL++H         + C    K   +++NL +H    
Sbjct:   493 QRIHTGEKPYACTVCGKAFSQKSNLTEHEKIHTGEKPYHCNQCGKAFSQRQNLLEH---- 548

Query:   183 LMKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKA 242
               +   +G   FKC  C + FS + SL  H+ R H G  E+PY+C++C   F Q SLL  
Sbjct:   549 --EKIHTGEKPFKCNECGKAFSRISSLTLHV-RSHTG--EKPYECNKCGKAFSQCSLLII 603

Query:   243 HVLEKH---EVFQCTQCEKYYRSQSTLDVH 269
             H +  H   + F+C +C K +  +++L +H
Sbjct:   604 H-MRSHTGEKPFECNECGKAFSQRASLSIH 632

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|E1BKB3 ZNF568 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 184 (69.8 bits), Expect = 1.4e-11, P = 1.4e-11
 Identities = 51/163 (31%), Positives = 85/163 (52%)

Query:   134 ERISQGLE-YQCSVCSQVFIEKKNLSKHF--------FKCLM--KFTQKKKNLSKHFFKC 182
             +RI  G + Y C+VC + F +K NL++H         + C    K   +++NL +H    
Sbjct:   455 QRIHTGEKPYACTVCGKAFSQKSNLTEHEKIHTGEKPYHCNQCGKAFSQRQNLLEH---- 510

Query:   183 LMKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKA 242
               +   +G   FKC  C + FS + SL  H+ R H G  E+PY+C++C   F Q SLL  
Sbjct:   511 --EKIHTGEKPFKCNECGKAFSRISSLTLHV-RSHTG--EKPYECNKCGKAFSQCSLLII 565

Query:   243 HV-LEKHEV-FQCTQCEKYYRSQSTLDVHVSKKHPAGTGKVKR 283
             H+ +   E  ++C +C K +  +++L +H  + H   TG+ +R
Sbjct:   566 HMRIHTGEKPYECNECGKAFSQRASLSIH-KRGH---TGEKRR 604

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-110913-147 si:dkey-47k16.3 "si:dkey-47k16.3" [Danio rerio (taxid:7955)]

 Score = 161 (61.7 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 51/157 (32%), Positives = 69/157 (43%)

Query:   123 FKMDEENNKEMERISQGLE-YQCSVCSQVFIEKKNLSKHFF----KCLMKFTQ--KKKNL 175
             F      N+ M RI  G + + C+ C   FI   +L+ H      +     TQ  K  N 
Sbjct:    47 FNQSSNLNRHM-RIHTGEKPFTCTQCGTSFIRSSSLNLHIMSHNGEKPFTCTQCGKSFNR 105

Query:   176 SKHFFKCLMKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFD 235
             S H  + +M  T  G   F C  C   FS   +L  H+ R H G  E+P+ C QC + F 
Sbjct:   106 SSHLNRHMMIHT--GEKPFTCTQCGMSFSQSSNLNLHM-RIHTG--EKPFACPQCGMSFS 160

Query:   236 QGSLLKAH--VLEKHEVFQCTQCEKYYRSQSTLDVHV 270
             Q S L  H  V    + F C QC K + S S L+ H+
Sbjct:   161 QSSNLNLHMRVHTGEKPFTCPQCGKSFNSSSHLNRHM 197

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-080305-4 zgc:174649 "zgc:174649" [Danio rerio (taxid:7955)]

 Score = 176 (67.0 bits), Expect = 2.6e-11, P = 2.6e-11
 Identities = 49/171 (28%), Positives = 84/171 (49%)

Query:   119 DEEMFKMDEENNKEMERISQ---GLEYQCSVCSQVFIEKKNLSKHF--------FKCLM- 166
             +E   K++++ + + + I +   G  + C+ C ++   K  L  H         F C   
Sbjct:    40 EEHHVKIEDKTHLQTDGILKRRDGNRFTCTQCGKILGSKSKLKIHMSIHTGEKPFTCTQC 99

Query:   167 -KFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPY 225
              K   K  +L++H     M+   +G   F C +C + FSL  SL  H+ R H G  E+P+
Sbjct:   100 GKSFSKSSSLNQH-----MRI-HTGEKPFTCTLCGKSFSLSSSLNLHM-RIHTG--EKPF 150

Query:   226 QCSQCSLCFDQGSLLKAHVL--EKHEVFQCTQCEKYYRSQSTLDVHVSKKH 274
              C++C   F+  S L  H++     + F CTQCEK +R  S+L++H+ + H
Sbjct:   151 TCTRCGKSFNCSSNLSKHMMIHTGEKPFTCTQCEKSFRISSSLNLHM-RSH 200

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008150 "biological_process" evidence=ND

FB|FBgn0031610 CG15436 [Drosophila melanogaster (taxid:7227)]

 Score = 177 (67.4 bits), Expect = 2.7e-11, P = 2.7e-11
 Identities = 47/154 (30%), Positives = 74/154 (48%)

Query:   134 ERISQGLE-YQCSVCSQVFIEKKNLSKHF--------FKC--LMKFTQKKKNLSKHFFKC 182
             ER   G   ++CS CS+ FI+  +L +H         FKC    K   +K +L  HF   
Sbjct:   201 ERTHTGERPFKCSQCSKTFIKSSDLRRHIRTHGSERPFKCSKCTKTFTRKFHLDNHFR-- 258

Query:   183 LMKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKA 242
                 + +G   FKC+ C + F++ + L+ H +R H+   + P++CS C   F   S LK 
Sbjct:   259 ----SHTGERPFKCSHCPKAFAMKQHLKQH-SRLHLP--DRPFRCSHCPKTFRLSSTLKE 311

Query:   243 HVL--EKHEVFQCTQCEKYYRSQSTLDVHVSKKH 274
             H L       F+C  C  +Y+ + TL  H+ + H
Sbjct:   312 HKLVHNAERTFKCPHCASFYKQRKTLARHILEIH 345

GO:0005634 "nucleus" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	338
KOG2462|consensus	279		99.94
KOG1074|consensus	958		99.93
KOG2462|consensus	279		99.93
KOG3608|consensus	467		99.87
KOG3608|consensus	467		99.8
KOG3623|consensus	1007		99.79
KOG1074|consensus	958		99.73
KOG3576|consensus	267		99.68
KOG3576|consensus	267		99.68
KOG3623|consensus	1007		99.57
PLN03086	567	PRLI-interacting factor K; Provisional	99.28
PLN03086	567	PRLI-interacting factor K; Provisional	99.23
PHA00733	128	hypothetical protein	99.13
KOG3993|consensus	500		99.09
PHA00733	128	hypothetical protein	99.05
PHA02768	55	hypothetical protein; Provisional	98.78
PHA02768	55	hypothetical protein; Provisional	98.78
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.49
KOG3993|consensus	500		98.48
PHA00732	79	hypothetical protein	98.38
PHA00732	79	hypothetical protein	98.34
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.3
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.25
PHA00616	44	hypothetical protein	98.2
PHA00616	44	hypothetical protein	98.0
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.0
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.91
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.75
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.7
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.66
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.53
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.4
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.28
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.22
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.14
KOG1146|consensus	1406		97.12
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.0
COG5236	493	Uncharacterized conserved protein, contains RING Z	96.78
COG5236	493	Uncharacterized conserved protein, contains RING Z	96.65
KOG2231|consensus	669		96.61
KOG2482|consensus	423		96.6
smart00355	26	ZnF_C2H2 zinc finger.	96.44
KOG1146|consensus	1406		96.32
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.31
KOG4173|consensus	253		96.2
KOG2231|consensus	669		96.15
smart00355	26	ZnF_C2H2 zinc finger.	96.06
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	95.9
PRK04860	160	hypothetical protein; Provisional	95.82
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	95.67
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	95.66
KOG2785|consensus	390		95.6
PRK04860	160	hypothetical protein; Provisional	95.46
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	95.37
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	95.27
KOG4173|consensus	253		95.2
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.19
COG5048	467	FOG: Zn-finger [General function prediction only]	94.89
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	94.5
COG5048	467	FOG: Zn-finger [General function prediction only]	94.39
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	94.27
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	94.23
KOG2482|consensus	423		94.19
KOG2893|consensus	341		94.15
KOG2785|consensus	390		94.01
KOG2893|consensus	341		93.12
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	92.81
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	92.49
COG4049	65	Uncharacterized protein containing archaeal-type C	92.03
KOG4167|consensus	907		91.87
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	91.7
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	90.72
COG4049	65	Uncharacterized protein containing archaeal-type C	90.03
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	88.56
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	88.38
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	87.15
COG5151	421	SSL1 RNA polymerase II transcription initiation/nu	86.03
KOG2186|consensus	276		85.18
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	84.98
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	84.86
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	84.61
KOG2272|consensus	332		84.57
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	84.19
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	83.85
smart00531	147	TFIIE Transcription initiation factor IIE.	83.82
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	83.18
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	82.87
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	82.43
KOG2186|consensus	276		81.2
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	81.1

>KOG2462|consensus

Probab=99.94  E-value=3.6e-28  Score=203.43  Aligned_cols=137  Identities=25%  Similarity=0.490  Sum_probs=125.0

Q ss_pred             CCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceeccccccccCChHHHHHHHhhhc
Q psy7466         138 QGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAICFEYFSLLESLETHITRRH  217 (338)
Q Consensus       138 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H  217 (338)
                      ....|+|+.||+.+.+.++|-+|.++|                     +.-...+.+.|.+||+.|.+..+|.+|+ +.|
T Consensus       127 ~~~r~~c~eCgk~ysT~snLsrHkQ~H---------------------~~~~s~ka~~C~~C~K~YvSmpALkMHi-rTH  184 (279)
T KOG2462|consen  127 KHPRYKCPECGKSYSTSSNLSRHKQTH---------------------RSLDSKKAFSCKYCGKVYVSMPALKMHI-RTH  184 (279)
T ss_pred             cCCceeccccccccccccccchhhccc---------------------ccccccccccCCCCCceeeehHHHhhHh-hcc
Confidence            344689999999999999999998665                     2223457799999999999999999999 999


Q ss_pred             cCCCCCceecCcCcccccChhHHHHHHHc--CCCceecccccccccChhhHHHHhhccCCCCCCccccCCCCCCCCCCCC
Q psy7466         218 IGICEEPYQCSQCSLCFDQGSLLKAHVLE--KHEVFQCTQCEKYYRSQSTLDVHVSKKHPAGTGKVKRDIKPNTNILTVT  295 (338)
Q Consensus       218 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~--~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~C~~C~~~f~~~~~  295 (338)
                      .-    +++|.+||+.|...+.|+.|+++  |+|||.|+.|++.|..+++|+.| +.+| .+.++|+|..|+++|.....
T Consensus       185 ~l----~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAH-mQTH-S~~K~~qC~~C~KsFsl~Sy  258 (279)
T KOG2462|consen  185 TL----PCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAH-MQTH-SDVKKHQCPRCGKSFALKSY  258 (279)
T ss_pred             CC----CcccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHH-HHhh-cCCccccCcchhhHHHHHHH
Confidence            64    89999999999999999999998  99999999999999999999999 8999 99999999999999999999


Q ss_pred             ccccccc
Q psy7466         296 PNRRSAR  302 (338)
Q Consensus       296 l~~H~~~  302 (338)
                      |.+|...
T Consensus       259 LnKH~ES  265 (279)
T KOG2462|consen  259 LNKHSES  265 (279)
T ss_pred             HHHhhhh
Confidence            9999764

>KOG1074|consensus

Probab=99.93  E-value=5.7e-27  Score=220.69  Aligned_cols=61  Identities=13%  Similarity=0.218  Sum_probs=56.4

Q ss_pred             ceecccccccccChhhHHHHhhccCCCCCCccccCCCCCCCCCCCCcccccccCCCCCCCccc
Q psy7466         250 VFQCTQCEKYYRSQSTLDVHVSKKHPAGTGKVKRDIKPNTNILTVTPNRRSARNDSTKATVKT  312 (338)
Q Consensus       250 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~  312 (338)
                      ...|..||+.|...++|..| ++.| +++++|.|.+|++.|.++..|+.|+.+|+....+...
T Consensus       879 ~h~C~vCgk~FsSSsALqiH-~rTH-tg~KPF~C~fC~~aFttrgnLKvHMgtH~w~q~~srr  939 (958)
T KOG1074|consen  879 AHVCNVCGKQFSSSAALEIH-MRTH-TGPKPFFCHFCEEAFTTRGNLKVHMGTHMWVQPPSRR  939 (958)
T ss_pred             hhhhccchhcccchHHHHHh-hhcC-CCCCCccchhhhhhhhhhhhhhhhhccccccCCCccC
Confidence            37899999999999999999 9999 9999999999999999999999999988877766555

>KOG2462|consensus

Probab=99.93  E-value=1.9e-26  Score=193.18  Aligned_cols=134  Identities=25%  Similarity=0.467  Sum_probs=124.3

Q ss_pred             ccccccccchhhHhhhcChHHHHHHHHHhcC---CCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhc
Q psy7466         108 KKDEILLMKALDEEMFKMDEENNKEMERISQ---GLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLM  184 (338)
Q Consensus       108 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~  184 (338)
                      ......|.|..|++.+.+...|.+|..+|..   .+.|.|.+|++.|.+...|..|++                      
T Consensus       125 ~~~~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHir----------------------  182 (279)
T KOG2462|consen  125 AAKHPRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIR----------------------  182 (279)
T ss_pred             cccCCceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhh----------------------
Confidence            4456779999999999999999999999965   567999999999999999999984                      


Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcCcccccChhHHHHHHHc--CCCceecccccccccC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLE--KHEVFQCTQCEKYYRS  262 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~--~~~~~~C~~C~k~f~~  262 (338)
                        +|+  .++.|.+||+.|...+.|+-|+ +.|+|  ||||.|+.|+++|..+++|+.||++  +.++|+|..|+|+|..
T Consensus       183 --TH~--l~c~C~iCGKaFSRPWLLQGHi-RTHTG--EKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl  255 (279)
T KOG2462|consen  183 --THT--LPCECGICGKAFSRPWLLQGHI-RTHTG--EKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFAL  255 (279)
T ss_pred             --ccC--CCcccccccccccchHHhhccc-ccccC--CCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHH
Confidence              444  5799999999999999999999 99999  9999999999999999999999999  7889999999999999


Q ss_pred             hhhHHHHh
Q psy7466         263 QSTLDVHV  270 (338)
Q Consensus       263 ~~~L~~H~  270 (338)
                      .+.|.+|.
T Consensus       256 ~SyLnKH~  263 (279)
T KOG2462|consen  256 KSYLNKHS  263 (279)
T ss_pred             HHHHHHhh
Confidence            99999994

>KOG3608|consensus

Probab=99.87  E-value=1.9e-22  Score=173.35  Aligned_cols=186  Identities=20%  Similarity=0.318  Sum_probs=158.7

Q ss_pred             cccc--hhhHhhhcChHHHHHHHHHhcCCCccccccccccccChhhHHHHHHHh-------------hhhhhhhhhchhh
Q psy7466         113 LLMK--ALDEEMFKMDEENNKEMERISQGLEYQCSVCSQVFIEKKNLSKHFFKC-------------LMKFTQKKKNLSK  177 (338)
Q Consensus       113 ~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h-------------~~~f~~~~~~l~~  177 (338)
                      .+.|  ..|-..|.++..|++|++.|++++...|+.||.-|.++..|..|++..             .+.|... ..|..
T Consensus       177 v~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTe-klL~~  255 (467)
T KOG3608|consen  177 VTMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATE-KLLKS  255 (467)
T ss_pred             eeeccchhhhhhhccHHHHHHHHHhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHH-HHHHH
Confidence            3445  469999999999999999999999999999999999999999998543             3444444 55666


Q ss_pred             hhhhhhcccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcCcccccChhHHHHHHHcC-CCceeccc-
Q psy7466         178 HFFKCLMKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLEK-HEVFQCTQ-  255 (338)
Q Consensus       178 h~~~c~~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~-~~~~~C~~-  255 (338)
                      |+      ..|.  .-|+|+.|+.+....++|..|++..|..  ++||+|..|++.|.+..+|.+|+.++ ...|.|.. 
T Consensus       256 Hv------~rHv--n~ykCplCdmtc~~~ssL~~H~r~rHs~--dkpfKCd~Cd~~c~~esdL~kH~~~HS~~~y~C~h~  325 (467)
T KOG3608|consen  256 HV------VRHV--NCYKCPLCDMTCSSASSLTTHIRYRHSK--DKPFKCDECDTRCVRESDLAKHVQVHSKTVYQCEHP  325 (467)
T ss_pred             HH------HHhh--hcccccccccCCCChHHHHHHHHhhhcc--CCCccccchhhhhccHHHHHHHHHhccccceecCCC
Confidence            65      4443  4599999999999999999999889998  99999999999999999999999985 45699998 


Q ss_pred             -ccccccChhhHHHHhhccC-CCCCCccccCCCCCCCCCCCCcccccccCCCCCCC
Q psy7466         256 -CEKYYRSQSTLDVHVSKKH-PAGTGKVKRDIKPNTNILTVTPNRRSARNDSTKAT  309 (338)
Q Consensus       256 -C~k~f~~~~~L~~H~~~~H-~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  309 (338)
                       |.++|++...|.+|++..| +..+.+|.|..|++.|.+..+|..|+.+.|+-.-+
T Consensus       326 ~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~kkH~f~~P  381 (467)
T KOG3608|consen  326 DCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFTSGKSLSAHLMKKHGFRLP  381 (467)
T ss_pred             CCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhccchhHHHHHHHhhcccCC
Confidence             9999999999999988888 34456799999999999999999999988876543

>KOG3608|consensus

Probab=99.80  E-value=2e-20  Score=160.94  Aligned_cols=188  Identities=21%  Similarity=0.295  Sum_probs=137.3

Q ss_pred             ccccccc--hhhHhhhcChHHHHHHHHHhcC------------C-Ccccccc--ccccccChhhHHHHHHHh--------
Q psy7466         110 DEILLMK--ALDEEMFKMDEENNKEMERISQ------------G-LEYQCSV--CSQVFIEKKNLSKHFFKC--------  164 (338)
Q Consensus       110 ~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~------------~-~~~~C~~--C~~~f~~~~~L~~H~~~h--------  164 (338)
                      ....|.|  ..|+..|.+...|..|...|.-            + ..+.|..  |.+.|.+++.|+.|.++|        
T Consensus       131 ~g~~f~C~WedCe~~F~s~~ef~dHV~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvAC  210 (467)
T KOG3608|consen  131 LGQNFRCGWEDCEREFVSIVEFQDHVVKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHIRTHSNEKVVAC  210 (467)
T ss_pred             chhhhccChhhcCCcccCHHHHHHHHHHhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHHHhcCCCeEEec
Confidence            3445566  5699999999999999887742            1 1366766  999999999999999776        


Q ss_pred             ---hhhhhhhhhchhhhhhhhhcccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcCcccccChhHHH
Q psy7466         165 ---LMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLK  241 (338)
Q Consensus       165 ---~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~~~f~~~~~l~  241 (338)
                         +..|..+ ..|-.|+.    ..+-....+|.|..|.+.|.+...|..|+ +.|..    -|+|+.|+.+....++|.
T Consensus       211 p~Cg~~F~~~-tkl~DH~r----Rqt~l~~n~fqC~~C~KrFaTeklL~~Hv-~rHvn----~ykCplCdmtc~~~ssL~  280 (467)
T KOG3608|consen  211 PHCGELFRTK-TKLFDHLR----RQTELNTNSFQCAQCFKRFATEKLLKSHV-VRHVN----CYKCPLCDMTCSSASSLT  280 (467)
T ss_pred             chHHHHhccc-cHHHHHHH----hhhhhcCCchHHHHHHHHHhHHHHHHHHH-HHhhh----cccccccccCCCChHHHH
Confidence               3344444 56666651    12233445788888888888888888887 77754    678888888888888888


Q ss_pred             HHHHc---CCCceecccccccccChhhHHHHhhccCCCCCCccccCC--CCCCCCCCCCcccccccCCCCCCCc
Q psy7466         242 AHVLE---KHEVFQCTQCEKYYRSQSTLDVHVSKKHPAGTGKVKRDI--KPNTNILTVTPNRRSARNDSTKATV  310 (338)
Q Consensus       242 ~H~~~---~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~  310 (338)
                      .|++.   ..+||+|+.|++.|.+.+.|.+| ...| . +..|.|..  |.++|.+...|++|.+.+|.++.+.
T Consensus       281 ~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH-~~~H-S-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~  351 (467)
T KOG3608|consen  281 THIRYRHSKDKPFKCDECDTRCVRESDLAKH-VQVH-S-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPI  351 (467)
T ss_pred             HHHHhhhccCCCccccchhhhhccHHHHHHH-HHhc-c-ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCC
Confidence            88776   45778888888888888888888 4477 4 56678877  8888888888888887777555443

>KOG3623|consensus

Probab=99.79  E-value=3.4e-20  Score=172.55  Aligned_cols=123  Identities=21%  Similarity=0.369  Sum_probs=99.2

Q ss_pred             ccccccchhhHhhhcChHHHHHHHHHhc--CCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccc
Q psy7466         110 DEILLMKALDEEMFKMDEENNKEMERIS--QGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFT  187 (338)
Q Consensus       110 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~  187 (338)
                      -...+.|++|.+.+.....|..|++.-+  .+..|.|..|..+|.....|.+||.+|...-...     .++      ..
T Consensus       207 fsqlltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa-----~sl------tq  275 (1007)
T KOG3623|consen  207 FSQLLTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQA-----ISL------TQ  275 (1007)
T ss_pred             hhhhhcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCccc-----ccc------cc
Confidence            3456789999999999999999976533  3456999999999999999999998882222111     000      11


Q ss_pred             cCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcCcccccChhHHHHHHHc
Q psy7466         188 QSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLE  246 (338)
Q Consensus       188 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~  246 (338)
                      ..+.+.|+|..||+.|..+..|+.|+ +.|.|  ++||.|+.|+++|.....+..||..
T Consensus       276 sa~lRKFKCtECgKAFKfKHHLKEHl-RIHSG--EKPfeCpnCkKRFSHSGSySSHmSS  331 (1007)
T KOG3623|consen  276 SALLRKFKCTECGKAFKFKHHLKEHL-RIHSG--EKPFECPNCKKRFSHSGSYSSHMSS  331 (1007)
T ss_pred             hhhhccccccccchhhhhHHHHHhhh-eeecC--CCCcCCcccccccccCCcccccccc
Confidence            23456799999999999999999999 99999  9999999999999999999999743

>KOG1074|consensus

Probab=99.73  E-value=1.2e-18  Score=164.98  Aligned_cols=159  Identities=22%  Similarity=0.372  Sum_probs=124.6

Q ss_pred             cccccccccchhhHhhhcChHHHHHHHHHhcCCCccccccccccccChhhHHHHHHHhh------------------hhh
Q psy7466         107 KKKDEILLMKALDEEMFKMDEENNKEMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCL------------------MKF  168 (338)
Q Consensus       107 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~------------------~~f  168 (338)
                      ..+...+.+|-+|-++....+.|+.|+++|+|++||+|.+||+.|.++.+|+.||-+|.                  ..|
T Consensus       599 ~~~~TdPNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kf  678 (958)
T KOG1074|consen  599 ENKRTDPNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKF  678 (958)
T ss_pred             ccccCCccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhcccc
Confidence            34456778999999999999999999999999999999999999999999999997771                  112


Q ss_pred             hhhhhchhhhhhhhhcccccCCC-------------cceeccccccccCChHHHHHHHhhhccCCCCCc-----------
Q psy7466         169 TQKKKNLSKHFFKCLMKFTQSGR-------------SSFKCAICFEYFSLLESLETHITRRHIGICEEP-----------  224 (338)
Q Consensus       169 ~~~~~~l~~h~~~c~~~~~h~~~-------------~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~-----------  224 (338)
                      ... ..|..|+      +.|.+.             -.-+|..|.+.|.....+..++ ..|.+....+           
T Consensus       679 tn~-V~lpQhI------riH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~-se~~~~~s~~~~~~~~~t~t~  750 (958)
T KOG1074|consen  679 TNA-VTLPQHI------RIHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQI-SEQPSPESEPDEQMDERTETE  750 (958)
T ss_pred             ccc-ccccceE------EeecCCCCCCCcccccccchhcccchhhhcccccccchhhh-hccCCcccCCccccccccccc
Confidence            211 2333333      555521             1246888888887777777776 5552110000           


Q ss_pred             --------------------------------------------------------------------------------
Q psy7466         225 --------------------------------------------------------------------------------  224 (338)
Q Consensus       225 --------------------------------------------------------------------------------  224 (338)
                                                                                                      
T Consensus       751 ~~~~tp~~~e~~~~~~~~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~~~~T~~k~~~~~~~~~~~~~~~v~~~pvl~  830 (958)
T KOG1074|consen  751 ELDVTPPPPENSCGRELEGEMAISVRGSTEEASANLDEVGTVSAAGEAGEEDDTSEKPTQASSFPGEILAPSVNMDPVLW  830 (958)
T ss_pred             ccccCCCccccccccccCcccccccccchhhhhcChhhhcCccccchhhhhcccCCCCcccccCCCcCCccccccCchhh
Confidence                                                                                            


Q ss_pred             -------------------------------------------------eecCcCcccccChhHHHHHHHc--CCCceec
Q psy7466         225 -------------------------------------------------YQCSQCSLCFDQGSLLKAHVLE--KHEVFQC  253 (338)
Q Consensus       225 -------------------------------------------------~~C~~C~~~f~~~~~l~~H~~~--~~~~~~C  253 (338)
                                                                       +.|..|++.|.+...|..|+++  +.|||.|
T Consensus       831 ~~~~~~l~eg~~t~~n~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH~rTHtg~KPF~C  910 (958)
T KOG1074|consen  831 NQETSMLNEGLATKTNEITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIHMRTHTGPKPFFC  910 (958)
T ss_pred             cccccccccccccccccccCCCcchhhhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHhhhcCCCCCCccc
Confidence                                                             6799999999999999999999  7899999


Q ss_pred             ccccccccChhhHHHHhhccC
Q psy7466         254 TQCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       254 ~~C~k~f~~~~~L~~H~~~~H  274 (338)
                      .+|++.|..+.+|+.| +..|
T Consensus       911 ~fC~~aFttrgnLKvH-MgtH  930 (958)
T KOG1074|consen  911 HFCEEAFTTRGNLKVH-MGTH  930 (958)
T ss_pred             hhhhhhhhhhhhhhhh-hccc
Confidence            9999999999999999 6688

>KOG3576|consensus

Probab=99.68  E-value=1.6e-17  Score=132.83  Aligned_cols=125  Identities=21%  Similarity=0.391  Sum_probs=97.8

Q ss_pred             ccccccccchhhHhhhcChHHHHHHHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccc
Q psy7466         108 KKDEILLMKALDEEMFKMDEENNKEMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFT  187 (338)
Q Consensus       108 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~  187 (338)
                      -.+...|.|.+|++.|.-...|.+||+-|...+.|-|..||+.|..-..|.+|+                        ++
T Consensus       112 ssd~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~------------------------rt  167 (267)
T KOG3576|consen  112 SSDQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHT------------------------RT  167 (267)
T ss_pred             CCCCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhh------------------------cc
Confidence            345778999999999999999999999999999999999999999999999998                        88


Q ss_pred             cCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcCcccccChhHHHHHHHcCCCceecccccccccChhhHH
Q psy7466         188 QSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLEKHEVFQCTQCEKYYRSQSTLD  267 (338)
Q Consensus       188 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~C~~C~k~f~~~~~L~  267 (338)
                      |+|.+||+|..|++.|...-+|..|++..|..  ...|             .++   ....+.|.|..||++-.....+.
T Consensus       168 htgvrpykc~~c~kaftqrcsleshl~kvhgv--~~~y-------------ayk---err~kl~vcedcg~t~~~~e~~~  229 (267)
T KOG3576|consen  168 HTGVRPYKCSLCEKAFTQRCSLESHLKKVHGV--QHQY-------------AYK---ERRAKLYVCEDCGYTSERPEVYY  229 (267)
T ss_pred             ccCccccchhhhhHHHHhhccHHHHHHHHcCc--hHHH-------------HHH---HhhhheeeecccCCCCCChhHHH
Confidence            99999999999999999999999999888854  1111             000   11244566666666665556666


Q ss_pred             HHhhccC
Q psy7466         268 VHVSKKH  274 (338)
Q Consensus       268 ~H~~~~H  274 (338)
                      .|+...|
T Consensus       230 ~h~~~~h  236 (267)
T KOG3576|consen  230 LHLKLHH  236 (267)
T ss_pred             HHHHhcC
Confidence            6644444

>KOG3576|consensus

Probab=99.68  E-value=6.7e-18  Score=134.90  Aligned_cols=119  Identities=21%  Similarity=0.319  Sum_probs=108.4

Q ss_pred             cCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcCcccccChhHHHHHHHc--CCCceecccccccccChhh
Q psy7466         188 QSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLE--KHEVFQCTQCEKYYRSQST  265 (338)
Q Consensus       188 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~--~~~~~~C~~C~k~f~~~~~  265 (338)
                      ..+...|.|.+|++.|.....|.+|+ .-|..  .+.|-|..||+.|....+|++|+++  +.+||+|..|++.|+.+-+
T Consensus       112 ssd~d~ftCrvCgK~F~lQRmlnrh~-kch~~--vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcs  188 (267)
T KOG3576|consen  112 SSDQDSFTCRVCGKKFGLQRMLNRHL-KCHSD--VKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCS  188 (267)
T ss_pred             CCCCCeeeeehhhhhhhHHHHHHHHh-hhccH--HHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhcc
Confidence            34566799999999999999999999 89988  7999999999999999999999998  7899999999999999999


Q ss_pred             HHHHhhccCC---------CCCCccccCCCCCCCCCCCCcccccccCCCCCCC
Q psy7466         266 LDVHVSKKHP---------AGTGKVKRDIKPNTNILTVTPNRRSARNDSTKAT  309 (338)
Q Consensus       266 L~~H~~~~H~---------~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  309 (338)
                      |..|++++|.         ...+-|.|..||++-.....+..|++.+|.....
T Consensus       189 leshl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~Spa  241 (267)
T KOG3576|consen  189 LESHLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFSPA  241 (267)
T ss_pred             HHHHHHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCCCHH
Confidence            9999999994         1346799999999999999999999999887654

>KOG3623|consensus

Probab=99.57  E-value=1.1e-15  Score=142.78  Aligned_cols=108  Identities=23%  Similarity=0.401  Sum_probs=98.6

Q ss_pred             eeccccccccCChHHHHHHHhhhccCCCCCceecCcCcccccChhHHHHHHHcCC---------------Cceecccccc
Q psy7466         194 FKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLEKH---------------EVFQCTQCEK  258 (338)
Q Consensus       194 ~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~---------------~~~~C~~C~k  258 (338)
                      ..|++|.+.+.....|+.|++..|... +..|.|..|.++|.++..|.+||.++.               +.|+|..|||
T Consensus       211 ltcpycdrgykrltslkeHikyrhekn-e~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgK  289 (1007)
T KOG3623|consen  211 LTCPYCDRGYKRLTSLKEHIKYRHEKN-EPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGK  289 (1007)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHhhC-CCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccch
Confidence            689999999999999999997778654 567999999999999999999997732               4799999999


Q ss_pred             cccChhhHHHHhhccCCCCCCccccCCCCCCCCCCCCcccccccCC
Q psy7466         259 YYRSQSTLDVHVSKKHPAGTGKVKRDIKPNTNILTVTPNRRSARND  304 (338)
Q Consensus       259 ~f~~~~~L~~H~~~~H~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  304 (338)
                      .|..+..|+.| .++| .|++||.|+.|++.|....++..|+...-
T Consensus       290 AFKfKHHLKEH-lRIH-SGEKPfeCpnCkKRFSHSGSySSHmSSKK  333 (1007)
T KOG3623|consen  290 AFKFKHHLKEH-LRIH-SGEKPFECPNCKKRFSHSGSYSSHMSSKK  333 (1007)
T ss_pred             hhhhHHHHHhh-heee-cCCCCcCCcccccccccCCcccccccccc
Confidence            99999999999 8999 99999999999999999999999986553

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.28  E-value=3.6e-12  Score=120.23  Aligned_cols=146  Identities=15%  Similarity=0.259  Sum_probs=107.0

Q ss_pred             ccccchhhHhhhcChHHHHHHHHHhcCCCcccccc--ccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccC
Q psy7466         112 ILLMKALDEEMFKMDEENNKEMERISQGLEYQCSV--CSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQS  189 (338)
Q Consensus       112 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~  189 (338)
                      ....|+.|..... ...|..|...... ..-.|+.  |+..|. +..|..|                             
T Consensus       406 ~~V~C~NC~~~i~-l~~l~lHe~~C~r-~~V~Cp~~~Cg~v~~-r~el~~H-----------------------------  453 (567)
T PLN03086        406 DTVECRNCKHYIP-SRSIALHEAYCSR-HNVVCPHDGCGIVLR-VEEAKNH-----------------------------  453 (567)
T ss_pred             CeEECCCCCCccc-hhHHHHHHhhCCC-cceeCCcccccceee-ccccccC-----------------------------
Confidence            3446888887764 3456677655433 2346774  888773 3334444                             


Q ss_pred             CCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcCcccccChhHHHHHHHc--CCCceecccccccccC-----
Q psy7466         190 GRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLE--KHEVFQCTQCEKYYRS-----  262 (338)
Q Consensus       190 ~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~--~~~~~~C~~C~k~f~~-----  262 (338)
                          +.|+.|++.|. ...|..|+ ..|.    .++.|+ ||..+ .+..|..|+.+  ..+++.|.+|++.|..     
T Consensus       454 ----~~C~~Cgk~f~-~s~LekH~-~~~H----kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~  521 (567)
T PLN03086        454 ----VHCEKCGQAFQ-QGEMEKHM-KVFH----EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAM  521 (567)
T ss_pred             ----ccCCCCCCccc-hHHHHHHH-HhcC----CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCcccc
Confidence                68999999996 67899998 5552    589999 99755 66899999876  6789999999999952     


Q ss_pred             -----hhhHHHHhhccCCCCCCccccCCCCCCCCCCCCcccccccCCC
Q psy7466         263 -----QSTLDVHVSKKHPAGTGKVKRDIKPNTNILTVTPNRRSARNDS  305 (338)
Q Consensus       263 -----~~~L~~H~~~~H~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  305 (338)
                           ...|..| ...+  +.+++.|..||+.|.. ..|..|+...|.
T Consensus       522 d~~d~~s~Lt~H-E~~C--G~rt~~C~~Cgk~Vrl-rdm~~H~~~~h~  565 (567)
T PLN03086        522 DVRDRLRGMSEH-ESIC--GSRTAPCDSCGRSVML-KEMDIHQIAVHQ  565 (567)
T ss_pred             chhhhhhhHHHH-HHhc--CCcceEccccCCeeee-hhHHHHHHHhhc
Confidence                 4589999 6666  7889999999988854 467788776665

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.23  E-value=9e-12  Score=117.59  Aligned_cols=118  Identities=17%  Similarity=0.291  Sum_probs=95.6

Q ss_pred             ccchh--hHhhhcChHHHHHHHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCC
Q psy7466         114 LMKAL--DEEMFKMDEENNKEMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGR  191 (338)
Q Consensus       114 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~  191 (338)
                      ..|+.  |+..|. ...+..|         +.|+.|++.|. ...|..|+.                        .++  
T Consensus       434 V~Cp~~~Cg~v~~-r~el~~H---------~~C~~Cgk~f~-~s~LekH~~------------------------~~H--  476 (567)
T PLN03086        434 VVCPHDGCGIVLR-VEEAKNH---------VHCEKCGQAFQ-QGEMEKHMK------------------------VFH--  476 (567)
T ss_pred             eeCCcccccceee-ccccccC---------ccCCCCCCccc-hHHHHHHHH------------------------hcC--
Confidence            35774  999884 4444444         58999999995 678999983                        332  


Q ss_pred             cceeccccccccCChHHHHHHHhhhccCCCCCceecCcCcccccC----------hhHHHHHHHc-CCCceecccccccc
Q psy7466         192 SSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQ----------GSLLKAHVLE-KHEVFQCTQCEKYY  260 (338)
Q Consensus       192 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~~~f~~----------~~~l~~H~~~-~~~~~~C~~C~k~f  260 (338)
                      .++.|+ ||+.+ ....|..|+ ..|.+  .+++.|..|++.|..          ...|..|..+ +.+++.|..||+.|
T Consensus       477 kpv~Cp-Cg~~~-~R~~L~~H~-~thCp--~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~CG~rt~~C~~Cgk~V  551 (567)
T PLN03086        477 EPLQCP-CGVVL-EKEQMVQHQ-ASTCP--LRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESICGSRTAPCDSCGRSV  551 (567)
T ss_pred             CCccCC-CCCCc-chhHHHhhh-hccCC--CCceeCCCCCCccccCccccchhhhhhhHHHHHHhcCCcceEccccCCee
Confidence            679999 99765 678999998 88988  899999999999952          3579999888 88999999999999


Q ss_pred             cChhhHHHHhhccC
Q psy7466         261 RSQSTLDVHVSKKH  274 (338)
Q Consensus       261 ~~~~~L~~H~~~~H  274 (338)
                      ..+ .|..|+...|
T Consensus       552 rlr-dm~~H~~~~h  564 (567)
T PLN03086        552 MLK-EMDIHQIAVH  564 (567)
T ss_pred             eeh-hHHHHHHHhh
Confidence            776 5899988888

>PHA00733 hypothetical protein

Probab=99.13  E-value=5.5e-11  Score=92.04  Aligned_cols=83  Identities=23%  Similarity=0.353  Sum_probs=67.5

Q ss_pred             CCcceeccccccccCChHHHHHH--Hh--hhccCCCCCceecCcCcccccChhHHHHHHHcCCCceecccccccccChhh
Q psy7466         190 GRSSFKCAICFEYFSLLESLETH--IT--RRHIGICEEPYQCSQCSLCFDQGSLLKAHVLEKHEVFQCTQCEKYYRSQST  265 (338)
Q Consensus       190 ~~~~~~C~~C~~~f~~~~~l~~H--~~--~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~C~~C~k~f~~~~~  265 (338)
                      ..+++.|.+|...|.....|..|  +.  ..+.+  .+||.|+.|++.|.+...|..|++.+..+|.|..|++.|.....
T Consensus        37 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~--~kPy~C~~Cgk~Fss~s~L~~H~r~h~~~~~C~~CgK~F~~~~s  114 (128)
T PHA00733         37 EQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKA--VSPYVCPLCLMPFSSSVSLKQHIRYTEHSKVCPVCGKEFRNTDS  114 (128)
T ss_pred             hhhhHHHHHHhhhccChhhhcchHHHHhhcccCC--CCCccCCCCCCcCCCHHHHHHHHhcCCcCccCCCCCCccCCHHH
Confidence            34778999999999888777776  21  12223  67899999999999999999998876678999999999999999


Q ss_pred             HHHHhhccC
Q psy7466         266 LDVHVSKKH  274 (338)
Q Consensus       266 L~~H~~~~H  274 (338)
                      |..|+...|
T Consensus       115 L~~H~~~~h  123 (128)
T PHA00733        115 TLDHVCKKH  123 (128)
T ss_pred             HHHHHHHhc
Confidence            999988888

>KOG3993|consensus

Probab=99.09  E-value=1.6e-11  Score=108.88  Aligned_cols=192  Identities=14%  Similarity=0.000  Sum_probs=123.1

Q ss_pred             cccccchhhHhhhcChHHHHHHHHHhcCCCccccccccccccChhhHHHHHHHhhhhhh------hh------hhchhhh
Q psy7466         111 EILLMKALDEEMFKMDEENNKEMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFT------QK------KKNLSKH  178 (338)
Q Consensus       111 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~------~~------~~~l~~h  178 (338)
                      -.-|+|.+|...|.....|..|.-----...|.|+.|++.|.--.+|..|.++|.-.-.      ..      ...+...
T Consensus       265 iGdyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~e  344 (500)
T KOG3993|consen  265 IGDYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQE  344 (500)
T ss_pred             HHHHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhh
Confidence            34589999999999999999995433333469999999999999999999999911000      00      0000000


Q ss_pred             hhhhhcccccCCCcceeccccccccCChHHHHHHHhhhccCCC-CC--------------ceecCcCcccccChhHHHHH
Q psy7466         179 FFKCLMKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGIC-EE--------------PYQCSQCSLCFDQGSLLKAH  243 (338)
Q Consensus       179 ~~~c~~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~-~~--------------~~~C~~C~~~f~~~~~l~~H  243 (338)
                      .   ...........|.|.+|++.|.....|+.|+ ..|.... -+              -+-|..|+-.+.....--.|
T Consensus       345 a---~rsg~dss~gi~~C~~C~KkFrRqAYLrKHq-lthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~  420 (500)
T KOG3993|consen  345 A---ERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQ-LTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDE  420 (500)
T ss_pred             c---cccCCcccCceeecHHhhhhhHHHHHHHHhH-HhhhccccchhcccCcchhhcccccccccccccccccccccccc
Confidence            0   0001112345799999999999999999998 5553210 01              13344454444433322222


Q ss_pred             HHc---CCCceecccccccccChhhHHHHhhccCCCCCCccccCCCCCCCCCCCCcccccccCCCCCC
Q psy7466         244 VLE---KHEVFQCTQCEKYYRSQSTLDVHVSKKHPAGTGKVKRDIKPNTNILTVTPNRRSARNDSTKA  308 (338)
Q Consensus       244 ~~~---~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  308 (338)
                      ...   ......|++||-.+.++..--.|.+..+  ....|.|.+|.-+|.+...|.+|+..+|....
T Consensus       421 vl~~a~sael~~pp~~~~ppsss~~sgg~~rlg~--~~q~f~~ky~~atfyss~~ltrhin~~Hpse~  486 (500)
T KOG3993|consen  421 VLYVAGSAELELPPYDGSPPSSSGSSGGYGRLGI--AEQGFTCKYCPATFYSSPGLTRHINKCHPSEL  486 (500)
T ss_pred             eeeeeccccccCCCCCCCCcccCCCCCccccccc--hhhccccccchHhhhcCcchHhHhhhcChHHh
Confidence            111   1123457888877777765555532233  45668999999999999999999998887654

>PHA00733 hypothetical protein

Probab=99.05  E-value=1.9e-10  Score=89.03  Aligned_cols=87  Identities=25%  Similarity=0.360  Sum_probs=64.5

Q ss_pred             CCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceeccccccccCChHHHHHHHhhhcc
Q psy7466         139 GLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAICFEYFSLLESLETHITRRHI  218 (338)
Q Consensus       139 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~  218 (338)
                      .+++.|.+|...|.....|..|            ..|..|+       .+.+..||.|+.||+.|.+...|..|+ ..|.
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~------------~~l~~~~-------~~~~~kPy~C~~Cgk~Fss~s~L~~H~-r~h~   97 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDES------------SYLYKLL-------TSKAVSPYVCPLCLMPFSSSVSLKQHI-RYTE   97 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcch------------HHHHhhc-------ccCCCCCccCCCCCCcCCCHHHHHHHH-hcCC
Confidence            4567888888888887777776            2233332       333477888999999999888888888 5552


Q ss_pred             CCCCCceecCcCcccccChhHHHHHHHcCCC
Q psy7466         219 GICEEPYQCSQCSLCFDQGSLLKAHVLEKHE  249 (338)
Q Consensus       219 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~  249 (338)
                          .+|.|..|++.|.....|..|+..++.
T Consensus        98 ----~~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         98 ----HSKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             ----cCccCCCCCCccCCHHHHHHHHHHhcC
Confidence                468899999999998888888877543

>PHA02768 hypothetical protein; Provisional

Probab=98.78  E-value=2.6e-09  Score=68.17  Aligned_cols=43  Identities=19%  Similarity=0.327  Sum_probs=26.1

Q ss_pred             eecccccccccChhhHHHHhhccCCCCCCccccCCCCCCCCCCCCcc
Q psy7466         251 FQCTQCEKYYRSQSTLDVHVSKKHPAGTGKVKRDIKPNTNILTVTPN  297 (338)
Q Consensus       251 ~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~C~~C~~~f~~~~~l~  297 (338)
                      |.|+.||+.|+..++|..| ++.| .  ++|+|..|++.|...+.|.
T Consensus         6 y~C~~CGK~Fs~~~~L~~H-~r~H-~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          6 YECPICGEIYIKRKSMITH-LRKH-N--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             cCcchhCCeeccHHHHHHH-HHhc-C--CcccCCcccceecccceeE
Confidence            5666666666666666666 5556 3  4566666666666555543

>PHA02768 hypothetical protein; Provisional

Probab=98.78  E-value=3.6e-09  Score=67.54  Aligned_cols=44  Identities=11%  Similarity=0.338  Sum_probs=41.1

Q ss_pred             ceecCcCcccccChhHHHHHHHcCCCceecccccccccChhhHH
Q psy7466         224 PYQCSQCSLCFDQGSLLKAHVLEKHEVFQCTQCEKYYRSQSTLD  267 (338)
Q Consensus       224 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~C~~C~k~f~~~~~L~  267 (338)
                      .|.|+.||+.|.....|..|++++.++|+|..|++.|...+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHNTNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcCCcccCCcccceecccceeE
Confidence            58999999999999999999999889999999999999887764

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.49  E-value=9.1e-08  Score=52.15  Aligned_cols=26  Identities=19%  Similarity=0.505  Sum_probs=24.0

Q ss_pred             HHHHHHHHhcCCCccccccccccccC
Q psy7466         128 ENNKEMERISQGLEYQCSVCSQVFIE  153 (338)
Q Consensus       128 ~l~~H~~~h~~~~~~~C~~C~~~f~~  153 (338)
                      +|..||+.|++++||.|+.|++.|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            48999999999999999999999964

...

>KOG3993|consensus

Probab=98.48  E-value=3e-08  Score=88.41  Aligned_cols=155  Identities=14%  Similarity=0.064  Sum_probs=103.4

Q ss_pred             ccccchhhHhhhcChHHHHHHHHHhcC---------------------------------CCccccccccccccChhhHH
Q psy7466         112 ILLMKALDEEMFKMDEENNKEMERISQ---------------------------------GLEYQCSVCSQVFIEKKNLS  158 (338)
Q Consensus       112 ~~~~C~~C~~~f~~~~~l~~H~~~h~~---------------------------------~~~~~C~~C~~~f~~~~~L~  158 (338)
                      .-|.|+.|+++|+...+|..|.+-|..                                 ...|.|.+|+++|.....|+
T Consensus       294 vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLr  373 (500)
T KOG3993|consen  294 VEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLR  373 (500)
T ss_pred             eeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccccCCcccCceeecHHhhhhhHHHHHHH
Confidence            458999999999999999999998842                                 11389999999999999999


Q ss_pred             HHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcCcccccChh
Q psy7466         159 KHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGS  238 (338)
Q Consensus       159 ~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~~~f~~~~  238 (338)
                      .|..+|...-..+...+..-       ........+-|..|+-.+.....-..+. ..+.+. .....|++|+..+.++.
T Consensus       374 KHqlthq~~~~~k~~a~~f~-------~s~~~~l~~~~~~~a~h~~a~~~~g~~v-l~~a~s-ael~~pp~~~~ppsss~  444 (500)
T KOG3993|consen  374 KHQLTHQRAPLAKEKAPKFL-------LSRVIPLMHFNQAVATHSSASDSHGDEV-LYVAGS-AELELPPYDGSPPSSSG  444 (500)
T ss_pred             HhHHhhhccccchhcccCcc-------hhhcccccccccccccccccccccccce-eeeecc-ccccCCCCCCCCcccCC
Confidence            99877743322220000000       0001112245666665555444433343 333332 23346788888887776


Q ss_pred             HHHHHHHc--CCCceecccccccccChhhHHHHhhccCC
Q psy7466         239 LLKAHVLE--KHEVFQCTQCEKYYRSQSTLDVHVSKKHP  275 (338)
Q Consensus       239 ~l~~H~~~--~~~~~~C~~C~k~f~~~~~L~~H~~~~H~  275 (338)
                      .--.|.+.  ....|.|.+|.-.|.+..+|.+|+.+.|+
T Consensus       445 ~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~~Hp  483 (500)
T KOG3993|consen  445 SSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINKCHP  483 (500)
T ss_pred             CCCccccccchhhccccccchHhhhcCcchHhHhhhcCh
Confidence            55555433  45679999999999999999999999994

>PHA00732 hypothetical protein

Probab=98.38  E-value=2.5e-07  Score=64.95  Aligned_cols=20  Identities=40%  Similarity=0.560  Sum_probs=9.8

Q ss_pred             eeccccccccCChHHHHHHH
Q psy7466         194 FKCAICFEYFSLLESLETHI  213 (338)
Q Consensus       194 ~~C~~C~~~f~~~~~l~~H~  213 (338)
                      |.|..||+.|.+...|..|+
T Consensus         2 y~C~~Cgk~F~s~s~Lk~H~   21 (79)
T PHA00732          2 FKCPICGFTTVTLFALKQHA   21 (79)
T ss_pred             ccCCCCCCccCCHHHHHHHh
Confidence            44444444444444444444

>PHA00732 hypothetical protein

Probab=98.34  E-value=3.3e-07  Score=64.38  Aligned_cols=43  Identities=19%  Similarity=0.259  Sum_probs=21.1

Q ss_pred             eecccccccccChhhHHHHhhccCCCCCCccccCCCCCCCCCCCCccccc
Q psy7466         251 FQCTQCEKYYRSQSTLDVHVSKKHPAGTGKVKRDIKPNTNILTVTPNRRS  300 (338)
Q Consensus       251 ~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~C~~C~~~f~~~~~l~~H~  300 (338)
                      |.|..||+.|.+..+|..|++..| .   ++.|+.|++.|.   .|..|.
T Consensus         2 y~C~~Cgk~F~s~s~Lk~H~r~~H-~---~~~C~~CgKsF~---~l~~H~   44 (79)
T PHA00732          2 FKCPICGFTTVTLFALKQHARRNH-T---LTKCPVCNKSYR---RLNQHF   44 (79)
T ss_pred             ccCCCCCCccCCHHHHHHHhhccc-C---CCccCCCCCEeC---Chhhhh
Confidence            455555555555555555522234 2   234555555554   344444

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.30  E-value=2.1e-07  Score=60.69  Aligned_cols=52  Identities=23%  Similarity=0.248  Sum_probs=34.6

Q ss_pred             ceecccccccccChhhHHHHhhccCCCCCCccccCCCCCCCCCCCCcccccccCC
Q psy7466         250 VFQCTQCEKYYRSQSTLDVHVSKKHPAGTGKVKRDIKPNTNILTVTPNRRSARND  304 (338)
Q Consensus       250 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  304 (338)
                      .|.|++|++ ..+...|..|+...|....+.+.|++|...+.  ..|..|+...|
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            467777777 44556777777777744456677777777544  36777766555

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.25  E-value=7.2e-07  Score=48.56  Aligned_cols=26  Identities=42%  Similarity=1.026  Sum_probs=20.4

Q ss_pred             HHHHHHhhhccCCCCCceecCcCcccccC
Q psy7466         208 SLETHITRRHIGICEEPYQCSQCSLCFDQ  236 (338)
Q Consensus       208 ~l~~H~~~~H~~~~~~~~~C~~C~~~f~~  236 (338)
                      +|..|+ +.|.+  ++||.|+.|++.|.+
T Consensus         1 ~l~~H~-~~H~~--~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHM-RTHTG--EKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHH-HHHSS--SSSEEESSSSEEESS
T ss_pred             CHHHHh-hhcCC--CCCCCCCCCcCeeCc
Confidence            477888 67888  888888888888763

...

>PHA00616 hypothetical protein

Probab=98.20  E-value=9.9e-07  Score=53.62  Aligned_cols=39  Identities=8%  Similarity=0.035  Sum_probs=34.5

Q ss_pred             cccchhhHhhhcChHHHHHHHHHhcCCCccccccccccc
Q psy7466         113 LLMKALDEEMFKMDEENNKEMERISQGLEYQCSVCSQVF  151 (338)
Q Consensus       113 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  151 (338)
                      +|+|+.||+.|...+.|..|++.|++..++.|+.--..|
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~~y~~f   39 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEYFYIYF   39 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeEEEEEE
Confidence            689999999999999999999999999999998654443

>PHA00616 hypothetical protein

Probab=98.00  E-value=1.9e-06  Score=52.39  Aligned_cols=34  Identities=18%  Similarity=0.439  Sum_probs=26.1

Q ss_pred             ceecccccccccChhhHHHHhhccCCCCCCccccCC
Q psy7466         250 VFQCTQCEKYYRSQSTLDVHVSKKHPAGTGKVKRDI  285 (338)
Q Consensus       250 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~C~~  285 (338)
                      ||+|+.||+.|...+.|..|+ +.| .+.+++.|+.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~-r~~-hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHL-LSV-HKQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHH-HHh-cCCCccceeE
Confidence            588888888888888888885 444 4677777764

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.00  E-value=8.3e-06  Score=53.11  Aligned_cols=50  Identities=26%  Similarity=0.313  Sum_probs=32.9

Q ss_pred             ceeccccccccCChHHHHHHHhhhccCCCCCceecCcCcccccChhHHHHHHHc
Q psy7466         193 SFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLE  246 (338)
Q Consensus       193 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~  246 (338)
                      .|.|++|++ ..+...|..|....|... .+.+.|++|...+.  ..|..|+..
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~-~~~v~CPiC~~~~~--~~l~~Hl~~   51 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSE-SKNVVCPICSSRVT--DNLIRHLNS   51 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCC-CCCccCCCchhhhh--hHHHHHHHH
Confidence            377888888 455677888876677663 34677777776544  366666654

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.91  E-value=3.5e-06  Score=72.72  Aligned_cols=55  Identities=16%  Similarity=0.271  Sum_probs=32.7

Q ss_pred             CCceeccc--ccccccChhhHHHHhhccCC-----------------CCCCccccCCCCCCCCCCCCccccccc
Q psy7466         248 HEVFQCTQ--CEKYYRSQSTLDVHVSKKHP-----------------AGTGKVKRDIKPNTNILTVTPNRRSAR  302 (338)
Q Consensus       248 ~~~~~C~~--C~k~f~~~~~L~~H~~~~H~-----------------~~~~~~~C~~C~~~f~~~~~l~~H~~~  302 (338)
                      ++||+|++  |.|.|.+...|+.|+.--|-                 ...+||.|+.|++.|.....|+.|+..
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~H  420 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRKH  420 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceecccc
Confidence            35555554  55555555555555433330                 234677777777777777777777643

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.75  E-value=1.6e-05  Score=58.98  Aligned_cols=72  Identities=28%  Similarity=0.491  Sum_probs=20.9

Q ss_pred             eccccccccCChHHHHHHHhhhccCCCCCceecCcCcccccChhHHHHHHHc-CCCceecccccccccChhhHHHHhhcc
Q psy7466         195 KCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLE-KHEVFQCTQCEKYYRSQSTLDVHVSKK  273 (338)
Q Consensus       195 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~-~~~~~~C~~C~k~f~~~~~L~~H~~~~  273 (338)
                      +|.+|+..|.+...|..|+...|..  ..+     ....+.....+..++.. ....+.|..|++.|.+...|..|+...
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~--~~~-----~~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGF--DIP-----DQKYLVDPNRLLNYLRKKVKESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             -------------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             Ccccccccccccccccccccccccc--ccc-----cccccccccccccccccccCCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            5899999999999999999777754  222     11222244444445444 334699999999999999999997654

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.70  E-value=2.4e-05  Score=41.15  Aligned_cols=22  Identities=36%  Similarity=0.955  Sum_probs=14.5

Q ss_pred             cccccccccccChhhHHHHHHH
Q psy7466         142 YQCSVCSQVFIEKKNLSKHFFK  163 (338)
Q Consensus       142 ~~C~~C~~~f~~~~~L~~H~~~  163 (338)
                      |.|+.|++.|.+...|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            4666677777777777666643

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.66  E-value=2.9e-05  Score=67.23  Aligned_cols=49  Identities=31%  Similarity=0.731  Sum_probs=45.3

Q ss_pred             CCceecCc--CcccccChhHHHHHHHcCC---------------------CceecccccccccChhhHHHHh
Q psy7466         222 EEPYQCSQ--CSLCFDQGSLLKAHVLEKH---------------------EVFQCTQCEKYYRSQSTLDVHV  270 (338)
Q Consensus       222 ~~~~~C~~--C~~~f~~~~~l~~H~~~~~---------------------~~~~C~~C~k~f~~~~~L~~H~  270 (338)
                      ++||+|++  |.+.+.....|+.|+..|+                     +||.|++|+|.|.+...|+.|+
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr  418 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHR  418 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceecc
Confidence            59999988  9999999999999988755                     6999999999999999999993

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.53  E-value=5.8e-05  Score=39.66  Aligned_cols=20  Identities=40%  Similarity=0.821  Sum_probs=13.6

Q ss_pred             eeccccccccCChHHHHHHH
Q psy7466         194 FKCAICFEYFSLLESLETHI  213 (338)
Q Consensus       194 ~~C~~C~~~f~~~~~l~~H~  213 (338)
                      |.|+.|++.|.+...|..|+
T Consensus         1 y~C~~C~~~f~~~~~l~~H~   20 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHM   20 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHH
Confidence            56666777777666666666

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.40  E-value=0.0001  Score=38.98  Aligned_cols=23  Identities=43%  Similarity=0.830  Sum_probs=13.3

Q ss_pred             eecccccccccChhhHHHHhhcc
Q psy7466         251 FQCTQCEKYYRSQSTLDVHVSKK  273 (338)
Q Consensus       251 ~~C~~C~k~f~~~~~L~~H~~~~  273 (338)
                      |.|++|++.|.+...|..|+...
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            56666666776666666664433

...

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.28  E-value=0.00017  Score=53.39  Aligned_cols=22  Identities=36%  Similarity=0.785  Sum_probs=15.3

Q ss_pred             ceeccccccccCChHHHHHHHh
Q psy7466         193 SFKCAICFEYFSLLESLETHIT  214 (338)
Q Consensus       193 ~~~C~~C~~~f~~~~~l~~H~~  214 (338)
                      .+.|.+|++.|.+...|..||+
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~   71 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMR   71 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHH
T ss_pred             CCCCCccCCCCcCHHHHHHHHc
Confidence            4777777777777777777773

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.22  E-value=0.00027  Score=37.27  Aligned_cols=20  Identities=35%  Similarity=0.763  Sum_probs=12.0

Q ss_pred             eeccccccccCChHHHHHHH
Q psy7466         194 FKCAICFEYFSLLESLETHI  213 (338)
Q Consensus       194 ~~C~~C~~~f~~~~~l~~H~  213 (338)
                      |.|++|++.|.+...|..|+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~   20 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHM   20 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHH
Confidence            45666666666666666666

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.14  E-value=0.00029  Score=38.53  Aligned_cols=24  Identities=38%  Similarity=0.793  Sum_probs=19.6

Q ss_pred             ceecccccccccChhhHHHHhhccC
Q psy7466         250 VFQCTQCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       250 ~~~C~~C~k~f~~~~~L~~H~~~~H  274 (338)
                      +|.|..|++.|.+...|..| ++.|
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H-~~~h   24 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREH-KRSH   24 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHH-HCTT
T ss_pred             CCCCCccCCccCChhHHHHH-hHHh
Confidence            57888888888888888888 5555

>KOG1146|consensus

Probab=97.12  E-value=0.0003  Score=71.97  Aligned_cols=59  Identities=24%  Similarity=0.459  Sum_probs=41.3

Q ss_pred             cccCCCcceeccccccccCChHHHHHHHhhhccCC----------------------CCCceecCcCcccccChhHHHHH
Q psy7466         186 FTQSGRSSFKCAICFEYFSLLESLETHITRRHIGI----------------------CEEPYQCSQCSLCFDQGSLLKAH  243 (338)
Q Consensus       186 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~----------------------~~~~~~C~~C~~~f~~~~~l~~H  243 (338)
                      ..+.-.+.|+|+.|+..|.....|..||+..|...                      +.++|.|..|..++..+..|..|
T Consensus       458 ~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~Lsih  537 (1406)
T KOG1146|consen  458 VLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSIH  537 (1406)
T ss_pred             eeecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceeeeeeeecchHHHHH
Confidence            45555688999999999999999999997766431                      12345555555555555555555


Q ss_pred             H
Q psy7466         244 V  244 (338)
Q Consensus       244 ~  244 (338)
                      +
T Consensus       538 l  538 (1406)
T KOG1146|consen  538 L  538 (1406)
T ss_pred             H
Confidence            4

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.00  E-value=0.00055  Score=37.40  Aligned_cols=24  Identities=42%  Similarity=0.747  Sum_probs=17.7

Q ss_pred             ceeccccccccCChHHHHHHHhhhc
Q psy7466         193 SFKCAICFEYFSLLESLETHITRRH  217 (338)
Q Consensus       193 ~~~C~~C~~~f~~~~~l~~H~~~~H  217 (338)
                      +|.|..|++.|.+...|..|+ +.|
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~-~~h   24 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHK-RSH   24 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHH-CTT
T ss_pred             CCCCCccCCccCChhHHHHHh-HHh
Confidence            477777887787777777777 544

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=96.78  E-value=0.0024  Score=56.29  Aligned_cols=131  Identities=21%  Similarity=0.247  Sum_probs=87.6

Q ss_pred             cccchh--hHhhhcChHHHHHHHHHhcCCCcccccccc---ccccC------hhhHHHHHHHhhhhhhhhhhchhhhhhh
Q psy7466         113 LLMKAL--DEEMFKMDEENNKEMERISQGLEYQCSVCS---QVFIE------KKNLSKHFFKCLMKFTQKKKNLSKHFFK  181 (338)
Q Consensus       113 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~---~~f~~------~~~L~~H~~~h~~~f~~~~~~l~~h~~~  181 (338)
                      .|.|+.  |.........|..|.+.-++.  +.|.+|-   +.|..      ...|..|.                    
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~~--~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~--------------------  208 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHGF--VLCSECIGNKKDFWNEIRLFRSSTLRDHK--------------------  208 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcCc--EEhHhhhcCcccCccceeeeecccccccc--------------------
Confidence            466764  777777788899998875543  5788873   23332      33344442                    


Q ss_pred             hhcccccCCC----cceeccccccccCChHHHHHHHhhhccCCCCCceecCcCc----ccccChhHHHHHHHcCCCceec
Q psy7466         182 CLMKFTQSGR----SSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCS----LCFDQGSLLKAHVLEKHEVFQC  253 (338)
Q Consensus       182 c~~~~~h~~~----~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~----~~f~~~~~l~~H~~~~~~~~~C  253 (338)
                          ..-..+    .--.|.+|...|-+...|..|++..|    ++-|.|..-+    .-|..-..|..|.+..  -|.|
T Consensus       209 ----~~G~~e~GFKGHP~C~FC~~~FYdDDEL~~HcR~~H----E~ChICD~v~p~~~QYFK~Y~~Le~HF~~~--hy~c  278 (493)
T COG5236         209 ----NGGLEEEGFKGHPLCIFCKIYFYDDDELRRHCRLRH----EACHICDMVGPIRYQYFKSYEDLEAHFRNA--HYCC  278 (493)
T ss_pred             ----cCCccccCcCCCchhhhccceecChHHHHHHHHhhh----hhhhhhhccCccchhhhhCHHHHHHHhhcC--ceEE
Confidence                111111    12369999999999999999997667    4455554433    2377888899997653  3666


Q ss_pred             cc--cc----ccccChhhHHHHhhccCC
Q psy7466         254 TQ--CE----KYYRSQSTLDVHVSKKHP  275 (338)
Q Consensus       254 ~~--C~----k~f~~~~~L~~H~~~~H~  275 (338)
                      ..  |-    ..|.....|..|+.+.|.
T Consensus       279 t~qtc~~~k~~vf~~~~el~~h~~~~h~  306 (493)
T COG5236         279 TFQTCRVGKCYVFPYHTELLEHLTRFHK  306 (493)
T ss_pred             EEEEEecCcEEEeccHHHHHHHHHHHhh
Confidence            54  52    589999999999999993

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=96.65  E-value=0.0006  Score=59.90  Aligned_cols=138  Identities=17%  Similarity=0.221  Sum_probs=92.4

Q ss_pred             cccccc--ccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceeccccc---------cccCChHHH
Q psy7466         141 EYQCSV--CSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAICF---------EYFSLLESL  209 (338)
Q Consensus       141 ~~~C~~--C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C~---------~~f~~~~~l  209 (338)
                      .|.|+.  |..+......|..|.+..+.                          .+.|.+|-         ....+...|
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~--------------------------~~~C~~C~~nKk~F~~E~~lF~~~~L  204 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHG--------------------------FVLCSECIGNKKDFWNEIRLFRSSTL  204 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcC--------------------------cEEhHhhhcCcccCccceeeeecccc
Confidence            388886  77777778889999753211                          24444442         223345667


Q ss_pred             HHHHhhhccCCCCC-ceecCcCcccccChhHHHHHHHc-CCCceeccccc----ccccChhhHHHHhhccCCCCCCcccc
Q psy7466         210 ETHITRRHIGICEE-PYQCSQCSLCFDQGSLLKAHVLE-KHEVFQCTQCE----KYYRSQSTLDVHVSKKHPAGTGKVKR  283 (338)
Q Consensus       210 ~~H~~~~H~~~~~~-~~~C~~C~~~f~~~~~l~~H~~~-~~~~~~C~~C~----k~f~~~~~L~~H~~~~H~~~~~~~~C  283 (338)
                      +.|...--.+.|-+ --.|..|...|..-..|..|++. +++=|.|+.=+    ..|.+...|..|....|      |.|
T Consensus       205 r~H~~~G~~e~GFKGHP~C~FC~~~FYdDDEL~~HcR~~HE~ChICD~v~p~~~QYFK~Y~~Le~HF~~~h------y~c  278 (493)
T COG5236         205 RDHKNGGLEEEGFKGHPLCIFCKIYFYDDDELRRHCRLRHEACHICDMVGPIRYQYFKSYEDLEAHFRNAH------YCC  278 (493)
T ss_pred             cccccCCccccCcCCCchhhhccceecChHHHHHHHHhhhhhhhhhhccCccchhhhhCHHHHHHHhhcCc------eEE
Confidence            77752111111111 12599999999999999999998 55545554322    36888899999988888      777


Q ss_pred             CC--CC----CCCCCCCCcccccccCCCCCCCc
Q psy7466         284 DI--KP----NTNILTVTPNRRSARNDSTKATV  310 (338)
Q Consensus       284 ~~--C~----~~f~~~~~l~~H~~~~h~~~~~~  310 (338)
                      ..  |-    +.|.....|..|+.+-|+.....
T Consensus       279 t~qtc~~~k~~vf~~~~el~~h~~~~h~~~~~~  311 (493)
T COG5236         279 TFQTCRVGKCYVFPYHTELLEHLTRFHKVNARL  311 (493)
T ss_pred             EEEEEecCcEEEeccHHHHHHHHHHHhhccccc
Confidence            55  43    56888889999998888776543

>KOG2231|consensus

Probab=96.61  E-value=0.0017  Score=63.08  Aligned_cols=101  Identities=17%  Similarity=0.197  Sum_probs=64.4

Q ss_pred             eccccccccCChHHHHHHHhhhccCCCCCceecCcCc---------ccccChhHHHHHHHcCCC-------ceecccccc
Q psy7466         195 KCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCS---------LCFDQGSLLKAHVLEKHE-------VFQCTQCEK  258 (338)
Q Consensus       195 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~---------~~f~~~~~l~~H~~~~~~-------~~~C~~C~k  258 (338)
                      .|..| -.|.+...|+.|+...|..     +.|.+|-         ....+...|..|+..+..       --.|..|..
T Consensus       117 ~~~~c-~~~~s~~~Lk~H~~~~H~~-----~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~d~~s~rGhp~C~~C~~  190 (669)
T KOG2231|consen  117 ECLHC-TEFKSVENLKNHMRDQHKL-----HLCSLCLQNLKIFINERKLYTRAELNLHLMFGDPDDESCRGHPLCKFCHE  190 (669)
T ss_pred             CCccc-cchhHHHHHHHHHHHhhhh-----hccccccccceeeeeeeehehHHHHHHHHhcCCCccccccCCccchhhhh
Confidence            45555 4555788889998666633     4444433         233456677788776321       146888888


Q ss_pred             cccChhhHHHHhhccCCCCCCccccCCCC------CCCCCCCCcccccccCCCCC
Q psy7466         259 YYRSQSTLDVHVSKKHPAGTGKVKRDIKP------NTNILTVTPNRRSARNDSTK  307 (338)
Q Consensus       259 ~f~~~~~L~~H~~~~H~~~~~~~~C~~C~------~~f~~~~~l~~H~~~~h~~~  307 (338)
                      .|-....|.+|+...|      |.|..|.      ..|.....|..|-+..|-.-
T Consensus       191 ~fld~~el~rH~~~~h------~~chfC~~~~~~neyy~~~~dLe~HfR~~HflC  239 (669)
T KOG2231|consen  191 RFLDDDELYRHLRFDH------EFCHFCDYKTGQNEYYNDYDDLEEHFRKGHFLC  239 (669)
T ss_pred             hhccHHHHHHhhccce------eheeecCcccccchhcccchHHHHHhhhcCccc
Confidence            8888888888866666      6666663      45555666777776666544

>KOG2482|consensus

Probab=96.60  E-value=0.0028  Score=55.73  Aligned_cols=111  Identities=17%  Similarity=0.187  Sum_probs=85.1

Q ss_pred             ceeccccccccC-ChHHHHHHHhhhccCCCCC-------------------ceecCcCcccccChhHHHHHHHc-CCC--
Q psy7466         193 SFKCAICFEYFS-LLESLETHITRRHIGICEE-------------------PYQCSQCSLCFDQGSLLKAHVLE-KHE--  249 (338)
Q Consensus       193 ~~~C~~C~~~f~-~~~~l~~H~~~~H~~~~~~-------------------~~~C~~C~~~f~~~~~l~~H~~~-~~~--  249 (338)
                      ..+|-.|+..+. +++.+..|+-..|.-.-..                   .+.|-+|.+.|..+..|+.||+. +++  
T Consensus       144 slqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r~~CLyCekifrdkntLkeHMrkK~Hrri  223 (423)
T KOG2482|consen  144 SLQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLERLRCLYCEKIFRDKNTLKEHMRKKRHRRI  223 (423)
T ss_pred             eeEEEEecchhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhhheeeeeccccCCcHHHHHHHHhccCccc
Confidence            457989987664 5677788876666432112                   27899999999999999999987 332  


Q ss_pred             -------------------------------------------------------ceecccccccccChhhHHHHhhccC
Q psy7466         250 -------------------------------------------------------VFQCTQCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       250 -------------------------------------------------------~~~C~~C~k~f~~~~~L~~H~~~~H  274 (338)
                                                                             ...|-.|....-+...|..|+..+|
T Consensus       224 nPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~a~a~~v~CLfC~~~~en~~~l~eHmk~vH  303 (423)
T KOG2482|consen  224 NPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDDAEALSVVCLFCTNFYENPVFLFEHMKIVH  303 (423)
T ss_pred             CCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcCCCCccceEEEeeccchhhHHHHHHHHHHHH
Confidence                                                                   2589999999999999999999999


Q ss_pred             CC-------------------------CCCccccCCCCCCCCCCCCcccccccC
Q psy7466         275 PA-------------------------GTGKVKRDIKPNTNILTVTPNRRSARN  303 (338)
Q Consensus       275 ~~-------------------------~~~~~~C~~C~~~f~~~~~l~~H~~~~  303 (338)
                      .-                         ....-.|..|...|.....|..|+..+
T Consensus       304 e~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm~e~  357 (423)
T KOG2482|consen  304 EFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHMVED  357 (423)
T ss_pred             HhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhcccc
Confidence            31                         112346899999999999999998754

>smart00355 ZnF_C2H2 zinc finger

Probab=96.44  E-value=0.0023  Score=34.12  Aligned_cols=23  Identities=35%  Similarity=0.764  Sum_probs=17.1

Q ss_pred             cccccccccccChhhHHHHHHHh
Q psy7466         142 YQCSVCSQVFIEKKNLSKHFFKC  164 (338)
Q Consensus       142 ~~C~~C~~~f~~~~~L~~H~~~h  164 (338)
                      |.|..|++.|.+...|..|++.|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            46788888888888888887543

>KOG1146|consensus

Probab=96.32  E-value=0.002  Score=66.30  Aligned_cols=112  Identities=16%  Similarity=0.270  Sum_probs=90.2

Q ss_pred             eccccccccCChHHHHHHHhhhccCCCCCceecCcCcccccChhHHHHHHHcCC--------------------------
Q psy7466         195 KCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLEKH--------------------------  248 (338)
Q Consensus       195 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~--------------------------  248 (338)
                      .|.-|+..+.+...+..|+...|..  .+.|+|+.|+..|.....|..|++..+                          
T Consensus       438 e~~~~e~~~~s~r~~~~~t~~L~S~--~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~  515 (1406)
T KOG1146|consen  438 ELTKAEPLLESKRSLEGQTVVLHSF--FKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCP  515 (1406)
T ss_pred             cccchhhhhhhhcccccceeeeecc--cccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCC
Confidence            4566777788888888888677877  689999999999999999999998721                          


Q ss_pred             -CceecccccccccChhhHHHHhhc-cCC----------------------------------CC------CCccccCCC
Q psy7466         249 -EVFQCTQCEKYYRSQSTLDVHVSK-KHP----------------------------------AG------TGKVKRDIK  286 (338)
Q Consensus       249 -~~~~C~~C~k~f~~~~~L~~H~~~-~H~----------------------------------~~------~~~~~C~~C  286 (338)
                       ++|.|..|...+..+.+|..|++. .|.                                  .+      .-.+.|..|
T Consensus       516 ~~p~~C~~C~~stttng~LsihlqS~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C~vc  595 (1406)
T KOG1146|consen  516 GKPYPCRACNYSTTTNGNLSIHLQSDLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRCEVC  595 (1406)
T ss_pred             CCcccceeeeeeeecchHHHHHHHHHhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcchhhh
Confidence             279999999999999999999755 341                                  01      124899999


Q ss_pred             CCCCCCCCCcccccccCCCCCC
Q psy7466         287 PNTNILTVTPNRRSARNDSTKA  308 (338)
Q Consensus       287 ~~~f~~~~~l~~H~~~~h~~~~  308 (338)
                      ++...-...|+.|+...+....
T Consensus       596 ~yetniarnlrihmtss~~s~~  617 (1406)
T KOG1146|consen  596 SYETNIARNLRIHMTASPSSSP  617 (1406)
T ss_pred             cchhhhhhccccccccCCCCCC
Confidence            9999999999999986554444

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.31  E-value=0.0036  Score=39.07  Aligned_cols=35  Identities=9%  Similarity=0.010  Sum_probs=22.9

Q ss_pred             cccccccccchhhHhhhcChHHHHHHHHHhcCCCc
Q psy7466         107 KKKDEILLMKALDEEMFKMDEENNKEMERISQGLE  141 (338)
Q Consensus       107 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  141 (338)
                      ......+-.|++|+..+....+|.+|+..+++.+|
T Consensus        18 ~~~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   18 KSQSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             CCTTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             hhccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            34456777899999999988999999888777654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>KOG4173|consensus

Probab=96.20  E-value=0.0036  Score=51.12  Aligned_cols=92  Identities=17%  Similarity=0.352  Sum_probs=72.3

Q ss_pred             cccccchh--hHhhhcChHHHHHHHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhccccc
Q psy7466         111 EILLMKAL--DEEMFKMDEENNKEMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQ  188 (338)
Q Consensus       111 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h  188 (338)
                      ...|.|++  |...|.+...+..|..+-++.   .|.+|.+.|.+...|..|+..-+..|.+.              ...
T Consensus        77 ~~~~~cqvagc~~~~d~lD~~E~hY~~~h~~---sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa--------------~ve  139 (253)
T KOG4173|consen   77 VPAFACQVAGCCQVFDALDDYEHHYHTLHGN---SCSFCKRAFPTGHLLDAHILEWHDSLFQA--------------LVE  139 (253)
T ss_pred             cccccccccchHHHHhhhhhHHHhhhhcccc---hhHHHHHhCCchhhhhHHHHHHHHHHHHH--------------HHH
Confidence            34466765  889999999999998775554   79999999999999999985444444444              455


Q ss_pred             CCCcceeccc--cccccCChHHHHHHHhhhccC
Q psy7466         189 SGRSSFKCAI--CFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       189 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      .|..-|.|-+  |+..|.+...-..|+...|.-
T Consensus       140 RG~dMy~ClvEgCt~KFkT~r~RkdH~I~~Hk~  172 (253)
T KOG4173|consen  140 RGQDMYQCLVEGCTEKFKTSRDRKDHMIRMHKY  172 (253)
T ss_pred             cCccHHHHHHHhhhhhhhhhhhhhhHHHHhccC
Confidence            5667799966  999999999999999788865

>KOG2231|consensus

Probab=96.15  E-value=0.0068  Score=58.99  Aligned_cols=161  Identities=17%  Similarity=0.203  Sum_probs=92.3

Q ss_pred             cccchhhHhhhc---------------ChHHHHHHHHHhcCCCcccccccc---------ccccChhhHHHHHHHhhhhh
Q psy7466         113 LLMKALDEEMFK---------------MDEENNKEMERISQGLEYQCSVCS---------QVFIEKKNLSKHFFKCLMKF  168 (338)
Q Consensus       113 ~~~C~~C~~~f~---------------~~~~l~~H~~~h~~~~~~~C~~C~---------~~f~~~~~L~~H~~~h~~~f  168 (338)
                      .+.|.+|+..|.               +...|+.||...|.  .+.|.+|-         ....+...|+.|++.-    
T Consensus        99 ~~~C~~C~~~~~~~~~~~~~~~c~~~~s~~~Lk~H~~~~H~--~~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~g----  172 (669)
T KOG2231|consen   99 HHSCHICDRRFRALYNKKECLHCTEFKSVENLKNHMRDQHK--LHLCSLCLQNLKIFINERKLYTRAELNLHLMFG----  172 (669)
T ss_pred             hhhcCccccchhhhcccCCCccccchhHHHHHHHHHHHhhh--hhccccccccceeeeeeeehehHHHHHHHHhcC----
Confidence            367888887773               56777888754332  23555542         2344556666765211    


Q ss_pred             hhhhhchhhhhhhhhcccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC------cccccChhHHHH
Q psy7466         169 TQKKKNLSKHFFKCLMKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC------SLCFDQGSLLKA  242 (338)
Q Consensus       169 ~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C------~~~f~~~~~l~~  242 (338)
                                   +.-...+.|  --.|..|...|.....|..|++..|       |.|..|      +.-|.....|..
T Consensus       173 -------------d~d~~s~rG--hp~C~~C~~~fld~~el~rH~~~~h-------~~chfC~~~~~~neyy~~~~dLe~  230 (669)
T KOG2231|consen  173 -------------DPDDESCRG--HPLCKFCHERFLDDDELYRHLRFDH-------EFCHFCDYKTGQNEYYNDYDDLEE  230 (669)
T ss_pred             -------------CCccccccC--CccchhhhhhhccHHHHHHhhccce-------eheeecCcccccchhcccchHHHH
Confidence                         000012222  2469999999999999999984444       445555      345777788999


Q ss_pred             HHHcCCCceecc--ccc-ccccC----hhhHHHHhhccCCCCCCccccC--CCC----CCCCCCCCcccccccCCC
Q psy7466         243 HVLEKHEVFQCT--QCE-KYYRS----QSTLDVHVSKKHPAGTGKVKRD--IKP----NTNILTVTPNRRSARNDS  305 (338)
Q Consensus       243 H~~~~~~~~~C~--~C~-k~f~~----~~~L~~H~~~~H~~~~~~~~C~--~C~----~~f~~~~~l~~H~~~~h~  305 (338)
                      |.+.+|  |.|.  .|. +.|..    ...|..| .+.+ .-++.|.|.  .=|    ..+.....+..|.+..+.
T Consensus       231 HfR~~H--flCE~~~C~~~~f~~~~~~ei~lk~~-~~~~-~~e~~~~~~~~r~Gr~s~~~r~~~~~~~~~~~~~~~  302 (669)
T KOG2231|consen  231 HFRKGH--FLCEEEFCRTKKFYVAFELEIELKAH-NRFI-QHEKCYICRPSRPGRPSSRYRGPYRRLESHFRVSDE  302 (669)
T ss_pred             HhhhcC--ccccccccccceeeehhHHHHHHHhh-cccc-chheeccCCcccCCCCcccccCCccccccccccccc
Confidence            988765  5666  453 33333    3444444 2333 446667775  333    233344455566665554

>smart00355 ZnF_C2H2 zinc finger

Probab=96.06  E-value=0.0032  Score=33.53  Aligned_cols=23  Identities=35%  Similarity=0.912  Sum_probs=17.3

Q ss_pred             eecccccccccChhhHHHHhhccC
Q psy7466         251 FQCTQCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       251 ~~C~~C~k~f~~~~~L~~H~~~~H  274 (338)
                      |.|..|++.|.+...|..| +..|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H-~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEH-MRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHH-HHHh
Confidence            5688888888888888888 4466

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=95.90  E-value=0.0042  Score=33.10  Aligned_cols=21  Identities=24%  Similarity=0.790  Sum_probs=16.3

Q ss_pred             cccccccccccChhhHHHHHH
Q psy7466         142 YQCSVCSQVFIEKKNLSKHFF  162 (338)
Q Consensus       142 ~~C~~C~~~f~~~~~L~~H~~  162 (338)
                      |.|.+|+..|.+...|..|++
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCCcCCHHHHHHHHC
Confidence            568888888888888888873

>PRK04860 hypothetical protein; Provisional

Probab=95.82  E-value=0.0048  Score=49.63  Aligned_cols=39  Identities=18%  Similarity=0.330  Sum_probs=31.3

Q ss_pred             ceecccccccccChhhHHHHhhccCCCCCCccccCCCCCCCCCCC
Q psy7466         250 VFQCTQCEKYYRSQSTLDVHVSKKHPAGTGKVKRDIKPNTNILTV  294 (338)
Q Consensus       250 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~C~~C~~~f~~~~  294 (338)
                      +|.|. |+.   ....+..| .++| +++++|.|..|+..|....
T Consensus       119 ~Y~C~-C~~---~~~~~rrH-~ri~-~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRH-NRVV-RGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEcC-CCC---eeCHHHHH-HHHh-cCCccEECCCCCceeEEec
Confidence            68887 887   66778888 8888 8888888888888876543

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=95.67  E-value=0.0083  Score=31.91  Aligned_cols=20  Identities=45%  Similarity=0.806  Sum_probs=13.7

Q ss_pred             eeccccccccCChHHHHHHH
Q psy7466         194 FKCAICFEYFSLLESLETHI  213 (338)
Q Consensus       194 ~~C~~C~~~f~~~~~l~~H~  213 (338)
                      |.|.+|+..|.+...|..|+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~   20 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHL   20 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHH
T ss_pred             CCCCCCCCCcCCHHHHHHHH
Confidence            45677777777777777776

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=95.66  E-value=0.0052  Score=32.43  Aligned_cols=23  Identities=26%  Similarity=0.709  Sum_probs=14.4

Q ss_pred             eecccccccccChhhHHHHhhccC
Q psy7466         251 FQCTQCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       251 ~~C~~C~k~f~~~~~L~~H~~~~H  274 (338)
                      |.|+.|++... ...|..|++..|
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            56777777776 777777755545

>KOG2785|consensus

Probab=95.60  E-value=0.0093  Score=53.57  Aligned_cols=158  Identities=13%  Similarity=0.105  Sum_probs=93.3

Q ss_pred             cccccccccccChhhHHHHHHH--hh---------------hhhhhhhhchhhhhhhhhcccccCCCcceeccccccccC
Q psy7466         142 YQCSVCSQVFIEKKNLSKHFFK--CL---------------MKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAICFEYFS  204 (338)
Q Consensus       142 ~~C~~C~~~f~~~~~L~~H~~~--h~---------------~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C~~~f~  204 (338)
                      |.|..|...|.+...-+.|+++  |.               ..|..+-.....-    .....-.+..++.|.+|.+.|.
T Consensus         4 ftC~tC~v~F~~ad~Qr~HyKSdWHRYNLKRkVA~lPPItaE~F~~k~~s~~~~----~~~~~e~~~~~~~c~~c~k~~~   79 (390)
T KOG2785|consen    4 FTCNTCNVEFDDADEQRAHYKSDWHRYNLKRKVASLPPITAEEFNEKVLSDDSE----KEENLEEAESVVYCEACNKSFA   79 (390)
T ss_pred             ceeeceeeeeccHHHHHHHhhhhHHHhhHHhHhhcCCCcCHHHHhHHHhhhhhh----hhhhhhhcccceehHHhhcccc
Confidence            6788888888887777777753  21               0111110000000    0001133456799999999999


Q ss_pred             ChHHHHHHHhhh-ccCCCCC-------------cee-------------cCcCcccccChhHHHHHHHc-----------
Q psy7466         205 LLESLETHITRR-HIGICEE-------------PYQ-------------CSQCSLCFDQGSLLKAHVLE-----------  246 (338)
Q Consensus       205 ~~~~l~~H~~~~-H~~~~~~-------------~~~-------------C~~C~~~f~~~~~l~~H~~~-----------  246 (338)
                      +..+...|+... |.....+             .+.             +..+...+........+...           
T Consensus        80 s~~a~~~hl~Sk~h~~~~~~~~r~~e~d~a~~~q~~~~~p~~l~~~~e~e~~~~E~~~~~d~~~e~~~dd~~Edi~~d~~  159 (390)
T KOG2785|consen   80 SPKAHENHLKSKKHVENLSNHQRSEEGDSAKISQLPSRRPSNLQNKGESELKWYEVDSDEDSSEEEEEDDEEEDIEEDGD  159 (390)
T ss_pred             ChhhHHHHHHHhhcchhhhhhhccccccchhhhhccccCccccccCCCcccchhhcccccccchhhccCcchhhhhhccc
Confidence            999999997422 3211111             111             22222222222222222111           


Q ss_pred             ---CCCceecccccccccChhhHHHHhhccCCC---------------------CCCccccCCCC---CCCCCCCCcccc
Q psy7466         247 ---KHEVFQCTQCEKYYRSQSTLDVHVSKKHPA---------------------GTGKVKRDIKP---NTNILTVTPNRR  299 (338)
Q Consensus       247 ---~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~---------------------~~~~~~C~~C~---~~f~~~~~l~~H  299 (338)
                         ..-|-.|-.|++.|.+...-..||...|.-                     -...|.|-.|+   +.|.+..+.+.|
T Consensus       160 ~e~e~~Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~H  239 (390)
T KOG2785|consen  160 DEDELIPTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAH  239 (390)
T ss_pred             hhcccCCcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHH
Confidence               112578999999999999999997777720                     12357899999   999999999999


Q ss_pred             cccC
Q psy7466         300 SARN  303 (338)
Q Consensus       300 ~~~~  303 (338)
                      |...
T Consensus       240 M~~K  243 (390)
T KOG2785|consen  240 MRDK  243 (390)
T ss_pred             Hhhc
Confidence            8654

>PRK04860 hypothetical protein; Provisional

Probab=95.46  E-value=0.0058  Score=49.19  Aligned_cols=41  Identities=12%  Similarity=0.192  Sum_probs=35.8

Q ss_pred             cccccchhhHhhhcChHHHHHHHHHhcCCCccccccccccccChh
Q psy7466         111 EILLMKALDEEMFKMDEENNKEMERISQGLEYQCSVCSQVFIEKK  155 (338)
Q Consensus       111 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~  155 (338)
                      .-+|.|. |+.   ....+.+|.++|++.++|.|..|+..|....
T Consensus       117 ~~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        117 TFPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEec
Confidence            4689998 998   6778999999999999999999999886543

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=95.37  E-value=0.022  Score=35.63  Aligned_cols=30  Identities=23%  Similarity=0.456  Sum_probs=16.9

Q ss_pred             CCCcceeccccccccCChHHHHHHHhhhcc
Q psy7466         189 SGRSSFKCAICFEYFSLLESLETHITRRHI  218 (338)
Q Consensus       189 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~  218 (338)
                      ....|-.|++|+..+....+|++|+...|.
T Consensus        20 ~S~~PatCP~C~a~~~~srnLrRHle~~H~   49 (54)
T PF09237_consen   20 QSEQPATCPICGAVIRQSRNLRRHLEIRHF   49 (54)
T ss_dssp             TTS--EE-TTT--EESSHHHHHHHHHHHTT
T ss_pred             ccCCCCCCCcchhhccchhhHHHHHHHHhc
Confidence            345567777777777777777777755554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=95.27  E-value=0.016  Score=30.51  Aligned_cols=20  Identities=30%  Similarity=0.582  Sum_probs=11.3

Q ss_pred             eeccccccccCChHHHHHHHh
Q psy7466         194 FKCAICFEYFSLLESLETHIT  214 (338)
Q Consensus       194 ~~C~~C~~~f~~~~~l~~H~~  214 (338)
                      |+|+.|+.... ...|..|++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~   20 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLK   20 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHH
Confidence            45666666665 666666663

>KOG4173|consensus

Probab=95.20  E-value=0.0084  Score=49.03  Aligned_cols=77  Identities=31%  Similarity=0.718  Sum_probs=65.1

Q ss_pred             cceeccc--cccccCChHHHHHHHhhhccCCCCCceecCcCcccccChhHHHHHHHc------------CCCceeccc--
Q psy7466         192 SSFKCAI--CFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLE------------KHEVFQCTQ--  255 (338)
Q Consensus       192 ~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~------------~~~~~~C~~--  255 (338)
                      ..|.|++  |...|.+...+..|....|..      .|..|.+.|.+...|..|+..            |...|.|-+  
T Consensus        78 ~~~~cqvagc~~~~d~lD~~E~hY~~~h~~------sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEg  151 (253)
T KOG4173|consen   78 PAFACQVAGCCQVFDALDDYEHHYHTLHGN------SCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEG  151 (253)
T ss_pred             ccccccccchHHHHhhhhhHHHhhhhcccc------hhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHh
Confidence            4588988  889999988888887555644      799999999999999999754            445699976  


Q ss_pred             ccccccChhhHHHHhhccC
Q psy7466         256 CEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       256 C~k~f~~~~~L~~H~~~~H  274 (338)
                      |+-.|.+...-..|+..+|
T Consensus       152 Ct~KFkT~r~RkdH~I~~H  170 (253)
T KOG4173|consen  152 CTEKFKTSRDRKDHMIRMH  170 (253)
T ss_pred             hhhhhhhhhhhhhHHHHhc
Confidence            9999999999999999999

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.19  E-value=0.0087  Score=32.60  Aligned_cols=20  Identities=40%  Similarity=1.034  Sum_probs=15.4

Q ss_pred             eecccccccccChhhHHHHh
Q psy7466         251 FQCTQCEKYYRSQSTLDVHV  270 (338)
Q Consensus       251 ~~C~~C~k~f~~~~~L~~H~  270 (338)
                      |.|..|++.|.+...|..|+
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~   21 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHM   21 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCT
T ss_pred             CCcccCCCCcCCHHHHHHHH
Confidence            67788888888888887774

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=94.89  E-value=0.0065  Score=57.24  Aligned_cols=49  Identities=14%  Similarity=0.346  Sum_probs=29.0

Q ss_pred             cccchhhHhhhcChHHHHHHHH--HhcCC--Cccccc--cccccccChhhHHHHH
Q psy7466         113 LLMKALDEEMFKMDEENNKEME--RISQG--LEYQCS--VCSQVFIEKKNLSKHF  161 (338)
Q Consensus       113 ~~~C~~C~~~f~~~~~l~~H~~--~h~~~--~~~~C~--~C~~~f~~~~~L~~H~  161 (338)
                      .+.|..|...|.....|..|.+  .|.++  +++.|+  .|++.|.....+..|.
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~  343 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHI  343 (467)
T ss_pred             CCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCc
Confidence            4556666666666666666655  55555  566666  4666666666555554

>TIGR00622 ssl1 transcription factor ssl1

Probab=94.50  E-value=0.072  Score=39.75  Aligned_cols=86  Identities=17%  Similarity=0.263  Sum_probs=56.2

Q ss_pred             CcceeccccccccCChHHHHHHHhhhccCCCCCce------------ecCcCcccccChhHHHHHHHcCCCceecccccc
Q psy7466         191 RSSFKCAICFEYFSLLESLETHITRRHIGICEEPY------------QCSQCSLCFDQGSLLKAHVLEKHEVFQCTQCEK  258 (338)
Q Consensus       191 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~------------~C~~C~~~f~~~~~l~~H~~~~~~~~~C~~C~k  258 (338)
                      .-|..|++||-+..+...|.+-.  .|.-. -++|            .|--|...|........-.......|.|+.|..
T Consensus        13 ~LP~~CpiCgLtLVss~HLARSy--HHLfP-l~~f~ev~~~~~~~~~~C~~C~~~f~~~~~~~~~~~~~~~~y~C~~C~~   89 (112)
T TIGR00622        13 ELPVECPICGLTLILSTHLARSY--HHLFP-LKAFQEIPLEEYNGSRFCFGCQGPFPKPPVSPFDELKDSHRYVCAVCKN   89 (112)
T ss_pred             CCCCcCCcCCCEEeccchHHHhh--hccCC-CcccccccccccCCCCcccCcCCCCCCcccccccccccccceeCCCCCC
Confidence            45789999999998888877653  34210 1222            388888888765311110011345788888888


Q ss_pred             cccChhhHHHHhhccCCCCCCccccCCCC
Q psy7466         259 YYRSQSTLDVHVSKKHPAGTGKVKRDIKP  287 (338)
Q Consensus       259 ~f~~~~~L~~H~~~~H~~~~~~~~C~~C~  287 (338)
                      .|=..-..-.| ...|       .|+-|.
T Consensus        90 ~FC~dCD~fiH-e~Lh-------~CPGC~  110 (112)
T TIGR00622        90 VFCVDCDVFVH-ESLH-------CCPGCI  110 (112)
T ss_pred             ccccccchhhh-hhcc-------CCcCCC
Confidence            88888888888 7777       477665

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=94.39  E-value=0.025  Score=53.26  Aligned_cols=140  Identities=18%  Similarity=0.245  Sum_probs=101.4

Q ss_pred             CccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhccc--ccCCC--cceecc--ccccccCChHHHHHHH
Q psy7466         140 LEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKF--TQSGR--SSFKCA--ICFEYFSLLESLETHI  213 (338)
Q Consensus       140 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~--~h~~~--~~~~C~--~C~~~f~~~~~l~~H~  213 (338)
                      .++.|..|...|.....|..|.                        .  .|.++  +++.|+  .|++.|.....+..|.
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~------------------------~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~  343 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHL------------------------RSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHI  343 (467)
T ss_pred             cCCCCccccCCccccccccccc------------------------cccccccccCCceeeeccCCCccccccccccCCc
Confidence            4789999999999999999997                        4  68888  899999  7999999999999998


Q ss_pred             hhhccCCCCCceecCc--CcccccChhHH----HHHHHc---CCCceeccc--ccccccChhhHHHHhhccCCCCCC--c
Q psy7466         214 TRRHIGICEEPYQCSQ--CSLCFDQGSLL----KAHVLE---KHEVFQCTQ--CEKYYRSQSTLDVHVSKKHPAGTG--K  280 (338)
Q Consensus       214 ~~~H~~~~~~~~~C~~--C~~~f~~~~~l----~~H~~~---~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~~~--~  280 (338)
                       ..|.+  ..++.|..  |...+.....-    ......   ....+.|..  |-..+.....+..| ...| ....  .
T Consensus       344 -~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~  418 (467)
T COG5048         344 -LLHTS--ISPAKEKLLNSSSKFSPLLNNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLH-IITH-LSFRPYN  418 (467)
T ss_pred             -ccccC--CCccccccccCccccccccCCCCccchhhccCccCCccccccccchhhhhccccccccc-cccc-cccCCcC
Confidence             88887  56666654  44444333221    111111   233455543  77788888888888 6667 4444  5


Q ss_pred             cccCCCCCCCCCCCCcccccccCCCCCC
Q psy7466         281 VKRDIKPNTNILTVTPNRRSARNDSTKA  308 (338)
Q Consensus       281 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~  308 (338)
                      +.+..|...|.....+..|++.+.....
T Consensus       419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  446 (467)
T COG5048         419 CKNPPCSKSFNRHYNLIPHKKIHTNHAP  446 (467)
T ss_pred             CCCCcchhhccCcccccccccccccCCc
Confidence            6778899999999988888877655443

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=94.27  E-value=0.035  Score=29.59  Aligned_cols=19  Identities=32%  Similarity=0.716  Sum_probs=12.2

Q ss_pred             ccccccccccChhhHHHHHH
Q psy7466         143 QCSVCSQVFIEKKNLSKHFF  162 (338)
Q Consensus       143 ~C~~C~~~f~~~~~L~~H~~  162 (338)
                      .|+.||+.| ....|..|+.
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHH
Confidence            567777777 5556666653

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=94.23  E-value=0.019  Score=31.21  Aligned_cols=20  Identities=40%  Similarity=0.839  Sum_probs=15.3

Q ss_pred             eeccccccccCChHHHHHHH
Q psy7466         194 FKCAICFEYFSLLESLETHI  213 (338)
Q Consensus       194 ~~C~~C~~~f~~~~~l~~H~  213 (338)
                      |.|..|++.|.+...|..|+
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~   21 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHM   21 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCT
T ss_pred             CCcccCCCCcCCHHHHHHHH
Confidence            56777777777777777776

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG2482|consensus

Probab=94.19  E-value=0.12  Score=45.92  Aligned_cols=157  Identities=16%  Similarity=0.170  Sum_probs=88.8

Q ss_pred             cccccchhhHhhhc-ChHHHHHHHHHhcCC----------------------CccccccccccccChhhHHHHHHHh---
Q psy7466         111 EILLMKALDEEMFK-MDEENNKEMERISQG----------------------LEYQCSVCSQVFIEKKNLSKHFFKC---  164 (338)
Q Consensus       111 ~~~~~C~~C~~~f~-~~~~l~~H~~~h~~~----------------------~~~~C~~C~~~f~~~~~L~~H~~~h---  164 (338)
                      ....+|-.|...+. .++....|+-..++-                      ..+.|-.|.+.|..+..|+.||+.-   
T Consensus       142 ~fslqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r~~CLyCekifrdkntLkeHMrkK~Hr  221 (423)
T KOG2482|consen  142 IFSLQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLERLRCLYCEKIFRDKNTLKEHMRKKRHR  221 (423)
T ss_pred             eeeeEEEEecchhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhhheeeeeccccCCcHHHHHHHHhccCc
Confidence            44567999976554 566677776543321                      1378999999999999999999753   


Q ss_pred             --------------------hhhhhhhhhchhhhhhhhhccc--------ccCCCcc--eeccccccccCChHHHHHHHh
Q psy7466         165 --------------------LMKFTQKKKNLSKHFFKCLMKF--------TQSGRSS--FKCAICFEYFSLLESLETHIT  214 (338)
Q Consensus       165 --------------------~~~f~~~~~~l~~h~~~c~~~~--------~h~~~~~--~~C~~C~~~f~~~~~l~~H~~  214 (338)
                                          ++........+..-.+ =.+..        .-.+..+  ..|-.|.....+...|..||.
T Consensus       222 rinPknreYDkfyiINY~ev~ks~t~~~~e~dret~-~d~~E~D~~wsDw~ed~a~a~~v~CLfC~~~~en~~~l~eHmk  300 (423)
T KOG2482|consen  222 RINPKNREYDKFYIINYLEVGKSWTIVHSEDDRETN-EDINETDDTWSDWNEDDAEALSVVCLFCTNFYENPVFLFEHMK  300 (423)
T ss_pred             ccCCCccccceEEEEeHhhcCCccchhhhhhhhhhh-ccccccccchhhhhcCCCCccceEEEeeccchhhHHHHHHHHH
Confidence                                1111111000000000 00000        0001122  589899988888889999998


Q ss_pred             hhccCCCCCceecCcCcccccChhHHHHHHHcCCCceecccccccccChhhHHHHh
Q psy7466         215 RRHIGICEEPYQCSQCSLCFDQGSLLKAHVLEKHEVFQCTQCEKYYRSQSTLDVHV  270 (338)
Q Consensus       215 ~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~C~~C~k~f~~~~~L~~H~  270 (338)
                      .+|-..-.+. + ..=+.-|-..--+..=++.....-.|-.|.-.|.....|..||
T Consensus       301 ~vHe~Dl~Ki-~-sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm  354 (423)
T KOG2482|consen  301 IVHEFDLLKI-Q-SDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHM  354 (423)
T ss_pred             HHHHhhHHhh-c-cccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhc
Confidence            7785411111 0 0011122222223333333344557788889999999999994

>KOG2893|consensus

Probab=94.15  E-value=0.015  Score=48.75  Aligned_cols=49  Identities=31%  Similarity=0.617  Sum_probs=33.5

Q ss_pred             CceecCcCcccccChhHHHHHHHcCCCceecccccccccChhhHHHHhhccC
Q psy7466         223 EPYQCSQCSLCFDQGSLLKAHVLEKHEVFQCTQCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       223 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H  274 (338)
                      ++| |.+|++.|....-|..|++.  +-|+|.+|.+..-+--.|..|-+.+|
T Consensus        10 kpw-cwycnrefddekiliqhqka--khfkchichkkl~sgpglsihcmqvh   58 (341)
T KOG2893|consen   10 KPW-CWYCNREFDDEKILIQHQKA--KHFKCHICHKKLFSGPGLSIHCMQVH   58 (341)
T ss_pred             Cce-eeecccccchhhhhhhhhhh--ccceeeeehhhhccCCCceeehhhhh
Confidence            444 67777777777777777653  34777777777666667777766666

>KOG2785|consensus

Probab=94.01  E-value=0.16  Score=45.95  Aligned_cols=50  Identities=14%  Similarity=0.173  Sum_probs=40.7

Q ss_pred             cccchhhHhhhcChHHHHHHHHH--hc-----------------------------------CCCccccccccccccChh
Q psy7466         113 LLMKALDEEMFKMDEENNKEMER--IS-----------------------------------QGLEYQCSVCSQVFIEKK  155 (338)
Q Consensus       113 ~~~C~~C~~~f~~~~~l~~H~~~--h~-----------------------------------~~~~~~C~~C~~~f~~~~  155 (338)
                      .|.|.-|...|.+...-+.|+++  |.                                   ...++.|.+|.+.|.+..
T Consensus         3 ~ftC~tC~v~F~~ad~Qr~HyKSdWHRYNLKRkVA~lPPItaE~F~~k~~s~~~~~~~~~e~~~~~~~c~~c~k~~~s~~   82 (390)
T KOG2785|consen    3 GFTCNTCNVEFDDADEQRAHYKSDWHRYNLKRKVASLPPITAEEFNEKVLSDDSEKEENLEEAESVVYCEACNKSFASPK   82 (390)
T ss_pred             cceeeceeeeeccHHHHHHHhhhhHHHhhHHhHhhcCCCcCHHHHhHHHhhhhhhhhhhhhhcccceehHHhhccccChh
Confidence            47899999999998888889875  31                                   123588999999999999


Q ss_pred             hHHHHHH
Q psy7466         156 NLSKHFF  162 (338)
Q Consensus       156 ~L~~H~~  162 (338)
                      ....|+.
T Consensus        83 a~~~hl~   89 (390)
T KOG2785|consen   83 AHENHLK   89 (390)
T ss_pred             hHHHHHH
Confidence            9999984

>KOG2893|consensus

Probab=93.12  E-value=0.036  Score=46.48  Aligned_cols=50  Identities=16%  Similarity=0.169  Sum_probs=42.9

Q ss_pred             ecccccccccChhhHHHHhhccCCCCCCccccCCCCCCCCCCCCcccccccCCCCC
Q psy7466         252 QCTQCEKYYRSQSTLDVHVSKKHPAGTGKVKRDIKPNTNILTVTPNRRSARNDSTK  307 (338)
Q Consensus       252 ~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  307 (338)
                      -|=+|++.|-...-|.+|.+..|      |+|.+|.+..-+-..|..|-...|...
T Consensus        12 wcwycnrefddekiliqhqkakh------fkchichkkl~sgpglsihcmqvhket   61 (341)
T KOG2893|consen   12 WCWYCNREFDDEKILIQHQKAKH------FKCHICHKKLFSGPGLSIHCMQVHKET   61 (341)
T ss_pred             eeeecccccchhhhhhhhhhhcc------ceeeeehhhhccCCCceeehhhhhhhh
Confidence            38889999999999999977778      999999999989999988866665543

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=92.81  E-value=0.089  Score=28.02  Aligned_cols=8  Identities=38%  Similarity=0.995  Sum_probs=3.2

Q ss_pred             cCcCcccc
Q psy7466         227 CSQCSLCF  234 (338)
Q Consensus       227 C~~C~~~f  234 (338)
                      |+.||+.|
T Consensus         5 C~~CgR~F   12 (25)
T PF13913_consen    5 CPICGRKF   12 (25)
T ss_pred             CCCCCCEE
Confidence            34444444

>smart00451 ZnF_U1 U1-like zinc finger

Probab=92.49  E-value=0.092  Score=30.31  Aligned_cols=22  Identities=18%  Similarity=0.608  Sum_probs=16.4

Q ss_pred             ceecccccccccChhhHHHHhh
Q psy7466         250 VFQCTQCEKYYRSQSTLDVHVS  271 (338)
Q Consensus       250 ~~~C~~C~k~f~~~~~L~~H~~  271 (338)
                      +|.|.+|++.|.+...+..|+.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            5778888888887777777743

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=92.03  E-value=0.068  Score=33.94  Aligned_cols=28  Identities=29%  Similarity=0.623  Sum_probs=22.9

Q ss_pred             CCCceecccccccccChhhHHHHhhccC
Q psy7466         247 KHEVFQCTQCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       247 ~~~~~~C~~C~k~f~~~~~L~~H~~~~H  274 (338)
                      ++..+.|+-||..|.....+.+|+.+.|
T Consensus        14 GE~~lrCPRC~~~FR~~K~Y~RHVNKaH   41 (65)
T COG4049          14 GEEFLRCPRCGMVFRRRKDYIRHVNKAH   41 (65)
T ss_pred             CceeeeCCchhHHHHHhHHHHHHhhHHh
Confidence            5666788888888888888888887777

>KOG4167|consensus

Probab=91.87  E-value=0.14  Score=50.02  Aligned_cols=28  Identities=14%  Similarity=0.002  Sum_probs=21.9

Q ss_pred             cccccchhhHhhhcChHHHHHHHHHhcC
Q psy7466         111 EILLMKALDEEMFKMDEENNKEMERISQ  138 (338)
Q Consensus       111 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  138 (338)
                      ...|.|..|++.|.....++.||++|..
T Consensus       790 ~giFpCreC~kvF~KiKSrNAHMK~Hr~  817 (907)
T KOG4167|consen  790 TGIFPCRECGKVFFKIKSRNAHMKTHRQ  817 (907)
T ss_pred             CceeehHHHHHHHHHHhhhhHHHHHHHH
Confidence            5667888888888888888888888753

>smart00451 ZnF_U1 U1-like zinc finger

Probab=91.70  E-value=0.15  Score=29.42  Aligned_cols=21  Identities=33%  Similarity=0.632  Sum_probs=14.5

Q ss_pred             ceeccccccccCChHHHHHHH
Q psy7466         193 SFKCAICFEYFSLLESLETHI  213 (338)
Q Consensus       193 ~~~C~~C~~~f~~~~~l~~H~  213 (338)
                      +|.|.+|+..|.+...+..|+
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~   23 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHL   23 (35)
T ss_pred             CeEccccCCccCCHHHHHHHH
Confidence            466777777777777777666

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=90.72  E-value=0.15  Score=29.16  Aligned_cols=8  Identities=38%  Similarity=1.352  Sum_probs=3.5

Q ss_pred             ceecCcCc
Q psy7466         224 PYQCSQCS  231 (338)
Q Consensus       224 ~~~C~~C~  231 (338)
                      ++.|++|+
T Consensus        17 ~~~CP~Cg   24 (33)
T cd00350          17 PWVCPVCG   24 (33)
T ss_pred             CCcCcCCC
Confidence            34444444

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=90.03  E-value=0.19  Score=31.92  Aligned_cols=29  Identities=10%  Similarity=0.166  Sum_probs=20.9

Q ss_pred             ccccccccchhhHhhhcChHHHHHHHHHh
Q psy7466         108 KKDEILLMKALDEEMFKMDEENNKEMERI  136 (338)
Q Consensus       108 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h  136 (338)
                      ..++..+.|+-|+..|.....+.+|...-
T Consensus        12 RDGE~~lrCPRC~~~FR~~K~Y~RHVNKa   40 (65)
T COG4049          12 RDGEEFLRCPRCGMVFRRRKDYIRHVNKA   40 (65)
T ss_pred             cCCceeeeCCchhHHHHHhHHHHHHhhHH
Confidence            34567777888888888777777776553

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=88.56  E-value=0.69  Score=34.70  Aligned_cols=27  Identities=22%  Similarity=0.400  Sum_probs=20.5

Q ss_pred             cceeccccccccCChHHHHHHHhhhccC
Q psy7466         192 SSFKCAICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       192 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      +...|..|+..... +.+..|++..|..
T Consensus        10 ~vlIC~~C~~av~~-~~v~~HL~~~H~~   36 (109)
T PF12013_consen   10 RVLICRQCQYAVQP-SEVESHLRKRHHI   36 (109)
T ss_pred             CEEEeCCCCcccCc-hHHHHHHHHhccc
Confidence            55789999988765 7899999656643

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=88.38  E-value=0.093  Score=44.65  Aligned_cols=16  Identities=19%  Similarity=0.492  Sum_probs=7.9

Q ss_pred             CceecCcCcccccChh
Q psy7466         223 EPYQCSQCSLCFDQGS  238 (338)
Q Consensus       223 ~~~~C~~C~~~f~~~~  238 (338)
                      +.+.|++|+..|.++.
T Consensus         4 k~~~CPvC~~~F~~~~   19 (214)
T PF09986_consen    4 KKITCPVCGKEFKTKK   19 (214)
T ss_pred             CceECCCCCCeeeeeE
Confidence            3445555555555443

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=87.15  E-value=0.18  Score=42.95  Aligned_cols=46  Identities=15%  Similarity=0.320  Sum_probs=28.5

Q ss_pred             cceeccccccccCChHHHHHHHhhhccCCC-------CCc-----eecCcCcccccCh
Q psy7466         192 SSFKCAICFEYFSLLESLETHITRRHIGIC-------EEP-----YQCSQCSLCFDQG  237 (338)
Q Consensus       192 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~-------~~~-----~~C~~C~~~f~~~  237 (338)
                      +.+.|++|+..|.+........+.......       ..|     ..|+.||++|...
T Consensus         4 k~~~CPvC~~~F~~~~vrs~~~r~~~~d~D~~~~Y~~vnP~~Y~V~vCP~CgyA~~~~   61 (214)
T PF09986_consen    4 KKITCPVCGKEFKTKKVRSGKIRVIRRDSDFCPRYKGVNPLFYEVWVCPHCGYAAFEE   61 (214)
T ss_pred             CceECCCCCCeeeeeEEEcCCceEeeecCCCccccCCCCCeeeeEEECCCCCCccccc
Confidence            568999999999988655555422221110       112     4688888876644

>COG5151 SSL1 RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit SSL1 [Transcription / DNA replication, recombination, and repair]

Probab=86.03  E-value=0.43  Score=41.84  Aligned_cols=47  Identities=19%  Similarity=0.380  Sum_probs=30.8

Q ss_pred             cCcCcccccChhHHHHHHHcCCCceecccccccccChhhHHHHhhccC
Q psy7466         227 CSQCSLCFDQGSLLKAHVLEKHEVFQCTQCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       227 C~~C~~~f~~~~~l~~H~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H  274 (338)
                      |-.|.-.|.....-..-..+....|.|+.|...|-.--..-.| ...|
T Consensus       365 Cf~CQ~~fp~~~~~~~~~~~ss~rY~Ce~CK~~FC~dCdvfiH-e~Lh  411 (421)
T COG5151         365 CFVCQGPFPKPPVSPFDESTSSGRYQCELCKSTFCSDCDVFIH-ETLH  411 (421)
T ss_pred             ceeccCCCCCCCCCcccccccccceechhhhhhhhhhhHHHHH-HHHh
Confidence            7777777765432221122234568888888888888888888 7777

>KOG2186|consensus

Probab=85.18  E-value=0.53  Score=40.17  Aligned_cols=47  Identities=19%  Similarity=0.339  Sum_probs=39.9

Q ss_pred             ccccchhhHhhhcChHHHHHHHHHhcCCCccccccccccccChhhHHHHH
Q psy7466         112 ILLMKALDEEMFKMDEENNKEMERISQGLEYQCSVCSQVFIEKKNLSKHF  161 (338)
Q Consensus       112 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~  161 (338)
                      ..|.|..||..... ..+.+||-..++ ..|.|--|+..|.. ..+..|.
T Consensus         2 V~FtCnvCgEsvKK-p~vekH~srCrn-~~fSCIDC~k~F~~-~sYknH~   48 (276)
T KOG2186|consen    2 VFFTCNVCGESVKK-PQVEKHMSRCRN-AYFSCIDCGKTFER-VSYKNHT   48 (276)
T ss_pred             eEEehhhhhhhccc-cchHHHHHhccC-CeeEEeeccccccc-chhhhhh
Confidence            36899999999864 567889999888 67999999999998 6788886

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=84.98  E-value=0.45  Score=28.09  Aligned_cols=12  Identities=33%  Similarity=0.922  Sum_probs=5.5

Q ss_pred             ecccccccccCh
Q psy7466         252 QCTQCEKYYRSQ  263 (338)
Q Consensus       252 ~C~~C~k~f~~~  263 (338)
                      .|+.|+..|.-.
T Consensus         4 ~CP~C~~~~~v~   15 (38)
T TIGR02098         4 QCPNCKTSFRVV   15 (38)
T ss_pred             ECCCCCCEEEeC
Confidence            444455444433

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=84.86  E-value=0.49  Score=35.37  Aligned_cols=35  Identities=6%  Similarity=-0.013  Sum_probs=23.5

Q ss_pred             ceecccccccccChhhHHHHhhccCCCCCCccccCCCCCCCCCCCCcc
Q psy7466         250 VFQCTQCEKYYRSQSTLDVHVSKKHPAGTGKVKRDIKPNTNILTVTPN  297 (338)
Q Consensus       250 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~C~~C~~~f~~~~~l~  297 (338)
                      ...|+.||+.|...             +..|..|++||..|.-...+.
T Consensus         9 KR~Cp~CG~kFYDL-------------nk~PivCP~CG~~~~~~~~~k   43 (108)
T PF09538_consen    9 KRTCPSCGAKFYDL-------------NKDPIVCPKCGTEFPPEPPLK   43 (108)
T ss_pred             cccCCCCcchhccC-------------CCCCccCCCCCCccCcccccc
Confidence            35788888888653             225677888888887773333

The function of members of this family is unknown.

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=84.61  E-value=0.95  Score=29.40  Aligned_cols=10  Identities=20%  Similarity=0.936  Sum_probs=4.8

Q ss_pred             CCceeccccc
Q psy7466         248 HEVFQCTQCE  257 (338)
Q Consensus       248 ~~~~~C~~C~  257 (338)
                      ..+|.|+.||
T Consensus        48 g~~Y~Cp~CG   57 (61)
T COG2888          48 GNPYRCPKCG   57 (61)
T ss_pred             CCceECCCcC
Confidence            3445555554

>KOG2272|consensus

Probab=84.57  E-value=0.63  Score=39.62  Aligned_cols=133  Identities=14%  Similarity=0.225  Sum_probs=57.7

Q ss_pred             ccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceeccccccccCChHHHHHHHhhhccCC
Q psy7466         141 EYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGI  220 (338)
Q Consensus       141 ~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  220 (338)
                      -|.|++|.+...+...++.--+.-.              +.|+......+...|.|..|...... ..|.---...|.  
T Consensus        99 CF~Cd~Cn~~Lad~gf~rnqgr~LC--------------~~Cn~k~Ka~~~g~YvC~KCh~~iD~-~~l~fr~d~yH~--  161 (332)
T KOG2272|consen   99 CFRCDLCNKHLADQGFYRNQGRALC--------------RECNQKEKAKGRGRYVCQKCHAHIDE-QPLTFRGDPYHP--  161 (332)
T ss_pred             cchhHHHHHHHhhhhhHhhcchHHh--------------hhhhhhhcccccceeehhhhhhhccc-ccccccCCCCCc--
Confidence            3777777776655554443211000              11222223344456777777655443 222111111222  


Q ss_pred             CCCceecCcCcccccChhH-HHHHHH--cCCCceecccccccccChhhHHHHhhccCCCCCCccccCCCCCCCCCC
Q psy7466         221 CEEPYQCSQCSLCFDQGSL-LKAHVL--EKHEVFQCTQCEKYYRSQSTLDVHVSKKHPAGTGKVKRDIKPNTNILT  293 (338)
Q Consensus       221 ~~~~~~C~~C~~~f~~~~~-l~~H~~--~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~C~~C~~~f~~~  293 (338)
                        --|+|..|++...+..- ++.-+-  .-+..+.|++||.--.-...-..-.+..| .-..-|.|..|.+.|.--
T Consensus       162 --yHFkCt~C~keL~sdaRevk~eLyClrChD~mgipiCgaC~rpIeervi~amgKh-WHveHFvCa~CekPFlGH  234 (332)
T KOG2272|consen  162 --YHFKCTTCGKELTSDAREVKGELYCLRCHDKMGIPICGACRRPIEERVIFAMGKH-WHVEHFVCAKCEKPFLGH  234 (332)
T ss_pred             --cceecccccccccchhhhhccceeccccccccCCcccccccCchHHHHHHHhccc-cchhheeehhcCCcccch
Confidence              24778888876555431 100000  01223455555532221111111112223 333347788888777654

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=84.19  E-value=0.75  Score=34.39  Aligned_cols=32  Identities=16%  Similarity=0.497  Sum_probs=26.3

Q ss_pred             CceecCcCcccccChhHHHHHHHcCCCceecccccccccCh
Q psy7466         223 EPYQCSQCSLCFDQGSLLKAHVLEKHEVFQCTQCEKYYRSQ  263 (338)
Q Consensus       223 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~C~~C~k~f~~~  263 (338)
                      ....|+.||..|.-..         ..|..|+.||..|.-.
T Consensus         8 tKR~Cp~CG~kFYDLn---------k~PivCP~CG~~~~~~   39 (108)
T PF09538_consen    8 TKRTCPSCGAKFYDLN---------KDPIVCPKCGTEFPPE   39 (108)
T ss_pred             CcccCCCCcchhccCC---------CCCccCCCCCCccCcc
Confidence            3468999999997753         4688999999999876

The function of members of this family is unknown.

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=83.85  E-value=0.66  Score=26.73  Aligned_cols=8  Identities=25%  Similarity=0.849  Sum_probs=3.4

Q ss_pred             eecccccc
Q psy7466         194 FKCAICFE  201 (338)
Q Consensus       194 ~~C~~C~~  201 (338)
                      |.|..||.
T Consensus         3 ~~C~~CG~   10 (34)
T cd00729           3 WVCPVCGY   10 (34)
T ss_pred             EECCCCCC
Confidence            34444443

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>smart00531 TFIIE Transcription initiation factor IIE

Probab=83.82  E-value=0.77  Score=36.55  Aligned_cols=13  Identities=23%  Similarity=0.720  Sum_probs=6.5

Q ss_pred             ceecCcCcccccC
Q psy7466         224 PYQCSQCSLCFDQ  236 (338)
Q Consensus       224 ~~~C~~C~~~f~~  236 (338)
                      -|.|+.|+..|..
T Consensus        99 ~Y~Cp~C~~~y~~  111 (147)
T smart00531       99 YYKCPNCQSKYTF  111 (147)
T ss_pred             EEECcCCCCEeeH
Confidence            3555555555543

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=83.18  E-value=0.94  Score=26.46  Aligned_cols=8  Identities=25%  Similarity=0.870  Sum_probs=3.0

Q ss_pred             cccccccc
Q psy7466         196 CAICFEYF  203 (338)
Q Consensus       196 C~~C~~~f  203 (338)
                      |+.|+..|
T Consensus         5 Cp~C~~~y   12 (36)
T PF13717_consen    5 CPNCQAKY   12 (36)
T ss_pred             CCCCCCEE
Confidence            33333333

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=82.87  E-value=2.2  Score=31.92  Aligned_cols=25  Identities=32%  Similarity=0.634  Sum_probs=22.6

Q ss_pred             ceec----ccccccccChhhHHHHhhccC
Q psy7466         250 VFQC----TQCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       250 ~~~C----~~C~k~f~~~~~L~~H~~~~H  274 (338)
                      .|.|    ..|++.+.+...+..|+...|
T Consensus        80 G~~C~~~~~~C~y~~~~~~~m~~H~~~~H  108 (109)
T PF12013_consen   80 GYRCQCDPPHCGYITRSKKTMRKHWRKEH  108 (109)
T ss_pred             CeeeecCCCCCCcEeccHHHHHHHHHHhc
Confidence            4899    999999999999999987777

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=82.43  E-value=1.1  Score=27.52  Aligned_cols=27  Identities=33%  Similarity=0.591  Sum_probs=13.7

Q ss_pred             CCceecccccccccCh----hhHHHHhhccC
Q psy7466         248 HEVFQCTQCEKYYRSQ----STLDVHVSKKH  274 (338)
Q Consensus       248 ~~~~~C~~C~k~f~~~----~~L~~H~~~~H  274 (338)
                      .....|.+|++.+...    +.|..|+...|
T Consensus        14 ~~~a~C~~C~~~~~~~~~~ts~l~~HL~~~h   44 (45)
T PF02892_consen   14 KKKAKCKYCGKVIKYSSGGTSNLKRHLKKKH   44 (45)
T ss_dssp             SS-EEETTTTEE-----SSTHHHHHHHHHTT
T ss_pred             cCeEEeCCCCeEEeeCCCcHHHHHHhhhhhC
Confidence            3445666676666553    66777755555

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

>KOG2186|consensus

Probab=81.20  E-value=1.1  Score=38.39  Aligned_cols=47  Identities=26%  Similarity=0.558  Sum_probs=32.5

Q ss_pred             ceeccccccccCChHHHHHHHhhhccCCCCCceecCcCcccccChhHHHHHHH
Q psy7466         193 SFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVL  245 (338)
Q Consensus       193 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~  245 (338)
                      .|.|..||....-. .+..|+.+-+ +   .-|.|-.|+..|.. .++..|..
T Consensus         3 ~FtCnvCgEsvKKp-~vekH~srCr-n---~~fSCIDC~k~F~~-~sYknH~k   49 (276)
T KOG2186|consen    3 FFTCNVCGESVKKP-QVEKHMSRCR-N---AYFSCIDCGKTFER-VSYKNHTK   49 (276)
T ss_pred             EEehhhhhhhcccc-chHHHHHhcc-C---CeeEEeeccccccc-chhhhhhh
Confidence            37888888877654 5666873333 2   47888888888887 56777754

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=81.10  E-value=1.1  Score=26.34  Aligned_cols=32  Identities=16%  Similarity=0.464  Sum_probs=15.5

Q ss_pred             ecCcCcccccChhHHHHHHHcCCCceecccccccc
Q psy7466         226 QCSQCSLCFDQGSLLKAHVLEKHEVFQCTQCEKYY  260 (338)
Q Consensus       226 ~C~~C~~~f~~~~~l~~H~~~~~~~~~C~~C~k~f  260 (338)
                      .|+.|+..|.-..+.   +..+....+|+.|+..|
T Consensus         4 ~CP~C~~~f~v~~~~---l~~~~~~vrC~~C~~~f   35 (37)
T PF13719_consen    4 TCPNCQTRFRVPDDK---LPAGGRKVRCPKCGHVF   35 (37)
T ss_pred             ECCCCCceEEcCHHH---cccCCcEEECCCCCcEe
Confidence            455565555554421   11234455565555554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	338
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		1e-07
2ct1_A	77	Solution Structure Of The Zinc Finger Domain Of Tra		3e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 26/153 (16%)
Query: 132 EMERISQGLE-YQCSVCSQVFIEKKNLSKH--------FFKC--LMKFTQKKKNLSKHFF 180
           E +R   G + Y+C  C + F +KK+L++H         +KC    K   ++ NL  H  
Sbjct: 39  EHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAH-- 96
Query: 181 KCLMKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLL 240
               + T +G   + C  C + FS L  L  H  R H G  E+PY+C +C   F +   L
Sbjct: 97  ----QRTHTGEKPYACPECGKSFSQLAHLRAH-QRTHTG--EKPYKCPECGKSFSREDNL 149
Query: 241 ----KAHVLEKHEVFQCTQCEKYYRSQSTLDVH 269
               + H  EK   ++C +C K +  +  L+VH
Sbjct: 150 HTHQRTHTGEK--PYKCPECGKSFSRRDALNVH 180

>pdb|2CT1|A Chain A, Solution Structure Of The Zinc Finger Domain Of Transcriptional Repressor Ctcf Protein Length = 77

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 215 RRHIGICEEPYQCSQCSLCFDQGSLLKAHVLEKH----EVFQCTQCEKYYRSQSTLDVHV 270
           R H G  E+PY+C  C   F Q   +K H+L+KH      F C  C+     +S L VH+
Sbjct: 8   RTHSG--EKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHL 65
Query: 271 SKKH 274
            K+H
Sbjct: 66  RKQH 69

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	338
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	3e-10
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	5e-08
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	5e-09
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	4e-05
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-08
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	3e-08
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	4e-04
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	4e-04
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	8e-08
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-07
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-07
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	6e-07
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-04
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	4e-07
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-06
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	4e-05
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-06
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	3e-06
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-05
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	5e-06
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	8e-06
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-05
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	8e-06
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	8e-06
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	1e-05
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	1e-05
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-05
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-04
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-05
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	3e-05
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	3e-05
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	4e-04
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	4e-05
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	6e-05
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	7e-05
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	8e-05
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-04
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	5e-04
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	5e-04
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	6e-04
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	7e-04

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 55.2 bits (134), Expect = 3e-10
 Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 7/71 (9%)

Query: 208 SLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVL----EKHEVFQCTQCEKYYRSQ 263
           S  +   R H G  E+PY+C  C   F Q   +K H+L    E    F C  C+     +
Sbjct: 2   SSGSSG-RTHSG--EKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARK 58

Query: 264 STLDVHVSKKH 274
           S L VH+ K+H
Sbjct: 59  SDLGVHLRKQH 69

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 48.7 bits (117), Expect = 5e-08
 Identities = 12/55 (21%), Positives = 24/55 (43%), Gaps = 1/55 (1%)

Query: 194 FKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLEKH 248
           ++C IC   F+   +++ HI  +        + C  C     + S L  H+ ++H
Sbjct: 16  YECYICHARFTQSGTMKMHI-LQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQH 69

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 51.7 bits (125), Expect = 5e-09
 Identities = 23/81 (28%), Positives = 32/81 (39%), Gaps = 8/81 (9%)

Query: 194 FKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVL---EKHEV 250
           F+C IC   FS  + L THI R H G  E+P+ C  C   F +    K H          
Sbjct: 4   FQCRICMRNFSRSDHLTTHI-RTHTG--EKPFACDICGRKFARSDERKRHRDIQHILP-- 58

Query: 251 FQCTQCEKYYRSQSTLDVHVS 271
               + E+       L+  V+
Sbjct: 59  ILEDKVEELLSKNYHLENEVA 79

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 40.9 bits (97), Expect = 4e-05
 Identities = 17/103 (16%), Positives = 29/103 (28%), Gaps = 28/103 (27%)

Query: 142 YQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAICFE 201
           +QC +C + F    +L+ H                          T +G   F C IC  
Sbjct: 4   FQCRICMRNFSRSDHLTTH------------------------IRTHTGEKPFACDICGR 39

Query: 202 YFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHV 244
            F+  +  + H           P    +      +   L+  V
Sbjct: 40  KFARSDERKRHR-DIQH---ILPILEDKVEELLSKNYHLENEV 78

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 49.3 bits (118), Expect = 3e-08
 Identities = 17/71 (23%), Positives = 22/71 (30%), Gaps = 5/71 (7%)

Query: 222 EEPYQCSQCSLCFDQGSLLKAH-----VLEKHEVFQCTQCEKYYRSQSTLDVHVSKKHPA 276
               QC  C     Q + L  H            F C  C K +    ++  H SK HPA
Sbjct: 5   SSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPA 64

Query: 277 GTGKVKRDIKP 287
                +    P
Sbjct: 65  LLLAPQESSGP 75

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 49.4 bits (119), Expect = 3e-08
 Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 7/85 (8%)

Query: 194 FKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVL----EKHE 249
             C IC + F  +  L  H    H G  E+PY C  C L F +   +  HV        +
Sbjct: 8   VACEICGKIFRDVYHLNRH-KLSHSG--EKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGK 64

Query: 250 VFQCTQCEKYYRSQSTLDVHVSKKH 274
            + C  C K +     L+ H+ + H
Sbjct: 65  PYICQSCGKGFSRPDHLNGHIKQVH 89

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 38.2 bits (90), Expect = 4e-04
 Identities = 11/52 (21%), Positives = 16/52 (30%), Gaps = 6/52 (11%)

Query: 222 EEPYQCSQCSLCFDQGSLLKAHVL----EKHEVFQCTQCEKYYRSQSTLDVH 269
                C  C   F     L  H L    EK   + C  C   ++ +  +  H
Sbjct: 5   SSGVACEICGKIFRDVYHLNRHKLSHSGEKP--YSCPVCGLRFKRKDRMSYH 54

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 37.9 bits (89), Expect = 4e-04
 Identities = 22/102 (21%), Positives = 37/102 (36%), Gaps = 25/102 (24%)

Query: 142 YQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAICFE 201
             C +C ++F +  +L++H                        K + SG   + C +C  
Sbjct: 8   VACEICGKIFRDVYHLNRH------------------------KLSHSGEKPYSCPVCGL 43

Query: 202 YFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAH 243
            F   + +  H+ R H G   +PY C  C   F +   L  H
Sbjct: 44  RFKRKDRMSYHV-RSHDGSVGKPYICQSCGKGFSRPDHLNGH 84

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 50.9 bits (123), Expect = 8e-08
 Identities = 42/143 (29%), Positives = 65/143 (45%), Gaps = 27/143 (18%)

Query: 142 YQCSVCSQVFIEKKNLSKHF--------FKCL---MKFTQKKKNLSKHFFKCLMKFTQSG 190
           Y C  C + F    +L++H         +KC      F+  KK+L++H      + T +G
Sbjct: 22  YACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSD-KKDLTRH------QRTHTG 74

Query: 191 RSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVL----E 246
              +KC  C + FS   +L  H  R H G  E+PY C +C   F Q + L+AH      E
Sbjct: 75  EKPYKCPECGKSFSQRANLRAH-QRTHTG--EKPYACPECGKSFSQLAHLRAHQRTHTGE 131

Query: 247 KHEVFQCTQCEKYYRSQSTLDVH 269
           K   ++C +C K +  +  L  H
Sbjct: 132 KP--YKCPECGKSFSREDNLHTH 152

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 49.0 bits (118), Expect = 3e-07
 Identities = 43/143 (30%), Positives = 66/143 (46%), Gaps = 27/143 (18%)

Query: 142 YQCSVCSQVFIEKKNLSKHF--------FKCL---MKFTQKKKNLSKHFFKCLMKFTQSG 190
           Y+C  C + F +KK+L++H         +KC      F+Q + NL  H      + T +G
Sbjct: 50  YKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQ-RANLRAH------QRTHTG 102

Query: 191 RSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAH----VLE 246
              + C  C + FS L  L  H  R H G  E+PY+C +C   F +   L  H      E
Sbjct: 103 EKPYACPECGKSFSQLAHLRAH-QRTHTG--EKPYKCPECGKSFSREDNLHTHQRTHTGE 159

Query: 247 KHEVFQCTQCEKYYRSQSTLDVH 269
           K   ++C +C K +  +  L+VH
Sbjct: 160 KP--YKCPECGKSFSRRDALNVH 180

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 48.7 bits (117), Expect = 1e-07
 Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 8/86 (9%)

Query: 189 SGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAH--VLE 246
           SG S  +C  C + F     L+ H  R+H G  E+P++C +C  C+ +   L  H     
Sbjct: 3   SGSSGVECPTCHKKFLSKYYLKVH-NRKHTG--EKPFECPKCGKCYFRKENLLEHEARNC 59

Query: 247 KH---EVFQCTQCEKYYRSQSTLDVH 269
            +   +VF C+ C++ +R +  L +H
Sbjct: 60  MNRSEQVFTCSVCQETFRRRMELRLH 85

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 46.7 bits (112), Expect = 6e-07
 Identities = 32/113 (28%), Positives = 45/113 (39%), Gaps = 18/113 (15%)

Query: 142 YQCSVCSQVFIEKKNLSKHF--------FKCL---MKFTQKKKNLSKHFFKCLMKFTQSG 190
            +C  C + F+ K  L  H         F+C      + +K+ NL +H            
Sbjct: 8   VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKE-NLLEHE---ARNCMNRS 63

Query: 191 RSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAH 243
              F C++C E F     L  H    H G  E PY+CS CS  F Q   L++H
Sbjct: 64  EQVFTCSVCQETFRRRMELRLH-MVSHTG--EMPYKCSSCSQQFMQKKDLQSH 113

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 39.8 bits (94), Expect = 2e-04
 Identities = 16/57 (28%), Positives = 20/57 (35%), Gaps = 8/57 (14%)

Query: 217 HIGICEEPYQCSQCSLCFDQGSLLKAHVL----EKHEVFQCTQCEKYYRSQSTLDVH 269
             G      +C  C   F     LK H      EK   F+C +C K Y  +  L  H
Sbjct: 2   SSG--SSGVECPTCHKKFLSKYYLKVHNRKHTGEKP--FECPKCGKCYFRKENLLEH 54

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 46.3 bits (111), Expect = 4e-07
 Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 11/82 (13%)

Query: 194 FKCAI--CFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVL----EK 247
           + C +  C   FS   SL  HI R H G  ++P+QC  C   F +   L  H+     EK
Sbjct: 5   YACPVESCDRRFSQSGSLTRHI-RIHTG--QKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61

Query: 248 HEVFQCTQCEKYYRSQSTLDVH 269
              F C  C + +        H
Sbjct: 62  P--FACDICGRKFARSDERKRH 81

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 44.7 bits (107), Expect = 2e-06
 Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 9/80 (11%)

Query: 194 FKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVL----EKHE 249
            KC +C + FS  + L+TH+ R H G   +PY+C  C       S L  H+     E+  
Sbjct: 9   HKCEVCGKCFSRKDKLKTHM-RCHTG--VKPYKCKTCDYAAADSSSLNKHLRIHSDERP- 64

Query: 250 VFQCTQCEKYYRSQSTLDVH 269
            F+C  C    R+ S L VH
Sbjct: 65  -FKCQICPYASRNSSQLTVH 83

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 40.9 bits (97), Expect = 4e-05
 Identities = 23/102 (22%), Positives = 32/102 (31%), Gaps = 27/102 (26%)

Query: 142 YQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAICFE 201
           ++C VC + F  K  L  H                            +G   +KC  C  
Sbjct: 9   HKCEVCGKCFSRKDKLKTH------------------------MRCHTGVKPYKCKTCDY 44

Query: 202 YFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAH 243
             +   SL  H+ R H    E P++C  C       S L  H
Sbjct: 45  AAADSSSLNKHL-RIHSD--ERPFKCQICPYASRNSSQLTVH 83

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 46.0 bits (110), Expect = 2e-06
 Identities = 43/157 (27%), Positives = 56/157 (35%), Gaps = 38/157 (24%)

Query: 142 YQCSVCSQVFIEKKNLSKHF-----------FKC--------LMKFTQKKKNLSKHFFKC 182
            +   CSQ F  ++ L  H            F C        L  F  +   L  H    
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYM-LVVH---- 58

Query: 183 LMKFTQSGRSSFKCAI--CFEYFSLLESLETHITRRHIGICEEPYQCSQ--CSLCFDQGS 238
                 +G    KC    C + +S LE+L+TH+ R H G  E+PY C    CS  F   S
Sbjct: 59  --MRRHTGEKPHKCTFEGCRKSYSRLENLKTHL-RSHTG--EKPYMCEHEGCSKAFSNAS 113

Query: 239 LLKAHVLEKHEV---FQCT--QCEKYYRSQSTLDVHV 270
               H    H     + C    C K Y   S+L  HV
Sbjct: 114 DRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHV 150

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 43.3 bits (103), Expect = 3e-06
 Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 3/68 (4%)

Query: 184 MKFTQSGRSSFKCAICFEYFSLLESLETHI-TRRHIGICEEPYQCSQCSLCFDQGSLLKA 242
           M+FT+ G  +++C +C   ++ + +   H  T        + Y C  C   F +   + A
Sbjct: 1   MEFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRN--VKVYPCPFCFKEFTRKDNMTA 58

Query: 243 HVLEKHEV 250
           HV   H++
Sbjct: 59  HVKIIHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 15/65 (23%), Positives = 23/65 (35%), Gaps = 6/65 (9%)

Query: 215 RRHIGICEEPYQCSQCSLCFDQGSLLKAHVLEKHEV----FQCTQCEKYYRSQSTLDVHV 270
               G  E  Y+C  CS  +   S    H +  H+     + C  C K +  +  +  HV
Sbjct: 3   FTKEG--EHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHV 60

Query: 271 SKKHP 275
              H 
Sbjct: 61  KIIHK 65

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 44.1 bits (103), Expect = 5e-06
 Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 8/87 (9%)

Query: 190 GRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLEKHE 249
            +  ++C +C    S L          H  +C     C  CSL F    L + H   K E
Sbjct: 13  NKEVYQCRLCNAKLSSLLEQG-----SHERLCRNAAVCPYCSLRFFSPELKQEH-ESKCE 66

Query: 250 V--FQCTQCEKYYRSQSTLDVHVSKKH 274
                C +C + ++S  ++  H  + H
Sbjct: 67  YKKLTCLECMRTFKSSFSIWRHQVEVH 93

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 43.6 bits (102), Expect = 8e-06
 Identities = 19/90 (21%), Positives = 30/90 (33%), Gaps = 4/90 (4%)

Query: 190 GRSSFKCAICFEYFSLLESLETH--ITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLEK 247
           G S F+C  C   +  L  L  H   T  +     E    +       +   L     ++
Sbjct: 16  GASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKE 75

Query: 248 H--EVFQCTQCEKYYRSQSTLDVHVSKKHP 275
              +V +C  C   + S   L VH+ K   
Sbjct: 76  DAQKVLKCMYCGHSFESLQDLSVHMIKTKH 105

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 42.4 bits (99), Expect = 2e-05
 Identities = 18/104 (17%), Positives = 31/104 (29%), Gaps = 20/104 (19%)

Query: 129 NNKEMERISQGLE-YQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKF- 186
           + K    I  G   ++C  CS  +     L+ H     M  T   ++ +        K  
Sbjct: 6   SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVH-----MNETGHYRDDNHETDNNNPKRW 60

Query: 187 -------------TQSGRSSFKCAICFEYFSLLESLETHITRRH 217
                         +  +   KC  C   F  L+ L  H+ +  
Sbjct: 61  SKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 42.4 bits (101), Expect = 8e-06
 Identities = 27/81 (33%), Positives = 33/81 (40%), Gaps = 9/81 (11%)

Query: 193 SFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVL----EKH 248
           SF C IC + F    +L TH+   H      PY C  C   F Q S +K H      EK 
Sbjct: 1   SFDCKICGKSFKRSSTLSTHL-LIHSD--TRPYPCQYCGKRFHQKSDMKKHTFIHTGEKP 57

Query: 249 EVFQCTQCEKYYRSQSTLDVH 269
              +C  C K +   S L  H
Sbjct: 58  --HKCQVCGKAFSQSSNLITH 76

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 102

 Score = 43.2 bits (101), Expect = 8e-06
 Identities = 17/87 (19%), Positives = 28/87 (32%), Gaps = 6/87 (6%)

Query: 212 HITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLEKH------EVFQCTQCEKYYRSQST 265
           H   +     E  Y+C  C+      ++   HV  +H        + C +C    +    
Sbjct: 6   HHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDA 65

Query: 266 LDVHVSKKHPAGTGKVKRDIKPNTNIL 292
           L  H  K HP         +K N   +
Sbjct: 66  LSEHNLKYHPGEENFKLTMVKRNNQTI 92

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 42.9 bits (102), Expect = 1e-05
 Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 13/84 (15%)

Query: 194 FKCAI--CFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVL----EK 247
           ++C    C   FS  + L+ H  RRH G   +P+QC  C   F +   LK H      EK
Sbjct: 37  YQCDFKDCERRFSRSDQLKRHQ-RRHTG--VKPFQCKTCQRKFSRSDHLKTHTRTHTGEK 93

Query: 248 HEVFQC--TQCEKYYRSQSTLDVH 269
              F C    C+K +     L  H
Sbjct: 94  P--FSCRWPSCQKKFARSDELVRH 115

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 43.0 bits (100), Expect = 1e-05
 Identities = 15/51 (29%), Positives = 21/51 (41%)

Query: 224 PYQCSQCSLCFDQGSLLKAHVLEKHEVFQCTQCEKYYRSQSTLDVHVSKKH 274
            + C  C + F     LK H+        C  C+K + S  +   HV KKH
Sbjct: 74  QFVCPLCLMPFSSSVSLKQHIRYTEHTKVCPVCKKEFTSTDSALDHVCKKH 124

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 41.3 bits (98), Expect = 2e-05
 Identities = 15/64 (23%), Positives = 24/64 (37%), Gaps = 9/64 (14%)

Query: 215 RRHIGICEEPYQCSQCSLCFDQGSLLKAHVL----EKHEVFQCTQCEKYYRSQSTLDVHV 270
                    P +CS+CS      + L+ H      ++   F+C  C    +  S L  H+
Sbjct: 2   SSGSS--GHPEKCSECSYSCSSKAALRIHERIHCTDRP--FKCNYCSFDTKQPSNLSKHM 57

Query: 271 SKKH 274
            KK 
Sbjct: 58  -KKF 60

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 39.0 bits (92), Expect = 1e-04
 Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 3/50 (6%)

Query: 194 FKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAH 243
            KC+ C    S   +L  H  R H    + P++C+ CS    Q S L  H
Sbjct: 10  EKCSECSYSCSSKAALRIHE-RIHCT--DRPFKCNYCSFDTKQPSNLSKH 56

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 41.7 bits (99), Expect = 2e-05
 Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 9/68 (13%)

Query: 208 SLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHV------LEKHEVFQCTQCEKYYR 261
           S  +   R H G  E+PY CS C   F Q  LL  H             F C++C K + 
Sbjct: 2   SSGSS-GRTHTG--EKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFT 58

Query: 262 SQSTLDVH 269
            ++T+  H
Sbjct: 59  RRNTMARH 66

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 41.7 bits (99), Expect = 3e-05
 Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 9/80 (11%)

Query: 194 FKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVL----EKHE 249
           F C  C  +F+   +L  H  R H    E PY C  C   F +   L+ H      EK  
Sbjct: 18  FICKFCGRHFTKSYNLLIH-ERTHTD--ERPYTCDICHKAFRRQDHLRDHRYIHSKEKP- 73

Query: 250 VFQCTQCEKYYRSQSTLDVH 269
            F+C +C K +    TL VH
Sbjct: 74  -FKCQECGKGFCQSRTLAVH 92

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 40.5 bits (96), Expect = 3e-05
 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 3/50 (6%)

Query: 194 FKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAH 243
           F C +C   F+  E L+ H  R H    E+PY C  C+  F +  LL  H
Sbjct: 3   FVCEVCTRAFARQEHLKRHY-RSHTN--EKPYPCGLCNRAFTRRDLLIRH 49

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 37.1 bits (87), Expect = 4e-04
 Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 6/55 (10%)

Query: 224 PYQCSQCSLCFDQGSLLKAHVL----EKHEVFQCTQCEKYYRSQSTLDVHVSKKH 274
            + C  C+  F +   LK H      EK   + C  C + +  +  L  H  K H
Sbjct: 2   SFVCEVCTRAFARQEHLKRHYRSHTNEKP--YPCGLCNRAFTRRDLLIRHAQKIH 54

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 42.3 bits (100), Expect = 4e-05
 Identities = 25/111 (22%), Positives = 35/111 (31%), Gaps = 16/111 (14%)

Query: 171 KKKNLSKHFFKCLMKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIG------ICEEP 224
                 K    C  K+    + S     C   FS +  L TH+T  H+G           
Sbjct: 5   SSGQPIKQELSC--KWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62

Query: 225 YQCSQCSLCFDQGSLLKAHVL----EKHEVFQCT--QCEKYYRSQSTLDVH 269
            +C +    F     L  H+     EK   F C    C K +     L +H
Sbjct: 63  EECPREGKSFKAKYKLVNHIRVHTGEKP--FPCPFPGCGKIFARSENLKIH 111

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 41.9 bits (99), Expect = 6e-05
 Identities = 12/78 (15%), Positives = 26/78 (33%), Gaps = 11/78 (14%)

Query: 203 FSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLEKH-----------EVF 251
            S  + ++  ++ + I   +       C   F     L  HV  +H              
Sbjct: 4   GSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWE 63

Query: 252 QCTQCEKYYRSQSTLDVH 269
           +C +  K ++++  L  H
Sbjct: 64  ECPREGKSFKAKYKLVNH 81

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 41.5 bits (98), Expect = 7e-05
 Identities = 28/136 (20%), Positives = 41/136 (30%), Gaps = 28/136 (20%)

Query: 142 YQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAICFE 201
                C + F     L  H    +          + H                +C    +
Sbjct: 26  RPKKSCDRTFSTMHELVTH----VTMEHVGGPEQNNHVCYW-----------EECPREGK 70

Query: 202 YFSLLESLETHITRRHIGICEEPYQCS--QCSLCFDQGSLLKAHVL----EKHEVFQCT- 254
            F     L  HI R H G  E+P+ C    C   F +   LK H      EK   F+C  
Sbjct: 71  SFKAKYKLVNHI-RVHTG--EKPFPCPFPGCGKIFARSENLKIHKRTHTGEKP--FKCEF 125

Query: 255 -QCEKYYRSQSTLDVH 269
             C++ + + S    H
Sbjct: 126 EGCDRRFANSSDRKKH 141

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 40.5 bits (96), Expect = 8e-05
 Identities = 15/75 (20%), Positives = 29/75 (38%), Gaps = 7/75 (9%)

Query: 194 FKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLL--KAHVLEKHEVF 251
           + C +C + F +   L  H+ + H G   +PY+C+ C+  F              K   +
Sbjct: 38  YGCGVCGKKFKMKHHLVGHM-KIHTG--IKPYECNICAKRFMWRDSFHRHVTSCTKS--Y 92

Query: 252 QCTQCEKYYRSQSTL 266
           +  + E+     S  
Sbjct: 93  EAAKAEQNTTEASGP 107

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 38.6 bits (91), Expect = 2e-04
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 3/50 (6%)

Query: 194 FKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAH 243
           +KC  C   F    +L +H    H G  E+PY+C+ C   F++ + LK H
Sbjct: 18  YKCDRCQASFRYKGNLASH-KTVHTG--EKPYRCNICGAQFNRPANLKTH 64

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 37.0 bits (87), Expect = 5e-04
 Identities = 14/66 (21%), Positives = 24/66 (36%), Gaps = 9/66 (13%)

Query: 208 SLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVL----EKHEVFQCTQCEKYYRSQ 263
               H +       ++PY+C +C   F     L +H      EK   ++C  C   +   
Sbjct: 4   HHHHH-SHMTHS--DKPYKCDRCQASFRYKGNLASHKTVHTGEKP--YRCNICGAQFNRP 58

Query: 264 STLDVH 269
           + L  H
Sbjct: 59  ANLKTH 64

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 37.4 bits (88), Expect = 5e-04
 Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 9/70 (12%)

Query: 174 NLSKHFFKCLMKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLC 233
           +  +       ++ Q  R  +KC  C + FS    L  H  R H G  E+PY+C +C   
Sbjct: 5   SSGRS------EWQQRERRRYKCDECGKSFSHSSDLSKH-RRTHTG--EKPYKCDECGKA 55

Query: 234 FDQGSLLKAH 243
           F Q S L  H
Sbjct: 56  FIQRSHLIGH 65

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 37.6 bits (87), Expect = 6e-04
 Identities = 19/85 (22%), Positives = 29/85 (34%), Gaps = 14/85 (16%)

Query: 180 FKCLMKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEE-PYQC-----SQCSLC 233
             C  K+    + S     C   FS +  L TH+T  H+G  E+  + C      +    
Sbjct: 14  LSC--KWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKS 71

Query: 234 FDQGSLLKAHVL----EKHEVFQCT 254
           F     L  H+     EK      +
Sbjct: 72  FKAKYKLVNHIRVHTGEKS--GPSS 94

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 39.1 bits (92), Expect = 7e-04
 Identities = 29/127 (22%), Positives = 46/127 (36%), Gaps = 29/127 (22%)

Query: 142 YQCS--VCSQVFIEKKNLSKHF----------FKCLMK-----FTQKKKNLSKHFFKCLM 184
           + C    C   F  K N+ KHF          + C  +     F +    L  H      
Sbjct: 73  FTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHN-QLKVH------ 125

Query: 185 KFTQSGRSSFKC--AICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKA 242
           +F+ + +  ++C    C + FSL   L+ H  + H G      +   CS      +L   
Sbjct: 126 QFSHTQQLPYECPHEGCDKRFSLPSRLKRHE-KVHAG--YPCKKDDSCSFVGKTWTLYLK 182

Query: 243 HVLEKHE 249
           HV E H+
Sbjct: 183 HVAECHQ 189

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	338
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.97
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.96
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.93
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.92
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.92
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.89
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.89
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.88
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.86
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.86
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.86
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.86
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.85
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.85
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.84
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.74
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.73
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.73
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.73
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.73
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.71
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.7
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.7
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.7
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.7
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.69
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.69
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.69
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.69
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.66
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.66
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.65
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.62
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.61
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.61
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.6
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.57
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.57
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.55
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.55
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.54
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.53
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.53
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.53
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.52
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.5
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.47
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.47
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.45
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.44
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.43
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.43
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.42
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.39
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.39
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.39
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.37
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.37
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.36
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.35
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.35
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.35
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.33
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.32
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.32
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.31
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.31
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.31
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.3
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.3
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.27
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.26
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.26
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.25
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.24
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.23
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.22
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.2
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.19
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.11
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.1
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.08
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.08
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.04
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.03
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.03
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.02
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.02
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.02
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.02
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.01
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.01
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.01
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.01
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.01
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.01
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.01
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.0
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.0
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.0
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.0
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.0
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.0
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.0
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.0
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.0
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.0
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.99
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.99
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.99
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.99
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.99
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.99
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.99
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.99
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.99
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.99
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.99
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.99
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.99
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.99
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.99
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.98
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.98
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.98
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.98
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.98
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.97
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.96
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.96
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.94
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.94
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.94
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.94
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.94
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.94
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.94
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.93
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.93
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.93
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.93
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.93
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.93
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.93
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.93
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.93
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.93
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.92
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.92
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.92
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.92
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.91
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.91
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.91
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.91
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.91
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.91
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.91
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.91
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.91
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.91
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.91
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.9
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.9
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.9
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.9
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.9
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.9
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.89
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.89
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.89
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.89
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.88
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.88
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.88
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.87
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.87
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.87
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.86
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.86
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.85
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.84
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.84
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.84
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.84
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.84
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.83
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.83
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.83
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.83
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.83
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.83
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.83
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.82
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.82
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.82
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.82
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.81
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.81
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.81
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.81
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.81
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.81
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.81
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.8
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.8
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.8
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.8
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.79
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.79
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.79
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.79
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.78
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.78
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.78
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.77
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.77
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.77
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.77
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.77
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.77
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.77
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.77
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.76
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.76
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.76
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.76
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.75
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.75
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.75
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.75
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.74
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.74
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.74
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.73
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.73
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.73
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.73
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.73
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.73
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.73
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.73
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.73
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.73
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.73
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.73
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.73
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.72
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.72
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.72
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.72
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.71
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.71
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.7
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.7
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.7
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.7
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.7
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.69
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.69
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.69
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.69
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.69
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.69
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.68
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.67
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.67
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.67
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.66
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.66
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.66
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.65
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.65
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.62
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.62
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.6
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.57
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.57
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.54
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.54
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.52
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.52
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.51
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.5
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.5
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.47
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.47
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.44
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.4
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.4
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.38
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.36
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.34
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.32
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.29
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.29
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.29
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.28
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.27
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.19
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.19
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.15
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.14
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.12
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.11
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.1
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.1
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.08
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.07
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.07
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.06
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.04
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.04
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.03
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.02
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.01
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.01
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.98
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.96
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.92
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.91
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.9
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.88
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.87
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.85
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.85
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.85
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	97.84
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.82
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.81
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.81
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.81
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.81
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.8
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.8
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.8
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	97.8
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.8
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.79
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.79
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.79
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.78
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.77
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	96.95
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.73
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.72
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.72
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.72
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	96.88
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.69
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.69
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.68
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.83
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.66
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.82
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.64
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.64
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.62
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.61
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.59
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.59
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	96.74
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	96.73
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.57
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.56
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.36
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.31
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.3
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.24
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.69
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.53
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.07
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	95.51
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.14
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	94.99
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	94.83
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	93.89
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	93.56
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	92.34
2k9h_A	57	Glycoprotein; hantavirus, zinc finger, CCHC, metal	89.94
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	87.17
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	86.47
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	85.56
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	84.97
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	83.33
2k9h_A	57	Glycoprotein; hantavirus, zinc finger, CCHC, metal	82.3
4ayb_P	48	DNA-directed RNA polymerase; transferase, multi-su	80.14

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=1.7e-35  Score=247.84  Aligned_cols=171  Identities=25%  Similarity=0.444  Sum_probs=142.6

Q ss_pred             ccccccccchhhHhhhcChHHHHHHHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccc
Q psy7466         108 KKDEILLMKALDEEMFKMDEENNKEMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFT  187 (338)
Q Consensus       108 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~  187 (338)
                      ..++++|.|+.|++.|.+...|..|++.|.+.++|.|+.|++.|.+...|..|+                        ..
T Consensus        16 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~------------------------~~   71 (190)
T 2i13_A           16 EPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQ------------------------RT   71 (190)
T ss_dssp             ---------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHH------------------------HH
T ss_pred             cCCCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHH------------------------Hh
Confidence            445788999999999999999999999999999999999999999999999998                        55


Q ss_pred             cCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcCcccccChhHHHHHHHc--CCCceecccccccccChhh
Q psy7466         188 QSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLE--KHEVFQCTQCEKYYRSQST  265 (338)
Q Consensus       188 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~--~~~~~~C~~C~k~f~~~~~  265 (338)
                      |.+.++|.|++|++.|.+...|..|+ ..|.+  +++|.|+.|++.|.+...|..|+++  +.++|.|++|++.|.+...
T Consensus        72 h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~  148 (190)
T 2i13_A           72 HTGEKPYKCPECGKSFSQRANLRAHQ-RTHTG--EKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDN  148 (190)
T ss_dssp             HHCCCCEECTTTCCEESCHHHHHHHH-HHHHT--CCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHH
T ss_pred             cCCCCCccCcccCCccCCHHHHHHHH-HhcCC--CCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHH
Confidence            67788999999999999999999999 88888  8999999999999999999999987  7899999999999999999


Q ss_pred             HHHHhhccCCCCCCccccCCCCCCCCCCCCcccccccCCCCC
Q psy7466         266 LDVHVSKKHPAGTGKVKRDIKPNTNILTVTPNRRSARNDSTK  307 (338)
Q Consensus       266 L~~H~~~~H~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  307 (338)
                      |..| ++.| .++++|.|++|++.|.+...|..|++.|++..
T Consensus       149 L~~H-~~~H-~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k  188 (190)
T 2i13_A          149 LHTH-QRTH-TGEKPYKCPECGKSFSRRDALNVHQRTHTGKK  188 (190)
T ss_dssp             HHHH-HHHH-HCCCCEECTTTCCEESSHHHHHHHHTTC----
T ss_pred             HHHH-HHhc-CCCCCeECCCCCCccCCHHHHHHHHHhcCCCC
Confidence            9999 7788 89999999999999999999999999987653

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.97  E-value=1.9e-31  Score=223.05  Aligned_cols=166  Identities=20%  Similarity=0.333  Sum_probs=152.6

Q ss_pred             cccccccc--hhhHhhhcChHHHHHHHHHhcCCCcccc--ccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhc
Q psy7466         109 KDEILLMK--ALDEEMFKMDEENNKEMERISQGLEYQC--SVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLM  184 (338)
Q Consensus       109 ~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~  184 (338)
                      ...++|.|  +.|++.|.+...|..|++.|++.++|.|  +.|++.|.+...|..|+                       
T Consensus         8 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-----------------------   64 (190)
T 1tf6_A            8 VVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHS-----------------------   64 (190)
T ss_dssp             --CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHH-----------------------
T ss_pred             CCCcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHH-----------------------
Confidence            34678999  7899999999999999999999999999  88999999999999998                       


Q ss_pred             ccccCCCcceecc--ccccccCChHHHHHHHhhhc-cCCCCCceec--CcCcccccChhHHHHHHHc--CCCceeccc--
Q psy7466         185 KFTQSGRSSFKCA--ICFEYFSLLESLETHITRRH-IGICEEPYQC--SQCSLCFDQGSLLKAHVLE--KHEVFQCTQ--  255 (338)
Q Consensus       185 ~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~H-~~~~~~~~~C--~~C~~~f~~~~~l~~H~~~--~~~~~~C~~--  255 (338)
                       ..|.++++|.|.  .|++.|.+...|..|++..| .+  +++|.|  +.|++.|.+...|..|+++  +.++|.|++  
T Consensus        65 -~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~--~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~  141 (190)
T 1tf6_A           65 -LTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIK--ICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEG  141 (190)
T ss_dssp             -TTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTT--TSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSS
T ss_pred             -HHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCC--cceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCC
Confidence             788899999999  89999999999999996677 34  789999  8999999999999999988  678999988  


Q ss_pred             ccccccChhhHHHHhhccCCCCCCccccCC---CCCCCCCCCCcccccccCCC
Q psy7466         256 CEKYYRSQSTLDVHVSKKHPAGTGKVKRDI---KPNTNILTVTPNRRSARNDS  305 (338)
Q Consensus       256 C~k~f~~~~~L~~H~~~~H~~~~~~~~C~~---C~~~f~~~~~l~~H~~~~h~  305 (338)
                      |++.|.+...|..| ++.| .+   |.|..   |++.|.+...|..|++.|++
T Consensus       142 C~k~F~~~~~L~~H-~~~H-~~---~~C~~~~~C~~~f~~~~~l~~H~~~h~~  189 (190)
T 1tf6_A          142 CDKRFSLPSRLKRH-EKVH-AG---YPCKKDDSCSFVGKTWTLYLKHVAECHQ  189 (190)
T ss_dssp             CCCBCSSHHHHHHH-HTSS-CS---CCCCSTTTCCCCCSCHHHHHHHHTTCC-
T ss_pred             CCchhcCHHHHHHH-HHHh-CC---CcCCCCCcCCCccccHHHHHHHHHhhcC
Confidence            99999999999999 6788 66   99999   99999999999999999875

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.96  E-value=1.8e-29  Score=211.08  Aligned_cols=146  Identities=25%  Similarity=0.539  Sum_probs=130.2

Q ss_pred             cccccccccchhhHhhhcChHHHHHHHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhccc
Q psy7466         107 KKKDEILLMKALDEEMFKMDEENNKEMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKF  186 (338)
Q Consensus       107 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~  186 (338)
                      ...+.++|.|+.|++.|.+...|..|++.|++.++|.|++|++.|.+...|..|+                        .
T Consensus        43 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~------------------------~   98 (190)
T 2i13_A           43 THTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQ------------------------R   98 (190)
T ss_dssp             CC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHH------------------------H
T ss_pred             HcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHH------------------------H
Confidence            3456788999999999999999999999999999999999999999999999998                        5


Q ss_pred             ccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcCcccccChhHHHHHHHc--CCCceecccccccccChh
Q psy7466         187 TQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLE--KHEVFQCTQCEKYYRSQS  264 (338)
Q Consensus       187 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~--~~~~~~C~~C~k~f~~~~  264 (338)
                      .|.+.++|.|++|++.|.+...|..|+ ..|.+  +++|.|++|++.|.+...|..|+++  +.++|.|++|++.|.+..
T Consensus        99 ~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~--~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~  175 (190)
T 2i13_A           99 THTGEKPYACPECGKSFSQLAHLRAHQ-RTHTG--EKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRD  175 (190)
T ss_dssp             HHHTCCCEECTTTCCEESSHHHHHHHH-HHHHC--CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHH
T ss_pred             hcCCCCCCcCCCCCCccCCHHHHHHHH-HHhCC--CCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHH
Confidence            667788999999999999999999999 88988  8999999999999999999999988  788999999999999999


Q ss_pred             hHHHHhhccCCCCCCcc
Q psy7466         265 TLDVHVSKKHPAGTGKV  281 (338)
Q Consensus       265 ~L~~H~~~~H~~~~~~~  281 (338)
                      .|..| ++.| .+++||
T Consensus       176 ~L~~H-~~~H-~~~k~~  190 (190)
T 2i13_A          176 ALNVH-QRTH-TGKKTS  190 (190)
T ss_dssp             HHHHH-HTTC-------
T ss_pred             HHHHH-HHhc-CCCCCC
Confidence            99999 7889 888876

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.93  E-value=9.5e-27  Score=187.88  Aligned_cols=141  Identities=21%  Similarity=0.363  Sum_probs=128.0

Q ss_pred             CccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceecccc-----ccccCChHHHHHHHh
Q psy7466         140 LEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAIC-----FEYFSLLESLETHIT  214 (338)
Q Consensus       140 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C-----~~~f~~~~~l~~H~~  214 (338)
                      .+|.|+.|++.|.+...|..|++.+                     ..|.+.++|.|.+|     ++.|.+...|..|+ 
T Consensus         2 ~~~~C~~C~~~f~~~~~L~~H~~~~---------------------h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~-   59 (155)
T 2gli_A            2 TDCRWDGCSQEFDSQEQLVHHINSE---------------------HIHGERKEFVCHWGGCSRELRPFKAQYMLVVHM-   59 (155)
T ss_dssp             CBCCBTTCCCBCSCHHHHHHHHHHH---------------------TSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHT-
T ss_pred             CcCCcCCCccccCCHHHHHHHHHhh---------------------ccCCCCcceeCCCCCccchhhhhhhHHHHHHHH-
Confidence            5789999999999999999998421                     26788899998753     49999999999999 


Q ss_pred             hhccCCCCCceecCc--CcccccChhHHHHHHHc--CCCceeccc--ccccccChhhHHHHhhccCCCCCCccccCC--C
Q psy7466         215 RRHIGICEEPYQCSQ--CSLCFDQGSLLKAHVLE--KHEVFQCTQ--CEKYYRSQSTLDVHVSKKHPAGTGKVKRDI--K  286 (338)
Q Consensus       215 ~~H~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~--~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~~~~~~C~~--C  286 (338)
                      ..|.+  +++|.|++  |++.|.+...|..|+++  +.++|.|++  |++.|.+...|..|+.+.| .++++|.|+.  |
T Consensus        60 ~~h~~--~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H-~~~~~~~C~~~~C  136 (155)
T 2gli_A           60 RRHTG--EKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTH-SNEKPYVCKLPGC  136 (155)
T ss_dssp             HHHHC--CCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTT-CSCCCEECCSTTT
T ss_pred             HhcCC--CCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhc-CCCCCeeCCCCCC
Confidence            88988  89999986  99999999999999988  578999998  9999999999999966899 9999999998  9


Q ss_pred             CCCCCCCCCcccccccCCC
Q psy7466         287 PNTNILTVTPNRRSARNDS  305 (338)
Q Consensus       287 ~~~f~~~~~l~~H~~~~h~  305 (338)
                      ++.|.+...|..|++.+|+
T Consensus       137 ~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          137 TKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             CCEESSHHHHHHHHHHSCC
T ss_pred             ccccCCHHHHHHHHHhhcC
Confidence            9999999999999998875

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.92  E-value=2.4e-25  Score=179.64  Aligned_cols=136  Identities=28%  Similarity=0.469  Sum_probs=122.6

Q ss_pred             ccccchhhHhhhcChHHHHHHHH---HhcCCCccccccc-----cccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhh
Q psy7466         112 ILLMKALDEEMFKMDEENNKEME---RISQGLEYQCSVC-----SQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCL  183 (338)
Q Consensus       112 ~~~~C~~C~~~f~~~~~l~~H~~---~h~~~~~~~C~~C-----~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~  183 (338)
                      .+|.|+.|++.|.+...|..|++   .|.+.++|.|++|     ++.|.+...|..|+                      
T Consensus         2 ~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~----------------------   59 (155)
T 2gli_A            2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHM----------------------   59 (155)
T ss_dssp             CBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHT----------------------
T ss_pred             CcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHH----------------------
Confidence            57899999999999999999998   6788899998753     49999999999997                      


Q ss_pred             cccccCCCcceeccc--cccccCChHHHHHHHhhhccCCCCCceecCc--CcccccChhHHHHHH-Hc--CCCceeccc-
Q psy7466         184 MKFTQSGRSSFKCAI--CFEYFSLLESLETHITRRHIGICEEPYQCSQ--CSLCFDQGSLLKAHV-LE--KHEVFQCTQ-  255 (338)
Q Consensus       184 ~~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~--C~~~f~~~~~l~~H~-~~--~~~~~~C~~-  255 (338)
                        ..|.+.++|.|++  |++.|.+...|..|+ +.|.+  +++|.|++  |++.|.+...|..|+ ++  +.++|.|++ 
T Consensus        60 --~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~--~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~  134 (155)
T 2gli_A           60 --RRHTGEKPHKCTFEGCRKSYSRLENLKTHL-RSHTG--EKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLP  134 (155)
T ss_dssp             --HHHHCCCCCCCCSTTCCCCCSSHHHHHHHH-HHTTT--CCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCST
T ss_pred             --HhcCCCCCccCCCCCCCCcccCHHHHHHHH-HHcCC--CCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCC
Confidence              5677889999986  999999999999999 88988  89999998  999999999999998 55  678999999 


Q ss_pred             -ccccccChhhHHHHhhccC
Q psy7466         256 -CEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       256 -C~k~f~~~~~L~~H~~~~H  274 (338)
                       |++.|.+...|..|++..|
T Consensus       135 ~C~~~f~~~~~L~~H~~~hh  154 (155)
T 2gli_A          135 GCTKRYTDPSSLRKHVKTVH  154 (155)
T ss_dssp             TTCCEESSHHHHHHHHHHSC
T ss_pred             CCccccCCHHHHHHHHHhhc
Confidence             9999999999999955444

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.92  E-value=6.4e-25  Score=183.35  Aligned_cols=140  Identities=21%  Similarity=0.311  Sum_probs=128.3

Q ss_pred             cccccccccc--hhhHhhhcChHHHHHHHHHhcCCCccccc--cccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhh
Q psy7466         107 KKKDEILLMK--ALDEEMFKMDEENNKEMERISQGLEYQCS--VCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKC  182 (338)
Q Consensus       107 ~~~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c  182 (338)
                      ...+.++|.|  ..|++.|.+...|..|++.|.+.++|.|+  .|++.|.+...|..|++                    
T Consensus        36 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~--------------------   95 (190)
T 1tf6_A           36 KHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFN--------------------   95 (190)
T ss_dssp             HHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHH--------------------
T ss_pred             hcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHH--------------------
Confidence            3556789999  89999999999999999999999999999  89999999999999972                    


Q ss_pred             hccccc-CCCcceec--cccccccCChHHHHHHHhhhccCCCCCceecCc--CcccccChhHHHHHHHcCCCceeccc--
Q psy7466         183 LMKFTQ-SGRSSFKC--AICFEYFSLLESLETHITRRHIGICEEPYQCSQ--CSLCFDQGSLLKAHVLEKHEVFQCTQ--  255 (338)
Q Consensus       183 ~~~~~h-~~~~~~~C--~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~C~~--  255 (338)
                         ..| .+..+|.|  ..|++.|.+...|..|+ +.|.+  +++|.|++  |++.|.+...|..|++++.. |.|..  
T Consensus        96 ---~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~-~~H~~--~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~-~~C~~~~  168 (190)
T 1tf6_A           96 ---RFHNIKICVYVCHFENCGKAFKKHNQLKVHQ-FSHTQ--QLPYECPHEGCDKRFSLPSRLKRHEKVHAG-YPCKKDD  168 (190)
T ss_dssp             ---TTSSTTTSCCEECSSSSCEECSSHHHHHHHH-GGGSS--SCSSBCCSSSCCCBCSSHHHHHHHHTSSCS-CCCCSTT
T ss_pred             ---HhcCCCcceeeCCCCCCccccCCHHHHHHHH-HHhCC--CCCccCCCCCCCchhcCHHHHHHHHHHhCC-CcCCCCC
Confidence               455 46789999  88999999999999999 88998  89999988  99999999999999998655 99999  


Q ss_pred             -ccccccChhhHHHHhhccC
Q psy7466         256 -CEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       256 -C~k~f~~~~~L~~H~~~~H  274 (338)
                       |++.|.+...|..| ++.|
T Consensus       169 ~C~~~f~~~~~l~~H-~~~h  187 (190)
T 1tf6_A          169 SCSFVGKTWTLYLKH-VAEC  187 (190)
T ss_dssp             TCCCCCSCHHHHHHH-HTTC
T ss_pred             cCCCccccHHHHHHH-HHhh
Confidence             99999999999999 5666

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.89  E-value=3.1e-23  Score=160.58  Aligned_cols=116  Identities=24%  Similarity=0.526  Sum_probs=76.6

Q ss_pred             CCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceeccccccccCChHHHHHHHhhhc
Q psy7466         138 QGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAICFEYFSLLESLETHITRRH  217 (338)
Q Consensus       138 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H  217 (338)
                      +..+|.|++|++.|.+...|..|+                        ..|.++++|.|++|++.|.+...|..|+...|
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~------------------------~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~   59 (124)
T 2dlq_A            4 GSSGVECPTCHKKFLSKYYLKVHN------------------------RKHTGEKPFECPKCGKCYFRKENLLEHEARNC   59 (124)
T ss_dssp             CCSSCCCTTTCCCCSSHHHHHHHH------------------------HHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCC
T ss_pred             CCCCCCCCCCCCcCCCHHHHHHHH------------------------HhCCCCCCeECCCCCchhcCHHHHHHHHhhhh
Confidence            456677777777777777777776                        44556667777777777777777777763221


Q ss_pred             cCCCCCceecCcCcccccChhHHHHHHHc--CCCceecccccccccChhhHHHHhhccCCCCC
Q psy7466         218 IGICEEPYQCSQCSLCFDQGSLLKAHVLE--KHEVFQCTQCEKYYRSQSTLDVHVSKKHPAGT  278 (338)
Q Consensus       218 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~--~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  278 (338)
                      ...++++|.|++|++.|.+...|..|+++  +.++|.|++|++.|.+...|..|++..| .++
T Consensus        60 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H-~~~  121 (124)
T 2dlq_A           60 MNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH-SGP  121 (124)
T ss_dssp             CCSCCCCEECSSSCCEESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTS-SCS
T ss_pred             cCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHC-CCC
Confidence            22226677777777777777777777665  4566777777777777777777755566 443

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.89  E-value=6.3e-23  Score=158.84  Aligned_cols=114  Identities=24%  Similarity=0.421  Sum_probs=105.6

Q ss_pred             cccccccchhhHhhhcChHHHHHHHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhccccc
Q psy7466         109 KDEILLMKALDEEMFKMDEENNKEMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQ  188 (338)
Q Consensus       109 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h  188 (338)
                      .+..+|.|+.|++.|.+...|..|++.|.+.++|.|++|++.|.+...|..|+..+                     ..+
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~---------------------~~~   61 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARN---------------------CMN   61 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHC---------------------CCC
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhh---------------------hcC
Confidence            35678999999999999999999999999999999999999999999999998432                     246


Q ss_pred             CCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcCcccccChhHHHHHHHc
Q psy7466         189 SGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLE  246 (338)
Q Consensus       189 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~  246 (338)
                      .+..+|.|++|++.|.+...|..|+ ..|.+  +++|.|++|++.|.+...|..|++.
T Consensus        62 ~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~  116 (124)
T 2dlq_A           62 RSEQVFTCSVCQETFRRRMELRLHM-VSHTG--EMPYKCSSCSQQFMQKKDLQSHMIK  116 (124)
T ss_dssp             SCCCCEECSSSCCEESSHHHHHHHH-HHHSS--SCSEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCCCCeECCCCCCccCCHHHHHHHH-HHcCC--CCCccCCCccchhCCHHHHHHHHHH
Confidence            7889999999999999999999999 88988  8999999999999999999999985

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.88  E-value=4.4e-23  Score=161.63  Aligned_cols=106  Identities=21%  Similarity=0.410  Sum_probs=95.7

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcCcccccChhHHHHHHHc--CCCceecccccccccC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLE--KHEVFQCTQCEKYYRS  262 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~--~~~~~~C~~C~k~f~~  262 (338)
                      ..+|.|+++|.|++||+.|.+...|..|+ +.|.+  ++||.|++|++.|.+...|..|+++  ++++|.|++||+.|.+
T Consensus        14 ~~~h~Gek~y~C~~C~k~F~~~~~L~~H~-~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~   90 (133)
T 2lt7_A           14 ELIVDGRVYYICIVCKRSYVCLTSLRRHF-NIHSW--EKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFIN   90 (133)
T ss_dssp             EEEETTEEEEEETTTCCEESCHHHHHHHH-HHHHC--CSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESS
T ss_pred             eeecCCCcCeECCCCCCCcCCHHHHHHHH-HHcCC--CCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCC
Confidence            37889999999999999999999999999 88998  8999999999999999999999987  7899999999999999


Q ss_pred             hhhHHHHhhccCCC----CCCccccCCCCCCCCCC
Q psy7466         263 QSTLDVHVSKKHPA----GTGKVKRDIKPNTNILT  293 (338)
Q Consensus       263 ~~~L~~H~~~~H~~----~~~~~~C~~C~~~f~~~  293 (338)
                      ...|..|++..|..    ..++|.|..|++.|...
T Consensus        91 ~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           91 YQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             HHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCC
T ss_pred             HHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhhc
Confidence            99999997666621    23679999999988654

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.86  E-value=2.6e-22  Score=154.24  Aligned_cols=109  Identities=26%  Similarity=0.457  Sum_probs=66.6

Q ss_pred             cccccchh--hHhhhcChHHHHHHHHHhcCCCccccc--cccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhccc
Q psy7466         111 EILLMKAL--DEEMFKMDEENNKEMERISQGLEYQCS--VCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKF  186 (338)
Q Consensus       111 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~  186 (338)
                      +++|.|.+  |++.|.+...|..|++.|.+.++|.|+  .|++.|.+...|..|+                        .
T Consensus         4 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~------------------------~   59 (119)
T 2jp9_A            4 KRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQ------------------------R   59 (119)
T ss_dssp             SCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHH------------------------H
T ss_pred             CeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHH------------------------H
Confidence            45566665  666666666666666666666666666  4666666666666665                        3


Q ss_pred             ccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceec--CcCcccccChhHHHHHHHc
Q psy7466         187 TQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQC--SQCSLCFDQGSLLKAHVLE  246 (338)
Q Consensus       187 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C--~~C~~~f~~~~~l~~H~~~  246 (338)
                      .|.+.++|.|.+|++.|.+...|..|+ ..|.+  +++|.|  +.|++.|.+...|..|+++
T Consensus        60 ~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~--~~~~~C~~~~C~~~f~~~~~L~~H~~~  118 (119)
T 2jp9_A           60 RHTGVKPFQCKTCQRKFSRSDHLKTHT-RTHTG--EKPFSCRWPSCQKKFARSDELVRHHNM  118 (119)
T ss_dssp             HHHCCCCEECTTTCCEESCHHHHHHHH-HHHHT--CCCEECCSTTCCCEESSHHHHHHHHHT
T ss_pred             HcCCCCCccCCccCchhCCHHHHHHHH-HHhcC--CCCeeCCCCCCccccCCHHHHHHHHhc
Confidence            344555666666666666666666666 55555  556666  5566666666666666543

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.86  E-value=5.3e-22  Score=160.01  Aligned_cols=119  Identities=24%  Similarity=0.408  Sum_probs=103.8

Q ss_pred             CCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcc--------eeccccccccCChHHH
Q psy7466         138 QGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSS--------FKCAICFEYFSLLESL  209 (338)
Q Consensus       138 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~--------~~C~~C~~~f~~~~~l  209 (338)
                      ...+|.|..|++.|.+...|..|+++                       .|.+..+        |.|.+|++.|.+...|
T Consensus        22 ~~~~~~C~~C~~~f~~~~~L~~H~~~-----------------------~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l   78 (155)
T 2rpc_A           22 AQLSRPKKSCDRTFSTMHELVTHVTM-----------------------EHVGGPEQNNHVCYWEECPREGKSFKAKYKL   78 (155)
T ss_dssp             TCCSSSCCCCCCCBSSHHHHHHHHHT-----------------------TTSCCTTCSSCCCCBTTCTTSSCCCSSHHHH
T ss_pred             hhcccccccCCcccCCHHHHHHHHHh-----------------------hcCCCcccCCccccccCCCCcccccCCHHHH
Confidence            45678999999999999999999843                       2444332        8899999999999999


Q ss_pred             HHHHhhhccCCCCCceecCc--CcccccChhHHHHHHHc--CCCceeccc--ccccccChhhHHHHhhccCCCCCCcccc
Q psy7466         210 ETHITRRHIGICEEPYQCSQ--CSLCFDQGSLLKAHVLE--KHEVFQCTQ--CEKYYRSQSTLDVHVSKKHPAGTGKVKR  283 (338)
Q Consensus       210 ~~H~~~~H~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~--~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~~~~~~C  283 (338)
                      ..|+ ..|.+  +++|.|.+  |++.|.+...|..|+++  +.++|.|.+  |++.|.+...|..| ++.| .++++|.|
T Consensus        79 ~~H~-~~h~~--~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H-~~~H-~~~k~~~c  153 (155)
T 2rpc_A           79 VNHI-RVHTG--EKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKH-MHVH-TSDKSGPS  153 (155)
T ss_dssp             HHHT-HHHHC--CCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHS-STTT-TSCCCSCS
T ss_pred             HHHH-HhcCC--CCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHH-HHHh-cCCCCCCC
Confidence            9999 78888  89999998  99999999999999987  567899997  99999999999999 7789 89999988


Q ss_pred             C
Q psy7466         284 D  284 (338)
Q Consensus       284 ~  284 (338)
                      .
T Consensus       154 ~  154 (155)
T 2rpc_A          154 S  154 (155)
T ss_dssp             C
T ss_pred             C
Confidence            5

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.86  E-value=6e-22  Score=152.20  Aligned_cols=110  Identities=28%  Similarity=0.623  Sum_probs=83.0

Q ss_pred             cCCCcccccc--ccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceecc--ccccccCChHHHHHH
Q psy7466         137 SQGLEYQCSV--CSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCA--ICFEYFSLLESLETH  212 (338)
Q Consensus       137 ~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~--~C~~~f~~~~~l~~H  212 (338)
                      +++++|.|.+  |++.|.+...|..|+                        ..|.+.++|.|+  .|++.|.+...|..|
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~------------------------~~h~~~~~~~C~~~~C~~~f~~~~~l~~H   57 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHS------------------------RKHTGEKPYQCDFKDCERRFSRSDQLKRH   57 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHH------------------------HHHHTTCCEECCSTTCCCEESSHHHHHHH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHH------------------------HhhCCCCCccCCCCCCcCccCCHHHHHHH
Confidence            3566788876  888888888888886                        445566778887  588888888888888


Q ss_pred             HhhhccCCCCCceecCcCcccccChhHHHHHHHc--CCCceec--ccccccccChhhHHHHhhccC
Q psy7466         213 ITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLE--KHEVFQC--TQCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       213 ~~~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~--~~~~~~C--~~C~k~f~~~~~L~~H~~~~H  274 (338)
                      + ..|.+  +++|.|++|++.|.+...|..|+++  +.++|.|  +.|++.|.+...|..| ++.|
T Consensus        58 ~-~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H-~~~H  119 (119)
T 2jp9_A           58 Q-RRHTG--VKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRH-HNMH  119 (119)
T ss_dssp             H-HHHHC--CCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHH-HHTC
T ss_pred             H-HHcCC--CCCccCCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHH-HhcC
Confidence            7 66776  6778888888888888888888776  5677888  6788888888888888 5544

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.86  E-value=2.7e-22  Score=157.11  Aligned_cols=82  Identities=17%  Similarity=0.335  Sum_probs=55.4

Q ss_pred             ccccccccchhhHhhhcChHHHHHHHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccc
Q psy7466         108 KKDEILLMKALDEEMFKMDEENNKEMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFT  187 (338)
Q Consensus       108 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~  187 (338)
                      ..|+++|.|++|++.|.+...|..|+++|++++||.|++|++.|.+...|..|+                        .+
T Consensus        17 h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~------------------------~~   72 (133)
T 2lt7_A           17 VDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHE------------------------IH   72 (133)
T ss_dssp             ETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHH------------------------HH
T ss_pred             cCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhc------------------------cc
Confidence            445666667777777766666777766666666677777777776666666665                        44


Q ss_pred             cCCCcceeccccccccCChHHHHHHH
Q psy7466         188 QSGRSSFKCAICFEYFSLLESLETHI  213 (338)
Q Consensus       188 h~~~~~~~C~~C~~~f~~~~~l~~H~  213 (338)
                      |++++||.|++||+.|.+...|..|+
T Consensus        73 H~~~k~~~C~~C~k~F~~~~~L~~H~   98 (133)
T 2lt7_A           73 HTGERRYQCLACGKSFINYQFMSSHI   98 (133)
T ss_dssp             HHTCCCEEESSSCCEESSHHHHHHHH
T ss_pred             cCCCccccCCCCCCCcCCHHHHHHHh
Confidence            55666666666666666666666666

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.85  E-value=8.5e-22  Score=152.59  Aligned_cols=107  Identities=22%  Similarity=0.371  Sum_probs=51.0

Q ss_pred             ceecc--ccccccCChHHHHHHHhhhccCCCCCceecCcCcccccChhHHHHHHHc--CCCceeccc--ccccccChhhH
Q psy7466         193 SFKCA--ICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLE--KHEVFQCTQ--CEKYYRSQSTL  266 (338)
Q Consensus       193 ~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~--~~~~~~C~~--C~k~f~~~~~L  266 (338)
                      +|.|+  .|++.|.+...|..|+ ..| +  +++|.|.+|++.|.+...|..|+++  +.++|.|.+  |++.|.+...|
T Consensus         5 ~~~C~~~~C~~~f~~~~~l~~H~-~~h-~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l   80 (124)
T 1ubd_C            5 TIACPHKGCTKMFRDNSAMRKHL-HTH-G--PRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNL   80 (124)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHH-GGG-S--CCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHH
T ss_pred             cccCCCCCCcCccCCHHHHHHHH-HHc-C--CCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHH
Confidence            44444  4555554444455554 344 2  3445555555555555455555444  234455543  55555555555


Q ss_pred             HHHhhccCCCCCCccccC--CCCCCCCCCCCcccccccCCC
Q psy7466         267 DVHVSKKHPAGTGKVKRD--IKPNTNILTVTPNRRSARNDS  305 (338)
Q Consensus       267 ~~H~~~~H~~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~  305 (338)
                      ..| ++.| .++++|.|+  .|++.|.+...|..|++.|++
T Consensus        81 ~~H-~~~h-~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~  119 (124)
T 1ubd_C           81 RTH-VRIH-TGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK  119 (124)
T ss_dssp             HHH-HHHH-HCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-
T ss_pred             HHH-HHHh-CCCCceECCCCCCCCccCCHHHHHHHHHHHcc
Confidence            555 3444 444555553  255555555555555544443

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.85  E-value=9.2e-22  Score=152.40  Aligned_cols=106  Identities=28%  Similarity=0.522  Sum_probs=89.2

Q ss_pred             hhhhhhhhhhchhhhhhhhhcccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCc--CcccccChhHHH
Q psy7466         164 CLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQ--CSLCFDQGSLLK  241 (338)
Q Consensus       164 h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~--C~~~f~~~~~l~  241 (338)
                      ++..|... ..|..|+      ..| +.++|.|.+|++.|.+...|..|+ ..|.+  +++|.|.+  |++.|.+...|.
T Consensus        13 C~~~f~~~-~~l~~H~------~~h-~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~--~~~~~C~~~~C~~~f~~~~~l~   81 (124)
T 1ubd_C           13 CTKMFRDN-SAMRKHL------HTH-GPRVHVCAECGKAFVESSKLKRHQ-LVHTG--EKPFQCTFEGCGKRFSLDFNLR   81 (124)
T ss_dssp             CCCEESSH-HHHHHHH------GGG-SCCCEECTTTCCEESSHHHHHHHG-GGTSC--CCCEECCSTTCCCEESCHHHHH
T ss_pred             CcCccCCH-HHHHHHH------HHc-CCCCeECCCCCchhCCHHHHHHHH-HHcCC--CCCeeCCCCCCcCccCCHHHHH
Confidence            34556555 7888887      777 889999999999999999999999 88988  89999986  999999999999


Q ss_pred             HHHHc--CCCceecc--cccccccChhhHHHHhhccCCCCCCccc
Q psy7466         242 AHVLE--KHEVFQCT--QCEKYYRSQSTLDVHVSKKHPAGTGKVK  282 (338)
Q Consensus       242 ~H~~~--~~~~~~C~--~C~k~f~~~~~L~~H~~~~H~~~~~~~~  282 (338)
                      .|+++  +.++|.|+  .|++.|.+...|..| ++.| .++++++
T Consensus        82 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H-~~~H-~~~k~~q  124 (124)
T 1ubd_C           82 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSH-ILTH-AKAKNNQ  124 (124)
T ss_dssp             HHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHH-HHHH-C------
T ss_pred             HHHHHhCCCCceECCCCCCCCccCCHHHHHHH-HHHH-cccccCC
Confidence            99987  78899996  599999999999999 7778 7777653

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.84  E-value=1.8e-21  Score=156.89  Aligned_cols=118  Identities=25%  Similarity=0.390  Sum_probs=107.8

Q ss_pred             ccccccchhhHhhhcChHHHHHHHHH-hcCCCc--------cccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhh
Q psy7466         110 DEILLMKALDEEMFKMDEENNKEMER-ISQGLE--------YQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFF  180 (338)
Q Consensus       110 ~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~  180 (338)
                      ....|.|..|++.|.+...|..|++. |.+..+        |.|.+|++.|.+...|..|+                   
T Consensus        22 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~-------------------   82 (155)
T 2rpc_A           22 AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHI-------------------   82 (155)
T ss_dssp             TCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHT-------------------
T ss_pred             hhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHH-------------------
Confidence            46789999999999999999999998 666554        89999999999999999998                   


Q ss_pred             hhhcccccCCCcceeccc--cccccCChHHHHHHHhhhccCCCCCceecCc--CcccccChhHHHHHHHc--CCCceecc
Q psy7466         181 KCLMKFTQSGRSSFKCAI--CFEYFSLLESLETHITRRHIGICEEPYQCSQ--CSLCFDQGSLLKAHVLE--KHEVFQCT  254 (338)
Q Consensus       181 ~c~~~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~--~~~~~~C~  254 (338)
                           ..|.+.++|.|.+  |++.|.+...|..|+ +.|.+  +++|.|.+  |++.|.+...|..|+++  ++++|.|.
T Consensus        83 -----~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~-~~h~~--~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A           83 -----RVHTGEKPFPCPFPGCGKIFARSENLKIHK-RTHTG--EKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             -----HHHHCCCSEECSCTTTCCEESCHHHHHHHH-TTTCS--SCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             -----HhcCCCCcccCCcCCCCCccCCHHHHHHHH-HhhCC--CCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence                 5677889999998  999999999999999 88988  89999997  99999999999999987  67899885

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.74  E-value=2.5e-18  Score=129.16  Aligned_cols=92  Identities=18%  Similarity=0.316  Sum_probs=83.8

Q ss_pred             cccccccchhhHhhhcChHHHHHHHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhccccc
Q psy7466         109 KDEILLMKALDEEMFKMDEENNKEMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQ  188 (338)
Q Consensus       109 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h  188 (338)
                      ..+++|.|..|++.|.+...|..|++.|++.++|.|.+|++.|.+...|..|+                        ..|
T Consensus        13 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~------------------------~~h   68 (106)
T 2ee8_A           13 KTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHR------------------------YIH   68 (106)
T ss_dssp             CCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHG------------------------GGS
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHH------------------------HHh
Confidence            34678999999999999999999999999999999999999999999999997                        678


Q ss_pred             CCCcceeccccccccCChHHHHHHHhhhccCCCCCceec
Q psy7466         189 SGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQC  227 (338)
Q Consensus       189 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C  227 (338)
                      .++++|.|.+|++.|.+...|..|+ +.|.+  +++|.+
T Consensus        69 ~~~~~~~C~~C~~~f~~~~~L~~H~-~~H~~--~~~~~~  104 (106)
T 2ee8_A           69 SKEKPFKCQECGKGFCQSRTLAVHK-TLHMQ--TSSPTA  104 (106)
T ss_dssp             CCCCTTSCSSSCCCCSSHHHHHHHH-HHTTS--CCCCCC
T ss_pred             CCCCCeECCCcCCcccCHHHHHHHH-HHhCC--CCCCcC
Confidence            8889999999999999999999999 88988  788764

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.73  E-value=7.1e-18  Score=126.63  Aligned_cols=92  Identities=29%  Similarity=0.542  Sum_probs=82.8

Q ss_pred             ccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcCcccccChhHHHHHHHc--CCCceecccccccccChh
Q psy7466         187 TQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLE--KHEVFQCTQCEKYYRSQS  264 (338)
Q Consensus       187 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~--~~~~~~C~~C~k~f~~~~  264 (338)
                      .....++|.|.+|++.|.+...|..|+ ..|.+  +++|.|.+|++.|.....|..|+++  +.++|.|.+|++.|.+..
T Consensus        11 ~~~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~   87 (106)
T 2ee8_A           11 PSKTKKEFICKFCGRHFTKSYNLLIHE-RTHTD--ERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSR   87 (106)
T ss_dssp             CCCCCCCCBCSSSCCBCSSHHHHHHHH-HHHCC--SCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHH
T ss_pred             CcCCCcCeECCCCCCccCCHHHHHHHH-HHcCC--CCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHH
Confidence            345678899999999999999999999 88888  8999999999999999999999888  567899999999999999


Q ss_pred             hHHHHhhccCCCCCCcccc
Q psy7466         265 TLDVHVSKKHPAGTGKVKR  283 (338)
Q Consensus       265 ~L~~H~~~~H~~~~~~~~C  283 (338)
                      .|..| ++.| .++++|.+
T Consensus        88 ~L~~H-~~~H-~~~~~~~~  104 (106)
T 2ee8_A           88 TLAVH-KTLH-MQTSSPTA  104 (106)
T ss_dssp             HHHHH-HHHT-TSCCCCCC
T ss_pred             HHHHH-HHHh-CCCCCCcC
Confidence            99999 7889 88888864

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.73  E-value=1.1e-17  Score=123.24  Aligned_cols=88  Identities=32%  Similarity=0.637  Sum_probs=75.8

Q ss_pred             cCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcCcccccChhHHHHHHHc--CCCceecccccccccChhh
Q psy7466         188 QSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLE--KHEVFQCTQCEKYYRSQST  265 (338)
Q Consensus       188 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~--~~~~~~C~~C~k~f~~~~~  265 (338)
                      +.+.++|.|.+|++.|.+...|..|+ ..|.+  +++|.|.+|++.|.....|..|+++  +.++|.|++|++.|.+...
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   79 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHM-RCHTG--VKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQ   79 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHG-GGCCC--CCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHH
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHH-HhcCC--CCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHH
Confidence            45678899999999999999999998 78887  7899999999999999999999887  5678999999999999999


Q ss_pred             HHHHhhccCCCCCCc
Q psy7466         266 LDVHVSKKHPAGTGK  280 (338)
Q Consensus       266 L~~H~~~~H~~~~~~  280 (338)
                      |..| ++.| .++++
T Consensus        80 l~~H-~~~h-~~~~~   92 (96)
T 2dmd_A           80 LTVH-LRSH-TGDSG   92 (96)
T ss_dssp             HHHH-HTTC-CSCCC
T ss_pred             HHHH-HHHh-cCCCC
Confidence            9999 6677 55543

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.73  E-value=3.9e-18  Score=128.41  Aligned_cols=93  Identities=19%  Similarity=0.342  Sum_probs=84.2

Q ss_pred             cccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcCcccccChhHHHHHHHc-CCCceecccccccccChh
Q psy7466         186 FTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLE-KHEVFQCTQCEKYYRSQS  264 (338)
Q Consensus       186 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~-~~~~~~C~~C~k~f~~~~  264 (338)
                      ..|.++++|.|.+|++.|.+...|..|+ ..|.    ++|.|.+|++.|.....|..|+.- +.++|.|.+|++.|.+..
T Consensus         9 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~H~----~~~~C~~C~~~f~~~~~l~~H~~H~~~~~~~C~~C~~~f~~~~   83 (107)
T 1wjp_A            9 SPVENKEVYQCRLCNAKLSSLLEQGSHE-RLCR----NAAVCPYCSLRFFSPELKQEHESKCEYKKLTCLECMRTFKSSF   83 (107)
T ss_dssp             CCCCCCCCCBCTTTCCBCSSHHHHHHHH-HHHH----HSBCCTTTCCCBSSHHHHHHHHHHCSTGGGEEGGGTEECSSHH
T ss_pred             cccCCCcCeECCCCCCccCCHHHHHHHH-HHCC----CCccCCCCCCccCCHHHHHHHHHcCCCCCccCccccchhCCHH
Confidence            6788999999999999999999999999 7783    589999999999999999999853 678999999999999999


Q ss_pred             hHHHHhhccCCCCCCccccC
Q psy7466         265 TLDVHVSKKHPAGTGKVKRD  284 (338)
Q Consensus       265 ~L~~H~~~~H~~~~~~~~C~  284 (338)
                      .|..|++..| .++++|.|.
T Consensus        84 ~L~~H~~~~H-~~~~~~~~~  102 (107)
T 1wjp_A           84 SIWRHQVEVH-NQNNMAPTS  102 (107)
T ss_dssp             HHHHHHHHTS-CCCCCCCCC
T ss_pred             HHHHHHHHHc-CCCCCCCCC
Confidence            9999965699 999999875

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.73  E-value=1.1e-17  Score=122.85  Aligned_cols=86  Identities=31%  Similarity=0.636  Sum_probs=76.7

Q ss_pred             CCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcCcccccChhHHHHHHHc--CC--CceecccccccccChh
Q psy7466         189 SGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLE--KH--EVFQCTQCEKYYRSQS  264 (338)
Q Consensus       189 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~--~~--~~~~C~~C~k~f~~~~  264 (338)
                      .+.++|.|.+|++.|.+...|..|+ ..|.+  +++|.|.+|++.|.+...|..|+++  +.  ++|.|++|++.|.+..
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~   79 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHK-LSHSG--EKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPD   79 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHH-HHSCS--SCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHH-HhcCC--CCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHH
Confidence            5678899999999999999999999 78888  8899999999999999999999887  33  7899999999999999


Q ss_pred             hHHHHhhccCCCCC
Q psy7466         265 TLDVHVSKKHPAGT  278 (338)
Q Consensus       265 ~L~~H~~~~H~~~~  278 (338)
                      .|..|++..| .++
T Consensus        80 ~L~~H~~~~H-~~~   92 (95)
T 2yt9_A           80 HLNGHIKQVH-SGP   92 (95)
T ss_dssp             HHHHHHHHTS-CCC
T ss_pred             HHHHHHHHhc-CCC
Confidence            9999977789 554

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.71  E-value=8.7e-18  Score=123.72  Aligned_cols=85  Identities=22%  Similarity=0.343  Sum_probs=59.0

Q ss_pred             ccccccchhhHhhhcChHHHHHHHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccC
Q psy7466         110 DEILLMKALDEEMFKMDEENNKEMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQS  189 (338)
Q Consensus       110 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~  189 (338)
                      ++++|.|..|++.|.+...|..|++.|++.++|.|++|++.|.+...|..|+                        ..|.
T Consensus         5 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~------------------------~~h~   60 (96)
T 2dmd_A            5 SSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHL------------------------RIHS   60 (96)
T ss_dssp             CCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHH------------------------HHSC
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHH------------------------HHhC
Confidence            4556777777777777777777777777777777777777777777777776                        4556


Q ss_pred             CCcceeccccccccCChHHHHHHHhhhccC
Q psy7466         190 GRSSFKCAICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       190 ~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      ++++|.|.+|++.|.+...|..|+ +.|.+
T Consensus        61 ~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~   89 (96)
T 2dmd_A           61 DERPFKCQICPYASRNSSQLTVHL-RSHTG   89 (96)
T ss_dssp             CCCCEECSSSSCEESSHHHHHHHH-TTCCS
T ss_pred             CCCCccCCCCCCccCCHHHHHHHH-HHhcC
Confidence            666677777777777777777776 56655

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.70  E-value=9e-19  Score=133.64  Aligned_cols=86  Identities=21%  Similarity=0.366  Sum_probs=59.9

Q ss_pred             cccCCCcceeccccccccCChHHHHHHHhhh--ccCCCCCce-ecCcCcccc--cChhHHHHHHHc--CCCceecccccc
Q psy7466         186 FTQSGRSSFKCAICFEYFSLLESLETHITRR--HIGICEEPY-QCSQCSLCF--DQGSLLKAHVLE--KHEVFQCTQCEK  258 (338)
Q Consensus       186 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~--H~~~~~~~~-~C~~C~~~f--~~~~~l~~H~~~--~~~~~~C~~C~k  258 (338)
                      ..|.++++|.|.+|++.|.+...|..|+ +.  |.+  .+++ .|.+|++.|  .....|..|+++  ++++|.|++|++
T Consensus        12 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~~~h~~--~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k   88 (115)
T 2dmi_A           12 SIFTGASKFRCKDCSAAYDTLVELTVHM-NETGHYR--DDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGH   88 (115)
T ss_dssp             CCCCCCCSEEBSSSSCEESSHHHHHHHH-HHTCCCB--CSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCC
T ss_pred             eeeCCCCCEECCccCchhcCHHHHHHHH-HHhCccc--cCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCCCCC
Confidence            6777777777777777777777777777 44  444  4444 377777777  677777777665  466777777777


Q ss_pred             cccChhhHHHHhhccC
Q psy7466         259 YYRSQSTLDVHVSKKH  274 (338)
Q Consensus       259 ~f~~~~~L~~H~~~~H  274 (338)
                      .|.+...|..|++..|
T Consensus        89 ~f~~~~~L~~H~~~hh  104 (115)
T 2dmi_A           89 SFESLQDLSVHMIKTK  104 (115)
T ss_dssp             BCSSHHHHHHHHHHTT
T ss_pred             ccCCHHHHHHHHHHhC
Confidence            7777777777744434

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.70  E-value=2.1e-17  Score=120.05  Aligned_cols=85  Identities=28%  Similarity=0.567  Sum_probs=72.5

Q ss_pred             CCcceecc--ccccccCChHHHHHHHhhhccCCCCCceecCcCcccccChhHHHHHHHc--CCCceecccccccccChhh
Q psy7466         190 GRSSFKCA--ICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLE--KHEVFQCTQCEKYYRSQST  265 (338)
Q Consensus       190 ~~~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~--~~~~~~C~~C~k~f~~~~~  265 (338)
                      ++++|.|+  .|++.|.+...|..|+ ..|.+  +++|.|..|++.|.+...|..|+++  +.++|.|++|++.|.+...
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~-~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   77 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHI-RIHTG--QKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDE   77 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHH-HHHHC--CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHH
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHH-HHhCC--CCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHH
Confidence            35789998  5999999999999998 78887  7899999999999999999999887  7788999999999999999


Q ss_pred             HHHHhhccCCCCCC
Q psy7466         266 LDVHVSKKHPAGTG  279 (338)
Q Consensus       266 L~~H~~~~H~~~~~  279 (338)
                      |..| ++.| .+++
T Consensus        78 l~~H-~~~H-~~~k   89 (90)
T 1a1h_A           78 RKRH-TKIH-LRQK   89 (90)
T ss_dssp             HHHH-HGGG-GC--
T ss_pred             HHHH-HHHh-cccC
Confidence            9999 6777 5553

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.70  E-value=8.2e-18  Score=119.96  Aligned_cols=79  Identities=28%  Similarity=0.488  Sum_probs=44.9

Q ss_pred             ccchhhHhhhcChHHHHHHHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcc
Q psy7466         114 LMKALDEEMFKMDEENNKEMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSS  193 (338)
Q Consensus       114 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~  193 (338)
                      |.|..|++.|.+...|..|++.|.+.++|.|+.|++.|.+...|..|+                        ..|.++++
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~------------------------~~h~~~~~   57 (82)
T 2kmk_A            2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHT------------------------FIHTGEKP   57 (82)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHH------------------------HHHHTCCC
T ss_pred             ccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHH------------------------HHhcCCCC
Confidence            455555555555555555555555555555555555555555555555                        33444455


Q ss_pred             eeccccccccCChHHHHHHHhhhc
Q psy7466         194 FKCAICFEYFSLLESLETHITRRH  217 (338)
Q Consensus       194 ~~C~~C~~~f~~~~~l~~H~~~~H  217 (338)
                      |.|.+|++.|.+...|..|+ +.|
T Consensus        58 ~~C~~C~~~f~~~~~l~~H~-~~H   80 (82)
T 2kmk_A           58 HKCQVCGKAFSQSSNLITHS-RKH   80 (82)
T ss_dssp             EECTTTSCEESSHHHHHHHH-HHH
T ss_pred             CcCCCcchhhCChHHHHHHH-Hhh
Confidence            55555555555555555555 444

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.70  E-value=1e-17  Score=121.72  Aligned_cols=84  Identities=20%  Similarity=0.398  Sum_probs=60.1

Q ss_pred             cccccch--hhHhhhcChHHHHHHHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhccccc
Q psy7466         111 EILLMKA--LDEEMFKMDEENNKEMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQ  188 (338)
Q Consensus       111 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h  188 (338)
                      +++|.|+  .|++.|.+...|..|++.|.+.++|.|+.|++.|.+...|..|+                        ..|
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~------------------------~~h   57 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI------------------------RTH   57 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHH------------------------HHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHH------------------------HHc
Confidence            4567776  47777777777777777777777777777777777777777776                        445


Q ss_pred             CCCcceeccccccccCChHHHHHHHhhhccC
Q psy7466         189 SGRSSFKCAICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       189 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      .+.++|.|.+|++.|.+...|..|+ +.|.+
T Consensus        58 ~~~~~~~C~~C~~~f~~~~~l~~H~-~~H~~   87 (90)
T 1a1h_A           58 TGEKPFACDICGRKFARSDERKRHT-KIHLR   87 (90)
T ss_dssp             HCCCCEECTTTCCEESSHHHHHHHH-GGGGC
T ss_pred             CCCCCccCCCCCchhCCHHHHHHHH-HHhcc
Confidence            5666777777777777777777777 66665

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.69  E-value=1.8e-17  Score=121.75  Aligned_cols=86  Identities=24%  Similarity=0.372  Sum_probs=53.1

Q ss_pred             ccccccchhhHhhhcChHHHHHHHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccC
Q psy7466         110 DEILLMKALDEEMFKMDEENNKEMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQS  189 (338)
Q Consensus       110 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~  189 (338)
                      ++++|.|..|++.|.+...|..|++.|++.++|.|++|++.|.+...|..|+                        ..|.
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~------------------------~~h~   59 (95)
T 2yt9_A            4 GSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHV------------------------RSHD   59 (95)
T ss_dssp             CCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHH------------------------HHHC
T ss_pred             CCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHH------------------------HHhc
Confidence            3455666666666666666666666666666666666666666666666665                        2333


Q ss_pred             CC--cceeccccccccCChHHHHHHHhhhccC
Q psy7466         190 GR--SSFKCAICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       190 ~~--~~~~C~~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      +.  ++|.|.+|++.|.+...|..|++..|.+
T Consensus        60 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~   91 (95)
T 2yt9_A           60 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHSG   91 (95)
T ss_dssp             CCCCSSBCCSSSCCCBSSHHHHHHHHHHTSCC
T ss_pred             CCCCCceECCCccchhCCHHHHHHHHHHhcCC
Confidence            33  5666666666666666666666445654

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.69  E-value=1.6e-17  Score=124.92  Aligned_cols=92  Identities=15%  Similarity=0.125  Sum_probs=68.4

Q ss_pred             ccccccccchhhHhhhcChHHHHHHHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccc
Q psy7466         108 KKDEILLMKALDEEMFKMDEENNKEMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFT  187 (338)
Q Consensus       108 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~  187 (338)
                      ..++++|.|..|++.|.....|..|++.|.  ++|.|.+|++.|.+...|..|+                        . 
T Consensus        11 h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~~~C~~C~~~f~~~~~l~~H~------------------------~-   63 (107)
T 1wjp_A           11 VENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHE------------------------S-   63 (107)
T ss_dssp             CCCCCCCBCTTTCCBCSSHHHHHHHHHHHH--HSBCCTTTCCCBSSHHHHHHHH------------------------H-
T ss_pred             cCCCcCeECCCCCCccCCHHHHHHHHHHCC--CCccCCCCCCccCCHHHHHHHH------------------------H-
Confidence            345667788888888888888888877773  5778888888888887787775                        3 


Q ss_pred             cCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecC
Q psy7466         188 QSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCS  228 (338)
Q Consensus       188 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~  228 (338)
                      |.++++|.|.+|++.|.....|..|++..|.+  +++|.|.
T Consensus        64 H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~--~~~~~~~  102 (107)
T 1wjp_A           64 KCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQ--NNMAPTS  102 (107)
T ss_dssp             HCSTGGGEEGGGTEECSSHHHHHHHHHHTSCC--CCCCCCC
T ss_pred             cCCCCCccCccccchhCCHHHHHHHHHHHcCC--CCCCCCC
Confidence            66777788888888888888888887447777  6777664

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.69  E-value=2.4e-17  Score=117.54  Aligned_cols=78  Identities=36%  Similarity=0.647  Sum_probs=71.6

Q ss_pred             ceeccccccccCChHHHHHHHhhhccCCCCCceecCcCcccccChhHHHHHHHc--CCCceecccccccccChhhHHHHh
Q psy7466         193 SFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLE--KHEVFQCTQCEKYYRSQSTLDVHV  270 (338)
Q Consensus       193 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~--~~~~~~C~~C~k~f~~~~~L~~H~  270 (338)
                      ||.|.+|++.|.+...|..|+ ..|.+  +++|.|..|++.|.+...|..|+++  +.++|.|+.|++.|.+...|..| 
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~-~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H-   76 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHL-LIHSD--TRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITH-   76 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHH-HHHHT--CCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHH-
T ss_pred             CccCCCCcccccCchhHHHHH-HHcCC--CCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHH-
Confidence            589999999999999999999 78888  8899999999999999999999887  77899999999999999999999 


Q ss_pred             hccC
Q psy7466         271 SKKH  274 (338)
Q Consensus       271 ~~~H  274 (338)
                      ++.|
T Consensus        77 ~~~H   80 (82)
T 2kmk_A           77 SRKH   80 (82)
T ss_dssp             HHHH
T ss_pred             HHhh
Confidence            6666

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.69  E-value=1e-17  Score=127.73  Aligned_cols=101  Identities=13%  Similarity=0.050  Sum_probs=88.9

Q ss_pred             ChHHHHHHHhhhccCCCCCceecCcCcccccChhHHHHHHHc--C--CCc-eecccccccc--cChhhHHHHhhccCCCC
Q psy7466         205 LLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLE--K--HEV-FQCTQCEKYY--RSQSTLDVHVSKKHPAG  277 (338)
Q Consensus       205 ~~~~l~~H~~~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~--~--~~~-~~C~~C~k~f--~~~~~L~~H~~~~H~~~  277 (338)
                      +...|..|+ +.|.+  +++|.|.+|++.|.+...|..|+++  +  .++ +.|++|++.|  .....|..| ++.| .+
T Consensus         3 s~~~l~~H~-~~H~~--~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H-~~~H-~~   77 (115)
T 2dmi_A            3 SGSSGKLYG-SIFTG--ASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEM-EGKE-DA   77 (115)
T ss_dssp             CCCCCCCCC-CCCCC--CCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCC-CCSC-CC
T ss_pred             cchhhhhhe-eeeCC--CCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHH-hhcc-CC
Confidence            345678898 88988  8999999999999999999999986  3  234 4599999999  999999999 7889 99


Q ss_pred             CCccccCCCCCCCCCCCCcccccccCCCCCCCc
Q psy7466         278 TGKVKRDIKPNTNILTVTPNRRSARNDSTKATV  310 (338)
Q Consensus       278 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  310 (338)
                      +++|.|++|++.|.+...|..|++.+|......
T Consensus        78 ~~~~~C~~C~k~f~~~~~L~~H~~~hh~~~~~~  110 (115)
T 2dmi_A           78 QKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVS  110 (115)
T ss_dssp             CSSCBCSSSCCBCSSHHHHHHHHHHTTTTTCSC
T ss_pred             CcceECCCCCCccCCHHHHHHHHHHhCCcccCC
Confidence            999999999999999999999999988765543

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=9.3e-17  Score=121.34  Aligned_cols=85  Identities=24%  Similarity=0.494  Sum_probs=67.9

Q ss_pred             cccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcCcccccChhHHHHHHHc--CCCceecccccccccCh
Q psy7466         186 FTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLE--KHEVFQCTQCEKYYRSQ  263 (338)
Q Consensus       186 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~--~~~~~~C~~C~k~f~~~  263 (338)
                      ..|+++++|.| .|++.|.+...|..|+ ..|.+  +++|.|.+|++.|.+...|..|+++  +.++|.|++|++.|.+.
T Consensus         3 ~~h~~~k~~~C-~C~~~f~~~~~l~~H~-~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~   78 (110)
T 2csh_A            3 SGSSGDKLYPC-QCGKSFTHKSQRDRHM-SMHLG--LRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWR   78 (110)
T ss_dssp             CCCCCCCCEEC-TTSCEESSHHHHHHHH-HHHSC--CCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCH
T ss_pred             CCCCCCCCEec-cCCCccCCHHHHHHHH-HHcCC--CcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCH
Confidence            45778888888 8888888888888888 77777  7788888888888888888888776  45678888888888888


Q ss_pred             hhHHHHhhccC
Q psy7466         264 STLDVHVSKKH  274 (338)
Q Consensus       264 ~~L~~H~~~~H  274 (338)
                      ..|..|++..|
T Consensus        79 ~~l~~H~~~~~   89 (110)
T 2csh_A           79 DSFHRHVTSCT   89 (110)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHcc
Confidence            88888844333

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=1e-16  Score=121.08  Aligned_cols=91  Identities=24%  Similarity=0.533  Sum_probs=82.2

Q ss_pred             HhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceeccccccccCChHHHHHHHh
Q psy7466         135 RISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAICFEYFSLLESLETHIT  214 (338)
Q Consensus       135 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  214 (338)
                      .|++.++|.| .|++.|.+...|..|+                        ..|.+.++|.|.+|++.|.+...|..|+ 
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~------------------------~~h~~~~~~~C~~C~~~f~~~~~l~~H~-   57 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHM------------------------SMHLGLRPYGCGVCGKKFKMKHHLVGHM-   57 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHH------------------------HHHSCCCSEECTTTSCEESSSHHHHHHH-
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHH------------------------HHcCCCcCccCCCCCcccCCHHHHHHHH-
Confidence            3788999999 9999999999999998                        5677889999999999999999999999 


Q ss_pred             hhccCCCCCceecCcCcccccChhHHHHHHHcCCCceec
Q psy7466         215 RRHIGICEEPYQCSQCSLCFDQGSLLKAHVLEKHEVFQC  253 (338)
Q Consensus       215 ~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~C  253 (338)
                      ..|.+  +++|.|.+|++.|.....|..|++++++.+..
T Consensus        58 ~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~   94 (110)
T 2csh_A           58 KIHTG--IKPYECNICAKRFMWRDSFHRHVTSCTKSYEA   94 (110)
T ss_dssp             TTTCC--CCCEECSSSCCEESCHHHHHHHHHHHHHHHHH
T ss_pred             HHcCC--CCCeeCCCCcchhcCHHHHHHHHHHccccccc
Confidence            88988  89999999999999999999999885554443

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.65  E-value=1.7e-17  Score=120.25  Aligned_cols=81  Identities=28%  Similarity=0.488  Sum_probs=76.1

Q ss_pred             CcceeccccccccCChHHHHHHHhhhccCCCCCceecCcCcccccChhHHHHHHHc-CCCceecccccccccChhhHHHH
Q psy7466         191 RSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLE-KHEVFQCTQCEKYYRSQSTLDVH  269 (338)
Q Consensus       191 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~-~~~~~~C~~C~k~f~~~~~L~~H  269 (338)
                      ++||.|.+|++.|.+...|..|+ ..|.+  +++|.|++|++.|.+...|..|+.+ +..+|.|+.|++.|.+...|..|
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~-~~H~~--~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~c~~C~~~f~~~~~L~~H   77 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHI-RTHTG--EKPFACDICGRKFARSDERKRHRDIQHILPILEDKVEELLSKNYHLENE   77 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHH-HHHHC--CCCEECTTTCCEESSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHH-HHcCC--CCCccCCCCCCccCCHHHHHHHHHHhCCCcchHHHHHHHHHHHhhhHHH
Confidence            36899999999999999999999 78988  8999999999999999999999988 55789999999999999999999


Q ss_pred             hhccC
Q psy7466         270 VSKKH  274 (338)
Q Consensus       270 ~~~~H  274 (338)
                      +++.|
T Consensus        78 ~~~~h   82 (88)
T 1llm_C           78 VARLK   82 (88)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88887

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.62  E-value=3.8e-16  Score=115.72  Aligned_cols=84  Identities=19%  Similarity=0.464  Sum_probs=65.5

Q ss_pred             ccccccchh--hHhhhcChHHHHHHHHHhcCCCccccc--cccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcc
Q psy7466         110 DEILLMKAL--DEEMFKMDEENNKEMERISQGLEYQCS--VCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMK  185 (338)
Q Consensus       110 ~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~  185 (338)
                      ..++|.|.+  |++.|.....|..|++.|.+.++|.|.  .|++.|.+...|..|+                        
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~------------------------   67 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHY------------------------   67 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHH------------------------
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHH------------------------
Confidence            456777876  888888888888888888888888885  4888888888888886                        


Q ss_pred             cccCCCcceeccccccccCChHHHHHHHhhhcc
Q psy7466         186 FTQSGRSSFKCAICFEYFSLLESLETHITRRHI  218 (338)
Q Consensus       186 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~  218 (338)
                      ..|.++++|.|.+|++.|.....|..|+ +.|.
T Consensus        68 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~H~   99 (100)
T 2ebt_A           68 RKHTGAKPFQCGVCNRSFSRSDHLALHM-KRHQ   99 (100)
T ss_dssp             HHHTSCCSCBCSSSCCBCSSHHHHHHHH-HHHC
T ss_pred             HHhCCCCCeECCCCcCccCCHHHHHHHH-HHhC
Confidence            5566777788888888888888888887 6664

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.61  E-value=4.3e-17  Score=118.06  Aligned_cols=83  Identities=12%  Similarity=0.089  Sum_probs=66.3

Q ss_pred             ccccchhhHhhhcChHHHHHHHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCC
Q psy7466         112 ILLMKALDEEMFKMDEENNKEMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGR  191 (338)
Q Consensus       112 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~  191 (338)
                      ++|.|..|++.|.....|..|++.|++.++|.|+.|++.|.+...|..|+++|                        . .
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h------------------------~-~   56 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ------------------------H-I   56 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHH------------------------T-H
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHh------------------------C-C
Confidence            57888888888888888888888888888888888888888888888887443                        2 2


Q ss_pred             cceeccccccccCChHHHHHHHhhhccC
Q psy7466         192 SSFKCAICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       192 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      .+|.|..|++.|.+...|..|++..|..
T Consensus        57 ~~~~c~~C~~~f~~~~~L~~H~~~~h~~   84 (88)
T 1llm_C           57 LPILEDKVEELLSKNYHLENEVARLKKL   84 (88)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcchHHHHHHHHHHHhhhHHHHHHHHHH
Confidence            5688888888888888888888666643

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.61  E-value=3.2e-16  Score=113.50  Aligned_cols=80  Identities=26%  Similarity=0.636  Sum_probs=48.5

Q ss_pred             Ccccccc--ccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceecc--ccccccCChHHHHHHHhh
Q psy7466         140 LEYQCSV--CSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCA--ICFEYFSLLESLETHITR  215 (338)
Q Consensus       140 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~  215 (338)
                      .+|.|.+  |++.|.+...|..|+                        ..|.+.++|.|+  .|++.|.+...|..|+ .
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~------------------------~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~   58 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHL------------------------RTHTGEKPYHCDWDGCGWKFARSDELTRHY-R   58 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHH------------------------TTSCSSCCEECCSTTTCCEESSHHHHHHHH-H
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHH------------------------HhcCCCCCcCCCCCCCCCccCCHHHHHHHH-H
Confidence            3456666  666666666666665                        455555666665  3666666666666665 5


Q ss_pred             hccCCCCCceecCcCcccccChhHHHHHHHc
Q psy7466         216 RHIGICEEPYQCSQCSLCFDQGSLLKAHVLE  246 (338)
Q Consensus       216 ~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~  246 (338)
                      .|.+  +++|.|+.|++.|.+...|..|+++
T Consensus        59 ~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~   87 (89)
T 2wbs_A           59 KHTG--HRPFQCQKCDRAFSRSDHLALHMKR   87 (89)
T ss_dssp             HHHC--CCCEECSSSSCEESSHHHHHHHGGG
T ss_pred             HcCC--CCCccCCCCCcccCCHHHHHHHHHh
Confidence            5655  5666666666666666666666544

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.60  E-value=1.7e-15  Score=109.61  Aligned_cols=80  Identities=30%  Similarity=0.727  Sum_probs=72.2

Q ss_pred             Ccceeccc--cccccCChHHHHHHHhhhccCCCCCceecC--cCcccccChhHHHHHHHc--CCCceecccccccccChh
Q psy7466         191 RSSFKCAI--CFEYFSLLESLETHITRRHIGICEEPYQCS--QCSLCFDQGSLLKAHVLE--KHEVFQCTQCEKYYRSQS  264 (338)
Q Consensus       191 ~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~--~~~~~~C~~C~k~f~~~~  264 (338)
                      ..+|.|.+  |++.|.+...|..|+ ..|.+  +++|.|+  .|++.|.+...|..|+++  +.++|.|+.|++.|.+..
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~--~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~   79 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHL-RTHTG--EKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSD   79 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHH-TTSCS--SCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHH-HhcCC--CCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHH
Confidence            46799999  999999999999999 78888  8899997  599999999999999877  788999999999999999


Q ss_pred             hHHHHhhccC
Q psy7466         265 TLDVHVSKKH  274 (338)
Q Consensus       265 ~L~~H~~~~H  274 (338)
                      .|..| ++.|
T Consensus        80 ~l~~H-~~~H   88 (89)
T 2wbs_A           80 HLALH-MKRH   88 (89)
T ss_dssp             HHHHH-GGGG
T ss_pred             HHHHH-HHhh
Confidence            99999 6666

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.57  E-value=2.2e-15  Score=100.14  Aligned_cols=55  Identities=29%  Similarity=0.548  Sum_probs=33.4

Q ss_pred             CCceecCcCcccccChhHHHHHHHc--CCCceecccccccccChhhHHHHhhccCCCCC
Q psy7466         222 EEPYQCSQCSLCFDQGSLLKAHVLE--KHEVFQCTQCEKYYRSQSTLDVHVSKKHPAGT  278 (338)
Q Consensus       222 ~~~~~C~~C~~~f~~~~~l~~H~~~--~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  278 (338)
                      |+||.|.+||+.|.....|..|+++  +++||.|++||+.|...+.|..| +++| +|+
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H-~~~H-tge   58 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRH-LKVH-QNK   58 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHH-GGGG-SCC
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHH-hCcc-CCC
Confidence            4566666666666666666666555  55666666666666666666666 5556 443

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.57  E-value=3.6e-15  Score=110.36  Aligned_cols=82  Identities=29%  Similarity=0.675  Sum_probs=71.2

Q ss_pred             CCCcceeccc--cccccCChHHHHHHHhhhccCCCCCceecC--cCcccccChhHHHHHHHc--CCCceecccccccccC
Q psy7466         189 SGRSSFKCAI--CFEYFSLLESLETHITRRHIGICEEPYQCS--QCSLCFDQGSLLKAHVLE--KHEVFQCTQCEKYYRS  262 (338)
Q Consensus       189 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~--~~~~~~C~~C~k~f~~  262 (338)
                      ...++|.|.+  |++.|.+...|..|+ ..|.+  +++|.|.  .|++.|.....|..|+++  +.++|.|++|++.|.+
T Consensus        11 ~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~--~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~   87 (100)
T 2ebt_A           11 EKRRIHYCDYPGCTKVYTKSSHLKAHL-RTHTG--EKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSR   87 (100)
T ss_dssp             CSCCCEECCSSSCCCEESCHHHHHHHH-HHHSC--CCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSS
T ss_pred             ccCcceEcCCCCCCCcccCHHHHHHHH-HHhCC--CCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCC
Confidence            3456799997  999999999999999 78887  7899996  599999999999999877  6788999999999999


Q ss_pred             hhhHHHHhhccC
Q psy7466         263 QSTLDVHVSKKH  274 (338)
Q Consensus       263 ~~~L~~H~~~~H  274 (338)
                      ...|..| ++.|
T Consensus        88 ~~~l~~H-~~~H   98 (100)
T 2ebt_A           88 SDHLALH-MKRH   98 (100)
T ss_dssp             HHHHHHH-HHHH
T ss_pred             HHHHHHH-HHHh
Confidence            9999999 6666

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.55  E-value=2.4e-15  Score=99.96  Aligned_cols=56  Identities=20%  Similarity=0.446  Sum_probs=32.2

Q ss_pred             CCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceeccccccccCChHHHHHHHhhhcc
Q psy7466         139 GLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAICFEYFSLLESLETHITRRHI  218 (338)
Q Consensus       139 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~  218 (338)
                      ++||.|.+||+.|...+.|..|+                        ++|++++||.|.+||+.|...+.|..|+ +.|.
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~------------------------~~Ht~ekp~~C~~C~k~F~~~~~L~~H~-~~Ht   56 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHR------------------------RAHLGYRPRSCPECGKCFRDQSEVNRHL-KVHQ   56 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHH------------------------HHHHTCCCEECTTTCCEESSHHHHHHHG-GGGS
T ss_pred             CCCccCCCCCCEeCCHHHHHHHH------------------------HHhCCCcCeECCCCCCCcCCHHHHHHHh-CccC
Confidence            35555655666665555555555                        4455555556655666665555566665 5555


Q ss_pred             C
Q psy7466         219 G  219 (338)
Q Consensus       219 ~  219 (338)
                      +
T Consensus        57 g   57 (60)
T 4gzn_C           57 N   57 (60)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.55  E-value=4.4e-15  Score=106.30  Aligned_cols=77  Identities=25%  Similarity=0.449  Sum_probs=69.5

Q ss_pred             ceec--cccccccCChHHHHHHHhhhccCCCCCceecCc--CcccccChhHHHHHHHcCCCceeccc---ccccccChhh
Q psy7466         193 SFKC--AICFEYFSLLESLETHITRRHIGICEEPYQCSQ--CSLCFDQGSLLKAHVLEKHEVFQCTQ---CEKYYRSQST  265 (338)
Q Consensus       193 ~~~C--~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~C~~---C~k~f~~~~~  265 (338)
                      ||.|  +.|++.|.+...|..|+ +.|.+  +++|.|++  |++.|.+...|..|++++.. |.|..   |++.|.+...
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~-~~h~~--~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~C~~~~~C~~~f~~~~~   76 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQ-FSHTQ--QLPYECPHEGCDKRFSLPSRLKRHEKVHAG-YPCKKDDSCSFVGKTWTL   76 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHH-HHHHT--TCCEECCSTTCCCEESSHHHHHHHHHHHHS-EECCSCSSCCCEESSHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHH-HHhCC--CCCeeCCCCCCcCccCCHHHHHHHHHHhCC-CCCCCCCCCCCccCCHHH
Confidence            6899  88999999999999999 88988  89999988  99999999999999988544 99999   9999999999


Q ss_pred             HHHHhhccC
Q psy7466         266 LDVHVSKKH  274 (338)
Q Consensus       266 L~~H~~~~H  274 (338)
                      |..|+ +.|
T Consensus        77 l~~H~-~~h   84 (85)
T 2j7j_A           77 YLKHV-AEC   84 (85)
T ss_dssp             HHHHH-HHC
T ss_pred             HHHHH-Hhc
Confidence            99994 444

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=4.1e-15  Score=106.85  Aligned_cols=77  Identities=30%  Similarity=0.577  Sum_probs=57.2

Q ss_pred             HHHHHhhhccCCCCCceecCcCcccccChhHHHHHHHcC--C----CceecccccccccChhhHHHHhhccCCCCCCccc
Q psy7466         209 LETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLEK--H----EVFQCTQCEKYYRSQSTLDVHVSKKHPAGTGKVK  282 (338)
Q Consensus       209 l~~H~~~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~--~----~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~  282 (338)
                      |..|+ +.|.+  +++|.|.+|++.|.....|..|++.+  .    ++|.|.+|++.|.+...|..| ++.| .+++++.
T Consensus         3 ~~~H~-~~H~~--~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H-~~~h-~~~~~~~   77 (86)
T 1x6h_A            3 SGSSG-RTHTG--EKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARH-ADNC-AGPDGVE   77 (86)
T ss_dssp             TTCCS-TTCCC--CCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHH-HHHC-CCCCSCC
T ss_pred             ccccc-ceecC--CCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHH-HHHc-cCCCCcc
Confidence            44566 66666  67777777777777777777776551  1    568888888888888888888 6777 7888888


Q ss_pred             cCCCCCCC
Q psy7466         283 RDIKPNTN  290 (338)
Q Consensus       283 C~~C~~~f  290 (338)
                      |..|+..|
T Consensus        78 ~~~~~~~~   85 (86)
T 1x6h_A           78 GENSGPSS   85 (86)
T ss_dssp             CCCCCCCC
T ss_pred             cCCCCCCC
Confidence            88888765

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=2.5e-15  Score=107.94  Aligned_cols=79  Identities=19%  Similarity=0.361  Sum_probs=40.9

Q ss_pred             HHHHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCC---CcceeccccccccCCh
Q psy7466         130 NKEMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSG---RSSFKCAICFEYFSLL  206 (338)
Q Consensus       130 ~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~---~~~~~C~~C~~~f~~~  206 (338)
                      ..|+++|+++++|.|.+|++.|.+...|..|++++                       |..   +++|.|.+|++.|...
T Consensus         4 ~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~-----------------------~~~~~~~~~~~C~~C~~~f~~~   60 (86)
T 1x6h_A            4 GSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRY-----------------------HDPNFVPAAFVCSKCGKTFTRR   60 (86)
T ss_dssp             TCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHT-----------------------TCSSCCCCCEECSSSCCEESCH
T ss_pred             ccccceecCCCCCcCCCCCCccCCHHHHHHHHHHh-----------------------cCCcCCCcceECCCCCChhCCH
Confidence            34555555555555555555555555555554211                       111   1455555555555555


Q ss_pred             HHHHHHHhhhccCCCCCceecCcCcccc
Q psy7466         207 ESLETHITRRHIGICEEPYQCSQCSLCF  234 (338)
Q Consensus       207 ~~l~~H~~~~H~~~~~~~~~C~~C~~~f  234 (338)
                      ..|..|+ ..|.+  ++++.|..|+..|
T Consensus        61 ~~L~~H~-~~h~~--~~~~~~~~~~~~~   85 (86)
T 1x6h_A           61 NTMARHA-DNCAG--PDGVEGENSGPSS   85 (86)
T ss_dssp             HHHHHHH-HHCCC--CCSCCCCCCCCCC
T ss_pred             HHHHHHH-HHccC--CCCcccCCCCCCC
Confidence            5555555 55554  4555555555443

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=8.2e-15  Score=103.51  Aligned_cols=68  Identities=24%  Similarity=0.455  Sum_probs=31.2

Q ss_pred             Ccceeccc--cccccCChHHHHHHHhhhccCCCCCceecCc--CcccccChhHHHHHHHc--CCCceecccccccc
Q psy7466         191 RSSFKCAI--CFEYFSLLESLETHITRRHIGICEEPYQCSQ--CSLCFDQGSLLKAHVLE--KHEVFQCTQCEKYY  260 (338)
Q Consensus       191 ~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~--~~~~~~C~~C~k~f  260 (338)
                      .++|.|..  |++.|.+...|..|++..|.+  +++|.|++  |++.|.+...|..|+++  ++++|.|++|++.|
T Consensus         5 ~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~--~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A            5 SSGMPCDFPGCGRIFSNRQYLNHHKKYQHIH--QKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             CSSEECSSTTTCCEESSHHHHHHHHHHGGGS--CCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCC
T ss_pred             CCCccCCCCCCcCccCCHHHHHHHHHHHhCC--CCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCC
Confidence            34444443  444444444444444113444  44444444  44444444444444443  34444444444444

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.53  E-value=1.2e-15  Score=118.61  Aligned_cols=79  Identities=19%  Similarity=0.250  Sum_probs=62.5

Q ss_pred             CcceeccccccccC------ChHHHHHHHhhhccCCCCCceecCcCcccccChhHHHHHHHcCCCceecccccccccChh
Q psy7466         191 RSSFKCAICFEYFS------LLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLEKHEVFQCTQCEKYYRSQS  264 (338)
Q Consensus       191 ~~~~~C~~C~~~f~------~~~~l~~H~~~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~C~~C~k~f~~~~  264 (338)
                      .+.+.|++|++.|.      ....|..|+  .|.+  ++||.|++|++.|.....|..|++++.++|.|++|++.|.+..
T Consensus        39 ~~~~~c~~~~~~~~~~~~~~~~~~l~~h~--~h~~--~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~C~~C~k~f~~~~  114 (129)
T 2wbt_A           39 QKRLIRAIVKTLIHNPQLLDESSYLYRLL--ASKA--ISQFVCPLCLMPFSSSVSLKQHIRYTEHTKVCPVCKKEFTSTD  114 (129)
T ss_dssp             HHHHHHHHHHHHHHCGGGTTTHHHHHHHH--HHHH--HCSEECTTTCCEESSHHHHHHHHHHTCCCCBCTTTCCBCSSHH
T ss_pred             hCcccchhhhcccCCCcccCCHHHHHHHH--HhCC--CCCeECCCCCcccCCHhHHHHHHHHCCCCCCCCCCCcccCCHH
Confidence            34567777766655      556667775  4777  7889999999999999999999888888899999999999999


Q ss_pred             hHHHHhhccC
Q psy7466         265 TLDVHVSKKH  274 (338)
Q Consensus       265 ~L~~H~~~~H  274 (338)
                      .|..| ++.|
T Consensus       115 ~l~~H-~~~h  123 (129)
T 2wbt_A          115 SALDH-VCKK  123 (129)
T ss_dssp             HHHHH-HHHT
T ss_pred             HHHHH-HHHH
Confidence            99999 5555

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=1.9e-14  Score=101.58  Aligned_cols=68  Identities=21%  Similarity=0.400  Sum_probs=63.5

Q ss_pred             CCceecCc--CcccccChhHHHHHHH-c--CCCceeccc--ccccccChhhHHHHhhccCCCCCCccccCCCCCCCC
Q psy7466         222 EEPYQCSQ--CSLCFDQGSLLKAHVL-E--KHEVFQCTQ--CEKYYRSQSTLDVHVSKKHPAGTGKVKRDIKPNTNI  291 (338)
Q Consensus       222 ~~~~~C~~--C~~~f~~~~~l~~H~~-~--~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~~~~~~C~~C~~~f~  291 (338)
                      +++|.|..  |++.|.+...|..|++ .  +.++|.|++  |++.|.+...|..| ++.| .++++|.|++|++.|.
T Consensus         5 ~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H-~~~H-~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            5 SSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEH-MKLH-SDTRDYICEFSGPSSG   79 (79)
T ss_dssp             CSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHH-HHHH-HTSCCCSCCSSSCCCC
T ss_pred             CCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHH-HHHh-CCCCCeeCCCCCCCCC
Confidence            78999997  9999999999999988 4  678999999  99999999999999 6789 8999999999999984

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.50  E-value=1.1e-14  Score=104.13  Aligned_cols=74  Identities=19%  Similarity=0.293  Sum_probs=46.0

Q ss_pred             cccc--hhhHhhhcChHHHHHHHHHhcCCCcccccc--ccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhccccc
Q psy7466         113 LLMK--ALDEEMFKMDEENNKEMERISQGLEYQCSV--CSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQ  188 (338)
Q Consensus       113 ~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h  188 (338)
                      +|.|  +.|++.|.+...|..|++.|.+.++|.|++  |++.|.+...|..|++                        .|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~------------------------~h   56 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEK------------------------VH   56 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHH------------------------HH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHH------------------------Hh
Confidence            3556  666666666666666666666666666665  6666666666666652                        23


Q ss_pred             CCCcceeccc---cccccCChHHHHHHH
Q psy7466         189 SGRSSFKCAI---CFEYFSLLESLETHI  213 (338)
Q Consensus       189 ~~~~~~~C~~---C~~~f~~~~~l~~H~  213 (338)
                      .+   |.|..   |++.|.+...|..|+
T Consensus        57 ~~---~~C~~~~~C~~~f~~~~~l~~H~   81 (85)
T 2j7j_A           57 AG---YPCKKDDSCSFVGKTWTLYLKHV   81 (85)
T ss_dssp             HS---EECCSCSSCCCEESSHHHHHHHH
T ss_pred             CC---CCCCCCCCCCCccCCHHHHHHHH
Confidence            33   66666   666666666666665

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=2.9e-14  Score=105.51  Aligned_cols=64  Identities=22%  Similarity=0.433  Sum_probs=39.6

Q ss_pred             CCceecCcCcccccChhHHHHHHHc-C-----CCceecccccccccChhhHHHHhhccCCCCCCccccCCC
Q psy7466         222 EEPYQCSQCSLCFDQGSLLKAHVLE-K-----HEVFQCTQCEKYYRSQSTLDVHVSKKHPAGTGKVKRDIK  286 (338)
Q Consensus       222 ~~~~~C~~C~~~f~~~~~l~~H~~~-~-----~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~C~~C  286 (338)
                      ++||.|..|++.|.....|..|++. +     .++|.|.+||+.|.+...|..|+++.| .+++||.|.++
T Consensus        16 ekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~H-tgekpy~C~~~   85 (102)
T 2ghf_A           16 EGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYH-PGEENFKLTMV   85 (102)
T ss_dssp             CSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTS-TTCCCEEEEEC
T ss_pred             CcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhc-CCCCCeeCCcc
Confidence            4555555555555555555555542 2     456666677777777777777755667 67777777663

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.47  E-value=2.3e-15  Score=117.01  Aligned_cols=114  Identities=12%  Similarity=0.055  Sum_probs=88.7

Q ss_pred             cccCCCcceecccccccc--CChHHHHHHHhhhccCCCCCceecCcCccccc------ChhHHHHHHHc-CCCceecccc
Q psy7466         186 FTQSGRSSFKCAICFEYF--SLLESLETHITRRHIGICEEPYQCSQCSLCFD------QGSLLKAHVLE-KHEVFQCTQC  256 (338)
Q Consensus       186 ~~h~~~~~~~C~~C~~~f--~~~~~l~~H~~~~H~~~~~~~~~C~~C~~~f~------~~~~l~~H~~~-~~~~~~C~~C  256 (338)
                      ..+.+.++|.|...+...  .....+..|.  ....  .+++.|++|+..|.      ....|..|+.. +.++|.|++|
T Consensus         5 ~~~~~~k~~~~~~k~~~~~~s~ee~~~~~~--l~~~--~~~~~c~~~~~~~~~~~~~~~~~~l~~h~~h~~~~~~~C~~C   80 (129)
T 2wbt_A            5 DVDSGSKKYLSNHKGIFIHVTLEELKRYHQ--LTPE--QKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPLC   80 (129)
T ss_dssp             CCCTTCCGGGGCSSCEEEECCHHHHHHHTT--SCHH--HHHHHHHHHHHHHHCGGGTTTHHHHHHHHHHHHHCSEECTTT
T ss_pred             hhcccccccccccCCeeeeecHHhhhcccc--CChh--hCcccchhhhcccCCCcccCCHHHHHHHHHhCCCCCeECCCC
Confidence            577889999988765443  2222222232  1222  46788988877665      66778888754 7899999999


Q ss_pred             cccccChhhHHHHhhccCCCCCCccccCCCCCCCCCCCCcccccccCCCCC
Q psy7466         257 EKYYRSQSTLDVHVSKKHPAGTGKVKRDIKPNTNILTVTPNRRSARNDSTK  307 (338)
Q Consensus       257 ~k~f~~~~~L~~H~~~~H~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  307 (338)
                      |+.|.....|..| ++.|   +++|.|+.|++.|.+...|.+|++.+|+..
T Consensus        81 ~k~f~~~~~l~~H-~~~H---~~~~~C~~C~k~f~~~~~l~~H~~~h~~~~  127 (129)
T 2wbt_A           81 LMPFSSSVSLKQH-IRYT---EHTKVCPVCKKEFTSTDSALDHVCKKHNIC  127 (129)
T ss_dssp             CCEESSHHHHHHH-HHHT---CCCCBCTTTCCBCSSHHHHHHHHHHTTCCC
T ss_pred             CcccCCHhHHHHH-HHHC---CCCCCCCCCCcccCCHHHHHHHHHHHCCcc
Confidence            9999999999999 6778   788999999999999999999999998763

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=1e-13  Score=97.36  Aligned_cols=64  Identities=31%  Similarity=0.551  Sum_probs=40.0

Q ss_pred             cCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceeccccccccCChHHHHHHHhhh
Q psy7466         137 SQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAICFEYFSLLESLETHITRR  216 (338)
Q Consensus       137 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  216 (338)
                      .+.++|.|.+|++.|.+...|..|+                        ..|.+.++|.|.+|++.|.....|..|+ +.
T Consensus        14 ~~~~~~~C~~C~~~f~~~~~l~~H~------------------------~~h~~~~~~~C~~C~~~f~~~~~L~~H~-~~   68 (77)
T 2cot_A           14 RERRRYKCDECGKSFSHSSDLSKHR------------------------RTHTGEKPYKCDECGKAFIQRSHLIGHH-RV   68 (77)
T ss_dssp             CCSCSSBCSSSCCBCSCHHHHHHHH------------------------TTTCCSCSEECSSSCCEESSHHHHHHHG-GG
T ss_pred             CCCCCEECCCCCcccCCHHHHHHHH------------------------HHcCCCcCeeCCCCCCccCCHHHHHHHH-HH
Confidence            3455666666666666666666665                        4555666666666666666666666666 55


Q ss_pred             ccCCCCCceec
Q psy7466         217 HIGICEEPYQC  227 (338)
Q Consensus       217 H~~~~~~~~~C  227 (338)
                      |.+  ++||.|
T Consensus        69 H~~--~~p~~C   77 (77)
T 2cot_A           69 HTG--SGPSSG   77 (77)
T ss_dssp             SCC--CCCCCC
T ss_pred             hCC--CCCCCC
Confidence            665  566655

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=1.1e-13  Score=102.42  Aligned_cols=73  Identities=18%  Similarity=0.358  Sum_probs=62.9

Q ss_pred             cccCCCcceeccccccccCChHHHHHHHhhhccC-CCCCceecCcCcccccChhHHHHH-HHc--CCCceecccccc
Q psy7466         186 FTQSGRSSFKCAICFEYFSLLESLETHITRRHIG-ICEEPYQCSQCSLCFDQGSLLKAH-VLE--KHEVFQCTQCEK  258 (338)
Q Consensus       186 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~-~~~~~~~C~~C~~~f~~~~~l~~H-~~~--~~~~~~C~~C~k  258 (338)
                      ...+|++||.|..||+.|.....|..|++..|.+ .+++||.|.+||+.|.....|..| +++  +++||.|.++..
T Consensus        11 ~~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~~   87 (102)
T 2ghf_A           11 QNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVKR   87 (102)
T ss_dssp             TCCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECCC
T ss_pred             ccCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcccC
Confidence            4567889999999999999999999999446943 238999999999999999999999 666  789999998543

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=1.6e-13  Score=96.34  Aligned_cols=60  Identities=27%  Similarity=0.581  Sum_probs=39.0

Q ss_pred             CCceecCcCcccccChhHHHHHHHc--CCCceecccccccccChhhHHHHhhccCCCCCCcccc
Q psy7466         222 EEPYQCSQCSLCFDQGSLLKAHVLE--KHEVFQCTQCEKYYRSQSTLDVHVSKKHPAGTGKVKR  283 (338)
Q Consensus       222 ~~~~~C~~C~~~f~~~~~l~~H~~~--~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~C  283 (338)
                      +++|.|.+|++.|.....|..|+++  +.++|.|++|++.|.....|..| ++.| .++++|.|
T Consensus        16 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H-~~~H-~~~~p~~C   77 (77)
T 2cot_A           16 RRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH-HRVH-TGSGPSSG   77 (77)
T ss_dssp             SCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHH-GGGS-CCCCCCCC
T ss_pred             CCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHH-HHHh-CCCCCCCC
Confidence            4566666666666666666666555  34566677777777777777777 5666 66777766

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=1.6e-13  Score=100.69  Aligned_cols=79  Identities=22%  Similarity=0.311  Sum_probs=66.2

Q ss_pred             cccCChHHHHHHHhhhccCCCCCceecCcCcccc-cChhHHHHHHHc-CCCceecccccccccChhhHHHHhhccCCCCC
Q psy7466         201 EYFSLLESLETHITRRHIGICEEPYQCSQCSLCF-DQGSLLKAHVLE-KHEVFQCTQCEKYYRSQSTLDVHVSKKHPAGT  278 (338)
Q Consensus       201 ~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~~~f-~~~~~l~~H~~~-~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  278 (338)
                      ..|.....|..|+ ..|.+  +++|.|+.|++.| .+...|..|+++ ++++|.|.+|++.|.....|..|+++.| ++.
T Consensus        14 ~~~~~~~~~~~~~-~~~~~--~~~~~C~~C~k~F~~~~~~L~~H~~~h~~k~~~C~~Cgk~F~~~~~L~~H~~~~H-~~~   89 (96)
T 2ctd_A           14 PVYAAGSLEEQWY-LEIVD--KGSVSCPTCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYHVMANH-NSL   89 (96)
T ss_dssp             CSSCTTCHHHHHH-HHHHH--TSCEECTTTCSCEESSHHHHHHHHHHHCCCCCCCSSSCCCCSSHHHHHHHHHHHT-CCC
T ss_pred             CCCCCchHHHHHH-HHhcC--CCCcCCCCCCCCcccCHHHHHHHHHHHCCCCeECCCCCCeeCCHHHHHHHhHHhc-CCC
Confidence            4667788888888 77777  7899999999999 899999999877 6788999999999999999999977889 665


Q ss_pred             Ccccc
Q psy7466         279 GKVKR  283 (338)
Q Consensus       279 ~~~~C  283 (338)
                      ..|.+
T Consensus        90 p~~~~   94 (96)
T 2ctd_A           90 PSGPS   94 (96)
T ss_dssp             SSCSC
T ss_pred             CCCCC
Confidence            54443

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.42  E-value=1.3e-13  Score=101.31  Aligned_cols=71  Identities=18%  Similarity=0.294  Sum_probs=61.6

Q ss_pred             hcChHHHHHHHHHhcCCCccccccccccc-cChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceecccccc
Q psy7466         123 FKMDEENNKEMERISQGLEYQCSVCSQVF-IEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAICFE  201 (338)
Q Consensus       123 f~~~~~l~~H~~~h~~~~~~~C~~C~~~f-~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C~~  201 (338)
                      |.....|..|++.|.+.++|.|+.|++.| .+...|..|+                        ..| ++++|.|.+|++
T Consensus        16 ~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~------------------------~~h-~~k~~~C~~Cgk   70 (96)
T 2ctd_A           16 YAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHM------------------------ENC-KQEMFTCHHCGK   70 (96)
T ss_dssp             SCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHH------------------------HHH-CCCCCCCSSSCC
T ss_pred             CCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHH------------------------HHH-CCCCeECCCCCC
Confidence            34566788888889999999999999999 8999999997                        567 788999999999


Q ss_pred             ccCChHHHHHH-HhhhccC
Q psy7466         202 YFSLLESLETH-ITRRHIG  219 (338)
Q Consensus       202 ~f~~~~~l~~H-~~~~H~~  219 (338)
                      .|.....|..| + ..|.+
T Consensus        71 ~F~~~~~L~~H~~-~~H~~   88 (96)
T 2ctd_A           71 QLRSLAGMKYHVM-ANHNS   88 (96)
T ss_dssp             CCSSHHHHHHHHH-HHTCC
T ss_pred             eeCCHHHHHHHhH-HhcCC
Confidence            99999999999 6 88876

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=6.1e-14  Score=103.49  Aligned_cols=77  Identities=19%  Similarity=0.263  Sum_probs=63.1

Q ss_pred             cChHHHHHHHHHhcCCCcccccccccccc-ChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCC-Ccceecccccc
Q psy7466         124 KMDEENNKEMERISQGLEYQCSVCSQVFI-EKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSG-RSSFKCAICFE  201 (338)
Q Consensus       124 ~~~~~l~~H~~~h~~~~~~~C~~C~~~f~-~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~-~~~~~C~~C~~  201 (338)
                      .....+..|++.|.+.++|.|.+|++.|. +...|..|++                        .|.+ +++|.|.+|++
T Consensus         7 ~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~------------------------~h~~~~~~~~C~~C~k   62 (98)
T 2gqj_A            7 GPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHME------------------------VCQKLQDALKCQHCRK   62 (98)
T ss_dssp             CCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHH------------------------HHHHHHHHHSCSSSCC
T ss_pred             CCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHH------------------------HHcCCCCCEECCCCCC
Confidence            34456778999999999999999999999 9999999984                        4444 67899999999


Q ss_pred             ccCChHHHHHHHhhhccCCCCCceec
Q psy7466         202 YFSLLESLETHITRRHIGICEEPYQC  227 (338)
Q Consensus       202 ~f~~~~~l~~H~~~~H~~~~~~~~~C  227 (338)
                      .|.....|..|+ +.|.+  ++|+..
T Consensus        63 ~F~~~~~L~~H~-~~h~~--~kp~~~   85 (98)
T 2gqj_A           63 QFKSKAGLNYHT-MAEHS--AKPSDA   85 (98)
T ss_dssp             CCSCHHHHHHHH-HHHSC--SCSSCC
T ss_pred             ccCCHHHHHHHH-HHHcC--CCCCCC
Confidence            999999999998 77777  666543

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.39  E-value=4.7e-13  Score=95.51  Aligned_cols=53  Identities=26%  Similarity=0.478  Sum_probs=31.4

Q ss_pred             CCceecCcCcccccChhHHHHHHHc--CCCceecccccccccChhhHHHHhhccC
Q psy7466         222 EEPYQCSQCSLCFDQGSLLKAHVLE--KHEVFQCTQCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       222 ~~~~~C~~C~~~f~~~~~l~~H~~~--~~~~~~C~~C~k~f~~~~~L~~H~~~~H  274 (338)
                      .++|.|++|++.|.+...|..|+++  +++||.|++|++.|.+...|..|+++.|
T Consensus        26 ~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H   80 (85)
T 2lv2_A           26 AECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCH   80 (85)
T ss_dssp             CTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTC
T ss_pred             CCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccC
Confidence            4555566666666666666666554  4455666666666666666666655556

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=4e-15  Score=103.31  Aligned_cols=71  Identities=20%  Similarity=0.374  Sum_probs=63.4

Q ss_pred             hHHHHHHHhhhccCCCCCceecCcCcccccChhHHHHHHHcCCCceecccccccccChhhHHHHhhccCCCCCCccccCC
Q psy7466         206 LESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLEKHEVFQCTQCEKYYRSQSTLDVHVSKKHPAGTGKVKRDI  285 (338)
Q Consensus       206 ~~~l~~H~~~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~C~~  285 (338)
                      ...|..|+ +.|.+  +++|.|.+|++.|.....|..     .++|.|+.|++.|.+...|..| ++.| .++++|.|++
T Consensus         3 ~~~l~~H~-~~h~~--~~~~~C~~C~k~f~~~~~l~~-----~~~~~C~~C~~~f~~~~~l~~H-~~~H-~~~~~~~C~~   72 (73)
T 2ctu_A            3 SGSSGKRQ-KIHLG--DRSQKCSKCGIIFIRRSTLSR-----RKTPMCEKCRKDSCQEAALNKD-EGNE-SGKKTSGPSS   72 (73)
T ss_dssp             CCSCCCCC-CCCCC--CSEEECSSSCCEEECCCCCCC-----SSSCCCHHHHHTCSCCCSSCCC-SSCC-CCCCCSSCCC
T ss_pred             chhHHHHH-HHhCC--CCCeeCCcccchhCCHHHhCc-----CCCCCCCCCChhhcCHHHHHHH-HHhh-cCCCCCCCCC
Confidence            45677888 78888  899999999999999888766     7899999999999999999999 7889 9999999999


Q ss_pred             C
Q psy7466         286 K  286 (338)
Q Consensus       286 C  286 (338)
                      |
T Consensus        73 C   73 (73)
T 2ctu_A           73 G   73 (73)
T ss_dssp             C
T ss_pred             C
Confidence            8

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.37  E-value=1.7e-13  Score=96.27  Aligned_cols=61  Identities=36%  Similarity=0.757  Sum_probs=33.1

Q ss_pred             HHHhhhccCCCCCceecCcCcccccChhHHHHHHHc---C-CCceecccccccccChhhHHHHhhccC
Q psy7466         211 THITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLE---K-HEVFQCTQCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       211 ~H~~~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~---~-~~~~~C~~C~k~f~~~~~L~~H~~~~H  274 (338)
                      .|+ +.|.+  ++||.|.+|++.|.....|..|++.   . .++|.|++|++.|.+...|..|++..|
T Consensus         5 ~H~-~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H   69 (77)
T 2ct1_A            5 SSG-RTHSG--EKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQH   69 (77)
T ss_dssp             CCC-CCCSC--CCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTS
T ss_pred             ccc-cccCC--CCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhC
Confidence            344 45554  5555555555555555555555542   1 145666666666666666666644445

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=1.9e-13  Score=100.79  Aligned_cols=76  Identities=18%  Similarity=0.274  Sum_probs=57.8

Q ss_pred             ccCChHHHHHHHhhhccCCCCCceecCcCccccc-ChhHHHHHHHc--C-CCceecccccccccChhhHHHHhhccCCCC
Q psy7466         202 YFSLLESLETHITRRHIGICEEPYQCSQCSLCFD-QGSLLKAHVLE--K-HEVFQCTQCEKYYRSQSTLDVHVSKKHPAG  277 (338)
Q Consensus       202 ~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~~~f~-~~~~l~~H~~~--~-~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~  277 (338)
                      .+.....+..|+ +.|.+  +++|.|.+|++.|. ....|..|+++  + .++|.|.+|++.|.+...|..| ++.| .+
T Consensus         5 s~~~~~~~~~h~-~~h~~--~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H-~~~h-~~   79 (98)
T 2gqj_A            5 SSGPGGPEEQWQ-RAIHE--RGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYH-TMAE-HS   79 (98)
T ss_dssp             CCCCCCSCSHHH-HTTTT--TSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHH-HHHH-SC
T ss_pred             CCCCCCcHHHHH-HHhcc--CCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHH-HHHH-cC
Confidence            344555667787 77877  78888888888888 88888888877  3 5688888888888888888888 5555 56


Q ss_pred             CCccc
Q psy7466         278 TGKVK  282 (338)
Q Consensus       278 ~~~~~  282 (338)
                      ++++.
T Consensus        80 ~kp~~   84 (98)
T 2gqj_A           80 AKPSD   84 (98)
T ss_dssp             SCSSC
T ss_pred             CCCCC
Confidence            66544

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.36  E-value=5.6e-13  Score=92.78  Aligned_cols=55  Identities=31%  Similarity=0.637  Sum_probs=25.3

Q ss_pred             CCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcCcccccChhHHHHHHHc
Q psy7466         189 SGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLE  246 (338)
Q Consensus       189 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~  246 (338)
                      .+.++|.|..|++.|.+...|..|+ +.|.+  +++|.|.+|++.|.....|..|+++
T Consensus        13 ~~~~~~~C~~C~k~f~~~~~l~~H~-~~H~~--~~~~~C~~C~k~f~~~~~L~~H~~~   67 (74)
T 2lce_A           13 HSDKPYKCDRCQASFRYKGNLASHK-TVHTG--EKPYRCNICGAQFNRPANLKTHTRI   67 (74)
T ss_dssp             CCCCSBCCTTSSCCBSCHHHHHHHH-HHHCC--CCSEECTTTCCEESCHHHHHHHHHH
T ss_pred             CCCCCeECCCCCceeCCHHHHHHHH-HHcCC--CCCEECCCCCchhCCHHHHHHHHHh
Confidence            3344444444444444444444444 44444  4444444444444444444444443

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.35  E-value=4.3e-13  Score=93.35  Aligned_cols=56  Identities=14%  Similarity=0.202  Sum_probs=52.2

Q ss_pred             ccccccccchhhHhhhcChHHHHHHHHHhcCCCccccccccccccChhhHHHHHHH
Q psy7466         108 KKDEILLMKALDEEMFKMDEENNKEMERISQGLEYQCSVCSQVFIEKKNLSKHFFK  163 (338)
Q Consensus       108 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~  163 (338)
                      ..+.++|.|..|++.|.....|..|++.|++.++|.|.+|++.|.....|..|+++
T Consensus        12 ~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~   67 (74)
T 2lce_A           12 THSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRI   67 (74)
T ss_dssp             CCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHh
Confidence            44578899999999999999999999999999999999999999999999999843

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.35  E-value=1e-12  Score=92.23  Aligned_cols=61  Identities=25%  Similarity=0.554  Sum_probs=55.5

Q ss_pred             cccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcCcccccChhHHHHHHHcC
Q psy7466         186 FTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLEK  247 (338)
Q Consensus       186 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~  247 (338)
                      ++|+++++|.|.+|++.|.....|..|++..|.+. .++|.|++|++.|.....|..|+++.
T Consensus         8 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~-~~~~~C~~C~~~f~~~~~L~~H~~~~   68 (77)
T 2ct1_A            8 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN-VAKFHCPHCDTVIARKSDLGVHLRKQ   68 (77)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSS-CSSEECSSSSCEESSHHHHHHHHHHT
T ss_pred             cccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCC-CCccCCCCCCCccCCHHHHHHHHHHh
Confidence            89999999999999999999999999994478761 38999999999999999999999873

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.35  E-value=6.8e-13  Score=94.65  Aligned_cols=57  Identities=21%  Similarity=0.416  Sum_probs=32.8

Q ss_pred             ccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcCcccccChhHHHHHHHc
Q psy7466         187 TQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLE  246 (338)
Q Consensus       187 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~  246 (338)
                      .+...++|.|++||+.|.+...|..|+ +.|.+  ++||.|.+|++.|.....|..|++.
T Consensus        22 ~~~~~~~h~C~~Cgk~F~~~~~L~~H~-~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~   78 (85)
T 2lv2_A           22 LSASAECHLCPVCGESFASKGAQERHL-RLLHA--AQVFPCKYCPATFYSSPGLTRHINK   78 (85)
T ss_dssp             SCCCCTTEECTTSCCEESSHHHHHHHH-HTTSC--SSSEECTTSSCEESSHHHHHHHHHT
T ss_pred             CCCCCCCEECCCCCCCcCcHHHHhhhh-hhccC--CCccCCCCCCCEeCCHHHHHHhCcc
Confidence            344445566666666666666666665 55555  5566666666666666666666543

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.33  E-value=1.7e-12  Score=89.80  Aligned_cols=58  Identities=36%  Similarity=0.576  Sum_probs=45.2

Q ss_pred             cccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcCcccccChhHHHHHHHc
Q psy7466         186 FTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLE  246 (338)
Q Consensus       186 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~  246 (338)
                      .+|.++++|.|.+|++.|.....|..|+ +.|.+  +++|.|.+|++.|.....|..|+++
T Consensus         7 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~h~~--~~~~~C~~C~~~f~~~~~L~~H~~~   64 (72)
T 1x6e_A            7 GIHSGEKPYGCVECGKAFSRSSILVQHQ-RVHTG--EKPYKCLECGKAFSQNSGLINHQRI   64 (72)
T ss_dssp             CTTTTCCCEECSSSCCEESSHHHHHHHH-HGGGC--SCCEECSSSCCEESSHHHHHHHHHH
T ss_pred             cccCCCCCccCCCCCCccCCHHHHHHHH-HhcCC--CCCeECCCCCcccCCHHHHHHHHHh
Confidence            5677778888888888888888888887 67776  6777777777777777777777765

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.32  E-value=9.1e-13  Score=89.45  Aligned_cols=59  Identities=24%  Similarity=0.558  Sum_probs=44.1

Q ss_pred             cccCCCcceeccccccccCChHHHHHHHhhhc-cCCCCCceecCcCcccccChhHHHHHHHc
Q psy7466         186 FTQSGRSSFKCAICFEYFSLLESLETHITRRH-IGICEEPYQCSQCSLCFDQGSLLKAHVLE  246 (338)
Q Consensus       186 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H-~~~~~~~~~C~~C~~~f~~~~~l~~H~~~  246 (338)
                      .+|.++++|.|+.|++.|.+...|..|++..| .+  +++|.|+.|++.|.+...|..|+++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~--~~~~~C~~C~k~f~~~~~L~~H~~~   62 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRN--VKVYPCPFCFKEFTRKDNMTAHVKI   62 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSS--CCCEECTTTCCEESCHHHHHHHHHH
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCC--CcCeECCCCCCccCCHHHHHHHHHH
Confidence            56777788888888888888888888873336 45  6777887777777777777777765

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.32  E-value=9.4e-13  Score=86.55  Aligned_cols=54  Identities=15%  Similarity=0.202  Sum_probs=49.5

Q ss_pred             cccccchhhHhhhcChHHHHHHHHHhcCCCccccccccccccChhhHHHHHHHh
Q psy7466         111 EILLMKALDEEMFKMDEENNKEMERISQGLEYQCSVCSQVFIEKKNLSKHFFKC  164 (338)
Q Consensus       111 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h  164 (338)
                      +++|.|..|++.|.+...|..|++.|++++||.|++|++.|.+...|..|+++|
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h   55 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERH   55 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHH
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHh
Confidence            578999999999999999999999999999999999999999999999999765

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.31  E-value=5.6e-13  Score=92.26  Aligned_cols=60  Identities=28%  Similarity=0.448  Sum_probs=41.5

Q ss_pred             HhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceeccccccccCChHHHHHHHh
Q psy7466         135 RISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAICFEYFSLLESLETHIT  214 (338)
Q Consensus       135 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  214 (338)
                      +|.++++|.|++|++.|.....|..|+                        ..|.++++|.|.+|++.|.....|..|+ 
T Consensus         8 ~H~~~k~~~C~~C~k~f~~~~~L~~H~------------------------~~h~~~~~~~C~~C~~~f~~~~~L~~H~-   62 (72)
T 1x6e_A            8 IHSGEKPYGCVECGKAFSRSSILVQHQ------------------------RVHTGEKPYKCLECGKAFSQNSGLINHQ-   62 (72)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHH------------------------HGGGCSCCEECSSSCCEESSHHHHHHHH-
T ss_pred             ccCCCCCccCCCCCCccCCHHHHHHHH------------------------HhcCCCCCeECCCCCcccCCHHHHHHHH-
Confidence            466667777777777777777777776                        4556666777777777777777777776 


Q ss_pred             hhccC
Q psy7466         215 RRHIG  219 (338)
Q Consensus       215 ~~H~~  219 (338)
                      +.|.+
T Consensus        63 ~~H~~   67 (72)
T 1x6e_A           63 RIHTS   67 (72)
T ss_dssp             HHHHS
T ss_pred             HhcCC
Confidence            55654

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.31  E-value=1.1e-12  Score=86.13  Aligned_cols=53  Identities=34%  Similarity=0.659  Sum_probs=32.9

Q ss_pred             CcceeccccccccCChHHHHHHHhhhccCCCCCceecCcCcccccChhHHHHHHHc
Q psy7466         191 RSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLE  246 (338)
Q Consensus       191 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~  246 (338)
                      +++|.|.+|++.|.+...|..|+ ..|.+  ++||.|++|++.|.....|..|+++
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~-~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~   54 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHL-RTHTG--EKPYKCEFCEYAAAQKTSLRYHLER   54 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHH-HHHHC--CCCEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCCccCCCCcchhCChHHHHHHH-HHcCC--CCCcCCCCCcchhCCHHHHHHHHHH
Confidence            35666666666666666666666 55665  5666666666666666666666654

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.31  E-value=1.7e-12  Score=89.27  Aligned_cols=56  Identities=30%  Similarity=0.448  Sum_probs=32.6

Q ss_pred             cCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcCcccccChhHHHHHHHc
Q psy7466         188 QSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLE  246 (338)
Q Consensus       188 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~  246 (338)
                      |.++++|.|.+|++.|.+...|..|+ ..|.+  +++|.|.+|++.|.....|..|+++
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~--~~~~~C~~C~~~f~~~~~L~~H~~~   59 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHE-RIHCT--DRPFKCNYCSFDTKQPSNLSKHMKK   59 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHH-GGGCC--SCSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHH-HHcCC--CCCEeCCCCCCccCCHHHHHHHHHH
Confidence            44555566666666666666666665 44555  5556666666666666666666554

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=3.5e-12  Score=89.62  Aligned_cols=61  Identities=23%  Similarity=0.384  Sum_probs=43.6

Q ss_pred             CCceecCcCcccccChhHHHHHHHcC-----CCceecccccccccChhhHHHHhhccCCCCCCcccc
Q psy7466         222 EEPYQCSQCSLCFDQGSLLKAHVLEK-----HEVFQCTQCEKYYRSQSTLDVHVSKKHPAGTGKVKR  283 (338)
Q Consensus       222 ~~~~~C~~C~~~f~~~~~l~~H~~~~-----~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~C  283 (338)
                      +++|.|.+|++.|.....|..|++++     .++|.|.+|++.|.....|..|++..| .+..+...
T Consensus         5 ~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H-~~~~~~~~   70 (78)
T 2d9h_A            5 SSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSH-PALLLAPQ   70 (78)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTS-TTTSSCCS
T ss_pred             CcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhC-CCCCCCcc
Confidence            66777777777777777777776652     567888888888888888888866777 66665543

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.30  E-value=3.8e-12  Score=87.47  Aligned_cols=62  Identities=26%  Similarity=0.409  Sum_probs=53.8

Q ss_pred             hccCCCCCceecCcCcccccChhHHHHHHHc--CCCceecccccccccChhhHHHHhhccCCCCCCcc
Q psy7466         216 RHIGICEEPYQCSQCSLCFDQGSLLKAHVLE--KHEVFQCTQCEKYYRSQSTLDVHVSKKHPAGTGKV  281 (338)
Q Consensus       216 ~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~--~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~  281 (338)
                      .|.+  +++|.|.+|++.|.....|..|+++  +.++|.|++|++.|.+...|..| ++.| .++++.
T Consensus         3 s~~~--~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H-~~~h-~~~~p~   66 (70)
T 1x5w_A            3 SGSS--GHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKH-MKKF-HGDMSG   66 (70)
T ss_dssp             SCCC--CCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHH-HHHH-HSSSCC
T ss_pred             CCCC--CCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHH-HHHH-hCCCCC
Confidence            3555  8999999999999999999999988  67899999999999999999999 5556 455543

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.27  E-value=5e-12  Score=83.98  Aligned_cols=51  Identities=24%  Similarity=0.554  Sum_probs=22.8

Q ss_pred             ceecCcCcccccChhHHHHHHHc--CCCceecccccccccChhhHHHHhhccC
Q psy7466         224 PYQCSQCSLCFDQGSLLKAHVLE--KHEVFQCTQCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       224 ~~~C~~C~~~f~~~~~l~~H~~~--~~~~~~C~~C~k~f~~~~~L~~H~~~~H  274 (338)
                      ||.|+.|++.|.+...|..|+++  +.++|.|++|++.|.+...|..|++..|
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H   54 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH   54 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTS
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHc
Confidence            34444444444444444444433  2334444444444444444444433444

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.26  E-value=1.8e-12  Score=87.95  Aligned_cols=55  Identities=25%  Similarity=0.698  Sum_probs=37.3

Q ss_pred             HhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccc-c-CCCcceeccccccccCChHHHHHH
Q psy7466         135 RISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFT-Q-SGRSSFKCAICFEYFSLLESLETH  212 (338)
Q Consensus       135 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~-h-~~~~~~~C~~C~~~f~~~~~l~~H  212 (338)
                      +|.+++||.|+.|++.|.+...|..|+                        .. | .++++|.|++|++.|.+...|..|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~------------------------~~~H~~~~~~~~C~~C~k~f~~~~~L~~H   59 (66)
T 2drp_A            4 TKEGEHTYRCKVCSRVYTHISNFCRHY------------------------VTSHKRNVKVYPCPFCFKEFTRKDNMTAH   59 (66)
T ss_dssp             EEEETTEEECTTTCCEESSHHHHHHHH------------------------HHHSSSSCCCEECTTTCCEESCHHHHHHH
T ss_pred             ccCCCcceECCCCcchhCCHHHHHHHH------------------------HHHcCCCCcCeECCCCCCccCCHHHHHHH
Confidence            456666777777777777777777776                        22 4 456667777777777777777777


Q ss_pred             H
Q psy7466         213 I  213 (338)
Q Consensus       213 ~  213 (338)
                      +
T Consensus        60 ~   60 (66)
T 2drp_A           60 V   60 (66)
T ss_dssp             H
T ss_pred             H
Confidence            6

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.26  E-value=3.4e-12  Score=89.71  Aligned_cols=63  Identities=24%  Similarity=0.366  Sum_probs=35.6

Q ss_pred             hcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceeccccccccCChHHHHHHHhh
Q psy7466         136 ISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAICFEYFSLLESLETHITR  215 (338)
Q Consensus       136 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  215 (338)
                      |+++++|.|.+|++.|.....|..|+++|..                     ..++++|.|.+|++.|.....|..|++.
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~---------------------~~~~~~~~C~~C~k~f~~~~~L~~H~~~   60 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAE---------------------TVAALRFPCEFCGKRFEKPDSVAAHRSK   60 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHH---------------------HTTTCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhc---------------------cCCCcccCCCCCCchhCCHHHHHHHHHH
Confidence            4556666666666666666666666532210                     0024556666666666666666666645


Q ss_pred             hccC
Q psy7466         216 RHIG  219 (338)
Q Consensus       216 ~H~~  219 (338)
                      .|.+
T Consensus        61 ~H~~   64 (78)
T 2d9h_A           61 SHPA   64 (78)
T ss_dssp             TSTT
T ss_pred             hCCC
Confidence            5554

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=2.3e-14  Score=99.44  Aligned_cols=70  Identities=20%  Similarity=0.281  Sum_probs=52.5

Q ss_pred             HHHHHHHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceeccccccccCCh
Q psy7466         127 EENNKEMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAICFEYFSLL  206 (338)
Q Consensus       127 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C~~~f~~~  206 (338)
                      ..|..|++.|.+.++|.|++|++.|.+...|..                               +++|.|.+|++.|...
T Consensus         4 ~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------------------------------~~~~~C~~C~~~f~~~   52 (73)
T 2ctu_A            4 GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------------------------------RKTPMCEKCRKDSCQE   52 (73)
T ss_dssp             CSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------------------------------SSSCCCHHHHHTCSCC
T ss_pred             hhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------------------------------CCCCCCCCCChhhcCH
Confidence            456677777888888888888888877666443                               3568888888888888


Q ss_pred             HHHHHHHhhhccCCCCCceecCcC
Q psy7466         207 ESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       207 ~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      ..|..|+ ..|.+  +++|.|++|
T Consensus        53 ~~l~~H~-~~H~~--~~~~~C~~C   73 (73)
T 2ctu_A           53 AALNKDE-GNESG--KKTSGPSSG   73 (73)
T ss_dssp             CSSCCCS-SCCCC--CCCSSCCCC
T ss_pred             HHHHHHH-HhhcC--CCCCCCCCC
Confidence            8888887 77777  778888776

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.24  E-value=7.4e-12  Score=83.11  Aligned_cols=55  Identities=24%  Similarity=0.680  Sum_probs=30.7

Q ss_pred             ccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceeccccccccCChHHHHHHHhhhccC
Q psy7466         141 EYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       141 ~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      ||.|+.|++.|.+...|..|+                        ..|.++++|.|++|++.|.+...|..|++..|.+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~------------------------~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~   56 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHY------------------------RSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG   56 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHH------------------------HTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             cCcCCCCccccCCHHHHHHHH------------------------HHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCC
Confidence            455555555555555555554                        3455555555555555555555555554344543

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.23  E-value=8.5e-12  Score=81.86  Aligned_cols=50  Identities=28%  Similarity=0.586  Sum_probs=26.0

Q ss_pred             eeccccccccCChHHHHHHHhhhccCCCCCceecCcCcccccChhHHHHHHHc
Q psy7466         194 FKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLE  246 (338)
Q Consensus       194 ~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~  246 (338)
                      |.|.+|++.|.+...|..|+ ..|.+  +++|.|++|++.|.+...|..|+++
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~-~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~   51 (57)
T 1bbo_A            2 YICEECGIRXKKPSMLKKHI-RTHTD--VRPYHCTYCNFSFKTKGNLTKHMKS   51 (57)
T ss_dssp             CBCTTTCCBCSSHHHHHHHH-HHTSS--CCCEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcCCCCcCcCCCHHHHHHHH-HhcCC--CCCccCCCCCchhcCHHHHHHHHHH
Confidence            45555555555555555555 44444  4555555555555555555555544

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.22  E-value=1.4e-11  Score=80.82  Aligned_cols=54  Identities=26%  Similarity=0.601  Sum_probs=48.8

Q ss_pred             ceecCcCcccccChhHHHHHHHc--CCCceecccccccccChhhHHHHhhccCCCCCC
Q psy7466         224 PYQCSQCSLCFDQGSLLKAHVLE--KHEVFQCTQCEKYYRSQSTLDVHVSKKHPAGTG  279 (338)
Q Consensus       224 ~~~C~~C~~~f~~~~~l~~H~~~--~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~  279 (338)
                      ||.|..|++.|.....|..|+++  +.++|.|+.|++.|.+...|..| ++.| .+++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h-~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKH-MKSK-AHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHH-HHSS-SSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHH-HHHh-cccC
Confidence            68999999999999999999988  67899999999999999999999 6777 5543

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.20  E-value=1e-11  Score=85.92  Aligned_cols=57  Identities=30%  Similarity=0.649  Sum_probs=29.0

Q ss_pred             cccCCCcceecc--ccccccCChHHHHHHHhhhccCCCCCceecCcCcccccChhHHHHHHH
Q psy7466         186 FTQSGRSSFKCA--ICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVL  245 (338)
Q Consensus       186 ~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~  245 (338)
                      ..+.+.++|.|+  .|++.|.....|..|+ ..|.+  +++|.|++|++.|.....|..|++
T Consensus        12 ~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~-~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~   70 (73)
T 1f2i_G           12 YVVPKMRPYACPVESCDRRFSRSDELTRHI-RIHTG--QKPFQCRICMRNFSRSDHLTTHIR   70 (73)
T ss_dssp             CCCCCCCCEECSSTTBCCEESSHHHHHHHH-HHHHC--CCCEECTTTCCEESCHHHHHHHHT
T ss_pred             ccCCCCCccCCcCCCCCCccCCHHHHHHHH-HhhCC--CCCeECCCCCchhCCHHHHHHHHH
Confidence            344455555554  2555555555555554 44544  445555555555555555555543

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.19  E-value=1.9e-11  Score=84.53  Aligned_cols=65  Identities=22%  Similarity=0.496  Sum_probs=55.1

Q ss_pred             HHHHHHHhhhccCCCCCceecC--cCcccccChhHHHHHHHc--CCCceecccccccccChhhHHHHhhccC
Q psy7466         207 ESLETHITRRHIGICEEPYQCS--QCSLCFDQGSLLKAHVLE--KHEVFQCTQCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       207 ~~l~~H~~~~H~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~--~~~~~~C~~C~k~f~~~~~L~~H~~~~H  274 (338)
                      ..|..|+...|.+  +++|.|+  .|++.|.....|..|+++  +.++|.|++||+.|.+...|..| ++.|
T Consensus         4 ~~~~~~~~~~~~~--~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~H   72 (73)
T 1f2i_G            4 HPMNNLLNYVVPK--MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTH-IRTH   72 (73)
T ss_dssp             ----CTTSCCCCC--CCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHH-HTTC
T ss_pred             CCccchhhccCCC--CCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHH-HHhc
Confidence            3456676666777  8999997  599999999999999887  78899999999999999999999 7777

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.11  E-value=4.6e-11  Score=87.11  Aligned_cols=62  Identities=24%  Similarity=0.296  Sum_probs=45.0

Q ss_pred             ccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcc--------eeccccccccCChHHHHHH
Q psy7466         141 EYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSS--------FKCAICFEYFSLLESLETH  212 (338)
Q Consensus       141 ~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~--------~~C~~C~~~f~~~~~l~~H  212 (338)
                      .|.|..|++.|.+...|..|+++                       .|.+.++        |.|.+|++.|.....|..|
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~-----------------------~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H   81 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTM-----------------------EHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNH   81 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHH-----------------------TTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHH
T ss_pred             CCcccccccccCCHHHHHHHHHH-----------------------hccCCCCCCccceeccCCCCCCcccCCHHHHHHH
Confidence            45788888888888888888632                       1555554        7788888888888888888


Q ss_pred             HhhhccCCCCCceecC
Q psy7466         213 ITRRHIGICEEPYQCS  228 (338)
Q Consensus       213 ~~~~H~~~~~~~~~C~  228 (338)
                      + +.|.+  ++||.|.
T Consensus        82 ~-~~H~~--~k~~~C~   94 (95)
T 2ej4_A           82 I-RVHTG--EKSGPSS   94 (95)
T ss_dssp             H-HHHHT--CCCCSSC
T ss_pred             H-HhcCC--CCCCCCC
Confidence            7 67777  7777775

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=5.3e-11  Score=80.64  Aligned_cols=51  Identities=20%  Similarity=0.326  Sum_probs=24.5

Q ss_pred             CCceecCcCcccccChhHHHHHHHc-CCCceecc-cccccccChhhHHHHhhccC
Q psy7466         222 EEPYQCSQCSLCFDQGSLLKAHVLE-KHEVFQCT-QCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       222 ~~~~~C~~C~~~f~~~~~l~~H~~~-~~~~~~C~-~C~k~f~~~~~L~~H~~~~H  274 (338)
                      ++||.|..|++.|. ...|..|+++ +++||.|+ .||+.|.....|..| ++.|
T Consensus         8 ~~~~~C~~C~k~f~-~~~L~~H~~~~~~~p~~C~~~C~k~f~~~~~L~~H-~~~h   60 (66)
T 2eod_A            8 KRTQPCTYCTKEFV-FDTIQSHQYQCPRLPVACPNQCGVGTVAREDLPGH-LKDS   60 (66)
T ss_dssp             CCEEECSSSCCEEE-HHHHHHHHHHCSSSEEECTTCCSCCEEETTTHHHH-HHTT
T ss_pred             CCCeeccccCCccC-HHHHHHHHHHcCCcCccCCcccCcccccHHHHHHH-HHhh
Confidence            34444444444444 4444444433 34445555 455555555555555 3444

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.08  E-value=8.9e-11  Score=76.11  Aligned_cols=45  Identities=16%  Similarity=0.266  Sum_probs=36.2

Q ss_pred             CCCceecccccccccChhhHHHHhhccCCCCCCccccCCCCCCCCC
Q psy7466         247 KHEVFQCTQCEKYYRSQSTLDVHVSKKHPAGTGKVKRDIKPNTNIL  292 (338)
Q Consensus       247 ~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~C~~C~~~f~~  292 (338)
                      +.++|.|++|++.|.....|..|++..| .++++|.|.+|++.|.+
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~~H-~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            9 VGKPYICQSCGKGFSRPDHLNGHIKQVH-TSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTS-CCCCCCCSSSSCCSSCC
T ss_pred             CCCCeECCCCCcccCCHHHHHHHHHHhc-CCCCCccCCCCCCCCCC
Confidence            5677888888888888888888844578 88888888888888875

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.08  E-value=4.6e-11  Score=87.09  Aligned_cols=63  Identities=19%  Similarity=0.175  Sum_probs=57.1

Q ss_pred             cccccchhhHhhhcChHHHHHHHHH-hcCCCc--------cccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhh
Q psy7466         111 EILLMKALDEEMFKMDEENNKEMER-ISQGLE--------YQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFK  181 (338)
Q Consensus       111 ~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~  181 (338)
                      ...|.|..|++.|.....|..|++. |.+..+        |.|.+|++.|.+...|..|+                    
T Consensus        23 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~--------------------   82 (95)
T 2ej4_A           23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHI--------------------   82 (95)
T ss_dssp             CSSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHH--------------------
T ss_pred             cCCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHH--------------------
Confidence            4457899999999999999999998 888877        99999999999999999998                    


Q ss_pred             hhcccccCCCcceecc
Q psy7466         182 CLMKFTQSGRSSFKCA  197 (338)
Q Consensus       182 c~~~~~h~~~~~~~C~  197 (338)
                          ++|++++||.|.
T Consensus        83 ----~~H~~~k~~~C~   94 (95)
T 2ej4_A           83 ----RVHTGEKSGPSS   94 (95)
T ss_dssp             ----HHHHTCCCCSSC
T ss_pred             ----HhcCCCCCCCCC
Confidence                667888999986

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.04  E-value=2e-10  Score=74.46  Aligned_cols=49  Identities=24%  Similarity=0.344  Sum_probs=41.9

Q ss_pred             cccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcCcccccC
Q psy7466         186 FTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQ  236 (338)
Q Consensus       186 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~~~f~~  236 (338)
                      ..|.++++|.|.+|++.|.....|..|++..|.+  +++|.|.+|++.|.+
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~--~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            5 SSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTS--ERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHHHTSCC--CCCCCSSSSCCSSCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHhcCC--CCCccCCCCCCCCCC
Confidence            4577888999999999999999999998338888  889999999999875

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=1.1e-10  Score=79.13  Aligned_cols=53  Identities=23%  Similarity=0.507  Sum_probs=35.7

Q ss_pred             CCCcceeccccccccCChHHHHHHHhhhccCCCCCceecC-cCcccccChhHHHHHHHc
Q psy7466         189 SGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCS-QCSLCFDQGSLLKAHVLE  246 (338)
Q Consensus       189 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~-~C~~~f~~~~~l~~H~~~  246 (338)
                      .+.+||.|..|++.|. ...|..|+ +. .+  ++||.|+ .|++.|.....|..|+++
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~-~~-~~--~~p~~C~~~C~k~f~~~~~L~~H~~~   59 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQ-YQ-CP--RLPVACPNQCGVGTVAREDLPGHLKD   59 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHH-HH-CS--SSEEECTTCCSCCEEETTTHHHHHHT
T ss_pred             CCCCCeeccccCCccC-HHHHHHHH-HH-cC--CcCccCCcccCcccccHHHHHHHHHh
Confidence            4556677777777777 77777776 44 44  6677777 677777777777777665

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.03  E-value=9.4e-11  Score=80.81  Aligned_cols=57  Identities=12%  Similarity=0.137  Sum_probs=51.4

Q ss_pred             ccccccccchh--hHhhhcChHHHHHHHHHhcCCCcccccc--ccccccChhhHHHHHHHh
Q psy7466         108 KKDEILLMKAL--DEEMFKMDEENNKEMERISQGLEYQCSV--CSQVFIEKKNLSKHFFKC  164 (338)
Q Consensus       108 ~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h  164 (338)
                      ....++|.|..  |++.|.....|..|++.|+++++|.|.+  |++.|.....|..|+++|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            34567899998  9999999999999999999999999976  999999999999998543

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=2e-10  Score=71.71  Aligned_cols=44  Identities=27%  Similarity=0.439  Sum_probs=39.4

Q ss_pred             cccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         184 MKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       184 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      |+++|+++++|.|.+|++.|.....|..|+ +.|.+  ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~--~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQ-KIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHG-GGTSC--SSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHH-HHhCC--CCCCCCCCC
Confidence            347889999999999999999999999998 88988  899999887

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=2.2e-10  Score=71.42  Aligned_cols=43  Identities=30%  Similarity=0.526  Sum_probs=39.2

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      +++|+++++|.|++|++.|.....|..|+ +.|.+  ++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~~~~~C~~C   46 (46)
T 2eml_A            4 GSSGTGEKPYECSVCGKAFSHRQSLSVHQ-RIHSG--KKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCSEECSSSCCEESSHHHHHHHH-GGGSS--CCCSCSSCC
T ss_pred             cCCcCCCCCeeCCCcCCccCCHHHHHHHH-HHhcC--CCCCCCCCC
Confidence            47899999999999999999999999998 88988  899999887

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=2.2e-10  Score=71.46  Aligned_cols=43  Identities=28%  Similarity=0.449  Sum_probs=39.1

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      +.+|+++++|.|.+|++.|.....|..|+ +.|.+  ++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~--~k~~~C~~C   46 (46)
T 2ytn_A            4 GSSGTGKKPYKCNECGKVFTQNSHLARHR-GIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCSSCBCTTTCCBCSSHHHHHHHG-GGTSC--CCCCSCCCC
T ss_pred             CcCCCCCcCeECCCCCCeeCCHHHHHHHh-hhcCC--CCCCCCCCC
Confidence            47889999999999999999999999998 88988  899999887

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=2e-10  Score=70.89  Aligned_cols=43  Identities=30%  Similarity=0.398  Sum_probs=38.5

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      +++|+++++|.|.+||+.|.....|..|+ +.|.+  +++|.|.+|
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~~~~~C~~C   44 (44)
T 2emx_A            2 SSGSSGEKPFGCSCCEKAFSSKSYLLVHQ-QTHAE--EKPSGPSSG   44 (44)
T ss_dssp             CCCCSSCCCEECSSSSCEESSHHHHHHHH-HHHTS--SCSCSCCCC
T ss_pred             CCCcCCCcCccCCCCCcccCCHHHHHHHH-HHhCC--CCCCCCCCC
Confidence            47888999999999999999999999998 78888  889999887

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=2.1e-10  Score=71.49  Aligned_cols=44  Identities=30%  Similarity=0.431  Sum_probs=39.4

Q ss_pred             cccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         184 MKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       184 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      |+++|+++++|.|++|++.|.....|..|+ +.|.+  ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQ-RIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHH-TTTCC--CCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHH-hhcCC--CCCCCCCCC
Confidence            347889999999999999999999999998 88988  899999887

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.02  E-value=2.4e-10  Score=71.25  Aligned_cols=43  Identities=30%  Similarity=0.475  Sum_probs=39.3

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      +.+|+++++|.|.+|++.|.....|..|+ +.|.+  ++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~k~~~C~~C   46 (46)
T 2el4_A            4 GSSGTGVKPYGCSQCAKTFSLKSQLIVHQ-RSHTG--VKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCSEECSSSSCEESSHHHHHHHG-GGSSS--CCCSCCTTC
T ss_pred             ccCCCCCCceECCCCCchhCCHHHHHHHH-HHhCC--CCCCCCCCC
Confidence            47899999999999999999999999998 88988  899999987

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=2.3e-10  Score=71.39  Aligned_cols=44  Identities=25%  Similarity=0.316  Sum_probs=39.6

Q ss_pred             cccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         184 MKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       184 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      |+++|+++++|.|.+|++.|.....|..|+ +.|.+  ++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~--~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQ-RVHMG--EKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHG-GGGGS--CCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHH-HhcCC--CCCCCCCCC
Confidence            347899999999999999999999999998 88988  899999887

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.01  E-value=2.3e-10  Score=71.31  Aligned_cols=43  Identities=33%  Similarity=0.467  Sum_probs=39.1

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      +++|+++++|.|++|++.|.....|..|+ +.|.+  ++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~--~~~~~C~~C   46 (46)
T 2em0_A            4 GSSGMGEKTWKCRECDMCFSQASSLRLHQ-NVHVG--EKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCCCCSSSCCCCSSHHHHHHHG-GGGSS--SSCSCSSCC
T ss_pred             cCccCCCcCeECCCCCcccCCHHHHHHHH-HHcCC--CCCcCCCCC
Confidence            47899999999999999999999999998 88988  899999887

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=2.4e-10  Score=71.25  Aligned_cols=43  Identities=30%  Similarity=0.413  Sum_probs=38.8

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      +++|+++++|.|.+|++.|.....|..|+ +.|.+  ++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~~~~~C~~C   46 (46)
T 2eq4_A            4 GSSGTGEKLYNCKECGKSFSRAPCLLKHE-RLHSG--EKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCCCCBTTTTBCCSCHHHHHHHH-HHCCS--SSCCCCCCC
T ss_pred             cccCCCCCCeECCCCCCccCchHHHHHHH-HhcCC--CCCCCCCCC
Confidence            47889999999999999999999999998 88988  899999887

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=2.6e-10  Score=71.14  Aligned_cols=44  Identities=30%  Similarity=0.379  Sum_probs=39.8

Q ss_pred             cccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         184 MKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       184 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      |+.+|+++++|.|.+|++.|.....|..|+ +.|.+  ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHH-MVHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHG-GGGTT--CCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHH-HHhCC--CCCCCCCCC
Confidence            347899999999999999999999999998 88988  899999987

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=2.4e-10  Score=71.25  Aligned_cols=43  Identities=28%  Similarity=0.404  Sum_probs=39.2

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      +.+|+++++|.|.+|++.|.....|..|+ +.|.+  ++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~--~k~~~C~~c   46 (46)
T 2eq0_A            4 GSSGTGEKPYKCHECGKVFRRNSHLARHQ-LIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCEECTTTCCEESSHHHHHHHH-TTTCC--CCCSCCSCC
T ss_pred             CcCCCCCCCeECCCCCchhCCHHHHHHHH-HHcCC--CCCCCCCCC
Confidence            47889999999999999999999999998 88988  899999987

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=2.4e-10  Score=71.27  Aligned_cols=43  Identities=28%  Similarity=0.442  Sum_probs=39.2

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      +.+|+++++|.|.+|++.|.....|..|+ +.|.+  ++||.|++|
T Consensus         4 ~~~H~~~~~~~C~~C~k~F~~~~~L~~H~-~~H~~--~~~~~C~~C   46 (46)
T 2eoe_A            4 GSSGTGEKPYKCNECGKVFTQNSHLANHQ-RIHTG--VKPSGPSSG   46 (46)
T ss_dssp             SSCCCCCCSSEETTTTEECSSHHHHHHHH-GGGSC--CCSCSSCCC
T ss_pred             CCCCCCCCCeECCCcChhhCCHHHHHHHH-HHcCC--CCCCCCCCC
Confidence            47889999999999999999999999998 88988  899999987

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=2.2e-10  Score=71.40  Aligned_cols=43  Identities=30%  Similarity=0.391  Sum_probs=38.8

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      +++|+++++|.|.+|++.|.....|..|+ +.|.+  ++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~k~~~C~~C   46 (46)
T 2emm_A            4 GSSGTGERPHKCNECGKSFIQSAHLIQHQ-RIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CSCSSCCCSEECSSSCCEESSHHHHHHHH-HHHSC--CCTTSSSCC
T ss_pred             cCCcCCCCCeeCCCCChhhCCHHHHHHHH-HHhCC--CCCCCCCCC
Confidence            47889999999999999999999999998 88988  899999887

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=2.3e-10  Score=71.33  Aligned_cols=44  Identities=32%  Similarity=0.414  Sum_probs=39.4

Q ss_pred             cccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         184 MKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       184 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      |+++|.++++|.|.+|++.|.....|..|+ +.|.+  ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHR-RIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHH-TTTTT--CCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHH-HHhCC--CCCCCCCCC
Confidence            347889999999999999999999999998 88988  899999887

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.00  E-value=2.6e-10  Score=71.10  Aligned_cols=43  Identities=30%  Similarity=0.466  Sum_probs=39.0

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      +.+|+++++|.|.+|++.|.....|..|+ +.|.+  ++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~k~~~C~~c   46 (46)
T 2ema_A            4 GSSGTGEKRYKCNECGKVFSRNSQLSQHQ-KIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSCCEECSSSCCEESSHHHHHHHH-TGGGC--CCCCSSSCC
T ss_pred             ccCCCCCcCcCCCCCcchhCCHHHHHHHH-HhcCC--CCCCCCCCC
Confidence            47889999999999999999999999998 88988  899999887

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2.9e-10  Score=70.83  Aligned_cols=43  Identities=33%  Similarity=0.482  Sum_probs=39.0

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      +.+|+++++|.|++|++.|.....|..|+ +.|.+  ++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~~~~~C~~C   46 (46)
T 2eme_A            4 GSSGSGEKPYVCDYCGKAFGLSAELVRHQ-RIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCTTCCCCSEECSSSCCEESSHHHHHHHH-GGGCC--CSCCSSCCC
T ss_pred             CCCCCCCCCeECCCCChhhCCHHHHHHHH-HhcCC--CCCCCCCCC
Confidence            47889999999999999999999999998 88988  899999887

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2.6e-10  Score=71.15  Aligned_cols=44  Identities=30%  Similarity=0.437  Sum_probs=39.3

Q ss_pred             cccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         184 MKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       184 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      |+++|+++++|.|.+|++.|.....|..|+ +.|.+  ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHM-RTHSG--EKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHH-TTTCC--SCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHH-HHhCC--CCCCCCCCC
Confidence            347889999999999999999999999998 88988  899999887

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=2.5e-10  Score=71.19  Aligned_cols=43  Identities=33%  Similarity=0.419  Sum_probs=38.9

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      +.+|+++++|.|++|++.|.....|..|+ +.|.+  ++||.|++|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~--~~~~~C~~C   46 (46)
T 2em5_A            4 GSSGSSTKSHQCHECGRGFTLKSHLNQHQ-RIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCSEECSSSCCEESSHHHHHHHH-TTTSC--SCCSSCCCC
T ss_pred             cCCCCCCCCeECCcCCCccCCHHHHHHHH-HHhCC--CCCCCCCCC
Confidence            47889999999999999999999999998 88988  899999887

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.00  E-value=2.2e-10  Score=71.46  Aligned_cols=44  Identities=32%  Similarity=0.462  Sum_probs=39.1

Q ss_pred             cccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         184 MKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       184 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      |+++|+++++|.|.+|++.|.....|..|+ +.|.+  ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHH-KLHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHH-HHHSC--CSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHH-HHcCC--CCCCCCCCC
Confidence            347889999999999999999999999998 78988  899999887

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2.4e-10  Score=71.30  Aligned_cols=43  Identities=30%  Similarity=0.454  Sum_probs=38.7

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      +.+|.++++|.|.+|++.|.....|..|+ +.|.+  ++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~--~k~~~C~~C   46 (46)
T 2emy_A            4 GSSGTGENPYECHECGKAFSRKYQLISHQ-RTHAG--EKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCEECSSSCCEESSHHHHHHHH-HHHTT--SCCSCSSCC
T ss_pred             CCCCCCCcCcCCCCCCcccCcHHHHHHHH-HHcCC--CCCCCCCCC
Confidence            47889999999999999999999999998 88988  899999887

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.00  E-value=2.4e-10  Score=71.26  Aligned_cols=43  Identities=30%  Similarity=0.454  Sum_probs=38.5

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      +.+|+++++|.|++|++.|.....|..|+ +.|.+  ++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~--~k~~~C~~C   46 (46)
T 2emk_A            4 GSSGTGEKPYECKECGKAFSQTTHLIQHQ-RVHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSCSCBCSSSCCBCSCHHHHHHHH-HHHSS--CCCSSCCCC
T ss_pred             CCccCCCCceECCCCCchhCCHHHHHHHH-HHcCC--CCCCCCCCC
Confidence            47888999999999999999999999998 88988  899999887

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2.6e-10  Score=71.11  Aligned_cols=44  Identities=25%  Similarity=0.403  Sum_probs=39.8

Q ss_pred             cccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         184 MKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       184 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      |+++|.++++|.|++|++.|.....|..|+ +.|.+  ++||.|++|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQ-KVHTG--ERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHH-TTSCS--CCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHH-HhhCC--CCCCCCCCC
Confidence            347899999999999999999999999998 88988  899999987

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=3e-10  Score=70.83  Aligned_cols=43  Identities=28%  Similarity=0.506  Sum_probs=38.9

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      +.+|+++++|.|++|++.|.....|..|+ ..|.+  ++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~k~~~C~~c   46 (46)
T 2ep2_A            4 GSSGTGEKPYECSICGKSFTKKSQLHVHQ-QIHTG--EKPSGPSSG   46 (46)
T ss_dssp             SSCSSCCCSEECSSSCCEESSHHHHHHHH-HTTSS--CCSCCSCCC
T ss_pred             CCCCCCCcCcCCCCCCcccCCHHHHHHHH-HHhCC--CCCCCCCCC
Confidence            47889999999999999999999999998 88988  899999887

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.00  E-value=3e-10  Score=70.76  Aligned_cols=43  Identities=28%  Similarity=0.438  Sum_probs=39.3

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      +++|+++++|.|.+|++.|.....|..|+ +.|.+  ++||.|.+|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~~~~~C~~C   46 (46)
T 2em9_A            4 GSSGTGEKPYNCKECGKSFRWASCLLKHQ-RVHSG--EKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSEECSSSCCEESSHHHHHHHG-GGGTS--CCCCSTTCC
T ss_pred             CCCCCCCcCeECCccccccCChHHHHHHH-HHhCC--CCCCCCCCC
Confidence            47899999999999999999999999998 88988  899999987

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2.3e-10  Score=71.39  Aligned_cols=43  Identities=33%  Similarity=0.458  Sum_probs=38.5

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      +.+|+++++|.|.+|++.|.....|..|+ +.|.+  ++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~k~~~C~~C   46 (46)
T 2emp_A            4 GSSGTGVKPYMCNECGKAFSVYSSLTTHQ-VIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CSCSSCCCSEECSSSCCEESCHHHHHHHH-HHHHC--CSCCSCCCC
T ss_pred             ccccCCCcCeECCCCCchhCCHHHHHHHH-HHcCC--CCCCCCCCC
Confidence            47888999999999999999999999998 88888  889999887

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=2.7e-10  Score=70.96  Aligned_cols=43  Identities=30%  Similarity=0.430  Sum_probs=38.7

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      +.+|+++++|.|.+|++.|.....|..|+ +.|.+  ++||.|++|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~--~k~~~C~~C   46 (46)
T 2eop_A            4 GSSGTGEKPHECRECGKSFSFNSQLIVHQ-RIHTG--ENPSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSCBCTTTCCBCSSHHHHHHHH-TTTTT--SCCSCCCCC
T ss_pred             ccccCCCCCeeCCCCCchhCCHHHHHHHH-HHcCC--CCCCCCCCC
Confidence            47889999999999999999999999998 88988  889999887

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=2.6e-10  Score=71.10  Aligned_cols=43  Identities=33%  Similarity=0.490  Sum_probs=38.8

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      +.+|+++++|.|.+|++.|.....|..|+ +.|.+  ++||.|++|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~--~~~~~C~~c   46 (46)
T 2ytk_A            4 GSSGSGEKPYKCNECGKVFTQNSHLTNHW-RIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCSEECSSSCCEESSHHHHHHHH-HHHSS--SSCSSCCCC
T ss_pred             cccCCCCCCEeCCcCCCccCCHHHHHHHH-HHHCC--CCCCCCCCC
Confidence            47889999999999999999999999998 88988  899999887

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=3e-10  Score=70.78  Aligned_cols=43  Identities=23%  Similarity=0.335  Sum_probs=38.8

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      +.+|.++++|.|++||+.|.....|..|+ ..|.+  +++|.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~--~k~~~C~~C   46 (46)
T 2epw_A            4 GSSGTGEKPCKCTECGKAFCWKSQLIMHQ-RTHVD--DKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSEECSSSCCEESSSHHHHHHH-HHCCS--CCCSCCCCC
T ss_pred             cccCCCCCCeeCCCCCCccCCHHHHHHHH-HHhCC--CCCCCCCCC
Confidence            47889999999999999999999999998 88988  899999887

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=2.8e-10  Score=70.94  Aligned_cols=43  Identities=26%  Similarity=0.402  Sum_probs=38.3

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      +.+|+++++|.|++|++.|.....|..|+ +.|.+  ++||.|++|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~--~~~~~C~~C   46 (46)
T 2eov_A            4 GSSGTGEKPYKCSDCGKSFTWKSRLRIHQ-KCHTG--ERHSGPSSG   46 (46)
T ss_dssp             CCCCSSCCSCBCSSSCCBCSSHHHHHHHH-HHHSC--CSSCCSCCC
T ss_pred             CCCCCCCCCccCCccChhhCCHHHHHHHH-HhcCC--CCCCCCCCC
Confidence            47888999999999999999999999998 88888  889999887

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=2.9e-10  Score=70.92  Aligned_cols=43  Identities=30%  Similarity=0.424  Sum_probs=38.9

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      +.+|.++++|.|.+|++.|.....|..|+ +.|.+  ++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~~~~~C~~C   46 (46)
T 2ytd_A            4 GSSGSGEKPYKCSECGKAFHRHTHLNEHR-RIHTG--YRPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCSEECSSSCCEESSHHHHHHHH-HHHTC--CCSSCSSCC
T ss_pred             ccccCCCcCeECCCCCCeeCChHHHHHHH-HHcCC--CCCCCCCCC
Confidence            47889999999999999999999999998 88988  899999887

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=3e-10  Score=70.83  Aligned_cols=43  Identities=23%  Similarity=0.391  Sum_probs=38.5

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      +.+|+++++|.|.+|++.|.....|..|+ ..|.+  ++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~k~~~C~~c   46 (46)
T 2ytj_A            4 GSSGTGEKPYICAECGKAFTIRSNLIKHQ-KIHTK--QKPSGPSSG   46 (46)
T ss_dssp             SCTTSSCCSEECSSSCCEESSHHHHHHHH-HHTSC--CCCSSCSCC
T ss_pred             ccCCCCCcCeECCCCChhhCCHHHHHHHH-HHcCC--CCCCCCCCC
Confidence            47888999999999999999999999998 88988  899999887

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=2.4e-10  Score=71.28  Aligned_cols=43  Identities=26%  Similarity=0.396  Sum_probs=38.4

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      +.+|+++++|.|++||+.|...+.|..|+ +.|.+  +++|.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~--~k~~~C~~C   46 (46)
T 2eoo_A            4 GSSGSGERPYGCNECGKNFGRHSHLIEHL-KRHFR--EKSSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCEECSSSCCEESSHHHHHHHH-HHHHS--TTSSCCSCC
T ss_pred             CCCCCCCCCEEccccCcccCCHHHHHHHH-HHHcC--CCCCCCCCC
Confidence            47888999999999999999999999998 78888  889999887

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=2.3e-10  Score=71.34  Aligned_cols=43  Identities=26%  Similarity=0.441  Sum_probs=38.3

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      +.+|+++++|.|.+|++.|.....|..|+ ..|.+  ++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~--~k~~~C~~c   46 (46)
T 2emh_A            4 GSSGTGERPYICTVCGKAFTDRSNLIKHQ-KIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCSCSCCCSEECTTTCCEESSHHHHHHHH-HHHHC--SSCSSSCCC
T ss_pred             CCCCCCCCCcCCCCCCchhCCHHHHHHHH-HhcCC--CCCCCCCCC
Confidence            47888999999999999999999999998 78888  889999887

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=3.1e-10  Score=70.74  Aligned_cols=43  Identities=30%  Similarity=0.433  Sum_probs=39.2

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      +.+|+++++|.|++|++.|.....|..|+ +.|.+  ++||.|+.|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~--~k~~~C~~C   46 (46)
T 2en8_A            4 GSSGSGEKSHTCDECGKNFCYISALRIHQ-RVHMG--EKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSEECTTTCCEESSHHHHHHHH-TTTCC--SCSSCCSCC
T ss_pred             cccCCCCCCeECCCcCcccCCHHHHHHHH-HHhCC--CCCCCCCCC
Confidence            47889999999999999999999999998 88988  899999887

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=2.7e-10  Score=71.02  Aligned_cols=43  Identities=30%  Similarity=0.427  Sum_probs=38.4

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      +.+|+++++|.|++|++.|.....|..|+ ..|.+  ++||.|++|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~--~k~~~C~~C   46 (46)
T 2eoq_A            4 GSSGTGEKPFKCDICGKSFCGRSRLNRHS-MVHTA--EKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCSCCCSSSCCCCSSHHHHHHHH-HHTTC--CCSSSCCCC
T ss_pred             CCCCCCCCCcCCCcCCchhCCHHHHHHHH-HHcCC--CCCCCCCCC
Confidence            47888999999999999999999999998 88888  889999887

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=3.1e-10  Score=70.73  Aligned_cols=44  Identities=32%  Similarity=0.396  Sum_probs=39.4

Q ss_pred             cccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         184 MKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       184 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      |+++|+++++|.|.+|++.|.....|..|+ +.|.+  ++||.|++|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQ-RSHSG--EKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHH-HHSCC--SSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHH-HHhCC--CCCCCCCCC
Confidence            347889999999999999999999999998 88988  899999887

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.99  E-value=3.6e-10  Score=70.48  Aligned_cols=43  Identities=30%  Similarity=0.379  Sum_probs=39.3

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      +++|+++++|.|.+|++.|.....|..|+ +.|.+  ++||.|.+|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~~~~~C~~C   46 (46)
T 2el6_A            4 GSSGAGVNPYKCSQCEKSFSGKLRLLVHQ-RMHTR--EKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCSEECSSSSCEESSHHHHHHHH-GGGCC--SSCCSCCCC
T ss_pred             CCCCCCCCCeECCCCCcccCCHHHHHHHH-HHcCC--CCCCCCCCC
Confidence            47899999999999999999999999998 88988  899999887

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=2.7e-10  Score=71.00  Aligned_cols=43  Identities=33%  Similarity=0.492  Sum_probs=38.8

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      +++|+++++|.|.+|++.|.....|..|+ +.|.+  ++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~~~~~C~~C   46 (46)
T 2ytr_A            4 GSSGTGEKPYKCNECGKAFSQTSKLARHQ-RIHTG--EKPSGPSSG   46 (46)
T ss_dssp             SCCCSSCCTTCCTTTCCCCSSHHHHHHHH-TTTTT--CSCCCSCCC
T ss_pred             CcCCCCCcCcCCCCCCCccCCHHHHHHHH-HhcCC--CCCCCCCCC
Confidence            47889999999999999999999999998 88988  889999887

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=3.3e-10  Score=70.59  Aligned_cols=43  Identities=35%  Similarity=0.519  Sum_probs=39.1

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      +.+|+++++|.|.+|++.|.....|..|+ ..|.+  ++||.|++|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~--~~~~~C~~C   46 (46)
T 2en1_A            4 GSSGSGEKPFKCEECGKRFTQNSQLHSHQ-RVHTG--EKPSGPSSG   46 (46)
T ss_dssp             TTCCCCCCSEEETTTTEEESSHHHHHHHG-GGGSC--CCCSCCCCC
T ss_pred             ccCCCCCCCeeCCCCCcccCCHHHHHHHH-HHcCC--CCCCCCCCC
Confidence            47889999999999999999999999998 88988  899999887

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=2.5e-10  Score=71.19  Aligned_cols=43  Identities=30%  Similarity=0.468  Sum_probs=39.5

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      +.+|+++++|.|++|++.|.....|..|+ ..|.+  ++||.|++|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~--~k~~~C~~C   46 (46)
T 2ytg_A            4 GSSGTGEKPFKCGECGKSYNQRVHLTQHQ-RVHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCSEECTTTCCEESSSHHHHTTG-GGGSS--CCSSCSCCC
T ss_pred             CCCCCCCCCeECCCCCcccCCHHHHHHHH-HHcCC--CCCCCCCCC
Confidence            47899999999999999999999999998 88988  899999987

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.4e-10  Score=71.29  Aligned_cols=43  Identities=28%  Similarity=0.444  Sum_probs=38.7

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      +.+|+++++|.|.+|++.|.....|..|+ +.|.+  ++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~~~~~C~~C   46 (46)
T 2yu8_A            4 GSSGTGEKPYKCNECGKVFTQNSHLARHR-RVHTG--GKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSEECSSSCCEESSSHHHHHHT-HHHHS--CCCSCSCCC
T ss_pred             CcCCCCCCCeECCcCCchhCCHHHHHHHH-HhcCC--CCCCCCCCC
Confidence            47889999999999999999999999998 88988  899999887

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=3.4e-10  Score=70.55  Aligned_cols=44  Identities=27%  Similarity=0.255  Sum_probs=39.4

Q ss_pred             cccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         184 MKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       184 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      |+.+|.++++|.|.+|++.|.....|..|+ +.|.+  ++||.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~--~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQ-VLHMG--QKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHH-HHHSC--CSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHH-HHhCC--CCCCCCCCC
Confidence            347889999999999999999999999998 88988  899999887

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.9e-10  Score=70.85  Aligned_cols=43  Identities=33%  Similarity=0.470  Sum_probs=39.2

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      +++|+++++|.|.+|++.|.....|..|+ +.|.+  ++||.|++|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~--~k~~~C~~C   46 (46)
T 2en6_A            4 GSSGSGEKPYGCNECGKTFSQKSILSAHQ-RTHTG--EKPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCEEETTTTEEESSHHHHHHHH-HHHSS--CCCSSSCCC
T ss_pred             CCccCCCcCeECCCCCcccCchHHHHHHH-HHcCC--CCCCCCCCC
Confidence            47899999999999999999999999998 88988  899999887

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.5e-10  Score=71.19  Aligned_cols=44  Identities=27%  Similarity=0.378  Sum_probs=38.8

Q ss_pred             cccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         184 MKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       184 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      |+++|+++++|.|.+|++.|.....|..|+ +.|.+  ++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQ-RLHTG--QRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHH-HHHHS--CCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHH-HHcCC--CCCCCCCCC
Confidence            347888999999999999999999999998 88888  889999887

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.98  E-value=5.4e-10  Score=76.93  Aligned_cols=58  Identities=29%  Similarity=0.513  Sum_probs=45.8

Q ss_pred             cccCCCcceeccc--cccccCChHHHHHHHhhhccCCCCCceecCc--CcccccChhHHHHHHHc
Q psy7466         186 FTQSGRSSFKCAI--CFEYFSLLESLETHITRRHIGICEEPYQCSQ--CSLCFDQGSLLKAHVLE  246 (338)
Q Consensus       186 ~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~  246 (338)
                      ......++|.|..  |++.|.....|..|+ ..|.+  +++|.|.+  |++.|.....|..|+++
T Consensus        10 ~~~~~~~~~~C~~~~C~k~f~~~~~L~~H~-~~H~~--~~~~~C~~~~C~k~f~~~~~l~~H~~~   71 (72)
T 2epa_A           10 IDSSRIRSHICSHPGCGKTYFKSSHLKAHT-RTHTG--EKPFSCSWKGCERRFARSDELSRHRRT   71 (72)
T ss_dssp             CCCCCCCCEECSSTTTCCEESSHHHHHHHH-HHHSS--SCSEECCCTTCCCEESSHHHHHHHTTT
T ss_pred             CCccccCceeCCCCCCccccCCHHHHHHHH-HhcCC--CCCccCCCCCCCcccCCHHHHHhHhhc
Confidence            3455667888887  888888888888888 77877  78888865  88888888888888654

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=4.4e-10  Score=70.04  Aligned_cols=43  Identities=30%  Similarity=0.459  Sum_probs=38.7

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      +.+|+++++|.|.+|++.|.....|..|+ +.|.+  ++||.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~~~~~C~~~   46 (46)
T 2ep3_A            4 GSSGTGEKPYRCAECGKAFTDRSNLFTHQ-KIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CSSSSCCCSEECSSSCCEESSHHHHHHHH-TTTTT--SCCCCTTCC
T ss_pred             CCCCCCCCCeECCCCCchhCCHHHHHHHH-HHcCC--CCCCCCCCC
Confidence            47889999999999999999999999998 88988  899999875

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=3.6e-10  Score=70.45  Aligned_cols=43  Identities=28%  Similarity=0.356  Sum_probs=38.6

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      +++|.++++|.|++|++.|.....|..|+ +.|.+  +++|.|++|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~~~~~C~~C   46 (46)
T 2em8_A            4 GSSGSGEKPYKCVECGKGYKRRLDLDFHQ-RVHTG--EKLSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSEECSSSCCEESSHHHHHHHH-HHHHC--CCCCCSCCC
T ss_pred             CCCCCCCCCeECcccCchhCCHHHHHHHH-HHHcC--CCCCCCCCC
Confidence            47888999999999999999999999998 88988  889999887

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=4.7e-10  Score=70.20  Aligned_cols=43  Identities=30%  Similarity=0.444  Sum_probs=38.6

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhh-hccCCCCCceecCcC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITR-RHIGICEEPYQCSQC  230 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-~H~~~~~~~~~C~~C  230 (338)
                      ++.|.++++|.|.+|++.|.....|..|+ + .|.+  ++||.|.+|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~~H~~--~k~~~C~~C   47 (47)
T 2epx_A            4 GSSGTGKKPYECIECGKAFIQNTSLIRHW-RYYHTG--EKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCSBCCSSSCCCBSSHHHHHHHH-TTTTTT--SCSSSCCCC
T ss_pred             ccccCCCCCEECCccCchhCChHHHHHHh-HhhcCC--CCCCCCCCC
Confidence            47889999999999999999999999998 6 8988  889999887

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.4e-10  Score=72.37  Aligned_cols=44  Identities=20%  Similarity=0.300  Sum_probs=37.5

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceecccc
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAIC  199 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C  199 (338)
                      |++.|+++++|.|++|++.|.....|..|+                        .+|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~------------------------~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQ------------------------RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHH------------------------TTTCCCCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHH------------------------hhcCCCCCCCCCCC
Confidence            667788888899999999999988888887                        67888888888887

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.7e-10  Score=72.01  Aligned_cols=44  Identities=14%  Similarity=0.216  Sum_probs=35.6

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceecccc
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAIC  199 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C  199 (338)
                      |++.|.++++|.|++|++.|.....|..|+                        .+|+++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~------------------------~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHR------------------------RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHH------------------------TTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHH------------------------HHhCCCCCCCCCCC
Confidence            566778888888888888888888888887                        67778888888876

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.4e-10  Score=72.35  Aligned_cols=45  Identities=24%  Similarity=0.355  Sum_probs=36.9

Q ss_pred             HHHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceecccc
Q psy7466         131 KEMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAIC  199 (338)
Q Consensus       131 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C  199 (338)
                      .|++.|++.++|.|++|++.|.....|..|+                        .+|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~------------------------~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQ------------------------RIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHH------------------------GGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHH------------------------HHhcCCCCCCCCCC
Confidence            3667788888888888888888888888887                        67788888888877

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.4e-10  Score=72.37  Aligned_cols=44  Identities=18%  Similarity=0.313  Sum_probs=36.0

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceecccc
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAIC  199 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C  199 (338)
                      |++.|+++++|.|++|++.|.....|..|+                        .+|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~------------------------~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHR------------------------GIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHG------------------------GGTSCCCCCSCCCC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHh------------------------hhcCCCCCCCCCCC
Confidence            566788888888888888888888888886                        67788888888876

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.3e-10  Score=72.52  Aligned_cols=44  Identities=20%  Similarity=0.338  Sum_probs=37.1

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceecccc
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAIC  199 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C  199 (338)
                      |++.|.++++|.|++|++.|.....|..|+                        .+|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~------------------------~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQ------------------------KIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHG------------------------GGTSCSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHH------------------------HHhCCCCCCCCCCC
Confidence            667788888889988999998888888886                        67788888888877

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.5e-10  Score=72.16  Aligned_cols=44  Identities=18%  Similarity=0.302  Sum_probs=34.4

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceecccc
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAIC  199 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C  199 (338)
                      |++.|++.++|.|++|++.|.....|..|+                        ..|.+++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~------------------------~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQ------------------------RIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHH------------------------GGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHH------------------------HHcCCCCCCCCCCC
Confidence            566777788888888888888888888886                        66777788888776

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.4e-10  Score=72.37  Aligned_cols=44  Identities=20%  Similarity=0.186  Sum_probs=31.7

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceecccc
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAIC  199 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C  199 (338)
                      |++.|+++++|.|++|++.|.+...|..|+                        .+|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~------------------------~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHE------------------------RLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHH------------------------HHCCSSSCCCCCCC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHH------------------------HhcCCCCCCCCCCC
Confidence            556677777777777777777777777776                        55667777777766

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.7e-10  Score=71.96  Aligned_cols=45  Identities=13%  Similarity=0.113  Sum_probs=37.0

Q ss_pred             HHHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceecccc
Q psy7466         131 KEMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAIC  199 (338)
Q Consensus       131 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C  199 (338)
                      .|++.|++.++|.|++|++.|.....|..|+                        .+|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~------------------------~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQ------------------------RIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHH------------------------TTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHH------------------------HHcCCCCCCCCCCC
Confidence            3666788888888888888888888888887                        67788888888877

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.8e-10  Score=71.88  Aligned_cols=44  Identities=16%  Similarity=0.292  Sum_probs=36.2

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceecccc
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAIC  199 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C  199 (338)
                      |++.|+++++|.|++|++.|.....|..|+                        .+|.+++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~------------------------~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQ------------------------RIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSSHHHHHHHH------------------------TTTTTCSCCCSCCC
T ss_pred             CCcCCCCCcCcCCCCCCCccCCHHHHHHHH------------------------HhcCCCCCCCCCCC
Confidence            666788888888888888888888888887                        67778888888877

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.6e-10  Score=72.12  Aligned_cols=44  Identities=18%  Similarity=0.342  Sum_probs=36.4

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceecccc
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAIC  199 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C  199 (338)
                      |++.|++.++|.|++|++.|.....|..|+                        ..|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~------------------------~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQ------------------------LIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHH------------------------TTTCCCCCSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHH------------------------HHcCCCCCCCCCCC
Confidence            566788888888888888888888888887                        67788888888877

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.8e-10  Score=71.77  Aligned_cols=45  Identities=18%  Similarity=0.201  Sum_probs=37.8

Q ss_pred             HHHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceecccc
Q psy7466         131 KEMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAIC  199 (338)
Q Consensus       131 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C  199 (338)
                      .|++.|++.++|.|++|++.|.+...|..|+                        ..|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~------------------------~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQ------------------------RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHH------------------------GGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHH------------------------HhcCCCCCCCCCCC
Confidence            3667788888899999999999988888887                        67788888888877

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2e-10  Score=71.69  Aligned_cols=44  Identities=25%  Similarity=0.278  Sum_probs=36.2

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceecccc
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAIC  199 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C  199 (338)
                      |++.|+++++|.|++|++.|.....|..|+                        ..|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~------------------------~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHM------------------------RTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHH------------------------TTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHH------------------------HHhCCCCCCCCCCC
Confidence            566788888888888888888888888887                        67788888888877

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=1.5e-10  Score=72.28  Aligned_cols=44  Identities=20%  Similarity=0.200  Sum_probs=37.0

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceecccc
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAIC  199 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C  199 (338)
                      |++.|++.++|.|++|++.|.+...|..|+                        .+|.+++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~------------------------~~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQ------------------------RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHH------------------------TTTSCSCCSSCCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHH------------------------HHhCCCCCCCCCCC
Confidence            667788888888888888888888888887                        67888888888877

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=7e-10  Score=69.13  Aligned_cols=44  Identities=34%  Similarity=0.482  Sum_probs=38.9

Q ss_pred             cccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         184 MKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       184 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      |+.+|+++++|.|.+|++.|.....|..|+ +.|.+  ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHL-RIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHH-HHHCC--CCSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHH-HHhCC--CCCCCCCCC
Confidence            347889999999999999999999999998 88988  899999875

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.7e-10  Score=71.93  Aligned_cols=45  Identities=20%  Similarity=0.316  Sum_probs=36.7

Q ss_pred             HHHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceecccc
Q psy7466         131 KEMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAIC  199 (338)
Q Consensus       131 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C  199 (338)
                      .|++.|+++++|.|++|++.|.....|..|+                        ..|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~------------------------~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQ------------------------QIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHH------------------------HTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHH------------------------HHhCCCCCCCCCCC
Confidence            3667788888888888888888888888887                        67788888888876

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.93  E-value=1.4e-10  Score=72.29  Aligned_cols=44  Identities=14%  Similarity=0.156  Sum_probs=36.4

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceecccc
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAIC  199 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C  199 (338)
                      |++.|+++++|.|+.|++.|.....|..|+                        ..|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~------------------------~~H~~~~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQ------------------------NVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHG------------------------GGGSSSSCSCSSCC
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHH------------------------HHcCCCCCcCCCCC
Confidence            666788888888888888888888888886                        67788888888877

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.93  E-value=1.4e-10  Score=72.30  Aligned_cols=45  Identities=20%  Similarity=0.200  Sum_probs=37.9

Q ss_pred             HHHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceecccc
Q psy7466         131 KEMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAIC  199 (338)
Q Consensus       131 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C  199 (338)
                      .|++.|++.++|.|++|++.|.....|..|+                        .+|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~------------------------~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQ------------------------RSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHG------------------------GGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHH------------------------HHhCCCCCCCCCCC
Confidence            3667788888899999999999998888886                        67888888888877

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.92  E-value=1.7e-10  Score=72.01  Aligned_cols=44  Identities=20%  Similarity=0.317  Sum_probs=36.2

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceecccc
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAIC  199 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C  199 (338)
                      |++.|+++++|.|++|++.|.....|..|+                        ..|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~------------------------~~H~~~k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQ------------------------KIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHH------------------------TGGGCCCCCSSSCC
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHH------------------------HhcCCCCCCCCCCC
Confidence            666788888888888888888888888887                        66778888888876

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1.8e-10  Score=71.86  Aligned_cols=45  Identities=18%  Similarity=0.214  Sum_probs=35.8

Q ss_pred             HHHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceecccc
Q psy7466         131 KEMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAIC  199 (338)
Q Consensus       131 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C  199 (338)
                      .|+++|+++++|.|++|++.|.....|..|+                        ..|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~------------------------~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQ------------------------KIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHH------------------------HHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHH------------------------HHcCCCCCCCCCCC
Confidence            3667788888888888888888888888887                        56777888888776

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.92  E-value=1.5e-10  Score=72.30  Aligned_cols=44  Identities=14%  Similarity=0.212  Sum_probs=31.9

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceecccc
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAIC  199 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C  199 (338)
                      |+++|+++++|.|++|++.|.+...|..|+                        .+|.+++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~------------------------~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHH------------------------KLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHH------------------------HHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHH------------------------HHcCCCCCCCCCCC
Confidence            556677777777777777777777777776                        45667777777766

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=1.2e-10  Score=71.86  Aligned_cols=30  Identities=27%  Similarity=0.390  Sum_probs=20.2

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHH
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHF  161 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~  161 (338)
                      |++.|++++||.|++|++.|.....|..|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~   30 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQ   30 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHH
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHH
Confidence            345566666777777777777777777775

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=1.7e-10  Score=72.00  Aligned_cols=44  Identities=11%  Similarity=0.292  Sum_probs=33.0

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceecccc
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAIC  199 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C  199 (338)
                      |++.|+++++|.|++|++.|.....|..|+                        .+|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~------------------------~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHS------------------------MVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSSHHHHHHHH------------------------HHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCcCCCcCCchhCCHHHHHHHH------------------------HHcCCCCCCCCCCC
Confidence            556677777788888888888877777776                        56677777777776

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=8.9e-10  Score=68.61  Aligned_cols=43  Identities=33%  Similarity=0.565  Sum_probs=39.3

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      +.+|+++++|.|.+|++.|.....|..|+ +.|.+  ++||.|.+|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~--~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQ-RIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHH-TTTSS--SCCCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHH-HHhCC--CCCCCCCCC
Confidence            47888999999999999999999999998 88988  899999987

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=1.9e-10  Score=71.77  Aligned_cols=44  Identities=18%  Similarity=0.216  Sum_probs=35.0

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceecccc
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAIC  199 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C  199 (338)
                      |+++|+++++|.|++|++.|.....|..|+                        .+|++++||.|++|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~------------------------~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQ------------------------KVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHH------------------------TTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHH------------------------HhhCCCCCCCCCCC
Confidence            566777888888888888888888888886                        67777888888776

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=2e-10  Score=71.60  Aligned_cols=45  Identities=16%  Similarity=0.240  Sum_probs=37.0

Q ss_pred             HHHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceecccc
Q psy7466         131 KEMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAIC  199 (338)
Q Consensus       131 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C  199 (338)
                      .|++.|+++++|.|++|++.|.....|..|+                        ..|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~------------------------~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQ------------------------RVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHG------------------------GGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHH------------------------HHcCCCCCCCCCCC
Confidence            3677788888888888888888888888886                        67788888888877

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=2e-10  Score=71.64  Aligned_cols=45  Identities=16%  Similarity=0.076  Sum_probs=37.1

Q ss_pred             HHHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceecccc
Q psy7466         131 KEMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAIC  199 (338)
Q Consensus       131 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C  199 (338)
                      .|++.|+++++|.|++|++.|.....|..|+                        .+|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~------------------------~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQ------------------------RVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHH------------------------TTTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHH------------------------HHhCCCCCCCCCCC
Confidence            3666788888888888888888888888887                        67788888888877

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=1.7e-10  Score=71.95  Aligned_cols=44  Identities=18%  Similarity=0.337  Sum_probs=35.5

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceecccc
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAIC  199 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C  199 (338)
                      |++.|++.++|.|++|++.|.....|..|+                        .+|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~------------------------~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHH------------------------MVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHG------------------------GGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHH------------------------HHhCCCCCCCCCCC
Confidence            566778888888888888888888888886                        66778888888876

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.91  E-value=1.5e-10  Score=72.18  Aligned_cols=44  Identities=16%  Similarity=0.265  Sum_probs=30.9

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceecccc
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAIC  199 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C  199 (338)
                      |++.|+++++|.|++|++.|.....|..|+                        .+|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~------------------------~~H~~~k~~~C~~C   46 (46)
T 2emk_A            3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQ------------------------RVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCSCBCSSSCCBCSCHHHHHHHH------------------------HHHSSCCCSSCCCC
T ss_pred             CCCccCCCCceECCCCCchhCCHHHHHHHH------------------------HHcCCCCCCCCCCC
Confidence            555667777777777777777777777776                        45666677777765

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=1.9e-10  Score=71.81  Aligned_cols=44  Identities=18%  Similarity=0.205  Sum_probs=34.5

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceecccc
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAIC  199 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C  199 (338)
                      |++.|+++++|.|+.|++.|.....|..|+                        .+|.+++||.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~------------------------~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQ------------------------RVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHG------------------------GGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHH------------------------HhcCCCCCCCCCCC
Confidence            556677888888888888888888888886                        66777788888776

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=1.7e-10  Score=71.95  Aligned_cols=44  Identities=20%  Similarity=0.217  Sum_probs=32.0

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceecccc
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAIC  199 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C  199 (338)
                      |++.|+++++|.|++|++.|.....|..|+                        .+|.++++|.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~------------------------~~H~~~~~~~C~~C   46 (46)
T 2eov_A            3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQ------------------------KCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSCBCSSSCCBCSSHHHHHHHH------------------------HHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCccCCccChhhCCHHHHHHHH------------------------HhcCCCCCCCCCCC
Confidence            556677777777777777777777777776                        45666777777766

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=1.4e-10  Score=72.37  Aligned_cols=44  Identities=16%  Similarity=0.220  Sum_probs=31.2

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceecccc
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAIC  199 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C  199 (338)
                      |++.|+++++|.|++|++.|.+...|..|+                        .+|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~------------------------~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQ------------------------RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHH------------------------HHHSCCCTTSSSCC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHH------------------------HHhCCCCCCCCCCC
Confidence            556677777777777777777777777776                        45666677777766

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.91  E-value=9.8e-11  Score=78.29  Aligned_cols=49  Identities=10%  Similarity=0.154  Sum_probs=31.6

Q ss_pred             CCCceecccccccccChhhHHHHhhccCCCCCCccccCCCCCCCCCCCCccccc
Q psy7466         247 KHEVFQCTQCEKYYRSQSTLDVHVSKKHPAGTGKVKRDIKPNTNILTVTPNRRS  300 (338)
Q Consensus       247 ~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~C~~C~~~f~~~~~l~~H~  300 (338)
                      ++++|.|+.||+.|.....|.    ..| .++++|.|+.|++.|....++..+.
T Consensus        11 ~~k~~~C~~C~k~F~~~~~l~----~~H-~~~k~~~C~~C~k~f~~~~~~~~~~   59 (62)
T 1vd4_A           11 NRASFKCPVCSSTFTDLEANQ----LFD-PMTGTFRCTFCHTEVEEDESAMPKK   59 (62)
T ss_dssp             SSSEEECSSSCCEEEHHHHHH----HEE-TTTTEEBCSSSCCBCEECTTCSCCC
T ss_pred             CCCCccCCCCCchhccHHHhH----hhc-CCCCCEECCCCCCccccCccccccc
Confidence            445666666666666655554    456 6777777777777777766666554

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.90  E-value=1.1e-09  Score=68.95  Aligned_cols=44  Identities=30%  Similarity=0.461  Sum_probs=39.4

Q ss_pred             cccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcCcc
Q psy7466         186 FTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSL  232 (338)
Q Consensus       186 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~~  232 (338)
                      ..+.++++|.|.+|++.|.....|..|+ +.|.+  ++||.|.+|++
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~k~~~C~~C~k   48 (48)
T 2epr_A            5 SSGRTRKQVACEICGKIFRDVYHLNRHK-LSHSG--EKPYSSGPSSG   48 (48)
T ss_dssp             SCCCCCCSEEETTTTEEESSHHHHHHHG-GGSCS--CCCCCSCCCCC
T ss_pred             CCCCCCcCeeCCCCCcccCCHHHHHHHH-HhcCC--CCCccCCCCCC
Confidence            4577888999999999999999999998 88988  89999999985

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.90  E-value=2e-10  Score=71.66  Aligned_cols=44  Identities=20%  Similarity=0.188  Sum_probs=36.5

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceecccc
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAIC  199 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C  199 (338)
                      |++.|+++++|.|++|++.|.+...|..|+                        ..|.++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~------------------------~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQ------------------------RVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHG------------------------GGGTSCCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHH------------------------HHhCCCCCCCCCCC
Confidence            667788888888888888888888888886                        67788888888877

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=2.5e-10  Score=71.47  Aligned_cols=44  Identities=18%  Similarity=0.336  Sum_probs=36.6

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhccc-ccCCCcceecccc
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKF-TQSGRSSFKCAIC  199 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~-~h~~~~~~~C~~C  199 (338)
                      |++.|.++++|.|++|++.|.....|..|+                        . .|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~------------------------~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHW------------------------RYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHH------------------------TTTTTTSCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHh------------------------HhhcCCCCCCCCCCC
Confidence            566788888888888888888888888887                        5 7788888888877

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=1.5e-10  Score=72.20  Aligned_cols=44  Identities=20%  Similarity=0.254  Sum_probs=31.5

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceecccc
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAIC  199 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C  199 (338)
                      |++.|++.+||.|++|++.|.....|..|+                        .+|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~------------------------~~H~~~k~~~C~~C   46 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQ------------------------RTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHH------------------------HHHTTSCCSCSSCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHH------------------------HHcCCCCCCCCCCC
Confidence            556677777777777777777777777776                        45666777777766

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=1.9e-10  Score=71.72  Aligned_cols=44  Identities=16%  Similarity=0.110  Sum_probs=33.7

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceecccc
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAIC  199 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C  199 (338)
                      |++.|+++++|.|++|++.|.....|..|+                        ..|+++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~------------------------~~H~~~k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQ------------------------RTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHH------------------------HHCCSCCCSCCCCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHH------------------------HHhCCCCCCCCCCC
Confidence            566677777888888888888888888886                        56777777888776

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=1.6e-10  Score=72.08  Aligned_cols=44  Identities=20%  Similarity=0.375  Sum_probs=31.2

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceecccc
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAIC  199 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C  199 (338)
                      |++.|++.++|.|+.|++.|.....|..|+                        ..|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~------------------------~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHW------------------------RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHH------------------------HHHSSSSCSSCCCC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHH------------------------HHHCCCCCCCCCCC
Confidence            555677777777777777777777777776                        45666677777766

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.89  E-value=1e-09  Score=68.00  Aligned_cols=43  Identities=21%  Similarity=0.393  Sum_probs=38.5

Q ss_pred             cccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcCc
Q psy7466         186 FTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCS  231 (338)
Q Consensus       186 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~  231 (338)
                      ..|+++++|.|.+|++.|.....|..|+ +.|.+  +++|.|+.||
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~-~~H~~--~~~~~C~~cg   45 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHV-RSHDG--SVGKSGPSSG   45 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHH-HHHSC--CCCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHH-HHccC--CCCCCCcCCC
Confidence            4688889999999999999999999998 88988  8999999986

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=2.8e-10  Score=70.94  Aligned_cols=45  Identities=18%  Similarity=0.297  Sum_probs=38.1

Q ss_pred             HHHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceecccc
Q psy7466         131 KEMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAIC  199 (338)
Q Consensus       131 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C  199 (338)
                      .|++.|+++++|.|++|++.|.....|..|+                        ..|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~------------------------~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQ------------------------KIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHH------------------------TTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHH------------------------HHcCCCCCCCCCCC
Confidence            3667788888999999999999999999997                        67888888998875

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=1.9e-10  Score=71.79  Aligned_cols=44  Identities=20%  Similarity=0.265  Sum_probs=31.3

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceecccc
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAIC  199 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C  199 (338)
                      |++.|++.++|.|++|++.|.+...|..|+                        .+|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~------------------------~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHR------------------------RIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHH------------------------HHHTCCCSSCSSCC
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHH------------------------HHcCCCCCCCCCCC
Confidence            555677777777777777777777777776                        45666777777766

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=2.3e-10  Score=71.32  Aligned_cols=44  Identities=16%  Similarity=0.183  Sum_probs=31.7

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceecccc
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAIC  199 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C  199 (338)
                      |++.|.+++||.|++|++.|.....|..|+                        ..|++++||.|++|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~------------------------~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQ------------------------RSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHH------------------------HHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHH------------------------HHhCCCCCCCCCCC
Confidence            455677777777777777777777777776                        55667777777766

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.88  E-value=3.1e-10  Score=70.77  Aligned_cols=44  Identities=18%  Similarity=0.136  Sum_probs=33.1

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceecccc
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAIC  199 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C  199 (338)
                      |++.|.++++|.|++|++.|.+...|..|+                        .+|+++++|.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~------------------------~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQ------------------------RMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHH------------------------GGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHH------------------------HHcCCCCCCCCCCC
Confidence            455677777788888888888888888876                        56777777877776

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.88  E-value=1.4e-09  Score=68.47  Aligned_cols=40  Identities=20%  Similarity=0.393  Sum_probs=34.3

Q ss_pred             CCCceecccccccccChhhHHHHhhccCCCCCCccccCCCCC
Q psy7466         247 KHEVFQCTQCEKYYRSQSTLDVHVSKKHPAGTGKVKRDIKPN  288 (338)
Q Consensus       247 ~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~C~~C~~  288 (338)
                      ..++|.|.+|++.|.+...|..| ++.| .++++|.|++|++
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H-~~~H-~~~k~~~C~~C~k   48 (48)
T 2epr_A            9 TRKQVACEICGKIFRDVYHLNRH-KLSH-SGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCSEEETTTTEEESSHHHHHHH-GGGS-CSCCCCCSCCCCC
T ss_pred             CCcCeeCCCCCcccCCHHHHHHH-HHhc-CCCCCccCCCCCC
Confidence            46788898999999999999999 7788 8888999999885

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=1.6e-10  Score=72.12  Aligned_cols=44  Identities=11%  Similarity=0.246  Sum_probs=36.0

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceecccc
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAIC  199 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~C  199 (338)
                      |++.|++.++|.|++|++.|.....|..|+                        .+|.+++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~------------------------~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQ------------------------RVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTG------------------------GGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHH------------------------HHcCCCCCCCCCCC
Confidence            566788888888888888888888888886                        67778888888877

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=2.5e-10  Score=71.19  Aligned_cols=30  Identities=23%  Similarity=0.372  Sum_probs=20.5

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHH
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHF  161 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~  161 (338)
                      |++.|.++++|.|++|++.|.....|..|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~   32 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQ   32 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHH
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHH
Confidence            455566666777777777777777777775

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=2.1e-10  Score=71.52  Aligned_cols=30  Identities=30%  Similarity=0.416  Sum_probs=18.4

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHH
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHF  161 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~  161 (338)
                      |+++|+++++|.|++|++.|.....|..|+
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~   32 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQ   32 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHH
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHH
Confidence            444556666666666666666666666665

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=2.1e-10  Score=71.56  Aligned_cols=29  Identities=17%  Similarity=0.369  Sum_probs=16.0

Q ss_pred             HHHhcCCCccccccccccccChhhHHHHH
Q psy7466         133 MERISQGLEYQCSVCSQVFIEKKNLSKHF  161 (338)
Q Consensus       133 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~  161 (338)
                      ++.|.++++|.|++|++.|.+...|..|+
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~   32 (46)
T 2ytm_A            4 GSSGTGEKPYKCMECGKAFGDNSSCTQHQ   32 (46)
T ss_dssp             CCCCSSCCSSSBTTTTBCCSSHHHHHHHH
T ss_pred             CcCCCCCCCcCCCCCCchhCCHHHHHHHH
Confidence            34455555555555555555555555554

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.86  E-value=2e-09  Score=65.54  Aligned_cols=41  Identities=27%  Similarity=0.472  Sum_probs=36.5

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCS  228 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~  228 (338)
                      +++|+++++|.|.+|++.|.....|..|+ +.|.+  +++|.|+
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~~~~~C~   42 (42)
T 2el5_A            2 SSGSSGENPYECSECGKAFNRKDQLISHQ-RTHAG--ESGPSSG   42 (42)
T ss_dssp             CSSSSSCCSEECSSSCCEESSHHHHHHHH-GGGCC--CCSCCCC
T ss_pred             CCCCCCCCCccCCCcChhhCCHHHHHHHH-HhcCC--CCCCCCC
Confidence            47888999999999999999999999998 88988  8899884

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=9.1e-10  Score=68.58  Aligned_cols=43  Identities=26%  Similarity=0.334  Sum_probs=38.5

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      +++|.++++|.|.+|++.|.....|..|+ +.|.+  ++||.|++|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHW-ITHTR--EKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHH-THHHH--CCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHH-HHcCC--CCCCCCCCC
Confidence            36788999999999999999999999998 88888  899999887

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=1.8e-09  Score=67.20  Aligned_cols=43  Identities=30%  Similarity=0.469  Sum_probs=38.1

Q ss_pred             cccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCc
Q psy7466         184 MKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQ  229 (338)
Q Consensus       184 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~  229 (338)
                      |+.+|+++++|.|.+|++.|.....|..|+ +.|.+  ++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~k~~~C~~   45 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHR-RSHTG--EKPSGPSS   45 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHH-HHHSS--SSCCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHH-HhcCC--CCCCCCCC
Confidence            347899999999999999999999999998 88988  89999864

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=2.1e-09  Score=66.84  Aligned_cols=42  Identities=29%  Similarity=0.442  Sum_probs=37.5

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCc
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQ  229 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~  229 (338)
                      +.+|+++++|.|.+|++.|.....|..|+ +.|.+  ++||.|++
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~--~k~~~C~~   45 (46)
T 2enf_A            4 GSSGTGEKPYKCNECGKVFTQNSHLVRHR-GIHTG--EKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCBCSSSCCBCSSHHHHHHHH-TTTTT--SSCCCCSC
T ss_pred             CcCCCCCcCeECCCCCcccCCHHHHHHHH-HhhCC--CCCCCCCC
Confidence            47889999999999999999999999998 88988  89999864

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=2.2e-09  Score=66.76  Aligned_cols=42  Identities=29%  Similarity=0.474  Sum_probs=37.7

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCc
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQ  229 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~  229 (338)
                      +.+|+++++|.|.+|++.|.....|..|+ +.|.+  ++||.|+.
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~--~k~~~C~~   45 (46)
T 2ytp_A            4 GSSGTGERHYECSECGKAFARKSTLIMHQ-RIHTG--EKPSGPSS   45 (46)
T ss_dssp             CCSSCCCCCEECSSSCCEESSHHHHHHHH-TTTSC--CCCCSSCC
T ss_pred             ccCcCCCCCeECCcCCcccCCHHHHHHHH-HHhCC--CCCCCCCC
Confidence            47889999999999999999999999998 88988  89999864

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.84  E-value=2e-09  Score=67.01  Aligned_cols=43  Identities=37%  Similarity=0.568  Sum_probs=37.7

Q ss_pred             cccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCc
Q psy7466         184 MKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQ  229 (338)
Q Consensus       184 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~  229 (338)
                      |+.+|.++++|.|.+|++.|.....|..|+ +.|.+  ++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~--~k~~~C~~   45 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQ-RIHTG--EKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHH-HHHTT--SCSSSSCC
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHH-HHhCC--CCCCCCCC
Confidence            347889999999999999999999999998 88988  88999864

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=2.5e-09  Score=66.48  Aligned_cols=43  Identities=28%  Similarity=0.443  Sum_probs=38.1

Q ss_pred             cccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCc
Q psy7466         184 MKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQ  229 (338)
Q Consensus       184 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~  229 (338)
                      |+++|+++++|.|.+|++.|.....|..|+ +.|.+  +++|.|+.
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~-~~H~~--~k~~~C~~   45 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQ-RIHRG--EKPSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHH-GGGCS--CCCCSCCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHH-hHhCC--CCCCCCCC
Confidence            348899999999999999999999999998 88988  89999864

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=2.5e-09  Score=66.47  Aligned_cols=42  Identities=29%  Similarity=0.442  Sum_probs=37.7

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCc
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQ  229 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~  229 (338)
                      +.+|+++++|.|.+|++.|.....|..|+ +.|.+  ++||.|++
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~~p~~C~~   45 (46)
T 2yts_A            4 GSSGTGEKPYICNECGKSFIQKSHLNRHR-RIHTG--EKPSGPSS   45 (46)
T ss_dssp             SCCCCSCCSEECSSSCCEESSHHHHHHHG-GGTSS--CCSSCCCC
T ss_pred             CCCCCCCcCEECCCCChhhCChHHHHHHH-HhcCC--CCCcCCCC
Confidence            47889999999999999999999999998 88988  89999864

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=2.2e-09  Score=66.71  Aligned_cols=42  Identities=31%  Similarity=0.475  Sum_probs=37.4

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCc
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQ  229 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~  229 (338)
                      +++|+++++|.|.+|++.|.....|..|+ +.|.+  ++||.|++
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~k~~~C~~   45 (46)
T 2eow_A            4 GSSGTGEKPYKCNECGKAFRARSSLAIHQ-ATHSG--EKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCEECTTSCCEESSHHHHHHHH-HHHCC--CSCSCTTC
T ss_pred             cCCCCCCCCeeccccCChhcCHHHHHHHH-HHcCC--CCCCCCCC
Confidence            47889999999999999999999999998 88988  89999864

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=2.2e-09  Score=66.75  Aligned_cols=43  Identities=28%  Similarity=0.440  Sum_probs=37.9

Q ss_pred             cccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCc
Q psy7466         184 MKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQ  229 (338)
Q Consensus       184 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~  229 (338)
                      |+.+|.++++|.|.+|++.|.....|..|+ +.|.+  ++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~~~~~C~~   45 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQ-KIHTG--ERPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHH-TTTSC--CCCSCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHH-HHhCC--CCCCCCCC
Confidence            347889999999999999999999999998 88988  89999864

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=2.5e-09  Score=66.46  Aligned_cols=42  Identities=31%  Similarity=0.540  Sum_probs=37.5

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCc
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQ  229 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~  229 (338)
                      +..|+++++|.|.+|++.|.....|..|+ +.|.+  ++||.|++
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~k~~~C~~   45 (46)
T 2ytf_A            4 GSSGTGEKPFECSECQKAFNTKSNLIVHQ-RTHTG--EKPSGPSS   45 (46)
T ss_dssp             CCSSCCCCSEECSSSCCEESSHHHHHHHH-HTSCS--SSSSCCCC
T ss_pred             CCCCCCCCCcCCCCCCcccCCHHHHHHHH-HHhCC--CCCCCCCC
Confidence            47889999999999999999999999998 88988  89999864

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.83  E-value=5.6e-10  Score=74.53  Aligned_cols=49  Identities=22%  Similarity=0.440  Sum_probs=35.8

Q ss_pred             cccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcCcccccChhHH
Q psy7466         186 FTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLL  240 (338)
Q Consensus       186 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~~~f~~~~~l  240 (338)
                      ..|++++||.|+.||+.|.....|.    ..|.+  ++||.|++|++.|.....+
T Consensus         7 ~~H~~~k~~~C~~C~k~F~~~~~l~----~~H~~--~k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            7 RDSTNRASFKCPVCSSTFTDLEANQ----LFDPM--TGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             SSCCSSSEEECSSSCCEEEHHHHHH----HEETT--TTEEBCSSSCCBCEECTTC
T ss_pred             HHcCCCCCccCCCCCchhccHHHhH----hhcCC--CCCEECCCCCCccccCccc
Confidence            6777788888888888887766664    46776  7778888888877765543

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=2.3e-09  Score=66.64  Aligned_cols=42  Identities=26%  Similarity=0.555  Sum_probs=37.2

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCc
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQ  229 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~  229 (338)
                      ++.|+++++|.|.+|++.|.....|..|+ +.|.+  ++||.|++
T Consensus         4 ~~~H~~~~~~~C~~C~k~F~~~~~L~~H~-~~H~~--~~~~~C~~   45 (46)
T 2em3_A            4 GSSGTGEKPYECKVCSKAFTQKAHLAQHQ-KTHTG--EKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCSEECSSSCCEESSHHHHHHHH-HHHCC--CCCCCSCC
T ss_pred             CCCCCCCcCeECCCCCcccCCHHHHHHHH-HHhCC--CCCCCCCC
Confidence            47888999999999999999999999998 88988  89999864

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=2.4e-09  Score=66.58  Aligned_cols=42  Identities=31%  Similarity=0.498  Sum_probs=37.4

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCc
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQ  229 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~  229 (338)
                      +.+|+++++|.|.+|++.|.....|..|+ +.|.+  ++||.|++
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~k~~~C~~   45 (46)
T 2eq2_A            4 GSSGTGGKPYQCNECGKAFSQTSKLARHQ-RVHTG--EKPSGPSS   45 (46)
T ss_dssp             CCSSSSSCSSSCCSSCCCCSSHHHHHHHG-GGGCC--CCCCCCCC
T ss_pred             ccccCCCCCeECCCCCcccCCHHHHHHHH-HHcCC--CCCCCCCC
Confidence            47889999999999999999999999998 88988  89999864

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=2.6e-09  Score=66.38  Aligned_cols=42  Identities=29%  Similarity=0.469  Sum_probs=37.4

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCc
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQ  229 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~  229 (338)
                      +.+|+++++|.|.+|++.|.....|..|+ +.|.+  ++||.|++
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~k~~~C~~   45 (46)
T 2ep1_A            4 GSSGTGEKPYECSDCGKSFIKKSQLHVHQ-RIHTG--ENPSGPSS   45 (46)
T ss_dssp             CCCCSSCCSSCCSSSCCCCSSHHHHHHHH-GGGSS--SCCCSSSC
T ss_pred             ccCCCCCCCcCCCCCCchhCCHHHHHHHH-HHhCC--CCCCCCCC
Confidence            47889999999999999999999999998 88988  89999864

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=2.9e-09  Score=66.19  Aligned_cols=42  Identities=29%  Similarity=0.512  Sum_probs=37.6

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCc
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQ  229 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~  229 (338)
                      +.+|+++++|.|.+|++.|.....|..|+ +.|.+  ++||.|++
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~--~k~~~C~~   45 (46)
T 2yrj_A            4 GSSGTGEKPYRCGECGKAFAQKANLTQHQ-RIHTG--EKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCEECSSSCCEESSHHHHHHHH-TTTSS--CCSSCSCC
T ss_pred             ccCCCCCCCeECCCCCCccCCHHHHHHHH-HHcCC--CCCCCCCC
Confidence            47889999999999999999999999998 88988  89999864

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=2.7e-09  Score=66.35  Aligned_cols=42  Identities=36%  Similarity=0.565  Sum_probs=37.5

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCc
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQ  229 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~  229 (338)
                      +.+|.++++|.|.+|++.|.....|..|+ +.|.+  ++||.|++
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~k~~~C~~   45 (46)
T 2em6_A            4 GSSGMGEKCYKCDVCGKEFSQSSHLQTHQ-RVHTG--EKPSGPSS   45 (46)
T ss_dssp             CSCCCCCCCCBCSSSCCBCSSHHHHHHHH-TTTSS--SCCCCTTC
T ss_pred             ccccCCCCCeECCCCCcccCCHHHHHHHH-HHcCC--CCCCCCCC
Confidence            47889999999999999999999999998 88988  89999864

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=2.4e-09  Score=66.67  Aligned_cols=43  Identities=28%  Similarity=0.475  Sum_probs=38.0

Q ss_pred             cccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCc
Q psy7466         184 MKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQ  229 (338)
Q Consensus       184 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~  229 (338)
                      ++++|+++++|.|.+|++.|.....|..|+ +.|.+  ++||.|++
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHH-SVHSG--ERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHT-TTTTS--CCSCTTSC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHH-HhcCC--CCCCCCCC
Confidence            347889999999999999999999999998 88988  89999874

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=2.4e-09  Score=66.62  Aligned_cols=42  Identities=29%  Similarity=0.457  Sum_probs=37.3

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCc
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQ  229 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~  229 (338)
                      +.+|+++++|.|.+|++.|.....|..|+ +.|.+  ++||.|++
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~--~k~~~C~~   45 (46)
T 2yti_A            4 GSSGTGEKPYKCNECGKVFTQNSHLARHR-GIHTG--EKPSGPSS   45 (46)
T ss_dssp             CCCCSCCCTTCCSSSCCCCSSHHHHHHHH-TTTSC--SCCSSTTC
T ss_pred             CcCCCCCcCeECCCCCcccCChhHHHHHh-HhcCC--CCCCCCCC
Confidence            47889999999999999999999999998 88988  89999864

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=3e-09  Score=64.64  Aligned_cols=41  Identities=27%  Similarity=0.343  Sum_probs=35.7

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCS  228 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~  228 (338)
                      +++|.++++|.|.+|++.|.....|..|+ ..|.+  +++|.|.
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~~~~~C~   42 (42)
T 2yte_A            2 SSGSSGEKPYSCAECKETFSDNNRLVQHQ-KMHTV--KSGPSSG   42 (42)
T ss_dssp             CSSSCSCCSCBCTTTCCBCSSHHHHHHHH-HHTSC--CSSCCCC
T ss_pred             CcCcCCCCCeECCCCCCccCCHHHHHHHH-HHhCC--CCCCCCC
Confidence            47788899999999999999999999998 78888  8898874

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=5e-10  Score=69.82  Aligned_cols=30  Identities=20%  Similarity=0.437  Sum_probs=21.2

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHH
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHF  161 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~  161 (338)
                      |++.|+++++|.|++|++.|.....|..|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~   32 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHL   32 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHH
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHH
Confidence            455666777777777777777777777776

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=3.2e-09  Score=66.04  Aligned_cols=42  Identities=33%  Similarity=0.530  Sum_probs=37.2

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCc
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQ  229 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~  229 (338)
                      +.+|+++++|.|.+|++.|.....|..|+ +.|.+  ++||.|+.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~k~~~C~~   45 (46)
T 2yth_A            4 GSSGSGEKPFQCEECGKRFTQNSHLHSHQ-RVHTG--EKPSGPSS   45 (46)
T ss_dssp             CSCCCCSSSBCCSSSCCCBSSHHHHHHHG-GGGTT--CCCSSCCC
T ss_pred             ccCCCCCcCCCCCCCCcccCCHHHHHHHH-HhcCC--CCCCCCCC
Confidence            47888999999999999999999999998 88988  89999863

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=2.4e-09  Score=66.53  Aligned_cols=42  Identities=29%  Similarity=0.462  Sum_probs=37.1

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCc
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQ  229 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~  229 (338)
                      +.+|.++++|.|.+|++.|.....|..|+ +.|.+  ++||.|++
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~--~kp~~C~~   45 (46)
T 2eor_A            4 GSSGTGEKPYNCEECGKAFIHDSQLQEHQ-RIHTG--EKPSGPSS   45 (46)
T ss_dssp             SSSSSCCCSEECTTTCCEESSHHHHHHHH-HHHHS--CCCSSSTT
T ss_pred             CcCcCCCcCccCCCCCCCcCCHHHHHHHH-HhcCC--CCCCCCCC
Confidence            47888999999999999999999999998 88888  88999864

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=2.8e-09  Score=66.31  Aligned_cols=42  Identities=36%  Similarity=0.552  Sum_probs=37.2

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCc
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQ  229 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~  229 (338)
                      +.+|.++++|.|.+|++.|.....|..|+ +.|.+  ++||.|++
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~--~k~~~C~~   45 (46)
T 2en9_A            4 GSSGAGKKLFKCNECKKTFTQSSSLTVHQ-RIHTG--EKPSGPSS   45 (46)
T ss_dssp             CSSCCSSCCCBCTTTCCBCSSHHHHHHHH-HHHTS--SCCCSCCC
T ss_pred             CCCCCCCCCEECCccCcccCCHHHHHHHH-HHcCC--CCCCCCCC
Confidence            47888999999999999999999999998 88988  88999864

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=2.8e-09  Score=66.25  Aligned_cols=42  Identities=31%  Similarity=0.472  Sum_probs=37.3

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCc
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQ  229 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~  229 (338)
                      +++|+++++|.|.+|++.|.....|..|+ +.|.+  ++||.|+.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~k~~~C~~   45 (46)
T 2eq1_A            4 GSSGTGEKPYKCNECGKAFRAHSNLTTHQ-VIHTG--EKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCCCTTTTCCCSSHHHHHHHH-TTTCC--SCCSSCCC
T ss_pred             ccccCCCCCeECCcCChhhCCHHHHHHHH-HHhCC--CCCCCCCC
Confidence            47889999999999999999999999998 88988  88999864

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=2.3e-09  Score=66.66  Aligned_cols=40  Identities=23%  Similarity=0.370  Sum_probs=19.6

Q ss_pred             hhccCCCCCceecCcCcccccChhHHHHHHHc--CCCceecccc
Q psy7466         215 RRHIGICEEPYQCSQCSLCFDQGSLLKAHVLE--KHEVFQCTQC  256 (338)
Q Consensus       215 ~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~--~~~~~~C~~C  256 (338)
                      +.|.+  +++|.|.+|++.|.....|..|+++  ++++|.|++|
T Consensus         5 ~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            5 SSGTG--VKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSC--CCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cccCC--CcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44444  4555555555555555555555443  3444444444

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=3.5e-09  Score=65.09  Aligned_cols=41  Identities=24%  Similarity=0.459  Sum_probs=36.5

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCS  228 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~  228 (338)
                      +.+|.++++|.|.+|++.|.....|..|+ ..|.+  ++||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~~~~~C~   44 (44)
T 2eof_A            4 GSSGTGEKPYECNECQKAFNTKSNLMVHQ-RTHTG--ESGPSSG   44 (44)
T ss_dssp             SSCCSCCCSEECTTTCCEESCHHHHHHHH-HHTTT--SSCSCCC
T ss_pred             ccCCCCCCCeECCCCCcccCCHhHHHHHH-HHhCC--CCCCCCC
Confidence            47889999999999999999999999998 88988  8899884

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=2.2e-09  Score=66.80  Aligned_cols=40  Identities=25%  Similarity=0.460  Sum_probs=20.1

Q ss_pred             hhccCCCCCceecCcCcccccChhHHHHHHHc--CCCceecccc
Q psy7466         215 RRHIGICEEPYQCSQCSLCFDQGSLLKAHVLE--KHEVFQCTQC  256 (338)
Q Consensus       215 ~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~--~~~~~~C~~C  256 (338)
                      +.|.+  +++|.|++|++.|.....|..|+++  ++++|.|++|
T Consensus         5 ~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            5 SSGSG--ERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCSC--CCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCC--CCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            44544  4555555555555555555555443  4444555444

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=3.1e-09  Score=65.33  Aligned_cols=41  Identities=22%  Similarity=0.449  Sum_probs=36.7

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCS  228 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~  228 (338)
                      +++|+++++|.|++|++.|.....|..|+ ..|.+  +++|.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~~~~~C~   44 (44)
T 2eoj_A            4 GSSGTGENPYECCECGKVFSRKDQLVSHQ-KTHSG--QSGPSSG   44 (44)
T ss_dssp             CCSSSSCCSCEETTTTEECSSHHHHHHHH-TTSSS--SCSCCCC
T ss_pred             ccccCCCcCeeCCCCCCccCCHHHHHHHH-HHcCC--CCCCCCC
Confidence            47899999999999999999999999998 88988  8899884

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=2.3e-09  Score=66.71  Aligned_cols=40  Identities=25%  Similarity=0.354  Sum_probs=19.3

Q ss_pred             hhccCCCCCceecCcCcccccChhHHHHHHHc--CCCceecccc
Q psy7466         215 RRHIGICEEPYQCSQCSLCFDQGSLLKAHVLE--KHEVFQCTQC  256 (338)
Q Consensus       215 ~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~--~~~~~~C~~C  256 (338)
                      +.|.+  +++|.|.+|++.|.....|..|+++  ++++|.|++|
T Consensus         5 ~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            5 SSGTG--ERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSC--CCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCC--CCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            44444  4555555555555555555555443  3444444443

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=3.7e-09  Score=65.73  Aligned_cols=42  Identities=29%  Similarity=0.469  Sum_probs=37.1

Q ss_pred             cccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecC
Q psy7466         184 MKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCS  228 (338)
Q Consensus       184 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~  228 (338)
                      |+++|+++++|.|.+|++.|.....|..|+ +.|.+  +++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHK-RVHTG--ERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHH-HHCSS--CCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHH-HHhCC--CCCCCCC
Confidence            347888999999999999999999999998 88988  8999986

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=3.4e-09  Score=65.93  Aligned_cols=42  Identities=26%  Similarity=0.449  Sum_probs=37.3

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCc
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQ  229 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~  229 (338)
                      +.+|+++++|.|.+|++.|.....|..|+ +.|.+  +++|.|+.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~~~~~C~~   45 (46)
T 2eoz_A            4 GSSGTGEKPYSCNVCGKAFVLSAHLNQHL-RVHTQ--ETLSGPSS   45 (46)
T ss_dssp             CCCCSSCCSEEETTTTEEESSHHHHHHHH-HHHSS--CCSSSCCC
T ss_pred             cccCCCCCCeECcccChhhCCHHHHHHHH-HHhCC--CCCCCCCC
Confidence            47889999999999999999999999998 88988  88999863

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=3.9e-09  Score=65.63  Aligned_cols=43  Identities=33%  Similarity=0.543  Sum_probs=37.7

Q ss_pred             cccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCc
Q psy7466         184 MKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQ  229 (338)
Q Consensus       184 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~  229 (338)
                      ++++|+++++|.|.+|++.|.....|..|+ +.|.+  ++||.|+.
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~--~k~~~C~~   45 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQ-RVHSG--EKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHG-GGSCC--SCCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHH-HHhCC--CCCCCCCC
Confidence            347889999999999999999999999998 88988  89999863

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=3.4e-09  Score=65.12  Aligned_cols=41  Identities=24%  Similarity=0.359  Sum_probs=36.4

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCS  228 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~  228 (338)
                      +.+|+++++|.|.+|++.|.....|..|+ +.|.+  ++||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~~~~~C~   44 (44)
T 2en7_A            4 GSSGTGMKPYVCNECGKAFRSKSYLIIHT-RTHTG--ESGPSSG   44 (44)
T ss_dssp             CCCSSSSSSSCCTTTCCCCSSHHHHHHHH-TTTCC--SSSSCCC
T ss_pred             CcCCCCCcCeECCCCCCccCCHHHHHHHh-hhcCC--CCCCCCC
Confidence            47888999999999999999999999998 88888  8899884

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=2.5e-09  Score=66.53  Aligned_cols=37  Identities=22%  Similarity=0.488  Sum_probs=19.0

Q ss_pred             CCceecccccccccChhhHHHHhhccCCCCCCccccCCC
Q psy7466         248 HEVFQCTQCEKYYRSQSTLDVHVSKKHPAGTGKVKRDIK  286 (338)
Q Consensus       248 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~C~~C  286 (338)
                      .++|.|++|++.|.....|..| ++.| .++++|.|+.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H-~~~H-~~~~~~~C~~C   46 (46)
T 2yu8_A           10 EKPYKCNECGKVFTQNSHLARH-RRVH-TGGKPSGPSSG   46 (46)
T ss_dssp             CSSEECSSSCCEESSSHHHHHH-THHH-HSCCCSCSCCC
T ss_pred             CCCeECCcCCchhCCHHHHHHH-HHhc-CCCCCCCCCCC
Confidence            4445555555555555555555 4445 45555555544

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=4.6e-09  Score=64.57  Aligned_cols=41  Identities=24%  Similarity=0.393  Sum_probs=36.2

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCS  228 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~  228 (338)
                      +.+|.+++||.|.+|++.|.....|..|+ ..|.+  +++|.|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~~~~~C~   44 (44)
T 2yu5_A            4 GSSGAGENPFKCSKCDRVFTQRNYLVQHE-RTHAR--KSGPSSG   44 (44)
T ss_dssp             SCCCSCCCSEECSSSSCEESSSHHHHHHH-HHCCC--CCSSCCC
T ss_pred             ccccCCCCCeECCCCCchhCCHHHHHHHh-HhcCC--CCCCCCC
Confidence            47888999999999999999999999998 88888  8899884

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=4.6e-09  Score=64.57  Aligned_cols=41  Identities=20%  Similarity=0.370  Sum_probs=36.9

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCS  228 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~  228 (338)
                      +.+|.++++|.|.+|++.|.....|..|+ ..|.+  ++||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~~~~~C~   44 (44)
T 2emb_A            4 GSSGHTRKRYECSKCQATFNLRKHLIQHQ-KTHAA--KSGPSSG   44 (44)
T ss_dssp             CSCCCCCSSEECTTTCCEESCHHHHHHHG-GGGCC--CCCTTCC
T ss_pred             ccccCCCCCeECCCCCCccCCHHHHHHHH-HHcCC--CCCcCCC
Confidence            47889999999999999999999999998 88988  8899884

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=3.8e-09  Score=65.66  Aligned_cols=41  Identities=27%  Similarity=0.433  Sum_probs=36.5

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCS  228 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~  228 (338)
                      +++|+++++|.|.+|++.|.....|..|+ +.|.+  +++|.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~k~~~C~   44 (46)
T 2yto_A            4 GSSGTGEKPYKCSDCGKAFTRKSGLHIHQ-QSHTG--ERHSGPS   44 (46)
T ss_dssp             CCCCCSCCCEECSSSCCEESSHHHHHHHH-HHHTC--CCBTTTB
T ss_pred             ccccCCCCCEECcccCCccCCHhHHHHHH-HHcCC--CCCCCCC
Confidence            47888999999999999999999999998 88888  8899886

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=4.5e-09  Score=65.29  Aligned_cols=42  Identities=31%  Similarity=0.506  Sum_probs=37.5

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCc
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQ  229 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~  229 (338)
                      +.+|+++++|.|++|++.|.....|..|+ ..|.+  ++||.|+.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~k~~~C~~   45 (46)
T 2eq3_A            4 GSSGTGEKPYECNQCGKAFSVRSSLTTHQ-AIHTG--KKPSGPSS   45 (46)
T ss_dssp             CCSSCCCCSSEETTTTEECSSHHHHHHHH-TTSCC--CCCCCSCC
T ss_pred             ccCCCCCCCeECCCCChhhCCHHHHHHHH-HHhCC--CCCCCCCC
Confidence            47889999999999999999999999998 88988  89999863

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.77  E-value=4.6e-09  Score=63.82  Aligned_cols=41  Identities=22%  Similarity=0.336  Sum_probs=36.3

Q ss_pred             cccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceec
Q psy7466         184 MKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQC  227 (338)
Q Consensus       184 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C  227 (338)
                      |+.+|.++++|.|.+|++.|.....|..|+ +.|.+  ++||.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~-~~H~~--~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQ-RSCSQ--SGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHH-HHTTC--CCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHh-hhcCC--CCCCCC
Confidence            347888999999999999999999999998 88988  889887

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.77  E-value=1.3e-09  Score=66.44  Aligned_cols=42  Identities=29%  Similarity=0.396  Sum_probs=33.4

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceecc
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCA  197 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~  197 (338)
                      |++.|+++++|.|++|++.|.....|..|+                        .+|.++++|.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~------------------------~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQ------------------------RTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHH------------------------GGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHH------------------------HhcCCCCCCCCC
Confidence            456678888888888888888888888887                        667778888774

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=3.1e-09  Score=64.64  Aligned_cols=41  Identities=24%  Similarity=0.469  Sum_probs=36.2

Q ss_pred             cccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceec
Q psy7466         184 MKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQC  227 (338)
Q Consensus       184 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C  227 (338)
                      |+.+|++++||.|..|++.|.....|..|+ +.|.+  ++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHV-LIHTG--SGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHT-HHHHS--CCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHH-HHcCC--CCCCCC
Confidence            457888999999999999999999999998 88888  888887

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=3.4e-09  Score=64.39  Aligned_cols=41  Identities=32%  Similarity=0.502  Sum_probs=36.7

Q ss_pred             cccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceec
Q psy7466         184 MKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQC  227 (338)
Q Consensus       184 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C  227 (338)
                      |+.+|+++++|.|++|++.|.....|..|+ ..|.+  ++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHI-RVHTG--SGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTG-GGTSC--CSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHH-HHhCC--CCCCCC
Confidence            347899999999999999999999999998 88988  889987

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=1.4e-09  Score=67.73  Aligned_cols=43  Identities=19%  Similarity=0.322  Sum_probs=35.8

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceeccc
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAI  198 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~  198 (338)
                      |++.|+++++|.|+.|++.|.....|..|+                        .+|.+++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~------------------------~~H~~~k~~~C~~   45 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHR------------------------GIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHH------------------------TTTTTSSCCCCSC
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHH------------------------HhhCCCCCCCCCC
Confidence            667788888889999999998888888887                        6788888888864

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=3.8e-09  Score=64.27  Aligned_cols=41  Identities=29%  Similarity=0.592  Sum_probs=36.4

Q ss_pred             cccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceec
Q psy7466         184 MKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQC  227 (338)
Q Consensus       184 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C  227 (338)
                      |+++|.++++|.|.+|++.|.....|..|+ +.|.+  ++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHL-RIHTG--SGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHT-TTTSC--CSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHH-HhcCC--CCCCCC
Confidence            457889999999999999999999999998 88988  888887

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=6.4e-09  Score=65.18  Aligned_cols=43  Identities=30%  Similarity=0.404  Sum_probs=38.9

Q ss_pred             ccccCCCcceecc--ccccccCChHHHHHHHhhhccCCCCCceecCcC
Q psy7466         185 KFTQSGRSSFKCA--ICFEYFSLLESLETHITRRHIGICEEPYQCSQC  230 (338)
Q Consensus       185 ~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C  230 (338)
                      .++|+++++|.|.  .|++.|.....|..|+ +.|.+  ++||.|.+|
T Consensus         4 ~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~-~~H~~--~k~~~C~~C   48 (48)
T 2ent_A            4 GSSGTGEKPFACTWPGCGWRFSRSDELSRHR-RSHSG--VKPSGPSSG   48 (48)
T ss_dssp             CCSSCCCCCEECCSSSCCCEESSHHHHHHHH-TTSCC--CCSCSSCCC
T ss_pred             CCCcCCCCCeECCCCCCCCccCCHHHHHHHH-HHhCC--CCCCCCCCC
Confidence            4788899999998  8999999999999998 88988  899999887

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=4e-09  Score=65.57  Aligned_cols=37  Identities=24%  Similarity=0.539  Sum_probs=18.0

Q ss_pred             CCceecccccccccChhhHHHHhhccCCCCCCccccCCC
Q psy7466         248 HEVFQCTQCEKYYRSQSTLDVHVSKKHPAGTGKVKRDIK  286 (338)
Q Consensus       248 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~C~~C  286 (338)
                      .++|.|++|++.|.+...|..| ++.| .++++|.|++|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H-~~~H-~~~~~~~C~~C   46 (46)
T 2em8_A           10 EKPYKCVECGKGYKRRLDLDFH-QRVH-TGEKLSGPSSG   46 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHH-HHHH-HCCCCCCSCCC
T ss_pred             CCCeECcccCchhCCHHHHHHH-HHHH-cCCCCCCCCCC
Confidence            3444444455555555555555 3444 44555555544

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=1.4e-09  Score=67.69  Aligned_cols=43  Identities=21%  Similarity=0.298  Sum_probs=36.0

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceeccc
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAI  198 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~  198 (338)
                      |++.|++.++|.|.+|++.|.....|..|+                        .+|.+++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~------------------------~~H~~~k~~~C~~   45 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQ------------------------RIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHH------------------------TTTSCCCCCSSCC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHH------------------------HHhCCCCCCCCCC
Confidence            667788888899999999999999998887                        6788888888863

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=1.6e-09  Score=67.45  Aligned_cols=43  Identities=23%  Similarity=0.280  Sum_probs=34.7

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceeccc
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAI  198 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~  198 (338)
                      |++.|.+.++|.|++|++.|.....|..|+                        ..|.+++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~------------------------~~H~~~~~~~C~~   45 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQ------------------------KIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHH------------------------TTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHH------------------------HHhCCCCCCCCCC
Confidence            566788888888888888888888888887                        6778888888863

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=1.6e-09  Score=67.42  Aligned_cols=43  Identities=19%  Similarity=0.276  Sum_probs=36.0

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceeccc
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAI  198 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~  198 (338)
                      |++.|++.++|.|++|++.|.....|..|+                        .+|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~------------------------~~H~~~k~~~C~~   45 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQ------------------------RVHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHH------------------------TTTSSSCCCCTTC
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHH------------------------HHcCCCCCCCCCC
Confidence            667788888899999999999998888887                        6788888888864

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=1.5e-09  Score=67.58  Aligned_cols=43  Identities=19%  Similarity=0.338  Sum_probs=35.4

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceeccc
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAI  198 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~  198 (338)
                      |++.|++.++|.|++|++.|.....|..|+                        .+|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~------------------------~~H~~~k~~~C~~   45 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHR------------------------GIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHH------------------------TTTSCSCCSSTTC
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHh------------------------HhcCCCCCCCCCC
Confidence            566788888888888888888888888887                        6778888888863

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.75  E-value=4.5e-09  Score=64.99  Aligned_cols=41  Identities=7%  Similarity=-0.042  Sum_probs=38.5

Q ss_pred             ccccccccchhhHhhhcChHHHHHHHHHhcCCCcccccccc
Q psy7466         108 KKDEILLMKALDEEMFKMDEENNKEMERISQGLEYQCSVCS  148 (338)
Q Consensus       108 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  148 (338)
                      ..++++|.|..|++.|.....|..|+++|+++++|.|++||
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             cCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            45678999999999999999999999999999999999996

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=1.6e-09  Score=67.41  Aligned_cols=44  Identities=23%  Similarity=0.329  Sum_probs=35.2

Q ss_pred             HHHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceeccc
Q psy7466         131 KEMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAI  198 (338)
Q Consensus       131 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~  198 (338)
                      .|++.|++.++|.|+.|++.|.....|..|+                        .+|.+++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~------------------------~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQ------------------------RIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHH------------------------GGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHH------------------------HHhCCCCCCCCCC
Confidence            3666788888888888888888888888887                        6677888888864

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=4e-09  Score=65.57  Aligned_cols=42  Identities=31%  Similarity=0.400  Sum_probs=36.5

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCc
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQ  229 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~  229 (338)
                      +.+|.++++|.|.+|++.|.....|..|+ +.|.+  +++|.|+.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~k~~~C~~   45 (46)
T 2emz_A            4 GSSGSGERPFKCNECGKGFGRRSHLAGHL-RLHSR--EKSSGPSS   45 (46)
T ss_dssp             CSCSSCCCSCCCSSSCCCCSSHHHHHHHH-HHHHH--TTCCCSCC
T ss_pred             CcCCCCCCCeECCCCCcccCCHHHHHHHH-HHhCC--CCCCCCCC
Confidence            47888999999999999999999999998 88888  88998863

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=1.5e-09  Score=67.46  Aligned_cols=43  Identities=23%  Similarity=0.297  Sum_probs=34.4

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceeccc
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAI  198 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~  198 (338)
                      |++.|++.++|.|++|++.|.+...|..|+                        .+|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~------------------------~~H~~~k~~~C~~   45 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQ------------------------RTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHH------------------------HTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHH------------------------HHhCCCCCCCCCC
Confidence            566778888888888888888888888887                        6677888888864

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=1.6e-09  Score=67.45  Aligned_cols=44  Identities=20%  Similarity=0.378  Sum_probs=35.9

Q ss_pred             HHHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceeccc
Q psy7466         131 KEMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAI  198 (338)
Q Consensus       131 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~  198 (338)
                      .|++.|++.++|.|++|++.|.....|..|+                        .+|.+++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~------------------------~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQ------------------------RVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHG------------------------GGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHH------------------------HHcCCCCCCCCCC
Confidence            3667788888888888988888888888886                        6778888888864

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=1.8e-09  Score=67.20  Aligned_cols=43  Identities=26%  Similarity=0.363  Sum_probs=34.8

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceeccc
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAI  198 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~  198 (338)
                      |++.|+++++|.|++|++.|.....|..|+                        ..|.++++|.|+.
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~------------------------~~H~~~k~~~C~~   45 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQ------------------------RIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHH------------------------GGGCSCCCCSCCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHH------------------------hHhCCCCCCCCCC
Confidence            566788888888888888888888888887                        6677888888863

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=1.7e-09  Score=67.24  Aligned_cols=43  Identities=19%  Similarity=0.332  Sum_probs=34.1

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceeccc
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAI  198 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~  198 (338)
                      |++.|++.++|.|++|++.|.....|..|+                        ..|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~------------------------~~H~~~k~~~C~~   45 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQ------------------------VIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHH------------------------TTTCCSCCSSCCC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHH------------------------HHhCCCCCCCCCC
Confidence            566778888888888888888888888887                        6777788888763

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=1.6e-09  Score=67.43  Aligned_cols=44  Identities=20%  Similarity=0.338  Sum_probs=36.2

Q ss_pred             HHHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceeccc
Q psy7466         131 KEMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAI  198 (338)
Q Consensus       131 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~  198 (338)
                      .|+++|++.++|.|+.|++.|.....|..|+                        .+|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~------------------------~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHR------------------------RIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHG------------------------GGTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHH------------------------HhcCCCCCcCCCC
Confidence            3667788888899999999999988888886                        6778888888864

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=7.7e-09  Score=63.91  Aligned_cols=42  Identities=31%  Similarity=0.472  Sum_probs=37.5

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCc
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQ  229 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~  229 (338)
                      ...|.++++|.|.+|++.|.....|..|+ +.|.+  +++|.|+.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~--~k~~~C~~   45 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQ-RIHTG--EKSGPSSG   45 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHH-TTTSS--CCCCCSCC
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHH-HHhCC--CCCCCCCC
Confidence            36788999999999999999999999998 88988  89999863

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=1.9e-09  Score=66.35  Aligned_cols=42  Identities=29%  Similarity=0.407  Sum_probs=35.0

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceecc
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCA  197 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~  197 (338)
                      |+++|+++++|.|++|++.|.....|..|+                        ..|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~------------------------~~H~~~~~~~C~   44 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQ------------------------KTHSGQSGPSSG   44 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHH------------------------TTSSSSCSCCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHH------------------------HHcCCCCCCCCC
Confidence            667788888888888888888888888887                        677888888874

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=6.3e-09  Score=63.98  Aligned_cols=41  Identities=20%  Similarity=0.267  Sum_probs=36.2

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCS  228 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~  228 (338)
                      +..|.++++|.|.+|++.|.....|..|+ +.|.+  ++||.|+
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~--~k~~~C~   44 (44)
T 2eou_A            4 GSSGAAKTTSECQECGKIFRHSSLLIEHQ-ALHAG--ESGPSSG   44 (44)
T ss_dssp             SCSCSSSCCCCCTTTCCCCSSHHHHHHHH-HHHTT--SCCCCCC
T ss_pred             CCCCCCCcCeECCCCCcccCCHHHHHHHH-HHHCC--CCCCCCC
Confidence            47888899999999999999999999998 88988  8899884

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=1.3e-09  Score=67.90  Aligned_cols=30  Identities=23%  Similarity=0.346  Sum_probs=22.2

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHH
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHF  161 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~  161 (338)
                      |++.|.+.++|.|.+|++.|.....|..|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~   32 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHR   32 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHH
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHH
Confidence            556677777777777777777777777776

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=1.9e-09  Score=65.56  Aligned_cols=30  Identities=23%  Similarity=0.475  Sum_probs=21.4

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHH
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHF  161 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~  161 (338)
                      |+++|.+++||.|++|++.|.....|..|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~   30 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQ   30 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHH
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHH
Confidence            345567777777777777777777777776

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.73  E-value=1.2e-09  Score=68.06  Aligned_cols=30  Identities=17%  Similarity=0.348  Sum_probs=22.2

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHH
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHF  161 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~  161 (338)
                      |++.|.+.++|.|++|++.|.....|..|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~   32 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQ   32 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHH
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHH
Confidence            556677777777777777777777777776

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=1.8e-09  Score=67.09  Aligned_cols=43  Identities=21%  Similarity=0.356  Sum_probs=35.7

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceeccc
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAI  198 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~  198 (338)
                      |++.|++.++|.|.+|++.|.....|..|+                        .+|.+++||.|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~------------------------~~H~~~k~~~C~~   45 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQ------------------------RIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHH------------------------TTTSSCCSSCSCC
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHH------------------------HHcCCCCCCCCCC
Confidence            667788888889988999998888888887                        6778888888863

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=1.7e-09  Score=67.30  Aligned_cols=43  Identities=21%  Similarity=0.325  Sum_probs=34.0

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceeccc
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAI  198 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~  198 (338)
                      |++.|.++++|.|++|++.|.....|..|+                        .+|++++||.|++
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~------------------------~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHH------------------------SVHSGERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHT------------------------TTTTSCCSCTTSC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHH------------------------HhcCCCCCCCCCC
Confidence            556778888888888888888888888886                        6777788888863

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=1.8e-09  Score=67.20  Aligned_cols=44  Identities=18%  Similarity=0.274  Sum_probs=35.4

Q ss_pred             HHHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceeccc
Q psy7466         131 KEMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCAI  198 (338)
Q Consensus       131 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~~  198 (338)
                      .|++.|++.++|.|+.|++.|.....|..|+                        .+|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~------------------------~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQ------------------------RVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHG------------------------GGGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHH------------------------HhcCCCCCCCCCC
Confidence            3666788888888888888888888888886                        6777888888863

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=7.6e-09  Score=64.24  Aligned_cols=38  Identities=26%  Similarity=0.521  Sum_probs=29.0

Q ss_pred             CCCceecccccccccChhhHHHHhhccCCCCCCccccCCC
Q psy7466         247 KHEVFQCTQCEKYYRSQSTLDVHVSKKHPAGTGKVKRDIK  286 (338)
Q Consensus       247 ~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~C~~C  286 (338)
                      +.++|.|++|++.|.+...|..| ++.| .++++|.|++|
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H-~~~H-~~~k~~~C~~C   46 (46)
T 2ep0_A            9 GEKPYKCDVCHKSFRYGSSLTVH-QRIH-TGEKPSGPSSG   46 (46)
T ss_dssp             TCCSEECSSSCCEESSHHHHHHH-HTTT-SSSCCCSCCCC
T ss_pred             CCCCeeCcccCcccCChHHHHHH-HHHh-CCCCCCCCCCC
Confidence            45677777777788888888888 6677 77778888776

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=2.2e-09  Score=66.02  Aligned_cols=42  Identities=24%  Similarity=0.287  Sum_probs=34.3

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceecc
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCA  197 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~  197 (338)
                      |++.|++.++|.|++|++.|.....|..|+                        ..|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~------------------------~~H~~~~~~~C~   44 (44)
T 2en7_A            3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHT------------------------RTHTGESGPSSG   44 (44)
T ss_dssp             SCCCSSSSSSSCCTTTCCCCSSHHHHHHHH------------------------TTTCCSSSSCCC
T ss_pred             CCcCCCCCcCeECCCCCCccCCHHHHHHHh------------------------hhcCCCCCCCCC
Confidence            666788888888888888888888888887                        677788888874

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=1.4e-09  Score=67.64  Aligned_cols=30  Identities=20%  Similarity=0.416  Sum_probs=21.7

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHH
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHF  161 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~  161 (338)
                      |++.|++.++|.|++|++.|.....|..|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~   32 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQ   32 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESSHHHHHHHH
T ss_pred             ccCCCCCCCCeeccccCChhcCHHHHHHHH
Confidence            555677777777777777777777777776

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=1.5e-09  Score=67.56  Aligned_cols=30  Identities=30%  Similarity=0.569  Sum_probs=22.4

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHH
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHF  161 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~  161 (338)
                      |++.|++.++|.|.+|++.|.....|..|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~   32 (46)
T 2em3_A            3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQ   32 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHH
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHH
Confidence            556677777777777777777777777776

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=5e-09  Score=65.09  Aligned_cols=41  Identities=32%  Similarity=0.434  Sum_probs=36.2

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCS  228 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~  228 (338)
                      +.+|+++++|.|.+|++.|.....|..|+ +.|.+  ++||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~--~~~~~C~   44 (46)
T 2en3_A            4 GSSGTGEKPFQCKECGMNFSWSCSLFKHL-RSHER--TDPSGPS   44 (46)
T ss_dssp             CCCSCCCCSEECSSSCCEESSSHHHHHHH-HHHHH--SCCSSCS
T ss_pred             ccccCCCCCeeCcccChhhCCHHHHHHHH-HHhCC--CCCCCCC
Confidence            47888999999999999999999999998 88888  8899885

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=6e-09  Score=64.06  Aligned_cols=41  Identities=17%  Similarity=0.285  Sum_probs=36.7

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCS  228 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~  228 (338)
                      +.+|+++++|.|.+|++.|.....|..|+ ..|.+  ++||.|.
T Consensus         4 ~~~H~~~~~~~C~~C~k~F~~~~~L~~H~-~~H~~--~~~~~C~   44 (44)
T 2eox_A            4 GSSGTDSKSYNCNECGKAFTRIFHLTRHQ-KIHTR--KSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCEEETTTTEEESSSHHHHTTH-HHHCC--CCCCSCC
T ss_pred             CcCCCCCCCeECcccCcccCCHHHHHHHH-HHhCC--CCCCCCC
Confidence            47889999999999999999999999998 88988  8899874

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=9.3e-09  Score=63.89  Aligned_cols=42  Identities=26%  Similarity=0.452  Sum_probs=37.0

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCc
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQ  229 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~  229 (338)
                      ++.|.++++|.|.+|++.|.....|..|+ +.|.+  ++||.|.+
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~--~k~~~C~~   45 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHR-RIHTG--EKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHH-HHHSS--CCCSSCCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHH-HHhCC--CCCCCCCC
Confidence            36788999999999999999999999998 88988  89999863

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.70  E-value=9.2e-09  Score=62.91  Aligned_cols=41  Identities=27%  Similarity=0.295  Sum_probs=36.1

Q ss_pred             cccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCc
Q psy7466         186 FTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQ  229 (338)
Q Consensus       186 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~  229 (338)
                      +.|+++++|.|..|++.|.....|..|+ +.|.+  ++||.|++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHT-LQTHS--DKSGPSSG   43 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHH-HHHTC--TTCSSSCC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHH-HhhCC--CCCccCCC
Confidence            5688889999999999999999999998 88988  88999864

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=1.9e-09  Score=67.05  Aligned_cols=30  Identities=17%  Similarity=0.367  Sum_probs=19.9

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHH
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHF  161 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~  161 (338)
                      |++.|.+.++|.|.+|++.|.....|..|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~   32 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQ   32 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHH
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHH
Confidence            445566666666766766666666666665

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=2.2e-09  Score=66.05  Aligned_cols=30  Identities=27%  Similarity=0.424  Sum_probs=23.2

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHH
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHF  161 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~  161 (338)
                      |++.|++.++|.|++|++.|.....|..|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~   32 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQ   32 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHH
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHH
Confidence            566677777888888888888888888886

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=1.7e-09  Score=67.35  Aligned_cols=38  Identities=8%  Similarity=-0.194  Sum_probs=18.5

Q ss_pred             ccccccchhhHhhhcChHHHHHHHHHhcCCCccccccc
Q psy7466         110 DEILLMKALDEEMFKMDEENNKEMERISQGLEYQCSVC  147 (338)
Q Consensus       110 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  147 (338)
                      ++++|.|..|++.|.....|..|++.|++++||.|++|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            9 GEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34444455555555444445555444444444444444

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=2.4e-09  Score=66.66  Aligned_cols=43  Identities=16%  Similarity=0.163  Sum_probs=35.0

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCC-Ccceeccc
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSG-RSSFKCAI  198 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~-~~~~~C~~  198 (338)
                      |++.|.+++||.|++|++.|.....|..|+                        .+|++ ++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~------------------------~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHE------------------------RIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHH------------------------TTCCSCCTTSSSCC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHH------------------------HHcCCCCCCCCCCC
Confidence            566788888888888888888888888887                        67777 88888863

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=1.5e-09  Score=67.46  Aligned_cols=30  Identities=23%  Similarity=0.474  Sum_probs=20.4

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHH
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHF  161 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~  161 (338)
                      |++.|.+.++|.|.+|++.|.....|..|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~   32 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQ   32 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHH
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHH
Confidence            455666666777777777777777777776

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=1.3e-08  Score=61.43  Aligned_cols=39  Identities=31%  Similarity=0.462  Sum_probs=35.2

Q ss_pred             cccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceec
Q psy7466         186 FTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQC  227 (338)
Q Consensus       186 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C  227 (338)
                      .+|+++++|.|++|++.|.....|..|+ ..|.+  ++||.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHE-RIHTG--SGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHG-GGCCC--CSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHH-HHhCC--CCCcCC
Confidence            5788899999999999999999999998 88988  889887

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=2.4e-09  Score=66.59  Aligned_cols=30  Identities=27%  Similarity=0.462  Sum_probs=22.5

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHH
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHF  161 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~  161 (338)
                      |++.|+++++|.|++|++.|.....|..|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~   32 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHK   32 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHH
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHH
Confidence            556677777777777777777777777776

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=1.5e-08  Score=62.33  Aligned_cols=40  Identities=25%  Similarity=0.349  Sum_probs=36.2

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceec
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQC  227 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C  227 (338)
                      +.+|+++++|.|.+|++.|.....|..|+ ..|.+  ++||.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~--~k~~~~   43 (44)
T 2epv_A            4 GSSGSGEKPYECNECGKAFIWKSLLIVHE-RTHAG--VSGPSS   43 (44)
T ss_dssp             CCCCCCCCSEECSSSCCEESSHHHHHHHH-GGGSS--CSCCCC
T ss_pred             CcccCCCcCeECCCCCcccCchHHHHHHH-hHhcC--CCCCCC
Confidence            47899999999999999999999999998 88988  889886

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=3.1e-09  Score=66.06  Aligned_cols=42  Identities=17%  Similarity=0.342  Sum_probs=34.6

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceecc
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCA  197 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~  197 (338)
                      |++.|++.++|.|++|++.|.....|..|+                        ..|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~------------------------~~H~~~k~~~C~   44 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQ------------------------AIHTGKKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHH------------------------TTSCCCCCCCSC
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHH------------------------HHhCCCCCCCCC
Confidence            666788888888888888888888888887                        677888888885

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.69  E-value=1.7e-09  Score=69.97  Aligned_cols=42  Identities=21%  Similarity=0.344  Sum_probs=38.2

Q ss_pred             hhhcChHHHHHHHHHhcCCCccccccccccccChhhHHHHHH
Q psy7466         121 EMFKMDEENNKEMERISQGLEYQCSVCSQVFIEKKNLSKHFF  162 (338)
Q Consensus       121 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~  162 (338)
                      +.|.....|..|++.|+++++|.|.+|++.|.....|..|++
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   45 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLE   45 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHH
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHH
Confidence            457777889999999999999999999999999999999984

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=2.1e-09  Score=66.90  Aligned_cols=30  Identities=23%  Similarity=0.547  Sum_probs=20.8

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHH
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHF  161 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~  161 (338)
                      |++.|+++++|.|++|++.|.....|..|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~   32 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHL   32 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHH
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHH
Confidence            455666677777777777777777777776

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=2.1e-09  Score=65.33  Aligned_cols=41  Identities=20%  Similarity=0.365  Sum_probs=33.4

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceec
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKC  196 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C  196 (338)
                      |++.|++++||.|++|++.|.....|..|+                        .+|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~------------------------~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHI------------------------RVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTG------------------------GGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHH------------------------HHhCCCCCCCC
Confidence            566788888888888888888888888886                        67778888876

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.67  E-value=4.1e-09  Score=68.05  Aligned_cols=37  Identities=16%  Similarity=0.321  Sum_probs=29.1

Q ss_pred             cccCCCcceeccccccccCChHHHHHHHhhhccCCCCCce
Q psy7466         186 FTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPY  225 (338)
Q Consensus       186 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~  225 (338)
                      ..|+++++|.|.+||+.|.....|..|+ +.|.+  ++||
T Consensus        17 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~kp~   53 (54)
T 1yui_A           17 SRSQSEQPATCPICYAVIRQSRNLRRHL-ELRHF--AKPG   53 (54)
T ss_dssp             HHHTSSCCEECTTTCCEESSHHHHHHHH-HHHTT--TSCC
T ss_pred             HhcCCCCCccCCCCCcccCCHHHHHHHH-HHhcc--CCCC
Confidence            6677778888888888888888888887 77777  6766

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.67  E-value=2.9e-09  Score=65.52  Aligned_cols=30  Identities=23%  Similarity=0.449  Sum_probs=23.9

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHH
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHF  161 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~  161 (338)
                      |++.|++++||.|++|++.|.....|..|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~   32 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHE   32 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHH
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHh
Confidence            566677788888888888888888888886

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=2.8e-09  Score=64.83  Aligned_cols=41  Identities=17%  Similarity=0.349  Sum_probs=32.2

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceec
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKC  196 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C  196 (338)
                      |++.|.+++||.|++|++.|.....|..|+                        ..|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~------------------------~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHL------------------------RIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHT------------------------TTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHH------------------------HhcCCCCCCCC
Confidence            456677888888888888888888888886                        66777777776

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=3e-09  Score=65.47  Aligned_cols=42  Identities=24%  Similarity=0.336  Sum_probs=32.8

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceecc
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCA  197 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~  197 (338)
                      |++.|.+.++|.|+.|++.|.....|..|+                        .+|.+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~------------------------~~H~~~~~~~C~   44 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQ------------------------KTHAAKSGPSSG   44 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHG------------------------GGGCCCCCTTCC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHH------------------------HHcCCCCCcCCC
Confidence            566777888888888888888888888886                        667777777774

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=2.5e-09  Score=66.55  Aligned_cols=30  Identities=27%  Similarity=0.429  Sum_probs=22.3

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHH
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHF  161 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~  161 (338)
                      |+++|++++||.|++|++.|.....|..|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~   32 (46)
T 2yto_A            3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQ   32 (46)
T ss_dssp             CCCCCCSCCCEECSSSCCEESSHHHHHHHH
T ss_pred             cccccCCCCCEECcccCCccCCHhHHHHHH
Confidence            556677777777777777777777777776

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=4e-09  Score=65.56  Aligned_cols=42  Identities=21%  Similarity=0.366  Sum_probs=31.6

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHhhhhhhhhhhchhhhhhhhhcccccCCCcceecc
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQKKKNLSKHFFKCLMKFTQSGRSSFKCA  197 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~~~~l~~h~~~c~~~~~h~~~~~~~C~  197 (338)
                      |++.|++.++|.|.+|++.|.....|..|+                        .+|.+++||.|+
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~------------------------~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQ------------------------RVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHG------------------------GGSCCSCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHH------------------------HHhCCCCCCCCC
Confidence            455677777888888888888888888886                        667777777775

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.65  E-value=3.5e-09  Score=64.35  Aligned_cols=30  Identities=20%  Similarity=0.437  Sum_probs=21.8

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHH
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHF  161 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~  161 (338)
                      |++.|.++++|.|+.|++.|.....|..|+
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~   31 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQ   31 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHH
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHh
Confidence            445667777777777777777777777776

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.62  E-value=2.4e-09  Score=66.59  Aligned_cols=30  Identities=20%  Similarity=0.401  Sum_probs=21.0

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHH
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHF  161 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~  161 (338)
                      |++.|.++++|.|++|++.|.....|..|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~   32 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHL   32 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHH
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHH
Confidence            455666777777777777777777777776

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.62  E-value=1.2e-08  Score=63.32  Aligned_cols=36  Identities=25%  Similarity=0.528  Sum_probs=24.3

Q ss_pred             CCCceecccccccccChhhHHHHhhccCCCC-CCccccC
Q psy7466         247 KHEVFQCTQCEKYYRSQSTLDVHVSKKHPAG-TGKVKRD  284 (338)
Q Consensus       247 ~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~-~~~~~C~  284 (338)
                      +.++|.|++|++.|.+...|..| ++.| .+ +++|.|+
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H-~~~H-~~~~~~~~C~   45 (46)
T 2eoy_A            9 KEKCFKCNKCEKTFSCSKYLTQH-ERIH-TRGVKSGPSS   45 (46)
T ss_dssp             CSCCEECSSSCCEESSSHHHHHH-HTTC-CSCCTTSSSC
T ss_pred             CCCCEECcCCCCcCCCHHHHHHH-HHHc-CCCCCCCCCC
Confidence            45566677777777777777777 5666 66 6777765

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.60  E-value=5.7e-09  Score=64.18  Aligned_cols=29  Identities=17%  Similarity=0.295  Sum_probs=16.5

Q ss_pred             HHHhcCCCccccccccccccChhhHHHHH
Q psy7466         133 MERISQGLEYQCSVCSQVFIEKKNLSKHF  161 (338)
Q Consensus       133 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~  161 (338)
                      ++.|.++++|.|++|++.|.....|..|+
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~   32 (44)
T 2eou_A            4 GSSGAAKTTSECQECGKIFRHSSLLIEHQ   32 (44)
T ss_dssp             SCSCSSSCCCCCTTTCCCCSSHHHHHHHH
T ss_pred             CCCCCCCcCeECCCCCcccCCHHHHHHHH
Confidence            34455555555666666665555555555

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.57  E-value=9.5e-09  Score=63.18  Aligned_cols=30  Identities=30%  Similarity=0.369  Sum_probs=25.3

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHH
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHF  161 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~  161 (338)
                      |++.|+++++|.|.+|++.|.....|..|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~   32 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHE   32 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHH
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHH
Confidence            566788888888888888888888888887

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.57  E-value=4.1e-09  Score=64.83  Aligned_cols=30  Identities=20%  Similarity=0.443  Sum_probs=20.8

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHH
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHF  161 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~  161 (338)
                      |++.|++++||.|++|++.|.....|..|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~   32 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQ   32 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTH
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHH
Confidence            455666677777777777777777777776

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.54  E-value=5.9e-09  Score=72.35  Aligned_cols=60  Identities=18%  Similarity=0.194  Sum_probs=29.9

Q ss_pred             HHHHHhhhccCCCCCceecCcCcccccChhHHHHHHHc-CCCceecccccccccChhhHHHHhhccC
Q psy7466         209 LETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLE-KHEVFQCTQCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       209 l~~H~~~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~-~~~~~~C~~C~k~f~~~~~L~~H~~~~H  274 (338)
                      |..|+ ..|.+  +++|.|..|+..|. ...|..|+.. +.++|.|+.|++.|. ...|..| ...|
T Consensus         5 L~~H~-~~~c~--~r~~~C~~C~~~~~-~~~L~~H~~~c~~~~~~C~~C~~~~~-~~~l~~H-~~~c   65 (75)
T 2d9k_A            5 SSGHE-ETECP--LRLAVCQHCDLELS-ILKLKEHEDYCGARTELCGNCGRNVL-VKDLKTH-PEVC   65 (75)
T ss_dssp             CSCCC-CCCCC--CCCEECSSSCCEEC-HHHHHHHHHHHHHCEEECSSSCCEEE-TTGGGTH-HHHB
T ss_pred             HHhhC-cccCC--CcccCCcccChHhh-HHHHHHHHhHcCCCceEcccCCCcCc-HHHHHHH-HHHc
Confidence            33444 44444  55555555555552 4555555422 455555555555544 3555555 3444

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.54  E-value=6e-08  Score=58.41  Aligned_cols=35  Identities=29%  Similarity=0.768  Sum_probs=26.5

Q ss_pred             CCCceecccccccccChhhHHHHhhccCCCCCCcccc
Q psy7466         247 KHEVFQCTQCEKYYRSQSTLDVHVSKKHPAGTGKVKR  283 (338)
Q Consensus       247 ~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~C  283 (338)
                      ++++|.|++|++.|.....|..| ++.| .++++|.|
T Consensus         7 ~~k~~~C~~C~k~f~~~~~L~~H-~~~H-~~~k~~~C   41 (41)
T 2ept_A            7 GQRVYECQECGKSFRQKGSLTLH-ERIH-TGSGPSSG   41 (41)
T ss_dssp             CCCCEECSSSCCEESSHHHHHHH-GGGC-CCCSCSCC
T ss_pred             CCCCeECCCCCCCcCCHHHHHHH-HHHh-CCCCCcCC
Confidence            45677777777777777778888 6677 77777776

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=6.7e-08  Score=60.35  Aligned_cols=38  Identities=21%  Similarity=0.413  Sum_probs=28.1

Q ss_pred             CCCceecc--cccccccChhhHHHHhhccCCCCCCccccCCC
Q psy7466         247 KHEVFQCT--QCEKYYRSQSTLDVHVSKKHPAGTGKVKRDIK  286 (338)
Q Consensus       247 ~~~~~~C~--~C~k~f~~~~~L~~H~~~~H~~~~~~~~C~~C  286 (338)
                      +.++|.|.  .|++.|.....|..| ++.| .++++|.|..|
T Consensus         9 ~~k~~~C~~~~C~k~f~~~~~L~~H-~~~H-~~~k~~~C~~C   48 (48)
T 2ent_A            9 GEKPFACTWPGCGWRFSRSDELSRH-RRSH-SGVKPSGPSSG   48 (48)
T ss_dssp             CCCCEECCSSSCCCEESSHHHHHHH-HTTS-CCCCSCSSCCC
T ss_pred             CCCCeECCCCCCCCccCCHHHHHHH-HHHh-CCCCCCCCCCC
Confidence            45677776  677777777777777 6677 77777877776

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=5.7e-08  Score=59.87  Aligned_cols=36  Identities=28%  Similarity=0.603  Sum_probs=27.0

Q ss_pred             CCCceecccccccccChhhHHHHhhccCCCCCCccccC
Q psy7466         247 KHEVFQCTQCEKYYRSQSTLDVHVSKKHPAGTGKVKRD  284 (338)
Q Consensus       247 ~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~C~  284 (338)
                      +.++|.|.+|++.|.+...|..| ++.| .++++|.|+
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H-~~~H-~~~k~~~C~   44 (45)
T 2epu_A            9 GQKPFECTHCGKSFRAKGNLVTH-QRIH-TGEKSGPSS   44 (45)
T ss_dssp             SCCSEEETTTTEEESSHHHHHHH-HTTT-SSCCCCCSC
T ss_pred             CCcCccCCCCCCccCChHHHHHH-HHHh-CCCCCCCCC
Confidence            45677777777777777777777 6677 777777775

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.51  E-value=4e-08  Score=59.54  Aligned_cols=34  Identities=21%  Similarity=0.514  Sum_probs=16.1

Q ss_pred             CCceecccccccccChhhHHHHhhccCCCCCCcccc
Q psy7466         248 HEVFQCTQCEKYYRSQSTLDVHVSKKHPAGTGKVKR  283 (338)
Q Consensus       248 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~C  283 (338)
                      .++|.|+.|++.|.+...|..| ++.| .++++|.|
T Consensus         9 ~k~~~C~~C~k~f~~~~~L~~H-~~~H-~~~~~~~C   42 (42)
T 2en2_A            9 EKPYKCETCGARFVQVAHLRAH-VLIH-TGSGPSSG   42 (42)
T ss_dssp             SCSEECTTTCCEESSHHHHHHH-THHH-HSCCSSCC
T ss_pred             CCCEeCCCcChhhCCHHHHHHH-HHHc-CCCCCCCC
Confidence            3444444444444444444444 3444 44444444

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.50  E-value=5.1e-08  Score=59.49  Aligned_cols=39  Identities=5%  Similarity=-0.105  Sum_probs=35.5

Q ss_pred             ccccccccchhhHhhhcChHHHHHHHHHhcCCCcccccc
Q psy7466         108 KKDEILLMKALDEEMFKMDEENNKEMERISQGLEYQCSV  146 (338)
Q Consensus       108 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  146 (338)
                      ..++++|.|..|++.|.....|..|++.|++++||.|++
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            5 SSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             CSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             cCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            456788999999999999999999999999999999974

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.50  E-value=6.5e-08  Score=64.51  Aligned_cols=39  Identities=15%  Similarity=0.227  Sum_probs=34.0

Q ss_pred             cCCCceeccc--ccccccChhhHHHHhhccCCCCCCccccCC
Q psy7466         246 EKHEVFQCTQ--CEKYYRSQSTLDVHVSKKHPAGTGKVKRDI  285 (338)
Q Consensus       246 ~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~~~~~~C~~  285 (338)
                      ++++||.|.+  |++.|...+.|..|++++| ++++||.|..
T Consensus        23 sGEKPYkC~~~~CgKaFsr~s~L~~H~rriH-TgEKP~~~~~   63 (73)
T 1x3c_A           23 SPYRPYRCVHQGCFAAFTIQQNLILHYQAVH-KSDLPAFSAE   63 (73)
T ss_dssp             CSSCSCBCCSTTCCCBCSSHHHHHHHHHHHS-SSCCCCCCCS
T ss_pred             cCCCCeECCCCCcChhHcCHHHHHHHhhhhC-CCCCCccccc
Confidence            4789999975  9999999999999966789 9999998865

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.47  E-value=6.5e-08  Score=59.95  Aligned_cols=40  Identities=8%  Similarity=-0.221  Sum_probs=36.0

Q ss_pred             cccccccccchhhHhhhcChHHHHHHHHHhcCCCcccccc
Q psy7466         107 KKKDEILLMKALDEEMFKMDEENNKEMERISQGLEYQCSV  146 (338)
Q Consensus       107 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  146 (338)
                      ...++++|.|..|++.|.....|..|++.|++++||.|++
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            6 SGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            3456788999999999999999999999999999999974

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.47  E-value=4.9e-08  Score=60.45  Aligned_cols=37  Identities=24%  Similarity=0.508  Sum_probs=19.9

Q ss_pred             hhccCCCCCceecCcCcccccChhHHHHHHHc--CCCceec
Q psy7466         215 RRHIGICEEPYQCSQCSLCFDQGSLLKAHVLE--KHEVFQC  253 (338)
Q Consensus       215 ~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~--~~~~~~C  253 (338)
                      +.|.+  +++|.|.+|++.|.....|..|+++  ++++|.|
T Consensus         5 ~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2en3_A            5 SSGTG--EKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP   43 (46)
T ss_dssp             CCSCC--CCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSC
T ss_pred             cccCC--CCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            44554  5555555555555555555555544  3445555

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.44  E-value=1.2e-07  Score=56.36  Aligned_cols=37  Identities=19%  Similarity=0.330  Sum_probs=30.7

Q ss_pred             cCCCcceeccccccccCChHHHHHHHhhhccCCCCCceec
Q psy7466         188 QSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQC  227 (338)
Q Consensus       188 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C  227 (338)
                      |+++++|.|.+||+.|...+.|..|+ +.|.+  ++||.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~--~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHM-NVHRR--DRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHH-HTTCC--SCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHH-HHcCC--Ccccee
Confidence            45678899999999999999999998 88888  788865

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.40  E-value=1.9e-07  Score=62.31  Aligned_cols=41  Identities=22%  Similarity=0.452  Sum_probs=35.3

Q ss_pred             ccCCCcceeccc--cccccCChHHHHHHHhhhccCCCCCceecCc
Q psy7466         187 TQSGRSSFKCAI--CFEYFSLLESLETHITRRHIGICEEPYQCSQ  229 (338)
Q Consensus       187 ~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~  229 (338)
                      ..++++||+|.+  |++.|...+.|..|+++.|++  ++||.|..
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTg--EKP~~~~~   63 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKS--DLPAFSAE   63 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSS--CCCCCCCS
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCC--CCCccccc
Confidence            467889999976  999999999999997568998  89998854

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.40  E-value=6.5e-08  Score=66.99  Aligned_cols=55  Identities=22%  Similarity=0.181  Sum_probs=49.8

Q ss_pred             cccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcCcccccChhHHHHHHHc
Q psy7466         186 FTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLE  246 (338)
Q Consensus       186 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~  246 (338)
                      ..+.+.+++.|..|++.|. ...|..|+  .|.+  ++||.|+.|++.|. ...|..|+.+
T Consensus        10 ~~~c~~r~~~C~~C~~~~~-~~~L~~H~--~~c~--~~~~~C~~C~~~~~-~~~l~~H~~~   64 (75)
T 2d9k_A           10 ETECPLRLAVCQHCDLELS-ILKLKEHE--DYCG--ARTELCGNCGRNVL-VKDLKTHPEV   64 (75)
T ss_dssp             CCCCCCCCEECSSSCCEEC-HHHHHHHH--HHHH--HCEEECSSSCCEEE-TTGGGTHHHH
T ss_pred             cccCCCcccCCcccChHhh-HHHHHHHH--hHcC--CCceEcccCCCcCc-HHHHHHHHHH
Confidence            7899999999999999994 99999997  6888  89999999999988 4889999876

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.38  E-value=1.1e-07  Score=68.08  Aligned_cols=61  Identities=18%  Similarity=0.270  Sum_probs=44.6

Q ss_pred             CCCceecccccccccChhhHHHHhhccCCCCCCccccCCCCCCCCCCCCcccccccCCCCCCCcccc
Q psy7466         247 KHEVFQCTQCEKYYRSQSTLDVHVSKKHPAGTGKVKRDIKPNTNILTVTPNRRSARNDSTKATVKTE  313 (338)
Q Consensus       247 ~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~~  313 (338)
                      +.++|.|++|++.|.....|..| ++.| .++++|.|..|.    ....|..|.+.+.+.......+
T Consensus        22 ~~kpy~C~~C~k~F~~~~~L~~H-~~~H-t~ekp~~C~~~~----~~~~~~~~~~~~~~~~~~~~~~   82 (88)
T 1x6f_A           22 QNSTYQCKHCDSKLQSTAELTSH-LNIH-NEEFQKRAKRQE----RRKQLLSKQKYADGAFADFKQE   82 (88)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHH-HHHH-HHHHHHHCCCCS----CCCCCCCCCCCCCCSSSCCCCC
T ss_pred             CCCCCcCCCCCCEeCCHHHHHHH-HHHh-CCCCCcccchhh----hHHHHHhhhccccccccccccc
Confidence            56778888888888888888888 6678 788888886654    5667777777776666554443

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.36  E-value=2.5e-08  Score=71.44  Aligned_cols=43  Identities=16%  Similarity=0.236  Sum_probs=30.8

Q ss_pred             cccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcCc
Q psy7466         186 FTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCS  231 (338)
Q Consensus       186 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~  231 (338)
                      .+|+++++|.|.+|++.|.....|..|+ +.|.+  ++||.|..|.
T Consensus        18 ~~H~~~kpy~C~~C~k~F~~~~~L~~H~-~~Ht~--ekp~~C~~~~   60 (88)
T 1x6f_A           18 GPRLQNSTYQCKHCDSKLQSTAELTSHL-NIHNE--EFQKRAKRQE   60 (88)
T ss_dssp             CSCCCCSCEECSSSCCEESSHHHHHHHH-HHHHH--HHHHHCCCCS
T ss_pred             cccCCCCCCcCCCCCCEeCCHHHHHHHH-HHhCC--CCCcccchhh
Confidence            4567777777777777777777777777 66776  6777776544

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.34  E-value=3.2e-07  Score=54.48  Aligned_cols=35  Identities=23%  Similarity=0.445  Sum_probs=28.0

Q ss_pred             CCCceecccccccccChhhHHHHhhccCCCCCCcccc
Q psy7466         247 KHEVFQCTQCEKYYRSQSTLDVHVSKKHPAGTGKVKR  283 (338)
Q Consensus       247 ~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~C  283 (338)
                      ++++|.|.+||+.|.....|..| ++.| .++++|.+
T Consensus         3 ~~k~~~C~~C~k~f~~~~~L~~H-~~~H-~~~k~~~~   37 (39)
T 1njq_A            3 PPRSYTCSFCKREFRSAQALGGH-MNVH-RRDRARLR   37 (39)
T ss_dssp             CSSSEECTTTCCEESSHHHHHHH-HHTT-CCSCTTTT
T ss_pred             CCCceECCCCCcccCCHHHHHHH-HHHc-CCCcccee
Confidence            46778888888888888888888 6778 78888765

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.32  E-value=3.5e-07  Score=53.50  Aligned_cols=33  Identities=24%  Similarity=0.449  Sum_probs=28.0

Q ss_pred             cccCCCcceeccccccccCChHHHHHHHhhhccC
Q psy7466         186 FTQSGRSSFKCAICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       186 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      ..|+++++|.|.+|++.|.....|..|+ ..|.+
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~-~~h~~   34 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHI-KTNHP   34 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHH-HHHCS
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHH-HHHcC
Confidence            4678888899999999999999999998 77876

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.29  E-value=2.4e-07  Score=52.84  Aligned_cols=32  Identities=25%  Similarity=0.476  Sum_probs=26.8

Q ss_pred             CceecccccccccChhhHHHHhhccCCCCCCccc
Q psy7466         249 EVFQCTQCEKYYRSQSTLDVHVSKKHPAGTGKVK  282 (338)
Q Consensus       249 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~  282 (338)
                      +||.|++||+.|.....|..| +..| .++++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H-~~~H-~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKH-ITLH-ELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHH-HHHH-TTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHH-HHHh-CCCCCCC
Confidence            478899999999999999999 6788 8888774

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.29  E-value=6.6e-07  Score=51.53  Aligned_cols=32  Identities=28%  Similarity=0.644  Sum_probs=26.5

Q ss_pred             ccCCCcceeccccccccCChHHHHHHHhhhccC
Q psy7466         187 TQSGRSSFKCAICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       187 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      +|.++++|.|.+|++.|.....|..|+ +.|.+
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~-~~H~~   32 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHL-KVHTD   32 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHH-GGGTS
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHH-HHcCC
Confidence            366788888888888888888888888 77876

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.29  E-value=5.9e-07  Score=51.67  Aligned_cols=31  Identities=39%  Similarity=0.714  Sum_probs=25.4

Q ss_pred             cCCCcceeccccccccCChHHHHHHHhhhccC
Q psy7466         188 QSGRSSFKCAICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       188 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      |.++++|.|.+|++.|.....|..|+ +.|.+
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~-~~h~~   32 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHI-REVHG   32 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHH-HHTSC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHH-HHHcC
Confidence            56778888888888888888888888 77776

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.28  E-value=5.6e-07  Score=52.55  Aligned_cols=34  Identities=29%  Similarity=0.485  Sum_probs=26.9

Q ss_pred             ccccCCCcceeccccccccCChHHHHHHHhhhccC
Q psy7466         185 KFTQSGRSSFKCAICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       185 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      .+.|++++||.|+.|++.|.....|..|+ +.|.+
T Consensus         3 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~-~~H~~   36 (37)
T 1p7a_A            3 TRGSTGIKPFQCPDCDRSFSRSDHLALHR-KRHML   36 (37)
T ss_dssp             SSTTCCSSSBCCTTTCCCBSSHHHHHHHH-GGGTC
T ss_pred             CCcCCCCCCccCCCCCcccCcHHHHHHHH-HHhcc
Confidence            46778888888888888888888888887 66765

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.27  E-value=1.6e-07  Score=54.99  Aligned_cols=33  Identities=18%  Similarity=0.317  Sum_probs=28.4

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHh
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKC  164 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h  164 (338)
                      |++.|.+++||.|+.|++.|.....|..|+++|
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H   34 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH   34 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGG
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHh
Confidence            567788999999999999999999999998544

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.19  E-value=8e-07  Score=50.59  Aligned_cols=32  Identities=25%  Similarity=0.317  Sum_probs=27.0

Q ss_pred             cceeccccccccCChHHHHHHHhhhccCCCCCcee
Q psy7466         192 SSFKCAICFEYFSLLESLETHITRRHIGICEEPYQ  226 (338)
Q Consensus       192 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~  226 (338)
                      +||.|.+||+.|.....|..|+ ..|.+  +++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~-~~H~~--~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHI-TLHEL--LGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHH-HHHTT--TCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHH-HHhCC--CCCCC
Confidence            4688999999999999999998 78888  77775

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.19  E-value=6.4e-07  Score=52.17  Aligned_cols=23  Identities=30%  Similarity=0.670  Sum_probs=11.3

Q ss_pred             CCceecCcCcccccChhHHHHHH
Q psy7466         222 EEPYQCSQCSLCFDQGSLLKAHV  244 (338)
Q Consensus       222 ~~~~~C~~C~~~f~~~~~l~~H~  244 (338)
                      ++||.|+.|+++|.....|..|+
T Consensus         6 ekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            6 PARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCCCEETTTTEECSCHHHHHHHH
T ss_pred             ccCeECCCCCCccCCHhHccCcC
Confidence            44444444444444444444444

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.15  E-value=8.5e-07  Score=51.63  Aligned_cols=30  Identities=30%  Similarity=0.422  Sum_probs=26.5

Q ss_pred             CCCceecccccccccChhhHHHHhhccCCCCCCccccCC
Q psy7466         247 KHEVFQCTQCEKYYRSQSTLDVHVSKKHPAGTGKVKRDI  285 (338)
Q Consensus       247 ~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~C~~  285 (338)
                      +++||.|+.||+.|.+.+.|..|+         ||.|..
T Consensus         5 gekp~~C~~CgK~F~~~s~L~~H~---------py~C~~   34 (36)
T 1fv5_A            5 KPARFMCLPCGIAFSSPSTLEAHQ---------AYYCSH   34 (36)
T ss_dssp             SCCCCEETTTTEECSCHHHHHHHH---------HHTSTT
T ss_pred             CccCeECCCCCCccCCHhHccCcC---------CeECcC
Confidence            689999999999999999999993         677764

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.14  E-value=1.3e-06  Score=51.12  Aligned_cols=33  Identities=21%  Similarity=0.348  Sum_probs=25.9

Q ss_pred             cccCCCcceeccccccccCChHHHHHH-HhhhccC
Q psy7466         186 FTQSGRSSFKCAICFEYFSLLESLETH-ITRRHIG  219 (338)
Q Consensus       186 ~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~~H~~  219 (338)
                      ++|++++||.|..|++.|.....|..| + ..|.+
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~~H~~   35 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVI-QKHSN   35 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHH-HHTCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHH-HHccC
Confidence            467778888888888888888888888 5 67765

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.12  E-value=2.2e-06  Score=49.61  Aligned_cols=33  Identities=27%  Similarity=0.456  Sum_probs=26.4

Q ss_pred             cccCCCcceeccccccccCChHHHHHHHhhhccC
Q psy7466         186 FTQSGRSSFKCAICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       186 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      ..|.+++||.|.+|++.|.....|..|+ +.|.+
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~-~~H~~   34 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHM-NRHST   34 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHH-HHSST
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHH-HHhcc
Confidence            3567788888888888888888888887 77765

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.11  E-value=2.1e-06  Score=49.64  Aligned_cols=33  Identities=27%  Similarity=0.554  Sum_probs=26.8

Q ss_pred             cccCCCcceeccccccccCChHHHHHHHhhhccC
Q psy7466         186 FTQSGRSSFKCAICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       186 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      ..|.++++|.|.+|++.|.....|..|+ +.|.+
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~-~~H~~   34 (36)
T 2elt_A            2 SSGSSGKPYKCPQCSYASAIKANLNVHL-RKHTG   34 (36)
T ss_dssp             CCSCCCCSEECSSSSCEESSHHHHHHHH-HHHTC
T ss_pred             CCCCCCCCCCCCCCCcccCCHHHHHHHH-HHccC
Confidence            3577788888888888888888888888 77765

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.10  E-value=2.3e-06  Score=49.53  Aligned_cols=32  Identities=22%  Similarity=0.307  Sum_probs=26.1

Q ss_pred             ccCCCcceeccccccccCChHHHHHHHhhhccC
Q psy7466         187 TQSGRSSFKCAICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       187 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      .|.+++||.|.+|++.|.....|..|+ +.|.+
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~-~~H~~   34 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHM-LVHGD   34 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHH-TTTST
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHH-HHhcC
Confidence            567778888888888888888888888 77765

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.10  E-value=4.6e-07  Score=52.96  Aligned_cols=29  Identities=31%  Similarity=0.616  Sum_probs=19.2

Q ss_pred             HhcCCCccccccccccccChhhHHHHHHH
Q psy7466         135 RISQGLEYQCSVCSQVFIEKKNLSKHFFK  163 (338)
Q Consensus       135 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~  163 (338)
                      .|+++++|.|..|++.|.....|..|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~   31 (37)
T 2elo_A            3 SGSSGRSYSCPVCEKSFSEDRLIKSHIKT   31 (37)
T ss_dssp             CCCCCCCCEETTTTEECSSHHHHHHHHHH
T ss_pred             CCCCCCCcCCCCCCCccCCHHHHHHHHHH
Confidence            45666667777777777777777777643

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.08  E-value=2.7e-06  Score=50.18  Aligned_cols=32  Identities=22%  Similarity=0.295  Sum_probs=26.0

Q ss_pred             ccCCCcceeccc--cccccCChHHHHHHHhhhccC
Q psy7466         187 TQSGRSSFKCAI--CFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       187 ~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      .+.+++||.|++  |++.|...+.|..|+ +.|++
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~-r~Htg   36 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHL-KVHTA   36 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHH-HHHSC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHH-HhcCC
Confidence            456788888876  888888888888888 77876

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.07  E-value=3.1e-07  Score=51.95  Aligned_cols=31  Identities=23%  Similarity=0.359  Sum_probs=22.8

Q ss_pred             CceecccccccccChhhHHHHhhccCCCCCCcc
Q psy7466         249 EVFQCTQCEKYYRSQSTLDVHVSKKHPAGTGKV  281 (338)
Q Consensus       249 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~  281 (338)
                      +||.|+.||+.|...+.|..| ++.| .++++|
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H-~~~H-~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKH-IKTA-FIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSS-TTSS-SSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHH-HHHH-ccCCCC
Confidence            367777777777777777777 6677 776665

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.07  E-value=2.1e-06  Score=50.00  Aligned_cols=33  Identities=33%  Similarity=0.520  Sum_probs=26.2

Q ss_pred             cccCCCcceeccccccccCCh-HHHHHHHhhhccC
Q psy7466         186 FTQSGRSSFKCAICFEYFSLL-ESLETHITRRHIG  219 (338)
Q Consensus       186 ~~h~~~~~~~C~~C~~~f~~~-~~l~~H~~~~H~~  219 (338)
                      ++|.++++|.|..|++.|... ..|..|+ +.|.+
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~-~~H~~   35 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHI-WAHEG   35 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHH-HHHHT
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHH-HhcCC
Confidence            457778888888888888888 8888887 77765

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.06  E-value=2.4e-06  Score=48.97  Aligned_cols=30  Identities=23%  Similarity=0.426  Sum_probs=16.7

Q ss_pred             CCCceecccccccccChhhHHHHhhccCCCCC
Q psy7466         247 KHEVFQCTQCEKYYRSQSTLDVHVSKKHPAGT  278 (338)
Q Consensus       247 ~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  278 (338)
                      +.++|.|.+|++.|.....|..| ++.| .++
T Consensus         4 ~~k~~~C~~C~k~f~~~~~L~~H-~~~h-~~~   33 (35)
T 2elx_A            4 GSSGYVCALCLKKFVSSIRLRSH-IREV-HGA   33 (35)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHH-HHHT-SCT
T ss_pred             CCCCeECCCCcchhCCHHHHHHH-HHHH-cCC
Confidence            34556666666666666666666 4455 443

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.04  E-value=2.9e-06  Score=48.69  Aligned_cols=30  Identities=23%  Similarity=0.444  Sum_probs=16.9

Q ss_pred             CCCceecccccccccChhhHHHHhhccCCCCC
Q psy7466         247 KHEVFQCTQCEKYYRSQSTLDVHVSKKHPAGT  278 (338)
Q Consensus       247 ~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  278 (338)
                      ++++|.|.+|++.|.....|..| ++.| .++
T Consensus         4 ~~k~~~C~~C~k~f~~~~~l~~H-~~~H-~~~   33 (35)
T 1srk_A            4 GKRPFVCRICLSAFTTKANCARH-LKVH-TDT   33 (35)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHH-HGGG-TSC
T ss_pred             CCcCeeCCCCCcccCCHHHHHHH-HHHc-CCC
Confidence            34556666666666666666666 4455 443

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.04  E-value=2.5e-06  Score=50.02  Aligned_cols=35  Identities=23%  Similarity=0.363  Sum_probs=28.1

Q ss_pred             cCCCcceecc--ccccccCChHHHHHHHhhhccCCCCCce
Q psy7466         188 QSGRSSFKCA--ICFEYFSLLESLETHITRRHIGICEEPY  225 (338)
Q Consensus       188 h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~~~  225 (338)
                      |+++++|.|.  .|++.|.....|..|+ +.|.+  +++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~-~~H~~--~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHK-HKHEM--TLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHH-HHHHT--TTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHH-HHhCC--CCCC
Confidence            4567888888  4888888888888888 77877  6665

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.03  E-value=3.5e-06  Score=48.62  Aligned_cols=32  Identities=22%  Similarity=0.379  Sum_probs=25.6

Q ss_pred             ccCCCcceeccccccccCChHHHHHHHhhhccC
Q psy7466         187 TQSGRSSFKCAICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       187 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      .|.++++|.|.+|++.|.....|..|+ +.|.+
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~-~~H~~   34 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHK-LLHTA   34 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHH-HHHSS
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHH-HHhcC
Confidence            466778888888888888888888887 77765

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.02  E-value=2.7e-06  Score=50.19  Aligned_cols=29  Identities=24%  Similarity=0.375  Sum_probs=18.5

Q ss_pred             hcCCCcccccc--ccccccChhhHHHHHHHh
Q psy7466         136 ISQGLEYQCSV--CSQVFIEKKNLSKHFFKC  164 (338)
Q Consensus       136 h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h  164 (338)
                      +++++||.|+.  |++.|...+.|..|+++|
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~H   34 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVH   34 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhc
Confidence            44566667764  777777777777766444

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.01  E-value=9.6e-07  Score=51.67  Aligned_cols=31  Identities=35%  Similarity=0.464  Sum_probs=24.3

Q ss_pred             HHhcCCCccccccccccccChhhHHHH-HHHh
Q psy7466         134 ERISQGLEYQCSVCSQVFIEKKNLSKH-FFKC  164 (338)
Q Consensus       134 ~~h~~~~~~~C~~C~~~f~~~~~L~~H-~~~h  164 (338)
                      +.|++++||.|+.|++.|.....|..| +++|
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H   33 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKH   33 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHT
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHc
Confidence            357778888888888888888888888 6444

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.01  E-value=3.1e-06  Score=52.77  Aligned_cols=32  Identities=19%  Similarity=0.437  Sum_probs=26.7

Q ss_pred             ccCCCcceeccccccccCChHHHHHHHhh-hccC
Q psy7466         187 TQSGRSSFKCAICFEYFSLLESLETHITR-RHIG  219 (338)
Q Consensus       187 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-~H~~  219 (338)
                      +|+++++|.|.+|++.|.....|..|+ + .|.+
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~-~~~H~~   33 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHY-AHSHLA   33 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHH-HHSSCC
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHh-hhhcCC
Confidence            367888899999999999999999998 5 7877

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.98  E-value=4.8e-06  Score=48.10  Aligned_cols=32  Identities=31%  Similarity=0.621  Sum_probs=25.3

Q ss_pred             ccCCCcceeccccccccCChHHHHHHHhhhccC
Q psy7466         187 TQSGRSSFKCAICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       187 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      .|.++++|.|++|++.|.....|..|+ +.|.+
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~-~~H~~   34 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHL-RIHTN   34 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHH-HHHCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHH-HHhCC
Confidence            456777888888888888888888887 77765

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.96  E-value=4.4e-06  Score=45.89  Aligned_cols=29  Identities=24%  Similarity=0.611  Sum_probs=20.5

Q ss_pred             CceecccccccccChhhHHHHhhccCCCCC
Q psy7466         249 EVFQCTQCEKYYRSQSTLDVHVSKKHPAGT  278 (338)
Q Consensus       249 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  278 (338)
                      ++|.|..|++.|.+...|..|++..| .++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H-~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIH-SGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTS-CCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHc-cCC
Confidence            36777777777777777777755667 543

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.92  E-value=6.4e-06  Score=45.07  Aligned_cols=28  Identities=18%  Similarity=0.470  Sum_probs=20.1

Q ss_pred             CceecccccccccChhhHHHHhhccCCCCC
Q psy7466         249 EVFQCTQCEKYYRSQSTLDVHVSKKHPAGT  278 (338)
Q Consensus       249 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  278 (338)
                      ++|.|..|++.|.....|..| ++.| .++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H-~~~h-~~~   29 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRH-LETH-DTD   29 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHH-HHTT-CCC
T ss_pred             cCccCCCCCcccCCHHHHHHH-HHHh-ccC
Confidence            567777777777777777777 5666 443

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.91  E-value=6.7e-06  Score=47.45  Aligned_cols=26  Identities=23%  Similarity=0.567  Sum_probs=14.1

Q ss_pred             CCceecccccccccChhhHHHHhhccC
Q psy7466         248 HEVFQCTQCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       248 ~~~~~C~~C~k~f~~~~~L~~H~~~~H  274 (338)
                      .++|.|.+|++.|.....|..| ++.|
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H-~~~H   32 (36)
T 2elv_A            7 GLLYDCHICERKFKNELDRDRH-MLVH   32 (36)
T ss_dssp             CCCEECSSSCCEESSHHHHHHH-HTTT
T ss_pred             CCCeECCCCCCccCCHHHHHHH-HHHh
Confidence            3455555555555555555555 4445

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.90  E-value=5.8e-06  Score=47.67  Aligned_cols=29  Identities=38%  Similarity=0.505  Sum_probs=19.8

Q ss_pred             hcCCCccccccccccccChhhHHHHHHHh
Q psy7466         136 ISQGLEYQCSVCSQVFIEKKNLSKHFFKC  164 (338)
Q Consensus       136 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h  164 (338)
                      |.+++||.|.+|++.|.....|..|+++|
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H   32 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLRKH   32 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHHHc
Confidence            55666777777777777777777776444

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.88  E-value=7.6e-06  Score=44.15  Aligned_cols=25  Identities=20%  Similarity=0.643  Sum_probs=17.5

Q ss_pred             CceecccccccccChhhHHHHhhccC
Q psy7466         249 EVFQCTQCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       249 ~~~~C~~C~k~f~~~~~L~~H~~~~H  274 (338)
                      ++|.|+.|++.|.....|..| ++.|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H-~~~h   26 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETH-YRVH   26 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHH-HTTS
T ss_pred             cCccCCCCCcccCCHHHHHHH-HHhc
Confidence            567777777777777777777 5555

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.87  E-value=5.6e-06  Score=45.03  Aligned_cols=27  Identities=26%  Similarity=0.543  Sum_probs=19.5

Q ss_pred             CceecccccccccChhhHHHHhhccCCCC
Q psy7466         249 EVFQCTQCEKYYRSQSTLDVHVSKKHPAG  277 (338)
Q Consensus       249 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~  277 (338)
                      +||.|+.||+.|.....|..| ++.| .+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H-~~~H-~~   27 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLH-ILLH-EN   27 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHH-HTGG-GS
T ss_pred             CCccCCCCCchhCCHHHHHHH-HHHh-cC
Confidence            367777788778777777777 5666 44

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.85  E-value=6e-06  Score=47.99  Aligned_cols=30  Identities=23%  Similarity=0.579  Sum_probs=21.9

Q ss_pred             HhcCCCccccccccccccCh-hhHHHHHHHh
Q psy7466         135 RISQGLEYQCSVCSQVFIEK-KNLSKHFFKC  164 (338)
Q Consensus       135 ~h~~~~~~~C~~C~~~f~~~-~~L~~H~~~h  164 (338)
                      +|.+++||.|+.|++.|... ..|..|+++|
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H   33 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAH   33 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHH
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhc
Confidence            36667777777777777777 7777777554

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.85  E-value=8.8e-06  Score=46.94  Aligned_cols=21  Identities=43%  Similarity=0.792  Sum_probs=9.9

Q ss_pred             CceecccccccccChhhHHHH
Q psy7466         249 EVFQCTQCEKYYRSQSTLDVH  269 (338)
Q Consensus       249 ~~~~C~~C~k~f~~~~~L~~H  269 (338)
                      ++|.|.+|++.|.....|..|
T Consensus         8 k~~~C~~C~k~f~~~~~l~~H   28 (36)
T 2elq_A            8 KPFKCSLCEYATRSKSNLKAH   28 (36)
T ss_dssp             CSEECSSSSCEESCHHHHHHH
T ss_pred             CCccCCCCCchhCCHHHHHHH
Confidence            444444444444444444444

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.85  E-value=7.1e-06  Score=44.01  Aligned_cols=25  Identities=20%  Similarity=0.535  Sum_probs=17.3

Q ss_pred             CceecccccccccChhhHHHHhhccC
Q psy7466         249 EVFQCTQCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       249 ~~~~C~~C~k~f~~~~~L~~H~~~~H  274 (338)
                      +||.|+.||+.|...+.|..| ++.|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H-~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAH-MRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHH-HTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHH-HHhc
Confidence            567777777777777777777 4555

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=97.84  E-value=5.4e-06  Score=51.64  Aligned_cols=28  Identities=21%  Similarity=0.586  Sum_probs=23.3

Q ss_pred             HhcCCCccccccccccccChhhHHHHHH
Q psy7466         135 RISQGLEYQCSVCSQVFIEKKNLSKHFF  162 (338)
Q Consensus       135 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~  162 (338)
                      +|+++++|.|.+|++.|.....|..|++
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~   28 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYA   28 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHH
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhh
Confidence            3678888999999999998888988884

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.82  E-value=1.2e-05  Score=46.82  Aligned_cols=32  Identities=25%  Similarity=0.542  Sum_probs=24.9

Q ss_pred             ccCCCcceeccc--cccccCChHHHHHHHhhhccC
Q psy7466         187 TQSGRSSFKCAI--CFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       187 ~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      .|+++++|.|.+  |++.|...+.|..|+ +.|.+
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~-~~H~~   35 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHL-RWHTG   35 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHH-HHHHT
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHH-HhcCC
Confidence            356778888874  888888888888887 77766

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.81  E-value=1.1e-05  Score=43.00  Aligned_cols=24  Identities=29%  Similarity=0.761  Sum_probs=17.9

Q ss_pred             ceecccccccccChhhHHHHhhccC
Q psy7466         250 VFQCTQCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       250 ~~~C~~C~k~f~~~~~L~~H~~~~H  274 (338)
                      ||.|..|++.|.....|..| ++.|
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H-~~~h   24 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRH-QRVH   24 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHH-GGGT
T ss_pred             CccCCCCCCcCCCHHHHHHH-HHHc
Confidence            47788888888888888888 5666

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.81  E-value=1.1e-06  Score=49.65  Aligned_cols=31  Identities=23%  Similarity=0.410  Sum_probs=26.3

Q ss_pred             cceeccccccccCChHHHHHHHhhhccCCCCCce
Q psy7466         192 SSFKCAICFEYFSLLESLETHITRRHIGICEEPY  225 (338)
Q Consensus       192 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~  225 (338)
                      +||.|..||+.|...+.|..|+ +.|.+  ++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~-~~H~~--~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHI-KTAFI--VVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSST-TSSSS--SSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHH-HHHcc--CCCC
Confidence            4688999999999999999998 88887  7775

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.81  E-value=1.9e-05  Score=52.73  Aligned_cols=42  Identities=17%  Similarity=0.196  Sum_probs=32.9

Q ss_pred             cccCCCcceeccccccccCChHHHHHHHhhhccCCCCCceecCcCc
Q psy7466         186 FTQSGRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCS  231 (338)
Q Consensus       186 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~  231 (338)
                      ..+.+++||.|.+|++.|.....|..|+ +.|.+  + .+.|.++.
T Consensus         6 ~~~~~ekpy~C~~CgK~F~~~s~L~~H~-r~Htg--~-~~~~~~~~   47 (66)
T 2epp_A            6 SGLREAGILPCGLCGKVFTDANRLRQHE-AQHGV--T-SLQLGYID   47 (66)
T ss_dssp             CSCCCCCCCCCTTTCCCCSCHHHHHHHH-HHHTT--T-SCCCCSCC
T ss_pred             CCCCCccCcCCCCCCCccCCHHHHHhhh-hhhCC--C-cccccccc
Confidence            4567789999999999999999999998 88887  3 34455544

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.81  E-value=1e-05  Score=46.54  Aligned_cols=28  Identities=7%  Similarity=-0.097  Sum_probs=13.9

Q ss_pred             cccccchhhHhhhcChHHHHHHHHHhcC
Q psy7466         111 EILLMKALDEEMFKMDEENNKEMERISQ  138 (338)
Q Consensus       111 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  138 (338)
                      +++|.|..|++.|.....|..|++.|++
T Consensus         7 ~~~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elr_A            7 GKTHLCDMCGKKFKSKGTLKSHKLLHTA   34 (36)
T ss_dssp             CSSCBCTTTCCBCSSHHHHHHHHHHHSS
T ss_pred             CCCeecCcCCCCcCchHHHHHHHHHhcC
Confidence            3445555555555555555555554443

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.80  E-value=9.4e-06  Score=43.41  Aligned_cols=25  Identities=28%  Similarity=0.614  Sum_probs=15.8

Q ss_pred             CceecccccccccChhhHHHHhhccC
Q psy7466         249 EVFQCTQCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       249 ~~~~C~~C~k~f~~~~~L~~H~~~~H  274 (338)
                      ++|.|..||+.|.....|..| ++.|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H-~~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKH-LRTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHH-HHHC
T ss_pred             cCccCCCcChhhCCHHHHHHH-HHHc
Confidence            456666666666666666666 4444

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.80  E-value=7.4e-06  Score=44.47  Aligned_cols=24  Identities=29%  Similarity=0.675  Sum_probs=17.3

Q ss_pred             ceecccccccccChhhHHHHhhccC
Q psy7466         250 VFQCTQCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       250 ~~~C~~C~k~f~~~~~L~~H~~~~H  274 (338)
                      +|.|+.|++.|.....|..| ++.|
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H-~~~h   25 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRH-YRSH   25 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHH-HHHH
T ss_pred             CeECCCCCcccCCHHHHHHH-HHHh
Confidence            57777777777777777777 5556

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.80  E-value=1.5e-05  Score=43.52  Aligned_cols=27  Identities=26%  Similarity=0.411  Sum_probs=20.2

Q ss_pred             cceeccccccccCChHHHHHHHhhhccC
Q psy7466         192 SSFKCAICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       192 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      +||.|..|++.|.....|..|+ ..|.+
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~-~~h~~   28 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHL-ETHDT   28 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHH-HTTCC
T ss_pred             cCccCCCCCcccCCHHHHHHHH-HHhcc
Confidence            5677878888887777787777 66665

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.80  E-value=6.3e-06  Score=48.24  Aligned_cols=33  Identities=33%  Similarity=0.583  Sum_probs=20.4

Q ss_pred             CCCceecc--cccccccChhhHHHHhhccCCCCCCcc
Q psy7466         247 KHEVFQCT--QCEKYYRSQSTLDVHVSKKHPAGTGKV  281 (338)
Q Consensus       247 ~~~~~~C~--~C~k~f~~~~~L~~H~~~~H~~~~~~~  281 (338)
                      ++++|.|.  .|++.|.....|..| ++.| .++++|
T Consensus         3 ~~k~~~C~~~~C~k~f~~~~~L~~H-~~~H-~~~k~~   37 (38)
T 1bhi_A            3 DDKPFLCTAPGCGQRFTNEDHLAVH-KHKH-EMTLKF   37 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHH-HHHH-HTTTTT
T ss_pred             CCcceECCCCCCCcccCCHHHHHHH-HHHh-CCCCCC
Confidence            34566666  366666666666666 5566 555554

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.80  E-value=1.4e-05  Score=43.35  Aligned_cols=27  Identities=30%  Similarity=0.454  Sum_probs=21.6

Q ss_pred             cceeccccccccCChHHHHHHHhhhccC
Q psy7466         192 SSFKCAICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       192 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      +||.|+.|++.|.....|..|+ ..|.+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~-~~H~~   27 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHI-LLHEN   27 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHH-TGGGS
T ss_pred             CCccCCCCCchhCCHHHHHHHH-HHhcC
Confidence            3688888888888888888888 77765

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.79  E-value=1.2e-05  Score=43.13  Aligned_cols=25  Identities=28%  Similarity=0.736  Sum_probs=16.2

Q ss_pred             cceeccccccccCChHHHHHHHhhhc
Q psy7466         192 SSFKCAICFEYFSLLESLETHITRRH  217 (338)
Q Consensus       192 ~~~~C~~C~~~f~~~~~l~~H~~~~H  217 (338)
                      +||.|..||+.|...+.|..|+ +.|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~-~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHM-RGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHH-TTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHH-Hhc
Confidence            4566666666666666666666 444

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.79  E-value=9.3e-06  Score=46.83  Aligned_cols=26  Identities=27%  Similarity=0.736  Sum_probs=13.1

Q ss_pred             CCceecccccccccChhhHHHHhhccC
Q psy7466         248 HEVFQCTQCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       248 ~~~~~C~~C~k~f~~~~~L~~H~~~~H  274 (338)
                      .++|.|++|++.|.....|..| ++.|
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H-~~~H   32 (36)
T 2els_A            7 GKIFTCEYCNKVFKFKHSLQAH-LRIH   32 (36)
T ss_dssp             CCCEECTTTCCEESSHHHHHHH-HHHH
T ss_pred             CCCEECCCCCceeCCHHHHHHH-HHHh
Confidence            3445555555555555555555 3444

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.79  E-value=1.4e-05  Score=42.99  Aligned_cols=26  Identities=38%  Similarity=0.779  Sum_probs=17.2

Q ss_pred             cceeccccccccCChHHHHHHHhhhcc
Q psy7466         192 SSFKCAICFEYFSLLESLETHITRRHI  218 (338)
Q Consensus       192 ~~~~C~~C~~~f~~~~~l~~H~~~~H~  218 (338)
                      ++|.|..|++.|.....|..|+ +.|.
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~-~~h~   27 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHY-RVHT   27 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHH-TTSC
T ss_pred             cCccCCCCCcccCCHHHHHHHH-HhcC
Confidence            4567777777777777777776 5553

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.78  E-value=1.4e-05  Score=42.74  Aligned_cols=25  Identities=24%  Similarity=0.654  Sum_probs=14.8

Q ss_pred             cceeccccccccCChHHHHHHHhhhc
Q psy7466         192 SSFKCAICFEYFSLLESLETHITRRH  217 (338)
Q Consensus       192 ~~~~C~~C~~~f~~~~~l~~H~~~~H  217 (338)
                      +||.|..||+.|.....|..|+ +.|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~-~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHL-RTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHH-HHC
T ss_pred             cCccCCCcChhhCCHHHHHHHH-HHc
Confidence            4566666666666666666665 444

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.77  E-value=1.5e-05  Score=44.18  Aligned_cols=28  Identities=32%  Similarity=0.705  Sum_probs=21.1

Q ss_pred             Cceecc--cccccccChhhHHHHhhccCCCCC
Q psy7466         249 EVFQCT--QCEKYYRSQSTLDVHVSKKHPAGT  278 (338)
Q Consensus       249 ~~~~C~--~C~k~f~~~~~L~~H~~~~H~~~~  278 (338)
                      +||.|+  .||+.|.....|..| ++.| .++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H-~~~H-~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRH-KRTH-TGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHH-HTTT-SCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHH-HHHh-cCC
Confidence            467887  788888888888888 6677 554

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.95  E-value=3.7e-06  Score=45.90  Aligned_cols=24  Identities=33%  Similarity=0.645  Sum_probs=13.9

Q ss_pred             ceecccccccccChhhHHHHhhccC
Q psy7466         250 VFQCTQCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       250 ~~~C~~C~k~f~~~~~L~~H~~~~H  274 (338)
                      ||.|+.||+.|.....|..| ++.|
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H-~~~H   25 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAH-VRQH   25 (29)
Confidence            45566666666666666666 4455

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.73  E-value=7.9e-06  Score=44.31  Aligned_cols=25  Identities=24%  Similarity=0.622  Sum_probs=17.6

Q ss_pred             CceecccccccccChhhHHHHhhccC
Q psy7466         249 EVFQCTQCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       249 ~~~~C~~C~k~f~~~~~L~~H~~~~H  274 (338)
                      ++|.|..|++.|.....|..| ++.|
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H-~~~H   25 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRH-LRIH   25 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHH-HHHH
T ss_pred             CCccCCCCCCccCChhHHHHH-HHHh
Confidence            367777777777777777777 5556

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.72  E-value=1.9e-05  Score=44.06  Aligned_cols=28  Identities=25%  Similarity=0.545  Sum_probs=19.5

Q ss_pred             Cceecc--cccccccChhhHHHHhhccCCCCC
Q psy7466         249 EVFQCT--QCEKYYRSQSTLDVHVSKKHPAGT  278 (338)
Q Consensus       249 ~~~~C~--~C~k~f~~~~~L~~H~~~~H~~~~  278 (338)
                      ++|.|.  .|++.|.....|..| ++.| .++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H-~~~H-~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRH-KKSH-QEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHH-HGGG-TCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHH-HHHc-cCC
Confidence            567777  677777777777777 5666 443

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.72  E-value=1.9e-05  Score=42.76  Aligned_cols=26  Identities=38%  Similarity=0.742  Sum_probs=20.1

Q ss_pred             ceeccccccccCChHHHHHHHhhhccC
Q psy7466         193 SFKCAICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       193 ~~~C~~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      ||.|..|++.|.....|..|+ ..|.+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~-~~h~~   27 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHY-RSHTN   27 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHH-HHHSC
T ss_pred             CeECCCCCcccCCHHHHHHHH-HHhcC
Confidence            577888888888888888887 66765

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.72  E-value=1.1e-05  Score=44.09  Aligned_cols=24  Identities=33%  Similarity=0.571  Sum_probs=16.3

Q ss_pred             ceecccccccccChhhHHHHhhccC
Q psy7466         250 VFQCTQCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       250 ~~~C~~C~k~f~~~~~L~~H~~~~H  274 (338)
                      +|.|..|++.|.....|..| ++.|
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H-~~~h   25 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTH-IKTK   25 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHH-HHHH
T ss_pred             CccCCCCCCccCCHHHHHHH-HHHH
Confidence            56777777777777777777 4445

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=96.88  E-value=5.2e-06  Score=45.55  Aligned_cols=25  Identities=20%  Similarity=0.662  Sum_probs=13.2

Q ss_pred             CceecccccccccChhhHHHHhhccC
Q psy7466         249 EVFQCTQCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       249 ~~~~C~~C~k~f~~~~~L~~H~~~~H  274 (338)
                      ++|.|..||+.|.....|..| ++.|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H-~~~h   26 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRH-VRIH   26 (30)
Confidence            345555555555555555555 4444

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.69  E-value=1.9e-05  Score=42.68  Aligned_cols=27  Identities=33%  Similarity=0.643  Sum_probs=21.1

Q ss_pred             cceeccccccccCChHHHHHHHhhhccC
Q psy7466         192 SSFKCAICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       192 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      +||.|..|++.|.....|..|+ +.|.+
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~-~~H~~   27 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHL-RIHSG   27 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHH-HHHHT
T ss_pred             CCccCCCCCCccCChhHHHHHH-HHhcC
Confidence            3678888888888888888887 67765

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.69  E-value=8.5e-06  Score=44.13  Aligned_cols=24  Identities=29%  Similarity=0.670  Sum_probs=15.3

Q ss_pred             ceecccccccccChhhHHHHhhccC
Q psy7466         250 VFQCTQCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       250 ~~~C~~C~k~f~~~~~L~~H~~~~H  274 (338)
                      +|.|+.|++.|.....|..| ++.|
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H-~~~h   25 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAH-LKIH   25 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHH-HHHH
T ss_pred             CCcCCCCCcccCCHHHHHHH-HHHh
Confidence            56666666666666666666 4445

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.68  E-value=3.1e-05  Score=51.66  Aligned_cols=30  Identities=23%  Similarity=0.525  Sum_probs=20.6

Q ss_pred             CCCceecccccccccChhhHHHHhhccCCCCC
Q psy7466         247 KHEVFQCTQCEKYYRSQSTLDVHVSKKHPAGT  278 (338)
Q Consensus       247 ~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~  278 (338)
                      .++||.|.+|++.|.....|..| ++.| ++.
T Consensus        10 ~ekpy~C~~CgK~F~~~s~L~~H-~r~H-tg~   39 (66)
T 2epp_A           10 EAGILPCGLCGKVFTDANRLRQH-EAQH-GVT   39 (66)
T ss_dssp             CCCCCCCTTTCCCCSCHHHHHHH-HHHH-TTT
T ss_pred             CccCcCCCCCCCccCCHHHHHhh-hhhh-CCC
Confidence            45677777777777777777777 5666 443

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.83  E-value=6.3e-06  Score=43.67  Aligned_cols=24  Identities=29%  Similarity=0.660  Sum_probs=13.7

Q ss_pred             ceecccccccccChhhHHHHhhccC
Q psy7466         250 VFQCTQCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       250 ~~~C~~C~k~f~~~~~L~~H~~~~H  274 (338)
                      ||.|+.||+.|.....|..| ++.|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H-~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANH-IRHH   25 (26)
Confidence            45566666666666666666 4444

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.66  E-value=2.5e-05  Score=42.53  Aligned_cols=26  Identities=23%  Similarity=0.423  Sum_probs=19.9

Q ss_pred             ceeccccccccCChHHHHHHHhhhccC
Q psy7466         193 SFKCAICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       193 ~~~C~~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      +|.|..|++.|.....|..|+ ..|.+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~-~~h~~   27 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHI-KTKHS   27 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHH-HHHTS
T ss_pred             CccCCCCCCccCCHHHHHHHH-HHHcc
Confidence            577888888888888888887 66655

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.82  E-value=6.9e-06  Score=43.52  Aligned_cols=25  Identities=0%  Similarity=-0.178  Sum_probs=17.0

Q ss_pred             CccccCCCCCCCCCCCCcccccccC
Q psy7466         279 GKVKRDIKPNTNILTVTPNRRSARN  303 (338)
Q Consensus       279 ~~~~C~~C~~~f~~~~~l~~H~~~~  303 (338)
                      ++|.|+.|++.|.....|..|++.|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            3567777777777777777776654

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.64  E-value=2.7e-05  Score=45.25  Aligned_cols=29  Identities=17%  Similarity=0.363  Sum_probs=20.2

Q ss_pred             hcCCCcccccc--ccccccChhhHHHHHHHh
Q psy7466         136 ISQGLEYQCSV--CSQVFIEKKNLSKHFFKC  164 (338)
Q Consensus       136 h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h  164 (338)
                      |++.++|.|.+  |++.|...+.|..|+++|
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H   33 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWH   33 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhc
Confidence            55667777774  777777777777776554

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.64  E-value=2.9e-05  Score=41.26  Aligned_cols=26  Identities=31%  Similarity=0.607  Sum_probs=18.7

Q ss_pred             ceeccccccccCChHHHHHHHhhhccC
Q psy7466         193 SFKCAICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       193 ~~~C~~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      ||.|..|++.|.....|..|+ +.|.+
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~-~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQ-RVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHG-GGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHH-HHcCC
Confidence            467777888887777777777 66654

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.62  E-value=1.9e-05  Score=48.77  Aligned_cols=33  Identities=21%  Similarity=0.483  Sum_probs=26.2

Q ss_pred             cccCCCcceecc--ccccccCChHHHHHHHhhhccC
Q psy7466         186 FTQSGRSSFKCA--ICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       186 ~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      ..|.+++||.|.  .|++.|...+.|..|+ +.|.+
T Consensus        11 ~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~-~~H~~   45 (47)
T 1ncs_A           11 VKEMPDKTFECLFPGCTKTFKRRYNIRSHI-QTHLE   45 (47)
T ss_dssp             CEEETTTEEECCCTTCCCEECSSSSHHHHH-HHHTT
T ss_pred             hccCCCCCeECCCCCCCCccCCHHHHHHHH-HHccC
Confidence            467788888885  6888888888888888 77766

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.61  E-value=2.3e-05  Score=42.30  Aligned_cols=27  Identities=30%  Similarity=0.651  Sum_probs=19.8

Q ss_pred             cceeccccccccCChHHHHHHHhhhccC
Q psy7466         192 SSFKCAICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       192 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      +||.|..|++.|.....|..|+ +.|.+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~-~~h~~   27 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHL-KIHIA   27 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHH-HHHHS
T ss_pred             CCCcCCCCCcccCCHHHHHHHH-HHhcc
Confidence            3577777887777777777777 66665

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.59  E-value=6.3e-06  Score=51.03  Aligned_cols=35  Identities=14%  Similarity=0.345  Sum_probs=27.7

Q ss_pred             HHHHHHhcCCCccccc--cccccccChhhHHHHHHHh
Q psy7466         130 NKEMERISQGLEYQCS--VCSQVFIEKKNLSKHFFKC  164 (338)
Q Consensus       130 ~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h  164 (338)
                      ..|+..|++++||.|.  .|++.|...+.|..|+++|
T Consensus         7 ~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H   43 (47)
T 1ncs_A            7 IDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTH   43 (47)
T ss_dssp             GGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHH
T ss_pred             HHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHc
Confidence            3444568888999995  6999999999999998655

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.59  E-value=4.1e-05  Score=42.30  Aligned_cols=27  Identities=33%  Similarity=0.690  Sum_probs=21.0

Q ss_pred             cceecc--ccccccCChHHHHHHHhhhccC
Q psy7466         192 SSFKCA--ICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       192 ~~~~C~--~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      +||.|.  .||+.|...+.|..|+ +.|.+
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~-~~H~~   29 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHK-RTHTG   29 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHH-TTTSC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHH-HHhcC
Confidence            367887  7888888888888887 77765

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=96.74  E-value=9.3e-06  Score=44.46  Aligned_cols=28  Identities=4%  Similarity=-0.296  Sum_probs=25.2

Q ss_pred             CCccccCCCCCCCCCCCCcccccccCCC
Q psy7466         278 TGKVKRDIKPNTNILTVTPNRRSARNDS  305 (338)
Q Consensus       278 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~  305 (338)
                      +++|.|+.|++.|.....|..|++.|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTG   28 (30)
Confidence            3689999999999999999999988764

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.73  E-value=9.7e-06  Score=44.10  Aligned_cols=26  Identities=35%  Similarity=0.741  Sum_probs=20.1

Q ss_pred             ceeccccccccCChHHHHHHHhhhccC
Q psy7466         193 SFKCAICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       193 ~~~C~~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      ||.|..|++.|.....|..|+ +.|.+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~-~~H~~   27 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHV-RQHTG   27 (29)
Confidence            677888888888888888887 66765

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.57  E-value=3.8e-05  Score=41.89  Aligned_cols=27  Identities=26%  Similarity=0.609  Sum_probs=20.3

Q ss_pred             ceeccccccccCChHHHHHHHhhhccC
Q psy7466         193 SFKCAICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       193 ~~~C~~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      ||.|..|++.|.....|..|+...|.+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccC
Confidence            678888888888888888883267765

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.56  E-value=5.3e-05  Score=42.12  Aligned_cols=27  Identities=22%  Similarity=0.379  Sum_probs=20.6

Q ss_pred             cceecc--ccccccCChHHHHHHHhhhccC
Q psy7466         192 SSFKCA--ICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       192 ~~~~C~--~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      +||.|.  .|++.|.....|..|+ +.|.+
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~-~~H~~   30 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHK-KSHQE   30 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHH-GGGTC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHH-HHccC
Confidence            567787  7888888888888887 67765

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.36  E-value=8.5e-05  Score=40.00  Aligned_cols=25  Identities=28%  Similarity=0.708  Sum_probs=18.4

Q ss_pred             Cceecc--cccccccChhhHHHHhhccC
Q psy7466         249 EVFQCT--QCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       249 ~~~~C~--~C~k~f~~~~~L~~H~~~~H  274 (338)
                      ++|.|.  .|++.|...+.|..| ++.|
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H-~~~H   27 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRH-KKIH   27 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHH-HGGG
T ss_pred             CCCCCcCCcCcCccCCHHHHHHH-HHHh
Confidence            367777  777777777777777 5666

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.31  E-value=0.00014  Score=39.05  Aligned_cols=25  Identities=24%  Similarity=0.422  Sum_probs=18.6

Q ss_pred             ceecc--ccccccCChHHHHHHHhhhcc
Q psy7466         193 SFKCA--ICFEYFSLLESLETHITRRHI  218 (338)
Q Consensus       193 ~~~C~--~C~~~f~~~~~l~~H~~~~H~  218 (338)
                      +|.|.  .|++.|...+.|..|+ +.|.
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~-~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHK-KIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHH-GGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHH-HHhC
Confidence            57777  7777777777777777 6664

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.30  E-value=0.00034  Score=46.26  Aligned_cols=53  Identities=28%  Similarity=0.517  Sum_probs=34.2

Q ss_pred             eeccc--cccccCChHHHHHHHhhhccCCC----CCceecC--cCcccccChhHHHHHHHc
Q psy7466         194 FKCAI--CFEYFSLLESLETHITRRHIGIC----EEPYQCS--QCSLCFDQGSLLKAHVLE  246 (338)
Q Consensus       194 ~~C~~--C~~~f~~~~~l~~H~~~~H~~~~----~~~~~C~--~C~~~f~~~~~l~~H~~~  246 (338)
                      |.|..  |++.|.+...|..|+...|.+..    ..+|.|.  .|++.+.....|..|++.
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~   62 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINA   62 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHH
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccc
Confidence            34544  88888888888888756787621    1256665  466666666666666654

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.24  E-value=3.7e-05  Score=51.02  Aligned_cols=50  Identities=18%  Similarity=0.442  Sum_probs=32.7

Q ss_pred             eecCc--CcccccChhHHHHHHHc---CCC------ceecc--cccccccChhhHHHHhhccC
Q psy7466         225 YQCSQ--CSLCFDQGSLLKAHVLE---KHE------VFQCT--QCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       225 ~~C~~--C~~~f~~~~~l~~H~~~---~~~------~~~C~--~C~k~f~~~~~L~~H~~~~H  274 (338)
                      |.|..  |++.|.+...|..|+..   +.+      +|.|.  -|++.+.....|..||+..|
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            34544  77777777777777643   222      57776  57777777777777766554

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.69  E-value=0.0018  Score=49.22  Aligned_cols=22  Identities=36%  Similarity=0.727  Sum_probs=13.7

Q ss_pred             CccccccccccccChhhHHHHH
Q psy7466         140 LEYQCSVCSQVFIEKKNLSKHF  161 (338)
Q Consensus       140 ~~~~C~~C~~~f~~~~~L~~H~  161 (338)
                      +++.|.+|+..|.+...+..|.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~   52 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHY   52 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHH
Confidence            3456666666666666666665

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.53  E-value=0.0043  Score=49.68  Aligned_cols=49  Identities=20%  Similarity=0.469  Sum_probs=23.2

Q ss_pred             CceecCcCcccccChhHHHHHHHc--CCCceecccccccccChhhHHHHhhccC
Q psy7466         223 EPYQCSQCSLCFDQGSLLKAHVLE--KHEVFQCTQCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       223 ~~~~C~~C~~~f~~~~~l~~H~~~--~~~~~~C~~C~k~f~~~~~L~~H~~~~H  274 (338)
                      .+..|+.|+..+ ....|..|...  ..++..|+.|+..|.. ..|..| ...+
T Consensus       109 ~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~~-~~l~~H-~~~~  159 (170)
T 3hcs_A          109 ALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMAF-EDKEIH-DQNC  159 (170)
T ss_dssp             SEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEEG-GGHHHH-HTTC
T ss_pred             eeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccCH-HHHHhH-HHhC
Confidence            344555555544 33345555432  4444555555554432 335555 4444

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.07  E-value=0.0058  Score=46.32  Aligned_cols=51  Identities=10%  Similarity=0.139  Sum_probs=42.9

Q ss_pred             cccccchhhHhhhcChHHHHHHH--HHhc-------------------------------CCCccccccccccccChhhH
Q psy7466         111 EILLMKALDEEMFKMDEENNKEM--ERIS-------------------------------QGLEYQCSVCSQVFIEKKNL  157 (338)
Q Consensus       111 ~~~~~C~~C~~~f~~~~~l~~H~--~~h~-------------------------------~~~~~~C~~C~~~f~~~~~L  157 (338)
                      ..++.|.+|+..|.+...+..|.  +.|.                               +...|.|.+|+..|.+...|
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~~  109 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGEDRSKCCPVCNMTFSSPVVA  109 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCSSCCSSCCCTTTEETTTTEECSSHHHH
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCccccccCCCCCeEcCCCCCEeCCHHHH
Confidence            45689999999999999999997  3331                               23468899999999999999


Q ss_pred             HHHH
Q psy7466         158 SKHF  161 (338)
Q Consensus       158 ~~H~  161 (338)
                      ..|+
T Consensus       110 ~~H~  113 (127)
T 1zu1_A          110 ESHY  113 (127)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9997

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=95.51  E-value=0.0032  Score=50.39  Aligned_cols=103  Identities=15%  Similarity=0.201  Sum_probs=71.8

Q ss_pred             eeccccccccCChH-----HHHHHHhhhccCCCCCceecC--cCcccccChhHHHHHHHc-CCCceecccccccccChhh
Q psy7466         194 FKCAICFEYFSLLE-----SLETHITRRHIGICEEPYQCS--QCSLCFDQGSLLKAHVLE-KHEVFQCTQCEKYYRSQST  265 (338)
Q Consensus       194 ~~C~~C~~~f~~~~-----~l~~H~~~~H~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~-~~~~~~C~~C~k~f~~~~~  265 (338)
                      ..|+.|...+....     .+..-+     .  .....|+  -|+..+. ...|..|... ...++.|+.|+..+ ....
T Consensus        54 ~~CP~Cr~~~~~~~~~~~~~~~~~i-----~--~l~v~C~n~GC~~~~~-~~~l~~H~~~C~~~~v~C~~C~~~~-~r~~  124 (170)
T 3hcs_A           54 HKCPVDNEILLENQLFPDNFAKREI-----L--SLMVKCPNEGCLHKME-LRHLEDHQAHCEFALMDCPQCQRPF-QKFH  124 (170)
T ss_dssp             SBCTTTCCBCCGGGCEECHHHHHHH-----H--TSEEECCSTTCCCEEE-GGGHHHHHTTCTTSEEECTTTCCEE-EGGG
T ss_pred             CCCCCCccCcchhhhhhhHHHHHHH-----h--hcccCCCCCCCCceec-HhHHHHHHhcCCceeeECCCCChHH-HHHH
Confidence            38999988876532     222222     1  3467784  5877654 5568899866 67889999999988 6677


Q ss_pred             HHHHhhccCCCCCCccccCCCCCCCCCCCCcccccccCCCCCC
Q psy7466         266 LDVHVSKKHPAGTGKVKRDIKPNTNILTVTPNRRSARNDSTKA  308 (338)
Q Consensus       266 L~~H~~~~H~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  308 (338)
                      |..| .... -..+...|+.|+..| ....|..|...+.++..
T Consensus       125 l~~H-~~~~-C~~r~~~C~~C~~~~-~~~~l~~H~~~~~~~~~  164 (170)
T 3hcs_A          125 INIH-ILKD-CPRRQVSCDNCAASM-AFEDKEIHDQNCPLALE  164 (170)
T ss_dssp             HHHH-HHHT-CTTCEEECTTTCCEE-EGGGHHHHHTTCCC---
T ss_pred             HHHH-hhhh-CCCCCeECCCCCCcc-CHHHHHhHHHhCcChhh
Confidence            9999 4444 567788999999987 45678888877766543

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.14  E-value=0.0059  Score=45.63  Aligned_cols=24  Identities=25%  Similarity=0.407  Sum_probs=11.4

Q ss_pred             CCceecCcCcccccChhHHHHHHH
Q psy7466         222 EEPYQCSQCSLCFDQGSLLKAHVL  245 (338)
Q Consensus       222 ~~~~~C~~C~~~f~~~~~l~~H~~  245 (338)
                      +++|.|..|++.|.+...|..|++
T Consensus        48 ekpfyC~~C~K~F~~~~~L~~H~r   71 (124)
T 1zr9_A           48 GGLHRCLACARYFIDSTNLKTHFR   71 (124)
T ss_dssp             GGCSEETTTTEECSSHHHHHHHTT
T ss_pred             CcceEcccCcchhCCHHHHHHHHh
Confidence            444444444444444444444443

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=94.99  E-value=0.0072  Score=45.18  Aligned_cols=28  Identities=29%  Similarity=0.513  Sum_probs=26.3

Q ss_pred             cccCCCcceeccccccccCChHHHHHHH
Q psy7466         186 FTQSGRSSFKCAICFEYFSLLESLETHI  213 (338)
Q Consensus       186 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~  213 (338)
                      ..|+|.++|.|..|++.|.+...|..|+
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~   70 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHF   70 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHT
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHH
Confidence            5688999999999999999999999998

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=94.83  E-value=0.018  Score=32.25  Aligned_cols=25  Identities=36%  Similarity=0.469  Sum_probs=22.0

Q ss_pred             ceecccccccccChhhHHHHhhccC
Q psy7466         250 VFQCTQCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       250 ~~~C~~C~k~f~~~~~L~~H~~~~H  274 (338)
                      .|.|++|.+.|.+...|..|....|
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H   29 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVH   29 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhcc
Confidence            4889999999999999999988888

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=93.89  E-value=0.037  Score=33.17  Aligned_cols=22  Identities=23%  Similarity=0.511  Sum_probs=10.7

Q ss_pred             ceecCcCcccccChhHHHHHHH
Q psy7466         224 PYQCSQCSLCFDQGSLLKAHVL  245 (338)
Q Consensus       224 ~~~C~~C~~~f~~~~~l~~H~~  245 (338)
                      +|.|+.|+..|.....|+.||+
T Consensus        12 ~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           12 RKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             CCCCTTTCCCCSSHHHHHHHHH
T ss_pred             ceeCCcccccccchHHHHhhhh
Confidence            4445555555554444544443

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=93.56  E-value=0.038  Score=33.15  Aligned_cols=22  Identities=27%  Similarity=0.526  Sum_probs=21.2

Q ss_pred             cceeccccccccCChHHHHHHH
Q psy7466         192 SSFKCAICFEYFSLLESLETHI  213 (338)
Q Consensus       192 ~~~~C~~C~~~f~~~~~l~~H~  213 (338)
                      .+|.|+.|+..|.....|+.||
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hm   32 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHM   32 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhh
Confidence            6799999999999999999999

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=92.34  E-value=0.095  Score=29.33  Aligned_cols=27  Identities=22%  Similarity=0.434  Sum_probs=24.3

Q ss_pred             ceeccccccccCChHHHHHHHhhhccC
Q psy7466         193 SFKCAICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       193 ~~~C~~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      .|.|++|.+.|.+...|..|....|..
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~   31 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDA   31 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhcccc
Confidence            499999999999999999999777864

>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}

Probab=89.94  E-value=0.24  Score=30.53  Aligned_cols=47  Identities=15%  Similarity=0.260  Sum_probs=38.7

Q ss_pred             ccchhhHhhhcChHHHHHHHHHhcCCCccccccc-cccccChhhHHHHHHH
Q psy7466         114 LMKALDEEMFKMDEENNKEMERISQGLEYQCSVC-SQVFIEKKNLSKHFFK  163 (338)
Q Consensus       114 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C-~~~f~~~~~L~~H~~~  163 (338)
                      ..|.+|.....+...|..|.......   +|++| .-.-.+.+.|+.|.++
T Consensus         4 mvC~~C~~ECET~kEl~~H~~sCp~g---qCPYC~~~~e~tesAlQaHfkv   51 (57)
T 2k9h_A            4 MVCDVCHHECETAKELESHRQSCING---QCPYCMTITEATESALQAHYSI   51 (57)
T ss_dssp             TBCTTTCCBCSSTTTHHHHHHHHTTT---BCTTTCCBCCSSHHHHHHHHTT
T ss_pred             chhhHHHhhhhhHHHHHHHhccCCCC---CCCcccCcCCcCHHHHHHHHHH
Confidence            46999999999999999998887655   79998 4556788999999754

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=87.17  E-value=0.3  Score=26.43  Aligned_cols=24  Identities=29%  Similarity=0.581  Sum_probs=19.8

Q ss_pred             eecccccccccChhhHHHHhhccC
Q psy7466         251 FQCTQCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       251 ~~C~~C~k~f~~~~~L~~H~~~~H  274 (338)
                      --|..|.+.|+.-.+|..|++..|
T Consensus        10 qhcrfckkkysdvknlikhire~h   33 (37)
T 2elu_A           10 QHCRFCKKKYSDVKNLIKHIRDAH   33 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhc
Confidence            358888888888888888888777

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=86.47  E-value=0.27  Score=33.01  Aligned_cols=13  Identities=31%  Similarity=0.894  Sum_probs=8.1

Q ss_pred             ceecccccccccC
Q psy7466         250 VFQCTQCEKYYRS  262 (338)
Q Consensus       250 ~~~C~~C~k~f~~  262 (338)
                      .|+|+.||..|--
T Consensus        51 ~FkCP~CgEEFyG   63 (95)
T 2k5c_A           51 VFKCPVCGEEFYG   63 (95)
T ss_dssp             EEECTTTCCEEET
T ss_pred             hhcCCCccHHHhc
Confidence            4667777666643

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=85.56  E-value=0.13  Score=34.71  Aligned_cols=49  Identities=14%  Similarity=0.193  Sum_probs=39.5

Q ss_pred             ccccccchhhHhhhcChHHHHHHHHHhcCCCccccccccccccChhhHHHH
Q psy7466         110 DEILLMKALDEEMFKMDEENNKEMERISQGLEYQCSVCSQVFIEKKNLSKH  160 (338)
Q Consensus       110 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H  160 (338)
                      ....|.|..|+.++. ...|..|.....+-..|.|--|+..|.. ..++.|
T Consensus         7 ~MV~F~C~~Cgd~lK-K~kv~~H~~~Cr~~~~~SCIDC~~~F~~-~~y~~H   55 (79)
T 1wjv_A            7 GMVFFTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFWG-DDYKSH   55 (79)
T ss_dssp             CCCEEEESSSCCEEE-TTHHHHHHHHCTTCCEEEETTTTEEEEG-GGTTTC
T ss_pred             ceeEEEcCCCCCeee-cccchhHHhhCCCCCcEEecccCCeeCC-CCEeCE
Confidence            356789999999885 5679999887776668999999999985 456666

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=84.97  E-value=0.31  Score=32.83  Aligned_cols=44  Identities=20%  Similarity=0.513  Sum_probs=22.8

Q ss_pred             ceecCcCcccccChhHHHHHHHc--CCCceecccccccccChhhHHHH
Q psy7466         224 PYQCSQCSLCFDQGSLLKAHVLE--KHEVFQCTQCEKYYRSQSTLDVH  269 (338)
Q Consensus       224 ~~~C~~C~~~f~~~~~l~~H~~~--~~~~~~C~~C~k~f~~~~~L~~H  269 (338)
                      .|.|..||..+..+ .|..|...  +-..|.|-.|++.|.. ..++.|
T Consensus        10 ~F~C~~Cgd~lKK~-kv~~H~~~Cr~~~~~SCIDC~~~F~~-~~y~~H   55 (79)
T 1wjv_A           10 FFTCNACGESVKKI-QVEKHVSNCRNCECLSCIDCGKDFWG-DDYKSH   55 (79)
T ss_dssp             EEEESSSCCEEETT-HHHHHHHHCTTCCEEEETTTTEEEEG-GGTTTC
T ss_pred             EEEcCCCCCeeecc-cchhHHhhCCCCCcEEecccCCeeCC-CCEeCE
Confidence            45666666554433 35556444  2235666666666653 334444

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=83.33  E-value=0.7  Score=24.98  Aligned_cols=26  Identities=27%  Similarity=0.454  Sum_probs=22.1

Q ss_pred             eeccccccccCChHHHHHHHhhhccC
Q psy7466         194 FKCAICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       194 ~~C~~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      -.|.+|.+.|....+|..|++..|..
T Consensus        10 qhcrfckkkysdvknlikhire~hd~   35 (37)
T 2elu_A           10 QHCRFCKKKYSDVKNLIKHIRDAHDP   35 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            46999999999999999999766643

>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}

Probab=82.30  E-value=2.1  Score=26.38  Aligned_cols=45  Identities=22%  Similarity=0.310  Sum_probs=27.7

Q ss_pred             eecCcCcccccChhHHHHHHHcCCCceeccccc-ccccChhhHHHHh
Q psy7466         225 YQCSQCSLCFDQGSLLKAHVLEKHEVFQCTQCE-KYYRSQSTLDVHV  270 (338)
Q Consensus       225 ~~C~~C~~~f~~~~~l~~H~~~~~~~~~C~~C~-k~f~~~~~L~~H~  270 (338)
                      -.|++|.....+...|..|...- ..-+|++|- -.-.+.++|+.|.
T Consensus         4 mvC~~C~~ECET~kEl~~H~~sC-p~gqCPYC~~~~e~tesAlQaHf   49 (57)
T 2k9h_A            4 MVCDVCHHECETAKELESHRQSC-INGQCPYCMTITEATESALQAHY   49 (57)
T ss_dssp             TBCTTTCCBCSSTTTHHHHHHHH-TTTBCTTTCCBCCSSHHHHHHHH
T ss_pred             chhhHHHhhhhhHHHHHHHhccC-CCCCCCcccCcCCcCHHHHHHHH
Confidence            35777777777777777776651 011566664 3456677777773

>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X

Probab=80.14  E-value=0.73  Score=27.47  Aligned_cols=11  Identities=27%  Similarity=0.966  Sum_probs=4.4

Q ss_pred             eeccccccccc
Q psy7466         251 FQCTQCEKYYR  261 (338)
Q Consensus       251 ~~C~~C~k~f~  261 (338)
                      |.|--||+.|+
T Consensus         4 Y~C~rCg~~fs   14 (48)
T 4ayb_P            4 YRCGKCWKTFT   14 (48)
T ss_dssp             -CCCCTTTTCC
T ss_pred             EEeeccCCCcc
Confidence            44444444443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	338
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.001
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	0.002

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.8 bits (78), Expect = 0.001
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%)

Query: 215 RRHIGICEEPYQCSQCSLCFDQGSLLKAHVLEKH 248
           R H G  E+PY+C  C   F Q   +K H+L+KH
Sbjct: 1   RTHSG--EKPYECYICHARFTQSGTMKMHILQKH 32

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.9 bits (77), Expect = 0.002
 Identities = 12/50 (24%), Positives = 19/50 (38%), Gaps = 3/50 (6%)

Query: 222 EEPYQCSQCSLCFDQGSLLKAHVLEKH--EVFQCTQCEKYYRSQSTLDVH 269
           ++ Y C QC   F   S    H+        + C  C K ++ +  L  H
Sbjct: 1   DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGH 49

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	338
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.5
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.47
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.22
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.1
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.87
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.84
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.83
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.8
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.79
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.77
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.74
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.74
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.73
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.72
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.71
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.71
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.71
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.66
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.65
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.6
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.6
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.58
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.54
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.52
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.51
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.41
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.37
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.34
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.29
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.28
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.27
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.22
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.2
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.1
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.05
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.05
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.98
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.98
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.98
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	97.92
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.92
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.91
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.88
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.88
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.82
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.67
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.63
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.61
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.58
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.52
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.4
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.37
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.34
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.3
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.24
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.21
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.15
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.12
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.1
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.08
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.05
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.05
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.93
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.89
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.87
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.85
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.82
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	96.8
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.78
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.73
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.69
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.68
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.66
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.65
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.62
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	96.54
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.5
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.41
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.31
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.29
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.25
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.07
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.98
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.91
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.68
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.56
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.55
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.45
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.39
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.35
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.26
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.06
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	94.17
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	94.12
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	94.1
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	93.95
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	93.77
d1y0jb1	36	U-shaped transcription factor, different fingers {	93.29
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	93.18
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	92.71
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	91.3
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	91.04
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	90.71
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	90.3
d1y0jb1	36	U-shaped transcription factor, different fingers {	89.84
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	89.77
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	89.4
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	89.17
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	89.11
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	88.7
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	88.46
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	88.41
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	88.2
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	87.54
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	87.07
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	86.72
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	86.53
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	86.26
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	86.17
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	85.72
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	84.93
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	83.87
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	82.71
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	82.22
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	80.98
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	80.32

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=3.2e-15  Score=95.19  Aligned_cols=53  Identities=21%  Similarity=0.276  Sum_probs=50.1

Q ss_pred             cccccchhhHhhhcChHHHHHHHHHhcCCCccccccccccccChhhHHHHHHHh
Q psy7466         111 EILLMKALDEEMFKMDEENNKEMERISQGLEYQCSVCSQVFIEKKNLSKHFFKC  164 (338)
Q Consensus       111 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h  164 (338)
                      +++|.|. ||+.|.....|..|+++|++++||.|.+||+.|...+.|..|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            4789995 9999999999999999999999999999999999999999999654

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=1.7e-14  Score=91.73  Aligned_cols=52  Identities=25%  Similarity=0.543  Sum_probs=39.5

Q ss_pred             CcceeccccccccCChHHHHHHHhhhccCCCCCceecCcCcccccChhHHHHHHHc
Q psy7466         191 RSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSLCFDQGSLLKAHVLE  246 (338)
Q Consensus       191 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~~~f~~~~~l~~H~~~  246 (338)
                      ++||.|. ||+.|.....|..|+ +.|.+  ++||.|.+||++|.....|..|+++
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~-~~Ht~--ekpy~C~~C~k~F~~~~~L~~H~r~   52 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHM-SMHLG--LRPYGCGVCGKKFKMKHHLVGHMKI   52 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHH-HHHSC--CCSEECTTTSCEESSSHHHHHHHTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHh-hcccc--ccCCcCCCcCCEecCHHHHHHHHhc
Confidence            4677784 888888888888887 77777  7777777777777777777777754

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=2.8e-12  Score=74.30  Aligned_cols=37  Identities=19%  Similarity=0.431  Sum_probs=33.5

Q ss_pred             CCceecccccccccChhhHHHHhhccCCCCCCccccCC
Q psy7466         248 HEVFQCTQCEKYYRSQSTLDVHVSKKHPAGTGKVKRDI  285 (338)
Q Consensus       248 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~C~~  285 (338)
                      ++||.|.+||+.|...++|..|++.+| ++++||.|.+
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~H-t~ekpy~C~i   39 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVH-TSERPHKCQV   39 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTS-CCCCCCCSSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCcc-CCCcCcCCcC
Confidence            689999999999999999999977789 9999999974

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=3e-11  Score=69.85  Aligned_cols=38  Identities=29%  Similarity=0.524  Sum_probs=32.4

Q ss_pred             CCcceeccccccccCChHHHHHHHhhhccCCCCCceecCc
Q psy7466         190 GRSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQ  229 (338)
Q Consensus       190 ~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~  229 (338)
                      .++||+|.+||+.|...+.|..|+++.|++  ++||.|++
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~--ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTS--ERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCC--CCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCC--CcCcCCcC
Confidence            357899999999999999999998557998  89999874

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.87  E-value=5.6e-10  Score=64.47  Aligned_cols=35  Identities=34%  Similarity=0.592  Sum_probs=30.9

Q ss_pred             cccccCCCcceeccccccccCChHHHHHHHhhhccC
Q psy7466         184 MKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       184 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      |+.+|++++||.|++||+.|...++|..|+ +.|++
T Consensus         3 H~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~-r~HtG   37 (38)
T d2cota2           3 SEWQQRERRRYKCDECGKSFSHSSDLSKHR-RTHTG   37 (38)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHH-TTTCC
T ss_pred             cCcccCCCCCEecCCCCceeeCHHHHHHhC-ccCCC
Confidence            358899999999999999999999999998 88887

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.84  E-value=2.4e-10  Score=65.62  Aligned_cols=33  Identities=18%  Similarity=0.317  Sum_probs=30.0

Q ss_pred             HHHHhcCCCccccccccccccChhhHHHHHHHh
Q psy7466         132 EMERISQGLEYQCSVCSQVFIEKKNLSKHFFKC  164 (338)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h  164 (338)
                      |.+.|++++||.|+.|+++|...+.|..|+++|
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H   34 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH   34 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGG
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcC
Confidence            567899999999999999999999999998665

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=1.1e-09  Score=60.67  Aligned_cols=32  Identities=34%  Similarity=0.550  Sum_probs=27.1

Q ss_pred             ccCCCcceeccccccccCChHHHHHHHhhhccC
Q psy7466         187 TQSGRSSFKCAICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       187 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      +|++++||.|..||+.|...+.|..|+ +.|++
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~-r~Htg   32 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQ-RVHTG   32 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHH-HGGGC
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhc-cccCC
Confidence            478888888888888888888888888 88876

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.80  E-value=1.4e-09  Score=62.33  Aligned_cols=35  Identities=29%  Similarity=0.458  Sum_probs=28.0

Q ss_pred             cccccCCCcceeccccccccCChHHHHHHHhhhccC
Q psy7466         184 MKFTQSGRSSFKCAICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       184 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      |.++|++++||.|.+|++.|...+.|..|+ +.|..
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~-r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHR-KRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHH-GGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHH-hcCcC
Confidence            347888888888888888888888888887 77764

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=3.3e-10  Score=65.49  Aligned_cols=33  Identities=24%  Similarity=0.444  Sum_probs=29.2

Q ss_pred             HHHHHhcCCCccccccccccccChhhHHHHHHH
Q psy7466         131 KEMERISQGLEYQCSVCSQVFIEKKNLSKHFFK  163 (338)
Q Consensus       131 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~  163 (338)
                      +|+++|++++||.|+.||++|...+.|..|+++
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~   34 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRT   34 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTT
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCcc
Confidence            477889999999999999999999999999833

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.77  E-value=2.3e-09  Score=60.85  Aligned_cols=34  Identities=29%  Similarity=0.645  Sum_probs=26.2

Q ss_pred             cccCCCcceeccccccccCChHHHHHHHhhhccC
Q psy7466         186 FTQSGRSSFKCAICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       186 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      ++|+|++||.|++|++.|...++|..|+++.|..
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            3678888888888888888888888887555643

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.74  E-value=3.1e-09  Score=60.37  Aligned_cols=33  Identities=24%  Similarity=0.504  Sum_probs=25.2

Q ss_pred             cccCCCcceeccccccccCChHHHHHHHhhhccC
Q psy7466         186 FTQSGRSSFKCAICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       186 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      ++|+|++||+|.+||+.|...+.|..|+ +.|.+
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~-r~H~~   33 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHF-KRYHD   33 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHH-HHTTC
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhC-cccCC
Confidence            3577888888888888888888888887 66654

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.74  E-value=1.5e-09  Score=60.03  Aligned_cols=28  Identities=25%  Similarity=0.562  Sum_probs=16.1

Q ss_pred             cCCCceecccccccccChhhHHHHhhccC
Q psy7466         246 EKHEVFQCTQCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       246 ~~~~~~~C~~C~k~f~~~~~L~~H~~~~H  274 (338)
                      ++++||.|..||++|...+.|..| +++|
T Consensus         3 Tgekpy~C~~Cgk~F~~~~~L~~H-~r~H   30 (33)
T d1x6ea1           3 SGEKPYGCVECGKAFSRSSILVQH-QRVH   30 (33)
T ss_dssp             TTCCCEECSSSCCEESSHHHHHHH-HHGG
T ss_pred             CCCCCeeCCCCCCEeCchHHhHhh-cccc
Confidence            345555555555555555555555 5555

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.73  E-value=2.4e-09  Score=57.44  Aligned_cols=29  Identities=24%  Similarity=0.562  Sum_probs=24.5

Q ss_pred             CceecccccccccChhhHHHHhhccCCCCCC
Q psy7466         249 EVFQCTQCEKYYRSQSTLDVHVSKKHPAGTG  279 (338)
Q Consensus       249 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~  279 (338)
                      +||.|++||+.|...+.|..| +++| +|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H-~r~H-TgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRH-YRSH-TNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHH-HHTT-TSSC
T ss_pred             CcCCCCCCCCCCCCchHcccc-cCcc-cCCC
Confidence            588888899999999999999 8888 7764

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.72  E-value=4.2e-09  Score=59.02  Aligned_cols=31  Identities=29%  Similarity=0.676  Sum_probs=26.0

Q ss_pred             cCCCcceeccccccccCChHHHHHHHhhhccC
Q psy7466         188 QSGRSSFKCAICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       188 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      |+|++||.|.+|++.|...++|..|+ +.|+.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~-r~Ht~   32 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHL-KVHTD   32 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHH-GGGTS
T ss_pred             CCCCccccCCCCCCcccChHHHHHHc-cccCC
Confidence            67888888888888888888888888 77875

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=2.8e-10  Score=64.73  Aligned_cols=28  Identities=21%  Similarity=0.640  Sum_probs=18.2

Q ss_pred             CCCceecccccccccChhhHHHHhhccC
Q psy7466         247 KHEVFQCTQCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       247 ~~~~~~C~~C~k~f~~~~~L~~H~~~~H  274 (338)
                      +++||.|++|++.|+..++|..|+++.|
T Consensus         5 gekP~~C~~C~k~F~~~~~L~~H~~~~H   32 (36)
T d2ct1a2           5 GEKPYECYICHARFTQSGTMKMHILQKH   32 (36)
T ss_dssp             CCCSEECTTTCCEESCHHHHHHHHHHHS
T ss_pred             CCCCEeCCCCcccccchHHHHHHccccc
Confidence            5666666666666666666666655555

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.71  E-value=2.5e-09  Score=60.00  Aligned_cols=29  Identities=24%  Similarity=0.463  Sum_probs=24.7

Q ss_pred             hcCCCccccccccccccChhhHHHHHHHh
Q psy7466         136 ISQGLEYQCSVCSQVFIEKKNLSKHFFKC  164 (338)
Q Consensus       136 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h  164 (338)
                      |+|++||.|.+|++.|...+.|..|+++|
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~H   30 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVH   30 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGG
T ss_pred             CCCCccccCCCCCCcccChHHHHHHcccc
Confidence            67888999999999999999999998655

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=2e-09  Score=61.17  Aligned_cols=31  Identities=29%  Similarity=0.548  Sum_probs=26.8

Q ss_pred             HHhcCCCccccccccccccChhhHHHHHHHh
Q psy7466         134 ERISQGLEYQCSVCSQVFIEKKNLSKHFFKC  164 (338)
Q Consensus       134 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h  164 (338)
                      ++|++++||.|.+||++|...+.|..|+++|
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H   31 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRY   31 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHT
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCccc
Confidence            3688999999999999999999999998665

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.66  E-value=2.3e-09  Score=56.83  Aligned_cols=26  Identities=27%  Similarity=0.675  Sum_probs=18.0

Q ss_pred             CCceecccccccccChhhHHHHhhccC
Q psy7466         248 HEVFQCTQCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       248 ~~~~~C~~C~k~f~~~~~L~~H~~~~H  274 (338)
                      ++||.|++|++.|...+.|..| +++|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H-~r~H   26 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTH-IRTH   26 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHH-HHHH
T ss_pred             CcCccCCCCcCEeccccccccc-CCCc
Confidence            4667777777777777777777 6666

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.65  E-value=3.9e-09  Score=56.52  Aligned_cols=29  Identities=28%  Similarity=0.588  Sum_probs=23.2

Q ss_pred             CceecccccccccChhhHHHHhhccCCCCCC
Q psy7466         249 EVFQCTQCEKYYRSQSTLDVHVSKKHPAGTG  279 (338)
Q Consensus       249 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~  279 (338)
                      +||.|++||+.|...+.|..| +++| +|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H-~r~H-tgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKH-IKTH-QNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHH-HHGG-GCCC
T ss_pred             CCEECCcCCCeecchHHhhhh-cCcc-CCcC
Confidence            578888888888888888888 7788 7654

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.60  E-value=8e-09  Score=54.67  Aligned_cols=28  Identities=46%  Similarity=0.926  Sum_probs=19.5

Q ss_pred             CcceeccccccccCChHHHHHHHhhhccC
Q psy7466         191 RSSFKCAICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       191 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      ++||+|.+|++.|...+.|..|+ +.|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~-r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHI-RTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHH-HHHHC
T ss_pred             CcCccCCCCcCEecccccccccC-CCccC
Confidence            35677777777777777777777 66654

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.60  E-value=4.8e-09  Score=59.30  Aligned_cols=33  Identities=27%  Similarity=0.528  Sum_probs=29.1

Q ss_pred             eeccc--ccccccChhhHHHHhhccCCCCCCccccCC
Q psy7466         251 FQCTQ--CEKYYRSQSTLDVHVSKKHPAGTGKVKRDI  285 (338)
Q Consensus       251 ~~C~~--C~k~f~~~~~L~~H~~~~H~~~~~~~~C~~  285 (338)
                      |.|+.  ||+.|.+.+.|.+| ++.| +|++||.|++
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H-~r~H-tgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEH-MKLH-SDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHH-HHHH-HTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccc-cCee-CCCCCEeCCC
Confidence            78887  99999999999999 7889 9999999974

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.58  E-value=1.4e-08  Score=54.44  Aligned_cols=27  Identities=37%  Similarity=0.712  Sum_probs=22.8

Q ss_pred             cceeccccccccCChHHHHHHHhhhccC
Q psy7466         192 SSFKCAICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       192 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      +||.|++||+.|...+.|..|+ +.|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~-r~HTg   27 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHY-RSHTN   27 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHH-HTTTS
T ss_pred             CcCCCCCCCCCCCCchHccccc-CcccC
Confidence            4788888888888888888888 88887

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=9.6e-09  Score=52.95  Aligned_cols=25  Identities=28%  Similarity=0.631  Sum_probs=19.1

Q ss_pred             CceecccccccccChhhHHHHhhccC
Q psy7466         249 EVFQCTQCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       249 ~~~~C~~C~k~f~~~~~L~~H~~~~H  274 (338)
                      +||.|..||+.|...+.|..| +++|
T Consensus         1 KPy~C~eCgK~F~~~s~L~~H-qriH   25 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINH-QRIH   25 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHH-HHHH
T ss_pred             CCccCCCCcCeeccCcccccC-ccCC
Confidence            577888888888888888888 6665

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.52  E-value=2e-08  Score=56.68  Aligned_cols=33  Identities=27%  Similarity=0.643  Sum_probs=29.3

Q ss_pred             eeccc--cccccCChHHHHHHHhhhccCCCCCceecCc
Q psy7466         194 FKCAI--CFEYFSLLESLETHITRRHIGICEEPYQCSQ  229 (338)
Q Consensus       194 ~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~  229 (338)
                      |.|++  ||+.|.....|..|+ +.|++  ++||.|+.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~-r~Htg--ekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHM-KLHSD--TRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHH-HHHHT--SCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhcccc-CeeCC--CCCEeCCC
Confidence            78887  999999999999999 88999  99999863

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.51  E-value=2.5e-08  Score=53.29  Aligned_cols=27  Identities=30%  Similarity=0.594  Sum_probs=22.7

Q ss_pred             cceeccccccccCChHHHHHHHhhhccC
Q psy7466         192 SSFKCAICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       192 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      +||.|++||+.|...+.|..|+ +.|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~-r~Htg   27 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHI-KTHQN   27 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHH-HGGGC
T ss_pred             CCEECCcCCCeecchHHhhhhc-CccCC
Confidence            4788888888888888888888 88887

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.41  E-value=4.6e-08  Score=50.35  Aligned_cols=25  Identities=36%  Similarity=0.549  Sum_probs=17.0

Q ss_pred             cceeccccccccCChHHHHHHHhhhc
Q psy7466         192 SSFKCAICFEYFSLLESLETHITRRH  217 (338)
Q Consensus       192 ~~~~C~~C~~~f~~~~~l~~H~~~~H  217 (338)
                      +||+|..||+.|...+.|..|+ +.|
T Consensus         1 KPy~C~eCgK~F~~~s~L~~Hq-riH   25 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQ-RIH   25 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHH-HHH
T ss_pred             CCccCCCCcCeeccCcccccCc-cCC
Confidence            4677777777777777777776 555

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.37  E-value=7.6e-08  Score=51.69  Aligned_cols=28  Identities=32%  Similarity=0.669  Sum_probs=22.3

Q ss_pred             Cceeccc--ccccccChhhHHHHhhccCCCCC
Q psy7466         249 EVFQCTQ--CEKYYRSQSTLDVHVSKKHPAGT  278 (338)
Q Consensus       249 ~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~~  278 (338)
                      +||.|++  ||+.|...+.|..| +++| +|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H-~r~H-tGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTH-LRSH-TGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHH-HHHT-TTC
T ss_pred             CCeeCCCCCCCceECChhHhhhh-cCcC-cCC
Confidence            5788887  88888888888888 7788 664

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.34  E-value=6.6e-08  Score=58.15  Aligned_cols=32  Identities=22%  Similarity=0.554  Sum_probs=27.3

Q ss_pred             ccCCCcceeccc--cccccCChHHHHHHHhhhccC
Q psy7466         187 TQSGRSSFKCAI--CFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       187 ~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      .|.+++||.|.+  |++.|...+.|..|+ +.|++
T Consensus        12 ~h~gekpy~C~~~~C~k~F~~~~~L~~H~-r~Htg   45 (47)
T d1ncsa_          12 KEMPDKTFECLFPGCTKTFKRRYNIRSHI-QTHLE   45 (47)
T ss_dssp             EEETTTEEECCCTTCCCEECSSSSHHHHH-HHHTT
T ss_pred             hccCCCCeECCcCCCCccccCchHHHhhc-ccccC
Confidence            488888888877  888888888888888 88887

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.29  E-value=2e-07  Score=50.52  Aligned_cols=29  Identities=31%  Similarity=0.657  Sum_probs=23.6

Q ss_pred             Cceeccc--ccccccChhhHHHHhhccCCCCCC
Q psy7466         249 EVFQCTQ--CEKYYRSQSTLDVHVSKKHPAGTG  279 (338)
Q Consensus       249 ~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~~~  279 (338)
                      +||.|+.  ||+.|+..++|..| +++| +|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H-~r~H-tgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRH-KRTH-TGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHH-HTTT-SCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhh-cCcc-cccC
Confidence            5788864  99999999999999 7888 7764

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.28  E-value=8.4e-08  Score=51.61  Aligned_cols=28  Identities=36%  Similarity=0.673  Sum_probs=20.9

Q ss_pred             Cceeccc--ccccccChhhHHHHhhccCCCCC
Q psy7466         249 EVFQCTQ--CEKYYRSQSTLDVHVSKKHPAGT  278 (338)
Q Consensus       249 ~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~~  278 (338)
                      +||.|++  ||++|...+.|..| +++| +|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H-~r~H-TGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTH-VRIH-TGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHH-HHHH-HCC
T ss_pred             CCccCCCCCCCceECcHHHcCcc-cccc-CCC
Confidence            4778876  88888888888888 6677 553

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.27  E-value=2.6e-08  Score=59.97  Aligned_cols=14  Identities=21%  Similarity=0.664  Sum_probs=5.3

Q ss_pred             ccccccChhhHHHH
Q psy7466         256 CEKYYRSQSTLDVH  269 (338)
Q Consensus       256 C~k~f~~~~~L~~H  269 (338)
                      |++.|...++|..|
T Consensus        26 C~k~F~~~~~L~~H   39 (47)
T d1ncsa_          26 CTKTFKRRYNIRSH   39 (47)
T ss_dssp             CCCEECSSSSHHHH
T ss_pred             CCccccCchHHHhh
Confidence            33333333333333

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.22  E-value=3.2e-07  Score=49.20  Aligned_cols=27  Identities=44%  Similarity=0.875  Sum_probs=21.8

Q ss_pred             cceeccc--cccccCChHHHHHHHhhhccC
Q psy7466         192 SSFKCAI--CFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       192 ~~~~C~~--C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      +||.|++  ||+.|...+.|..|+ +.|++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~-r~HtG   29 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHL-RSHTG   29 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHH-HHTTT
T ss_pred             CCeeCCCCCCCceECChhHhhhhc-CcCcC
Confidence            4788877  888888888888888 78876

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.20  E-value=3.1e-07  Score=49.32  Aligned_cols=27  Identities=44%  Similarity=0.793  Sum_probs=22.2

Q ss_pred             cceeccc--cccccCChHHHHHHHhhhccC
Q psy7466         192 SSFKCAI--CFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       192 ~~~~C~~--C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      +||.|++  ||+.|...+.|..|+ +.|++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~-r~HTG   29 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHV-RIHTG   29 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHH-HHHHC
T ss_pred             CCccCCCCCCCceECcHHHcCccc-cccCC
Confidence            4788877  888888888888888 77876

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.10  E-value=8.6e-07  Score=47.96  Aligned_cols=27  Identities=33%  Similarity=0.677  Sum_probs=22.2

Q ss_pred             cceeccc--cccccCChHHHHHHHhhhccC
Q psy7466         192 SSFKCAI--CFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       192 ~~~~C~~--C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      +||.|++  ||+.|...+.|..|+ +.|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~-r~Htg   29 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHK-RTHTG   29 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHH-TTTSC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhc-Ccccc
Confidence            4788864  888888888888888 88887

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.05  E-value=4.4e-07  Score=48.16  Aligned_cols=25  Identities=20%  Similarity=0.634  Sum_probs=18.6

Q ss_pred             Cceeccc--ccccccChhhHHHHhhccC
Q psy7466         249 EVFQCTQ--CEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       249 ~~~~C~~--C~k~f~~~~~L~~H~~~~H  274 (338)
                      +||.|++  |++.|.+.+.|..| ++.|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H-~r~H   27 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRH-IRIH   27 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHH-THHH
T ss_pred             CCeECCCCCCCcEECchhHhhhh-cCcc
Confidence            4677776  77777777777777 6666

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.05  E-value=1.1e-06  Score=47.69  Aligned_cols=26  Identities=27%  Similarity=0.631  Sum_probs=17.4

Q ss_pred             CCceeccc--ccccccChhhHHHHhhccC
Q psy7466         248 HEVFQCTQ--CEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       248 ~~~~~C~~--C~k~f~~~~~L~~H~~~~H  274 (338)
                      ++||.|++  |++.|+..+.|.+| ++.|
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H-~r~H   28 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRH-KKSH   28 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHH-HGGG
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHH-hhhc
Confidence            35666766  77777777777777 6666

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=2.3e-06  Score=44.76  Aligned_cols=32  Identities=25%  Similarity=0.502  Sum_probs=27.8

Q ss_pred             CceecccccccccChhhHHHHhhccCCCCCCccc
Q psy7466         249 EVFQCTQCEKYYRSQSTLDVHVSKKHPAGTGKVK  282 (338)
Q Consensus       249 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~  282 (338)
                      +...|+.||+.|.....|.+| +..| .+++||.
T Consensus         4 k~~~ce~cgk~frdvyhlnrh-klsh-s~ekpys   35 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRH-KLSH-SGEKPYS   35 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHH-GGGS-CSCCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhh-hccc-CCCCCCC
Confidence            456799999999999999999 8899 9999883

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.98  E-value=1.3e-06  Score=46.35  Aligned_cols=27  Identities=37%  Similarity=0.726  Sum_probs=19.8

Q ss_pred             cceeccc--cccccCChHHHHHHHhhhccC
Q psy7466         192 SSFKCAI--CFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       192 ~~~~C~~--C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      +||.|++  |++.|...+.|..|+ +.|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~-r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHI-RIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHT-HHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhc-CccCC
Confidence            4677776  777777777777777 67754

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=1.3e-06  Score=45.72  Aligned_cols=25  Identities=28%  Similarity=0.689  Sum_probs=21.7

Q ss_pred             Ccccccc--ccccccChhhHHHHHHHh
Q psy7466         140 LEYQCSV--CSQVFIEKKNLSKHFFKC  164 (338)
Q Consensus       140 ~~~~C~~--C~~~f~~~~~L~~H~~~h  164 (338)
                      +||.|++  |++.|...+.|..|+++|
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            5889988  999999999999998766

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.92  E-value=3e-06  Score=46.00  Aligned_cols=27  Identities=22%  Similarity=0.407  Sum_probs=17.9

Q ss_pred             cceeccc--cccccCChHHHHHHHhhhccC
Q psy7466         192 SSFKCAI--CFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       192 ~~~~C~~--C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      +||.|++  |++.|.....|..|+ +.|..
T Consensus         2 rP~~C~~pgC~k~F~r~~~L~~H~-r~Ht~   30 (32)
T d1zfda_           2 RPYSCDHPGCDKAFVRNHDLIRHK-KSHQE   30 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHH-GGGTC
T ss_pred             cCeECcCCCCCCeeCCHHHHHHHh-hhccC
Confidence            5666766  777777777777776 66654

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.92  E-value=2.6e-06  Score=42.91  Aligned_cols=25  Identities=24%  Similarity=0.573  Sum_probs=15.4

Q ss_pred             CceecccccccccChhhHHHHhhccC
Q psy7466         249 EVFQCTQCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       249 ~~~~C~~C~k~f~~~~~L~~H~~~~H  274 (338)
                      +||.|++||+.|.......+| .++|
T Consensus         2 kPf~C~~CgrkFArsderkRH-~kiH   26 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRH-TKIH   26 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHH-HGGG
T ss_pred             CCcccchhhhhhhcchhhhhh-hhhc
Confidence            566666666666666666666 5555

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.91  E-value=3.4e-06  Score=40.99  Aligned_cols=26  Identities=42%  Similarity=0.814  Sum_probs=19.5

Q ss_pred             ceeccccccccCChHHHHHHHhhhccC
Q psy7466         193 SFKCAICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       193 ~~~C~~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      |++|+.|++.|..+..|..|+ +.|++
T Consensus         1 phkc~~c~kcfsrkdklk~hm-r~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHM-RCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHG-GGCCC
T ss_pred             CCccchhhhHhcchhHHHHHh-hccCC
Confidence            467888888888888888887 76653

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.88  E-value=4.2e-06  Score=42.12  Aligned_cols=24  Identities=25%  Similarity=0.537  Sum_probs=11.9

Q ss_pred             CceecCcCcccccChhHHHHHHHc
Q psy7466         223 EPYQCSQCSLCFDQGSLLKAHVLE  246 (338)
Q Consensus       223 ~~~~C~~C~~~f~~~~~l~~H~~~  246 (338)
                      +||.|.+||+.|.......+|.++
T Consensus         2 kPf~C~~CgrkFArsderkRH~ki   25 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRHTKI   25 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGG
T ss_pred             CCcccchhhhhhhcchhhhhhhhh
Confidence            445555555555555555555443

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.88  E-value=1.2e-06  Score=45.95  Aligned_cols=20  Identities=25%  Similarity=0.678  Sum_probs=10.3

Q ss_pred             ceeccc--ccccccChhhHHHH
Q psy7466         250 VFQCTQ--CEKYYRSQSTLDVH  269 (338)
Q Consensus       250 ~~~C~~--C~k~f~~~~~L~~H  269 (338)
                      ||.|++  ||+.|.+.++|..|
T Consensus         2 Pf~C~~~gC~K~F~~~~~L~~H   23 (28)
T d1ubdc4           2 PYVCPFDGCNKKFAQSTNLKSH   23 (28)
T ss_dssp             CCCCCSTTCCCCCSSTTTTHHH
T ss_pred             CcCCCCCCcCCcCCCHHHHHHH
Confidence            455544  55555555555555

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.82  E-value=6.3e-06  Score=40.05  Aligned_cols=24  Identities=25%  Similarity=0.621  Sum_probs=17.2

Q ss_pred             ceecccccccccChhhHHHHhhccC
Q psy7466         250 VFQCTQCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       250 ~~~C~~C~k~f~~~~~L~~H~~~~H  274 (338)
                      |.+|+.|++-|+.+..|..| ++.|
T Consensus         1 phkc~~c~kcfsrkdklk~h-mr~h   24 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTH-MRCH   24 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHH-GGGC
T ss_pred             CCccchhhhHhcchhHHHHH-hhcc
Confidence            45677777777777777777 6666

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.67  E-value=1.2e-05  Score=40.55  Aligned_cols=26  Identities=35%  Similarity=0.676  Sum_probs=20.3

Q ss_pred             CceecccccccccChhhHHHHhhccC
Q psy7466         249 EVFQCTQCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       249 ~~~~C~~C~k~f~~~~~L~~H~~~~H  274 (338)
                      +||.|.+|.+.....++|..|++..|
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkh   26 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CCccccccccccccchhhhhhhhccc
Confidence            47778888888888888888877777

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.63  E-value=2e-05  Score=39.22  Aligned_cols=28  Identities=36%  Similarity=0.681  Sum_probs=21.5

Q ss_pred             CCceecccccccccChhhHHHHhhccCCCC
Q psy7466         248 HEVFQCTQCEKYYRSQSTLDVHVSKKHPAG  277 (338)
Q Consensus       248 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~  277 (338)
                      ++||+|.+|.+.-.+.+.|..| .+.| +|
T Consensus         1 erpfkcqlcsy~srnssqltvh-lr~h-tg   28 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVH-LRSH-TG   28 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHH-HTTC-CS
T ss_pred             CCcceeeecccccCCchheEEe-eecc-cC
Confidence            4678888888888888888888 6777 54

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.61  E-value=2.4e-05  Score=40.82  Aligned_cols=31  Identities=35%  Similarity=0.658  Sum_probs=26.4

Q ss_pred             cceeccccccccCChHHHHHHHhhhccCCCCCce
Q psy7466         192 SSFKCAICFEYFSLLESLETHITRRHIGICEEPY  225 (338)
Q Consensus       192 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~  225 (338)
                      +...|..||+.|.....|.+|. ..|.+  ++||
T Consensus         4 k~~~ce~cgk~frdvyhlnrhk-lshs~--ekpy   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHK-LSHSG--EKPY   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHG-GGSCS--CCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhh-cccCC--CCCC
Confidence            3467999999999999999997 88888  8887

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.58  E-value=1.9e-05  Score=40.26  Aligned_cols=26  Identities=31%  Similarity=0.540  Sum_probs=23.1

Q ss_pred             CCccccccccccccChhhHHHHHHHh
Q psy7466         139 GLEYQCSVCSQVFIEKKNLSKHFFKC  164 (338)
Q Consensus       139 ~~~~~C~~C~~~f~~~~~L~~H~~~h  164 (338)
                      ++||.|++|+..|..+..+..|++.|
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrsh   26 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSH   26 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHH
T ss_pred             CCCcccchHHHHhhccccceEeeecc
Confidence            47899999999999999999998766

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.52  E-value=3e-05  Score=39.93  Aligned_cols=27  Identities=26%  Similarity=0.612  Sum_probs=23.1

Q ss_pred             ceecccccccccChhhHHHHhhccCCCC
Q psy7466         250 VFQCTQCEKYYRSQSTLDVHVSKKHPAG  277 (338)
Q Consensus       250 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~  277 (338)
                      ||.|.+|++.|+.+.-|.+|.++.| .|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH-~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIH-SG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTS-CC
T ss_pred             CcccccccchhhHHHHHHHHHHHHh-cC
Confidence            6889999999999999999988888 54

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.40  E-value=6.6e-05  Score=37.14  Aligned_cols=26  Identities=31%  Similarity=0.612  Sum_probs=20.6

Q ss_pred             eecccccccccChhhHHHHhhccCCCCC
Q psy7466         251 FQCTQCEKYYRSQSTLDVHVSKKHPAGT  278 (338)
Q Consensus       251 ~~C~~C~k~f~~~~~L~~H~~~~H~~~~  278 (338)
                      ..|..||+.|.-.+.|++| ..+| +++
T Consensus         3 hvc~ecgkaf~essklkrh-~lvh-tge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRH-QLVH-TGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHH-GGGT-SCC
T ss_pred             chHHHHhHHHHHHHHHHHH-hhcc-cCC
Confidence            5688888888888888888 7778 653

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.37  E-value=6.7e-05  Score=37.30  Aligned_cols=28  Identities=36%  Similarity=0.600  Sum_probs=21.6

Q ss_pred             CcceeccccccccCChHHHHHHHhhhccC
Q psy7466         191 RSSFKCAICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       191 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      ++||+|..|...-.+.+.|..|+ +.|++
T Consensus         1 erpfkcqlcsy~srnssqltvhl-r~htg   28 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHL-RSHTG   28 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHH-TTCCS
T ss_pred             CCcceeeecccccCCchheEEee-ecccC
Confidence            35788888888888888888887 77765

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.34  E-value=5.6e-05  Score=38.48  Aligned_cols=27  Identities=26%  Similarity=0.631  Sum_probs=15.3

Q ss_pred             cceeccccccccCChHHHHHHHhhhccC
Q psy7466         192 SSFKCAICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       192 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      +||.|++|+..|..+..+..|. +.|.+
T Consensus         2 kp~~cpic~qrfkrkdrmsyhv-rshdg   28 (32)
T d2epqa1           2 KPYSCPVCGLRFKRKDRMSYHV-RSHDG   28 (32)
T ss_dssp             CSSEETTTTEECSCHHHHHHHH-HHHSC
T ss_pred             CCcccchHHHHhhccccceEee-ecccC
Confidence            4555666666665555555555 55543

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.30  E-value=6.4e-05  Score=38.31  Aligned_cols=26  Identities=35%  Similarity=0.684  Sum_probs=19.0

Q ss_pred             Cceeccc--ccccccChhhHHHHhhccC
Q psy7466         249 EVFQCTQ--CEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       249 ~~~~C~~--C~k~f~~~~~L~~H~~~~H  274 (338)
                      +||.|.+  |+++|...++|+.|++..|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            4677776  7788888888888865555

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.24  E-value=5.1e-05  Score=36.98  Aligned_cols=26  Identities=38%  Similarity=0.792  Sum_probs=21.1

Q ss_pred             ecccccccccChhhHHHHhhccCCCCCC
Q psy7466         252 QCTQCEKYYRSQSTLDVHVSKKHPAGTG  279 (338)
Q Consensus       252 ~C~~C~k~f~~~~~L~~H~~~~H~~~~~  279 (338)
                      +|+.|.+.|.++..|..| .+.| +|++
T Consensus         2 qcp~c~k~f~skyylkvh-nr~h-tgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVH-NRKH-TGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHH-HHHH-SSCC
T ss_pred             cCcchHHHHHHhHhhhhc-cccc-cCCC
Confidence            688888888888888888 7778 7653

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.21  E-value=7.4e-05  Score=37.41  Aligned_cols=22  Identities=41%  Similarity=0.801  Sum_probs=20.6

Q ss_pred             ccccccccccccChhhHHHHHH
Q psy7466         141 EYQCSVCSQVFIEKKNLSKHFF  162 (338)
Q Consensus       141 ~~~C~~C~~~f~~~~~L~~H~~  162 (338)
                      ||.|..|...|.++.+|..||+
T Consensus         1 py~C~~CnF~FKTKGNLTKHmk   22 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMK   22 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHH
T ss_pred             CcccceeeeeEeeccchhHhhh
Confidence            6899999999999999999984

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.15  E-value=0.00013  Score=36.47  Aligned_cols=21  Identities=29%  Similarity=0.759  Sum_probs=10.0

Q ss_pred             eecCcCcccccChhHHHHHHH
Q psy7466         225 YQCSQCSLCFDQGSLLKAHVL  245 (338)
Q Consensus       225 ~~C~~C~~~f~~~~~l~~H~~  245 (338)
                      |.|..|..+|.++..|..||.
T Consensus         2 y~C~~CnF~FKTKGNLTKHmk   22 (29)
T d1bboa2           2 YHCTYCNFSFKTKGNLTKHMK   22 (29)
T ss_dssp             EECSSSSCEESSHHHHHHHHH
T ss_pred             cccceeeeeEeeccchhHhhh
Confidence            444444444444444444444

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.12  E-value=0.00018  Score=36.14  Aligned_cols=27  Identities=26%  Similarity=0.461  Sum_probs=16.3

Q ss_pred             ceeccccccccCChHHHHHHHhhhccC
Q psy7466         193 SFKCAICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       193 ~~~C~~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      ||.|..|.......++|..|++..|..
T Consensus         2 py~cqyc~yrsadssnlkthiktkhsk   28 (30)
T d1klra_           2 TYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             Cccccccccccccchhhhhhhhccccc
Confidence            566666666666666666666555543

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.10  E-value=9.6e-05  Score=36.90  Aligned_cols=29  Identities=17%  Similarity=0.130  Sum_probs=21.5

Q ss_pred             cccccchhhHhhhcChHHHHHHHHHhcCC
Q psy7466         111 EILLMKALDEEMFKMDEENNKEMERISQG  139 (338)
Q Consensus       111 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  139 (338)
                      +..|.|..|...|..+..|+.||..|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            34577888888888888888888777763

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.08  E-value=0.00014  Score=36.36  Aligned_cols=27  Identities=7%  Similarity=-0.191  Sum_probs=23.5

Q ss_pred             ccchhhHhhhcChHHHHHHHHHhcCCC
Q psy7466         114 LMKALDEEMFKMDEENNKEMERISQGL  140 (338)
Q Consensus       114 ~~C~~C~~~f~~~~~l~~H~~~h~~~~  140 (338)
                      |.|+.|+......+-|++|++.|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            789999999999999999999998763

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.05  E-value=0.00025  Score=35.01  Aligned_cols=25  Identities=32%  Similarity=0.441  Sum_probs=20.6

Q ss_pred             eeccccccccCChHHHHHHHhhhccC
Q psy7466         194 FKCAICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       194 ~~C~~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      +.|..||+.|...+.|++|. ..|++
T Consensus         3 hvc~ecgkaf~essklkrh~-lvhtg   27 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQ-LVHTG   27 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHG-GGTSC
T ss_pred             chHHHHhHHHHHHHHHHHHh-hcccC
Confidence            56888888888888888887 77876

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.05  E-value=0.00019  Score=34.36  Aligned_cols=23  Identities=30%  Similarity=0.791  Sum_probs=19.0

Q ss_pred             eecccccccccChhhHHHHhhccC
Q psy7466         251 FQCTQCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       251 ~~C~~C~k~f~~~~~L~~H~~~~H  274 (338)
                      |+|..|.++|..++.|.+| +++|
T Consensus         1 ykcglcersfveksalsrh-qrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRH-QRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHH-GGGT
T ss_pred             CcccchHHHHHHHHHHHHH-HHhh
Confidence            6788888888888888888 7777

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.93  E-value=0.00015  Score=36.36  Aligned_cols=26  Identities=31%  Similarity=0.551  Sum_probs=21.0

Q ss_pred             CceecccccccccChhhHHHHhhccC
Q psy7466         249 EVFQCTQCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       249 ~~~~C~~C~k~f~~~~~L~~H~~~~H  274 (338)
                      +||+|..|.......++|..|+.+.|
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H   26 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFH   26 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHHHc
Confidence            47888888888888888888877777

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.89  E-value=0.00031  Score=34.14  Aligned_cols=24  Identities=33%  Similarity=0.650  Sum_probs=21.5

Q ss_pred             eccccccccCChHHHHHHHhhhccC
Q psy7466         195 KCAICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       195 ~C~~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      +|+.|.+.|.++..|..|- +.|++
T Consensus         2 qcp~c~k~f~skyylkvhn-r~htg   25 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHN-RKHTG   25 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHH-HHHSS
T ss_pred             cCcchHHHHHHhHhhhhcc-ccccC
Confidence            6899999999999999997 88887

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.87  E-value=0.00033  Score=35.94  Aligned_cols=27  Identities=26%  Similarity=0.598  Sum_probs=19.9

Q ss_pred             ceeccccccccCChHHHHHHHhhhccC
Q psy7466         193 SFKCAICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       193 ~~~C~~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      ||.|.+|++.|.....|.+|.+..|.+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            577777777777777777777666665

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.85  E-value=0.00034  Score=35.56  Aligned_cols=21  Identities=24%  Similarity=0.678  Sum_probs=12.5

Q ss_pred             ceeccc--cccccCChHHHHHHH
Q psy7466         193 SFKCAI--CFEYFSLLESLETHI  213 (338)
Q Consensus       193 ~~~C~~--C~~~f~~~~~l~~H~  213 (338)
                      ||.|.+  |++.|...++|+.|+
T Consensus         2 PY~Ck~~gC~K~YtdPSSLRKH~   24 (29)
T d2glia5           2 PYVCKLPGCTKRYTDPSSLRKHV   24 (29)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHH
T ss_pred             CeecccCCCCcccCCHHHHHHHH
Confidence            555555  566666666666665

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.82  E-value=0.00038  Score=38.41  Aligned_cols=28  Identities=21%  Similarity=0.712  Sum_probs=24.4

Q ss_pred             cCCCccccccccccccChhhHHHHHHHh
Q psy7466         137 SQGLEYQCSVCSQVFIEKKNLSKHFFKC  164 (338)
Q Consensus       137 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h  164 (338)
                      +|.+||.|.+|++.|.-..++.+|.-.+
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~C   28 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTSC   28 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhhh
Confidence            4678999999999999999999997554

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.80  E-value=0.0004  Score=34.70  Aligned_cols=26  Identities=23%  Similarity=0.534  Sum_probs=16.7

Q ss_pred             eecccccccccChhhHHHHhhccCCCCC
Q psy7466         251 FQCTQCEKYYRSQSTLDVHVSKKHPAGT  278 (338)
Q Consensus       251 ~~C~~C~k~f~~~~~L~~H~~~~H~~~~  278 (338)
                      |.|+.||......+-|+.| .+.| +++
T Consensus         2 YvC~~Cg~~C~KPSvL~KH-IRsH-T~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKH-IRTH-TDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHH-HHHT-SSC
T ss_pred             ccccccCcccCCHHHHHHH-HHHh-cCC
Confidence            5666666666666666666 5566 543

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.78  E-value=0.00034  Score=34.41  Aligned_cols=25  Identities=24%  Similarity=0.588  Sum_probs=18.5

Q ss_pred             CceecccccccccChhhHHHHhhccC
Q psy7466         249 EVFQCTQCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       249 ~~~~C~~C~k~f~~~~~L~~H~~~~H  274 (338)
                      +||+|..|++.-...++|..| +++|
T Consensus         2 kp~kck~cdyaaadsssl~kh-~rih   26 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKH-LRIH   26 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHH-HHHS
T ss_pred             CCcccccccchhcchhhHhhh-hhcc
Confidence            577777777777777777777 6666

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.73  E-value=0.00044  Score=33.04  Aligned_cols=22  Identities=18%  Similarity=0.673  Sum_probs=10.6

Q ss_pred             ceecccccccccChhhHHHHhh
Q psy7466         250 VFQCTQCEKYYRSQSTLDVHVS  271 (338)
Q Consensus       250 ~~~C~~C~k~f~~~~~L~~H~~  271 (338)
                      ||+|.-|...|..+..|+.|+.
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            3445445555555555555433

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.69  E-value=0.00026  Score=35.23  Aligned_cols=24  Identities=33%  Similarity=0.753  Sum_probs=16.0

Q ss_pred             ceeccc--ccccccChhhHHHHhhccC
Q psy7466         250 VFQCTQ--CEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       250 ~~~C~~--C~k~f~~~~~L~~H~~~~H  274 (338)
                      ||.|+.  |++.|+..+.|++| .++|
T Consensus         3 py~c~hegcdk~fs~ps~lkrh-ekvh   28 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRH-EKVH   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHH-HHHH
T ss_pred             CccCCccCccccccCHHHHhhh-hhcc
Confidence            566665  77777777777777 5554

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.68  E-value=0.00058  Score=37.64  Aligned_cols=22  Identities=27%  Similarity=0.667  Sum_probs=10.7

Q ss_pred             CcceeccccccccCChHHHHHH
Q psy7466         191 RSSFKCAICFEYFSLLESLETH  212 (338)
Q Consensus       191 ~~~~~C~~C~~~f~~~~~l~~H  212 (338)
                      -+||.|.+|++.|-...++.+|
T Consensus         3 iKPYeC~~C~KrFMWRDSF~RH   24 (44)
T d2csha2           3 IKPYECNICAKRFMWRDSFHRH   24 (44)
T ss_dssp             CCCEECSSSCCEESCHHHHHHH
T ss_pred             CCceeccchhhhhhhHHHHHHh
Confidence            3444555555555444444444

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.66  E-value=0.00033  Score=38.47  Aligned_cols=27  Identities=7%  Similarity=0.006  Sum_probs=16.3

Q ss_pred             ccccchhhHhhhcChHHHHHHHHHhcC
Q psy7466         112 ILLMKALDEEMFKMDEENNKEMERISQ  138 (338)
Q Consensus       112 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  138 (338)
                      +.|.|.+|++.|.+..+|--||+.|..
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~   30 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRR   30 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCC
T ss_pred             CccCCCCCCCccCCcccccchHhhhcc
Confidence            346666666666666666666666544

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.65  E-value=0.00069  Score=37.17  Aligned_cols=27  Identities=26%  Similarity=0.550  Sum_probs=21.2

Q ss_pred             cceeccccccccCChHHHHHHHhhhccC
Q psy7466         192 SSFKCAICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       192 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      +.|.|.+|++.|.+..+|--|| ..|..
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~-~~Hr~   30 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHM-NVHRR   30 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHH-HTTCC
T ss_pred             CccCCCCCCCccCCcccccchH-hhhcc
Confidence            4588888888888888888887 77765

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.62  E-value=0.00064  Score=33.80  Aligned_cols=25  Identities=28%  Similarity=0.523  Sum_probs=20.6

Q ss_pred             Ccccccc--ccccccChhhHHHHHHHh
Q psy7466         140 LEYQCSV--CSQVFIEKKNLSKHFFKC  164 (338)
Q Consensus       140 ~~~~C~~--C~~~f~~~~~L~~H~~~h  164 (338)
                      .||.|+.  |++.|...+.|.+|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4788887  899999999999887655

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=96.54  E-value=0.00091  Score=31.90  Aligned_cols=23  Identities=35%  Similarity=0.702  Sum_probs=14.0

Q ss_pred             eeccccccccCChHHHHHHHhhhc
Q psy7466         194 FKCAICFEYFSLLESLETHITRRH  217 (338)
Q Consensus       194 ~~C~~C~~~f~~~~~l~~H~~~~H  217 (338)
                      |+|..|.+.|..++.|.+|+ +.|
T Consensus         1 ykcglcersfveksalsrhq-rvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQ-RVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHG-GGT
T ss_pred             CcccchHHHHHHHHHHHHHH-Hhh
Confidence            45666666666666666665 554

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.50  E-value=0.00094  Score=33.40  Aligned_cols=26  Identities=27%  Similarity=0.413  Sum_probs=17.5

Q ss_pred             ceeccccccccCChHHHHHHHhhhcc
Q psy7466         193 SFKCAICFEYFSLLESLETHITRRHI  218 (338)
Q Consensus       193 ~~~C~~C~~~f~~~~~l~~H~~~~H~  218 (338)
                      ||+|.+|..-....++|..|++..|.
T Consensus         2 PFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           2 PFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CcccceecccccCcchHHHHHHHHcc
Confidence            67777777777777777777655553

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.41  E-value=0.0012  Score=32.35  Aligned_cols=26  Identities=31%  Similarity=0.473  Sum_probs=16.4

Q ss_pred             cceeccccccccCChHHHHHHHhhhcc
Q psy7466         192 SSFKCAICFEYFSLLESLETHITRRHI  218 (338)
Q Consensus       192 ~~~~C~~C~~~f~~~~~l~~H~~~~H~  218 (338)
                      +||+|..|...-...++|..|+ +.|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~-rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHL-RIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHH-HHSC
T ss_pred             CCcccccccchhcchhhHhhhh-hccc
Confidence            4666666666666666666666 5553

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.31  E-value=0.0016  Score=32.38  Aligned_cols=27  Identities=33%  Similarity=0.674  Sum_probs=21.1

Q ss_pred             cceeccccccccCChHHHHHHHhhhccC
Q psy7466         192 SSFKCAICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       192 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      ..|.|..|...|...-.|+.|| ..|++
T Consensus         3 qvftcs~cqe~f~rrmelr~hm-vshtg   29 (30)
T d2dlqa3           3 QVFTCSVCQETFRRRMELRLHM-VSHTG   29 (30)
T ss_dssp             CCEECSSSCCEESSHHHHHHHH-HHHSS
T ss_pred             ceEEeHHHHHHHHHHHhheeee-ecccC
Confidence            3578888888888888888888 77766

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.29  E-value=0.0014  Score=31.21  Aligned_cols=21  Identities=29%  Similarity=0.754  Sum_probs=13.2

Q ss_pred             ceeccccccccCChHHHHHHH
Q psy7466         193 SFKCAICFEYFSLLESLETHI  213 (338)
Q Consensus       193 ~~~C~~C~~~f~~~~~l~~H~  213 (338)
                      ||+|..|...|-.+..|..||
T Consensus         2 pykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHH
Confidence            566666666666666666665

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.25  E-value=0.00094  Score=34.21  Aligned_cols=26  Identities=23%  Similarity=0.598  Sum_probs=17.1

Q ss_pred             Cceeccc--ccccccChhhHHHHhhccC
Q psy7466         249 EVFQCTQ--CEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       249 ~~~~C~~--C~k~f~~~~~L~~H~~~~H  274 (338)
                      +||.|++  |.+.|++.+.-..|..+.|
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTH   28 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTH   28 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTT
T ss_pred             CCccccCCChhhhhcchhhhhhhccccc
Confidence            4666666  7777777777677744666

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.07  E-value=0.002  Score=34.98  Aligned_cols=27  Identities=26%  Similarity=0.565  Sum_probs=21.8

Q ss_pred             CCCcccccc--ccccccChhhHHHHHHHh
Q psy7466         138 QGLEYQCSV--CSQVFIEKKNLSKHFFKC  164 (338)
Q Consensus       138 ~~~~~~C~~--C~~~f~~~~~L~~H~~~h  164 (338)
                      .++||.|..  |+.+|.+...|..|...|
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhh
Confidence            467888855  899999998888887665

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.98  E-value=0.00096  Score=33.31  Aligned_cols=25  Identities=40%  Similarity=0.707  Sum_probs=16.2

Q ss_pred             Cceeccc--ccccccChhhHHHHhhccC
Q psy7466         249 EVFQCTQ--CEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       249 ~~~~C~~--C~k~f~~~~~L~~H~~~~H  274 (338)
                      +||.|..  |.+.|.+...|.+| ...|
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrh-s~th   27 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRH-SLTH   27 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHH-HHHH
T ss_pred             CCcCcccccccccchhhhhhhhh-hccc
Confidence            3566655  77777777777777 5555

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.91  E-value=0.0021  Score=30.75  Aligned_cols=24  Identities=25%  Similarity=0.603  Sum_probs=19.4

Q ss_pred             eecccccccccChhhHHHHhhccC
Q psy7466         251 FQCTQCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       251 ~~C~~C~k~f~~~~~L~~H~~~~H  274 (338)
                      |.|+.|-+.|..+.++..|++..|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            778888888888888888877666

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.68  E-value=0.002  Score=35.00  Aligned_cols=26  Identities=35%  Similarity=0.770  Sum_probs=15.5

Q ss_pred             CCceeccc--ccccccChhhHHHHhhccC
Q psy7466         248 HEVFQCTQ--CEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       248 ~~~~~C~~--C~k~f~~~~~L~~H~~~~H  274 (338)
                      ++||.|..  |+.+|.+...|..| +..|
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vH-k~KH   31 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVH-KHKH   31 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHH-HHHH
T ss_pred             CCceecCCCCccccccchHHHHHh-hhhh
Confidence            45666633  66666666666666 5555

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.56  E-value=0.0035  Score=30.81  Aligned_cols=24  Identities=25%  Similarity=0.591  Sum_probs=19.3

Q ss_pred             ceecccccccccChhhHHHHhhccC
Q psy7466         250 VFQCTQCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       250 ~~~C~~C~k~f~~~~~L~~H~~~~H  274 (338)
                      |-+|+.|.++.+++..|+.| .++|
T Consensus         2 pekc~ecsyscsskaalrvh-~rih   25 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIH-ERIH   25 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHH-HGGG
T ss_pred             CccCcccccccCcHHHHHHh-hccc
Confidence            55788888888888888888 7777

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.55  E-value=0.0039  Score=30.55  Aligned_cols=25  Identities=36%  Similarity=0.806  Sum_probs=19.8

Q ss_pred             ceecccccccccChhhHHHHhhccC
Q psy7466         250 VFQCTQCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       250 ~~~C~~C~k~f~~~~~L~~H~~~~H  274 (338)
                      .|+|+.|+-....++.|..|++..|
T Consensus         2 k~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHTS
T ss_pred             CccCCcchhheeehhhhhHHhhhcc
Confidence            4778888888888888888877766

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.45  E-value=0.0053  Score=30.04  Aligned_cols=26  Identities=23%  Similarity=0.537  Sum_probs=21.3

Q ss_pred             ceeccccccccCChHHHHHHHhhhcc
Q psy7466         193 SFKCAICFEYFSLLESLETHITRRHI  218 (338)
Q Consensus       193 ~~~C~~C~~~f~~~~~l~~H~~~~H~  218 (338)
                      .|.|+.|+-....++.|+.|++..|.
T Consensus         2 k~qcphc~tiiarksdlrvhlrnlhs   27 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQHS   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CccCCcchhheeehhhhhHHhhhccc
Confidence            37899999999999999999866553

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.39  E-value=0.0039  Score=30.43  Aligned_cols=21  Identities=29%  Similarity=0.790  Sum_probs=19.5

Q ss_pred             ccccccccccccChhhHHHHH
Q psy7466         141 EYQCSVCSQVFIEKKNLSKHF  161 (338)
Q Consensus       141 ~~~C~~C~~~f~~~~~L~~H~  161 (338)
                      ||+|..||+.+..+.+|..|.
T Consensus         1 pf~c~kcgkcyfrkenllehe   21 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHE   21 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHH
Confidence            689999999999999999996

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.35  E-value=0.0034  Score=32.09  Aligned_cols=26  Identities=27%  Similarity=0.488  Sum_probs=15.2

Q ss_pred             ceeccc--cccccCChHHHHHHHhhhcc
Q psy7466         193 SFKCAI--CFEYFSLLESLETHITRRHI  218 (338)
Q Consensus       193 ~~~C~~--C~~~f~~~~~l~~H~~~~H~  218 (338)
                      ||.|.+  |.+.|.+.+.-..|+.+.|.
T Consensus         2 PY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           2 PYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CccccCCChhhhhcchhhhhhhcccccc
Confidence            566655  66666666666666545554

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.26  E-value=0.0047  Score=30.14  Aligned_cols=20  Identities=35%  Similarity=0.735  Sum_probs=16.2

Q ss_pred             ceecccccccccChhhHHHH
Q psy7466         250 VFQCTQCEKYYRSQSTLDVH  269 (338)
Q Consensus       250 ~~~C~~C~k~f~~~~~L~~H  269 (338)
                      ||.|..||+.|-.+.+|..|
T Consensus         1 pf~c~kcgkcyfrkenlleh   20 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEH   20 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHH
Confidence            57888888888888888887

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.06  E-value=0.0062  Score=30.31  Aligned_cols=27  Identities=33%  Similarity=0.595  Sum_probs=18.0

Q ss_pred             cceeccc--cccccCChHHHHHHHhhhccC
Q psy7466         192 SSFKCAI--CFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       192 ~~~~C~~--C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      +||.|..  |.+.|.+...|.+|. ..|++
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs-~thtg   29 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHS-LTHTG   29 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHH-HHHHT
T ss_pred             CCcCcccccccccchhhhhhhhhh-ccccC
Confidence            3566655  777777777777776 66654

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.17  E-value=0.019  Score=28.14  Aligned_cols=25  Identities=32%  Similarity=0.352  Sum_probs=18.5

Q ss_pred             ceeccccccccCChHHHHHHHhhhcc
Q psy7466         193 SFKCAICFEYFSLLESLETHITRRHI  218 (338)
Q Consensus       193 ~~~C~~C~~~f~~~~~l~~H~~~~H~  218 (338)
                      |-+|+.|.....++..|+.|. +.|.
T Consensus         2 pekc~ecsyscsskaalrvh~-rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHE-RIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHH-GGGC
T ss_pred             CccCcccccccCcHHHHHHhh-cccc
Confidence            457778888888888888887 6664

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.12  E-value=0.012  Score=30.74  Aligned_cols=20  Identities=30%  Similarity=0.803  Sum_probs=15.9

Q ss_pred             ceecccccccccChhhHHHH
Q psy7466         250 VFQCTQCEKYYRSQSTLDVH  269 (338)
Q Consensus       250 ~~~C~~C~k~f~~~~~L~~H  269 (338)
                      .|.|..||+.|..+..+.+|
T Consensus         4 afvcskcgktftrrntm~rh   23 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARH   23 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHH
T ss_pred             eeeecccccchhcchHHHHH
Confidence            47788888888888888887

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.10  E-value=0.0069  Score=34.51  Aligned_cols=24  Identities=25%  Similarity=0.665  Sum_probs=21.8

Q ss_pred             ceecccccccccChhhHHHHhhccC
Q psy7466         250 VFQCTQCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       250 ~~~C~~C~k~f~~~~~L~~H~~~~H  274 (338)
                      .|.|..|||.|+....|+.| ...|
T Consensus         6 l~pCG~CgK~Ftd~~rLr~H-EAQH   29 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQH-EAQH   29 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHH-HHHH
T ss_pred             eeeccccccccCCHHHHhHh-HHhc
Confidence            58899999999999999999 8888

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.95  E-value=0.014  Score=28.98  Aligned_cols=25  Identities=36%  Similarity=0.735  Sum_probs=22.0

Q ss_pred             ceecccccccccChhhHHHHhhccC
Q psy7466         250 VFQCTQCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       250 ~~~C~~C~k~f~~~~~L~~H~~~~H  274 (338)
                      .|.|..||+...+...++.|++..|
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmadh   26 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMANH   26 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHT
T ss_pred             ceechhHHHHHhhccCceEEEeecc
Confidence            4789999999999999999988888

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.77  E-value=0.024  Score=26.94  Aligned_cols=24  Identities=25%  Similarity=0.775  Sum_probs=14.6

Q ss_pred             eeccccccccCChHHHHHHHhhhc
Q psy7466         194 FKCAICFEYFSLLESLETHITRRH  217 (338)
Q Consensus       194 ~~C~~C~~~f~~~~~l~~H~~~~H  217 (338)
                      |.|+.|-+.|..+.++..|.+..|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            566666666666666666654433

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=93.29  E-value=0.03  Score=28.84  Aligned_cols=20  Identities=40%  Similarity=0.747  Sum_probs=12.2

Q ss_pred             ceecccccccccChhhHHHH
Q psy7466         250 VFQCTQCEKYYRSQSTLDVH  269 (338)
Q Consensus       250 ~~~C~~C~k~f~~~~~L~~H  269 (338)
                      .|.|.-||-.|++.+.|..|
T Consensus         8 rf~c~pcgirfss~stleah   27 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAH   27 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHH
T ss_pred             ceeccccceeecChhHHHhh
Confidence            35566666666666666666

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.18  E-value=0.025  Score=29.44  Aligned_cols=24  Identities=21%  Similarity=0.560  Sum_probs=19.8

Q ss_pred             CceecCcCcccccChhHHHHHHHc
Q psy7466         223 EPYQCSQCSLCFDQGSLLKAHVLE  246 (338)
Q Consensus       223 ~~~~C~~C~~~f~~~~~l~~H~~~  246 (338)
                      ..|.|..|++.|.....+.+|...
T Consensus         3 ~afvcskcgktftrrntm~rha~n   26 (37)
T d1x6ha1           3 AAFVCSKCGKTFTRRNTMARHADN   26 (37)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHHH
T ss_pred             ceeeecccccchhcchHHHHHhhh
Confidence            468899999999999999888654

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.71  E-value=0.027  Score=32.02  Aligned_cols=27  Identities=22%  Similarity=0.396  Sum_probs=22.7

Q ss_pred             cceeccccccccCChHHHHHHHhhhccC
Q psy7466         192 SSFKCAICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       192 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      ..|.|..||+.|.....|+.|. ..|..
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HE-AQHG~   31 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHE-AQHGV   31 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHH-HHHTT
T ss_pred             ceeeccccccccCCHHHHhHhH-HhcCc
Confidence            3588999999999999999997 77743

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.30  E-value=0.052  Score=26.60  Aligned_cols=22  Identities=23%  Similarity=0.700  Sum_probs=15.9

Q ss_pred             cccc--ccccccChhhHHHHHHHh
Q psy7466         143 QCSV--CSQVFIEKKNLSKHFFKC  164 (338)
Q Consensus       143 ~C~~--C~~~f~~~~~L~~H~~~h  164 (338)
                      .|+.  |++.|...+.++.|+-+|
T Consensus         3 ~CphkgC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           3 ACPHKGCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             ECCSTTCCCEESSHHHHHHHHGGG
T ss_pred             cCCcccHHHHhhchHHHHHHhhcc
Confidence            3554  888888888888887544

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=91.04  E-value=0.052  Score=28.31  Aligned_cols=27  Identities=22%  Similarity=0.567  Sum_probs=21.0

Q ss_pred             CCceecccccccccChhhHHHHhhccC
Q psy7466         248 HEVFQCTQCEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       248 ~~~~~C~~C~k~f~~~~~L~~H~~~~H  274 (338)
                      ...|.|.+|.+.+...+++.+|....|
T Consensus         6 ~~~yRC~~C~r~YTHISNFCRHyvtSH   32 (37)
T d2drpa1           6 EHTYRCKVCSRVYTHISNFCRHYVTSH   32 (37)
T ss_dssp             TTEEECTTTCCEESSHHHHHHHHHHHS
T ss_pred             CcEEEeehhhHHHHHHHHHHHHHHhhc
Confidence            446788888888888888888877777

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.71  E-value=0.093  Score=31.93  Aligned_cols=33  Identities=21%  Similarity=0.447  Sum_probs=27.2

Q ss_pred             CCccccccccccccChhhHHHHHHHhhhhhhhh
Q psy7466         139 GLEYQCSVCSQVFIEKKNLSKHFFKCLMKFTQK  171 (338)
Q Consensus       139 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~f~~~  171 (338)
                      ...|+|..|.-.|.+...|..|+..|+..|...
T Consensus        16 s~~yQC~HCd~K~~s~~el~~hl~~hneefqkr   48 (75)
T d1x6fa1          16 NSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKR   48 (75)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHHHHHHHHHHH
T ss_pred             CceeeechhHHHHhhHHHHHHHHHhccHHHHHH
Confidence            346899999999999999999998887777654

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.30  E-value=0.11  Score=25.71  Aligned_cols=26  Identities=23%  Similarity=0.483  Sum_probs=20.4

Q ss_pred             ceeccccccccCChHHHHHHHhhhcc
Q psy7466         193 SFKCAICFEYFSLLESLETHITRRHI  218 (338)
Q Consensus       193 ~~~C~~C~~~f~~~~~l~~H~~~~H~  218 (338)
                      .|.|..||+...+...++.|+...|.
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmadhn   27 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMANHN   27 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             ceechhHHHHHhhccCceEEEeeccc
Confidence            37888899888888888888755554

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=89.84  E-value=0.084  Score=27.12  Aligned_cols=22  Identities=36%  Similarity=0.522  Sum_probs=19.3

Q ss_pred             cceeccccccccCChHHHHHHH
Q psy7466         192 SSFKCAICFEYFSLLESLETHI  213 (338)
Q Consensus       192 ~~~~C~~C~~~f~~~~~l~~H~  213 (338)
                      ..|.|.-||-.|.+.+.|..|+
T Consensus         7 arf~c~pcgirfss~stleahq   28 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHT
T ss_pred             cceeccccceeecChhHHHhhh
Confidence            3588999999999999999986

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=89.77  E-value=0.19  Score=28.25  Aligned_cols=31  Identities=23%  Similarity=0.560  Sum_probs=24.2

Q ss_pred             CCCcceeccccccccCChHHHHHHHhhhccC
Q psy7466         189 SGRSSFKCAICFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       189 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      ..+.|-.|++|+.+.....+|++|+...|..
T Consensus        20 ~s~qpatcpic~avirqsrnlrrhlel~hf~   50 (54)
T d1yuja_          20 QSEQPATCPICYAVIRQSRNLRRHLELRHFA   50 (54)
T ss_dssp             TTSCCEECTTTCCEESSHHHHHHHHHHHTSC
T ss_pred             cccCCCCCchHHHHHHHHHHHHHHHHHHhhc
Confidence            3456788888988888888888888666654

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.40  E-value=0.051  Score=33.51  Aligned_cols=36  Identities=31%  Similarity=0.630  Sum_probs=18.4

Q ss_pred             CcceeccccccccCChHHHHHHHhhhccCCCCCceecCcCcc
Q psy7466         191 RSSFKCAICFEYFSLLESLETHITRRHIGICEEPYQCSQCSL  232 (338)
Q Consensus       191 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~C~~C~~  232 (338)
                      ...|.|+.|+++|.....+..    .-..  ...|.|.+|+.
T Consensus        12 ~~~y~Cp~C~~~ys~Lda~~L----~d~~--~~~F~C~~C~~   47 (62)
T d1vd4a_          12 RASFKCPVCSSTFTDLEANQL----FDPM--TGTFRCTFCHT   47 (62)
T ss_dssp             SSEEECSSSCCEEEHHHHHHH----EETT--TTEEBCSSSCC
T ss_pred             CCceECCCCCCCcchhhHHHh----cCcC--CCeEEecCCCC
Confidence            345666666666655444332    1111  34566666654

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.17  E-value=0.11  Score=25.61  Aligned_cols=19  Identities=21%  Similarity=0.567  Sum_probs=14.9

Q ss_pred             ccccccChhhHHHHhhccC
Q psy7466         256 CEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       256 C~k~f~~~~~L~~H~~~~H  274 (338)
                      ||+.|+++..|..|.+..|
T Consensus         8 c~kifsnrqylnhh~kyqh   26 (30)
T d2dlka1           8 CGRIFSNRQYLNHHKKYQH   26 (30)
T ss_dssp             TCCEESSHHHHHHHHHHGG
T ss_pred             chhhhccHHHHHhHHHHHH
Confidence            8888888888888866555

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=89.11  E-value=0.12  Score=24.83  Aligned_cols=23  Identities=30%  Similarity=0.739  Sum_probs=17.2

Q ss_pred             ccccc--ccccccChhhHHHHHHHh
Q psy7466         142 YQCSV--CSQVFIEKKNLSKHFFKC  164 (338)
Q Consensus       142 ~~C~~--C~~~f~~~~~L~~H~~~h  164 (338)
                      |.|..  |++.|.....|..|..+|
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~h   26 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSH   26 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeecc
Confidence            45654  888888888888887554

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=88.70  E-value=0.14  Score=28.90  Aligned_cols=32  Identities=6%  Similarity=-0.019  Sum_probs=24.7

Q ss_pred             cccccccchhhHhhhcChHHHHHHHHHhcCCC
Q psy7466         109 KDEILLMKALDEEMFKMDEENNKEMERISQGL  140 (338)
Q Consensus       109 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  140 (338)
                      ..+.+-.|++|+.......+|++|+...+-.+
T Consensus        20 ~s~qpatcpic~avirqsrnlrrhlel~hf~k   51 (54)
T d1yuja_          20 QSEQPATCPICYAVIRQSRNLRRHLELRHFAK   51 (54)
T ss_dssp             TTSCCEECTTTCCEESSHHHHHHHHHHHTSCS
T ss_pred             cccCCCCCchHHHHHHHHHHHHHHHHHHhhcc
Confidence            34667789999999999999999987755443

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.46  E-value=0.083  Score=27.79  Aligned_cols=21  Identities=19%  Similarity=0.066  Sum_probs=17.1

Q ss_pred             hHhhhcChHHHHHHHHHhcCC
Q psy7466         119 DEEMFKMDEENNKEMERISQG  139 (338)
Q Consensus       119 C~~~f~~~~~l~~H~~~h~~~  139 (338)
                      =++.|.....|..||+.|+++
T Consensus        13 ~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          13 ELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCcchhHHHHHHHHhhcCCC
Confidence            346688899999999999874

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.41  E-value=0.094  Score=32.25  Aligned_cols=38  Identities=21%  Similarity=0.439  Sum_probs=27.8

Q ss_pred             CCceecCcCcccccChhHHHHHHHcCCCceecccccccc
Q psy7466         222 EEPYQCSQCSLCFDQGSLLKAHVLEKHEVFQCTQCEKYY  260 (338)
Q Consensus       222 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~C~~C~k~f  260 (338)
                      ...|.|+.|+++|.....+.. +-.....|.|..|+-..
T Consensus        12 ~~~y~Cp~C~~~ys~Lda~~L-~d~~~~~F~C~~C~~el   49 (62)
T d1vd4a_          12 RASFKCPVCSSTFTDLEANQL-FDPMTGTFRCTFCHTEV   49 (62)
T ss_dssp             SSEEECSSSCCEEEHHHHHHH-EETTTTEEBCSSSCCBC
T ss_pred             CCceECCCCCCCcchhhHHHh-cCcCCCeEEecCCCCEE
Confidence            356999999999988765543 22255689999998543

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.20  E-value=0.084  Score=33.08  Aligned_cols=21  Identities=24%  Similarity=0.812  Sum_probs=16.3

Q ss_pred             ceecccccccccChhhHHHHh
Q psy7466         250 VFQCTQCEKYYRSQSTLDVHV  270 (338)
Q Consensus       250 ~~~C~~C~k~f~~~~~L~~H~  270 (338)
                      .|.|..|++.|.+...|..|+
T Consensus        15 qfYCv~C~K~F~se~~l~~H~   35 (67)
T d1zr9a1          15 LHRCLACARYFIDSTNLKTHF   35 (67)
T ss_dssp             CSEETTTTEECSSHHHHHHHT
T ss_pred             EEecccccCccCCHHHHHHHH
Confidence            477888888888888888884

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=87.54  E-value=0.19  Score=25.22  Aligned_cols=27  Identities=22%  Similarity=0.580  Sum_probs=20.9

Q ss_pred             cceeccc--cccccCChHHHHHHHhhhccC
Q psy7466         192 SSFKCAI--CFEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       192 ~~~~C~~--C~~~f~~~~~l~~H~~~~H~~  219 (338)
                      +.|.|.+  |+..|.....|..|+ -.|++
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHL-ckHTG   30 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHL-SKHTG   30 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHH-HHHHC
T ss_pred             CceEeeCCCcchhhccchhhhHHh-hhhcC
Confidence            3477765  888888888888888 77776

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=87.07  E-value=0.11  Score=26.16  Aligned_cols=24  Identities=29%  Similarity=0.606  Sum_probs=15.1

Q ss_pred             ceeccc--ccccccChhhHHHHhhccC
Q psy7466         250 VFQCTQ--CEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       250 ~~~C~~--C~k~f~~~~~L~~H~~~~H  274 (338)
                      .|.|..  |+..|.....|..| .-.|
T Consensus         3 ~~iCsf~dC~A~ynk~wkL~AH-LckH   28 (31)
T d1tf3a1           3 RYICSFADCGAAYNKNWKLQAH-LSKH   28 (31)
T ss_dssp             CEECSSGGGCCEESSHHHHHHH-HHHH
T ss_pred             ceEeeCCCcchhhccchhhhHH-hhhh
Confidence            456654  66677766667766 5555

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=86.72  E-value=0.25  Score=25.65  Aligned_cols=29  Identities=17%  Similarity=0.627  Sum_probs=21.5

Q ss_pred             CCcceeccccccccCChHHHHHHHhhhcc
Q psy7466         190 GRSSFKCAICFEYFSLLESLETHITRRHI  218 (338)
Q Consensus       190 ~~~~~~C~~C~~~f~~~~~l~~H~~~~H~  218 (338)
                      ++..|.|.+|.+++...+++-+|....|.
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvtSHk   33 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVTSHK   33 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHHSS
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHhhcc
Confidence            34468888888888888888888755554

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.53  E-value=0.33  Score=23.65  Aligned_cols=18  Identities=22%  Similarity=0.554  Sum_probs=13.3

Q ss_pred             cccccCChHHHHHHHhhhc
Q psy7466         199 CFEYFSLLESLETHITRRH  217 (338)
Q Consensus       199 C~~~f~~~~~l~~H~~~~H  217 (338)
                      |++.|...++++.|+ -.|
T Consensus         9 C~K~Frd~saMRKHl-htH   26 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHL-HTH   26 (28)
T ss_dssp             CCCEESSHHHHHHHH-GGG
T ss_pred             HHHHhhchHHHHHHh-hcc
Confidence            777788777777776 555

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=86.26  E-value=0.13  Score=24.73  Aligned_cols=23  Identities=30%  Similarity=0.736  Sum_probs=14.8

Q ss_pred             eeccc--ccccccChhhHHHHhhccC
Q psy7466         251 FQCTQ--CEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       251 ~~C~~--C~k~f~~~~~L~~H~~~~H  274 (338)
                      |.|..  |++.|.....|+.| +-.|
T Consensus         2 yvchfe~c~kafkkhnqlkvh-qf~h   26 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVH-QFSH   26 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHH-HHHH
T ss_pred             eEEEecCchHHHhhccceEEE-eecc
Confidence            45543  77777777777777 5444

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=86.17  E-value=0.25  Score=24.30  Aligned_cols=25  Identities=20%  Similarity=0.671  Sum_probs=18.2

Q ss_pred             ceeccc--ccccccChhhHHHHhhccC
Q psy7466         250 VFQCTQ--CEKYYRSQSTLDVHVSKKH  274 (338)
Q Consensus       250 ~~~C~~--C~k~f~~~~~L~~H~~~~H  274 (338)
                      .|.|+-  |+-.|.++.++..|..+.|
T Consensus         2 nf~cdsd~cdl~fttkanmkkhfnrfh   28 (31)
T d1tf3a3           2 NFTCDSDGCDLRFTTKANMKKHFNRFH   28 (31)
T ss_dssp             CEECSSSSCCCEESSHHHHHHHHHHHT
T ss_pred             CccccCCCcceEEeehHHHHHHHhhhc
Confidence            356653  7788888888888877766

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.72  E-value=0.44  Score=23.33  Aligned_cols=20  Identities=35%  Similarity=0.469  Sum_probs=13.9

Q ss_pred             cccccCChHHHHHHHhhhcc
Q psy7466         199 CFEYFSLLESLETHITRRHI  218 (338)
Q Consensus       199 C~~~f~~~~~l~~H~~~~H~  218 (338)
                      ||+.|.+...|.-|.+-.|.
T Consensus         8 c~kifsnrqylnhh~kyqh~   27 (30)
T d2dlka1           8 CGRIFSNRQYLNHHKKYQHI   27 (30)
T ss_dssp             TCCEESSHHHHHHHHHHGGG
T ss_pred             chhhhccHHHHHhHHHHHHh
Confidence            77777777777777655554

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=84.93  E-value=0.41  Score=23.53  Aligned_cols=24  Identities=29%  Similarity=0.611  Sum_probs=16.1

Q ss_pred             eeccc--cccccCChHHHHHHHhhhc
Q psy7466         194 FKCAI--CFEYFSLLESLETHITRRH  217 (338)
Q Consensus       194 ~~C~~--C~~~f~~~~~l~~H~~~~H  217 (338)
                      |.|..  |+..|.++.++..|..+.|
T Consensus         3 f~cdsd~cdl~fttkanmkkhfnrfh   28 (31)
T d1tf3a3           3 FTCDSDGCDLRFTTKANMKKHFNRFH   28 (31)
T ss_dssp             EECSSSSCCCEESSHHHHHHHHHHHT
T ss_pred             ccccCCCcceEEeehHHHHHHHhhhc
Confidence            56643  7777777777777765555

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.87  E-value=0.17  Score=31.58  Aligned_cols=23  Identities=30%  Similarity=0.600  Sum_probs=17.4

Q ss_pred             CcceeccccccccCChHHHHHHH
Q psy7466         191 RSSFKCAICFEYFSLLESLETHI  213 (338)
Q Consensus       191 ~~~~~C~~C~~~f~~~~~l~~H~  213 (338)
                      ...|-|..|++.|.+...|..|+
T Consensus        13 ~gqfYCv~C~K~F~se~~l~~H~   35 (67)
T d1zr9a1          13 GGLHRCLACARYFIDSTNLKTHF   35 (67)
T ss_dssp             GGCSEETTTTEECSSHHHHHHHT
T ss_pred             CCEEecccccCccCCHHHHHHHH
Confidence            34577888888888888888776

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=82.71  E-value=0.31  Score=26.40  Aligned_cols=8  Identities=38%  Similarity=0.932  Sum_probs=4.0

Q ss_pred             eecccccc
Q psy7466         194 FKCAICFE  201 (338)
Q Consensus       194 ~~C~~C~~  201 (338)
                      |.|.+||.
T Consensus         6 ~~C~vCG~   13 (37)
T d1nnqa2           6 YICPICGY   13 (37)
T ss_dssp             EECTTTCC
T ss_pred             EECCCCCC
Confidence            45555553

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=82.22  E-value=0.37  Score=25.93  Aligned_cols=8  Identities=38%  Similarity=0.712  Sum_probs=4.0

Q ss_pred             ceeccccc
Q psy7466         193 SFKCAICF  200 (338)
Q Consensus       193 ~~~C~~C~  200 (338)
                      .|.|.+||
T Consensus         5 ~~vC~vCG   12 (36)
T d1yuza2           5 FHLCPICG   12 (36)
T ss_dssp             EEECSSSC
T ss_pred             EEECCCCC
Confidence            34555555

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.98  E-value=0.37  Score=25.22  Aligned_cols=19  Identities=37%  Similarity=0.553  Sum_probs=16.7

Q ss_pred             ccccCChHHHHHHHhhhccC
Q psy7466         200 FEYFSLLESLETHITRRHIG  219 (338)
Q Consensus       200 ~~~f~~~~~l~~H~~~~H~~  219 (338)
                      ++.|.....|..|| +.|++
T Consensus        14 ~~pf~a~YkLv~H~-R~HTg   32 (33)
T d2glia2          14 LRPFKAQYMLVVHM-RRHTG   32 (33)
T ss_dssp             TCCCSSHHHHHHHT-HHHHC
T ss_pred             CCcchhHHHHHHHH-hhcCC
Confidence            46699999999999 89987